Query 011783
Match_columns 477
No_of_seqs 463 out of 1234
Neff 11.1
Searched_HMMs 46136
Date Fri Mar 29 05:11:12 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/011783.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/011783hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 COG2814 AraJ Arabinose efflux 100.0 4.1E-39 9E-44 291.2 37.8 379 36-473 8-388 (394)
2 PRK09556 uhpT sugar phosphate 100.0 3.1E-38 6.8E-43 307.2 31.0 408 41-469 29-447 (467)
3 COG2271 UhpC Sugar phosphate p 100.0 2.5E-38 5.5E-43 281.5 24.6 397 35-469 23-432 (448)
4 PRK11663 regulatory protein Uh 100.0 8.6E-37 1.9E-41 294.2 36.5 395 40-469 22-422 (434)
5 PRK03545 putative arabinose tr 100.0 3E-36 6.6E-41 287.1 37.2 370 39-469 7-378 (390)
6 TIGR01299 synapt_SV2 synaptic 100.0 3.5E-36 7.6E-41 299.0 37.8 410 40-476 166-737 (742)
7 PRK14995 methyl viologen resis 100.0 7.3E-36 1.6E-40 292.1 39.4 375 40-436 5-413 (495)
8 TIGR02332 HpaX 4-hydroxyphenyl 100.0 7E-37 1.5E-41 292.4 31.4 396 37-460 4-410 (412)
9 PRK11551 putative 3-hydroxyphe 100.0 4.5E-36 9.9E-41 287.9 35.6 378 38-469 12-394 (406)
10 TIGR00893 2A0114 d-galactonate 100.0 3.3E-36 7.2E-41 288.5 32.7 388 50-469 3-397 (399)
11 TIGR00903 2A0129 major facilit 100.0 6.5E-36 1.4E-40 279.6 33.5 355 53-468 3-362 (368)
12 PRK09705 cynX putative cyanate 100.0 2E-35 4.3E-40 280.9 36.2 358 58-476 26-385 (393)
13 PRK12307 putative sialic acid 100.0 1.9E-35 4E-40 285.6 35.3 362 38-437 15-384 (426)
14 PRK10406 alpha-ketoglutarate t 100.0 7.7E-35 1.7E-39 280.7 38.7 386 40-469 21-422 (432)
15 TIGR00891 2A0112 putative sial 100.0 3.9E-35 8.4E-40 281.8 33.9 379 36-437 7-391 (405)
16 PRK10213 nepI ribonucleoside t 100.0 3.6E-34 7.8E-39 272.0 39.9 366 39-467 18-387 (394)
17 PRK10642 proline/glycine betai 100.0 1.9E-34 4.1E-39 282.0 38.9 404 40-475 15-432 (490)
18 PRK05122 major facilitator sup 100.0 2.5E-34 5.5E-39 275.1 38.4 365 39-469 13-387 (399)
19 PRK11273 glpT sn-glycerol-3-ph 100.0 7.9E-35 1.7E-39 282.1 34.9 396 44-475 32-439 (452)
20 TIGR00890 2A0111 Oxalate/Forma 100.0 5.5E-35 1.2E-39 278.0 31.9 360 52-464 14-375 (377)
21 PRK03633 putative MFS family t 100.0 6E-34 1.3E-38 270.3 38.3 365 40-469 5-370 (381)
22 PRK09952 shikimate transporter 100.0 1.1E-33 2.5E-38 272.5 39.2 395 40-476 21-436 (438)
23 TIGR00879 SP MFS transporter, 100.0 5.7E-35 1.2E-39 287.2 29.8 400 45-475 32-473 (481)
24 PRK03699 putative transporter; 100.0 8.4E-34 1.8E-38 270.4 36.8 370 39-466 5-375 (394)
25 PRK10091 MFS transport protein 100.0 1E-33 2.2E-38 268.7 36.5 369 41-469 3-374 (382)
26 TIGR00900 2A0121 H+ Antiporter 100.0 2.4E-34 5.1E-39 272.4 32.0 355 45-437 3-364 (365)
27 PRK10504 putative transporter; 100.0 1.8E-33 3.9E-38 275.0 38.0 377 40-439 9-418 (471)
28 PRK12382 putative transporter; 100.0 2.2E-33 4.8E-38 267.8 37.4 364 40-469 14-387 (392)
29 TIGR00711 efflux_EmrB drug res 100.0 8.2E-34 1.8E-38 279.0 35.1 375 42-436 3-410 (485)
30 TIGR00712 glpT glycerol-3-phos 100.0 3.6E-34 7.8E-39 276.6 31.1 403 40-476 26-437 (438)
31 TIGR00897 2A0118 polyol permea 100.0 5E-33 1.1E-37 265.7 38.4 381 40-469 12-399 (402)
32 PRK15034 nitrate/nitrite trans 100.0 3.3E-33 7.2E-38 262.4 35.7 391 36-475 29-458 (462)
33 PRK11195 lysophospholipid tran 100.0 2.4E-33 5.2E-38 266.3 34.7 371 42-467 4-376 (393)
34 PRK10489 enterobactin exporter 100.0 1.3E-33 2.9E-38 271.4 33.2 371 43-467 19-395 (417)
35 PRK10077 xylE D-xylose transpo 100.0 2.6E-33 5.5E-38 274.9 35.7 416 39-476 10-461 (479)
36 TIGR00881 2A0104 phosphoglycer 100.0 2.1E-34 4.6E-39 274.2 27.1 365 49-437 3-373 (379)
37 PRK09874 drug efflux system pr 100.0 5.9E-33 1.3E-37 266.8 37.2 382 40-469 13-396 (408)
38 PRK15402 multidrug efflux syst 100.0 5.1E-33 1.1E-37 266.5 36.7 355 43-437 15-371 (406)
39 TIGR00887 2A0109 phosphate:H+ 100.0 6.9E-34 1.5E-38 279.1 31.3 424 37-477 12-493 (502)
40 KOG2615 Permease of the major 100.0 6.2E-35 1.3E-39 254.9 19.7 369 58-441 42-419 (451)
41 PRK15075 citrate-proton sympor 100.0 1.5E-32 3.4E-37 264.9 38.2 363 40-437 14-395 (434)
42 PRK10133 L-fucose transporter; 100.0 1E-32 2.2E-37 264.8 36.5 380 40-466 25-428 (438)
43 PRK11646 multidrug resistance 100.0 9.3E-33 2E-37 262.9 35.6 371 44-468 13-385 (400)
44 TIGR00710 efflux_Bcr_CflA drug 100.0 1.4E-32 3.1E-37 262.1 36.6 351 41-432 5-357 (385)
45 PRK03893 putative sialic acid 100.0 6.3E-33 1.4E-37 273.2 34.7 391 37-462 16-444 (496)
46 TIGR00892 2A0113 monocarboxyla 100.0 1E-32 2.2E-37 266.9 35.0 394 37-466 15-416 (455)
47 TIGR00899 2A0120 sugar efflux 100.0 3.2E-32 7E-37 258.7 37.0 364 47-469 3-372 (375)
48 PLN00028 nitrate transmembrane 100.0 5.7E-33 1.2E-37 269.9 32.4 389 39-469 34-431 (476)
49 TIGR00898 2A0119 cation transp 100.0 1.6E-33 3.5E-38 277.8 28.3 371 62-476 110-498 (505)
50 TIGR00894 2A0114euk Na(+)-depe 100.0 7.9E-33 1.7E-37 269.8 32.2 403 37-469 15-448 (465)
51 PRK10054 putative transporter; 100.0 2.5E-32 5.5E-37 259.5 34.5 373 41-469 7-382 (395)
52 COG2223 NarK Nitrate/nitrite t 100.0 2.8E-33 6.2E-38 250.0 25.3 389 35-474 8-404 (417)
53 PRK15403 multidrug efflux syst 100.0 1.2E-31 2.7E-36 256.2 37.9 374 45-469 20-395 (413)
54 PF07690 MFS_1: Major Facilita 100.0 1E-32 2.2E-37 259.9 29.2 347 46-427 1-352 (352)
55 TIGR00902 2A0127 phenyl propri 100.0 2.3E-31 5E-36 252.4 38.0 365 44-467 7-375 (382)
56 KOG0569 Permease of the major 100.0 2.3E-31 4.9E-36 248.6 34.0 389 68-477 46-459 (485)
57 PRK11043 putative transporter; 100.0 6.6E-31 1.4E-35 251.6 37.1 349 43-436 8-357 (401)
58 TIGR00895 2A0115 benzoate tran 100.0 1.4E-31 3.1E-36 256.4 32.1 369 39-433 15-397 (398)
59 PF05977 MFS_3: Transmembrane 100.0 1.3E-30 2.7E-35 251.3 36.2 386 37-474 6-397 (524)
60 KOG1330 Sugar transporter/spin 100.0 1.7E-32 3.8E-37 246.7 21.3 377 35-440 27-416 (493)
61 cd06174 MFS The Major Facilita 100.0 8.9E-31 1.9E-35 246.6 34.2 346 45-469 3-350 (352)
62 PRK11652 emrD multidrug resist 100.0 1.2E-30 2.7E-35 249.1 35.5 353 38-435 5-359 (394)
63 PRK10473 multidrug efflux syst 100.0 4E-30 8.6E-35 245.4 38.2 344 43-437 5-350 (392)
64 PRK11102 bicyclomycin/multidru 100.0 1.6E-30 3.4E-35 247.1 34.1 335 55-429 5-342 (377)
65 PRK15011 sugar efflux transpor 100.0 1E-29 2.2E-34 242.1 39.2 367 42-469 16-389 (393)
66 PRK11010 ampG muropeptide tran 100.0 8.5E-30 1.8E-34 248.1 38.2 380 40-469 11-401 (491)
67 TIGR00883 2A0106 metabolite-pr 100.0 3.1E-30 6.8E-35 246.8 30.8 367 51-461 3-391 (394)
68 TIGR00896 CynX cyanate transpo 100.0 7E-30 1.5E-34 240.3 31.9 334 55-438 14-350 (355)
69 PRK11128 putative 3-phenylprop 100.0 2.8E-29 6.1E-34 238.3 35.6 357 50-467 13-375 (382)
70 TIGR00886 2A0108 nitrite extru 100.0 2E-30 4.3E-35 245.6 27.7 352 43-422 3-365 (366)
71 TIGR00889 2A0110 nucleoside tr 100.0 1.9E-29 4.2E-34 241.0 34.4 386 46-476 7-406 (418)
72 TIGR00885 fucP L-fucose:H+ sym 100.0 4E-29 8.8E-34 237.8 36.1 356 42-437 4-382 (410)
73 KOG2532 Permease of the major 100.0 1.7E-30 3.6E-35 246.1 23.8 367 69-469 66-445 (466)
74 PRK09528 lacY galactoside perm 100.0 3.3E-29 7.2E-34 241.0 31.4 381 41-469 10-401 (420)
75 PRK11902 ampG muropeptide tran 100.0 7.8E-28 1.7E-32 230.0 38.1 371 46-469 4-388 (402)
76 TIGR00882 2A0105 oligosacchari 100.0 1.9E-28 4E-33 234.1 33.6 379 41-468 2-392 (396)
77 PRK08633 2-acyl-glycerophospho 100.0 2.5E-28 5.5E-33 264.2 34.6 366 41-435 9-383 (1146)
78 PRK06814 acylglycerophosphoeth 100.0 1.5E-28 3.3E-33 264.8 32.5 342 84-463 54-414 (1140)
79 TIGR00924 yjdL_sub1_fam amino 100.0 3.7E-27 8E-32 228.4 36.6 405 41-469 10-466 (475)
80 PRK10207 dipeptide/tripeptide 100.0 2E-27 4.4E-32 230.1 33.5 411 40-467 13-472 (489)
81 COG0738 FucP Fucose permease [ 100.0 4.2E-27 9.2E-32 209.0 32.1 376 39-466 11-404 (422)
82 KOG3764 Vesicular amine transp 100.0 3.7E-29 8E-34 220.3 15.9 378 43-469 23-452 (464)
83 KOG0254 Predicted transporter 100.0 3.7E-27 8E-32 231.5 31.5 399 57-476 63-487 (513)
84 TIGR02718 sider_RhtX_FptX side 100.0 4.7E-26 1E-30 217.1 38.1 374 43-467 3-387 (390)
85 KOG0253 Synaptic vesicle trans 100.0 1.4E-27 2.9E-32 207.7 23.2 398 38-469 75-517 (528)
86 KOG2533 Permease of the major 100.0 1.7E-27 3.6E-32 226.0 25.3 284 45-342 49-336 (495)
87 TIGR00805 oat sodium-independe 100.0 5.3E-28 1.2E-32 240.5 21.1 382 44-437 36-582 (633)
88 TIGR00901 2A0125 AmpG-related 100.0 1.1E-26 2.4E-31 218.8 29.0 331 57-420 4-355 (356)
89 KOG2504 Monocarboxylate transp 100.0 1.4E-26 3.1E-31 222.2 29.1 396 38-469 43-474 (509)
90 COG2807 CynX Cyanate permease 100.0 2.3E-25 5E-30 194.9 33.5 354 56-469 27-383 (395)
91 PF06609 TRI12: Fungal trichot 100.0 1.3E-25 2.9E-30 215.4 32.5 362 53-436 56-467 (599)
92 TIGR00792 gph sugar (Glycoside 100.0 6.5E-26 1.4E-30 219.9 30.7 350 53-438 11-382 (437)
93 KOG0252 Inorganic phosphate tr 100.0 8.8E-29 1.9E-33 221.8 8.2 420 42-476 42-501 (538)
94 PF03825 Nuc_H_symport: Nucleo 99.9 2.6E-24 5.6E-29 201.9 35.7 389 46-477 7-400 (400)
95 KOG0255 Synaptic vesicle trans 99.9 7.3E-25 1.6E-29 216.6 30.0 338 68-435 110-467 (521)
96 PF00083 Sugar_tr: Sugar (and 99.9 2.2E-31 4.7E-36 259.1 -17.0 409 47-477 6-441 (451)
97 PRK09584 tppB putative tripept 99.9 3.3E-23 7.2E-28 202.0 35.1 402 41-464 21-472 (500)
98 PF01306 LacY_symp: LacY proto 99.9 5.3E-23 1.2E-27 188.9 32.0 381 40-469 6-398 (412)
99 TIGR01301 GPH_sucrose GPH fami 99.9 1.4E-22 3.1E-27 192.3 34.3 411 39-476 2-475 (477)
100 TIGR00806 rfc RFC reduced fola 99.9 3.5E-23 7.6E-28 190.8 28.3 387 57-469 42-446 (511)
101 KOG4686 Predicted sugar transp 99.9 4E-25 8.7E-30 185.6 11.5 387 43-469 46-441 (459)
102 PTZ00207 hypothetical protein; 99.9 5.6E-22 1.2E-26 192.0 32.2 382 58-469 44-550 (591)
103 PRK09669 putative symporter Ya 99.9 1.3E-21 2.8E-26 189.5 32.2 364 39-439 7-391 (444)
104 PRK15462 dipeptide/tripeptide 99.9 1.3E-20 2.9E-25 179.6 36.4 404 40-463 8-469 (493)
105 PRK10429 melibiose:sodium symp 99.9 3.8E-21 8.3E-26 187.3 32.5 366 42-439 7-396 (473)
106 TIGR00788 fbt folate/biopterin 99.9 4.4E-22 9.5E-27 192.5 23.7 374 40-438 25-415 (468)
107 PRK09848 glucuronide transport 99.9 2E-20 4.3E-25 181.6 33.5 356 38-438 5-390 (448)
108 PF11700 ATG22: Vacuole efflux 99.9 1.1E-19 2.4E-24 173.8 36.6 355 83-469 71-466 (477)
109 PF13347 MFS_2: MFS/sugar tran 99.9 3E-20 6.4E-25 179.1 26.8 344 62-440 23-388 (428)
110 TIGR01272 gluP glucose/galacto 99.9 7.4E-20 1.6E-24 167.2 25.9 287 130-457 5-301 (310)
111 COG2211 MelB Na+/melibiose sym 99.9 7.1E-19 1.5E-23 163.3 30.8 372 37-440 8-400 (467)
112 KOG2325 Predicted transporter/ 99.9 3.9E-20 8.5E-25 172.0 21.4 400 33-467 26-471 (488)
113 COG2270 Permeases of the major 99.9 1.5E-19 3.2E-24 162.4 21.9 359 82-469 58-427 (438)
114 PRK11462 putative transporter; 99.9 4.8E-18 1E-22 164.4 33.7 361 39-437 7-388 (460)
115 PF03209 PUCC: PUCC protein; 99.8 1.8E-17 3.9E-22 149.6 33.0 367 66-469 5-396 (403)
116 COG3104 PTR2 Dipeptide/tripept 99.8 1.1E-17 2.3E-22 154.0 30.6 401 41-467 21-483 (498)
117 KOG2816 Predicted transporter 99.8 1.7E-17 3.6E-22 157.0 29.7 369 45-443 26-399 (463)
118 KOG2563 Permease of the major 99.8 1.6E-18 3.4E-23 156.6 20.7 369 37-437 41-422 (480)
119 PF03137 OATP: Organic Anion T 99.7 5.3E-19 1.1E-23 171.6 0.0 382 45-437 7-515 (539)
120 KOG3626 Organic anion transpor 99.7 3.5E-16 7.7E-21 151.7 17.2 384 43-437 99-650 (735)
121 PF05631 DUF791: Protein of un 99.6 8.6E-13 1.9E-17 117.8 24.3 268 53-357 46-321 (354)
122 TIGR00889 2A0110 nucleoside tr 99.6 1.3E-14 2.8E-19 139.1 13.9 185 45-230 212-405 (418)
123 PF03092 BT1: BT1 family; Int 99.6 2.5E-13 5.5E-18 129.8 22.5 384 61-469 10-411 (433)
124 PRK10642 proline/glycine betai 99.6 8.2E-14 1.8E-18 136.7 17.5 174 50-235 259-437 (490)
125 TIGR00890 2A0111 Oxalate/Forma 99.5 1.1E-13 2.3E-18 131.6 15.1 155 43-210 207-364 (377)
126 TIGR01299 synapt_SV2 synaptic 99.5 1.2E-13 2.6E-18 138.7 15.9 111 85-195 598-709 (742)
127 PRK11551 putative 3-hydroxyphe 99.5 7.6E-14 1.6E-18 134.1 14.1 143 48-196 227-370 (406)
128 PRK15011 sugar efflux transpor 99.5 2.4E-13 5.2E-18 129.7 17.0 140 57-210 232-373 (393)
129 PRK10054 putative transporter; 99.5 2.2E-12 4.9E-17 122.9 22.0 173 273-468 7-179 (395)
130 TIGR00892 2A0113 monocarboxyla 99.5 6.9E-14 1.5E-18 135.7 11.2 159 41-205 241-404 (455)
131 TIGR00880 2_A_01_02 Multidrug 99.5 3.7E-14 8.1E-19 114.2 7.7 108 88-195 4-112 (141)
132 PRK09528 lacY galactoside perm 99.5 8.1E-14 1.7E-18 134.3 10.6 120 84-210 264-385 (420)
133 TIGR00902 2A0127 phenyl propri 99.5 4.5E-13 9.8E-18 127.3 15.5 149 41-196 205-355 (382)
134 PRK05122 major facilitator sup 99.5 7.7E-13 1.7E-17 126.8 16.6 133 55-195 230-363 (399)
135 PRK11663 regulatory protein Uh 99.5 4E-12 8.7E-17 122.9 20.6 167 277-466 27-193 (434)
136 TIGR00899 2A0120 sugar efflux 99.5 1.1E-12 2.5E-17 124.5 16.2 131 58-195 216-348 (375)
137 PRK09705 cynX putative cyanate 99.5 2.2E-12 4.7E-17 123.0 18.1 148 43-198 207-357 (393)
138 PRK11646 multidrug resistance 99.5 8E-12 1.7E-16 119.3 21.5 169 276-467 13-181 (400)
139 TIGR00900 2A0121 H+ Antiporter 99.5 6.4E-12 1.4E-16 118.8 20.4 173 279-469 5-177 (365)
140 PRK10489 enterobactin exporter 99.5 2.9E-12 6.2E-17 123.5 17.5 188 264-469 8-195 (417)
141 PRK09874 drug efflux system pr 99.5 1.2E-12 2.6E-17 125.9 14.8 149 53-210 231-380 (408)
142 cd06174 MFS The Major Facilita 99.5 1.5E-12 3.4E-17 122.3 15.3 143 47-195 181-326 (352)
143 COG2814 AraJ Arabinose efflux 99.4 2.1E-11 4.5E-16 111.6 21.0 175 275-473 15-189 (394)
144 PRK03699 putative transporter; 99.4 3.4E-12 7.3E-17 121.9 16.3 147 42-195 206-354 (394)
145 PRK10213 nepI ribonucleoside t 99.4 2.3E-11 4.9E-16 116.0 21.8 144 307-467 48-191 (394)
146 PRK12382 putative transporter; 99.4 3.4E-12 7.3E-17 122.0 16.2 141 55-210 230-371 (392)
147 PRK03545 putative arabinose tr 99.4 1.8E-11 3.9E-16 116.8 20.5 147 306-469 36-182 (390)
148 PRK03893 putative sialic acid 99.4 2.6E-12 5.7E-17 126.8 15.2 131 59-195 293-427 (496)
149 PRK10091 MFS transport protein 99.4 1.9E-11 4.1E-16 116.3 19.9 178 273-474 3-180 (382)
150 TIGR00710 efflux_Bcr_CflA drug 99.4 2E-11 4.3E-16 116.5 20.1 146 307-469 33-178 (385)
151 TIGR02332 HpaX 4-hydroxyphenyl 99.4 2.6E-11 5.5E-16 116.4 20.7 152 305-469 34-187 (412)
152 PRK15462 dipeptide/tripeptide 99.4 2.3E-11 5E-16 116.7 20.1 176 272-468 8-186 (493)
153 TIGR00893 2A0114 d-galactonate 99.4 3.9E-12 8.5E-17 121.7 15.1 149 41-196 215-373 (399)
154 TIGR00883 2A0106 metabolite-pr 99.4 2E-12 4.3E-17 123.7 12.7 150 42-197 220-376 (394)
155 TIGR00895 2A0115 benzoate tran 99.4 3.9E-12 8.4E-17 121.9 14.7 144 44-193 253-397 (398)
156 PRK10504 putative transporter; 99.4 2.8E-11 6.1E-16 118.6 20.8 173 274-469 11-183 (471)
157 PRK03633 putative MFS family t 99.4 7.9E-12 1.7E-16 118.8 16.3 135 52-195 211-346 (381)
158 TIGR00897 2A0118 polyol permea 99.4 5.5E-12 1.2E-16 120.8 15.2 147 42-195 223-375 (402)
159 COG2271 UhpC Sugar phosphate p 99.4 5.8E-12 1.2E-16 113.9 13.5 172 275-469 31-204 (448)
160 PF07690 MFS_1: Major Facilita 99.4 2.8E-11 6E-16 113.9 18.6 163 282-466 5-167 (352)
161 PF06963 FPN1: Ferroportin1 (F 99.4 4.7E-09 1E-13 98.7 33.0 362 41-428 2-410 (432)
162 PLN00028 nitrate transmembrane 99.4 9.6E-11 2.1E-15 114.5 22.8 154 307-469 64-217 (476)
163 PRK09584 tppB putative tripept 99.4 5.8E-11 1.3E-15 116.3 21.0 180 266-466 13-196 (500)
164 TIGR00924 yjdL_sub1_fam amino 99.4 3.6E-11 7.9E-16 117.0 19.1 176 273-468 10-189 (475)
165 PRK11128 putative 3-phenylprop 99.4 1.2E-11 2.7E-16 117.5 15.6 147 42-195 206-354 (382)
166 PRK09556 uhpT sugar phosphate 99.4 9.3E-12 2E-16 121.6 15.0 149 41-195 258-411 (467)
167 PRK11195 lysophospholipid tran 99.4 7.4E-11 1.6E-15 112.4 20.8 167 272-465 2-168 (393)
168 TIGR00711 efflux_EmrB drug res 99.4 3.5E-11 7.7E-16 118.5 18.3 166 281-469 10-175 (485)
169 TIGR00891 2A0112 putative sial 99.4 9.4E-11 2E-15 112.6 20.8 144 307-465 40-183 (405)
170 PRK10473 multidrug efflux syst 99.4 1.1E-10 2.3E-15 111.6 20.6 145 308-469 32-176 (392)
171 PRK14995 methyl viologen resis 99.3 1.1E-10 2.5E-15 114.7 20.8 168 279-469 12-180 (495)
172 PF01770 Folate_carrier: Reduc 99.3 3.3E-09 7.1E-14 97.8 28.4 343 65-428 28-394 (412)
173 TIGR00879 SP MFS transporter, 99.3 3E-11 6.5E-16 118.8 16.4 147 43-195 286-444 (481)
174 PF05977 MFS_3: Transmembrane 99.3 1.7E-10 3.7E-15 112.2 20.9 184 267-468 4-187 (524)
175 PRK15403 multidrug efflux syst 99.3 1.1E-10 2.5E-15 111.8 19.1 150 307-474 44-193 (413)
176 PRK10207 dipeptide/tripeptide 99.3 1.3E-10 2.8E-15 113.3 19.5 174 272-466 13-189 (489)
177 TIGR00903 2A0129 major facilit 99.3 1.3E-10 2.8E-15 109.2 18.7 148 308-474 20-167 (368)
178 PRK15402 multidrug efflux syst 99.3 2.2E-10 4.7E-15 110.1 20.6 146 307-469 41-186 (406)
179 PRK11102 bicyclomycin/multidru 99.3 1.2E-10 2.7E-15 110.6 18.6 143 309-468 21-163 (377)
180 TIGR00896 CynX cyanate transpo 99.3 9.1E-11 2E-15 110.5 17.4 151 43-200 199-352 (355)
181 PRK09952 shikimate transporter 99.3 4E-11 8.7E-16 116.0 14.9 142 49-196 258-406 (438)
182 PRK11043 putative transporter; 99.3 3.1E-10 6.6E-15 108.9 20.8 165 285-469 15-179 (401)
183 TIGR00712 glpT glycerol-3-phos 99.3 1.2E-10 2.5E-15 113.0 17.9 147 309-468 56-203 (438)
184 TIGR00886 2A0108 nitrite extru 99.3 3.9E-10 8.5E-15 106.8 21.1 175 275-462 3-179 (366)
185 TIGR00885 fucP L-fucose:H+ sym 99.3 6.2E-10 1.3E-14 106.5 22.3 185 275-469 5-205 (410)
186 PRK12307 putative sialic acid 99.3 2.8E-10 6.1E-15 110.1 20.0 136 307-459 46-181 (426)
187 PRK11273 glpT sn-glycerol-3-ph 99.3 4E-11 8.6E-16 116.6 13.9 157 41-210 253-417 (452)
188 PRK11652 emrD multidrug resist 99.3 4E-10 8.7E-15 107.8 20.2 144 307-467 36-179 (394)
189 TIGR00881 2A0104 phosphoglycer 99.3 5.2E-11 1.1E-15 113.2 13.4 148 42-195 217-371 (379)
190 KOG0637 Sucrose transporter an 99.3 2.1E-10 4.5E-15 104.6 15.6 147 41-193 32-202 (498)
191 PF11700 ATG22: Vacuole efflux 99.3 1.9E-10 4.1E-15 110.7 16.4 156 41-202 281-448 (477)
192 PRK15034 nitrate/nitrite trans 99.2 1.6E-09 3.5E-14 102.9 21.7 189 273-469 34-230 (462)
193 TIGR00882 2A0105 oligosacchari 99.2 9.8E-11 2.1E-15 112.0 13.6 120 84-210 256-377 (396)
194 TIGR00880 2_A_01_02 Multidrug 99.2 2E-10 4.3E-15 92.2 12.5 131 322-469 6-136 (141)
195 PRK15075 citrate-proton sympor 99.2 2.2E-10 4.7E-15 110.9 14.9 140 51-196 248-394 (434)
196 PRK11010 ampG muropeptide tran 99.2 2.4E-09 5.1E-14 104.9 22.0 134 64-210 246-385 (491)
197 TIGR00806 rfc RFC reduced fola 99.2 4.3E-09 9.4E-14 98.4 21.5 146 308-469 55-201 (511)
198 TIGR00769 AAA ADP/ATP carrier 99.2 2.8E-07 6E-12 87.9 33.9 369 40-434 6-437 (472)
199 TIGR02718 sider_RhtX_FptX side 99.2 2.8E-10 6.1E-15 108.6 13.8 141 49-195 216-365 (390)
200 TIGR00792 gph sugar (Glycoside 99.2 1.2E-10 2.5E-15 113.2 11.3 150 41-196 222-380 (437)
201 TIGR00894 2A0114euk Na(+)-depe 99.2 1.1E-09 2.4E-14 107.1 18.0 147 308-469 70-217 (465)
202 PRK10133 L-fucose transporter; 99.2 5.6E-09 1.2E-13 100.8 22.4 150 275-434 28-177 (438)
203 PRK10077 xylE D-xylose transpo 99.2 1.9E-09 4E-14 106.1 19.0 157 308-467 49-211 (479)
204 KOG0569 Permease of the major 99.2 1E-09 2.3E-14 103.8 15.6 147 43-195 271-429 (485)
205 KOG2504 Monocarboxylate transp 99.2 4.8E-10 1E-14 108.6 13.6 161 41-207 298-461 (509)
206 TIGR00887 2A0109 phosphate:H+ 99.1 5.5E-09 1.2E-13 103.1 21.1 164 309-475 51-227 (502)
207 PF03825 Nuc_H_symport: Nucleo 99.1 8.5E-10 1.8E-14 104.1 14.6 163 41-210 207-377 (400)
208 KOG3098 Uncharacterized conser 99.1 1.1E-07 2.4E-12 89.4 28.2 332 88-434 56-412 (461)
209 PRK06814 acylglycerophosphoeth 99.1 3.8E-09 8.3E-14 115.0 20.6 187 267-468 5-192 (1140)
210 KOG3762 Predicted transporter 99.1 6.9E-09 1.5E-13 96.7 18.9 178 268-468 366-544 (618)
211 TIGR00901 2A0125 AmpG-related 99.1 7.1E-10 1.5E-14 104.5 13.1 132 43-180 211-355 (356)
212 KOG1330 Sugar transporter/spin 99.1 6.5E-11 1.4E-15 108.2 5.6 150 308-475 62-212 (493)
213 KOG3764 Vesicular amine transp 99.1 7.4E-10 1.6E-14 99.3 11.9 146 307-469 99-245 (464)
214 TIGR01272 gluP glucose/galacto 99.1 2.2E-09 4.9E-14 98.3 15.5 146 41-195 140-289 (310)
215 COG2223 NarK Nitrate/nitrite t 99.1 3.2E-09 6.9E-14 96.5 15.9 147 307-469 42-191 (417)
216 PRK10406 alpha-ketoglutarate t 99.1 1E-08 2.2E-13 99.3 20.6 145 316-464 65-212 (432)
217 TIGR00898 2A0119 cation transp 99.1 5E-10 1.1E-14 110.9 11.5 107 88-195 361-470 (505)
218 PF13347 MFS_2: MFS/sugar tran 99.1 1.5E-09 3.2E-14 104.9 14.4 150 40-195 224-383 (428)
219 PRK11902 ampG muropeptide tran 99.1 1.2E-08 2.5E-13 97.9 20.3 165 281-467 7-178 (402)
220 PF02487 CLN3: CLN3 protein; 99.1 2.3E-07 4.9E-12 85.8 27.5 367 45-433 4-394 (402)
221 COG2270 Permeases of the major 99.1 2.5E-09 5.5E-14 97.1 14.4 154 42-201 253-408 (438)
222 PRK08633 2-acyl-glycerophospho 99.1 1.7E-09 3.7E-14 118.0 14.5 143 47-195 238-383 (1146)
223 KOG3574 Acetyl-CoA transporter 99.0 1.9E-08 4.1E-13 89.5 17.1 369 37-438 27-433 (510)
224 TIGR00805 oat sodium-independe 99.0 2.9E-09 6.3E-14 106.9 13.6 162 305-467 59-277 (633)
225 KOG4332 Predicted sugar transp 99.0 2.7E-08 5.9E-13 84.3 16.4 370 50-466 46-426 (454)
226 TIGR01301 GPH_sucrose GPH fami 99.0 3.1E-08 6.7E-13 95.0 18.5 164 309-474 34-220 (477)
227 KOG4686 Predicted sugar transp 99.0 6.9E-09 1.5E-13 88.6 12.0 149 43-199 266-417 (459)
228 PTZ00207 hypothetical protein; 99.0 1.1E-07 2.4E-12 93.3 22.1 148 307-468 55-202 (591)
229 TIGR00926 2A1704 Peptide:H+ sy 99.0 2.3E-07 5E-12 92.7 24.5 131 59-195 6-149 (654)
230 PRK10429 melibiose:sodium symp 99.0 2.5E-09 5.5E-14 104.6 10.5 149 41-195 231-392 (473)
231 PRK09848 glucuronide transport 99.0 2.7E-09 5.8E-14 103.9 10.0 149 41-195 228-387 (448)
232 PF01306 LacY_symp: LacY proto 98.9 4.8E-08 1E-12 90.8 16.6 177 270-466 4-183 (412)
233 COG3104 PTR2 Dipeptide/tripept 98.9 1.4E-08 3E-13 94.6 12.9 182 272-469 20-204 (498)
234 KOG2615 Permease of the major 98.9 3.2E-08 6.9E-13 88.5 14.0 119 309-435 63-181 (451)
235 KOG2532 Permease of the major 98.9 4.5E-08 9.7E-13 93.8 16.0 148 307-469 66-214 (466)
236 KOG0253 Synaptic vesicle trans 98.9 3.5E-09 7.6E-14 93.9 7.7 95 93-190 392-490 (528)
237 PF06609 TRI12: Fungal trichot 98.9 6.1E-08 1.3E-12 94.5 15.7 142 309-469 74-215 (599)
238 COG0477 ProP Permeases of the 98.9 5.7E-08 1.2E-12 89.5 15.0 145 46-196 7-158 (338)
239 PRK09669 putative symporter Ya 98.9 1.8E-08 3.8E-13 98.0 11.6 147 43-195 231-387 (444)
240 PF06813 Nodulin-like: Nodulin 98.9 7E-08 1.5E-12 83.8 13.9 132 56-195 17-156 (250)
241 COG0738 FucP Fucose permease [ 98.8 1.2E-06 2.5E-11 79.6 19.8 187 278-474 18-213 (422)
242 PF06779 DUF1228: Protein of u 98.7 4.7E-08 1E-12 68.2 7.2 81 53-139 4-84 (85)
243 PRK11462 putative transporter; 98.7 1.5E-07 3.1E-12 91.6 13.0 148 43-196 230-387 (460)
244 COG2211 MelB Na+/melibiose sym 98.7 1.3E-07 2.8E-12 89.0 11.7 149 41-195 236-395 (467)
245 COG2807 CynX Cyanate permease 98.7 8E-07 1.7E-11 79.4 15.4 153 43-202 210-365 (395)
246 KOG2533 Permease of the major 98.7 7.1E-07 1.5E-11 85.9 16.0 155 307-473 74-228 (495)
247 KOG0254 Predicted transporter 98.7 2.3E-06 5E-11 84.7 19.2 144 314-475 89-232 (513)
248 KOG3762 Predicted transporter 98.6 1.2E-07 2.5E-12 88.8 8.8 152 46-210 376-529 (618)
249 TIGR00788 fbt folate/biopterin 98.6 7E-08 1.5E-12 93.9 7.3 123 69-197 281-414 (468)
250 KOG0255 Synaptic vesicle trans 98.6 1E-06 2.2E-11 87.6 14.9 138 309-466 113-250 (521)
251 PF05978 UNC-93: Ion channel r 98.6 2E-06 4.2E-11 68.9 13.5 107 88-195 43-150 (156)
252 KOG1237 H+/oligopeptide sympor 98.6 0.00023 4.9E-09 70.2 29.4 162 37-205 33-228 (571)
253 PF12832 MFS_1_like: MFS_1 lik 98.5 5.5E-07 1.2E-11 62.6 7.0 71 46-122 5-75 (77)
254 PF03209 PUCC: PUCC protein; 98.5 3.2E-06 6.9E-11 77.5 12.9 142 49-196 216-363 (403)
255 PF13000 Acatn: Acetyl-coenzym 98.4 3.5E-05 7.6E-10 72.2 18.4 381 43-437 2-468 (544)
256 KOG0252 Inorganic phosphate tr 98.4 1.7E-06 3.7E-11 79.7 8.9 127 310-437 80-207 (538)
257 KOG3810 Micronutrient transpor 98.3 1.4E-05 3E-10 71.0 13.2 358 92-469 52-419 (433)
258 PF03219 TLC: TLC ATP/ADP tran 98.3 0.002 4.4E-08 62.2 27.6 297 38-354 21-358 (491)
259 PF00083 Sugar_tr: Sugar (and 98.2 3.8E-09 8.2E-14 103.0 -12.0 132 56-195 268-410 (451)
260 PF06813 Nodulin-like: Nodulin 98.2 3.4E-05 7.4E-10 67.2 13.5 127 305-435 28-156 (250)
261 PF05631 DUF791: Protein of un 98.2 0.00063 1.4E-08 61.7 21.1 145 309-469 64-214 (354)
262 KOG2816 Predicted transporter 98.2 0.00013 2.7E-09 70.1 17.4 132 323-475 71-202 (463)
263 TIGR00926 2A1704 Peptide:H+ sy 98.1 0.00014 3.1E-09 73.0 17.1 170 291-469 5-180 (654)
264 KOG2563 Permease of the major 98.0 7.9E-05 1.7E-09 68.9 11.9 127 309-437 75-203 (480)
265 KOG1479 Nucleoside transporter 97.9 0.0039 8.3E-08 57.8 20.3 122 41-167 18-149 (406)
266 PF12832 MFS_1_like: MFS_1 lik 97.9 0.00021 4.5E-09 49.7 9.2 70 278-354 5-74 (77)
267 COG3202 ATP/ADP translocase [E 97.9 0.028 6E-07 53.3 28.7 299 39-358 25-365 (509)
268 TIGR00939 2a57 Equilibrative N 97.8 0.0074 1.6E-07 58.0 21.8 51 379-429 377-427 (437)
269 KOG2325 Predicted transporter/ 97.8 0.0005 1.1E-08 65.4 13.6 158 309-469 66-227 (488)
270 PF05978 UNC-93: Ion channel r 97.6 0.012 2.7E-07 47.2 16.5 107 321-435 44-150 (156)
271 PF07672 MFS_Mycoplasma: Mycop 97.5 0.0034 7.5E-08 54.1 13.4 245 166-428 2-260 (267)
272 KOG3880 Predicted small molecu 97.5 0.0018 3.8E-08 56.9 11.7 149 43-195 14-171 (409)
273 PF03092 BT1: BT1 family; Int 97.5 0.0014 3.1E-08 63.1 12.6 148 308-469 19-173 (433)
274 KOG3097 Predicted membrane pro 97.5 0.029 6.2E-07 50.1 18.6 97 93-190 69-177 (390)
275 PF00854 PTR2: POT family; In 97.4 0.0025 5.4E-08 60.4 13.0 91 113-210 2-105 (372)
276 PRK03612 spermidine synthase; 97.4 0.036 7.8E-07 54.7 21.3 165 282-465 23-191 (521)
277 PF03137 OATP: Organic Anion T 97.4 2.9E-05 6.3E-10 76.3 -0.4 164 305-469 29-248 (539)
278 PF02487 CLN3: CLN3 protein; 97.4 0.0019 4.2E-08 60.2 11.3 108 84-195 283-396 (402)
279 COG0477 ProP Permeases of the 97.3 0.046 1E-06 49.8 19.2 134 314-460 39-174 (338)
280 TIGR00769 AAA ADP/ATP carrier 97.1 0.24 5.1E-06 48.0 22.1 125 312-436 41-191 (472)
281 PF01770 Folate_carrier: Reduc 97.0 0.15 3.3E-06 47.9 19.6 146 309-469 35-180 (412)
282 KOG3626 Organic anion transpor 96.8 0.0037 8E-08 62.4 7.8 164 305-469 123-341 (735)
283 PF06779 DUF1228: Protein of u 96.5 0.035 7.5E-07 39.1 8.5 73 288-367 7-79 (85)
284 PRK03612 spermidine synthase; 96.5 0.12 2.6E-06 51.1 15.4 141 47-195 20-170 (521)
285 PF06963 FPN1: Ferroportin1 (F 96.4 0.048 1E-06 52.0 11.7 129 60-194 277-416 (432)
286 PF00854 PTR2: POT family; In 96.3 0.036 7.8E-07 52.5 10.3 114 346-469 2-121 (372)
287 KOG3098 Uncharacterized conser 95.8 0.12 2.5E-06 49.5 11.1 148 42-193 241-411 (461)
288 KOG4830 Predicted sugar transp 95.7 0.0048 1E-07 52.8 1.5 66 43-114 19-93 (412)
289 TIGR00939 2a57 Equilibrative N 95.5 0.27 5.7E-06 47.4 12.4 110 84-194 309-432 (437)
290 KOG0637 Sucrose transporter an 95.3 0.057 1.2E-06 50.7 6.9 122 309-431 62-200 (498)
291 KOG2601 Iron transporter [Inor 95.3 0.34 7.5E-06 44.3 11.4 150 41-195 27-200 (503)
292 PF01733 Nucleoside_tran: Nucl 93.7 0.021 4.5E-07 52.4 0.4 107 86-192 186-306 (309)
293 PF01733 Nucleoside_tran: Nucl 93.0 0.034 7.4E-07 51.0 0.6 109 319-429 187-303 (309)
294 PF03219 TLC: TLC ATP/ADP tran 92.6 11 0.00024 37.0 20.8 124 312-435 56-205 (491)
295 KOG1237 H+/oligopeptide sympor 91.8 6.8 0.00015 39.3 14.8 160 294-469 58-243 (571)
296 PF07672 MFS_Mycoplasma: Mycop 88.4 1.5 3.3E-05 38.3 6.2 102 84-185 143-254 (267)
297 KOG3880 Predicted small molecu 87.3 3 6.4E-05 37.5 7.3 74 120-193 327-401 (409)
298 KOG3574 Acetyl-CoA transporter 87.2 21 0.00046 33.5 12.8 148 274-429 32-188 (510)
299 KOG4332 Predicted sugar transp 86.9 1.9 4.1E-05 37.9 5.8 148 306-469 64-218 (454)
300 KOG1479 Nucleoside transporter 86.5 30 0.00065 32.8 14.8 43 373-416 116-158 (406)
301 PRK11469 hypothetical protein; 83.1 26 0.00057 29.3 14.8 52 310-361 130-181 (188)
302 PF11085 YqhR: Conserved membr 77.0 38 0.00082 27.5 11.2 70 291-362 45-116 (173)
303 COG5336 Uncharacterized protei 75.5 19 0.0004 26.5 6.5 40 85-124 45-85 (116)
304 COG5336 Uncharacterized protei 68.0 27 0.00058 25.7 5.9 36 404-439 36-71 (116)
305 COG4262 Predicted spermidine s 67.4 1.1E+02 0.0023 28.6 16.5 58 375-434 106-163 (508)
306 PF11947 DUF3464: Protein of u 63.6 51 0.0011 26.4 7.3 50 373-425 96-145 (153)
307 COG1971 Predicted membrane pro 60.1 1E+02 0.0022 25.7 14.6 28 334-361 156-183 (190)
308 TIGR02230 ATPase_gene1 F0F1-AT 59.0 65 0.0014 23.6 6.6 22 334-355 62-83 (100)
309 TIGR00267 conserved hypothetic 58.2 55 0.0012 26.8 7.1 35 95-129 126-160 (169)
310 COG4769 Predicted membrane pro 57.7 22 0.00047 28.5 4.3 52 91-148 82-133 (181)
311 PF13000 Acatn: Acetyl-coenzym 57.7 1.1E+02 0.0023 30.3 9.7 56 140-195 410-466 (544)
312 KOG2601 Iron transporter [Inor 56.6 1.8E+02 0.0039 27.6 11.0 28 412-439 177-204 (503)
313 COG3202 ATP/ADP translocase [E 56.3 2.1E+02 0.0045 28.2 19.7 126 311-437 58-211 (509)
314 PF07760 DUF1616: Protein of u 54.1 1.7E+02 0.0036 26.6 10.2 57 138-194 22-78 (287)
315 PF02694 UPF0060: Uncharacteri 53.7 31 0.00068 25.4 4.3 48 84-131 56-103 (107)
316 KOG3810 Micronutrient transpor 52.6 33 0.00072 31.8 5.3 94 84-177 273-369 (433)
317 PRK02237 hypothetical protein; 48.7 53 0.0011 24.3 4.8 48 84-131 58-105 (109)
318 KOG2881 Predicted membrane pro 47.2 1.8E+02 0.0038 25.7 8.4 25 334-358 259-283 (294)
319 COG1268 BioY Uncharacterized c 47.1 90 0.0019 26.0 6.6 24 88-111 88-111 (184)
320 TIGR02840 spore_YtaF putative 45.8 1.9E+02 0.0041 24.7 14.2 47 310-357 153-201 (206)
321 PRK10263 DNA translocase FtsK; 44.9 4.3E+02 0.0093 29.8 12.6 18 420-437 141-158 (1355)
322 KOG1277 Endosomal membrane pro 43.7 1.6E+02 0.0034 28.4 8.2 31 84-114 325-360 (593)
323 COG3619 Predicted membrane pro 43.4 2.2E+02 0.0048 24.7 16.1 112 84-195 57-193 (226)
324 PF02632 BioY: BioY family; I 42.6 1.3E+02 0.0028 24.1 6.7 42 88-129 59-100 (148)
325 PRK11469 hypothetical protein; 41.8 1.6E+02 0.0036 24.6 7.5 76 39-127 104-180 (188)
326 PF06912 DUF1275: Protein of u 40.3 2.3E+02 0.005 24.1 15.6 170 39-227 1-206 (209)
327 PF02990 EMP70: Endomembrane p 39.6 4.1E+02 0.0088 26.7 11.8 27 317-344 300-326 (521)
328 PF10785 NADH-u_ox-rdase: NADH 36.9 1.5E+02 0.0033 21.0 5.7 42 94-135 30-78 (86)
329 PF02535 Zip: ZIP Zinc transpo 32.8 3.8E+02 0.0083 24.4 11.7 32 136-167 261-294 (317)
330 PF06341 DUF1056: Protein of u 32.2 1.1E+02 0.0024 20.1 3.9 37 133-169 26-62 (63)
331 PF07456 Hpre_diP_synt_I: Hept 29.1 2.5E+02 0.0054 22.5 6.3 51 89-145 68-118 (148)
332 cd02437 CCC1_like_1 CCC1-relat 29.0 2.5E+02 0.0055 23.1 6.7 48 58-118 107-154 (175)
333 TIGR02230 ATPase_gene1 F0F1-AT 27.2 2.6E+02 0.0056 20.6 6.3 30 96-125 56-86 (100)
334 PF07857 DUF1632: CEO family ( 27.0 2E+02 0.0043 25.5 6.0 24 41-64 180-203 (254)
335 COG4262 Predicted spermidine s 26.0 5.7E+02 0.012 24.2 12.1 94 62-161 28-132 (508)
336 COG2962 RarD Predicted permeas 25.6 5.1E+02 0.011 23.5 10.2 80 265-358 61-140 (293)
337 TIGR00801 ncs2 uracil-xanthine 25.2 6.3E+02 0.014 24.4 9.8 97 69-172 31-132 (415)
338 PF11947 DUF3464: Protein of u 23.1 1.8E+02 0.0038 23.4 4.4 29 84-112 98-126 (153)
339 PF04281 Tom22: Mitochondrial 23.1 3.8E+02 0.0082 21.1 6.3 25 399-423 60-84 (137)
340 COG2836 Uncharacterized conser 22.4 5.2E+02 0.011 22.4 12.6 43 311-354 161-206 (232)
341 PF11085 YqhR: Conserved membr 21.8 4.6E+02 0.0099 21.6 8.2 69 84-152 68-151 (173)
342 PF02694 UPF0060: Uncharacteri 21.7 1.8E+02 0.0039 21.6 3.8 49 314-363 54-102 (107)
343 KOG1397 Ca2+/H+ antiporter VCX 21.0 1.8E+02 0.0039 27.4 4.6 39 39-77 288-326 (441)
No 1
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=100.00 E-value=4.1e-39 Score=291.18 Aligned_cols=379 Identities=19% Similarity=0.194 Sum_probs=308.1
Q ss_pred CCCchhHHHHHHHHHHHhhhchhchHhHHHHHHHHhcccccchhhhhhhHHHHHHHHHHHHHHhhhhhhhhhhcCCchhh
Q 011783 36 SGLPITELFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVI 115 (477)
Q Consensus 36 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~Grr~~~ 115 (477)
++..+..++.+.++.|.......+....+|++.+|+|.|..+ .|+..|+|.+++.++.|+...++||+.||+++
T Consensus 8 ~~~~~~~l~aLa~~~F~igttEfv~~gLLp~iA~dl~vs~~~------aG~lis~yAl~~ai~ap~l~~lt~r~~Rr~lL 81 (394)
T COG2814 8 RKPMWLALLALALAAFAIGTTEFVPVGLLPPIAADLGVSEGA------AGQLITAYALGVALGAPLLALLTGRLERRRLL 81 (394)
T ss_pred cccchHHHHHHHHHHHHHHhHHHHHHhchHHHHHHcCCCHHH------HHHHHHHHHHHHHHHHHHHHHHHcccchHHHH
Confidence 445567788899999999999999999999999999999999 99999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhhhhHHHHHHHHHHhhhcccchhhH-HHHhhhhccccchhhHHHHHHHHhHHHHHHHHhHHHHhh
Q 011783 116 IMGTASVVIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLA 194 (477)
Q Consensus 116 ~~~~~~~~i~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~ 194 (477)
+..+.++.++++++++++||+.++++|++.|+..|.+.+. .++.+|..|+++|++++++...+..++.++|.++|.++.
T Consensus 82 l~~l~lFi~~n~l~alAp~f~~Ll~aR~~~g~a~G~f~~i~~~~a~~lvpp~~~~~Aiaiv~~G~tlA~v~GvPLGt~ig 161 (394)
T COG2814 82 LGLLALFIVSNLLSALAPSFAVLLLARALAGLAHGVFWSIAAALAARLVPPGKRGRALALVFTGLTLATVLGVPLGTFLG 161 (394)
T ss_pred HHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCccchhhHHHHHHHHHHHHHHHhccHHHHHH
Confidence 9999999999999999999999999999999999998888 999999999999999999999999999999999999999
Q ss_pred hccccCCcccccccccccccch-HHHHHHHHHhhccccccCCCCCCccchhhhhhhhhhccchhhcccCCchhhhhhcch
Q 011783 195 QPAEKYPNLFSSESLFGKFPYF-LPCLCISLFAFGETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKSLLKNW 273 (477)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 273 (477)
+ .+|||..|...... +...+.....+| ++..+++ +..+..+..+++|+|
T Consensus 162 ~-------~~GWR~~F~~ia~l~ll~~~~~~~~lP--~~~~~~~---------------------~~~~~~~~~~~l~~p 211 (394)
T COG2814 162 Q-------LFGWRATFLAIAVLALLALLLLWKLLP--PSEISGS---------------------LPGPLRTLLRLLRRP 211 (394)
T ss_pred H-------HhhHHHHHHHHHHHHHHHHHHHHHhCC--CccCCCC---------------------CCcchhHHHHHhcCc
Confidence 9 78898888421111 122222333444 1111111 111223466789999
Q ss_pred hhHHHHHHHHHHHhhhhhhHHHHHHhhcCcccCCccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHH
Q 011783 274 PLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGV 353 (477)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 353 (477)
.++...+..++....++..+++...++++. .|++....++.+..++++.++++. ++|++.|| +.++.+.....
T Consensus 212 ~v~~~l~~t~l~~~g~F~~ftYi~P~L~~v-----~g~s~~~vs~~Ll~~Gv~~~~Gn~-~gGrl~dr-~~~~~l~~~~~ 284 (394)
T COG2814 212 GVLLGLLATFLFMTGHFALYTYIRPFLESV-----AGFSVSAVSLVLLAFGIAGFIGNL-LGGRLADR-GPRRALIAALL 284 (394)
T ss_pred hHHHHHHHHHHHHcchhhhHHhHHHHHHHc-----cCCCHhHHHHHHHHHHHHHHHHHH-HHhhhccc-cchhHHHHHHH
Confidence 999999999988888888877777676655 899999999999999999999999 99999999 88888888877
Q ss_pred HHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhhhhHHHHhHHHHHHhhcCCcchhhHHhHHHHHHHHHHHHHhhhHHHHH
Q 011783 354 LTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIAMTGMSLFKAAGPAGGGAL 433 (477)
Q Consensus 354 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l 433 (477)
+..+.++.+.+..... + ......++.++..............+ .-+|.++.+.+++....++|..+|..++|.+
T Consensus 285 l~a~~~l~l~~~~~~~----~-~~~~~~~~wg~a~~~~~~~~~~~~a~-~~p~~~~~a~sl~~aa~nlgia~GA~lGG~v 358 (394)
T COG2814 285 LLALALLALTFTGASP----A-LALALLFLWGFAFSPALQGLQTRLAR-LAPDAADLAGSLNVAAFNLGIALGAALGGLV 358 (394)
T ss_pred HHHHHHHHHHHhcchH----H-HHHHHHHHHHHHhhhhhhHHHHHhcc-cCCCchHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 7777777666555422 1 22222222344444444444444445 3358899999999999999999999999999
Q ss_pred HHHhhhhccccCCCCchHHHHHHHHHHHHHHHHHhhhhhh
Q 011783 434 FSWAQKRLDASFLPGSQMVFFVLNVVEAIGVLMTFKPFLA 473 (477)
Q Consensus 434 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 473 (477)
+|+. |+....++.+++.+++.++.+.....
T Consensus 359 ~~~~----------g~~~~~~~~a~l~~~a~~~~~~~~~~ 388 (394)
T COG2814 359 LDAL----------GYAATGWVGAALLLLALLLALLSARK 388 (394)
T ss_pred HHhh----------chHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 9997 89999999999999998887764333
No 2
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=100.00 E-value=3.1e-38 Score=307.16 Aligned_cols=408 Identities=14% Similarity=0.043 Sum_probs=278.3
Q ss_pred hHHHHHHHHHHHhhhchhchHhHHHHHHHHhcccccchhhhhhhHHHHHHHHHHHHHHhhhhhhhhhhcCCchhhHHHHH
Q 011783 41 TELFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTA 120 (477)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~Grr~~~~~~~~ 120 (477)
+.+..+++..++.++++..+++..|.+.+|+|.+..+ .|++.+++.+++.+++++.|+++||+|||+++..+.+
T Consensus 29 ~i~~~~~~~~~~~y~~r~~~~~~~~~i~~~~~~s~~~------~g~~~s~~~~~~~~~~~~~G~l~Dr~g~r~~l~~~~~ 102 (467)
T PRK09556 29 QSYLVVFIGYLTMYLIRKNFKAAQNDMISTYGLSTTE------LGMIGLGFSITYGVGKTLVGYYADGKNTKQFLPFLLI 102 (467)
T ss_pred HHHHHHHHHHHHHHHHhcChhhhhHHHHHhcCCCHHH------HHHHHHHHHHHHHHHHhhhhhHhhccCccchHHHHHH
Confidence 3455677777888889999999999999999999999 9999999999999999999999999999999999988
Q ss_pred HHHHHHHHHHh-----hhhHHHHHHHHHHhhhcccchhhH-HHHhhhhccccchhhHHHHHHHHhHHHHHHHHhHHHHhh
Q 011783 121 SVVIFNTLFGL-----SVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLA 194 (477)
Q Consensus 121 ~~~i~~~~~~~-----~~~~~~l~~~r~l~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~ 194 (477)
++++..++.++ ++|++.+++.|+++|++.+...|. .++++|++|+++|++++|+...+.++|.++++++..++.
T Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~rg~a~gi~~~~~~lG~~l~~~i~~~~~ 182 (467)
T PRK09556 103 LSAICMLGFGASLGSGSVSLGLMIALWALSGFFQSTGGPCSYSTITRWTPRRKRGRFLGFWNISHNLGGAGAGGVALWGA 182 (467)
T ss_pred HHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHhccchHHHHHHHHHcCccceeeeEEeeecccchhhhHHHHHHHHHH
Confidence 88877776665 589999999999999999888887 899999999999999999999999999999999987766
Q ss_pred hccccCCcccccccccccccc-hHHHHHHHHHhhccccccCCCCCCccchhhhhhhhhhccchhhcccCCc-hhhhhhcc
Q 011783 195 QPAEKYPNLFSSESLFGKFPY-FLPCLCISLFAFGETLHRHNDDDDSCDVSYDALESASAEVKEEEGREAT-PKKSLLKN 272 (477)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 272 (477)
+.... -+|+..|..... .+...+..++..++.++..+..++++ ...+....+.++.++++..... ..+..+|+
T Consensus 183 ~~~~~----~~~~~~f~~~g~~~~~~~i~~~~~~~~~p~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 257 (467)
T PRK09556 183 NYFFD----GHVIGMFIFPSIIALIIGFIGLRYGSDSPEELGWGKAEE-IFGEPISEEDKETESTDMTKWQIFVEYVLKN 257 (467)
T ss_pred Hhhcc----CcchhHHHHHHHHHHHHHHHHHHhCCCChhhcCCCChhh-cccCccchhhhccccccCcHHHHHHHHHHcC
Confidence 53110 024433311011 11112222233344433221111100 0000000000000000000011 12337899
Q ss_pred hhhHHHHHHHHHHHhhhhhhHHHHHHhhcCcccCCccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHH
Q 011783 273 WPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAG 352 (477)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 352 (477)
|.+|...+..++..........+.|.|+.+. +|+++.+.+.......++.+++.+ +.++++||+++|+......
T Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~p~yl~~~-----~g~s~~~a~~~~~~~~~~~~ig~~-~~G~lsDr~g~r~~~~~~~ 331 (467)
T PRK09556 258 PVIWLLCFANIFLYIVRIGIDNWSPVYAFQE-----LGFSKEDAINTFTLFEIGALVGSL-LWGWLSDLANGRRALVACI 331 (467)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-----cCCCHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHCCCchHHHHH
Confidence 9999888888877777777778889888654 899999999999989999999988 9999999999888766544
Q ss_pred HHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhhhhHHHHhHHHHHHhhcCCcchhhHHhHHHHHHHHH-HHHHhhhHHH
Q 011783 353 VLTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIAMTGMSL-FKAAGPAGGG 431 (477)
Q Consensus 353 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~-g~~~~~~~~g 431 (477)
.+..++....... ...+ .. ...+..+..+++..+..........|.+|++.+|++.|+.+...++ |.+++|.+.|
T Consensus 332 ~~~~~~~~~~~~~-~~~~--~~-~~~~~~~~~G~~~~~~~~~~~~~~~~~~p~~~~g~a~gi~~~~g~l~g~~~~~~~~G 407 (467)
T PRK09556 332 ALALIIFTLGVYQ-HATS--EY-MYLASLFALGFLVFGPQLLIGVAAVGFVPKKAIGVANGIKGTFAYLFGDSFAKVGLG 407 (467)
T ss_pred HHHHHHHHHHHHH-hcCc--HH-HHHHHHHHHHHHHhhHHHHHHHHHHhhcchhhHHHHHHHHHHHHHHHhHHHHhhhHH
Confidence 4333332222221 1111 11 1112222223222222333345667999999999999999999997 7799999999
Q ss_pred HHHHH-hhhhc-cccCCCCchHHHHHHHHHHHHHHHHHhh
Q 011783 432 ALFSW-AQKRL-DASFLPGSQMVFFVLNVVEAIGVLMTFK 469 (477)
Q Consensus 432 ~l~~~-~~~~~-~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 469 (477)
.+.|. ..... ......||+..|.+..++.+++.+..+.
T Consensus 408 ~i~~~~~~g~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~ 447 (467)
T PRK09556 408 MIADPTKNGTPIFGYTLTGWAGTFAALDIAAIGCICLMAI 447 (467)
T ss_pred HHhcccccccccccccccChHHHHHHHHHHHHHHHHHHHH
Confidence 99982 10000 0000127999999988888887766554
No 3
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=100.00 E-value=2.5e-38 Score=281.51 Aligned_cols=397 Identities=19% Similarity=0.152 Sum_probs=305.9
Q ss_pred CCCCchhHHHHHHHHHHHhhhchhchHhHHHHHHHHhcccccchhhhhhhHHHHHHHHHHHHHHhhhhhhhhhhcCCchh
Q 011783 35 KSGLPITELFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPV 114 (477)
Q Consensus 35 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~Grr~~ 114 (477)
.++.+++.+..+++++...++.+-.++...|.+.+|.++|.+| .|++.+++.+.|.++..+.|.++||.+.|+.
T Consensus 23 y~~~r~qif~~~fiGYa~fYl~RknF~~a~p~l~e~~~lsk~~------lG~i~s~f~i~YG~sKf~~G~~sDr~npr~f 96 (448)
T COG2271 23 YKRWRIQIFLSIFIGYAAFYLTRKNFNLAMPALIEDGGLSKTQ------LGILGSAFSITYGVSKFVMGVLSDRSNPRYF 96 (448)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhHhhccHHHHHhcCCCHHH------HHHHHHHHHHHHHHHHHHhhhhcccCCCcee
Confidence 3455556677888999999999999999999999999999999 9999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHhhhhHHHHHHHHHHhhhcccchhhH-HHHhhhhccccchhhHHHHHHHHhHHHHHHHHhHH--H
Q 011783 115 IIMGTASVVIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALG--G 191 (477)
Q Consensus 115 ~~~~~~~~~i~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~--~ 191 (477)
+..++++.++..++++++++.+.+.+.-+++|+++|+-.|. ...++.|+|++|||+..++++.+.++|..+.|++. +
T Consensus 97 m~~gLilsai~nil~Gfs~s~~~~~~l~~lng~fQg~Gwpp~~~~i~~Wfsr~eRG~~~siWn~shNiGGal~~~~~~la 176 (448)
T COG2271 97 MAFGLILSAIVNILFGFSPSLFLFAVLWVLNGWFQGMGWPPCARTITHWFSRKERGTWWSIWNTSHNIGGALAPLVALLA 176 (448)
T ss_pred ehHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHcCccccCceEEEehhhhhcccchHHHHHHHH
Confidence 99999999999999999999999999999999999997766 99999999999999999999999999999999999 7
Q ss_pred HhhhccccCCcccccccccccccch--HHHHHHHHHhhccccccCCCCCCccchhhhhhhhhhccchhhcccC-----Cc
Q 011783 192 FLAQPAEKYPNLFSSESLFGKFPYF--LPCLCISLFAFGETLHRHNDDDDSCDVSYDALESASAEVKEEEGRE-----AT 264 (477)
Q Consensus 192 ~l~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~ 264 (477)
++.. .++||..| ..+-. ++..+..+..+.++|+..--++-|+-+. +..+.. +++++++ ..
T Consensus 177 ~~~~-------~~~w~~~f-~~pgiiaiival~~~~~~rd~Pqs~GLP~ie~~~~-d~~e~~----~~~~~~~~ls~~~i 243 (448)
T COG2271 177 FFAF-------HGGWRAAF-YFPGIIAIIVALILLFLLRDRPQSEGLPPIEEYRG-DPLEIY----EEEKENEGLTAWQI 243 (448)
T ss_pred HHHh-------ccchhHHH-HHHHHHHHHHHHHHHHHhCCCccccCCCCHHHhhc-Cchhhh----hhhccCCCccHHHH
Confidence 7776 34666665 22222 2222333344455554432211111000 111110 1111111 12
Q ss_pred hhhhhhcchhhHHHHHHHHHHHhhhhhhHHHHHHhhcCcccCCccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHhh--
Q 011783 265 PKKSLLKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERIL-- 342 (477)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~-- 342 (477)
-.+.+++||.+|.+.+.+.+....-++...+.|+|+.+. .|+|..+++...+.+-++++.+.+ +.||++||.
T Consensus 244 ~~~YVL~Nk~iW~la~a~vfvYivR~gi~dW~p~YL~e~-----k~~s~~~a~~a~~lfE~agl~G~L-l~GwlSDklfk 317 (448)
T COG2271 244 FVKYVLKNKLIWLLALANVFVYVVRYGINDWGPLYLSEV-----KGFSLVKANWAISLFEVAGLPGTL-LAGWLSDKLFK 317 (448)
T ss_pred HHHHHHcChHHHHHHHHHHHHHHHHHHHhhhHHHHHHHh-----cCCCHHHHHHHHHHHHHHhhHHHH-HHHHHHHHhcc
Confidence 456688999999999999999999999999999999876 899999999999999999999998 999999996
Q ss_pred cchhHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhhhhHHHHhHHHHHHhhcCCcchhhHHhHHHHHHHHH-
Q 011783 343 GPIMVARIAGVLTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIAMTGMSL- 421 (477)
Q Consensus 343 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~- 421 (477)
|||....+...+.....+...+..... ......++.+..|++..+..-..-....|..|++..|++.|+...+.++
T Consensus 318 grR~p~~~i~~~~i~~~~~~~w~~~~~---~~~l~~~~l~~iGf~IyGPqmLiGl~a~e~~pK~AaGtA~Gf~Glf~Yl~ 394 (448)
T COG2271 318 GRRGPMALIFMLLITASLVLYWLAPNG---SYLLDAILLFIIGFLIYGPQMLIGLAAAEFVPKKAAGTATGFVGLFAYLI 394 (448)
T ss_pred cccchHHHHHHHHHHHHHHHHHcCCCc---cHHHHHHHHHHHHHHHhhHHHHHHHHHhccccHhhccchhchhhhHHHHh
Confidence 455554444433333333322222211 2233344444445555555556666788999999999999999999999
Q ss_pred HHHHhhhHHHHHHHHhhhhccccCCCCchHHHHHHHHHHHHHHHHHhh
Q 011783 422 FKAAGPAGGGALFSWAQKRLDASFLPGSQMVFFVLNVVEAIGVLMTFK 469 (477)
Q Consensus 422 g~~~~~~~~g~l~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 469 (477)
|.+.+....|++.|.+ ||...|++..+.++++.++.+.
T Consensus 395 Ga~~a~~~~g~i~d~~----------gW~g~Fi~~~~~a~l~~lll~~ 432 (448)
T COG2271 395 GAALAGLPLGYIADTW----------GWDGGFIVLSIAALLAILLLLP 432 (448)
T ss_pred hHHhcCCcceeeEecC----------CCcchHHHHHHHHHHHHHHHHH
Confidence 8899999999998886 8989999888888877776655
No 4
>PRK11663 regulatory protein UhpC; Provisional
Probab=100.00 E-value=8.6e-37 Score=294.24 Aligned_cols=395 Identities=14% Similarity=0.094 Sum_probs=276.9
Q ss_pred hhHHHHHHHHHHHhhhchhchHhHHHHHHHHhcccccchhhhhhhHHHHHHHHHHHHHHhhhhhhhhhhcCCchhhHHHH
Q 011783 40 ITELFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGT 119 (477)
Q Consensus 40 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~Grr~~~~~~~ 119 (477)
++.+....+..++.+++...+...+|.+.+++|.+..+ .|++.+.+.+++.+++++.|+++||+|||+++.++.
T Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~------~g~~~~~~~~~~~~~~~~~G~l~dr~g~r~~~~~~~ 95 (434)
T PRK11663 22 RHILITMYLGYALFYFTRKSFNAAMPEMLADLGLSRSD------IGLLATLFYITYGVSKFVSGIVSDRSNARYFMGIGL 95 (434)
T ss_pred HHHHHHHHHHHHHHHHhhhhHHHhhHHHHHhcCCCHHH------HHHHHHHHHHHHHHHHhhhhHHHhhcCCchhHHHHH
Confidence 34455667777777888888899999999999999999 999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhhhHHHHHHHHHHhhhcccchhhH-HHHhhhhccccchhhHHHHHHHHhHHHHHHHHhHHHHhhhccc
Q 011783 120 ASVVIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAE 198 (477)
Q Consensus 120 ~~~~i~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~ 198 (477)
++.+++.+++++++|++.+++.|++.|++.|...+. .+++.|++|+++|++++++.+.+.++|..++|.+++++.+
T Consensus 96 ~~~~~~~~~~~~~~~~~~l~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~l~~--- 172 (434)
T PRK11663 96 IATGIINILFGFSSSLWAFALLWVLNAFFQGWGWPVCAKLLTAWYSRTERGGWWAIWNTAHNVGGALIPLVVGAIAL--- 172 (434)
T ss_pred HHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHccchHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---
Confidence 999999999999999999999999999998887777 9999999999999999999999999999999999999887
Q ss_pred cCCcccccccccccccch-HHHHHHHHHhhccccccCCCCCCccchhhhhhhhhhccchhhcccCCchh-hhhhcchhhH
Q 011783 199 KYPNLFSSESLFGKFPYF-LPCLCISLFAFGETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPK-KSLLKNWPLM 276 (477)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 276 (477)
.++||+.|...... ....+...+.++|++.+...++.+..+. ++.+.. .+.+.++.+..... ...++++.++
T Consensus 173 ----~~gw~~~f~~~~i~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~-~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (434)
T PRK11663 173 ----HYGWRYGMMIAGIIAIVVGLFLCWRLRDKPQAMGLPSVGEWRH-DALELA-QQQEGAGLSRKEILTKYVLLNPYIW 246 (434)
T ss_pred ----cccHHHHHHHHHHHHHHHHHHHHHHcCCCHhhcCCCCcccccc-cccccc-hhccccCCChhhhHHHHHhcChHHH
Confidence 45566555211111 1122223344566554321111000000 000000 00000000111111 2356788888
Q ss_pred HHHHHHHHHHhhhhhhHHHHHHhhcCcccCCccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHhh--cchhHH-HHHHH
Q 011783 277 SSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERIL--GPIMVA-RIAGV 353 (477)
Q Consensus 277 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~--~~~~~~-~~~~~ 353 (477)
...+..++..........+.|.|+.+. +|++..+.+...+...++..++++ +.+++.||+ ++|+.. .....
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~p~~l~~~-----~g~s~~~a~~~~~~~~~~~~~g~~-~~g~l~dr~~~~~r~~~~~~~~~ 320 (434)
T PRK11663 247 LLSFSYVLVYVVRAAINDWGNLYMSET-----LGVDLVTANSAVSMFELGGFIGAL-VAGWGSDKLFNGNRGPMNLIFAA 320 (434)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhc-----cCCCHHHHHHHHHHHHHHHHHHHH-HHhhhHHHhccCCccHHHHHHHH
Confidence 877776666666666777888887543 799999999999999999999998 999999998 333222 22111
Q ss_pred HHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhhhhHHHHhHHHHHHhhcCCcchhhHHhHHHHHHHHHHHHHhhhHHHHH
Q 011783 354 LTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIAMTGMSLFKAAGPAGGGAL 433 (477)
Q Consensus 354 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l 433 (477)
...+....+..... .+ .... ....+..+++.............|..|++.|+++.|+.++..++|++++|.+.|.+
T Consensus 321 ~~~~~~~~~~~~~~-~~--~~~~-~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~p~~~g~l 396 (434)
T PRK11663 321 GILLSVGSLWLMPF-AS--YVMQ-AACFFTIGFFVFGPQMLIGMAAAECSHKEAAGAATGFVGLFAYLGAALSGYPLAKV 396 (434)
T ss_pred HHHHHHHHHHHccc-cc--HHHH-HHHHHHHHHHHhhHHHHHHHHHHhcccHhhHHhHHHHHHHHHHHHHHHhcccHHHH
Confidence 11111111111111 11 1111 11112122222222233345667889999999999999999999999999999999
Q ss_pred HHHhhhhccccCCCCchHHHHHHHHHHHHHHHHHhh
Q 011783 434 FSWAQKRLDASFLPGSQMVFFVLNVVEAIGVLMTFK 469 (477)
Q Consensus 434 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 469 (477)
.|+. ||+..|++.+++.+++.+..+.
T Consensus 397 ~~~~----------g~~~~f~~~~~~~~~~~~~~~~ 422 (434)
T PRK11663 397 LEIW----------HWTGFFVVISIAAGISALLLLP 422 (434)
T ss_pred HHhc----------ccHHHHHHHHHHHHHHHHHHHH
Confidence 9987 8889999998888887765554
No 5
>PRK03545 putative arabinose transporter; Provisional
Probab=100.00 E-value=3e-36 Score=287.08 Aligned_cols=370 Identities=14% Similarity=0.090 Sum_probs=271.5
Q ss_pred chhHHHHHHHHHHHhhhchhchHhHHHHHHHHhcccccchhhhhhhHHHHHHHHHHHHHHhhhhhhhhhhcCCchhhHHH
Q 011783 39 PITELFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMG 118 (477)
Q Consensus 39 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~Grr~~~~~~ 118 (477)
+|..++.+.+..++.........+.+|.+.+|+|.++++ .|++.+.+.+++.+++++.|+++||+|||+++..+
T Consensus 7 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~s~~~------~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~ 80 (390)
T PRK03545 7 AWLRVVTLALAAFIFNTTEFVPVGLLSDIAQSFHMQTAQ------VGLMLTIYAWVVALMSLPLMLLTSNVERRKLLIGL 80 (390)
T ss_pred chHHHHHHHHHHHHHHhHHHHHHcchHHHHhHcCCCHHH------HHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHH
Confidence 344455555555555445555667789999999999999 99999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhhhHHHHHHHHHHhhhcccchhhH-HHHhhhhccccchhhHHHHHHHHhHHHHHHHHhHHHHhhhcc
Q 011783 119 TASVVIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPA 197 (477)
Q Consensus 119 ~~~~~i~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~ 197 (477)
.++.+++.+.+++++|++++++.|+++|++.+...+. .+++.|++|+|+|++++++...+.++|..+||++++.+.+
T Consensus 81 ~~~~~~~~~~~~~~~~~~~l~~~r~~~G~~~~~~~~~~~~~i~~~~~~~~r~~~~g~~~~~~~~g~~ig~~l~~~l~~-- 158 (390)
T PRK03545 81 FVLFIASHVLSALAWNFTVLLISRIGIAFAHAIFWSITASLAIRVAPAGKKAQALSLLATGTALAMVLGLPLGRVIGQ-- 158 (390)
T ss_pred HHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChhhhhhHHHHHHHHHHHHHHHHhhHHHHHHH--
Confidence 9999999999999999999999999999999888887 9999999999999999999999999999999999999887
Q ss_pred ccCCcccccccccccccchHH-HHHHHHHhhccccccCCCCCCccchhhhhhhhhhccchhhcccCCchhhhhhcchhhH
Q 011783 198 EKYPNLFSSESLFGKFPYFLP-CLCISLFAFGETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKSLLKNWPLM 276 (477)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 276 (477)
.++||+.|........ ........+||.++ ++.+ ..+..++.+|+|.++
T Consensus 159 -----~~gw~~~f~~~~~~~~l~~~~~~~~~~~~~~------~~~~-------------------~~~~~~~~~~~~~~~ 208 (390)
T PRK03545 159 -----YLGWRTTFLAIGGGALITLLLLIKLLPLLPS------EHSG-------------------SLKSLPLLFRRPALV 208 (390)
T ss_pred -----HhcHHHHHHHHHHHHHHHHHHHHHhCCCCCC------CCcc-------------------hHHHHHHHHhCcHHH
Confidence 4566655521111111 11111122232211 0000 012345678888887
Q ss_pred HHHHHHHHHHhhhhhhHHHHHHhhcCcccCCccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHH
Q 011783 277 SSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTI 356 (477)
Q Consensus 277 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 356 (477)
......++..........+.+.+..+. .|.++.+.+.+....+++.++++. +.+++.||.++|... .+..+..
T Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~l~~~-----~g~s~~~~~~~~~~~~~~~~~g~~-~~g~l~dr~~~~~~~-~~~~~~~ 281 (390)
T PRK03545 209 SLYLLTVVVVTAHFTAYSYIEPFVQQV-----AGLSENFATLLLLLFGGAGIIGSV-LFSRLGNRHPSGFLL-IAIALLL 281 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHh-----cCCCccHHHHHHHHHHHHHHHHHH-HHHHHhhccchhHHH-HHHHHHH
Confidence 665555544444444444555554432 688899999999999999999988 889999999877654 3433333
Q ss_pred HHHHHHHHHHHhhhhhHHHHHHHHHHHHhhhhHHHHhHHHHHHhhcCCcchhhHHhHHHHHHHHHHHHHhhhHHHHHHHH
Q 011783 357 PLLTSYPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIAMTGMSLFKAAGPAGGGALFSW 436 (477)
Q Consensus 357 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~ 436 (477)
.....+..... +. + .+....++.+++.....+.......+..| +.+++++|+.+...++|..+||.+.|.+.++
T Consensus 282 ~~~~~l~~~~~--~~--~-~~~~~~~l~g~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~~G~~~~G~~~~~ 355 (390)
T PRK03545 282 VCLLLLLPAAN--SE--W-HLSVLSIFWGIAIMCIGLAMQVKVLKLAP-DATDVAMALFSGIFNIGIGAGALLGNQVSLH 355 (390)
T ss_pred HHHHHHHHHhc--hH--H-HHHHHHHHHHHHHhcchHHHHHHHHHhCC-CcHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 33322221111 11 1 22223333444545555666677777666 6889999999999999999999999999998
Q ss_pred hhhhccccCCCCchHHHHHHHHHHHHHHHHHhh
Q 011783 437 AQKRLDASFLPGSQMVFFVLNVVEAIGVLMTFK 469 (477)
Q Consensus 437 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 469 (477)
. |++..|.+.+++.+++.+..+.
T Consensus 356 ~----------g~~~~~~~~~~~~~~~~~~~~~ 378 (390)
T PRK03545 356 L----------GLSSIGYVGAALALAALVWSIL 378 (390)
T ss_pred c----------ChhHHHHHHHHHHHHHHHHHHH
Confidence 8 8999999999888888777665
No 6
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=100.00 E-value=3.5e-36 Score=299.01 Aligned_cols=410 Identities=16% Similarity=0.111 Sum_probs=287.8
Q ss_pred hhHHHHHHHHHHHhhhchhchHhHHHHHHHHhcccccchhhhhhhHHHHHHHHHHHHHHhhhhhhhhhhcCCchhhHHHH
Q 011783 40 ITELFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGT 119 (477)
Q Consensus 40 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~Grr~~~~~~~ 119 (477)
|..+.++.++.+...++...+...+|.+.++++.+..+ .+++.+++.++.+++++++|+++||+|||+++++++
T Consensus 166 ~~l~~i~~l~~~~~g~d~~~is~ilp~i~~~~gls~~~------~g~l~s~~~lG~iiG~li~G~LsDR~GRR~~lii~l 239 (742)
T TIGR01299 166 WALFFVLGLALMADGVEVFVVGFVLPSAEKDLCIPDSG------KGMLGLIVYLGMMVGAFFWGGLADKLGRKQCLLICL 239 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHH
Confidence 33344556666777778888899999999999999998 999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhhhHHHHHHHHHHhhhcccchhhH-HHHhhhhccccchhhHHHHHHHHhHHHHHHHHhHHHHhhhccc
Q 011783 120 ASVVIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAE 198 (477)
Q Consensus 120 ~~~~i~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~ 198 (477)
++.+++.++++++++++.++++|++.|++.|...|. .+++.|++|+++|++.++++..++.+|.++++.++..+... .
T Consensus 240 il~~i~~ll~afa~s~~~llv~R~l~G~g~g~~~p~~~~~isE~~p~~~Rg~~~g~~~~~~~iG~ila~~la~~il~~-~ 318 (742)
T TIGR01299 240 SVNGFFAFFSSFVQGYGFFLFCRLLSGFGIGGAIPIVFSYFAEFLAQEKRGEHLSWLCMFWMIGGIYAAAMAWAIIPH-Y 318 (742)
T ss_pred HHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-c
Confidence 999999999999999999999999999998888787 99999999999999999999999999999999998777652 3
Q ss_pred cCCc-------ccccccccccccchHHHHHHHHHhhccccccCCCCCC--ccchhhhhhhhh------------------
Q 011783 199 KYPN-------LFSSESLFGKFPYFLPCLCISLFAFGETLHRHNDDDD--SCDVSYDALESA------------------ 251 (477)
Q Consensus 199 ~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~--~~~~~~~~~~~~------------------ 251 (477)
+|+. ..+||..+.......+..++..+++||+|++...+.+ +..+..++....
T Consensus 319 G~~~~~g~~~~~~gWR~l~~i~~lp~ll~ll~~~~lPESPrwL~~~gr~~eA~~iL~~i~~~n~~~~~~~~~~~~~~~~~ 398 (742)
T TIGR01299 319 GWSFQMGSAYQFHSWRVFVIVCAFPCVFAIGALTFMPESPRFFLENGKHDEAWMILKLIHDTNMRAKGHPEKVFSVNHIK 398 (742)
T ss_pred cchhccccccccccHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHCCCHHHHHHHHHHHhcCCCCCcCchhHHHHHHHHH
Confidence 3332 1346665532222233344555678999887432211 111110110000
Q ss_pred --hccc---h-hhcccC----------------CchhhhhhcchhhHH---HHHHHHHHHhhhhhhHHHHHHhhcCc---
Q 011783 252 --SAEV---K-EEEGRE----------------ATPKKSLLKNWPLMS---SIIVYCVFSLHDMAYSEIFSLWANSP--- 303 (477)
Q Consensus 252 --~~~~---~-~~~~~~----------------~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~--- 303 (477)
.... + +.+... ....+.+++.+.... ..+.+++..+..++...++|..+...
T Consensus 399 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lf~~~~~~~tl~l~~~wf~~~~~yygl~~w~P~~~~~~~~~ 478 (742)
T TIGR01299 399 TIHQEDELIEIESDTGTWYQRCFVRALSEGGGIWGNFLRCFNPEVREITIKLMGVWFTLSFGYYGLSVWFPDMIKHLQAD 478 (742)
T ss_pred HhhhhhhhhcccccccchhhcchhhhhhhhhhHHHHHHHHcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 0000 0 000000 012344555544333 34445555556666667777543210
Q ss_pred -c------------cC-------C-------cc------cc---------------------------------------
Q 011783 304 -K------------KL-------G-------GL------NY--------------------------------------- 311 (477)
Q Consensus 304 -~------------~~-------~-------~~------g~--------------------------------------- 311 (477)
+ .. + ++ |+
T Consensus 479 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~ 558 (742)
T TIGR01299 479 DYAALTKNFPGDKVAHFSFNFTLENQIHRGGEYDNDKFIGLKFKSVSFEDSLFEECTFDDVTSSNTFFKNCTFIDTLFEN 558 (742)
T ss_pred HHHhhhccccccchhccccccchhhhhccccccccchhhcccccccccccccccccceeeccccchhhhccchhhhhccc
Confidence 0 00 0 00 00
Q ss_pred ---------------------------c-------hhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHH
Q 011783 312 ---------------------------S-------TQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTIP 357 (477)
Q Consensus 312 ---------------------------~-------~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 357 (477)
+ .........+..++.+++.+ +.+++.||+|||+++..+.++.++
T Consensus 559 ~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~l~~l~~i~G~i-l~g~L~Dr~GRr~~l~~~~~lsai 637 (742)
T TIGR01299 559 TDFEEYKFIDSEFQNCSFLHNKEGCPIDFDGDDEGAYMIYFVNFLGTLAVLPGNI-VSALLMDKIGRLRMLAGSMVLSCI 637 (742)
T ss_pred cchhhhhhhhhhhhhccccccCCccCccCCccchhHHHHHHHHHHHHHHHHHHHH-HHHHHHHHhCCHHHHHHHHHHHHH
Confidence 0 01123345566678888887 999999999999999999888888
Q ss_pred HHHHHHHHHHhhhhhHHHHHHHHHHHHhhhhHHHHhHHHHHHhhcCCcchhhHHhHHHHHHHHHHHHHhhhHHHHHHHHh
Q 011783 358 LLTSYPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIAMTGMSLFKAAGPAGGGALFSWA 437 (477)
Q Consensus 358 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~ 437 (477)
+++++.+..... .+++..++.+++..+..+..+.+++|.+|++.|++++|+.+....+|.+++|.++|.+.+..
T Consensus 638 ~~ll~~~~~s~~------~ll~~~~l~g~~~~~~~~~~~a~~aEl~Pt~~Rgta~Gi~~~~~rlGaiigp~i~g~L~~~~ 711 (742)
T TIGR01299 638 SCFFLSFGNSES------AMIALLCLFGGLSIAAWNALDVLTVELYPSDKRATAFGFLNALCKAAAVLGILIFGSFVGIT 711 (742)
T ss_pred HHHHHHHHccHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 877666543211 12222234455666778888999999999999999999999999999999999999888653
Q ss_pred hhhccccCCCCchHHHHHHHHHHHHHHHHHhhhhhhccC
Q 011783 438 QKRLDASFLPGSQMVFFVLNVVEAIGVLMTFKPFLAQRH 476 (477)
Q Consensus 438 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 476 (477)
...+|++.+++.+++.++.++ +||++
T Consensus 712 -----------~~~pf~i~a~~lll~~ll~~~--LPET~ 737 (742)
T TIGR01299 712 -----------KAAPILFASAALACGGLLALK--LPDTR 737 (742)
T ss_pred -----------hHHHHHHHHHHHHHHHHHHHh--CCCCc
Confidence 446788888877777776665 67765
No 7
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=100.00 E-value=7.3e-36 Score=292.12 Aligned_cols=375 Identities=15% Similarity=0.075 Sum_probs=286.7
Q ss_pred hhHHHHHHHHHHHhhhchhchHhHHHHHHHHhcccccchhhhhhhHHHHHHHHHHHHHHhhhhhhhhhhcCCchhhHHHH
Q 011783 40 ITELFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGT 119 (477)
Q Consensus 40 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~Grr~~~~~~~ 119 (477)
|..+..++++.++..++.++++..+|.+.+|+|.+.++ .+|+.++|.+++.++++++|+++||+|||++++.+.
T Consensus 5 ~~~~~~~~~~~~~~~ld~tiv~~a~p~i~~~l~~s~~~------~~~~~~~~~l~~~~~~~~~G~l~D~~Grk~~l~~~~ 78 (495)
T PRK14995 5 WLTLVIIVLVYIPVAIDATVLHVAAPTLSMTLGASGNE------LLWIIDIYSLVMAGMVLPMGALGDRIGFKRLLMLGG 78 (495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHhH------HHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHH
Confidence 45677889999999999999999999999999999999 999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhhhHHHHHHHHHHhhhcccchhhH-HHHhhhhc-cccchhhHHHHHHHHhHHHHHHHHhHHHHhhhcc
Q 011783 120 ASVVIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIF-REEHQALGLSTVSTAWGIGLIIGPALGGFLAQPA 197 (477)
Q Consensus 120 ~~~~i~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~-~~~i~~~~-~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~ 197 (477)
+++.++++++++++|+++++++|+++|++.+...|. ...+.+.+ |+++|+++++++.....+|..+||.+++++.+
T Consensus 79 ~~~~~~~~~~~~a~~~~~li~~r~l~G~g~~~~~~~~~~~l~~~~~~~~~r~~~~g~~~~~~~~g~~~gp~lgg~l~~-- 156 (495)
T PRK14995 79 TLFGLASLAAAFSPTASWLIATRALLAIGAAMIVPATLAGIRATFTEEKQRNMALGVWAAVGSGGAAFGPLVGGILLE-- 156 (495)
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc--
Confidence 999999999999999999999999999999888887 77777765 68999999999999999999999999999998
Q ss_pred ccCCcccccccccc-cccchHHHHHHHHHhhccccccCCCCCCccchhh------------hhhhhhh-cc---------
Q 011783 198 EKYPNLFSSESLFG-KFPYFLPCLCISLFAFGETLHRHNDDDDSCDVSY------------DALESAS-AE--------- 254 (477)
Q Consensus 198 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~------------~~~~~~~-~~--------- 254 (477)
.++||+.|. ..+..++..++....+|+.+..++++.+...... ++..... ..
T Consensus 157 -----~~gwr~~f~i~~~~~~~~~~l~~~~l~~~~~~~~~~~d~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 231 (495)
T PRK14995 157 -----HFYWGSVFLINVPIVLVVMGLTARYVPRQAGRRDQPLNLGHALMLIVAILLLVYSAKTALKGFLSLWVTSLTLLT 231 (495)
T ss_pred -----cCChHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCCCCChHhHHHHHHHHHHHHHHHHhccccCCchHHHHHHHHH
Confidence 345555542 1222233333444555654332111111100000 0000000 00
Q ss_pred ---------chhhcccCCchhhhhhcchhhHHHHHHHHHHHhhhhhhHHHHHHhhcCcccCCccccchhhhHHHHHHHHH
Q 011783 255 ---------VKEEEGREATPKKSLLKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGF 325 (477)
Q Consensus 255 ---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~ 325 (477)
..|.+.+.+....+++|+|.+....+..++..........+.|.|++.. +|+++.++|..+.+..+
T Consensus 232 ~~~~l~~f~~~e~~~~~p~~~~~lf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lq~v-----~g~s~~~ag~~~~~~~~ 306 (495)
T PRK14995 232 GALLLGLFIRTQLAASRPMIDMRLFTHRIILSGVVMAMTAMITLVGFELLMAQELQFV-----HGLSPLEAGMFMLPVMV 306 (495)
T ss_pred HHHHHHHHHHHHhcCCCCCcCHHHhCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----cCCCHHHHHHHHHHHHH
Confidence 0112223334446788999888877777776666666667778777755 79999999999999999
Q ss_pred HHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhhhhHHHHhHHHHHHhhcCCc
Q 011783 326 SLLVFQLSLYPFLERILGPIMVARIAGVLTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVDQ 405 (477)
Q Consensus 326 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 405 (477)
+..++.+ +.+++.||+|+|+.+..+..+..++...+.......+. + .......+.+++.+...+.......+.+|+
T Consensus 307 ~~~~~~~-~~g~l~~r~g~~~~~~~g~~~~~~~~~~l~~~~~~~~~--~-~~~~~~~l~G~g~g~~~~~~~~~~~~~~~~ 382 (495)
T PRK14995 307 ASGFSGP-IAGILVSRLGLRLVATGGMALSALSFYGLAMTDFSTQQ--W-QAWGLMALLGFSAASALLASTSAIMAAAPP 382 (495)
T ss_pred HHHHHHH-HHHHHHHHcCchHHHHHHHHHHHHHHHHHHHhcCCCch--H-HHHHHHHHHHHhHHHHHHHHHHHHHhcCCH
Confidence 9999988 89999999999998888887777666555443221111 1 122334445666777777778888888999
Q ss_pred chhhHHhHHHHHHHHHHHHHhhhHHHHHHHH
Q 011783 406 DQRGAANGIAMTGMSLFKAAGPAGGGALFSW 436 (477)
Q Consensus 406 ~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~ 436 (477)
++++.+.++.++.+++|+.+|+.+.|.++++
T Consensus 383 ~~~g~~~~~~~~~~~lG~~~G~ai~g~i~~~ 413 (495)
T PRK14995 383 EKAAAAGAIETMAYELGAGLGIAIFGLLLSR 413 (495)
T ss_pred HhcchHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999875
No 8
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=100.00 E-value=7e-37 Score=292.38 Aligned_cols=396 Identities=13% Similarity=0.043 Sum_probs=276.7
Q ss_pred CCchhHHHHHHHHHHHhhhchhchHhHHHHHHHHhcccccchhhhhhhHHHHHHHHHHHHHHhhhhhhhhhhcCCchhhH
Q 011783 37 GLPITELFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVII 116 (477)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~Grr~~~~ 116 (477)
+.+|+.+..+++..++++++...++...|.+.+|+|.+..+ .|++.+++.+++.+++++.|+++||+|||+++.
T Consensus 4 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~l~~~~~~s~~~------~g~~~s~~~~~~~~~~~~~g~l~dr~G~r~~~~ 77 (412)
T TIGR02332 4 KLFRRLIIFLFILFIFSFLDRINIGFAGLTMGKDLGLSATM------FGLAATLFYAAYVICGIPSNIMLAIIGARRWIA 77 (412)
T ss_pred eehhHHHHHHHHHHHHHHhhhhhHHHHHHhhHhhcCCCHHH------HHHHHHHHHHHHHHHHhhHHHHHHHhChHHHHH
Confidence 34567788888899999999999999999999999999999 999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhhhhHHHHHHHHHHhhhcccchhhH-HHHhhhhccccchhhHHHHHHHHhHHHHHHHHhHHHHhhh
Q 011783 117 MGTASVVIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQ 195 (477)
Q Consensus 117 ~~~~~~~i~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~ 195 (477)
.+.++++++.+++++++|++++++.|+++|++.+...|. ..++.|++|+++|++++++++.+.++|..+++++++++.+
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~l~~ 157 (412)
T TIGR02332 78 GIMVLWGIASTATMFATGPESLYLLRILVGIAEAGFLPGILLYLTFWFPAYFRARANALFMIAMPVTMALGLILSGYILA 157 (412)
T ss_pred HHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 999999999999999999999999999999999998888 8899999999999999999999999999999999998874
Q ss_pred ccccCCcccccccccccccc-hHHHHHHHHHhhccccccCCCC-CCccchhhhhhhhhh---ccchhh--ccc--CCchh
Q 011783 196 PAEKYPNLFSSESLFGKFPY-FLPCLCISLFAFGETLHRHNDD-DDSCDVSYDALESAS---AEVKEE--EGR--EATPK 266 (477)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~~~~~~~~~-~~~~~~~~~~~~~~~---~~~~~~--~~~--~~~~~ 266 (477)
... .-...+||+.|..... .+...++..+++||+++..+.. +++.+...+..+.+. ++.++. +.+ ....+
T Consensus 158 ~~~-~~~~~gwr~~f~~~~~~~l~~~~~~~~~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (412)
T TIGR02332 158 LDG-LMALKGWQWLFLLEGFPSVILGVMTWFWLDDSPDKAKWLDEEDKKALKEMIDNDQLTLEQPEGAFAHAAMPQRSML 236 (412)
T ss_pred CCC-CCCccchhHHHHHHHHHHHHHHHHHhhccCCCcccCCCCCHHHHHHHHHHHHhccccccccccccccccccHHHHH
Confidence 210 0002345544421111 1222233344567776532211 111111000000000 000000 000 01123
Q ss_pred hhhhcchhhHHHHHHHHHHHhhhhhhHHHHHHhhcCcccCCccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcchh
Q 011783 267 KSLLKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIM 346 (477)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 346 (477)
++++ ++.++...+.+++.......+..+.|.++.+. +.+.+..+.+.......++.+++.+ +.++++||+++|+
T Consensus 237 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~----~~~~s~~~~~~~~~~~~l~~~~g~l-~~g~l~dr~~~r~ 310 (412)
T TIGR02332 237 REIF-TPAIMLYTLAYFCLTNTLSAINIWTPQILQSF----NQGSSNIMIGLLAAIPQFCTIFGMI-WWSRHSDRLKERK 310 (412)
T ss_pred HHhc-ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc----CCCCcHHHhHHHhhHHHHHHHHHHH-HHHHHhcccCccH
Confidence 3333 57777777777777777777888889888641 2467788889999999999999988 9999999998766
Q ss_pred H-HHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhhhhHHHHhHHHHHHhhcCCcchhhHHhHHHHHHHHHHHHH
Q 011783 347 V-ARIAGVLTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIAMTGMSLFKAA 425 (477)
Q Consensus 347 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~ 425 (477)
. ......+..+++... ... ... ......+... .++.....+.......+.+|++.|+++.|+.+...++|+++
T Consensus 311 ~~~~~~~~~~~~~~~~~-~~~--~~~-~~~~~~~~~~--~~g~~~~~~~~~~~~~~~~~~~~~~~a~g~~~~~~~~g~~~ 384 (412)
T TIGR02332 311 HHTALPYLFAAAGWLLA-SAT--DHN-LIQLLGIIMA--SMGSFSAMAIFWTTPDQSISLQARAIAIAVINATGNIGSAL 384 (412)
T ss_pred HHHHHHHHHHHHHHHHH-Hhc--CCH-HHHHHHHHHH--HHHhhhhhhHHHhhcccccchHHHHHHHHHHHHhhhhhhhh
Confidence 4 333333333332211 111 111 1111111111 12222223333445567789999999999999999999999
Q ss_pred hhhHHHHHHHHhhhhccccCCCCchHHHHHHHHHH
Q 011783 426 GPAGGGALFSWAQKRLDASFLPGSQMVFFVLNVVE 460 (477)
Q Consensus 426 ~~~~~g~l~~~~~~~~~~~~~~g~~~~~~~~~~~~ 460 (477)
+|.+.|.+.+.. ++|+..+.+.+++.
T Consensus 385 ~p~~~g~i~~~~---------g~~~~~~~~~~~~~ 410 (412)
T TIGR02332 385 SPFLIGILKDAT---------GSFNSGLWFVAALL 410 (412)
T ss_pred hhhhcccccccC---------CCCchhHHHHHHHH
Confidence 999999999876 14778887766544
No 9
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=100.00 E-value=4.5e-36 Score=287.94 Aligned_cols=378 Identities=18% Similarity=0.094 Sum_probs=277.3
Q ss_pred CchhHHHHHHHHHHHhhhchhchHhHHHHHHHHhcccccchhhhhhhHHHHHHHHHHHHHHhhhhhhhhhhcCCchhhHH
Q 011783 38 LPITELFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIM 117 (477)
Q Consensus 38 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~Grr~~~~~ 117 (477)
++|..+...++..+++.++.....+..|.+.+|+|.++++ .|++.+++.++..+++++.|+++||+|||+++..
T Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~------~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~ 85 (406)
T PRK11551 12 RLALTIGLCFLVALLEGLDLQSAGVAAPRMAQEFGLDVAQ------MGWAFSAGILGLLPGALLGGRLADRIGRKRILIV 85 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHH
Confidence 4455677778888999999999999999999999999999 9999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhhhhHHHHHHHHHHhhhcccchhhH-HHHhhhhccccchhhHHHHHHHHhHHHHHHHHhHHHHhhhc
Q 011783 118 GTASVVIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQP 196 (477)
Q Consensus 118 ~~~~~~i~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~ 196 (477)
+.++..++.++++++++++.+++.|++.|++.+...+. .+++.|++|+++|++++++.+.+..+|..+++.+++.+.+
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~- 164 (406)
T PRK11551 86 SVALFGLFSLATAQAWDFPSLLVARLLTGVGLGGALPNLIALTSEAVGPRLRGTAVSLMYCGVPFGGALASVIGVLAAG- 164 (406)
T ss_pred HHHHHHHHHHHHHHhccHHHHHHHHHHHHhhHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc-
Confidence 99999999999999999999999999999998888887 9999999999999999999999999999999999888766
Q ss_pred cccCCcccccccccccccc-hHHHHHHHHHhhccccccCCCCCCccchhhhhhhhhhccchhhcccCCchhhhhhc---c
Q 011783 197 AEKYPNLFSSESLFGKFPY-FLPCLCISLFAFGETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKSLLK---N 272 (477)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~ 272 (477)
.++|+..+..... .....+.....+||++++.++++++.+ + +...+..++ +
T Consensus 165 ------~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~----------------~---~~~~~~~~~~~~~ 219 (406)
T PRK11551 165 ------DAAWRHIFYVGGVGPLLLVPLLMRWLPESRAFAQAAGAGKQ----------------R---APVLRALFGEGRA 219 (406)
T ss_pred ------ccCHHHHHHHHHHHHHHHHHHHHHhCCCChhHHhccCcchh----------------h---hhhHHHHhhhhhh
Confidence 4455554421111 111222233345665543221110000 0 001111111 1
Q ss_pred hhhHHHHHHHHHHHhhhhhhHHHHHHhhcCcccCCccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHH
Q 011783 273 WPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAG 352 (477)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 352 (477)
+..+......++..........+.|.+..+ .|+++.+.+.......++.+++++ +.+++.||.++|+.+..+.
T Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~------~g~s~~~~~~~~~~~~~~~~~~~~-~~g~l~dr~g~~~~~~~~~ 292 (406)
T PRK11551 220 TATLLLWISYFFTLIVLYFLLNWLPSLLVG------QGLSRSQAGLVQIAFNIGGALGSL-LIGALMDRLRPRRVVLLIY 292 (406)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHh------CCCChhhhhHHHHHHHHHHHHHHH-HHHHHHHHHhHHHHHHHHH
Confidence 222222233333333334445566666543 688999999999999999999988 8999999999999888766
Q ss_pred HHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhhhhHHHHhHHHHHHhhcCCcchhhHHhHHHHHHHHHHHHHhhhHHHH
Q 011783 353 VLTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIAMTGMSLFKAAGPAGGGA 432 (477)
Q Consensus 353 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~ 432 (477)
....+++..+..... . + ......++.+++..+..+...++..+.+|+++|+++.|+.+....+|..++|.+.|.
T Consensus 293 ~~~~~~~~~~~~~~~---~--~-~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~g~~~~g~ 366 (406)
T PRK11551 293 AGILASLAALAAAPS---F--A-GMLLAGFAAGLFVVGGQSVLYALAPLFYPTQVRGTGVGAAVAVGRLGSMAGPLLAGQ 366 (406)
T ss_pred HHHHHHHHHHHhcCc---H--H-HHHHHHHHHHHHHHhHHHHHHHHHHHHcchhhhhhhhhHHHHhhhHHHHHHhhhHhh
Confidence 655555444433221 1 1 122233444555566777888899999999999999999999999999999999999
Q ss_pred HHHHhhhhccccCCCCchHHHHHHHHHHHHHHHHHhh
Q 011783 433 LFSWAQKRLDASFLPGSQMVFFVLNVVEAIGVLMTFK 469 (477)
Q Consensus 433 l~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 469 (477)
+.++.. ++...++....+.+++.++.+.
T Consensus 367 l~~~~~---------~~~~~~~~~~~~~~~~~~~~~~ 394 (406)
T PRK11551 367 LLALGR---------STVGVIGASIPVILVAALAALL 394 (406)
T ss_pred hhccCC---------chHHHHHHHHHHHHHHHHHHHH
Confidence 998641 4555666666666665555544
No 10
>TIGR00893 2A0114 d-galactonate transporter.
Probab=100.00 E-value=3.3e-36 Score=288.47 Aligned_cols=388 Identities=16% Similarity=0.105 Sum_probs=279.8
Q ss_pred HHHhhhchhchHhHHHHHHHHhcccccchhhhhhhHHHHHHHHHHHHHHhhhhhhhhhhcCCchhhHHHHHHHHHHHHHH
Q 011783 50 VLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLF 129 (477)
Q Consensus 50 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~Grr~~~~~~~~~~~i~~~~~ 129 (477)
.++..++...+....|.+.+++|.++.+ .|++.+++.++..+++++.|+++||+|||+++..+.++.+++.+++
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~g~s~~~------~~~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~ 76 (399)
T TIGR00893 3 TVINYLDRANLSFAAPMLQEDLGLSAAQ------YGYVFSAFSWGYVVGQFPGGWLLDRFGARKTLAVFIVIWGVFTGLQ 76 (399)
T ss_pred ehHHHHHHHhhhHhHHHHHHhhCCChhh------HHHHHHHHHHHHHHHHHhHHHHHHhcCcceeeHHHHHHHHHHHHHH
Confidence 3456778888889999999999999999 9999999999999999999999999999999999999999999999
Q ss_pred HhhhhHHHHHHHHHHhhhcccchhhH-HHHhhhhccccchhhHHHHHHHHhHHHHHHHHhHHHHhhhccccCCccccccc
Q 011783 130 GLSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSES 208 (477)
Q Consensus 130 ~~~~~~~~l~~~r~l~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~~~~~~ 208 (477)
++++|++.+++.|++.|++.+...+. .+++.|++|+|+|++++++.+....+|..++|.+++.+.+ ..+|+.
T Consensus 77 ~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~-------~~~~~~ 149 (399)
T TIGR00893 77 AFAGAYVSLYILRVLLGAAEAPFFPGIILIVASWFPASERATAVSIFNSAQGLGGIIGGPLVGWILI-------HFSWQW 149 (399)
T ss_pred HHHcCHHHHHHHHHHHHHHHHhhhhHHHHHHHHhCCHHHHHHHHHHHHHhchHHHHHHHHHHHHHHH-------hCCchH
Confidence 99999999999999999999988887 9999999999999999999999999999999999998887 334544
Q ss_pred ccccccch-HHHHHHHHHhhccccccCCCCCCccchhhhhhhhhhccchhhcccCCchhhhhhcchhhHHHHHHHHHHHh
Q 011783 209 LFGKFPYF-LPCLCISLFAFGETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKSLLKNWPLMSSIIVYCVFSL 287 (477)
Q Consensus 209 ~~~~~~~~-~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (477)
.+...... ....+...+..+|+++.++..+++.+....+....+.+.++++++.....++.+++|+++...+..++...
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (399)
T TIGR00893 150 AFIIEGVLGIIWGVLWLKFIPDPPQKAKWLTEEEKYIVVGGLLAEQQGKGPSTPKKYQIKELLKDRRVWGLALGQFLVNI 229 (399)
T ss_pred HHHHHHHHHHHHHHHhhheecCCCCccccCCHHHHhhcchhhccccccccccCCCccchHHHhcCHHHHHHHHHHHHHHh
Confidence 44111111 11112222234444332211111111000000000001111122334456788899999988888888887
Q ss_pred hhhhhHHHHHHhhcCcccCCccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcchhH--HHHHHHHHHH--HHHHHH
Q 011783 288 HDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMV--ARIAGVLTIP--LLTSYP 363 (477)
Q Consensus 288 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~--~~~~~~~~~~--~~~~~~ 363 (477)
....+..+.|.|..+. +|.++.+.+.......++.+++.+ +.+++.||+++|+. .......... ......
T Consensus 230 ~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (399)
T TIGR00893 230 GLGFFLTWFPTYLVQE-----RGLSILEAGFMASLPGIVGFIGMI-LGGRLSDLLLRRGKSLVFARKTAIIAGLVLSLLM 303 (399)
T ss_pred HHHHHHHHHHHHHHHH-----hcccHHHhhHHHHHHHHHHHHHHH-HHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHH
Confidence 7778888888887654 788899999999999999999988 89999999998851 1111111111 111111
Q ss_pred HHHHhhhhhHHHHHHHHHHHHhhhhHHHHhHHHHHHhhcCCcchhhHHhHHHHHHHHHHHHHhhhHHHHHHHHhhhhccc
Q 011783 364 YIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIAMTGMSLFKAAGPAGGGALFSWAQKRLDA 443 (477)
Q Consensus 364 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~ 443 (477)
....... ..+ ....... .+.+..+..+...++..|.+|+++|+++.|+.+....+|..++|.+.|.+.+..
T Consensus 304 ~~~~~~~-~~~-~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~i~g~l~~~~------ 374 (399)
T TIGR00893 304 FATNYVN-IPY-AALALVA-LGFFGLGAGAIGWALISDNAPGNIAGLTGGLINSLGNLGGIVGPIVIGAIAATT------ 374 (399)
T ss_pred HHhccch-hHH-HHHHHHH-HHHhchhhhhHHHHHHHhhcChhHHHHHHHHHHHHHHHhhhhhhHHhhhhccCC------
Confidence 1111001 111 1111122 223333477888899999999999999999999999999999999999999876
Q ss_pred cCCCC-chHHHHHHHHHHHHHHHHHhh
Q 011783 444 SFLPG-SQMVFFVLNVVEAIGVLMTFK 469 (477)
Q Consensus 444 ~~~~g-~~~~~~~~~~~~~~~~~~~~~ 469 (477)
| ++..|.+.+++.+++.+..+.
T Consensus 375 ----g~~~~~~~~~~~~~~~~~~~~~~ 397 (399)
T TIGR00893 375 ----GSFAGALMVVAALALIGALSYLL 397 (399)
T ss_pred ----CchhHHHHHHHHHHHHHHHHHHH
Confidence 6 888888888887777666543
No 11
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=100.00 E-value=6.5e-36 Score=279.61 Aligned_cols=355 Identities=14% Similarity=0.065 Sum_probs=251.9
Q ss_pred hhhchhchHhHHHHHHHHhcccccchhhhhhhHHHHHHHHHHHHHHhhhhhhhhhhcCCchhhHHHHHHHHHHHHHHHhh
Q 011783 53 TALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLS 132 (477)
Q Consensus 53 ~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~Grr~~~~~~~~~~~i~~~~~~~~ 132 (477)
+......+.+.+|.+.+|+|.++.+ .|++.+++.+++.+++++.|+++||+|||+++..+......+.......
T Consensus 3 ~~~~~~~~~~~lp~i~~~~~~s~~~------~g~~~s~~~~g~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~ 76 (368)
T TIGR00903 3 SQAIWVTFSPVLSLVAEDIDVSKEE------LGLLAITYPAAFLALTIPSGLLLDRAFKRWFLFGSLATFAAAAGRLLDP 76 (368)
T ss_pred hhHHHHHHHhhHHHHHHHhCcCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHHHHHh
Confidence 3445567889999999999999999 9999999999999999999999999999998766655555544433334
Q ss_pred hhHHHHHHHHHHhhhcccchhhHHHHhhhhccccchhhHHHHHHHHhHHHHHHHHhHHHHhhhccccCCccccccccccc
Q 011783 133 VNFWMAVLTRFLLGSLNGLLGPIKAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSESLFGK 212 (477)
Q Consensus 133 ~~~~~l~~~r~l~G~~~g~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~ 212 (477)
+|++++++.|+++|++.+...+....++|++|+|+|++++++.+.+..+|.++++++++++.+ .++||..|..
T Consensus 77 ~~~~~l~~~R~l~G~g~~~~~~~~~~~~~~~~~~~r~~a~~~~~~~~~lG~~l~~~~~~~l~~-------~~gWr~~f~~ 149 (368)
T TIGR00903 77 FNYEWLLACQLLAALGQPFLLNAFAPAASQIREERRDLVISLLSFAMYLGIIFALAAGLKIYT-------AGGLQLLIIP 149 (368)
T ss_pred ccHHHHHHHHHHHHhHhHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------ccchHHHHHH
Confidence 799999999999999988765556777999999999999999999999999999999999987 4556655521
Q ss_pred -ccchHHHHHHHHHhhccccccCCCCCCccchhhhhhhhhhccchhhcccCCchhhhhhcchhhHHHHHHHHHHHhhhhh
Q 011783 213 -FPYFLPCLCISLFAFGETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKSLLKNWPLMSSIIVYCVFSLHDMA 291 (477)
Q Consensus 213 -~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 291 (477)
....++..++....+||++++++++ .+. + +....+++++|+|.+|...+.+++.......
T Consensus 150 ~~~l~~~~~~~~~~~lp~~p~~~~~~---~~~---------------~-~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~ 210 (368)
T TIGR00903 150 IAAVAAAGIILVLAALPALPFQAAEG---FGF---------------K-DAVKEFGALAGRKDLWIIGAILGFGVALFDN 210 (368)
T ss_pred HHHHHHHHHHHHHHHcCCCCCCCCCC---cch---------------H-HHHHHHHHHHcChhHHHHHHHHHHHHHHHHH
Confidence 1111222333445667765432110 000 0 0012467899999999999999998888889
Q ss_pred hHHHHHHhhcCcccCCccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcch---hHHH-HHHHHHHHHHHHHHHHHH
Q 011783 292 YSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPI---MVAR-IAGVLTIPLLTSYPYIAM 367 (477)
Q Consensus 292 ~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~---~~~~-~~~~~~~~~~~~~~~~~~ 367 (477)
+..+.|.|+.+ .|++.. .+.......+.+.++ .+++.||.+|+ +... ....+..+.+..+....
T Consensus 211 ~~~wlp~~L~~------~g~s~~-~~~~~~l~~~~g~~g----~~~~~d~~~r~~~r~~~~~~~~~~~a~~~~~~~~~~- 278 (368)
T TIGR00903 211 LAIWLEAALRP------AGLEDI-AGDAVALAILAGLIG----VAVIPDRVARAGLRSIYIRAAALLIAAFFLALAFEL- 278 (368)
T ss_pred HHHHHHHHHHH------CCCChH-HHHHHHHHHHHHHHH----HHHhhHHhhhhhhHHHHHHHHHHHHHHHHHHHHHcc-
Confidence 99999999864 456654 565555555555554 35666665433 3222 22322232222222111
Q ss_pred hhhhhHHHHHHHHHHHHhhhhHHHHhHHHHHHhhcCCcchhhHHhHHHHHHHHHHHHHhhhHHHHHHHHhhhhccccCCC
Q 011783 368 LSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIAMTGMSLFKAAGPAGGGALFSWAQKRLDASFLP 447 (477)
Q Consensus 368 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~ 447 (477)
+ .... .....+.+++.....+..+++.+|.+|++.||++.|+.+..+++++..+|.+.+.+..
T Consensus 279 --~--~~~~-~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~rgt~~G~~~~~g~~~~~~~~~~~~~~~~------------ 341 (368)
T TIGR00903 279 --N--RLAL-FAFIGIAGLLMLPAYAIIMDWIGKFCDKELHGKAAGAIGFTSRAISVALALAAMLFIS------------ 341 (368)
T ss_pred --c--cHHH-HHHHHHHHHhhhhhHHHHHHHHHHhcchhhcCcccchhhHHHHHHHHHHHHHHHHHhc------------
Confidence 1 1111 2222333455566667788899999999999999999999999999999999988872
Q ss_pred CchHHHHHHHHHHHHHHHHHh
Q 011783 448 GSQMVFFVLNVVEAIGVLMTF 468 (477)
Q Consensus 448 g~~~~~~~~~~~~~~~~~~~~ 468 (477)
|.+..|.+.++..+++.+...
T Consensus 342 ~~~~~f~~~~~~~~i~~~~~~ 362 (368)
T TIGR00903 342 SAEAYFTFLAILITIAFAIAL 362 (368)
T ss_pred CHHHHHHHHHHHHHHHHHHHH
Confidence 344677777888777777654
No 12
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=100.00 E-value=2e-35 Score=280.93 Aligned_cols=358 Identities=13% Similarity=0.065 Sum_probs=267.1
Q ss_pred hchHhHHHHHHHHhcccccchhhhhhhHHHHHHHHHHHHHHhhhhhhhhhhcCCchhhHHHHHHHHHHHHHHHhhhhHHH
Q 011783 58 SSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLSVNFWM 137 (477)
Q Consensus 58 ~~~~~~~~~~~~~~~~s~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~ 137 (477)
....+.+|.+.+|+|.|.++ .|++.+.+.+++.+++++.|+++||+|||+++..+..+++++.+.+++++|++.
T Consensus 26 ~~~~~~lp~i~~~~~~s~~~------~g~~~s~~~~~~~l~~~~~g~l~dr~G~r~~l~~~~~l~~~~~~~~~~a~~~~~ 99 (393)
T PRK09705 26 TSVGPLLPQLRQASGMSFSV------AALLTALPVVTMGGLALAGSWLHQHVSERRSVAISLLLIAVGALMRELYPQSAL 99 (393)
T ss_pred hccchhHHHHHHHhCCCHHH------HHHHHHHHHHHHHHHhhhhHHHHHHhCchHHHHHHHHHHHHHHHHHHHCcchHH
Confidence 66789999999999999999 999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhhcccchhhH-HHHhhhhccccchhhHHHHHHHHhHHHHHHHHhHHHHhhhccccCCcccccccccccccch
Q 011783 138 AVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSESLFGKFPYF 216 (477)
Q Consensus 138 l~~~r~l~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 216 (477)
+++.|+++|++.+...+. .+++.|++| ++|+++++.+..+..+|..+|+.+++++.++..+||+.+.+- .
T Consensus 100 ll~~r~l~Gig~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~~g~~~~~~l~~~~~~w~~~~~~~--------~ 170 (393)
T PRK09705 100 LLSSALLGGVGIGIIQAVMPSVIKRRFQ-QRTPLVMGLWSAALMGGGGLGAAITPWLVQHSETWYQTLAWW--------A 170 (393)
T ss_pred HHHHHHHHHhHHHHHhhhhhHHHHHHcc-ccchhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHH--------H
Confidence 999999999999988877 889999997 889999999999999999999999999887533454433221 1
Q ss_pred HHHHHHHHHhhccccccCCCCCCccchhhhhhhhhhccchhhcccCCchhhhhhcchhhHHHHHHHHHHHhhhhhhHHHH
Q 011783 217 LPCLCISLFAFGETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKSLLKNWPLMSSIIVYCVFSLHDMAYSEIF 296 (477)
Q Consensus 217 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (477)
+...+.....++..++.++ +++.+ + ...++.++++..+......++..........+.
T Consensus 171 ~~~~~~~~~~~~~~~~~~~--~~~~~----------------~----~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~l 228 (393)
T PRK09705 171 LPAVVALFAWWWQSAREVA--SSHKT----------------T----TTPVRVVFTPRAWTLGVYFGLINGGYASLIAWL 228 (393)
T ss_pred HHHHHHHHHHHHHhcCCCc--cccCC----------------C----cCCcccccCHhHHHHHHHHHHHHHHHHHHHHHH
Confidence 1111111222222111110 00000 0 112345567777776666666666666777777
Q ss_pred HHhhcCcccCCccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHHHhhhhhHHHH
Q 011783 297 SLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTIPLLTSYPYIAMLSGFGLAFL 376 (477)
Q Consensus 297 ~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 376 (477)
|.|+.+ +|+++.+.+...+..+++.++++. +.+++.||.++|+....+..+..++...+...... . ....
T Consensus 229 p~~l~~------~g~s~~~ag~~~~~~~i~~i~g~~-~~g~l~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~--~-~~~~ 298 (393)
T PRK09705 229 PAFYIE------IGASAQYSGSLLALMTLGQAAGAL-LMPAMARHQDRRKLLMLALVLQLVGFCGFIWLPLQ--L-PVLW 298 (393)
T ss_pred HHHHHH------cCCChhhhhHHHHHHHHHHHHHHH-HHHHHHhhccchHHHHHHHHHHHHHHHHHHHccch--H-HHHH
Confidence 777653 688999999999999999999998 88999999999998888877766665544332221 1 1111
Q ss_pred HHHHHHHHhhhhHHHHhHHHHHHhhcC-CcchhhHHhHHHHHHHHHHHHHhhhHHHHHHHHhhhhccccCCCCchHHHHH
Q 011783 377 LNCASVVKNLLSVSIITGLFILQNRAV-DQDQRGAANGIAMTGMSLFKAAGPAGGGALFSWAQKRLDASFLPGSQMVFFV 455 (477)
Q Consensus 377 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~g~~~~~~~ 455 (477)
. .+.+++.+...+.......+.. |++++++++|+.+...+++..++|.+.|++.|+.+ ++...|.+
T Consensus 299 ~----~l~g~g~g~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~gp~~~G~l~~~~g---------~~~~~~~~ 365 (393)
T PRK09705 299 A----MVCGLGLGGAFPLCLLLALDHSVQPAIAGKLVAFMQGIGFIIAGLAPWFSGVLRSISG---------NYLMDWAF 365 (393)
T ss_pred H----HHHHHhccchHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC---------CchHHHHH
Confidence 1 1123344455555555555555 46789999999999999999999999999999872 36778888
Q ss_pred HHHHHHHHHHHHhhhhhhccC
Q 011783 456 LNVVEAIGVLMTFKPFLAQRH 476 (477)
Q Consensus 456 ~~~~~~~~~~~~~~~~~~~~~ 476 (477)
.++++++..++... ..||++
T Consensus 366 ~~~~~~~~~~~~~~-~~~~~~ 385 (393)
T PRK09705 366 HALCVVGLMIITLR-FAPARF 385 (393)
T ss_pred HHHHHHHHHHHHHH-hccccc
Confidence 87777777666544 456554
No 13
>PRK12307 putative sialic acid transporter; Provisional
Probab=100.00 E-value=1.9e-35 Score=285.57 Aligned_cols=362 Identities=15% Similarity=0.179 Sum_probs=262.2
Q ss_pred CchhHHHHHHHHHHHhhhchhchHhHHHHHHHHhcccccchhhhhhhHHHHHHHHHHHHHHhhhhhhhhhhcCCchhhHH
Q 011783 38 LPITELFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIM 117 (477)
Q Consensus 38 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~Grr~~~~~ 117 (477)
.+++.+...++..+.+.++.....+.+|.+.+++|.++.+ .+++.+++.+++.+++++.|+++||+|||+++.+
T Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~------~~~~~~~~~~~~~l~~~~~g~l~dr~g~r~~l~~ 88 (426)
T PRK12307 15 PQKNALFSAWLGYVFDGFDFMLIFYIMYLIKADLGLTDME------GAFLATAAFIGRPFGGALFGLLADKFGRKPLMMW 88 (426)
T ss_pred HHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHH
Confidence 4456677888888899999999999999999999999999 9999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhhhhHHHHHHHHHHhhhcccchhhH-HHHhhhhccccchhhHHHHHHHHhHHHHHHHHhHHHHhhhc
Q 011783 118 GTASVVIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQP 196 (477)
Q Consensus 118 ~~~~~~i~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~ 196 (477)
+.++.+++.++++++++++.+++.|+++|++.+...+. ..++.|++|+|+|+++.++...+..+|.++++.+.+.+.+
T Consensus 89 ~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~g~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg~~~~~~l~~~l~~- 167 (426)
T PRK12307 89 SIVAYSVGTGLSGLASGVIMLTLSRFIVGMGMAGEYACASTYAVESWPKHLKSKASAFLVSGFGIGNIIAAYFMPSFAE- 167 (426)
T ss_pred HHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhCCHhHhhHhhhHHHHHHhHHHHHHHHHHHHHcc-
Confidence 99999999999999999999999999999998887777 9999999999999999999999999999999999888876
Q ss_pred cccCCcccccccccccccchHHHHHHHHHhh----ccccccCCCCCCccchhhhhhhhhhccchhhcccCCchhhhhhcc
Q 011783 197 AEKYPNLFSSESLFGKFPYFLPCLCISLFAF----GETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKSLLKN 272 (477)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 272 (477)
.++|+..+.. .....+..+.+ ||++++.+++. +++.++.++.........++++++
T Consensus 168 ------~~~w~~~f~i----~~~~~~~~~~~~~~~p~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~ 227 (426)
T PRK12307 168 ------AYGWRAAFFV----GLLPVLLVIYIRARAPESKEWEEAKL----------SGKGKHSQSAWSVFSLSMKGLFNR 227 (426)
T ss_pred ------cCCHHHHHHH----HHHHHHHHHHHHHHCCCChHHHHhhh----------hccccccccchhhhhHHHHHHHhh
Confidence 4556655511 11111111222 22211100000 000000000001112246678888
Q ss_pred hhhHHHHHHHHHHH---hhhhhhHHHHHHhhcCcccCCccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHH
Q 011783 273 WPLMSSIIVYCVFS---LHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVAR 349 (477)
Q Consensus 273 ~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 349 (477)
+.++.......... ........+.|.|..+ .|+++.+.+...+...++.+++++ +.+++.||++||+...
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~g~~~~~~~~~~~~~~~~~~~g~~-~~g~l~dr~~~~~~~~ 300 (426)
T PRK12307 228 AQFPLTLCVFIVLFSIFGANWPIFGLLPTYLAG------EGFDTGVVSNLMTAAAFGTVLGNI-VWGLCADRIGLKKTFS 300 (426)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH------cCCCHHHHHHHHHHHHHHHHHHHH-HHHHHHHHhccHHHHH
Confidence 87765443332222 2222345566766653 588888999999999999999988 8999999999999888
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhhhhHHHHhHHHHHHhhcCCcchhhHHhHHHHHHHHHHHHHhhhH
Q 011783 350 IAGVLTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIAMTGMSLFKAAGPAG 429 (477)
Q Consensus 350 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~ 429 (477)
.+.++..+..+.+..... ......... .+..++...+..+....++.|.+|++.||+++|+.+....+++.++|.+
T Consensus 301 ~~~~~~~~~~~~~~~~~~--~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~~~~~gp~~ 376 (426)
T PRK12307 301 IGLLMSFLFIFPLFRIPQ--DNYLLLGAC--LFGLMATNVGVGGLVPKFLYDYFPLEVRGLGTGLIYNLAATSGTFNSMA 376 (426)
T ss_pred HHHHHHHHHHHHHHHHcc--ccHHHHHHH--HHHHHHhcccHhHHHHHHHHHhCcHHHHhhhhhHHHHHHhHHHHHHHHH
Confidence 887766555443332221 111111111 1111122222334455677899999999999999999999999999999
Q ss_pred HHHHHHHh
Q 011783 430 GGALFSWA 437 (477)
Q Consensus 430 ~g~l~~~~ 437 (477)
.|++.+..
T Consensus 377 ~g~l~~~~ 384 (426)
T PRK12307 377 ATWLGITM 384 (426)
T ss_pred HHHHHHcc
Confidence 99999887
No 14
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=100.00 E-value=7.7e-35 Score=280.70 Aligned_cols=386 Identities=13% Similarity=0.074 Sum_probs=251.0
Q ss_pred hhHHHHHHHHHHHhhhchhchHhHHHHHHHHhcc---cccchhhhhhhHHHHHHHHHHHHHHhhhhhhhhhhcCCchhhH
Q 011783 40 ITELFSIWIIVLCTALPISSLFPFLYFMIKDFQI---AKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVII 116 (477)
Q Consensus 40 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---s~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~Grr~~~~ 116 (477)
++.+...+++.+++.+|...+....|.+.+|++. +..+ ....+.+.+...++..++++++|+++||+|||+++.
T Consensus 21 ~~~~~~~~~~~~~~~~d~~~~~~~~~~l~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~ig~~~~G~l~Dr~Grr~~l~ 97 (432)
T PRK10406 21 IWAIVGASSGNLVEWFDFYVYSFCSLYFAHIFFPSGNTTTQ---LLQTAGVFAAGFLMRPIGGWLFGRIADKHGRKKSML 97 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCchHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHH
Confidence 3445566778899999999999999999999863 3332 001333445555666699999999999999999999
Q ss_pred HHHHHHHHHHHHHHhhhhHH--------HHHHHHHHhhhcccchhhH-HHHhhhhccccchhhHHHHHHHHhHHHHHHHH
Q 011783 117 MGTASVVIFNTLFGLSVNFW--------MAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGP 187 (477)
Q Consensus 117 ~~~~~~~i~~~~~~~~~~~~--------~l~~~r~l~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~ 187 (477)
.+.++++++++++++++++. ++++.|+++|++.|...|. .++++|++|+++|+++.++.+.+...|..+++
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~g~g~~~~~~~~~i~e~~p~~~rg~~~~~~~~~~~~G~~~~~ 177 (432)
T PRK10406 98 ISVCMMCFGSLVIACLPGYETIGTWAPALLLLARLFQGLSVGGEYGTSATYMSEVAVEGRKGFYASFQYVTLIGGQLLAL 177 (432)
T ss_pred HHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHHHHHHhhhhhhHhhHHHHHHHhCCCCcccHHHHHHHHHHHHHHHHHH
Confidence 99999999999999988764 6899999999999998887 99999999999999999999988889988888
Q ss_pred hHHHHhhhccccC-CcccccccccccccchHHHHHHHHHhhccccccCCCCCCccchhhhhhhhhhccchhhcccCCchh
Q 011783 188 ALGGFLAQPAEKY-PNLFSSESLFGKFPYFLPCLCISLFAFGETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPK 266 (477)
Q Consensus 188 ~~~~~l~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (477)
.+...+.....+- -..++||..|.......+........+||+++. +.+ +.++..+.
T Consensus 178 ~~~~~~~~~~~~~~~~~~gWr~~F~i~~~~~ll~~~~~~~~~e~~~~------~~~----------------~~~~~~~~ 235 (432)
T PRK10406 178 LVVVVLQQTLEDAELREWGWRIPFALGAVLAVVALWLRRQLDETSQQ------ETR----------------ALKEAGSL 235 (432)
T ss_pred HHHHHHHHhCCHHHHhccchHHHHHHHHHHHHHHHHHHhcCCCCchH------HHh----------------hhcccccH
Confidence 7766554311000 002466665510000011111111112222110 000 00112246
Q ss_pred hhhhcchhhHHHHHHHHHH-HhhhhhhHHHHHHhhcCcccCCccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcch
Q 011783 267 KSLLKNWPLMSSIIVYCVF-SLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPI 345 (477)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 345 (477)
++++|+++.+...+...+. ......+..+.|.|+.+. +|++..+.+.......+...+++. +.+++.||++||
T Consensus 236 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~l~~~-----~g~s~~~~~~~~~i~~~~~~i~~~-~~G~l~Dr~grr 309 (432)
T PRK10406 236 KGLWRNRRAFIMVLGFTAAGSLCFYTFTTYMQKYLVNT-----AGMHANVASGIMTAALFVFMLIQP-LIGALSDKIGRR 309 (432)
T ss_pred HHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-----cCCCHHHHHHHHHHHHHHHHHHHH-HHHHHHHHcCch
Confidence 6788888877655544432 444556667778777543 688888888888888888888887 779999999999
Q ss_pred hHHHHHHHHHHHHHHHHHH-HHHhhhhhHHHHHHHHHHHHhhhhHHHHhHHHHHHhhcCCcchhhHHhHHHHHHHHH-HH
Q 011783 346 MVARIAGVLTIPLLTSYPY-IAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIAMTGMSL-FK 423 (477)
Q Consensus 346 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~-g~ 423 (477)
+....+..+..+....+.. ....... ...+. ...+..+..+...+....+.+|.+|++.|+++.|+.+...+. .+
T Consensus 310 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~-~~~~~~~~~~~~~~~~~~~~~e~fp~~~r~t~~g~~~~~g~~~~g 386 (432)
T PRK10406 310 TSMLCFGSLAALFTVPILSALQNVSSP--YAAFG-LVMCALLIVSFYTSISGILKAEMFPAQVRALGVGLSYAVANALFG 386 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCcH--HHHHH-HHHHHHHHHHHHHHHHHHHHHHHCCCCccchhhhHHHHHHHHHHH
Confidence 8877665543333221111 1111111 11111 111111222233345667889999999999999999987664 34
Q ss_pred HHhhhHHHHHHHHhhhhccccCCCCchHHHHHHHHHHHHHHHHHhh
Q 011783 424 AAGPAGGGALFSWAQKRLDASFLPGSQMVFFVLNVVEAIGVLMTFK 469 (477)
Q Consensus 424 ~~~~~~~g~l~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 469 (477)
...|.+.+.+ +..+ .+...+++.+++.+++.+..++
T Consensus 387 ~~~p~~~~~l-~~~g---------~~~~~~~~~~~~~~i~~~~~~~ 422 (432)
T PRK10406 387 GSAEYVALSL-KSIG---------METAFFWYVTLMAVVAFLVSLM 422 (432)
T ss_pred hHHHHHHHHH-HHhC---------CCcHHHHHHHHHHHHHHHHHHH
Confidence 4577777744 5441 2555666666666666665554
No 15
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=100.00 E-value=3.9e-35 Score=281.83 Aligned_cols=379 Identities=15% Similarity=0.133 Sum_probs=262.7
Q ss_pred CCCchhHHHHHHHHHHHhhhchhchHhHHHHHHHHhcccccchhhhhhhHHHHHHHHHHHHHHhhhhhhhhhhcCCchhh
Q 011783 36 SGLPITELFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVI 115 (477)
Q Consensus 36 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~Grr~~~ 115 (477)
++.+|+.+..++++.+.+.++.....+..|.+.+++|.++.+ .|++.+++.++..+++++.|+++||+|||+++
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~s~~~------~g~~~~~~~~~~~~~~~~~G~l~Dr~g~r~~~ 80 (405)
T TIGR00891 7 TRAQWNAFSAAWLGWLLDAFDFFLVALVLAEVAGEFGLTTVD------AASLISAALISRWFGALMFGLWGDRYGRRLPM 80 (405)
T ss_pred CcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhh------HHHHHHHHHHHHHHHHHHHHHHHHHhccHHHH
Confidence 345667788899999999999999999999999999999999 99999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhhhhHHHHHHHHHHhhhcccchhhH-HHHhhhhccccchhhHHHHHHHHhHHHHHHHHhHHHHhh
Q 011783 116 IMGTASVVIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLA 194 (477)
Q Consensus 116 ~~~~~~~~i~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~ 194 (477)
..+.++.+++.++++++++++.+++.|++.|++.+...+. .+++.|++|+++|++++++.+.+..+|..+++.+++.+.
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~l~ 160 (405)
T TIGR00891 81 VTSIVLFSAGTLACGFAPGYITMFIARLVIGIGMGGEYGSSAAYVIESWPKHLRNKASGLLISGYAVGAVVAAQVYSLVV 160 (405)
T ss_pred HHHHHHHHHHHHHHHHhccHHHHHHHHHHHHhhhhhhhHHHHHHHHHhCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999888887 999999999999999999999999999999999999988
Q ss_pred hccccCCcccccccccccccchHHHHHHHHHhhccccccCCCCCCccchhhhhhhhhhccchhhcc---cCCchhhhhhc
Q 011783 195 QPAEKYPNLFSSESLFGKFPYFLPCLCISLFAFGETLHRHNDDDDSCDVSYDALESASAEVKEEEG---REATPKKSLLK 271 (477)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~ 271 (477)
+... .+|+..+................+||+++++++++++.+ ..+..++...+....+. +.....++..+
T Consensus 161 ~~~~-----~~w~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (405)
T TIGR00891 161 PVWG-----DGWRALFFISILPIIFALWLRKNIPEAEDWKEKHAGKAL-VRTMVDILYGGEHRIANIVMTLAAAMVQSAG 234 (405)
T ss_pred HhcC-----ccHHHHHHHHHHHHHHHHHHHHhCCCChhHHHHhhhhhh-hhhHHHHHhccchhhhhhhhhhhHHhhhhhh
Confidence 7321 124444411111111122222334554332111111000 00000000000000000 00001111111
Q ss_pred -chh-hHHHHHHHHHHHhhhhhhHHHHHHhhcCcccCCccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHH
Q 011783 272 -NWP-LMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVAR 349 (477)
Q Consensus 272 -~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 349 (477)
++. +........+..........++|.|..+. +|++..+.+.+.....++.+++.+ +.+++.||+++|+.+.
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~g~s~~~~~~~~~~~~~~~~~g~~-~~g~l~dr~g~~~~~~ 308 (405)
T TIGR00891 235 KRWPTFVYLVVLVLFANLYSHPIQDLLPTYLKAD-----LGLSPHTVANIVVFSNIGAIVGGC-VFGFLGDWLGRRKAYV 308 (405)
T ss_pred hhhHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHH-----hCCCHHHHHHHHHHHHHHHHHHHH-HHHHHHHHhCchhhhH
Confidence 111 12222222222333334445566665533 789999999999999999999988 8999999999999888
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhhhhHHHHhHHHHHHhhcCCcchhhHHhHHHHHHHHHHHHHhhhH
Q 011783 350 IAGVLTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIAMTGMSLFKAAGPAG 429 (477)
Q Consensus 350 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~ 429 (477)
.+..+..+........ . .. .+ .......+.+++.....+....++.|.+|+++|++++|+.+...++|..++|.+
T Consensus 309 ~~~~~~~~~~~~~~~~-~-~~--~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~g~~~ 383 (405)
T TIGR00891 309 CSLLAGQLLIIPVFAI-G-AN--VA-VLGLGLFFQQMLVQGIWGILPKHLGEYFPTDQRAAGLGFTYQLGNLGGALAPII 383 (405)
T ss_pred HHHHHHHHHHHHHHHh-C-Cc--hH-HHHHHHHHHHHHHccchhhHHHHHhhhCCcchhHHHhhHHHHHHHHHHHHHHHH
Confidence 7766543332222111 1 11 11 122222223344455566677788999999999999999999999999999999
Q ss_pred HHHHHHHh
Q 011783 430 GGALFSWA 437 (477)
Q Consensus 430 ~g~l~~~~ 437 (477)
.|.+.|+.
T Consensus 384 ~g~l~~~~ 391 (405)
T TIGR00891 384 GALLAQRL 391 (405)
T ss_pred HHHHHHhc
Confidence 99999987
No 16
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=100.00 E-value=3.6e-34 Score=272.05 Aligned_cols=366 Identities=17% Similarity=0.169 Sum_probs=265.6
Q ss_pred chhHHHHHHHHHHHhhhchhchHhHHHHHHHHhcccccchhhhhhhHHHHHHHHHHHHHHhhhhhhhhhhcCCchhhHHH
Q 011783 39 PITELFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMG 118 (477)
Q Consensus 39 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~Grr~~~~~~ 118 (477)
.|+.+..+....+..........+.+|.+.+|+|.++++ .|+..+++.++..+++++.|+++||+|||+++..+
T Consensus 18 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~s~~~------~g~~~~~~~~~~~~~~~~~g~l~Dr~grr~~~~~~ 91 (394)
T PRK10213 18 NWSAVFSVAFCVACLIIVEFLPVSLLTPMAQDLGISEGV------AGQSVTVTAFVAMFASLFITQTIQATDRRYVVILF 91 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHcCCCHHH------HHHHHHHHHHHHHHHHHHHHHHhcccCcHHHHHHH
Confidence 455555555555555556567777889999999999999 99999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhhhHHHHHHHHHHhhhcccchhhH-HHHhhhhccccchhhHHHHHHHHhHHHHHHHHhHHHHhhhcc
Q 011783 119 TASVVIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPA 197 (477)
Q Consensus 119 ~~~~~i~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~ 197 (477)
.++.+++.+++++++|++++++.|+++|++.+...+. .+++.|++|+|+|++++++...+.++|..+||++++.+.+
T Consensus 92 ~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~~~l~~-- 169 (394)
T PRK10213 92 AVLLTLSCLLVSFANSFSLLLIGRACLGLALGGFWAMSASLTMRLVPPRTVPKALSVIFGAVSIALVIAAPLGSFLGE-- 169 (394)
T ss_pred HHHHHHHHHHHHHHChHHHHHHHHHHHHHhhHHHHHHHHHHHHHHcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHh--
Confidence 9999999999999999999999999999999988887 9999999999999999999999999999999999999988
Q ss_pred ccCCcccccccccccccchHHHHH-HHHHhhccccccCCCCCCccchhhhhhhhhhccchhhcccCCchhhhhhcchhhH
Q 011783 198 EKYPNLFSSESLFGKFPYFLPCLC-ISLFAFGETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKSLLKNWPLM 276 (477)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 276 (477)
.++||..|........... ......||.++ +++ +.....++.+|+|.++
T Consensus 170 -----~~gw~~~f~~~~~l~~~~~l~~~~~~p~~~~-----~~~--------------------~~~~~~~~~l~~~~~~ 219 (394)
T PRK10213 170 -----LIGWRNVFNAAAVMGVLCIFWIIKSLPSLPG-----EPS--------------------HQKQNTFRLLQRPGVM 219 (394)
T ss_pred -----hcCHHHHHHHHHHHHHHHHHHHHHHCCCCCc-----ccc--------------------cchhHHHHHhcCHHHH
Confidence 4566655521111111111 11112233210 000 0011345678888888
Q ss_pred HHHHHHHHHHhhhhhhHHHH-HHhhcCcccCCccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHH
Q 011783 277 SSIIVYCVFSLHDMAYSEIF-SLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLT 355 (477)
Q Consensus 277 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 355 (477)
...+..++..........+. |.|..+ +|+++.+.+......+++.+++.. +.+++.||.+ ++.+..+..+.
T Consensus 220 ~~~~~~~~~~~~~~~~~~~~~p~~~~~------~g~s~~~~g~~~~~~~~~~iig~~-~~~~l~~r~~-~~~l~~~~~~~ 291 (394)
T PRK10213 220 AGMIAIFMSFAGQFAFFTYIRPVYMNL------AGFGVDGLTLVLLSFGIASFVGTS-LSSFILKRSV-KLALAGAPLVL 291 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHh------cCCChhHHHHHHHHHHHHHHHHHH-HHHHHHhccc-hhHHHHHHHHH
Confidence 77665555544444444444 444432 789999999999999999999987 8899999854 44433333332
Q ss_pred HHH-HHHHHHHHHhhhhhHHHHHHHHHHHHhhhhHHHHhHHHHHHhhcCCcchhhHHhHHHHHHHHHHHHHhhhHHHHHH
Q 011783 356 IPL-LTSYPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIAMTGMSLFKAAGPAGGGALF 434 (477)
Q Consensus 356 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~ 434 (477)
.+. +.+...... .+ .+....++.+++.....+...+.+++..| ++++++.+......++|..+||.++|.++
T Consensus 292 ~~~~~~l~~~~~~-----~~-~~~~~~~l~G~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~lg~~~G~~l~G~l~ 364 (394)
T PRK10213 292 AVSALVLTLWGSD-----KI-VATGVAIIWGLTFALVPVGWSTWITRSLA-DQAEKAGSIQVAVIQLANTCGAAIGGYAL 364 (394)
T ss_pred HHHHHHHHHHhhh-----HH-HHHHHHHHHHHHHHhhhHHHHHHHHHHCc-ccHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 322 232222211 12 22233444556667777777778888787 55778888888888999999999999999
Q ss_pred HHhhhhccccCCCCchHHHHHHHHHHHHHHHHH
Q 011783 435 SWAQKRLDASFLPGSQMVFFVLNVVEAIGVLMT 467 (477)
Q Consensus 435 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 467 (477)
|.. |+...+...+++.++..+..
T Consensus 365 ~~~----------g~~~~~~~~~~~~~~~~~~~ 387 (394)
T PRK10213 365 DNI----------GLTSPLMLSGTLMLLTALLV 387 (394)
T ss_pred hcc----------ChhhHHHHHHHHHHHHHHHH
Confidence 987 77778888776655554433
No 17
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=100.00 E-value=1.9e-34 Score=281.98 Aligned_cols=404 Identities=14% Similarity=0.070 Sum_probs=260.6
Q ss_pred hhHHHHHHHHHHHhhhchhchHhHHHHHHHHhcccccchhhhhhhHH-HHHHHHHHHHHHhhhhhhhhhhcCCchhhHHH
Q 011783 40 ITELFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGY-VGSSFMFGRALTSVFWGLVADRYGRKPVIIMG 118 (477)
Q Consensus 40 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~g~-~~s~~~~~~~~~~~~~G~l~Dr~Grr~~~~~~ 118 (477)
++.+....++.+++.+|..++....|.+.++++.+.++.. +....+ +.++..+++.+++++.|+++||+|||+++.++
T Consensus 15 ~~~~~~~~~g~~~~~~d~~~~~~~~~~i~~~~~~~~~~~~-~~~~~~~~~~~~~l~~~ig~~~~G~l~Dr~Grr~~l~~~ 93 (490)
T PRK10642 15 RKAITAASLGNAMEWFDFGVYGFVAYALGKVFFPGADPSV-QMIAALATFSVPFLIRPLGGLFFGMLGDKYGRQKILAIT 93 (490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCcHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHH
Confidence 3456677889999999999999999999999976554310 110111 25788899999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhhhHHH--------HHHHHHHhhhcccchhhH-HHHhhhhccccchhhHHHHHHHHhHHHHHHHHhH
Q 011783 119 TASVVIFNTLFGLSVNFWM--------AVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPAL 189 (477)
Q Consensus 119 ~~~~~i~~~~~~~~~~~~~--------l~~~r~l~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~ 189 (477)
.++++++++++++++|+++ +++.|+++|++.|...+. .++++|++|+++|++..++...+..+|..+|+.+
T Consensus 94 ~~l~~i~~~~~a~~~~~~~~g~~a~~~l~~~R~l~G~g~g~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~G~~lg~~~ 173 (490)
T PRK10642 94 IVIMSISTFCIGLIPSYATIGIWAPILLLLCKMAQGFSVGGEYTGASIFVAEYSPDRKRGFMGSWLDFGSIAGFVLGAGV 173 (490)
T ss_pred HHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHhHhHhhHHHHHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999875 899999999999988887 9999999999999999999998888898888877
Q ss_pred HHHhhhccccC-CcccccccccccccchHHHHHHHHHhhccccccCCCCCCccchhhhhhhhhhccchhhcccCCchhhh
Q 011783 190 GGFLAQPAEKY-PNLFSSESLFGKFPYFLPCLCISLFAFGETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKS 268 (477)
Q Consensus 190 ~~~l~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (477)
...+.....+. -..++||..|.......+..+.....+||++++.+.+++..+ ...+.. +++.+.+.++
T Consensus 174 ~~~~~~~~~~~~~~~~gWR~~f~i~~~~~l~~~~~~~~~~esp~~~~~~~~~~~--------~~~~~~--~~~~~~~~~~ 243 (490)
T PRK10642 174 VVLISTIVGEANFLDWGWRIPFFIALPLGIIGLYLRHALEETPAFQQHVDKLEQ--------GDREGL--QDGPKVSFKE 243 (490)
T ss_pred HHHHHHhcCHHHhcCccHHHHHHHHHHHHHHHHHHHHcCCCChhHHHHHHhhhh--------hccccc--cccccCCHHH
Confidence 66554311000 002466666521111111122222345666543211100000 000000 0111223455
Q ss_pred hhcc-hhhHH-HHHHHHHHHhhhhhhHHHHHHhhcCcccCCccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcchh
Q 011783 269 LLKN-WPLMS-SIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIM 346 (477)
Q Consensus 269 ~~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 346 (477)
++++ +..+. .....++.....+....+.|.|+... +|++..+.+.......++..++.+ +.+++.||+|||+
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~-----~g~s~~~~~~~~~~~~~~~~~~~~-~~g~l~dr~grr~ 317 (490)
T PRK10642 244 IATKHWRSLLTCIGLVIATNVTYYMLLTYMPSYLSHN-----LHYSEDHGVLIIIAIMIGMLFVQP-VMGLLSDRFGRRP 317 (490)
T ss_pred HHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-----cCCCHHHHHHHHHHHHHHHHHHHH-HHHHHHHHhccHH
Confidence 5543 22222 22222333344555666777777543 678887777777777788888877 8899999999999
Q ss_pred HHHHHHHHHHHHHHH-HHHHHHhhhhhHHHHHHHHHHHHhhhhHHHHhHHHHHHhhcCCcchhhHHhHHHHHHHHHHHHH
Q 011783 347 VARIAGVLTIPLLTS-YPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIAMTGMSLFKAA 425 (477)
Q Consensus 347 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~ 425 (477)
.+..+.+...+.... +..... .. .. .+....++.+++.+........+..+.+|++.|+++.|+.+....+++.+
T Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~-~~--~~-~~~~~~~~~g~~~~~~~g~~~~~~~~~~p~~~Rg~~~g~~~~~~~~~g~~ 393 (490)
T PRK10642 318 FVILGSVALFVLAIPAFILINS-NV--IG-LIFAGLLMLAVILNCFTGVMASTLPAMFPTHIRYSALAAAFNISVLVAGL 393 (490)
T ss_pred HHHHHHHHHHHHHHHHHHHHhC-CC--HH-HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCccchHHHHHHHHHHHHHHHH
Confidence 887776543332222 211111 11 11 12222222233334444555667778999999999999877777778889
Q ss_pred hhhHHHHHHHHhhhhccccCCCCchHHHHHHHHHHHHHHHHHhhhhhhcc
Q 011783 426 GPAGGGALFSWAQKRLDASFLPGSQMVFFVLNVVEAIGVLMTFKPFLAQR 475 (477)
Q Consensus 426 ~~~~~g~l~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 475 (477)
+|.+.|++.+... ++...+++..+.++++.+..++ .||+
T Consensus 394 ~p~i~g~l~~~~~---------~~~~~~~~~~~~~~i~~~~~~~--~pes 432 (490)
T PRK10642 394 TPTLAAWLVESTQ---------NLMMPAYYLMVVAVIGLITGVT--MKET 432 (490)
T ss_pred HHHHHHHHHHHhC---------CchHHHHHHHHHHHHHHHHHHH--hccc
Confidence 9999999987651 2444555555555555555444 4554
No 18
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=100.00 E-value=2.5e-34 Score=275.09 Aligned_cols=365 Identities=18% Similarity=0.152 Sum_probs=265.4
Q ss_pred chhHHHHHHHHHHHhhhchhchHhHHHH-HHHHhcccccchhhhhhhHHHHHHHHHHHHHHhhhhhhhhhhcCCchhhHH
Q 011783 39 PITELFSIWIIVLCTALPISSLFPFLYF-MIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIM 117 (477)
Q Consensus 39 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~s~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~Grr~~~~~ 117 (477)
.++.+..+.+..++..++.++..+.+|. +.+++|.++.+ .|++.+++.+++.+++++.|+++||+|||+++..
T Consensus 13 ~~~~~~~l~~~~~~~~~~~~~~~~~l~~~i~~~~g~s~~~------~g~~~~~~~~~~~i~~~~~G~l~Dr~g~r~~l~~ 86 (399)
T PRK05122 13 LTLRIVSIVMFTFISYLTIGLPLAVLPGYVHDQLGFSAFL------AGLVISLQYLATLLSRPHAGRYADTLGPKKAVVF 86 (399)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccHHH------HHHHHHHHHHHHHHhchhhHhHHhccCCcchHHH
Confidence 3467888999999999999999999996 67889999999 9999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhh--------hhHHHHHHHHHHhhhcccchhhH-HHHhhhhccccchhhHHHHHHHHhHHHHHHHHh
Q 011783 118 GTASVVIFNTLFGLS--------VNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPA 188 (477)
Q Consensus 118 ~~~~~~i~~~~~~~~--------~~~~~l~~~r~l~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~ 188 (477)
+.++.+++.+.+.++ .+++.+++.|+++|++.+...+. .+++.|++|+|+|++++++.+.+..+|.++||.
T Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~ 166 (399)
T PRK05122 87 GLCGCALSGLLYLLAGLLAAWPVLSLLLLLLGRLLLGIGESLAGTGSILWGIGRVGALHTGRVISWNGIATYGALAIGAP 166 (399)
T ss_pred HHHHHHHHHHHHHHhhhhhccchhHHHHHHHHHHHHHhhHHhhcchHHHHHHhhcChhhhccchhhhhhhhhHHHHHHHH
Confidence 999988877766543 25778999999999999998887 889999999999999999999999999999999
Q ss_pred HHHHhhhccccCCcccccccccccccchHHHHHHHHHhhccccccCCCCCCccchhhhhhhhhhccchhhcccCCchhhh
Q 011783 189 LGGFLAQPAEKYPNLFSSESLFGKFPYFLPCLCISLFAFGETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKS 268 (477)
Q Consensus 189 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (477)
+++.+.+ .++|+..+. . .....++..+...+.++.++ ++.+ + .+.++
T Consensus 167 l~~~l~~-------~~g~~~~~~-~--~~~~~~~~~~~~~~~~~~~~---~~~~----------------~----~~~~~ 213 (399)
T PRK05122 167 LGVLLYH-------WGGLAGLGL-L--IMLLALLGLLLARPRPAVPP---VKGE----------------R----LPFRR 213 (399)
T ss_pred HHHHHHH-------cccHHHHHH-H--HHHHHHHHHHHHhcCCCCCC---CCcc----------------c----hhHHH
Confidence 9999987 455655541 0 11111111222221111100 0000 0 01222
Q ss_pred hhcchhhHHHHHHHHHHHhhhhhhHHHHHHhhcCcccCCccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHH
Q 011783 269 LLKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVA 348 (477)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 348 (477)
.+++ .+.......+..........+.+.|..+ .|+ .+.+.......++.+++.+ ..+++.||+++|+.+
T Consensus 214 ~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~--~~~~~~~~~~~~~~~~~~~-~~g~l~~r~~~~~~~ 282 (399)
T PRK05122 214 VLGR--VWPYGMGLALASIGFGTIATFITLYYAA------RGW--DGAALALTLFGVAFVGARL-LFGNLINRLGGLRVA 282 (399)
T ss_pred HHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHH------ccc--ccchHHHHHHHHHHHHHHH-HHHHHHHHhccHHHH
Confidence 2221 1211222222233333444555655543 344 2345666777788888877 889999999999988
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhhhhHHHHhHHHHHHhhcCCcchhhHHhHHHHHHHHHHHHHhhh
Q 011783 349 RIAGVLTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIAMTGMSLFKAAGPA 428 (477)
Q Consensus 349 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~ 428 (477)
..+..+..++...+....+ . + ......++.+++.+...+.......+..|+++||++.|+.+....+|..++|.
T Consensus 283 ~~~~~~~~~~~~~~~~~~~---~--~-~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~ 356 (399)
T PRK05122 283 IVSLLVEILGLLLLWLAPS---P--W-MALIGAALTGFGFSLVFPALGVEAVKRVPPQNRGAALGAYSVFLDLSLGITGP 356 (399)
T ss_pred HHHHHHHHHHHHHHHHhcc---H--H-HHHHHHHHHHHhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8887777766655544322 1 1 22333444556666677777777778899999999999999999999999999
Q ss_pred HHHHHHHHhhhhccccCCCCchHHHHHHHHHHHHHHHHHhh
Q 011783 429 GGGALFSWAQKRLDASFLPGSQMVFFVLNVVEAIGVLMTFK 469 (477)
Q Consensus 429 ~~g~l~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 469 (477)
+.|.+.++. |++..|++.+++.+++.++...
T Consensus 357 ~~g~l~~~~----------g~~~~~~~~~~~~~~~~~~~~~ 387 (399)
T PRK05122 357 LAGLVASWF----------GYPSIFLAAALAALLGLALTWL 387 (399)
T ss_pred HHHHHHHHc----------CHHHHHHHHHHHHHHHHHHHHH
Confidence 999999887 8889999988888888776665
No 19
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=100.00 E-value=7.9e-35 Score=282.11 Aligned_cols=396 Identities=11% Similarity=0.040 Sum_probs=262.0
Q ss_pred HHHHHHHHHhhhchhchHhHHHHHHHHhcccccchhhhhhhHHHHHHHHHHHHHHhhhhhhhhhhcCCchhhHHHHHHHH
Q 011783 44 FSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVV 123 (477)
Q Consensus 44 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~Grr~~~~~~~~~~~ 123 (477)
....+......++...+...+|.+.++ |.+..+ .|++.+++.+++.+++++.|+++||+|||++++++.++.+
T Consensus 32 ~~~~~~~~~~~~~~~~~~~~~p~l~~~-g~s~~~------~g~~~~~~~i~~~~~~~~~G~l~Dr~g~k~~l~~~~~~~~ 104 (452)
T PRK11273 32 LGIFFGYAAYYLVRKNFALAMPYLVEQ-GFSRGD------LGFALSGISIAYGFSKFIMGSVSDRSNPRVFLPAGLILAA 104 (452)
T ss_pred HHHHHHHHHHHHHHHHHHHhhHHHHHc-CCCHHH------HHHHHHHHHHHHHHHHhhhhhhhhccCCchhHHHHHHHHH
Confidence 334444555555656677788988888 999999 9999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhh----hHHHHHHHHHHhhhcccchhhH-HHHhhhhccccchhhHHHHHHHHhHHHHH-HHHhHHHHhhhcc
Q 011783 124 IFNTLFGLSV----NFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLI-IGPALGGFLAQPA 197 (477)
Q Consensus 124 i~~~~~~~~~----~~~~l~~~r~l~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~-~g~~~~~~l~~~~ 197 (477)
++.+.+++++ +++.+++.|++.|++.+...+. ...+.|++|+++|++++++++.+.++|.. .+|+++..+.. .
T Consensus 105 i~~~~~~~~~~~~~~~~~~~~~~~l~gi~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~~~~~-~ 183 (452)
T PRK11273 105 AVMLFMGFVPWATSSIAVMFVLLFLCGWFQGMGWPPCGRTMVHWWSQKERGGIVSVWNCAHNVGGGLPPLLFLLGMAW-F 183 (452)
T ss_pred HHHHHHHhhhcccccHHHHHHHHHHHHHHHhccchHHHHHHHHhCChHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHH-h
Confidence 9999888763 7888999999999998887776 78889999999999999999999999874 45554433332 2
Q ss_pred ccCCcccccccccccccc-hHHHHHHHHHhhccccccCCCCCCccchhhhhhhhhhccchhhcccCCch-hhhhhcchhh
Q 011783 198 EKYPNLFSSESLFGKFPY-FLPCLCISLFAFGETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATP-KKSLLKNWPL 275 (477)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 275 (477)
. +|+..|..... .....++..+.++|+++....+++++. . ++..+..++.++++.+.... .+.++|++.+
T Consensus 184 ~------gw~~~f~i~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (452)
T PRK11273 184 N------DWHAALYMPAFAAILVALFAFAMMRDTPQSCGLPPIEEY-K-NDYPDDYNEKHEQELTAKQIFMQYVLPNKLL 255 (452)
T ss_pred c------cHHHHHHHHHHHHHHHHHHHHHHccCCHhhcCCCChhhh-h-hccccccccccCCCccHHHHHHHHHHcChHH
Confidence 2 44444411111 122223344556666543211111100 0 00000000000000000111 2346788999
Q ss_pred HHHHHHHHHHHhhhhhhHHHHHHhhcCcccCCccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHhh--cchhHHH-HHH
Q 011783 276 MSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERIL--GPIMVAR-IAG 352 (477)
Q Consensus 276 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~--~~~~~~~-~~~ 352 (477)
|...+..++..........++|.|+.+. .|++..+.+.......++.+++.+ +.++++||+ +||.... ...
T Consensus 256 ~~~~l~~~~~~~~~~~~~~~~P~~l~~~-----~g~s~~~~~~~~~~~~~~~~~g~~-~~G~l~dr~~~~r~~~~~~~~~ 329 (452)
T PRK11273 256 WYIAIANVFVYLLRYGILDWSPTYLKEV-----KHFALDKSSWAYFLYEYAGIPGTL-LCGWMSDKVFRGNRGATGVFFM 329 (452)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHh-----cCCCHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHccCCcchHHHHHH
Confidence 8887777777666667778889888754 688888889888888888888888 899999998 4443322 222
Q ss_pred HHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhhhhHHHHhHHHHHHhhcCCcchhhHHhHHHHHHHHHHHHH-hhhHHH
Q 011783 353 VLTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIAMTGMSLFKAA-GPAGGG 431 (477)
Q Consensus 353 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~-~~~~~g 431 (477)
.+..++.+.+..... .. .+.. .+..+..+............+..|.+|++.||+++|+.+....+|+.+ +|.+.|
T Consensus 330 ~l~~~~~~~~~~~~~-~~--~~~~-~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~g~~v~g 405 (452)
T PRK11273 330 TLVTIATIVYWLNPA-GN--PTVD-MACMIVIGFLIYGPVMLIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIVG 405 (452)
T ss_pred HHHHHHHHHHHHhcc-cC--hHHH-HHHHHHHHHHHHhHHHHHHHHHHHHcChhhhhhHHHHHHHHHHHHHHHhhhhhHH
Confidence 222222222211111 11 1111 111222222222222333456678899999999999999999888765 799999
Q ss_pred HHHHHhhhhccccCCCCchHHHHHHHHHHHHHHHHHhhhhhhcc
Q 011783 432 ALFSWAQKRLDASFLPGSQMVFFVLNVVEAIGVLMTFKPFLAQR 475 (477)
Q Consensus 432 ~l~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 475 (477)
.+.|+. ||+..|.+++++++++++........|+
T Consensus 406 ~l~~~~----------g~~~~f~~~~~~~~~~~~~~~~~~~~~~ 439 (452)
T PRK11273 406 YTVDFF----------GWDGGFMVMIGGSILAVILLIVVMIGEK 439 (452)
T ss_pred HHHHHh----------cchHHHHHHHHHHHHHHHHHHHHhcccc
Confidence 999998 8889999888888887776654333333
No 20
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=100.00 E-value=5.5e-35 Score=277.97 Aligned_cols=360 Identities=14% Similarity=0.102 Sum_probs=263.7
Q ss_pred HhhhchhchHhHHHHHHHHhcccccchhhhhhhHHHHHHHHHHHHHHhhhhhhhhhhcCCchhhHHHHHHHHHHHHHHHh
Q 011783 52 CTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGL 131 (477)
Q Consensus 52 ~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~Grr~~~~~~~~~~~i~~~~~~~ 131 (477)
+.........+..|.+.+++|.+..+ .|++.+++.+++.+++++.|+++||+|||+++..+.++.+++.+++++
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~s~~~------~g~~~s~~~~~~~~~~~~~G~l~d~~G~r~~~~~~~~~~~~~~~~~~~ 87 (377)
T TIGR00890 14 FTSGYVYTWTLLAPPLGRYFGVGVTA------VAIWFTLLLIGLAMSMPVGGLLADKFGPRAVAMLGGILYGLGFTFYAI 87 (377)
T ss_pred HHhhHHhhhhhHHHHHHHHhCCCHHH------HHHHHHHHHHHHHHHhhhhHHHHHHcCccchhHHhHHHHHHHHHHHHH
Confidence 33334667788999999999999999 999999999999999999999999999999999999999999999999
Q ss_pred hhhHHHHHHHHHHhhhcccchhhH-HHHhhhhccccchhhHHHHHHHHhHHHHHHHHhHHHHhhhccccCCccccccccc
Q 011783 132 SVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSESLF 210 (477)
Q Consensus 132 ~~~~~~l~~~r~l~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~~~~~~~~ 210 (477)
++|++.+++.|++.|++.+...+. ...+.|++| |+|+++.++...+.++|..+++++.+.+.+ ..+||..|
T Consensus 88 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~-------~~~~~~~f 159 (377)
T TIGR00890 88 ADSLAALYLTYGLASAGVGIAYGIALNTAVKWFP-DKRGLASGIIIGGYGLGSFILSPLITSVIN-------LEGVPAAF 159 (377)
T ss_pred HHHHHHHHHHHHHHhHHHHHHHHhHHHHHHHHcC-cccHHHHHHHHHhcchhHhHHHHHHHHHHh-------cccHHHHH
Confidence 999999999999999998887666 778888887 679999999999999999887777666665 33555544
Q ss_pred ccccchHHH-HHHHHHhhccccccCCCCCCccchhhhhhhhhhccchhhcccCCchhhhhhcchhhHHHHHHHHHHHhhh
Q 011783 211 GKFPYFLPC-LCISLFAFGETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKSLLKNWPLMSSIIVYCVFSLHD 289 (477)
Q Consensus 211 ~~~~~~~~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 289 (477)
......... .+.....+++.++++++++++ .++.....++.+|++.++......++.....
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (377)
T TIGR00890 160 IYMGIIFLLVIVLGAFLIGYPPGQLIKTNIE------------------VSVKDYTVWEMLRTPQFWVLYLSFFLNAVSG 221 (377)
T ss_pred HHHHHHHHHHHHHHHHheecCchhccccCcc------------------cchhhhhHHHHHcCccHHHHHHHHHHHhHHH
Confidence 111111111 112222233322111100000 0001123456778888877666655554444
Q ss_pred hhhHHHHHHhhcCcccCCccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHHHhh
Q 011783 290 MAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTIPLLTSYPYIAMLS 369 (477)
Q Consensus 290 ~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 369 (477)
.....+.+.|..+ ++.+..+.+.......++.+++++ ..+++.||++||+.+..+..+..++...+.......
T Consensus 222 ~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~-~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (377)
T TIGR00890 222 LLLIGLYKPYGQS------LGLSDGFLVLAVSISSIFNGGGRP-FLGALSDKIGRQKTMSIVFGISAVGMAAMLFIPMLN 294 (377)
T ss_pred HHHHHHHHHHHHH------cCCCHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHcccch
Confidence 4444444444332 678888889999999999999988 899999999999998888877777766554433211
Q ss_pred hhhHHHHHHHHHHHHhhhhHHHHhHHHHHHhhcCCcchhhHHhHHHHHHHHHHHHHhhhHHHHHHHHhhhhccccCCCCc
Q 011783 370 GFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIAMTGMSLFKAAGPAGGGALFSWAQKRLDASFLPGS 449 (477)
Q Consensus 370 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~g~ 449 (477)
.. .......+.++..+...+....+..|.+|+++|+++.|+.+....+|..++|.+.|.+.++. ||
T Consensus 295 ---~~-~~~~~~~~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~----------g~ 360 (377)
T TIGR00890 295 ---DV-LFLATVALVFFTWGGTISLFPSLVSDIFGPANSAANYGFLYTAKAVAGIFGGLIASHALTEI----------GF 360 (377)
T ss_pred ---hH-HHHHHHHHHHHHhccchhccHHHHHHHhhhhhhhhHhHHHHHHHHHHHHHHHHHHHHHHhhh----------ch
Confidence 11 11111222234444555666778889999999999999999999999999999999999887 88
Q ss_pred hHHHHHHHHHHHHHH
Q 011783 450 QMVFFVLNVVEAIGV 464 (477)
Q Consensus 450 ~~~~~~~~~~~~~~~ 464 (477)
+..|.+.+++.+++.
T Consensus 361 ~~~f~~~~~~~~~~~ 375 (377)
T TIGR00890 361 EYTFIVTGAFALTSL 375 (377)
T ss_pred hhHHHHHHHHHHHhc
Confidence 899988887777654
No 21
>PRK03633 putative MFS family transporter protein; Provisional
Probab=100.00 E-value=6e-34 Score=270.30 Aligned_cols=365 Identities=15% Similarity=0.144 Sum_probs=276.9
Q ss_pred hhHHHHHHHHHHHhhhchhchHhHHHHHHHHhcccccchhhhhhhHHHHHHHHHHHHHHhhhhhhhhhhcCCchhhHHHH
Q 011783 40 ITELFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGT 119 (477)
Q Consensus 40 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~Grr~~~~~~~ 119 (477)
++.++.++.+.++..++.+...+.+|.+.+++|.|..+ .|++.+.+.+++.+++++.|+++||+|||+++..+.
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~s~~~------~G~~~s~~~l~~~~~~~~~g~l~dr~g~k~~~~~~~ 78 (381)
T PRK03633 5 TRPVLLLLCGLLLLTLAIAVLNTLVPLWLAQEHLPTWQ------VGVVSSSYFTGNLVGTLLAGYVIKRIGFNRSYYLAS 78 (381)
T ss_pred HHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHcCCCHHH------HHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHH
Confidence 35577888999999999999999999999999999999 999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhhhHHHHHHHHHHhhhcccchhhH-HHHhhhhccccchhhHHHHHHHHhHHHHHHHHhHHHHhhhccc
Q 011783 120 ASVVIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAE 198 (477)
Q Consensus 120 ~~~~i~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~ 198 (477)
++.+++.+.+++++|++.+++.|+++|++.+...|. .+.+.+..++++|+++++.++.+.++|..+||.+++.+.+..
T Consensus 79 ~~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~~- 157 (381)
T PRK03633 79 LIFAAGCAGLGLMVGFWSWLAWRFVAGIGCAMIWVVVESALMCSGTSRNRGRLLAAYMMVYYLGTVLGQLLVSKVSTEL- 157 (381)
T ss_pred HHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccc-
Confidence 999999999999999999999999999999888777 788888999999999999999999999999999999987631
Q ss_pred cCCcccccccccccccchHHHHHHHHHhhccccccCCCCCCccchhhhhhhhhhccchhhcccCCchhhhhhcchhhHHH
Q 011783 199 KYPNLFSSESLFGKFPYFLPCLCISLFAFGETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKSLLKNWPLMSS 278 (477)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 278 (477)
+ +...|.... ... ..+.++..+..++ ++++ + ...+.++.+|+|.++..
T Consensus 158 -~-~~~~~~~~~-----~~~-~~~~~~~~~~~~~----~~~~-~-------------------~~~~~~~~~~~~~~~~~ 205 (381)
T PRK03633 158 -M-SVLPWVTGL-----VLA-AILPLLFTRILNQ----QAEN-H-------------------DSTSIWPMLKLRQARLG 205 (381)
T ss_pred -c-chHHHHHHH-----HHH-HHHHHHHhcccCC----CCCC-C-------------------CCCCHHHHHHhcchHHH
Confidence 1 112222111 111 1111111111110 0000 0 01234556777777655
Q ss_pred HHHHHHHHhhhhhhHHHHHHhhcCcccCCccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHH
Q 011783 279 IIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTIPL 358 (477)
Q Consensus 279 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 358 (477)
....+...........+.|.|..+ .|.++.+.+...+...++.++++. ..+++.||+++|+.+..+..+..++
T Consensus 206 ~~~~~~~~~~~~~~~~~lp~~~~~------~g~s~~~~g~~~~~~~~~~~~~~~-~~g~l~dr~~~~~~l~~~~~~~~~~ 278 (381)
T PRK03633 206 VNGCIISGIVLGSLYGLMPLYLNH------QGMSDASIGFWMALLVSAGILGQW-PIGRLADRFGRLLVLRVQVFVVILG 278 (381)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH------cCCCHHHHHHHHHHHHHHHHHHHh-hhHHHHHHcCcHHHHHHHHHHHHHH
Confidence 443444333344455667777653 588888999999998999999998 8899999999999888877776665
Q ss_pred HHHHHHHHHhhhhhHHHHHHHHHHHHhhhhHHHHhHHHHHHhhcCCcchhhHHhHHHHHHHHHHHHHhhhHHHHHHHHhh
Q 011783 359 LTSYPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIAMTGMSLFKAAGPAGGGALFSWAQ 438 (477)
Q Consensus 359 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~~ 438 (477)
..... .. .... ....+.+.......|...+...+..|+++++...+..+...++|..++|.+.|.+.|+.
T Consensus 279 ~~~~~--~~---~~~~----~~~~l~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~igp~~~G~l~~~~- 348 (381)
T PRK03633 279 SIAML--SQ---AAMA----PALFILGAAGFTLYPVAMAWACEKVEHHELVAMNQALLLSYTVGSLLGPSFTAMLMQNY- 348 (381)
T ss_pred HHHHh--hh---HHHH----HHHHHHHHHHHhHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-
Confidence 54332 11 0111 11122233445667888888889899888888888888889999999999999999988
Q ss_pred hhccccCCCCchHHHHHHHHHHHHHHHHHhh
Q 011783 439 KRLDASFLPGSQMVFFVLNVVEAIGVLMTFK 469 (477)
Q Consensus 439 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 469 (477)
|++..|.+.+.+.++..+..++
T Consensus 349 ---------g~~~~f~~~~~~~l~~~~~~~~ 370 (381)
T PRK03633 349 ---------SDNLLFIMIASVSFIYLLMLLR 370 (381)
T ss_pred ---------CccHHHHHHHHHHHHHHHHHHh
Confidence 8888999988888877766655
No 22
>PRK09952 shikimate transporter; Provisional
Probab=100.00 E-value=1.1e-33 Score=272.47 Aligned_cols=395 Identities=14% Similarity=0.098 Sum_probs=260.5
Q ss_pred hhHHHHHHHHHHHhhhchhchHhHHHH-HHHHh--cccccchhhhhhhHHH-----HHHHHHHHHHHhhhhhhhhhhcCC
Q 011783 40 ITELFSIWIIVLCTALPISSLFPFLYF-MIKDF--QIAKREEDIGSYAGYV-----GSSFMFGRALTSVFWGLVADRYGR 111 (477)
Q Consensus 40 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~--~~s~~~~~~~~~~g~~-----~s~~~~~~~~~~~~~G~l~Dr~Gr 111 (477)
++.+....++.+++.+|...+....|. +.+++ +.++.+ +++ .++..++..+++++.|+++||+||
T Consensus 21 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~g~~~~G~l~Dr~Gr 93 (438)
T PRK09952 21 RRAALGSFAGAVVDWYDFLLYGITAALVFNREFFPQVSPAM-------GTLAAFATFGVGFLFRPLGGVVFGHFGDRLGR 93 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcHH-------HHHHHHHHHHHHHHHHhhHHHHHHHHHHhhcc
Confidence 455667778899999999998888874 55555 555443 333 245667788999999999999999
Q ss_pred chhhHHHHHHHHHHHHHHHhhhhHH--------HHHHHHHHhhhcccchhhH-HHHhhhhccccchhhHHHHHHHHhHHH
Q 011783 112 KPVIIMGTASVVIFNTLFGLSVNFW--------MAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIG 182 (477)
Q Consensus 112 r~~~~~~~~~~~i~~~~~~~~~~~~--------~l~~~r~l~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g 182 (477)
|+++..+.++++++++++++++|+. .+++.|+++|++.|...+. ..++.|++|+++|++..+..+.+..+|
T Consensus 94 r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~~~e~~p~~~rg~~~~~~~~g~~~G 173 (438)
T PRK09952 94 KRMLMLTVWMMGIATALIGLLPSFSTIGWWAPVLLVTLRAIQGFAVGGEWGGAALLAVESAPKNKKAFYSSGVQVGYGVG 173 (438)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhhhcccHHHHHHHHHHhCCCCCCcHHHHHHHHHHHHH
Confidence 9999999999999999999999987 5889999999999998887 999999999999999999999999999
Q ss_pred HHHHHhHHHHhhhccccCC-cccccccccccccchHHHHH-HHHHhhccccccCCCCCCccchhhhhhhhhhccchhhcc
Q 011783 183 LIIGPALGGFLAQPAEKYP-NLFSSESLFGKFPYFLPCLC-ISLFAFGETLHRHNDDDDSCDVSYDALESASAEVKEEEG 260 (477)
Q Consensus 183 ~~~g~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~~-~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (477)
.++++.+...+.....++. ..++||..|. ......... ......||++++.+.+++ .++ .+
T Consensus 174 ~~l~~~~~~~l~~~~~~~~~~~~gWr~~f~-~~~~~~l~~~~l~~~~~es~~~~~~~~~------------~~~----~~ 236 (438)
T PRK09952 174 LLLSTGLVSLISMMTTDEQFLSWGWRIPFL-FSIVLVLIALWVRNGMEESAEFEQQQHE------------QAA----AK 236 (438)
T ss_pred HHHHHHHHHHHHHhCCHHHhhccChHHHHH-HHHHHHHHHHHHHHhCCCChhHHHHHhh------------ccc----cc
Confidence 9999888777654221111 0256666652 111111000 001112333221100000 000 00
Q ss_pred cCCchhhhhhcchhhHHHHH-HHHHHHhhhhhhHHHHHHhhcCcccCCccccchhhhHHHHHHHHHHHHHHHHHHHHHHH
Q 011783 261 REATPKKSLLKNWPLMSSII-VYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLE 339 (477)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~ 339 (477)
+.....+.++++++.+.... ..++.....+....+.+.|..+. +|++...........++...++.+ +.+++.
T Consensus 237 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~-----~g~s~~~~~~~~~~~g~~~~i~~~-~~g~l~ 310 (438)
T PRK09952 237 KRIPVIEALLRHPGAFLKIIALRLCELLTMYIVTAFALNYSTQN-----LGLPRELFLNIGLLVGGLSCLTIP-CFAWLA 310 (438)
T ss_pred ccCCHHHHHHHchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-----cCCCHHHHHHHHHHHHHHHHHHHH-HHHHHH
Confidence 01112234566766665443 33333444445556677666543 677776655555555666677776 889999
Q ss_pred HhhcchhHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhhhhHHHHhHHHHHHhhcCCcchhhHHhHHHHHHH
Q 011783 340 RILGPIMVARIAGVLTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIAMTGM 419 (477)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~ 419 (477)
||++||+.+..+.++..+....+.......+ ....+....++.++..+...+..+++..|.+|++.|+++.|+.+...
T Consensus 311 Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~~~~~~~~~~~~~~~~e~~p~~~r~tg~g~~~~~~ 388 (438)
T PRK09952 311 DRFGRRRVYITGALIGTLSAFPFFMALEAQS--IFWIVFFSIMLANIAHDMVVCVQQPMFTEMFGASYRYSGAGVGYQVA 388 (438)
T ss_pred HHhCchHHHHHHHHHHHHHHHHHHHHHHcCC--hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCcchhHHHHhHHHHHH
Confidence 9999999888776655444332222111111 11122222333345555667777889999999999999999976654
Q ss_pred -HHHHHHhhhHHHHHHHHhhhhccccCCCCchHHHHHHHHHHHHHHHHHhhhhhhccC
Q 011783 420 -SLFKAAGPAGGGALFSWAQKRLDASFLPGSQMVFFVLNVVEAIGVLMTFKPFLAQRH 476 (477)
Q Consensus 420 -~~g~~~~~~~~g~l~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 476 (477)
.+++.++|.+.|++.+.... +|...+.+.+++.+++.+..+. .|+++
T Consensus 389 ~~lgg~~~p~i~g~l~~~~~~--------~~~~~~~~~~~~~~i~~v~~~~--~~~~~ 436 (438)
T PRK09952 389 SVVGGGFTPFIAAALVTYFGG--------SWHSVAIYLLAGCLISAMTALL--MKDNQ 436 (438)
T ss_pred HHHHHHHHHHHHHHHHHhcCC--------CchHHHHHHHHHHHHHHHHHHH--ccccc
Confidence 58999999999999885411 3667778787777777776654 45443
No 23
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=100.00 E-value=5.7e-35 Score=287.15 Aligned_cols=400 Identities=17% Similarity=0.119 Sum_probs=269.0
Q ss_pred HHHHHHHHhhhchhchHhHHHHHHHHhccc--------ccchhhhhhhHHHHHHHHHHHHHHhhhhhhhhhhcCCchhhH
Q 011783 45 SIWIIVLCTALPISSLFPFLYFMIKDFQIA--------KREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVII 116 (477)
Q Consensus 45 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s--------~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~Grr~~~~ 116 (477)
.+.+..++..++...+.+..|.+.++++.+ ..+ .+++.+++.++..++++++|+++||+|||++++
T Consensus 32 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~i~~~~~g~l~d~~grr~~~~ 105 (481)
T TIGR00879 32 IAAIGGLMFGYDTGVIGGALALPAFEFKFTSANSDSYSSSL------WGLVVSIFLVGGFIGALFAGWLSDRFGRKKSLL 105 (481)
T ss_pred HHHHHHHhcccccchhhhhhhcHHHHHhcCCcccCCCChhH------HHHHHHHHHHHHHHHHHHhhHhhhhhhhHHHHH
Confidence 344455667778888899999999898887 566 999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhh---hhHHHHHHHHHHhhhcccchhhH-HHHhhhhccccchhhHHHHHHHHhHHHHHHHHhHH--
Q 011783 117 MGTASVVIFNTLFGLS---VNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALG-- 190 (477)
Q Consensus 117 ~~~~~~~i~~~~~~~~---~~~~~l~~~r~l~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~-- 190 (477)
.+.++..++.+++.+. .+++.+++.|+++|++.+...+. .++++|++|+++|++++++.+.+..+|..+++.++
T Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~ 185 (481)
T TIGR00879 106 IIALLFVIGAILMGLAAFALSVEMLIVGRVLLGIGVGIASALVPMYLSEIAPKALRGALTSLYQLAITFGILVAYGFGSG 185 (481)
T ss_pred HHHHHHHHHHHHHHHhccccchHHHHHHHHHHHhhhhHHHhHHHHHHHccCChhhhhhhhhHHHHHHHHHHHHHHHHHHH
Confidence 9999999999988654 35668999999999999988887 99999999999999999999999999999999998
Q ss_pred -HHhhhccccCCcccccccccccccchHHHHHHHHHhhccccccCCCCCCccc--hhhhhhhhhhc--------------
Q 011783 191 -GFLAQPAEKYPNLFSSESLFGKFPYFLPCLCISLFAFGETLHRHNDDDDSCD--VSYDALESASA-------------- 253 (477)
Q Consensus 191 -~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~--~~~~~~~~~~~-------------- 253 (477)
....+ ..+||..|..........++..+.+||+++....+++..+ +..++......
T Consensus 186 ~~~~~~-------~~~w~~~f~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (481)
T TIGR00879 186 KVSLNN-------TLGWRIPLGLQLIPAGLLFLGLFFLPESPRWLVGKGRVEEARKSLARLRGTSGEDKELLDELELIDI 258 (481)
T ss_pred hhcCCC-------CccHHHHHHHHHHHHHHHHHHHhcCCCChHHHHHcCChHHHHHHHHHHhCCCCCcHHHHHHHHHHHH
Confidence 44433 3345544422111223333444567776543111111100 00000000000
Q ss_pred cchhhcccCCchhhhhhcc------hhhHHHHHHHHHHHhhhhhhHHHHHHhhcCcccCCccccchhhhHHHHHHHHHHH
Q 011783 254 EVKEEEGREATPKKSLLKN------WPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSL 327 (477)
Q Consensus 254 ~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~ 327 (477)
....++......+++.++. +.++...+..+...........+.+.+... .|++..+.+.......++.
T Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~g~~~~~~~~~~~~~~~~~ 332 (481)
T TIGR00879 259 KRSIEKRSVQPSWGSLFSSTRRIRRRLFLGVVLQWFQQFTGINAIMYYSPTIFEN------AGVSTDHAFLVSIIVGAVN 332 (481)
T ss_pred HHHHHHhhccccHHHHHhcCchhHHHHHHHHHHHHHHHHhCCeehHHHHHHHHHH------cCCCchHHHHHHHHHHHHH
Confidence 0000000001112223321 222222222222222222333344444332 6888888888888888889
Q ss_pred HHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHHHhhhh-----hHHHHHHHHHHHHhhhhHHHHhHHHHHHhhc
Q 011783 328 LVFQLSLYPFLERILGPIMVARIAGVLTIPLLTSYPYIAMLSGF-----GLAFLLNCASVVKNLLSVSIITGLFILQNRA 402 (477)
Q Consensus 328 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 402 (477)
+++.+ +.+++.||+++|+.+..+..+..++++.+......... .....+....+...++.....+....+..|.
T Consensus 333 ~~~~~-~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 411 (481)
T TIGR00879 333 FAFTF-VAIFLVDRFGRRPLLLIGAAGMAICLFVLGILGASFVTGSSKSSGNVAIVFILLFIAFFAMGWGPVPWVIVSEI 411 (481)
T ss_pred HHHHH-HHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHhhcccCCcccchhHHHHHHHHHHHHHHHccccCeehhhhhcc
Confidence 99888 88999999999999988877777766655432211111 0122222222222333444456667778999
Q ss_pred CCcchhhHHhHHHHHHHHHHHHHhhhHHHHHHHHhhhhccccCCCCchHHHHHHHHHHHHHHHHHhhhhhhcc
Q 011783 403 VDQDQRGAANGIAMTGMSLFKAAGPAGGGALFSWAQKRLDASFLPGSQMVFFVLNVVEAIGVLMTFKPFLAQR 475 (477)
Q Consensus 403 ~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 475 (477)
+|++.|+++.|+.+...++|++++|.+.|.+.++. ++...|++.+++++++.++.++ ..||+
T Consensus 412 ~p~~~~~~~~~~~~~~~~lg~~i~~~~~~~~~~~~----------~~~~~f~~~~~~~~~~~i~~~~-~~~~~ 473 (481)
T TIGR00879 412 FPLSLRPKGISIAVAANWLANFIVGFLFPTMLESI----------GVGGVFIFFGGLNVLGLIFVYF-FLPET 473 (481)
T ss_pred CChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc----------CccceehhHHHHHHHHHHHHhe-ecccC
Confidence 99999999999999999999999999999999886 7888888888888887776654 34443
No 24
>PRK03699 putative transporter; Provisional
Probab=100.00 E-value=8.4e-34 Score=270.40 Aligned_cols=370 Identities=12% Similarity=0.104 Sum_probs=272.1
Q ss_pred chhHHHHHHHHHHHhhhchhchHhHHHHHHHHhcccccchhhhhhhHHHHHHHHHHHHHHhhhhhhhhhhcCCchhhHHH
Q 011783 39 PITELFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMG 118 (477)
Q Consensus 39 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~Grr~~~~~~ 118 (477)
+++..+..++..++.........+.+|.+.+++|.+.++ .+++.+.+.+++.+++++.|++.||+|||+++..+
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~i~~~~~~s~~~------~g~~~s~~~~~~~i~~~~~g~l~dr~g~r~~~~~~ 78 (394)
T PRK03699 5 RIKLTWISFLSYALTGALVIVTGMVMGPIAEYFNLPVSS------MSNTFTFLNAGILISIFLNAWLMEIIPLKRQLIFG 78 (394)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHhCCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHH
Confidence 345566777788888888888999999999999999999 99999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhhhHHHHHHHHHHhhhcccchhhH-HHHhhhhccccchhhHHHHHHHHhHHHHHHHHhHHHHhhhcc
Q 011783 119 TASVVIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPA 197 (477)
Q Consensus 119 ~~~~~i~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~ 197 (477)
.++.+++.++++++++++++++.|+++|++.+...+. .+++.|++|+++|+++++..+....+|..++|.+.+.+....
T Consensus 79 ~~~~~i~~~l~~~~~~~~~~~~~~~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~ 158 (394)
T PRK03699 79 FALMILAVAGLMFSHSLALFSIAMFVLGVVSGITMSIGTFLITHVYEGKQRGSRLLFTDSFFSMAGMIFPIIAAYLLARS 158 (394)
T ss_pred HHHHHHHHHHHHHcchHHHHHHHHHHHHHhhHhhccchhHHhhhhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 9999999999999999999999999999998887776 899999999999999999999999999999999988876533
Q ss_pred ccCCcccccccccccccchHHHHHHHHHhhccccccCCCCCCccchhhhhhhhhhccchhhcccCCchhhhhhcchhhHH
Q 011783 198 EKYPNLFSSESLFGKFPYFLPCLCISLFAFGETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKSLLKNWPLMS 277 (477)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 277 (477)
++||..|....... .....+....+.++.+++ ++ ++. +. ..++ ..++.++.
T Consensus 159 ------~gw~~~f~~~~~~~-~~~~~~~~~~~~p~~~~~--~~-~~~--------------~~----~~~~-~~~~~~~~ 209 (394)
T PRK03699 159 ------IEWYWVYACIGLVY-VAIFILTLFSEFPALGKH--AP-KAD--------------KP----VAKE-KWGIGVLF 209 (394)
T ss_pred ------ccHHHHHHHHHHHH-HHHHHHHHhcCCcccccc--Cc-ccc--------------Cc----cccc-cCChHHHH
Confidence 34444441111111 111111111222211100 00 000 00 0011 12355555
Q ss_pred HHHHHHHHHhhhhhhHHHHHHhhcCcccCCccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHH
Q 011783 278 SIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTIP 357 (477)
Q Consensus 278 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 357 (477)
..+..++.......+..+.|.|+.+. +|+++.+.+.+.+...++..++.+ +.+++.||+++|+.+.....+..+
T Consensus 210 ~~~~~~~~~~~~~~~~~~~p~~l~~~-----~g~s~~~~~~~~~~~~~~~~ig~~-~~g~l~dr~~~~~~l~~~~~~~~~ 283 (394)
T PRK03699 210 LAIAALLYILAQLTFISWVPEYAQKK-----FGMSLEDAGNLVSNFWMAYMVGMW-IFSFIVRFFDLQRILTVLAGLALV 283 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH-----cCCChHHhhHHHHHHHHHHHHHHH-HHHHHHHHhchhhHHHHHHHHHHH
Confidence 55666666666667778888887644 789999999999999999999988 899999999999988777665555
Q ss_pred HHHHHHHHHHhhhhhHHHHHHHHHHHHhhhhHHHHhHHHHHHhhcCCcchhhHHhHHHHHHHHHHHHHhhhHHHHHHHHh
Q 011783 358 LLTSYPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIAMTGMSLFKAAGPAGGGALFSWA 437 (477)
Q Consensus 358 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~ 437 (477)
.+..+.... +.. + .....+..+++.+..++...+...+..| +.+++..|......++|..++|.+.|.+.+..
T Consensus 284 ~~~~~~~~~---~~~-~--~~~~~~~~G~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~i~p~~~G~l~~~~ 356 (394)
T PRK03699 284 LMYLFVNTD---DPS-H--LLYAILGLGFFSSAIYTTIITLGSQQTK-VASPKLVNFILTCGTIGTMLTFVVTSPIVAHF 356 (394)
T ss_pred HHHHHHHcC---Cch-H--HHHHHHHHHHHHHHHHHHHHHHHHHHcc-CCCHHHHHHHHHhhhHHHHHHHHHHHHHHHHh
Confidence 444433222 111 1 1222333455566667777777777665 45678889999999999999999999999987
Q ss_pred hhhccccCCCCchHHHHHHHHHHHHHHHH
Q 011783 438 QKRLDASFLPGSQMVFFVLNVVEAIGVLM 466 (477)
Q Consensus 438 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 466 (477)
|++..+++.+++++++.+.
T Consensus 357 ----------g~~~~~~~~~~~~~~~~~~ 375 (394)
T PRK03699 357 ----------GLQAALLTANGLYAVVFVM 375 (394)
T ss_pred ----------CchhhhhhhHHHHHHHHHH
Confidence 7778888777777666443
No 25
>PRK10091 MFS transport protein AraJ; Provisional
Probab=100.00 E-value=1e-33 Score=268.73 Aligned_cols=369 Identities=15% Similarity=0.165 Sum_probs=263.3
Q ss_pred hHHHHHHHHHHHhhhchhchHhHHHHHHHHhcccccchhhhhhhHHHHHHHHHHHHHHhhhhhhhhhhcCCchhhHHHHH
Q 011783 41 TELFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTA 120 (477)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~Grr~~~~~~~~ 120 (477)
+.++.+.+..++.........+.+|.+.+|+|.+..+ .|++.+.+.+++.++++++|+++||+|||+++..+.+
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~s~~~------~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~ 76 (382)
T PRK10091 3 KVILSLALGTFGLGMAEFGIMGVLTELAHDVGISIPA------AGHMISYYALGVVVGAPIIALFSSRYSLKHILLFLVA 76 (382)
T ss_pred chHHHHHHHHHHHHhhHHHHHhChHHHHHHcCCCHHH------HhHHHHHHHHHHHHHHHHHHHHHccCccHHHHHHHHH
Confidence 4567778888888899999999999999999999999 9999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhhhHHHHHHHHHHhhhcccchhhH-HHHhhhhccccchhhHHHHHHHHhHHHHHHHHhHHHHhhhcccc
Q 011783 121 SVVIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEK 199 (477)
Q Consensus 121 ~~~i~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~ 199 (477)
+.+++.+++++++|++++++.|+++|++.+...+. ..++.|++|+++|++++++...+..+|..++|++++.+.+
T Consensus 77 ~~~~~~~l~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~---- 152 (382)
T PRK10091 77 LCVIGNAMFTLSSSYLMLAIGRLVSGFPHGAFFGVGAIVLSKIIKPGKVTAAVAGMVSGMTVANLLGIPLGTYLSQ---- 152 (382)
T ss_pred HHHHHHHHHHHhCcHHHHHHHHHHHHhhhHHHHHHHHHHHHHhCChHHhhHHHHHHHHHHHHHHHHhccHHHHHhh----
Confidence 99999999999999999999999999998887777 8889999999999999999999999999999999999887
Q ss_pred CCcccccccccccccc-hHHHHHHHHHhhccccccCCCCCCccchhhhhhhhhhccchhhcccCCchhhhhhcchhhHHH
Q 011783 200 YPNLFSSESLFGKFPY-FLPCLCISLFAFGETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKSLLKNWPLMSS 278 (477)
Q Consensus 200 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 278 (477)
.++||+.|..... .....+.....+||.++. ++.+. ....+.+|++..+..
T Consensus 153 ---~~gwr~~f~~~~~~~~~~~~~~~~~lp~~~~~-----~~~~~--------------------~~~~~~~~~~~~~~~ 204 (382)
T PRK10091 153 ---EFSWRYTFLLIAVFNIAVLASIYFWVPDIRDE-----AKGGL--------------------REQFHFLRSPAPWLI 204 (382)
T ss_pred ---hccHHHHHHHHHHHHHHHHHHHHHhCCCCCcc-----cccCH--------------------HHHHHHhcChHHHHH
Confidence 3455554421111 111112222334443210 00000 011234566666655
Q ss_pred HHHHHHHHhhhhhhHHHHHHhhcCcccCCccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHH
Q 011783 279 IIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTIPL 358 (477)
Q Consensus 279 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 358 (477)
.....+..........+.+.+..+. +|+++.+.+++.+...++.+++++ +.+++.||+++++.+..+..+..++
T Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~-----~g~s~~~~~~~~~~~~~~~~ig~~-~~g~l~~r~~~~~~~~~~~~~~~i~ 278 (382)
T PRK10091 205 FAATMFGNAGVFAWFSYIKPYMMFI-----SGFSETSMTFIMMLVGLGMVLGNL-LSGRLSGRYSPLRIAAVTDFIIVLA 278 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHh-----cCCCHHHHHHHHHHHHHHHHHHhH-HHheeccccCchhHHHHHHHHHHHH
Confidence 4444333322333333344444322 789999999999999999999998 8999999999999988887777666
Q ss_pred HHHHHHHHHhhhhhHHHHHHHHHHHHhhhhHHHHhH-HHHHHhhcCCcchhhHHhHHHHHHHHHHHHHhhhHHHHHHHHh
Q 011783 359 LTSYPYIAMLSGFGLAFLLNCASVVKNLLSVSIITG-LFILQNRAVDQDQRGAANGIAMTGMSLFKAAGPAGGGALFSWA 437 (477)
Q Consensus 359 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~ 437 (477)
.+.+...... ... ... ...+.+.+.....+. ......+..|++.++.+. .+....+|.++||.++|.+.|..
T Consensus 279 ~~~~~~~~~~--~~~--~~~-~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~g~~~Gp~~~G~l~~~~ 351 (382)
T PRK10091 279 LLMLFFFGGM--KTA--SLI-FAFICCAGLFALSAPLQILLLQNAKGGELLGAAG--GQIAFNLGSAIGAYCGGMMLTLG 351 (382)
T ss_pred HHHHHHHHhh--HHH--HHH-HHHHHHHHHHhhhHHHHHHHHHhCCcchHHHHHH--HHHHHHHHHHHHHHHhHHHHHcc
Confidence 6544332221 111 111 111112222222332 223444545555565543 46678999999999999999864
Q ss_pred hhhccccCCCCchHHHHHHHHHHHHHHHHHhh
Q 011783 438 QKRLDASFLPGSQMVFFVLNVVEAIGVLMTFK 469 (477)
Q Consensus 438 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 469 (477)
.+|+..+.+.++++++.......
T Consensus 352 ---------~~~~~~~~~~~~~~~~~~~~~~~ 374 (382)
T PRK10091 352 ---------LAYNYVALPAALLSFAAMSSLLL 374 (382)
T ss_pred ---------cCcchHHHHHHHHHHHHHHHHHH
Confidence 16888888887776666555444
No 26
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=100.00 E-value=2.4e-34 Score=272.38 Aligned_cols=355 Identities=16% Similarity=0.093 Sum_probs=271.8
Q ss_pred HHHHHHHHhhhchhchHhHHHHHHHHhcccccchhhhhhhHHHHHHHHHHHHHHhhhhhhhhhhcCCchhhHHHHHHHHH
Q 011783 45 SIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVI 124 (477)
Q Consensus 45 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~Grr~~~~~~~~~~~i 124 (477)
.+....++..++.....+.+|.+.++++.+..+ .|++.+++.++..++++++|+++||+|||+++..+.++..+
T Consensus 3 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~------~g~~~~~~~~~~~i~~~~~G~l~dr~g~r~~~~~~~~~~~~ 76 (365)
T TIGR00900 3 LLFAAQLISLIGTAITQVALPLYVLAGTGSASV------LSLAALAGMLPYVVLSPIAGALADRYDRKKVMIGADLIRAV 76 (365)
T ss_pred ehHHHHHHHHHHHHHHHHHHHHHHHHhhccHHH------HHHHHHHHHHHHHHHHHhhhHHHHhhchhHHHHHHHHHHHH
Confidence 356778888888999999999999999999999 99999999999999999999999999999999999999999
Q ss_pred HHHHHHhhh-----hHHHHHHHHHHhhhcccchhhH-HHHhhhhccccchhhHHHHHHHHhHHHHHHHHhHHHHhhhccc
Q 011783 125 FNTLFGLSV-----NFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAE 198 (477)
Q Consensus 125 ~~~~~~~~~-----~~~~l~~~r~l~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~ 198 (477)
+.++..+++ +++.+++.|++.|++.+...+. .+++.|++|+++|++++++.+....+|..+||.+++.+.+
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~--- 153 (365)
T TIGR00900 77 LVAVLPFVALLGGLNIWQVYVLAGILAIAQAFFTPAYQAMLPDLVPEEQLTQANSLSQAVRSLFYIVGPGIGGLMYA--- 153 (365)
T ss_pred HHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHH---
Confidence 998888888 9999999999999999998888 9999999999999999999999999999999999999987
Q ss_pred cCCcccccccccccccchHHHHHHHHHhhccccccCCCCCCccchhhhhhhhhhccchhhcccCCchhhhhhcchhhHHH
Q 011783 199 KYPNLFSSESLFGKFPYFLPCLCISLFAFGETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKSLLKNWPLMSS 278 (477)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 278 (477)
.++|+..+...........+....+++.+ .+++++++.+ ++ ..++..+..+.++|+|.++..
T Consensus 154 ----~~g~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~---~~----------~~~~~~~~~~~~~~~~~~~~~ 215 (365)
T TIGR00900 154 ----TLGIKWAIWVDAVGFAISALLIVSVRIPE-LAASEIQALS---NA----------VLRDTREGIKFVLKNPLLRTL 215 (365)
T ss_pred ----HhhHHHHHHHHHHHHHHHHHHHHhccccc-CCCccccccc---hh----------HHHHHHhHHHHHHcCcHHHHH
Confidence 44555554111111111111111221111 0000000000 00 001112345677888888887
Q ss_pred HHHHHHHHhhhhhhH-HHHHHhhcCcccCCccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHH
Q 011783 279 IIVYCVFSLHDMAYS-EIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTIP 357 (477)
Q Consensus 279 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 357 (477)
....++......... .+.|.|..+. +|.++.+.+.......++.+++.. +.+++.||.++++....+..+..+
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~~~~~~~~~~~~~~~~~ 289 (365)
T TIGR00900 216 LLLALLFNLVFAPAIVALFPYVQSKY-----LGRGSTHYGWVLAAFGLGALLGAL-LLGLLGRYFKRMALMTGAIFVIGL 289 (365)
T ss_pred HHHHHHHHHHHHHHHHHHhHHHHHHH-----hCCchHHHHHHHHHHHHHHHHHHH-HHHHHHHHhchhHHHHHHHHHHHH
Confidence 777666665554444 6667666543 688999999999999999999988 788999999999988877666666
Q ss_pred HHHHHHHHHHhhhhhHHHHHHHHHHHHhhhhHHHHhHHHHHHhhcCCcchhhHHhHHHHHHHHHHHHHhhhHHHHHHHHh
Q 011783 358 LLTSYPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIAMTGMSLFKAAGPAGGGALFSWA 437 (477)
Q Consensus 358 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~ 437 (477)
.+....+... + .....+..++.+++.+...+...++..+.+|+++|+++.|+.+...+++..++|.+.|.+.|..
T Consensus 290 ~~~~~~~~~~--~---~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~g~~~~g~l~~~~ 364 (365)
T TIGR00900 290 AILVVGLTPP--N---FPLFLVLWFAIGVGYGPINVPQGTLLQRRVPAELLGRVFGAQFSLSHAAWPLGLILAGPLADHL 364 (365)
T ss_pred HHHHHHhhch--h---HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 6555544332 1 2233344455567777778888899999999999999999999999999999999999999865
No 27
>PRK10504 putative transporter; Provisional
Probab=100.00 E-value=1.8e-33 Score=275.05 Aligned_cols=377 Identities=15% Similarity=0.131 Sum_probs=278.7
Q ss_pred hhHHHHHHHHHHHhhhchhchHhHHHHHHHHhcccccchhhhhhhHHHHHHHHHHHHHHhhhhhhhhhhcCCchhhHHHH
Q 011783 40 ITELFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGT 119 (477)
Q Consensus 40 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~Grr~~~~~~~ 119 (477)
++.++.++++.++..++.+.+.+.+|.+.+++|.+..+ .+++.+.+.++..++.+++|+++||+|||++++.+.
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~s~~~------~~~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~ 82 (471)
T PRK10504 9 RWQLWIVAFGFFMQSLDTTIVNTALPSMAQSLGESPLH------MHMVIVSYVLTVAVMLPASGWLADRVGVRNIFFTAI 82 (471)
T ss_pred HHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHhCcCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHH
Confidence 45677788888999999999999999999999999999 999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhhhHHHHHHHHHHhhhcccchhhH-HHHhhhhccccchhhHHHHHHHHhHHHHHHHHhHHHHhhhccc
Q 011783 120 ASVVIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAE 198 (477)
Q Consensus 120 ~~~~i~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~ 198 (477)
++.+++.++++++++++.+++.|+++|++.+...|. .+++.|++|+++|++++++.....++|..+||.+++.+.+
T Consensus 83 ~~~~~~~~~~~~~~~~~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~g~l~~--- 159 (471)
T PRK10504 83 VLFTLGSLFCALSGTLNELLLARVLQGVGGAMMVPVGRLTVMKIVPREQYMAAMTFVTLPGQVGPLLGPALGGLLVE--- 159 (471)
T ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHHhhhHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHh---
Confidence 999999999999999999999999999999998887 9999999999999999999999999999999999999988
Q ss_pred cCCcccccccccc-cccchHHHHHHHHHhhccccccCCCCCCccchhhh---------hhhhhhc---------------
Q 011783 199 KYPNLFSSESLFG-KFPYFLPCLCISLFAFGETLHRHNDDDDSCDVSYD---------ALESASA--------------- 253 (477)
Q Consensus 199 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~---------~~~~~~~--------------- 253 (477)
.++|++.|. ..++.....+......|+.+.... +.+....... ..++...
T Consensus 160 ----~~gw~~~f~~~~~~~~l~~~~~~~~~~~~~~~~~-r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (471)
T PRK10504 160 ----YASWHWIFLINIPVGIIGAIATLMLMPNYTMQTR-RFDLSGFLLLAVGMATLTLALDGSKGLGLSPLAIAGLVAVG 234 (471)
T ss_pred ----hccHHHHHHHHHHHHHHHHHHHHHhCCCccccCC-CCChHHHHHHHHHHHHHHHHHhcCCcCCcchHHHHHHHHHH
Confidence 344555442 111112222222223333221111 1110000000 0000000
Q ss_pred -------cchhhcccCCchhhhhhcchhhHHHHHHHHHHHhhhhhhHHHHHHhhcCcccCCccccchhhhHHHHHHHHHH
Q 011783 254 -------EVKEEEGREATPKKSLLKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFS 326 (477)
Q Consensus 254 -------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~ 326 (477)
..++++.+.+....+++|||++...+...++..........+.|.|.+.. .|.++.+.++......++
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~-----~g~~~~~~g~~~~~~~~~ 309 (471)
T PRK10504 235 VVALLLYLLHARNNNRALFSLKLFRTRTFSLGLAGSFAGRIGSGMLPFMTPVFLQIG-----LGFSPFHAGLMMIPMVLG 309 (471)
T ss_pred HHHHHHHHHHHhcCCCCccCHHHhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----cCCCHHHHHHHHHHHHHH
Confidence 00011111222234588999998887777777666666666777777643 788999999999888888
Q ss_pred HHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhhhhHHHHhHHHHHHhhcCCcc
Q 011783 327 LLVFQLSLYPFLERILGPIMVARIAGVLTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVDQD 406 (477)
Q Consensus 327 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 406 (477)
..++.. +.+++.||+++|+.+..+..+..+....+.+..... ..+ .......+.+++.+...+....+..+.+|++
T Consensus 310 ~~~~~~-~~~~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~-~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 385 (471)
T PRK10504 310 SMGMKR-IVVQVVNRFGYRRVLVATTLGLALVSLLFMLVALLG--WYY-LLPFVLFLQGMVNSTRFSSMNTLTLKDLPDN 385 (471)
T ss_pred HHHHHH-HHHHHHHHcCchHHHHHHHHHHHHHHHHHHhccccc--cHH-HHHHHHHHHHHHHHHHHHHHHHHHHHcCCHH
Confidence 887777 889999999999999888887776655554432211 111 1122233334555666777778888889999
Q ss_pred hhhHHhHHHHHHHHHHHHHhhhHHHHHHHHhhh
Q 011783 407 QRGAANGIAMTGMSLFKAAGPAGGGALFSWAQK 439 (477)
Q Consensus 407 ~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~ 439 (477)
.+++++|+.++...+|..+|+.+.|.+.+..+.
T Consensus 386 ~~g~~~~~~~~~~~~g~~ig~~i~g~ll~~~g~ 418 (471)
T PRK10504 386 LASSGNSLLSMIMQLSMSIGVTIAGLLLGLFGQ 418 (471)
T ss_pred hccchHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 999999999999999999999999999988743
No 28
>PRK12382 putative transporter; Provisional
Probab=100.00 E-value=2.2e-33 Score=267.84 Aligned_cols=364 Identities=17% Similarity=0.158 Sum_probs=259.5
Q ss_pred hhHHHHHHHHHHHhhhchhchHhHHHH-HHHHhcccccchhhhhhhHHHHHHHHHHHHHHhhhhhhhhhhcCCchhhHHH
Q 011783 40 ITELFSIWIIVLCTALPISSLFPFLYF-MIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMG 118 (477)
Q Consensus 40 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~s~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~Grr~~~~~~ 118 (477)
++.++.+.++.++..+..++..|.+|. +.+|+|.+..+ .|++.+++.+++.++++++|+++||+||||++..+
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~p~l~~~l~~~lg~s~~~------~g~~~s~~~~~~~i~~~~~G~l~Dr~g~r~~l~~~ 87 (392)
T PRK12382 14 NFSLFRIAFAVFLTYMTVGLPLPVIPLFVHHDLGFGNTM------VGIAVGIQFLATVLTRGYAGRLADQYGAKRSALQG 87 (392)
T ss_pred cccHHHHHHHHHHHHHHHHHHhhhhhHHHHHhcCCcHHH------HHHHHHHHHHHHHHHhhhhhHHHHhhcchHHHHHH
Confidence 355667777888888888999999995 67899999999 99999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHh--------hhhHHHHHHHHHHhhhcccchhhH-HHHhhhhccccchhhHHHHHHHHhHHHHHHHHhH
Q 011783 119 TASVVIFNTLFGL--------SVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPAL 189 (477)
Q Consensus 119 ~~~~~i~~~~~~~--------~~~~~~l~~~r~l~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~ 189 (477)
.+...++.+.+.. .++++.+++.|+++|++.+...+. .+++.|++|+|+|++++++.+.+...|..+||++
T Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~a~~~~~~~~~~g~~~g~~~ 167 (392)
T PRK12382 88 MLACGLAGLAYLLAAILPVSAPFKFALLVVGRLILGFGESQLLTGALTWGLGLVGPKHSGKVMSWNGMAMYGALAAGAPL 167 (392)
T ss_pred HHHHHHHHHHHHhhhccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCccccchhhhHHHHHHHHHHHHHHHH
Confidence 8887776543321 358899999999999999888787 8899999999999999999999999999999999
Q ss_pred HHHhhhccccCCcccccccccccccchHHHHHHHHHhhccccccCCCCCCccchhhhhhhhhhccchhhcccCCchhhhh
Q 011783 190 GGFLAQPAEKYPNLFSSESLFGKFPYFLPCLCISLFAFGETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKSL 269 (477)
Q Consensus 190 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (477)
++.+.+ .++|+..+. ......+......++.++.++ ++.+ + .+.++.
T Consensus 168 ~~~l~~-------~~g~~~~~~---~~~~~~~~~~~~~~~~~~~~~---~~~~----------------~----~~~~~~ 214 (392)
T PRK12382 168 GLLLHS-------HFGFAALAL---TTMVLPLLAWAFNGTVRKVPA---HAGE----------------R----PSLWSV 214 (392)
T ss_pred HHHHHh-------ccChHHHHH---HHHHHHHHHHHHHHhccCCCC---Cccc----------------C----chHHHH
Confidence 999887 345554431 001111112222222211110 0000 0 011111
Q ss_pred hcchhhHHHHHHHHHHHhhhhhhHHHHHHhhcCcccCCccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHH
Q 011783 270 LKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVAR 349 (477)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 349 (477)
.| .++.......+..........+.+.|..+ .+++ +.+......+++.+++++ ..+++.||+++|+.+.
T Consensus 215 ~~--~~~~~~~~~~l~~~~~~~~~~~~~~~~~~------~~~~--~~~~~~~~~~~~~~~~~~-~~g~l~~r~g~~~~~~ 283 (392)
T PRK12382 215 VG--LIWKPGLGLALQGVGFAVIGTFVSLYFAS------KGWA--MAGFTLTAFGGAFVLMRV-LFGWMPDRFGGVKVAI 283 (392)
T ss_pred HH--HHHHhHHHHHHHHHHHhHHHHHHHHHHHh------cCCc--hhHHHHHHHHHHHHHHHH-HHHHHHHhcCCCeehH
Confidence 11 11111111222222233344455555543 3443 345566667777778877 8899999999999988
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhhhhHHHHhHHHHHHhhcCCcchhhHHhHHHHHHHHHHHHHhhhH
Q 011783 350 IAGVLTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIAMTGMSLFKAAGPAG 429 (477)
Q Consensus 350 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~ 429 (477)
.+..+..++...+....+ . + .......+.+++.+...+.......+..|+++||++.|+.+....+|..++|.+
T Consensus 284 ~~~~~~~~~~~~~~~~~~---~--~-~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~ 357 (392)
T PRK12382 284 VSLLVETVGLLLLWLAPT---A--W-VALAGAALTGAGCSLIFPALGVEVVKRVPSQVRGTALGGYAAFQDIAYGVSGPL 357 (392)
T ss_pred HHHHHHHHHHHHHHHccc---H--H-HHHHHHHHHHHHHHhHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 888777776655444321 1 1 222233444555566677777788888999999999999999999999999999
Q ss_pred HHHHHHHhhhhccccCCCCchHHHHHHHHHHHHHHHHHhh
Q 011783 430 GGALFSWAQKRLDASFLPGSQMVFFVLNVVEAIGVLMTFK 469 (477)
Q Consensus 430 ~g~l~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 469 (477)
.|.+.++. ||+..|.+.+++.+++.+..+.
T Consensus 358 ~g~l~~~~----------g~~~~~~~~~~~~~~~~~~~~~ 387 (392)
T PRK12382 358 AGMLATSF----------GYPSVFLAGAISAVLGIIVTIL 387 (392)
T ss_pred HHHHHHHh----------CchHHHHHHHHHHHHHHHHHHh
Confidence 99999988 8999999999888888776654
No 29
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=100.00 E-value=8.2e-34 Score=279.04 Aligned_cols=375 Identities=12% Similarity=0.143 Sum_probs=281.9
Q ss_pred HHHHHHHHHHHhhhchhchHhHHHHHHHHhcccccchhhhhhhHHHHHHHHHHHHHHhhhhhhhhhhcCCchhhHHHHHH
Q 011783 42 ELFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTAS 121 (477)
Q Consensus 42 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~Grr~~~~~~~~~ 121 (477)
.+..+.++.++..++.....+.+|.+.+++|.+.++ .+++.+.+.++..++.++.|+++||+|||++++.+.++
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~s~~~------~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~ 76 (485)
T TIGR00711 3 LTIVLMLGTFMAVLDSTIVNVAIPTIAGDLGSSLSQ------VQWVITSYMLANAISIPLTGWLAKRFGTRRLFLISTFA 76 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhh------hhHHHHHHHHHHHHHHHhHHHHHHHhCcHHHHHHHHHH
Confidence 456677888999999999999999999999999999 99999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhhhHHHHHHHHHHhhhcccchhhH-HHHhhhhccccchhhHHHHHHHHhHHHHHHHHhHHHHhhhccccC
Q 011783 122 VVIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKY 200 (477)
Q Consensus 122 ~~i~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~ 200 (477)
..++.+++++++|++.+++.|+++|++.+...+. .+++.|++|+++|+++++++.....+|..+||.+++++.+ ..+|
T Consensus 77 ~~~~~~~~~~~~~~~~l~~~~~~~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~-~~~w 155 (485)
T TIGR00711 77 FTLGSLLCGVAPNLELMIIFRVIQGFGGGPLIPLSFSTLLNIYPPEKRGRAMAIWGLTVLVAPALGPTLGGWIIE-NYHW 155 (485)
T ss_pred HHHHHHHHhCcCCHHHHHHHHHHHHhhhhhHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHhhhhhccHhHhcc-CcCc
Confidence 9999999999999999999999999999988887 9999999999999999999999999999999999999987 2344
Q ss_pred CcccccccccccccchHHHHHHHHHhhccccccCCCCCCccchh-------------hhhhhhhhccc------------
Q 011783 201 PNLFSSESLFGKFPYFLPCLCISLFAFGETLHRHNDDDDSCDVS-------------YDALESASAEV------------ 255 (477)
Q Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~------------ 255 (477)
|+.|..... ..+...+...+.+||.++..+++.+..... .+..+..+.+.
T Consensus 156 ~~~f~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~d~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (485)
T TIGR00711 156 RWIFLINVP-----IGIIVVVVAFFILPRDKPAASENFDFLGLLLLSVGLGSLLYGLSEGPERGWFDSNEILILSITGLV 230 (485)
T ss_pred eehhhhhhH-----HHHHHHHHHHHHcCCccccccCCCcHHHHHHHHHHHHHHHHHHhhCCCCCCCCchHHHHHHHHHHH
Confidence 444432211 122223333344555332211111100000 00000000000
Q ss_pred -------hhhcccCCchhhhhhcchhhHHHHHHHHHHHhhhhhhHHHHHHhhcCcccCCccccchhhhHHHHHHHHHHHH
Q 011783 256 -------KEEEGREATPKKSLLKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLL 328 (477)
Q Consensus 256 -------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~ 328 (477)
.+.+.+++....+++++++++...+..++..........+.|.|.++. +|+++.+.+.......++.+
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~-----~g~s~~~~g~~~~~~~~~~~ 305 (485)
T TIGR00711 231 AIIAFVVWELTDDNPLVDLRLFKYRNFTIGCVYMSLLGLGLYGSFYLLPLYLQQV-----LGYTALQAGLHILPVGLAPM 305 (485)
T ss_pred HHHHHHHHHHcCCCCccCHHHHcCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHh-----cCCCHHHHHHHHHHHHHHHH
Confidence 011222233345678899988887777777777777777888887754 78999999999999999999
Q ss_pred HHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhhhhHHHHhHHHHHHhhcCCcchh
Q 011783 329 VFQLSLYPFLERILGPIMVARIAGVLTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVDQDQR 408 (477)
Q Consensus 329 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 408 (477)
++.+ +.+++.||+++|+.+..+..+..++...+.+...... ..+ .......+.+++.+...+.......+..|++++
T Consensus 306 ~~~~-~~g~l~~r~~~~~~~~~g~~~~~~~~~~~~~~~~~~~-~~~-~~~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~ 382 (485)
T TIGR00711 306 LSSP-IAGRMGDKIDPRKLVTIGLILYAVGFYWRAFTFTPDT-PFL-AIALPQFIRGFGMGCFFMPLTTIALSGLPPHKI 382 (485)
T ss_pred HHHH-HHHHHHhhcCcHHHHHHHHHHHHHHHHHHhccCCCCC-CHH-HHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHH
Confidence 9988 8899999999999988888777777665542111111 111 222223444556666666666677778999999
Q ss_pred hHHhHHHHHHHHHHHHHhhhHHHHHHHH
Q 011783 409 GAANGIAMTGMSLFKAAGPAGGGALFSW 436 (477)
Q Consensus 409 g~~~g~~~~~~~~g~~~~~~~~g~l~~~ 436 (477)
+++.|+.+..+.+|+.+|+.+.|.+.++
T Consensus 383 g~~~~~~~~~~~~g~~ig~~i~g~~~~~ 410 (485)
T TIGR00711 383 ARGSSLSNFTRQLGGSIGTALITTILTN 410 (485)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999874
No 30
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=100.00 E-value=3.6e-34 Score=276.55 Aligned_cols=403 Identities=13% Similarity=0.026 Sum_probs=267.9
Q ss_pred hhHHHHHHHHHHHhhhchhchHhHHHHHHHHhcccccchhhhhhhHHHHHHHHHHHHHHhhhhhhhhhhcCCchhhHHHH
Q 011783 40 ITELFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGT 119 (477)
Q Consensus 40 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~Grr~~~~~~~ 119 (477)
++.++...+.....+.+........|.+.+ +|.++++ .+++.+++.++..+++++.|+++||+|||+++..+.
T Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~-~g~s~~~------~g~~~~~~~~~~~~~~~~~G~l~dr~g~~~~~~~~~ 98 (438)
T TIGR00712 26 WQVFLGIFFGYAAYYLVRKNFALAMPYLVE-QGFSKGE------LGFALSAISIAYGFSKFIMGSVSDRSNPRVFLPAGL 98 (438)
T ss_pred HHHHHHHHHHHHHHHHHhccHHhhhHHHHH-cCCCHhH------hHHHHHHHHHHHHHhhhccchhhhccCCceehHHHH
Confidence 444555556666666777777777787775 5999999 999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhh----hhHHHHHHHHHHhhhcccchhhH-HHHhhhhccccchhhHHHHHHHHhHHHHHHHHhHHHHhh
Q 011783 120 ASVVIFNTLFGLS----VNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLA 194 (477)
Q Consensus 120 ~~~~i~~~~~~~~----~~~~~l~~~r~l~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~ 194 (477)
++.+++.++.+.. ++++.+.+.|++.|++.|...+. ...+.|++|+++|++++++.+.+.++|..+++.+.+...
T Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~g~~~~~~l~~~~~ 178 (438)
T TIGR00712 99 ILSAAVMLLMGFVPWATSSIAIMFVLLFLNGWFQGMGWPPCGRTMVHWWSQSERGTIVSIWNCAHNIGGGIPPLLVLLGM 178 (438)
T ss_pred HHHHHHHHHHhccccccchHHHHHHHHHHHHHHhhcchHHHHHHHHHhcCcccchhHHHHHHHHHHhHhHHHHHHHHHHH
Confidence 9999998887764 46788889999999998887776 889999999999999999999999999999988877655
Q ss_pred hccccCCcccccccccccccc-hHHHHHHHHHhhccccccCCCCCCccchhhhhhhhhhccchhhcccCCc-hhhhhhcc
Q 011783 195 QPAEKYPNLFSSESLFGKFPY-FLPCLCISLFAFGETLHRHNDDDDSCDVSYDALESASAEVKEEEGREAT-PKKSLLKN 272 (477)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 272 (477)
... .+||..|..... .++..+...+.++|.++..+.++.+..+ ++..+...+..+++.+.+. ..+..+|+
T Consensus 179 ~~~------~~w~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (438)
T TIGR00712 179 AWF------NDWHAALYFPAICAIIVALFAFAMMRDTPQSCGLPPIEEYR--NDYPDDYNEKAEQELTAKEIFMQYVLPN 250 (438)
T ss_pred HHh------hhhHHHHHHHHHHHHHHHHHHHHhccCCHHhcCCCCchhcc--cccccccccccccccchHHHHHHHHccC
Confidence 432 344444421111 1222333444566654432111111000 0000000000000000011 12346788
Q ss_pred hhhHHHHHHHHHHHhhhhhhHHHHHHhhcCcccCCccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHH
Q 011783 273 WPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAG 352 (477)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 352 (477)
+.++...+..++..........+.|.|+.+. .|+++.+.++...+..+..+++.+ +.+++.||+++++....+.
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~-----~g~s~~~~~~~~~~~~~~~~ig~~-~~g~l~dr~~~~~~~~~~~ 324 (438)
T TIGR00712 251 KLLWYIAIANVFVYLLRYGVLDWSPTYLKEV-----KHFALDKSSWAYFLYEYAGIPGTL-LCGWMSDKVFKGNRGATGV 324 (438)
T ss_pred chHHHHHHHHHHHHHHHHHHHHhHHHHHHHc-----cCCChhhHHHHHHHHHHHHHHHHH-HHHHHHHHhccCcccHHHH
Confidence 8888877766666656567777888888754 688999999999999999999988 8999999986433222232
Q ss_pred HHHHHHHH-HHHHHHHhhhhhHHHHHHHHHHHHhhhhHHHHhHHHHHHhhcCCcchhhHHhHHHHHHHHHHH-HHhhhHH
Q 011783 353 VLTIPLLT-SYPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIAMTGMSLFK-AAGPAGG 430 (477)
Q Consensus 353 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~-~~~~~~~ 430 (477)
........ ...+...... ..+.. ....+..++...+..........+.+|++.||+++|+.+...++++ +++|.+.
T Consensus 325 ~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~gg~~~gp~l~ 402 (438)
T TIGR00712 325 FFMTLVTIAVIVYWMNPAG-NPLVD-MICMIVIGFLIYGPVMLIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIV 402 (438)
T ss_pred HHHHHHHHHHHHHHhcCCC-chHHH-HHHHHHHHHHHccHHHHHHHHHHHhcChhheeeehhhhchHHHhhhhhhcchhH
Confidence 22211111 1111111000 11111 1111111222122222223456788999999999999999888875 6899999
Q ss_pred HHHHHHhhhhccccCCCCchHHHHHHHHHHHHHHHHHhhhhhhccC
Q 011783 431 GALFSWAQKRLDASFLPGSQMVFFVLNVVEAIGVLMTFKPFLAQRH 476 (477)
Q Consensus 431 g~l~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 476 (477)
|.+.|+. ||+..|.+..++.+++.+..+. ..+|+|
T Consensus 403 G~l~~~~----------g~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 437 (438)
T TIGR00712 403 GYTVDFF----------GWDGGFMVMIGGSILAVILLIV-VMIGEK 437 (438)
T ss_pred HHHHHhc----------cchHHHHHHHHHHHHHHHHHHH-HHhhcc
Confidence 9999987 8889998888888787777666 455554
No 31
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=100.00 E-value=5e-33 Score=265.69 Aligned_cols=381 Identities=14% Similarity=0.148 Sum_probs=270.0
Q ss_pred hhHHHHHHHHHHHhhhchhchHhHHHHHHHHhcccccchhhhhhhHHHHHHHHHHHHHHhhhhhhhhhhcCCchhhHHHH
Q 011783 40 ITELFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGT 119 (477)
Q Consensus 40 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~Grr~~~~~~~ 119 (477)
+|.+...+++.++..+..+...+.++.+.+|+|.++.+ .|++.+.+.+++.+++++.|+++||+|||+++..+.
T Consensus 12 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~s~~~------~g~~~~~~~~~~~i~~~~~g~l~dr~g~k~~l~~~~ 85 (402)
T TIGR00897 12 PLNLLWGYIGVVVFMTGDGLEQGWLSPFLKALGLSPQQ------SASAFTLYGIAAAISAWISGVVAEIIGPLKTMMIGL 85 (402)
T ss_pred CchhhHHHHHHHHHHHhhhhHHHhHHHHHHHhCCCHHH------hHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHH
Confidence 45677778888888888777778888888999999999 999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHH---h-hhhHHHHHHHHHHhhhcccchhhH-HHHhhhhccccchhhHHHHHHHHhHHHH-HHHHhHHHHh
Q 011783 120 ASVVIFNTLFG---L-SVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGL-IIGPALGGFL 193 (477)
Q Consensus 120 ~~~~i~~~~~~---~-~~~~~~l~~~r~l~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~-~~g~~~~~~l 193 (477)
++.+++.+++. . .++++.+++.|++.|++.+...+. .+.+.+++|+++|++++|+.+.+.++|. .++|++++.+
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~i~G~g~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~g~~~~~~l 165 (402)
T TIGR00897 86 LLWCVGHAAFIVFGLGHANYPLILLFYGIRGLGYPLFAYSFLVWVVYNTKQDNLSSAVGWFWAVYSIGIGVFGSYYSSYA 165 (402)
T ss_pred HHHHHHHHHHHHHhccCccHHHHHHHHHHHHcchHHHHhHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 99998876553 3 357889999999999998877666 8888999999999999999999999997 6899999888
Q ss_pred hhccccCCcccccccccccccchHHHHHHHHHhhccccccCCCCCCccchhhhhhhhhhccchhhcccCCchhhhhhcch
Q 011783 194 AQPAEKYPNLFSSESLFGKFPYFLPCLCISLFAFGETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKSLLKNW 273 (477)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 273 (477)
.+. .+|+.. .|+..+ +.....++..+..++.+++++ +++++ + ..+.....+.++|+|
T Consensus 166 ~~~-~g~~~~-~~~~~~----~~~~~~~~~~~~~~~~~~~~~--~~~~~----~-----------~~~~~~~~~~~~~~~ 222 (402)
T TIGR00897 166 IPA-FGEMNT-LWSALA----FVLTGGVIALFSNKDIFTPQH--MQTRE----K-----------FSELGKAATILFTNP 222 (402)
T ss_pred ccc-cchHHH-HHHHHH----HHHHHHHHHHhccCCCCCccc--ccCCc----c-----------hhhHHHHHHHHHcCh
Confidence 762 222211 133222 111111222222222211110 00000 0 011112456788999
Q ss_pred hhHHHHHHHHHHHhhhhhhHHHHHHhhcCcccCCccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHH-HHH
Q 011783 274 PLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVAR-IAG 352 (477)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~-~~~ 352 (477)
+++...+..++..........+.|.|..+ +|+++.+.+.......++..++.. ..+++.||++||+... .+.
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~------~g~s~~~~~~~~~~~~~~~~ig~~-~~g~l~dr~~~~~~~~~~~~ 295 (402)
T TIGR00897 223 NVLLGGMVRIINTIGLFGFAVFLPMFVAE------LGFSTSEWLQIWGTFFFTNIVFNV-IFGIVGDKLGWMNTVRWFGG 295 (402)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHH------cCCChhHHHHHHHHHHHHHHHHHH-HHHHHHHhhcchhHHHHHHH
Confidence 99887777777666666777788877653 788999999988888999999998 8899999999887664 223
Q ss_pred HHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhhhhHHHHhHHHHHHhhcCCcchhhHHhHHHHHHHHHHHHHhhhHHHH
Q 011783 353 VLTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIAMTGMSLFKAAGPAGGGA 432 (477)
Q Consensus 353 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~ 432 (477)
....+....+...........+ ......++.+++.....+. .....+. ++++||++.|+.+....+++.++|.+.|.
T Consensus 296 l~~~~~~~~l~~~~~~~~~~~~-~~~~~~~~~G~~~~~~~~~-~~~~~~~-~~~~~g~~~g~~~~~~~lg~~~gp~i~g~ 372 (402)
T TIGR00897 296 VGCGIFTLALYYIPQHFGHSFA-VALIIAIALGIFLAGYVPL-AAVFPTL-APKHKGAAMSVLNLSAGLSAFLAPAIAVL 372 (402)
T ss_pred HHHHHHHHHHHHHHHccCCcHH-HHHHHHHHHHHHHHHHHHH-HHHHHhh-CcchhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3333332222222211111111 1222233334444444443 4455664 55789999999999999999999999999
Q ss_pred HHHHhhhhccccCCCCchHHHHHHHHHHHHHHHHHhh
Q 011783 433 LFSWAQKRLDASFLPGSQMVFFVLNVVEAIGVLMTFK 469 (477)
Q Consensus 433 l~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 469 (477)
+.+.. |+...+++.+++.+++.+...+
T Consensus 373 l~~~~----------g~~~~~~~~a~~~~i~~~~~~~ 399 (402)
T TIGR00897 373 FIGFF----------GAIGVVWIFAALYVVSAFLTAF 399 (402)
T ss_pred HHhhc----------chHHHHHHHHHHHHHHHHHHHH
Confidence 99987 8888999999888888777665
No 32
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=100.00 E-value=3.3e-33 Score=262.42 Aligned_cols=391 Identities=12% Similarity=0.042 Sum_probs=274.1
Q ss_pred CCCchhHHHHHHHHHHHhhhchhchHhHHHHHHH-HhcccccchhhhhhhHHHHHHHHHHHHHHhhhhhhhhhhcCCchh
Q 011783 36 SGLPITELFSIWIIVLCTALPISSLFPFLYFMIK-DFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPV 114 (477)
Q Consensus 36 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~s~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~Grr~~ 114 (477)
++..+|.+...+++.++.+....+.+++.+.+.+ |+|+|.+| .+++.+++.+++.+++++.|++.||+|.|++
T Consensus 29 ~~~a~r~l~~s~~~f~~~F~~w~~~~~l~~~~~~~~~~ls~~q------~g~l~ai~~l~~al~rip~G~l~Dr~G~R~v 102 (462)
T PRK15034 29 KHIARRNLWISVSCLLLAFCVWMLFSAVTVNLNKIGFNFTTDQ------LFLLTALPSVSGALLRVPYSFMVPIFGGRRW 102 (462)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHhCChHH
Confidence 4445678888899999999999999999998876 89999999 9999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHhh-----hhHHHHHHHHHHhhhcccchhhHHHHhhhhccccchhhHHHHHHHHhHHHHHHHHhH
Q 011783 115 IIMGTASVVIFNTLFGLS-----VNFWMAVLTRFLLGSLNGLLGPIKAYACEIFREEHQALGLSTVSTAWGIGLIIGPAL 189 (477)
Q Consensus 115 ~~~~~~~~~i~~~~~~~~-----~~~~~l~~~r~l~G~~~g~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~ 189 (477)
+.++.++.++.++..+++ ++++.+++.|++.|++.+.+.+....+++++|+++||+++|+.....++|..+++++
T Consensus 103 ~~~~~ll~~i~~~~~~~a~~~~~~s~~~lli~r~l~Gigg~~f~~~~~~vs~wfp~~~rG~A~Gi~~g~G~~G~~l~~~l 182 (462)
T PRK15034 103 TVFSTAILIIPCVWLGIAVQNPNTPFGIFIVIALLCGFAGANFASSMGNISFFFPKAKQGSALGINGGLGNLGVSVMQLV 182 (462)
T ss_pred HHHHHHHHHHHHHHHHHHHcccCCCHHHHHHHHHHHHHHHHhHHHHHHHHHHHCCHhHhHHHHHHHHHHHhhHHHHHHHH
Confidence 999999999999999987 899999999999999844444449999999999999999999987777787776666
Q ss_pred HHHhhh----ccccCCc-------ccccccccccccchH-HHHHHHHHhhccccccCCCCCCccchhhhhhhhhhccchh
Q 011783 190 GGFLAQ----PAEKYPN-------LFSSESLFGKFPYFL-PCLCISLFAFGETLHRHNDDDDSCDVSYDALESASAEVKE 257 (477)
Q Consensus 190 ~~~l~~----~~~~~~~-------~~~~~~~~~~~~~~~-~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (477)
...+.. ...+|.. ..+|+.+...+.... +..++..+.+++.+. + +
T Consensus 183 ~p~~i~~~l~~~~G~~~~~~~~g~~~~~~~~~~~~~~~~iv~~i~~~~~~~~~~~----~--~----------------- 239 (462)
T PRK15034 183 APLVIFVPVFAFLGVNGVPQADGSVMSLANAAWIWVPLLAIATIAAWSGMNDIAS----S--R----------------- 239 (462)
T ss_pred HHHHHHHHHHHHhccccccccccchHHHHHHHHHHHHHHHHHHHHHHHhCCCccc----c--c-----------------
Confidence 655431 1112221 223444331111111 111122222111110 0 0
Q ss_pred hcccCCchhhhhhcchhhHHHHHHHHHHHhhhhhhHHHHHHhhcCcccCCccccchhhhHHHHHHHHHHHHHHHHHHHHH
Q 011783 258 EEGREATPKKSLLKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPF 337 (477)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~ 337 (477)
......++.+|+|..|...+.+++.+..+.++..++|.|..+. + +.........+..+...+.++ ++|+
T Consensus 240 ---~~~~~~~~vlk~~~~Wllslly~~tFG~fvg~s~~lp~~~~~~-----~--~~~~~l~~~~l~~l~~~l~rp-lgG~ 308 (462)
T PRK15034 240 ---ASIADQLPVLQRLHLWLLSLLYLATFGSFIGFSAGFAMLAKTQ-----F--PDVNILRLAFFGPFIGAIARS-VGGA 308 (462)
T ss_pred ---cCHHHHHHHhCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHH-----c--ChHHHHHHHHHHHHHHHHHHH-hhHH
Confidence 0112456789999999999999998888888888899887642 2 222222223334566777777 8999
Q ss_pred HHHhhcchhHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhhhhHHHHhHHHHHHhhcCCc------------
Q 011783 338 LERILGPIMVARIAGVLTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVDQ------------ 405 (477)
Q Consensus 338 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------ 405 (477)
++||+|+++.+..+.+...+........................+...++.+.-+...+-++.+.+|+
T Consensus 309 LADRiG~~~vl~~~~i~~~i~~~~~~l~lp~~~~~~~~~~~~~~~~l~~~~G~gngsvfk~ip~~f~~~~~~~~~~~~~~ 388 (462)
T PRK15034 309 ISDKFGGVRVTLINFIFMAIFSALLFLTLPGTGSGNFIAFYAVFMGLFLTAGLGSGSTFQMIAVIFRQITIYRVKMKGGS 388 (462)
T ss_pred HHHhcCchHHHHHHHHHHHHHHHHHHHHhccccccHHHHHHHHHHHHHHHhcccchHHHHhhHHHHhhhhhhcccccccc
Confidence 99999999999988876666653322222111001111112212222233333334444455555553
Q ss_pred ---------chhhHHhHHHHHHHHHHHHHhhhHHHHHHHHhhhhccccCCCCchHHHHHHHHHHHHHHHHHhhhhhhcc
Q 011783 406 ---------DQRGAANGIAMTGMSLFKAAGPAGGGALFSWAQKRLDASFLPGSQMVFFVLNVVEAIGVLMTFKPFLAQR 475 (477)
Q Consensus 406 ---------~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 475 (477)
++.|.+.|+....+.+|+++-|.+.|...+.+ +++...|+.+.+..+++.++.+..+.|+.
T Consensus 389 ~~~~~~~~~~~~g~v~G~v~a~G~~Ggf~~p~~~g~~~~~~---------g~~~~~~~~~~~~~~~~~~~~w~~y~r~~ 458 (462)
T PRK15034 389 DEQAQREAVTETAAALGFISAIGAVGGFFIPQAFGMSLNMT---------GSPVGAMKVFLIFYIVCVLLTWLVYGRRK 458 (462)
T ss_pred hhHHhhHHHHHHHHHHHHHHHHHHcccchhhHHHHHHHHHc---------CCcHHHHHHHHHHHHHHHHHHHHHhccCC
Confidence 26889999999999999999999999998877 25778899998888888888877555553
No 33
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=100.00 E-value=2.4e-33 Score=266.34 Aligned_cols=371 Identities=13% Similarity=0.052 Sum_probs=261.1
Q ss_pred HHHHHHHHHHHhhhchhchHhHHHHHHHHhcccccchhhhhhhHHHHHHHHHHHHHHhhhhhhhhhhcCCchhhHHHHHH
Q 011783 42 ELFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTAS 121 (477)
Q Consensus 42 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~Grr~~~~~~~~~ 121 (477)
.+..++.+.++..++..+.....+.+.+|++.++.+ .+++.+.+.+++.+.++++|+++||+|||++++++.++
T Consensus 4 ~f~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~------~~~~~~~~~l~~~l~~~~~G~laDr~grr~vl~~~~~~ 77 (393)
T PRK11195 4 GFYAIMAAQFFSALADNALLFAAIALLKELHYPDWS------QPLLQMFFVLAYIVLAPFVGAFADSFPKGRVMFIANGI 77 (393)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcHHH------HHHHHHHHHHHHHHHHhhhhHhhhccCCchhhHHHHHH
Confidence 456678888888887777777777788999999888 99999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhhhHHHHHHHHHHhhhcccchhhH-HHHhhhhccccchhhHHHHHHHHhHHHHHHHHhHHHHhhhccccC
Q 011783 122 VVIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKY 200 (477)
Q Consensus 122 ~~i~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~ 200 (477)
.+++.++++++++. ++.|+++|++.+...|+ .+++.|++|+++|++++++.+....+|.++||.++|++.+..
T Consensus 78 ~~~~~~~~~~~~~~---~~~r~l~G~~~a~~~pa~~a~i~~~~~~~~~~~a~~~~~~~~~~~~~~Gp~lgG~l~~~~--- 151 (393)
T PRK11195 78 KLLGCLLMLFGIHP---LLAYGLVGIGAAAYSPAKYGILTELLPGEKLVKANGWMEGSTIAAILLGTVLGGALADPH--- 151 (393)
T ss_pred HHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---
Confidence 99998888777664 78899999999999998 999999999999999999999999999999999999998831
Q ss_pred CcccccccccccccchHHHHHHHHHhhccccccCCCCCCccchhhhhhhhhhccchhhcccCCchhhhhhcchhhHHHHH
Q 011783 201 PNLFSSESLFGKFPYFLPCLCISLFAFGETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKSLLKNWPLMSSII 280 (477)
Q Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (477)
|+..+...........+....+||.+.++++++++.+.. . .+.....+.++++|.+.....
T Consensus 152 -----~~~~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~---~-----------~~~~~~~~~l~~~~~~~~~~~ 212 (393)
T PRK11195 152 -----AEAALAVCALIYLLAALFNLFIPRLGARRPGQSWNPIAL---L-----------RDFFHACRVLWRDKLGRFSLA 212 (393)
T ss_pred -----HHHHHHHHHHHHHHHHHHHhcCCCCcccccccCCCHHHH---H-----------HHHHHHHHHHHhCchhHHHHH
Confidence 322221111111111222344555432211111000000 0 000112456778887766555
Q ss_pred HHHHHHhhhhhhHHHHHHhhcCcccCCccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHH
Q 011783 281 VYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTIPLLT 360 (477)
Q Consensus 281 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 360 (477)
...+............+.|.++. +|.++.+.|......+++.++++. ..+++.||.++++....+.. ..+...
T Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~-----lg~s~~~~G~~~~~~~~g~i~g~~-~~~~l~~~~~~~~~~~~g~~-~~~~~~ 285 (393)
T PRK11195 213 GTTLFWGAGATLRFLVLAWAPVA-----LGITLNQPAYLQAVVAIGIAVGAG-AAARLVTLETVLRVLPAGIL-MGLVVL 285 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH-----cCCChhHHHHHHHHHHHHHHHHHH-HHHHHhcCCcccchHHHHHH-HHHHHH
Confidence 44444433444445556666544 788999999999999999999988 88899888888877766643 233222
Q ss_pred HHHHHHHhhhhhHHHHHHHHHHHHhhhhHHHHhHHHHHHhhcCCcch-hhHHhHHHHHHHHHHHHHhhhHHHHHHHHhhh
Q 011783 361 SYPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVDQDQ-RGAANGIAMTGMSLFKAAGPAGGGALFSWAQK 439 (477)
Q Consensus 361 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~ 439 (477)
.+.... + .+ ......++.+++.+...+...+..++..|++. +|++.++.+..++++..++..+.+.+ +..
T Consensus 286 ~~~~~~---~--~~-~~~~~~~~~G~~~g~~~~~~~~~~q~~~~~~~~~g~~~a~~~~~~~~~~~~~~~~~~~~-~~~-- 356 (393)
T PRK11195 286 LMALQH---S--LL-PAYPLLILIGALGGFFVVPMNALLQHRGHVLVGAGHSIAVQNFNENLAMLLMLGLYSLL-VKL-- 356 (393)
T ss_pred HHHHHh---H--HH-HHHHHHHHHHHhhhhhhhhHHHHHHhhCcccccchhHHHHHhHHHHHHHHHHHHHHHHH-HHc--
Confidence 222211 1 11 22233334455556666667777788666554 79999999999999999999998865 444
Q ss_pred hccccCCCCchHHHHHHHHHHHHHHHHH
Q 011783 440 RLDASFLPGSQMVFFVLNVVEAIGVLMT 467 (477)
Q Consensus 440 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 467 (477)
|.+..+++.+...+++..+.
T Consensus 357 --------~~~~~~~~~~~~~~~~~~~~ 376 (393)
T PRK11195 357 --------GVPVVAVIVGFGLLVALAMA 376 (393)
T ss_pred --------CCCHHHHHHHHHHHHHHHHH
Confidence 66666666555555554443
No 34
>PRK10489 enterobactin exporter EntS; Provisional
Probab=100.00 E-value=1.3e-33 Score=271.41 Aligned_cols=371 Identities=14% Similarity=0.052 Sum_probs=269.4
Q ss_pred HHHHHHHHHHhhhchhchHhHHHHHHHHhcccccchhhhhhhHHHHHHHHHHHHHHhhhhhhhhhhcCCchhhHHHHHHH
Q 011783 43 LFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASV 122 (477)
Q Consensus 43 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~Grr~~~~~~~~~~ 122 (477)
+..++...++..++.....+.+|.+.++++.++.+ .|++.+.+.+++.+++++.|+++||+|||+++..+.++.
T Consensus 19 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~------~g~~~~~~~l~~~~~~~~~G~l~dr~g~~~~l~~~~~~~ 92 (417)
T PRK10489 19 FRAVFIARFISIFGLGLLGVAVPVQIQMMTGSTLQ------VGLSVTLTGGAMFIGLMVGGVLADRYDRKKLILLARGTC 92 (417)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH------HHHHHHHHHHHHHHHHHhhHHHhhhcCCceEEEehHHHH
Confidence 44556667788888888899999999999999888 999999999999999999999999999999999998888
Q ss_pred HHHHHHHHh-----hhhHHHHHHHHHHhhhcccchhhH-HHHhhhhccccchhhHHHHHHHHhHHHHHHHHhHHHHhhhc
Q 011783 123 VIFNTLFGL-----SVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQP 196 (477)
Q Consensus 123 ~i~~~~~~~-----~~~~~~l~~~r~l~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~ 196 (477)
+++.+..+. .++++.+++.|++.|++.+...+. .+++.|++|+++|+++.++.+...++|..+||.+++.+.+
T Consensus 93 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~g~l~~- 171 (417)
T PRK10489 93 GLGFIGLALNAFLPEPSLLAIYLLGLWDGFFGSLGVTALLAATPALVGRENLMQAGAITMLTVRLGSVISPALGGLLIA- 171 (417)
T ss_pred HHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHhhhhhhccCHHHHHHHHHHHHHHHhHHHHhHHHHHHHHHH-
Confidence 777665542 567899999999999998887777 9999999999999999999999999999999999999987
Q ss_pred cccCCcccccccccccccchHHHHHHHHHhhccccccCCCCCCccchhhhhhhhhhccchhhcccCCchhhhhhcchhhH
Q 011783 197 AEKYPNLFSSESLFGKFPYFLPCLCISLFAFGETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKSLLKNWPLM 276 (477)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 276 (477)
..+|++.+...........+..+.+|+.+++++++ + +. .++.....+..+++|.++
T Consensus 172 ------~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~--~-~~---------------~~~~~~~~~~~~~~~~~~ 227 (417)
T PRK10489 172 ------AGGVAWNYGLAAAGTFITLLPLLRLPALPPPPQPR--E-HP---------------LRSLLAGFRFLLASPVVG 227 (417)
T ss_pred ------HHhhHHHHHHHHHHHHHHHHHHHhCCCCCCCCccc--c-cc---------------hHHHHHHHHHHHcChHHH
Confidence 23344333111111122222233444432211100 0 00 001112345567788776
Q ss_pred HHHHHHHHHHhhhhhhHHHHHHhhcCcccCCccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHH
Q 011783 277 SSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTI 356 (477)
Q Consensus 277 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 356 (477)
...+..++... ......+.|.|..+. +|.++.+.|.+.+...++.+++.. +.+++.||.++++.+..+..+..
T Consensus 228 ~~~~~~~~~~~-~~~~~~~~p~~~~~~-----~g~~~~~~g~~~~~~~~g~~ig~~-~~~~l~~~~~~~~~l~~~~~~~~ 300 (417)
T PRK10489 228 GIALLGGLLTM-ASAVRVLYPALADEV-----WQMGAAQIGLLYAAVPLGAALGAL-TSGWLAHSARPGLLMLLSTLGSF 300 (417)
T ss_pred HHHHHHHHHHH-HHhHHHhhHHHHHhc-----cCCChhHhHHHHHHHHHHHHHHHH-HHHHhhhccCcchHHHHHHHHHH
Confidence 65554443332 234555667666643 788899999999999999999988 88999998777777777776666
Q ss_pred HHHHHHHHHHHhhhhhHHHHHHHHHHHHhhhhHHHHhHHHHHHhhcCCcchhhHHhHHHHHHHHHHHHHhhhHHHHHHHH
Q 011783 357 PLLTSYPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIAMTGMSLFKAAGPAGGGALFSW 436 (477)
Q Consensus 357 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~ 436 (477)
++.+.+....+ +....+..++.+++.+...+...+++.+..|++.||+++|+.+...++|..+||.+.|.+.+.
T Consensus 301 ~~~~~~~~~~~------~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~g~~l~G~l~~~ 374 (417)
T PRK10489 301 LAVGLFGLMPM------WILAVLCLALFGYLSAISSLLQYTLLQTQTPDEMLGRINGLWTAQNVTGDAIGAALLGGLGAM 374 (417)
T ss_pred HHHHHHHccch------HHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHhhhHhHHHHHHHHHHHH
Confidence 66554433221 112233334445555555666778889999999999999999999999999999999999998
Q ss_pred hhhhccccCCCCchHHHHHHHHHHHHHHHHH
Q 011783 437 AQKRLDASFLPGSQMVFFVLNVVEAIGVLMT 467 (477)
Q Consensus 437 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 467 (477)
. |+...+...+++.++..++.
T Consensus 375 ~----------g~~~~~~~~~~~~~~~~~~~ 395 (417)
T PRK10489 375 M----------TPVASASASGFGLLIIGVLL 395 (417)
T ss_pred h----------chhhHHHHHHHHHHHHHHHH
Confidence 7 66677776665555544443
No 35
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=100.00 E-value=2.6e-33 Score=274.91 Aligned_cols=416 Identities=14% Similarity=0.053 Sum_probs=265.1
Q ss_pred chhHHHHHHHHHHHhhhchhchHhHHHHHHHHh--------cccccchhhhhhhHHHHHHHHHHHHHHhhhhhhhhhhcC
Q 011783 39 PITELFSIWIIVLCTALPISSLFPFLYFMIKDF--------QIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYG 110 (477)
Q Consensus 39 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~s~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~G 110 (477)
..+......++.+.+.++...+++..|.+.+++ +.++.+ .+++.+++.++..++++++|+++||+|
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~s~~~ig~~~~~~~~G~l~dr~G 83 (479)
T PRK10077 10 IFSITLVATLGGLLFGYDTAVISGTVESLNTVFVAPQNLSESAANSL------LGFCVASALIGCIIGGALGGYCSNRFG 83 (479)
T ss_pred HHHHHHHHHHHHHhcCcccceehHhHHHHHHHhcccccccccCChhH------HHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 345566777788889999999999999999988 667777 999999999999999999999999999
Q ss_pred CchhhHHHHHHHHHHHHHHHhh------------hhHHHHHHHHHHhhhcccchhhH-HHHhhhhccccchhhHHHHHHH
Q 011783 111 RKPVIIMGTASVVIFNTLFGLS------------VNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVST 177 (477)
Q Consensus 111 rr~~~~~~~~~~~i~~~~~~~~------------~~~~~l~~~r~l~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~ 177 (477)
||++++++.+++.++.++++++ ++++.+++.|+++|++.|...+. .++++|++|+++|++++++.+.
T Consensus 84 rr~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~i~e~~~~~~rg~~~~~~~~ 163 (479)
T PRK10077 84 RRDSLKIAAVLFFISALGSAWPEFGFTSIGPDNTGYVPEFVIYRIIGGIGVGLASMLSPMYIAEIAPAHIRGKLVSFNQF 163 (479)
T ss_pred cHHHHHHHHHHHHHHHHHHHhhccccccccccchhHHHHHHHHHHHHhhhHhHHhhHHHHHHHhhCChhhhhHHHHHHHH
Confidence 9999999999999998887763 33677899999999999998887 9999999999999999999999
Q ss_pred HhHHHHHHHHhHHHHhhhccc-cCCcccccccccccccchHHHHHHHHHhhccccccCCCCCCccch--hhhhhhhhhc-
Q 011783 178 AWGIGLIIGPALGGFLAQPAE-KYPNLFSSESLFGKFPYFLPCLCISLFAFGETLHRHNDDDDSCDV--SYDALESASA- 253 (477)
Q Consensus 178 ~~~~g~~~g~~~~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~--~~~~~~~~~~- 253 (477)
+..+|.++++.+++.+..... .+-..++||..|.......++..+..+.+||++++...++++++. ..++.....+
T Consensus 164 ~~~~G~~~~~~~~~~~~~~~~~~~~~~~gWr~~f~~~~~~~~~~~~~~~~l~~s~~~l~~~~~~~~~~~~~~~~~~~~~~ 243 (479)
T PRK10077 164 AIIFGQLVVYFVNYFIARSGDASWLNTDGWRYMFASEAIPALLFLMLLYFVPETPRYLMSRGKQEQAEGILRKIMGNTLA 243 (479)
T ss_pred HHHHHHHHHHHHHHHHhccCcccccccCChHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHcCCHHHHHHHHHHHcCChhH
Confidence 999999999888776653211 111134555555211112222333455678876542211111110 0000000000
Q ss_pred -----cchhhcccCCchhhhhhcchhhHHHHHHHHHHHhhh----hhhHHHHHHhhcCcccCCccccchhhhHHHHHHHH
Q 011783 254 -----EVKEEEGREATPKKSLLKNWPLMSSIIVYCVFSLHD----MAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITG 324 (477)
Q Consensus 254 -----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~ 324 (477)
+..+...++....+..+... ............+.. .....+.|.+.. ..|.+....+......+
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~p~i~~------~~g~~~~~~~~~~~~~~ 316 (479)
T PRK10077 244 TQALQEIKHSLDHGRKTGGKLLMFG-VGVIVIGVMLSVFQQFVGINVVLYYAPEIFK------TLGASTDIALLQTIIVG 316 (479)
T ss_pred HHHHHHHHHHHHHhhhhhhhhcchh-HHHHHHHHHHHHHHHHhChhHHHHHHHHHHH------HcCCCCchHHHHHHHHH
Confidence 00000000000000111100 000000000101110 111122233322 26777776777777778
Q ss_pred HHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhhhhHHHHhHHHHHHhhcCC
Q 011783 325 FSLLVFQLSLYPFLERILGPIMVARIAGVLTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVD 404 (477)
Q Consensus 325 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 404 (477)
+..+++.+ +.+++.||+|||+.+..+..+..++.+.+...........+.. ....+....+.....+..+.+++|.+|
T Consensus 317 ~~~~i~~~-~~g~l~dr~g~r~~~i~~~~~~~v~~~~l~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~e~~p 394 (479)
T PRK10077 317 VINLTFTV-LAIMTVDKFGRKPLQIIGALGMAIGMFSLGTAFYTQAPGIVAL-LSMLFYVAAFAMSWGPVCWVLLSEIFP 394 (479)
T ss_pred HHHHHHHH-HHHHHHHHhcChHHHHHhHHHHHHHHHHHHHHHhcCcccHHHH-HHHHHHHHHHhccccchhHHHhHhhCC
Confidence 88888887 8999999999999999999888887766654432211111111 111111112222234677889999999
Q ss_pred cchhhHHhHHHHHHHHHHHHHhhhHHHHHHHH--hhhhccccCCCCchHHHHHHHHHHHHHHHHHhhhhhhccC
Q 011783 405 QDQRGAANGIAMTGMSLFKAAGPAGGGALFSW--AQKRLDASFLPGSQMVFFVLNVVEAIGVLMTFKPFLAQRH 476 (477)
Q Consensus 405 ~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~--~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 476 (477)
+++|+++.|+.+....++.++++.+.+.+.+. ..+.. ++...|++.+++++++.++.+. ..||++
T Consensus 395 ~~~r~~~~g~~~~~~~~g~~~~~~~~p~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~-~~~e~~ 461 (479)
T PRK10077 395 NAIRGKALAIAVAAQWIANYFVSWTFPMMDKNSWLVAHF------HNGFSYWIYGCMGVLAALFMWK-FVPETK 461 (479)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHhHHHHhccchhhhc------cCccHHHHHHHHHHHHHHHHHh-ccccCC
Confidence 99999999999999999999998887755521 00111 6667888877777777666544 355543
No 36
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=100.00 E-value=2.1e-34 Score=274.18 Aligned_cols=365 Identities=15% Similarity=0.082 Sum_probs=256.6
Q ss_pred HHHHhhhchhchHhHHHHHHHHhcccccchhhhhhhHHHHHHHHHHHHHHhhhhhhhhhhcCCchhhHHHHHHHHHHHHH
Q 011783 49 IVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTL 128 (477)
Q Consensus 49 ~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~Grr~~~~~~~~~~~i~~~~ 128 (477)
..+..+++.....+..|.+.+++|.+..+ .|++.+++.++..+++++.|+++||+|||+++..+.++.+++.++
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~g~s~~~------~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~ 76 (379)
T TIGR00881 3 GYAAYYLVRKNFALAMPYLVEEIGLSKTD------LGLLLSSFSIAYGISKFVMGSVSDRSNPRVFLPIGLILCAIVNLF 76 (379)
T ss_pred hhhHHHHhHHhhhhhhHHHHHHhCCCHhH------HHHHHHHHHHHHHhhhhhhhHHHHhhCCeehhHHHHHHHHHHHHH
Confidence 45567778888899999999999999999 999999999999999999999999999999999999999999999
Q ss_pred HHhhhhHHHHHHHHHHhhhcccchhhH-HHHhhhhccccchhhHHHHHHHHhHHHHHHHH-hHHHHhhhccccCCccccc
Q 011783 129 FGLSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGP-ALGGFLAQPAEKYPNLFSS 206 (477)
Q Consensus 129 ~~~~~~~~~l~~~r~l~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~-~~~~~l~~~~~~~~~~~~~ 206 (477)
++++++++.+++.|++.|++.+...+. .+++.|++|+++|++++++.+.+..+|..++| .+++.+.+ ..+|
T Consensus 77 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~-------~~~~ 149 (379)
T TIGR00881 77 FGFSTSLWVMAALWALNGIFQGMGWPPCGRTVTKWFSRSERGTWVSFWNCSHNVGGGLLPPLVLFGIAE-------LYSW 149 (379)
T ss_pred HHHhhhHHHHHHHHHHHHhhccccCCchHHHHHHhcCHhhheeeEeehhccchhHHHHHHHHHHHHHHh-------cCCc
Confidence 999999999999999999999988887 99999999999999999999999999999999 46665554 2344
Q ss_pred ccccccccc-hHHHHHHHHHhhccccccCCCCCCccchhhhhhhhhhccchhhcccCCchhhhhhcchhhHHHHHHHHHH
Q 011783 207 ESLFGKFPY-FLPCLCISLFAFGETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKSLLKNWPLMSSIIVYCVF 285 (477)
Q Consensus 207 ~~~~~~~~~-~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (477)
+..+..... .....+...+..+|.++.++.++++.+.. ++.++..++.+++.++.+...++++++|.++...+..++.
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (379)
T TIGR00881 150 HWVFIVPGIIAIIVSLICFLLLRDSPQSCGLPPAEEMPN-EEPDGDAEKKEEELTKKQIFLQYVLLNKVLWYISLGYVFV 228 (379)
T ss_pred hhHHHHHHHHHHHHHHHHheeeCCCccccccCccccCcc-cccccccccccccccchHHHHHHHHhcchHHHHHHHHHHH
Confidence 443311111 11122223334444443222111111100 0000000001111112223456778899988887777777
Q ss_pred HhhhhhhHHHHHHhhcCcccCCccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcc-hhHHHHHHHH--HHHHHHHH
Q 011783 286 SLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGP-IMVARIAGVL--TIPLLTSY 362 (477)
Q Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~~~~--~~~~~~~~ 362 (477)
.........+.|.|..+. +|+++.+.+.......++.+++.+ +.+++.||..+ ++........ ..+.....
T Consensus 229 ~~~~~~~~~~~~~~~~~~-----~g~~~~~~~~~~~~~~~~~~~~~~-~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~ 302 (379)
T TIGR00881 229 YVVRTGILDWSPLYLTQE-----KGFSKEKASWAFTLYELGGLVGTL-LAGWLSDKLFNGRRGPLAVFFMALIIVSLLVY 302 (379)
T ss_pred HHHHHHHHHHHHHHHHHH-----hCCCHHHHHHHHHHHHHHcchhHH-HHHHHHHHHcCCcchHHHHHHHHHHHHHHHHH
Confidence 776677777888777644 788999999999999999999988 88999998643 3322211111 11111111
Q ss_pred HHHHHhhhhhHHHHHHHHHHHHhhhhHHHHhHHHHHHhhcCCcchhhHHhHHHHHHHHHHHHHhhhHHHHHHHHh
Q 011783 363 PYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIAMTGMSLFKAAGPAGGGALFSWA 437 (477)
Q Consensus 363 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~ 437 (477)
..... .+ .. ......+..+.......+....+..|.+|++.|+++.|+.+....+|..++|.+.|.+.++.
T Consensus 303 ~~~~~-~~--~~-~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~ 373 (379)
T TIGR00881 303 WLNPA-AN--PL-MDLICLFALGFLVYGPQMLIGVIASELAPKKAAGTAAGFVGFFAYLGGILAGLPLGYLADGF 373 (379)
T ss_pred hcCcc-hh--HH-HHHHHHHHHHHHHhhhhHHHHHHHHHhcCcchhHHHHHHHHHhhhhhhhhhhhhHHHHHHhh
Confidence 11101 11 11 12222232333444455555677889999999999999999999999999999999999987
No 37
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=100.00 E-value=5.9e-33 Score=266.81 Aligned_cols=382 Identities=21% Similarity=0.310 Sum_probs=270.1
Q ss_pred hhHHHHHHHHHHHhhhchhchHhHHHHHHHHhcccccchhhhhhhHHHHHHHHHHHHHHhhhhhhhhhhcCCchhhHHHH
Q 011783 40 ITELFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGT 119 (477)
Q Consensus 40 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~Grr~~~~~~~ 119 (477)
++....+++..++..+..+...+.+|.+.+++|.+..+.. ..+.|++.+++.++..++++++|+++||+|||+++..+.
T Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~ 91 (408)
T PRK09874 13 KRNLTVAWLGCFLTGAAFSLVMPFLPLYVEQLGVTGHSAL-NMWSGLVFSITFLFSAIASPFWGGLADRKGRKIMLLRSA 91 (408)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHhCCccchhH-HHHHHHHHHHHHHHHHHHHHHHHHHhhhhCcHHHHHHHH
Confidence 3456677888888899999999999999999998876510 112589999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhhhHHHHHHHHHHhhhcccchhhHHHHhhhhccccchhhHHHHHHHHhHHHHHHHHhHHHHhhhcccc
Q 011783 120 ASVVIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGPIKAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEK 199 (477)
Q Consensus 120 ~~~~i~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~ 199 (477)
+..+++.+++.++++++.+++.|++.|++.+...+...++.|++|+++|++++++......+|..++|.+++.+.+
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~---- 167 (408)
T PRK09874 92 LGMGIVMVLMGLAQNIWQFLILRALLGLLGGFVPNANALIATQVPRNKSGWALGTLSTGGVSGALLGPLAGGLLAD---- 167 (408)
T ss_pred HHHHHHHHHHHHHhhHHHHHHHHHHHHHhhhhHHhHHHHHHHhcCHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHH----
Confidence 9999999999999999999999999999866543338889999999999999999999999999999999999887
Q ss_pred CCcccccccccccccc-hHHHHHHHHHhhccccccCCCCCCccchhhhhhhhhhccchhhcccCCchhhhhhcchhhHHH
Q 011783 200 YPNLFSSESLFGKFPY-FLPCLCISLFAFGETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKSLLKNWPLMSS 278 (477)
Q Consensus 200 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 278 (477)
.++|+..+..... .+...+...+.++|.+++.++ ++.. +..+..+.+++++++..
T Consensus 168 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~-------------------~~~~~~~~~~~~~~~~~ 223 (408)
T PRK09874 168 ---SYGLRPVFFITASVLFLCFLVTLFCIRENFQPVSK--KEML-------------------HMREVVTSLKNPKLVLS 223 (408)
T ss_pred ---HhCHHHHHHHHHHHHHHHHHHHHHHhccCcccccc--hhhh-------------------HHHHHHHhCcCCchHHH
Confidence 3455554421111 111222222334443211110 0000 00112334566665443
Q ss_pred H-HHHHHHHhhhhhhHHHHHHhhcCcccCCccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHH
Q 011783 279 I-IVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTIP 357 (477)
Q Consensus 279 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 357 (477)
. ...............+++.|..+.. ...+......+.+....+++.+++.. ..+++.||+++|+.+..+..+..+
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~g~~~~~~~l~~~~~~~-~~g~l~dr~g~~~~~~~~~~~~~~ 300 (408)
T PRK09874 224 LFVTTLIIQVATGSIAPILTLYVRELA--GNVSNIAFISGMIASVPGVAALLSAP-RLGKLGDRIGPEKILITALIFSVL 300 (408)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHh--ccchHHHHHHHHHHHHHHHHHHHHHH-HHHHHHhccccchhHHHHHHHHHH
Confidence 2 2223333333344455555554320 00010112345566666777777777 789999999999998888776665
Q ss_pred HHHHHHHHHHhhhhhHHHHHHHHHHHHhhhhHHHHhHHHHHHhhcCCcchhhHHhHHHHHHHHHHHHHhhhHHHHHHHHh
Q 011783 358 LLTSYPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIAMTGMSLFKAAGPAGGGALFSWA 437 (477)
Q Consensus 358 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~ 437 (477)
..+....... .+ ...+..++.+++.+...+...+...+..|++.+|+.+++.+....+|..+||.++|.+.+..
T Consensus 301 ~~~~~~~~~~-----~~-~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~gp~~~G~l~~~~ 374 (408)
T PRK09874 301 LLIPMSFVQT-----PL-QLGILRFLLGAADGALLPAVQTLLVYNSSNQIAGRIFSYNQSFRDIGNVTGPLMGAAISANY 374 (408)
T ss_pred HHHHHHHhcc-----HH-HHHHHHHHHHhhhHhhHHHHHHHHHHhCCcccceeeehHHHHHHHHHHHhhHHHHHHHHhhc
Confidence 5554433321 11 22333344456667778888888888899999999999999999999999999999999887
Q ss_pred hhhccccCCCCchHHHHHHHHHHHHHHHHHhh
Q 011783 438 QKRLDASFLPGSQMVFFVLNVVEAIGVLMTFK 469 (477)
Q Consensus 438 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 469 (477)
||+..|++.+++.+++.+..++
T Consensus 375 ----------g~~~~f~~~~~~~l~~~~~~~~ 396 (408)
T PRK09874 375 ----------GFRAVFLVTAGVVLFNAVYSWN 396 (408)
T ss_pred ----------chhHHHHHHHHHHHHHHHHHHH
Confidence 8999999999888888777655
No 38
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=100.00 E-value=5.1e-33 Score=266.52 Aligned_cols=355 Identities=16% Similarity=0.125 Sum_probs=260.6
Q ss_pred HHHHHHHHHHhhhchhchHhHHHHHHHHhcccccchhhhhhhHHHHHHHHHHHHHHhhhhhhhhhhcCCchhhHHHHHHH
Q 011783 43 LFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASV 122 (477)
Q Consensus 43 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~Grr~~~~~~~~~~ 122 (477)
...+.+..++..++...+.|.+|.+.+++|.+..+ .++..+.+.+++.+++++.|+++||+|||+++..+.++.
T Consensus 15 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~~~------~~~~~~~~~~~~~~~~~~~G~l~dr~g~r~~l~~~~~~~ 88 (406)
T PRK15402 15 PLCLVLFEFATYIANDMIQPGMLAVVEDFNAGAEW------VPTSMTAYLAGGMFLQWLLGPLSDRIGRRPVMLAGVAFF 88 (406)
T ss_pred HHHHHHHHHHHHhhhhhHhcchHHHHHHhCCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHH
Confidence 33556666777778889999999999999999999 999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhhhHHHHHHHHHHhhhcccchhhH-HHHhhhhccccchhhHHHHHHHHhHHHHHHHHhHHHHhhhccccCC
Q 011783 123 VIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYP 201 (477)
Q Consensus 123 ~i~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~ 201 (477)
+++.+.+.++++++.+++.|+++|++.+...+. .+++.|.+|+++|.+.+++......+|..+||.+++.+.+
T Consensus 89 ~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~------ 162 (406)
T PRK15402 89 ILTCLAILLAQSIEQFTLLRFLQGIGLCFIGAVGYAAIQESFEEADAIKITALMANVALLAPLLGPLVGAALIH------ 162 (406)
T ss_pred HHHHHHHHHHccHHHHHHHHHHHHhHhhhHHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH------
Confidence 999999999999999999999999998887777 8999999999999999999988889999999999999887
Q ss_pred cccccccccccccch-HHHHHHHHHhhccccccCCCCCCccchhhhhhhhhhccchhhcccCCchhhhhhcchhhHHHHH
Q 011783 202 NLFSSESLFGKFPYF-LPCLCISLFAFGETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKSLLKNWPLMSSII 280 (477)
Q Consensus 202 ~~~~~~~~~~~~~~~-~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (477)
.++|+..+...... +...+......||++++.+++ .+ ..+.....++++++|.++...+
T Consensus 163 -~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~----------------~~~~~~~~~~~~~~~~~~~~~~ 222 (406)
T PRK15402 163 -VLPWRGMFVLFAALAALSFFGLWRAMPETAGRVGEK---LS----------------LKELGRDYKLVLKNRRFVAGAL 222 (406)
T ss_pred -ccCccHHHHHHHHHHHHHHHHHHHhCCCCCcccccc---cc----------------HHHHHHHHHHHHcCcHHHHHHH
Confidence 33444444111111 111111222334432211100 00 0011224567888998887776
Q ss_pred HHHHHHhhhhhhHHHHHHhhcCcccCCccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHH
Q 011783 281 VYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTIPLLT 360 (477)
Q Consensus 281 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 360 (477)
..++.......+....|.+..+. +|+++.+.+.......++.+++.. +.+++.||+++|+....+.++..++..
T Consensus 223 ~~~~~~~~~~~~~~~~p~~~~~~-----~g~~~~~~g~~~~~~~~~~~~g~~-~~g~l~~r~~~~~~~~~~~~~~~~g~~ 296 (406)
T PRK15402 223 ALGLVSLPLLAWIALSPVILISG-----EQLSSYEYGLLQVPVFGALIAGNL-TLARLTSRRPLRSLIRMGLWPMVAGLL 296 (406)
T ss_pred HHHHHHHHHHHHHHHhHHHHHHH-----hCCCHHHHHHHHHHHHHHHHHHHH-HHHHHHHhcCHHHHHHHHHHHHHHHHH
Confidence 66665554455555566665433 788898888888777777888877 889999999999998888877776666
Q ss_pred HHHHHHHhhhhhHHHHHHHHHHHHhhhhHHHHhHHHHHHhhcCCcchhhHHhHHHHHHHHHHHHHhhhHHHHHHHHh
Q 011783 361 SYPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIAMTGMSLFKAAGPAGGGALFSWA 437 (477)
Q Consensus 361 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~ 437 (477)
.+.......... +........+.+++.+...+........ .+++++|++.++.+..+.++..+|+.+.+.+++..
T Consensus 297 ~~~~~~~~~~~~-~~~~~~~~~~~g~g~~~~~~~~~~~~~~-~~~~~~g~~~~~~~~~~~~~~~~g~~~~~~l~~~~ 371 (406)
T PRK15402 297 LAALATVISSHA-YLWLTAGLSLYAFGIGLANAGLYRLTLF-SSDVSKGTVSAAMGMLSMLIFTVGIELSKHAYLGG 371 (406)
T ss_pred HHHHHHHccccc-HHHHHHHHHHHHHHHHHHhhhHHHHHhh-hccccccHHHHHHHHHHHHHHHHHHHHHHhcccCC
Confidence 555443211111 1122233333345555555555554444 44589999999999999999999999999998766
No 39
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=100.00 E-value=6.9e-34 Score=279.10 Aligned_cols=424 Identities=13% Similarity=0.084 Sum_probs=266.7
Q ss_pred CCchhHHHHHHHHHHHhhhchhchHhHHHHHHHHh-----cccccchhhhhhhHHHHHHHHHHHHHHhhhhhhhhhhcCC
Q 011783 37 GLPITELFSIWIIVLCTALPISSLFPFLYFMIKDF-----QIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGR 111 (477)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~s~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~Gr 111 (477)
+..++.+.++.++.+.+.++...++...|.+.+++ +.+..+ .+++.+.+.++..++++++|+++||+||
T Consensus 12 ~~~~~~~~~~~~~~~~~g~d~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~ig~~ig~~~~g~l~d~~Gr 85 (502)
T TIGR00887 12 WQHFRAIVIAGVGFFTDSYDLFCISLVTKMLGYVYYHGKGPLPSSV------SAAVNGSASIGTLAGQLFFGWLADKLGR 85 (502)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCcccchHHH------HHHHHHHHHHHHHHHHHHHHHHHHhhcc
Confidence 34445566778888999999999999999877753 222333 7899999999999999999999999999
Q ss_pred chhhHHHHHHHHHHHHHHHhhhh------HHHHHHHHHHhhhcccchhhH-HHHhhhhccccchhhHHHHHHHHhHHHHH
Q 011783 112 KPVIIMGTASVVIFNTLFGLSVN------FWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLI 184 (477)
Q Consensus 112 r~~~~~~~~~~~i~~~~~~~~~~------~~~l~~~r~l~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~ 184 (477)
|+++.++.++..++.++++++++ ++.+++.|+++|++.|...+. ..+++|++|+++|++++++.+....+|..
T Consensus 86 r~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~g~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~g~~ 165 (502)
T TIGR00887 86 KRVYGMELIIMIIATVASGLSPGSSPKSVMATLCFWRFWLGVGIGGDYPLSAIITSEFATKKWRGAMMAAVFAMQGFGIL 165 (502)
T ss_pred HHHHHHHHHHHHHHHHHHHHccCcccchHHHHHHHHHHHHHHHHhhhhHHHHHHHHHhcChhhHHHHHHHHHHHHHHHHH
Confidence 99999999999999999888765 789999999999999998877 99999999999999999999999999999
Q ss_pred HHHhHHHHhhhccc-------cC---------CcccccccccccccchHHHHHHHHHhhccccccCCCCCCc---cchhh
Q 011783 185 IGPALGGFLAQPAE-------KY---------PNLFSSESLFGKFPYFLPCLCISLFAFGETLHRHNDDDDS---CDVSY 245 (477)
Q Consensus 185 ~g~~~~~~l~~~~~-------~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~---~~~~~ 245 (477)
+++.++..+..... ++ ...++||..+...........+..+.+||+|++...++++ .++..
T Consensus 166 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~WR~~~~~~~ip~~i~~~~~~~lpESpr~l~~~~~~~~~a~~~~ 245 (502)
T TIGR00887 166 AGAIVALIVLAGFKHSLEAAADEASCTGSCVPAVDYMWRILIGFGAVPALLALYFRLTIPETPRYTADVAKDVEQAASDM 245 (502)
T ss_pred HHHHHHHHHHHHhccccccccccccccccccchhcccHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHhCcchHHHHHHH
Confidence 99999877643110 00 0113566665211111222334445789999873322111 11111
Q ss_pred hhhhh-----hhccch---hhcccCCchhhhhhcch---hhHHHHH----HHHHHHhhhhhhHHHHHHhhcCcccCCccc
Q 011783 246 DALES-----ASAEVK---EEEGREATPKKSLLKNW---PLMSSII----VYCVFSLHDMAYSEIFSLWANSPKKLGGLN 310 (477)
Q Consensus 246 ~~~~~-----~~~~~~---~~~~~~~~~~~~~~~~~---~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 310 (477)
.+..+ +.++.+ ++++....+++++++++ +.+...+ ..+......++...+.|.++.. .|
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~p~i~~~------~G 319 (502)
T TIGR00887 246 SAVLQVKIEAEPDEVEKASTAVEVPKASWSDFFTHFFKWRHGKHLLGTAGSWFLLDIAFYGVNLNQKVILSA------IG 319 (502)
T ss_pred HHHhccccccCcccccchhccccchhhhHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHccccccHHHHHH------Hc
Confidence 11100 000000 00011112466666532 2211111 1111111222222233433332 45
Q ss_pred cchhhhH-----------H-HHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHH
Q 011783 311 YSTQMVG-----------E-VLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTIPLLTSYPYIAMLSGFGLAFLLN 378 (477)
Q Consensus 311 ~~~~~~g-----------~-~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 378 (477)
+++.+.+ . ......++.+++.+ +.+++.||+|||+.+..+..+..+++..+...............
T Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~-~~~~l~dr~gRR~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~- 397 (502)
T TIGR00887 320 YSPPAATNNAYEELYKTAVGNLIIALAGTVPGYW-VTVFLVDIIGRKPIQLMGFFILTVLFFVLGFAYNHLSTHGFLAI- 397 (502)
T ss_pred CCCCccchhHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHhhhhcchhHHHHHHHHHHHHHHHHHHHHHhcchhHHHHH-
Confidence 5443211 1 12233344455555 88999999999999888877777666555443221111111111
Q ss_pred HHHHHHhhhhHHHHhHHHHHHhhcCCcchhhHHhHHHHHHHHHHHHHhhhHHHHHHHHhhhhccccCCCCchHHHHHHHH
Q 011783 379 CASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIAMTGMSLFKAAGPAGGGALFSWAQKRLDASFLPGSQMVFFVLNV 458 (477)
Q Consensus 379 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~g~~~~~~~~~~ 458 (477)
......++..+..+..+.+..|.+|++.|+++.|+.+.+..++++++|.+.+.+.+....+.......++...|++.++
T Consensus 398 -~~~~~~~~~~~~~~~~~~~~~E~~p~~~R~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~ 476 (502)
T TIGR00887 398 -YVLAQFFANFGPNATTFIVPGEVFPTRYRSTAHGISAASGKAGAIIGQFGFLYLAQHGDPTKGYPTGIWMGHVLEIFAL 476 (502)
T ss_pred -HHHHHHHHhcCCCchhhhhhhccCchhHHHHHHHHHHHHhhhHHHHHHHHhhhhhccccccccccccccchHHHHHHHH
Confidence 1111112233445666778899999999999999999999999999999999998743111000000045567788888
Q ss_pred HHHHHHHHHhhhhhhccCC
Q 011783 459 VEAIGVLMTFKPFLAQRHD 477 (477)
Q Consensus 459 ~~~~~~~~~~~~~~~~~~~ 477 (477)
+++++.+..+ ++||+++
T Consensus 477 ~~~~~~i~~~--~lpEt~~ 493 (502)
T TIGR00887 477 FMFLGILFTL--LIPETKG 493 (502)
T ss_pred HHHHHHHHhe--EeccCCC
Confidence 8777766543 3677653
No 40
>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=100.00 E-value=6.2e-35 Score=254.88 Aligned_cols=369 Identities=35% Similarity=0.511 Sum_probs=269.2
Q ss_pred hchHhHHHHHHHHhcccccchh--hhhhhHHHHHHHHHHHHHHhhhhhhhhhhcCCchhhHHHHHHHHHHHHHHHhhhhH
Q 011783 58 SSLFPFLYFMIKDFQIAKREED--IGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLSVNF 135 (477)
Q Consensus 58 ~~~~~~~~~~~~~~~~s~~~~~--~~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~Grr~~~~~~~~~~~i~~~~~~~~~~~ 135 (477)
....+..-.+.++|+.-..+++ ...+.|.+.+.+.+.+.+.++.+|.++||+|||++++++++..++...+.+.++||
T Consensus 42 ~~L~~~~~~~V~~F~~a~~~~~~~~~~yaGflGSsF~ilQ~~sS~~~G~~SD~yGRkpvll~c~~~va~s~ll~~~S~~F 121 (451)
T KOG2615|consen 42 SSLYPFVVFMVRDFNIAIGEPDGASVFYAGFLGSSFSILQFISSPLWGCLSDRYGRKPVLLACLIGVALSYLLWALSRNF 121 (451)
T ss_pred cchhHHHHHhhHHHHHhhCCcccccchhhhhHhhHHHHHHHHhhhhhhhhhhhhCchHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4555666677788876555544 56679999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhhcccchhhHHHHhhhhccccchhhHHHHHHHHhHHHHHHHHhHHHHhhhcc---ccCCccccccccccc
Q 011783 136 WMAVLTRFLLGSLNGLLGPIKAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPA---EKYPNLFSSESLFGK 212 (477)
Q Consensus 136 ~~l~~~r~l~G~~~g~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~---~~~~~~~~~~~~~~~ 212 (477)
..++++|++.|+..|...++.++++|++++|+|+++++..+.++++|.++||.+||++.... ..++..+. ..+ .
T Consensus 122 ~afv~aR~l~Gi~kgnl~v~rAiisdV~sek~r~l~ms~v~~a~~lGfilGPmIGgyla~f~~~~g~~p~alP--~~~-v 198 (451)
T KOG2615|consen 122 AAFVLARFLGGIFKGNLSVIRAIISDVVSEKYRPLGMSLVGTAFGLGFILGPMIGGYLAQFSSISGSYPFALP--CLL-V 198 (451)
T ss_pred HHHHHHHHhhhhccCchHHHHHHHHhhcChhhccceeeeeehhhhcchhhcchhhhHHHhhHhhhccCchHHH--HHH-H
Confidence 77777799999999999999999999999999999999999999999999999999998722 11111110 000 0
Q ss_pred ccchHHHHHHHHHhhccccccCCCCCCccchhhhhhhhhhccchhhcccCCchhhhhhcchhhHHHHHHHHHHHhhhhhh
Q 011783 213 FPYFLPCLCISLFAFGETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKSLLKNWPLMSSIIVYCVFSLHDMAY 292 (477)
Q Consensus 213 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (477)
..+.........+++||+.+.++.. ++.+.. .+..++.++..+.........+||++....+..+..+....+.+
T Consensus 199 ~i~a~~~v~~~~~~lpETL~~rk~~-~~~~~~----~~~~~~~~~~~~~~~~~~v~~lrn~p~~~~i~~~~i~~l~~~ly 273 (451)
T KOG2615|consen 199 FILAAGDVTFFPWFLPETLPLRKRN-DEHSTL----QEAADDRLALLKFARIFKVAALRNPPLLDFISVLRIFGLHYFLY 273 (451)
T ss_pred HHHHHHHHHHHHHhCCccccchhhc-ccccch----hhhhhhhhhhcchhhhhhhhhhcCccccchHHHHHHHHHHHHHH
Confidence 0001111234456788887665544 221111 11111111111111222345667877777777777777777888
Q ss_pred HHHHHHhhcCcccC--CccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHhhc--chhHHHHHHHHHHHHHHHHHHHHHh
Q 011783 293 SEIFSLWANSPKKL--GGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILG--PIMVARIAGVLTIPLLTSYPYIAML 368 (477)
Q Consensus 293 ~~~~~~~~~~~~~~--~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~ 368 (477)
..+++.|..+.... +++|+++.+.|.+++..++.+.+.+..+.++ .+|.+ .+..+.....++...++.+.....
T Consensus 274 ~~l~s~~~~t~~~l~~~rfg~ss~~~G~vl~~tGl~m~~~ql~~~~~-l~~~~~~~~a~l~~~l~~~vP~~llls~~~~- 351 (451)
T KOG2615|consen 274 LELFSGLENTVLFLTHGRFGYSSMQQGKVLSTTGLLMLVIQLALVPI-LPRYKGNIKAVLLFSLLLIVPAFLLLSLART- 351 (451)
T ss_pred HHHHHHHHhhHHHhhcCccCCChhhheeeeehhhHHHHHHHHhcccc-ccccccchhhHHHHHHHHHHHHHHHHhcccc-
Confidence 88888777765544 7799999999999999999999988744443 34433 344444444444444444433322
Q ss_pred hhhhHHHHHHHHHHHHhhhhHHHHhHHHHHHhhcCCcchhhHHhHHHHHHHHHHHHHhhhHHHHHHHHhhhhc
Q 011783 369 SGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIAMTGMSLFKAAGPAGGGALFSWAQKRL 441 (477)
Q Consensus 369 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~ 441 (477)
...+.....+..+......+....++.+..|+++||+++|+..+.+.++.++||.+.|.+..|....+
T Consensus 352 -----~~~l~~~s~l~sf~~A~~vt~Lt~Lv~~~~~~~qrG~~~Gi~~Sl~alaRaiGPlv~g~i~~Ws~~~~ 419 (451)
T KOG2615|consen 352 -----PVVLYLGSTLKSFSTASVVTCLTSLVHKYGPQSQRGTLNGIFRSLGALARAIGPLVSGVIFSWSQGAQ 419 (451)
T ss_pred -----chhhhHHHHHHHHHHHHhhHHHHHHHHhcCCcccchHHHHHHHHHHHHHHHhhhhhhheeEEEecCCC
Confidence 23566666677788888888999999999999999999999999999999999999999998875443
No 41
>PRK15075 citrate-proton symporter; Provisional
Probab=100.00 E-value=1.5e-32 Score=264.85 Aligned_cols=363 Identities=15% Similarity=0.111 Sum_probs=241.8
Q ss_pred hhHHHHHHHHHHHhhhchhchHhHHHHHHHHhcccccchhhhhhhHHH-HHHH-----HHHHHHHhhhhhhhhhhcCCch
Q 011783 40 ITELFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYV-GSSF-----MFGRALTSVFWGLVADRYGRKP 113 (477)
Q Consensus 40 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~g~~-~s~~-----~~~~~~~~~~~G~l~Dr~Grr~ 113 (477)
++....++++.+++++|...++...|.+.+|++.++.+ .+.+ .+.. .++..+++++.|+++||+|||+
T Consensus 14 ~~~~~~~~~~~~~~~~d~~~~~~~~~~i~~~~~~~~~~------~~~~~~~~~~~~~~~l~~~ig~~~~G~l~Dr~Grr~ 87 (434)
T PRK15075 14 ARAILRVTSGNFLEMFDFFLFGFYATAIAKTFFPAGNE------FASLMLTFAVFGAGFLMRPLGAIVLGAYIDRVGRRK 87 (434)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCc------hHHHHHHHHHHHHHHHHhhhHHHHHHHHhhhhchHH
Confidence 34566888999999999999999999999999988877 5433 2222 3333578999999999999999
Q ss_pred hhHHHHHHHHHHHHHHHhhhhHH--------HHHHHHHHhhhcccchhhH-HHHhhhhccccchhhHHHHHHHHhHHHHH
Q 011783 114 VIIMGTASVVIFNTLFGLSVNFW--------MAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLI 184 (477)
Q Consensus 114 ~~~~~~~~~~i~~~~~~~~~~~~--------~l~~~r~l~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~ 184 (477)
+++.+.++++++.++++++++++ .+++.|+++|++.+...+. ..+++|++|+++|++++++.....++|..
T Consensus 88 ~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~~~e~~p~~~rg~~~~~~~~~~~~g~~ 167 (434)
T PRK15075 88 GLIVTLSIMASGTLLIAFVPGYATIGLAAPLLVLLGRLLQGFSAGVELGGVSVYLAEIATPGRKGFYTSWQSASQQVAVV 167 (434)
T ss_pred HHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHhhccccccHHHHHHHHHhhCCcccchHHHHHHHHHHHHHHH
Confidence 99999999999999999999887 4689999999999988876 89999999999999999999999999998
Q ss_pred HHHhHHHHhhhccccC-CcccccccccccccchHHHHHHHHHhhccccccCCCCCCccchhhhhhhhhhccchhhcccCC
Q 011783 185 IGPALGGFLAQPAEKY-PNLFSSESLFGKFPYFLPCLCISLFAFGETLHRHNDDDDSCDVSYDALESASAEVKEEEGREA 263 (477)
Q Consensus 185 ~g~~~~~~l~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (477)
+++.+++.+.....++ ...++||..|. . ....+...+.+.+.+++. + +.. ++ . ++.+..
T Consensus 168 ~g~~~g~~l~~~~~~~~~~~~gWr~~f~-~---~~~~~~~~~~~~~~~~e~----~--~~~-~~---~------~~~~~~ 227 (434)
T PRK15075 168 FAALLGYLLNQWLSPAQMAEWGWRIPFL-I---GCLIVPFIFLIRRSLEET----E--EFL-AR---K------HRPSMR 227 (434)
T ss_pred HHHHHHHHHHHhCCHHHHhccchHHHHH-H---HHHHHHHHHHHHHhcCCC----H--HHH-Hh---h------hccccc
Confidence 8888888764311100 01346666551 1 111111122222111110 0 000 00 0 001111
Q ss_pred chhhhhhcchhhHHH-HHHHHHHHhhhhhhHHHHHHhhcCcccCCccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 011783 264 TPKKSLLKNWPLMSS-IIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERIL 342 (477)
Q Consensus 264 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~ 342 (477)
...+...+++..+.. +...++..........+.|.|+++. +|++..+.++......++.+++.+ +.+++.||+
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~-----~g~~~~~~~~~~~~~~~~~~~~~~-~~g~l~Dr~ 301 (434)
T PRK15075 228 EIFRSLAANWRIVLAGMLMVAMTTVSFYLITVYTPTFGKTV-----LHLSAADSLLVTLCVGVSNFIWLP-IGGALSDRI 301 (434)
T ss_pred cHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-----cCCCHHHHHHHHHHHHHHHHHHHH-HHHHHHHHh
Confidence 223334445444432 2222233333445556677776643 688888888888888888888888 899999999
Q ss_pred cchhHHHHHHHHHHHHHH-HHHHHHHhhhhhHHHHHHHHHHHHhhhhHHHHhHHHHHHhhcCCcchhhHHhHHHHHHHH-
Q 011783 343 GPIMVARIAGVLTIPLLT-SYPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIAMTGMS- 420 (477)
Q Consensus 343 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~- 420 (477)
+||+....+..+..+... .+..... ..... .......+.+++.+...+....+..|.+|++.|+++.|+.+....
T Consensus 302 g~r~~~~~~~~~~~~~~~~~~~~~~~--~~~~~-~~~~~~~~~~~~~g~~~~~~~~~~~e~~p~~~rg~~~g~~~~~~~~ 378 (434)
T PRK15075 302 GRRPVLIAFTVLAILTAYPALSWLVA--APSFA-RMLAVELWLSFLYGSYNGAMVVALTEVMPAEVRTAGFSLAYSLATA 378 (434)
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHc--CCchH-HHHHHHHHHHHHHHHHHhhHHHHHHHHCCCCccchheeHHHHHHHH
Confidence 999988776544332221 1111111 11111 111111222334445555566788999999999999999766554
Q ss_pred HHHHHhhhHHHHHHHHh
Q 011783 421 LFKAAGPAGGGALFSWA 437 (477)
Q Consensus 421 ~g~~~~~~~~g~l~~~~ 437 (477)
+++.++|.+.|++.|+.
T Consensus 379 ~~g~~~p~~~g~i~~~~ 395 (434)
T PRK15075 379 IFGGFTPAISTWLIHVT 395 (434)
T ss_pred HHhhhHHHHHHHHHHhc
Confidence 46888999999999987
No 42
>PRK10133 L-fucose transporter; Provisional
Probab=100.00 E-value=1e-32 Score=264.79 Aligned_cols=380 Identities=14% Similarity=0.112 Sum_probs=277.1
Q ss_pred hhHHHHHHHHHHHhhhchhchHhHHHHHHHHhcccccchhhhhhhHHHHHHHHHHHHHHhhhhhhhhhhcCCchhhHHHH
Q 011783 40 ITELFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGT 119 (477)
Q Consensus 40 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~Grr~~~~~~~ 119 (477)
...+..+.+..++..+......+.+|.+++++|.++.+ .|++.+.+.+++.+++++.|++.||+|||+++..+.
T Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~~~p~i~~~~~~s~~~------~gl~~~~~~~g~~i~~~~~g~l~dr~G~r~~l~~g~ 98 (438)
T PRK10133 25 IIPFALLCSLFFLWAVANNLNDILLPQFQQAFTLTNFQ------AGLIQSAFYFGYFIIPIPAGILMKKLSYKAGIITGL 98 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHH
Confidence 34566777778888888999999999999999999999 999999999999999999999999999999999999
Q ss_pred HHHHHHHHHH---HhhhhHHHHHHHHHHhhhcccchhhH-HHHhhhhccccchhhHHHHHHHHhHHHHHHHHhHHHHhhh
Q 011783 120 ASVVIFNTLF---GLSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQ 195 (477)
Q Consensus 120 ~~~~i~~~~~---~~~~~~~~l~~~r~l~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~ 195 (477)
++++++.+++ ..+++++.+++.|+++|++.|...+. ++++.|+.|+++|.+.++..+..+.+|..+||.+++.+..
T Consensus 99 ~~~~~~~~l~~~~~~a~~~~~ll~~r~l~G~g~g~~~~~~~~~v~~~~~~~~~~~~~s~~~~~~~~G~~~g~~~g~~l~~ 178 (438)
T PRK10133 99 FLYALGAALFWPAAEIMNYTLFLVGLFIIAAGLGCLETAANPFVTVLGPESSGHFRLNLAQTFNSFGAIIAVVFGQSLIL 178 (438)
T ss_pred HHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 9999999875 46789999999999999999998887 8999998887777778999999999999999999887651
Q ss_pred cc-----------------ccCCcc--cccccccccccchHHHHHHHHHhhccccccCCCCCCccchhhhhhhhhhccch
Q 011783 196 PA-----------------EKYPNL--FSSESLFGKFPYFLPCLCISLFAFGETLHRHNDDDDSCDVSYDALESASAEVK 256 (477)
Q Consensus 196 ~~-----------------~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (477)
.. .+||+. .+||..|.... ....++..++.....++. +.+ ++.+.
T Consensus 179 ~~~~~~~~~~~~~l~~~~~~~w~~~~~~~w~~~f~~~~-~v~~~~~~~~~~~~~p~~-~~~-~~~~~------------- 242 (438)
T PRK10133 179 SNVPHQSQDVLDKMTPEQLSAYKHSLVLSVQTPYMIIV-AIVLLVALLIMLTKFPAL-QSD-NHSDA------------- 242 (438)
T ss_pred cCCcccchhhhhccChhhHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHhcCCCC-Ccc-ccccc-------------
Confidence 11 146554 36766651001 111111111111111110 000 00000
Q ss_pred hhcccCCchhhhhhcchhhHHHHHHHHHHHhhhhhhHHHHHHhhcCcccCCccccchhhhHHHHHHHHHHHHHHHHHHHH
Q 011783 257 EEEGREATPKKSLLKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYP 336 (477)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~ 336 (477)
++.+.....++++|+|.++...+..+++.........+.+.|+.+ +.+|+++.+++..+....++.++++. ..+
T Consensus 243 -~~~~~~~~~~~ll~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~----~~~g~s~~~ag~~~~~~~~~~~vG~~-~~g 316 (438)
T PRK10133 243 -KQGSFSASLSRLARIRHWRWAVLAQFCYVGAQTACWSYLIRYAVE----EIPGMTAGFAANYLTGTMVCFFIGRF-TGT 316 (438)
T ss_pred -cccchhhhHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHHHHhh----hcCCCCHHHHHHHHHHHHHHHHHHHH-HHH
Confidence 011112345678899988877666666666666566666666421 23799999999999999999999998 999
Q ss_pred HHHHhhcchhHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhhhhHHHHhHHHHHHhhcCCcchhhHHhHHHH
Q 011783 337 FLERILGPIMVARIAGVLTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIAM 416 (477)
Q Consensus 337 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~ 416 (477)
++.||+++|+.+..+..+..+.++...+... . . ......+.+++.+..+|..++...+..|+ +.+++.++..
T Consensus 317 ~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~~---~--~--~~~~~~l~glg~~~i~P~~~s~a~~~~~~-~~~~as~l~~ 388 (438)
T PRK10133 317 WLISRFAPHKVLAAYALIAMALCLISAFAGG---H--V--GLIALTLCSAFMSIQYPTIFSLGIKNLGQ-DTKYGSSFIV 388 (438)
T ss_pred HHHHHcCHHHHHHHHHHHHHHHHHHHHHcCC---h--H--HHHHHHHHHHHHHHHHHHHHHHHHcccch-hhccchhHHh
Confidence 9999999999988887766655544433221 1 1 12233445778899999999999997764 5788888876
Q ss_pred HHHHHHHHHhhhHHHHHHHHhhhhccccCCCC-chHHHHHHHHHHHHHHHH
Q 011783 417 TGMSLFKAAGPAGGGALFSWAQKRLDASFLPG-SQMVFFVLNVVEAIGVLM 466 (477)
Q Consensus 417 ~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~g-~~~~~~~~~~~~~~~~~~ 466 (477)
....|+.++|.+.|.+.|.. | .+..|++...+.+.....
T Consensus 389 -~~~~g~~~~~~i~G~l~~~~----------g~~~~~~~v~~~~~~~~~~~ 428 (438)
T PRK10133 389 -MTIIGGGIVTPVMGFVSDAA----------GNIPTAELIPALCFAVIFIF 428 (438)
T ss_pred -HHhccchHHHHHHHHHHHhc----------cchHHHHHHHHHHHHHHHHH
Confidence 45578899999999998876 5 556776655444444443
No 43
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=100.00 E-value=9.3e-33 Score=262.92 Aligned_cols=371 Identities=16% Similarity=0.209 Sum_probs=266.0
Q ss_pred HHHHHHHHHhhhchhchHhHHH-HHHHHhcccccchhhhhhhHHHHHHHHHHHHHHhhhhhhhhhhcCCchhhHHHHHHH
Q 011783 44 FSIWIIVLCTALPISSLFPFLY-FMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASV 122 (477)
Q Consensus 44 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~s~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~Grr~~~~~~~~~~ 122 (477)
.++....++..++.....|.++ ++.+++|.+..+ +|++.+...++..+.+++.|+++||+|||+++..+.++.
T Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~------~gl~~~~~~l~~~~~~~~~G~l~dr~g~k~~l~~~~~~~ 86 (400)
T PRK11646 13 YFLLIDNMLVVLGFFVVFPLISIRFVDQLGWAAVM------VGIALGLRQFIQQGLGIFGGAIADRFGAKPMIVTGMLMR 86 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCcHHH------HHHHHHHHHHHHHHHHhhhhHHHHHhCchHHHHHHHHHH
Confidence 4556777788888888888887 567899999999 999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhhhHHHHHHHHHHhhhcccchhhH-HHHhhhhccccchhhHHHHHHHHhHHHHHHHHhHHHHhhhccccCC
Q 011783 123 VIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYP 201 (477)
Q Consensus 123 ~i~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~ 201 (477)
+++.+++.++++++++++.|+++|++.+...|. .+++.|++|+|+|++++++.+...++|..+||.+++++.+ .+|+
T Consensus 87 ~~~~~~~~~~~~~~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~g~l~~--~g~~ 164 (400)
T PRK11646 87 AAGFATMAIAHEPWLLWLSCILSGLGGTLFDPPRTALVIKLIRPHQRGRFFSLLMMQDSAGAVIGALLGSWLLQ--YDFR 164 (400)
T ss_pred HHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--hhHH
Confidence 999999999999999999999999998888887 9999999999999999999999999999999999999974 2444
Q ss_pred cccccccccccccchHHHHHHHHHhhccccccCCCCCCccchhhhhhhhhhccchhhcccCCchhhhhhcchhhHHHHHH
Q 011783 202 NLFSSESLFGKFPYFLPCLCISLFAFGETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKSLLKNWPLMSSIIV 281 (477)
Q Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 281 (477)
+.+...... .+...+......||.. + + +. +++....+++.+++|.++...+.
T Consensus 165 ~~f~~~~~~-----~~~~~i~~~~~~~~~~---~-~-~~------------------~~~~~~~~~~~~~~~~~~~~~~~ 216 (400)
T PRK11646 165 LVCATGAVL-----FVLAAAFNAWLLPAYK---L-S-TV------------------RTPVREGMTRVLRDKRFVTYVLT 216 (400)
T ss_pred HHHHHHHHH-----HHHHHHHHHHhCCccc---c-c-cc------------------chhhHHHHHHHHcCchHHHHHHH
Confidence 433321111 1111112222333211 0 0 00 00111245677888887765555
Q ss_pred HHHHHhhhhhhHHHHHHhhcCcccCCccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHH
Q 011783 282 YCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTIPLLTS 361 (477)
Q Consensus 282 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 361 (477)
.+...........+.|.|..+ .+.++.+.+.+.+..++..........++..||.+.++.+..+..+..++...
T Consensus 217 ~~~~~~~~~~~~~~~p~~~~~------~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~ 290 (400)
T PRK11646 217 LTGYYMLAVQVMLMLPIMVND------IAGSPSAVKWMYAIEACLSLTLLYPIARWSEKRFRLEHRLMAGLLIMSLSMFP 290 (400)
T ss_pred HHHHHHHHHHHHHhhhhhHHh------hcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHH
Confidence 444333333334456666544 34467788888888777776665546666667777666666666666655554
Q ss_pred HHHHHHhhhhhHHHHHHHHHHHHhhhhHHHHhHHHHHHhhcCCcchhhHHhHHHHHHHHHHHHHhhhHHHHHHHHhhhhc
Q 011783 362 YPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIAMTGMSLFKAAGPAGGGALFSWAQKRL 441 (477)
Q Consensus 362 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~ 441 (477)
+..... . + .......+.+.+.....|...++..+.+|+++||+++|+.+....+|..+||.+.|.+.|+.+...
T Consensus 291 l~~~~~---~--~-~~~~~~~l~~~g~~~~~p~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~ig~~l~G~l~~~~~~~~ 364 (400)
T PRK11646 291 IGMVSN---L--Q-QLFTLICLFYIGSIIAEPARETLSASLADARARGSYMGFSRLGLALGGAIGYIGGGWLFDLGKALN 364 (400)
T ss_pred HHHhhh---H--H-HHHHHHHHHHHHHHHHHccHHHHHHhcCCcccchhhhhHHHHHHHHHHHhcccchHHHHHHHhhcC
Confidence 443332 1 1 112222233445556677888899999999999999999999999999999999999999864321
Q ss_pred cccCCCCchHHHHHHHHHHHHHHHHHh
Q 011783 442 DASFLPGSQMVFFVLNVVEAIGVLMTF 468 (477)
Q Consensus 442 ~~~~~~g~~~~~~~~~~~~~~~~~~~~ 468 (477)
+....++..+++.+++.+...
T Consensus 365 ------~~~~~~~~~~~~~~~~~~~~~ 385 (400)
T PRK11646 365 ------QPELPWMMLGIIGLITLLALY 385 (400)
T ss_pred ------CcchHHHHHHHHHHHHHHHHH
Confidence 245666666666666655544
No 44
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=100.00 E-value=1.4e-32 Score=262.11 Aligned_cols=351 Identities=16% Similarity=0.139 Sum_probs=259.7
Q ss_pred hHHHHHHHHHHHhhhchhchHhHHHHHHHHhcccccchhhhhhhHHHHHHHHHHHHHHhhhhhhhhhhcCCchhhHHHHH
Q 011783 41 TELFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTA 120 (477)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~Grr~~~~~~~~ 120 (477)
+.+..+....++..++.....+.+|.+.+++|.++++ .+++.+++.++..+++++.|+++||+|||+++..+.+
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~s~~~------~g~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~ 78 (385)
T TIGR00710 5 AFALLLGCLSILGPLGIDMYLPAFPEIAADLSTPASI------VQMTLTLYLLGFAAGQLLWGPLSDRYGRRPVLLLGLF 78 (385)
T ss_pred HHHHHHHHHHHHHHHHHHHhcccHHHHHHHhCCCHHH------HHHHHHHHHHHHHHHHHhhhhHHHhcCChHHHHHHHH
Confidence 4455555556677788889999999999999999999 9999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhhhHHHHHHHHHHhhhcccchhhH-HHHhhhhccccchhhHHHHHHHHhHHHHHHHHhHHHHhhhcccc
Q 011783 121 SVVIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEK 199 (477)
Q Consensus 121 ~~~i~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~ 199 (477)
+.+++.+++.++++++.+++.|++.|++.+...+. .+++.|++|+++|++++++.+....+|..++|.+++.+.+
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~---- 154 (385)
T TIGR00710 79 IFALSSLGLALSNNIETLLVLRFVQAFGASAGSVISQALVRDIYPGEELSRIYSILMPVLALAPAVAPLLGGYILV---- 154 (385)
T ss_pred HHHHHHHHHHHHccHHHHHHHHHHHHcchhHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----
Confidence 99999999999999999999999999999988887 9999999999999999999999999999999999999887
Q ss_pred CCcccccccccccccch-HHHHHHHHHhhccccccCCCCCCccchhhhhhhhhhccchhhcccCCchhhhhhcchhhHHH
Q 011783 200 YPNLFSSESLFGKFPYF-LPCLCISLFAFGETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKSLLKNWPLMSS 278 (477)
Q Consensus 200 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 278 (477)
.++|+..+...... ....+......||+++.+++ .+ .++.....++.+|+|+++..
T Consensus 155 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~----------------~~~~~~~~~~~~~~~~~~~~ 211 (385)
T TIGR00710 155 ---WLSWHAIFAFLSLAGILLSALIFFILPETLPYEAR----IQ----------------ISTYFETFLLLLKSKMFWGY 211 (385)
T ss_pred ---HcCHHHHHHHHHHHHHHHHHHHHHhCCCCCCCccc----CC----------------HHHHHHHHHHHHcCchhHHH
Confidence 34555544211111 11112222233443221110 00 00111245667888888877
Q ss_pred HHHHHHHHhhhhhhHHHHHHhhcCcccCCccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHH
Q 011783 279 IIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTIPL 358 (477)
Q Consensus 279 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 358 (477)
.+...+.......+..+.|.+..+. +|.++.+.+.+.....++.++++. +.+++.||+++|+.+..+..+..++
T Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~-----~g~~~~~~g~~~~~~~~~~~~~~~-~~g~l~~~~~~~~~~~~~~~~~~~~ 285 (385)
T TIGR00710 212 ALIYGASFGGFFAFFSGAPFVYIDI-----MGVSPSVFGLLFALNIIAMIFGGF-LNGRFIKKWGAKSLLRMGLILFAVS 285 (385)
T ss_pred HHHHHHHHHHHHHHHHcChHHHHHH-----cCCCHHHHHHHHHHHHHHHHHHHH-HHHHHHHhcCHHHHHHHHHHHHHHH
Confidence 6666555544455555556555433 788999999999999999999988 8999999999999888887776666
Q ss_pred HHHHHHHHHhhhhhHHHHHHHHHHHHhhhhHHHHhHHHHHHhhcCCcchhhHHhHHHHHHHHHHHHHhhhHHHH
Q 011783 359 LTSYPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIAMTGMSLFKAAGPAGGGA 432 (477)
Q Consensus 359 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~ 432 (477)
...+........ ..+........+.+++.....+.......|..| ++++++.++.+.....++.+.+.+.+.
T Consensus 286 ~~~~~~~~~~~~-~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~g~i~~~~~~~ 357 (385)
T TIGR00710 286 AVLLEITAILGL-GSWAMIIGPMMFVGIGNSMISSIAMAYALEDFP-HVAGTASALFGTLRLVLGAIVGYLVSL 357 (385)
T ss_pred HHHHHHHHHhcc-chHHHHHHHHHHHHHHHHHHHHHHHHHHhccCc-ccchHHHHHHHHHHHHHHHHHHHHHHh
Confidence 555544332111 112222333344455566677777777778776 679999999998887766666666663
No 45
>PRK03893 putative sialic acid transporter; Provisional
Probab=100.00 E-value=6.3e-33 Score=273.25 Aligned_cols=391 Identities=14% Similarity=0.117 Sum_probs=263.8
Q ss_pred CCchhHHHHHHHHHHHhhhchhchHhHHHHHHHHhcccccchhhhhhhHHHHHHHHHHHHHHhhhhhhhhhhcCCchhhH
Q 011783 37 GLPITELFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVII 116 (477)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~Grr~~~~ 116 (477)
+.+++.+..+++..+++.++.....+.+|.+.+++|.+..+ .+++.+.+.+++.+++++.|+++||+|||+++.
T Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~------~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~ 89 (496)
T PRK03893 16 RAQWKAFSAAWLGYLLDGFDFVLITLVLTEVQGEFGLTTVQ------AASLISAAFISRWFGGLLLGAMGDRYGRRLAMV 89 (496)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHH
Confidence 34556777888999999999999999999999999999999 999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhhhhHHHHHHHHHHhhhcccchhhH-HHHhhhhccccchhhHHHHHHHHhHHHHHHHHhHHHHhhh
Q 011783 117 MGTASVVIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQ 195 (477)
Q Consensus 117 ~~~~~~~i~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~ 195 (477)
.+.++.+++.+++++++|++.+++.|++.|++.+...+. .+++.|++|+++|++++++...+..+|..++|.+++.+.+
T Consensus 90 ~~~~~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~ 169 (496)
T PRK03893 90 ISIVLFSVGTLACGFAPGYWTLFIARLVIGMGMAGEYGSSATYVIESWPKHLRNKASGFLISGFSIGAVVAAQVYSLVVP 169 (496)
T ss_pred HHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 999999999999999999999999999999998887776 9999999999999999999999999999999999999887
Q ss_pred ccccCCcccccccccccccchHHHHHHHHHhhccccccCCCCCCccchhhhhhhhhhccchhhcccCCc------hhhhh
Q 011783 196 PAEKYPNLFSSESLFGKFPYFLPCLCISLFAFGETLHRHNDDDDSCDVSYDALESASAEVKEEEGREAT------PKKSL 269 (477)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~ 269 (477)
.++|+..|..........+.....+||.++++++++++.+ . ++..+.....+.+...... .....
T Consensus 170 -------~~~w~~~f~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (496)
T PRK03893 170 -------VWGWRALFFIGILPIIFALWLRKNLPEAEDWKEKHAGKAP-V-RTMVDILYRGEHRIINILLTLAAAAALWFC 240 (496)
T ss_pred -------cCCHHHHHHHHHHHHHHHHHHHHhCCCchhhhhhcccccc-c-hhHHHHHhcchhHHHHHHHHHHHHHHHHHH
Confidence 4455555511000011111111223333221111110000 0 0000000000000000000 00000
Q ss_pred -------------------------------hcchhhHHHHHHHHHHHhhhhhhHHHHHHhhcCcccCCccccchhhhHH
Q 011783 270 -------------------------------LKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGE 318 (477)
Q Consensus 270 -------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~ 318 (477)
.+.+.........+...........+.|.|+.+. +|++..+.+.
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~l~~~-----~g~~~~~~g~ 315 (496)
T PRK03893 241 FAGNLQNAAIVAVLGLLCAAIFISFMVQSSGKRWPTGVMLMVVVLFAFLYSWPIQALLPTYLKTD-----LGYDPHTVAN 315 (496)
T ss_pred HHhhhcchhHHHHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHhccchHHHHHHHHHHhh-----cCCCHHHHHH
Confidence 0000000111111111111122345667776533 7899999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhhhhHHHHhHHHHH
Q 011783 319 VLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFIL 398 (477)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 398 (477)
+.+...++.+++.. +.+++.||+++|+.+..+..+..+..+.+..... . ..+ ......++.++...+..+....+
T Consensus 316 ~~~~~~~~~~~g~~-~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~-~--~~~-~~~~~~~~~~~~~~~~~~~~~~~ 390 (496)
T PRK03893 316 VLFFSGFGAAVGCC-VGGFLGDWLGTRKAYVCSLLISQLLIIPVFAIGG-A--NVW-VLGLLLFFQQMLGQGISGLLPKL 390 (496)
T ss_pred HHHHHHHHHHHHHH-HHHHHHHHhcchHHHHHHHHHHHHHHHHHhhccc-c--HHH-HHHHHHHHHHHHhcccchhhHHH
Confidence 99999999999988 8999999999999887776555544433222211 1 111 11111121122233344556678
Q ss_pred HhhcCCcchhhHHhHHHHHHHHHHHHHhhhHHHHHHHHhhhhccccCCCCchHHHHHHHHHHHH
Q 011783 399 QNRAVDQDQRGAANGIAMTGMSLFKAAGPAGGGALFSWAQKRLDASFLPGSQMVFFVLNVVEAI 462 (477)
Q Consensus 399 ~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 462 (477)
.++.+|+++||+++|+.+....+|+.++|.+.|.+.+.. |++..+...++++.+
T Consensus 391 ~~~~~~~~~~g~~~~~~~~~~~~g~~lgp~l~g~l~~~~----------g~~~~~~~~~~~~~~ 444 (496)
T PRK03893 391 IGGYFDTEQRAAGLGFTYNVGALGGALAPILGALIAQRL----------DLGTALASLSFSLTF 444 (496)
T ss_pred HHhhCCHHHhhcccchhhhhhhHHHHHHHHHHHHHhccC----------ChHHHHHHHHHHHHH
Confidence 889999999999999999999999999999999999987 777776555544333
No 46
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=100.00 E-value=1e-32 Score=266.87 Aligned_cols=394 Identities=14% Similarity=0.059 Sum_probs=267.9
Q ss_pred CCchhHHHHHHHHHHHhhhchhchHhHHHHHHHHhcccccchhhhhhhHHHHHHHHHHHHHHhhhhhhhhhhcCCchhhH
Q 011783 37 GLPITELFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVII 116 (477)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~Grr~~~~ 116 (477)
..+|..+...++...........+...+|.+.+++|.+.++ .+++.+.+.++..++.++.|+++||+|||++++
T Consensus 15 ~~~w~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~g~s~~~------~~~~~s~~~~~~~~~~~~~G~l~dr~g~r~~l~ 88 (455)
T TIGR00892 15 GWGWVVLGATFVSIGFSYAFPKAVTVFFKELQQIFQATYSE------TAWISSIMLAVLYAGGPISSILVNRFGCRPVVI 88 (455)
T ss_pred CcchHHHHHHHHHHHHHHhhhcchhhhHHHHHHHhCcchhH------HHHHHHHHHHHHHHhhHHHHHHHHHcCchHHHH
Confidence 34455555555555555555566778899999999999999 999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhhhhHHHHHH-HHHHhhhcccchhhH-HHHhhhhccccchhhHHHHHHHHhHHHHHHHHhHHHHhh
Q 011783 117 MGTASVVIFNTLFGLSVNFWMAVL-TRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLA 194 (477)
Q Consensus 117 ~~~~~~~i~~~~~~~~~~~~~l~~-~r~l~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~ 194 (477)
.+.++.+++.++++++++++.+++ .|+++|++.+...+. .+++.++++ ++|+++.++.+.+..+|..++|.+++.+.
T Consensus 89 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~G~~~~~~~~~~~~~~~~~~~-~~r~~a~g~~~~~~~~g~~~~~~l~~~l~ 167 (455)
T TIGR00892 89 AGGLLASLGMILASFSSNVIELYLTAGFITGLGLAFNFQPSLTMLGKYFY-RRRPLANGLAMAGSPVFLSTLAPLNQYLF 167 (455)
T ss_pred hhHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcchhhhhHHHHHHHHHHH-hhHHHHHHHHHhcccHHHHHHHHHHHHHH
Confidence 999999999999999999998875 579999998875444 888899996 78999999999999999999999999998
Q ss_pred hccccCCcccccccccccccchHHHHHHHHHhh-ccccccCCCCCCccchhhhhhhhhh-ccchhhcccCCchhhhhhcc
Q 011783 195 QPAEKYPNLFSSESLFGKFPYFLPCLCISLFAF-GETLHRHNDDDDSCDVSYDALESAS-AEVKEEEGREATPKKSLLKN 272 (477)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 272 (477)
+ .++||..|...........+..+++ ++.+.+...+.++.+...++...+. ......++..+....+++++
T Consensus 168 ~-------~~gwr~~f~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (455)
T TIGR00892 168 E-------SFGWRGSFLILGGLLLHCCVCGALMRPVGPSQRVSKSKSKEGLPPDGSTKKLSKKSTAEKINRFLDFSLFTH 240 (455)
T ss_pred H-------HhChHHHHHHHHHHHHHHHHHHHHhCCCCcccccccccccccCCCCCccccccccchhhhhhhhcchHHhcC
Confidence 7 4556655521111111111122222 2111110000000000000000000 00000000001111257788
Q ss_pred hhhHHHHHHHHHHHhhhhhhHHHHHHhhcCcccCCccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHhh--cchhHHHH
Q 011783 273 WPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERIL--GPIMVARI 350 (477)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~--~~~~~~~~ 350 (477)
|+++......++..........+++.|..+ .|++..+.+.+.+..+++.+++++ +.+++.||. ++++....
T Consensus 241 ~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~------~g~s~~~~g~~~~~~~~~~~~~~~-~~g~l~d~~~~~~~~~~~~ 313 (455)
T TIGR00892 241 RGFLVYLSGNVIMFLGFFAPIIFLVPYAKD------KGVDEYEAAFLLSIIGFVDIFARP-SCGLIAGLKWIRPHVQYLF 313 (455)
T ss_pred chHHHHHHHHHHHHHHccchHHHHHHHHHH------cCCCHHHHHHHHHHHHHHHHHHHH-HHHHHhcccccCHHHHHHH
Confidence 988887777776666666666677777653 688999999999999999999888 888998873 33333333
Q ss_pred HH--HHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhhhhHHHHhHHHHHHhhcCCcchhhHHhHHHHHHHHHHHHHhhh
Q 011783 351 AG--VLTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIAMTGMSLFKAAGPA 428 (477)
Q Consensus 351 ~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~ 428 (477)
+. .+.++..+...... + .+ .+.+..++.+++.+...+...++..+.+|++++++++|+++...++|++++|.
T Consensus 314 ~~~~~~~~l~~ll~~~~~---~--~~-~~~i~~~~~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~igp~ 387 (455)
T TIGR00892 314 SFALLFNGLTHLLCALAG---D--YT-GLVIYCIFFGLSFGSVGALLFEVLMDLVGAQRFSSAVGLVTIVECCAVLIGPP 387 (455)
T ss_pred HHHHHHHHHHHHHHHHhc---h--HH-HHHHHHHHHHHHhchHHHHHHHHHHHHhhHHHHhhHHhHHHHHHHHHHHcccc
Confidence 22 22222222222111 1 11 22333444456666777788888899999999999999999999999999999
Q ss_pred HHHHHHHHhhhhccccCCCCchHHHHHHHHHHHHHHHH
Q 011783 429 GGGALFSWAQKRLDASFLPGSQMVFFVLNVVEAIGVLM 466 (477)
Q Consensus 429 ~~g~l~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 466 (477)
++|.+.+.. ++|+..|++.+++.+++.+.
T Consensus 388 i~G~l~~~~---------g~~~~~f~~~~~~~li~~~~ 416 (455)
T TIGR00892 388 LAGRLVDAT---------KNYKYIFYASGSIVVSAGLF 416 (455)
T ss_pred ceeeeehhc---------CCcchHHHHhhHHHHHHHHH
Confidence 999999876 14778888887777666553
No 47
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=100.00 E-value=3.2e-32 Score=258.71 Aligned_cols=364 Identities=14% Similarity=0.130 Sum_probs=260.8
Q ss_pred HHHHHHhhhchhchHhHHHH-HHHHhcccccchhhhhhhHHHHHHHHHHHHHHhhhhhhhhhhcCCchhhHH-HHHHHHH
Q 011783 47 WIIVLCTALPISSLFPFLYF-MIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIM-GTASVVI 124 (477)
Q Consensus 47 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~s~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~Grr~~~~~-~~~~~~i 124 (477)
.+..++..++.+...|.+|. +.+++|.++.+ .|++.+++.+...+.+++.|+++||+||||.++. +.+...+
T Consensus 3 ~~~~~~~~~~~~~~~~~l~~~l~~~~g~s~~~------~g~~~~~~~~~~~~~~~~~g~l~Dr~g~r~~~~~~~~~~~~~ 76 (375)
T TIGR00899 3 LLVAFLTGIAGALQFPTLSLFLSEEVRARPAM------IGLFYTGSAIVGIAVSQLLATRSDYQGDRKGLILFCCLLAAL 76 (375)
T ss_pred hHHHHHHHHHHHHHhhHHHHHHHcccCCCHHH------HHHHHHHHHHHHHHHHHHHHHHHhccCCchHHHHHHHHHHHH
Confidence 45677888888999999995 56889999999 9999999999999999999999999999987654 5666677
Q ss_pred HHHHHHhhhhHHHHHHHHHHhhhcccchhhH-HHHhhhhccccchhhH--HHHHHHHhHHHHHHHHhHHHHhhhccccCC
Q 011783 125 FNTLFGLSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALG--LSTVSTAWGIGLIIGPALGGFLAQPAEKYP 201 (477)
Q Consensus 125 ~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~-~~~i~~~~~~~~r~~~--~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~ 201 (477)
+.+++++++|++.+++.|++.|.+.+...|. .+++.|+.|+++|++. .+......++|.++||.+++.+.+
T Consensus 77 ~~~~~~~~~~~~~l~~~~~~~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ig~~~~~~l~~------ 150 (375)
T TIGR00899 77 ACLLFAWNRNYFLLLVLGVLLSSFASTANPQLFALAREHADRTGREAVMFSSVMRAQISLAWVIGPPLAFWLAL------ 150 (375)
T ss_pred HHHHHHhcchHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhhhcchhhHHHHHHHHHHHhHHHHHhhhHHHHHHH------
Confidence 7888889999999999999999887777777 8888999888777755 578888899999999999999987
Q ss_pred cccccccccccccch-HHHHHHHHHhhccccccCCCCCCccchhhhhhhhhhccchhhcccCCchhhhhhcchhhHHHHH
Q 011783 202 NLFSSESLFGKFPYF-LPCLCISLFAFGETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKSLLKNWPLMSSII 280 (477)
Q Consensus 202 ~~~~~~~~~~~~~~~-~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (477)
.++|+..|...... +...+...+.+||.++++++++ + ..+.++.+++++++....
T Consensus 151 -~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~--------------------~~~~~~~~~~~~~~~~~~ 206 (375)
T TIGR00899 151 -GFGFTVMFLTAALAFVLCGVLVWLFLPSYPRGAPGAL---T--------------------RLEVRGLLASRDTRLLFV 206 (375)
T ss_pred -hcccHHHHHHHHHHHHHHHHHHHHhCCCcccCccccc---C--------------------cchhhhhhcCcchHHHHH
Confidence 45566555211111 1122222334565433211100 0 012233556666665554
Q ss_pred HHHHHHhhhhhhHHHHHHhhcCcccCCccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHH
Q 011783 281 VYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTIPLLT 360 (477)
Q Consensus 281 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 360 (477)
..++.......+....|.|..+. +|.++.+.+.+.........++.. +.+++.||+++|+.+..+..+..+...
T Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~-----~g~~~~~~g~~~~~~~~~~~~~~~-~~g~l~~r~g~~~~~~~~~~~~~~~~~ 280 (375)
T TIGR00899 207 ACTLMWGCNILYIINMPLLIIHE-----LGLPDKLAGLMMGTAAGLEIPFML-LAGYLIKRFGKRRLMLLAALAGVAFYT 280 (375)
T ss_pred HHHHHHHHHHHHHhhhHHHHHHH-----cCCCHHHHHHHHHHHHHHHHHHHH-hHHHHHHHhcchhHHHHHHHHHHHHHH
Confidence 44444333334444566665433 788898899888777767777766 889999999999988777665544443
Q ss_pred HHHHHHHhhhhhHHHHHHHHHHHHhhhhHHHHhHHHHHHhhcCCcchhhHHhHHHHHHHHHHHHHhhhHHHHHHHHhhhh
Q 011783 361 SYPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIAMTGMSLFKAAGPAGGGALFSWAQKR 440 (477)
Q Consensus 361 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~ 440 (477)
.+....+ .+ .......+.+++.+...+....+..|..|+ ++++++|+.+...++|..++|.+.|.+.+..
T Consensus 281 ~~~~~~~-----~~-~~~~~~~~~g~~~g~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~g~~~~g~~~~~~--- 350 (375)
T TIGR00899 281 GLAADNS-----LW-ALLMLQLLNAIFIGILAGIGMLYFQDLMPG-RAGAATTLYTNTGRVGWIIAGSVGGILAERW--- 350 (375)
T ss_pred HHHHHHH-----HH-HHHHHHHHHHHHHHHHHHHHHHHHHHhCcc-hhhHHHHHHHHHHHHHHHHHHHHHHHHHHhc---
Confidence 3322221 11 222233333455556667777788887775 5779999999999999999999999999987
Q ss_pred ccccCCCCchHHHHHHHHHHHHHHHHHhh
Q 011783 441 LDASFLPGSQMVFFVLNVVEAIGVLMTFK 469 (477)
Q Consensus 441 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 469 (477)
|++..|.+.+++.+++.++..+
T Consensus 351 -------g~~~~~~~~~~~~~~~~~~~~~ 372 (375)
T TIGR00899 351 -------SYHAVYWFAIVMLIVALFCLLL 372 (375)
T ss_pred -------cchhHHHHHHHHHHHHHHHHhe
Confidence 8889999988888888776654
No 48
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=100.00 E-value=5.7e-33 Score=269.92 Aligned_cols=389 Identities=12% Similarity=0.068 Sum_probs=255.9
Q ss_pred chhHHHHHHHHHHHhhhchhchHhHHHHHHHHhcccccchhhhhhhHHHHHHHHHHHHHHhhhhhhhhhhcCCchhhHHH
Q 011783 39 PITELFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMG 118 (477)
Q Consensus 39 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~Grr~~~~~~ 118 (477)
+++.+...+...++...+.....+.+|.+.+|+|.+..+ .+++.+.+.+++.+++++.|+++||+|||+++..+
T Consensus 34 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gls~~~------~g~~~~~~~~~~~~~~~~~G~l~dr~G~r~~~~~~ 107 (476)
T PLN00028 34 HMRAFHLSWISFFTCFVSTFAAAPLLPIIRDNLNLTKSD------IGNAGIASVSGSIFSRLAMGPVCDLYGPRYGSAFL 107 (476)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHH
Confidence 345566667777777777788889999999999999999 99999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhhhHHHHHHHHHHhhhcccchhhHHHHhhhhccccchhhHHHHHHHHhHHHHHHHHhHHHHhhhcc-
Q 011783 119 TASVVIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGPIKAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPA- 197 (477)
Q Consensus 119 ~~~~~i~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~- 197 (477)
.++++++.++++++++++.+++.|++.|++.+...+...+++|++|+++|++++++.....++|..+++.+.+.+....
T Consensus 108 ~~~~~~~~~~~~~~~s~~~l~~~r~l~G~~~~~~~~~~~~i~~~~~~~~rg~a~g~~~~~~~~g~~~~~~~~~~i~~~~~ 187 (476)
T PLN00028 108 LMLTAPAVFCMSLVSSATGFIAVRFFIGFSLATFVSCQYWMSTMFNGKIVGTANGIAAGWGNLGGGVTQLLMPLVFPLIK 187 (476)
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHhhHHHHHHHHHhcChhheeHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999987766555678899999999999999998888888887777665553211
Q ss_pred -ccCCcccccccccccccchHHHHHHHHHhhccccccCCCCCCccchhhhhhhhhhccchhhcccCCchhhhhhcchhhH
Q 011783 198 -EKYPNLFSSESLFGKFPYFLPCLCISLFAFGETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKSLLKNWPLM 276 (477)
Q Consensus 198 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 276 (477)
.+.....+||+.|...........+..+.+++..+..+ .+ +.+++ .+.++.+....+++.++++++|
T Consensus 188 ~~~~~~~~gWr~~f~i~g~l~l~~~l~~~~~~~~~p~~~-----~~----~~~~~---~~~~~~~~~~~~~~~~~~~~~~ 255 (476)
T PLN00028 188 DAGAPSFTAWRIAFFVPGLLHIIMGILVLTLGQDLPDGN-----YR----ELKKS---GTMPKDSFSKVLRYGVTNYRTW 255 (476)
T ss_pred hcCCcchhhhHHHHHHHHHHHHHHHHHHHHHcCcCCCCc-----hh----hHHhc---CccccccHHHHHHHHHcCchhH
Confidence 00011235555552111112222222233332211100 00 00000 0000111112356677888888
Q ss_pred HHHHHHHHHHhhhhhhHHHHHHhhcCcccCCccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcchh-------HHH
Q 011783 277 SSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIM-------VAR 349 (477)
Q Consensus 277 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-------~~~ 349 (477)
...+.+++.......+..+.|.|+.+. +|+++.+++.+.+...++.+++++ +.++++||+++|+ ...
T Consensus 256 ~~~~~~~~~~~~~~~~~~~~p~~l~~~-----~g~s~~~a~~~~~~~~~~~~ig~~-~~G~lsDr~~~r~~~~~r~~~~~ 329 (476)
T PLN00028 256 ILALTYGYSFGVELTMDNIIAEYFYDR-----FGLSLETAGAIAASFGLMNLFARP-AGGYLSDVAARRFGMRGRLWALW 329 (476)
T ss_pred HHHHHHHHHHHHHHHHHhHHHHHHHHh-----cCCCHHHHHHHHHHHHHHHHHHHh-hhHHHHHHHHHhcCcchhHHHHH
Confidence 777766655555555666777776543 799999999999999999999998 9999999998652 221
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhhhhHHHHhHHHHHHhhcCCcchhhHHhHHHHHHHHHHHHHhhhH
Q 011783 350 IAGVLTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIAMTGMSLFKAAGPAG 429 (477)
Q Consensus 350 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~ 429 (477)
....+..+.+..+.... +. . .......+.+++.....+...++..+. +++.+|++.|+.+....+|++++|.+
T Consensus 330 ~~~~l~~i~~~~~~~~~---~~--~-~~~~~~~l~~~~~~~~~~~~~~~~~~~-~~~~~g~~~g~~~~~g~lg~~i~~~l 402 (476)
T PLN00028 330 IVQTLGGVFCIWLGRAN---SL--G-AAIVVMILFSIFVQAACGATFGIVPFV-SRRSLGVISGLTGAGGNVGAVLTQLL 402 (476)
T ss_pred HHHHHHHHHHHHhcccc---hH--H-HHHHHHHHHHHHHHHhhhhhcccCccc-ChhhchhhhhhhhccccHHHHHHHHH
Confidence 22222222222221111 11 1 111111222233333344445555564 45789999999877666666666654
Q ss_pred HHHHHHHhhhhccccCCCCchHHHHHHHHHHHHHHHHHhh
Q 011783 430 GGALFSWAQKRLDASFLPGSQMVFFVLNVVEAIGVLMTFK 469 (477)
Q Consensus 430 ~g~l~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 469 (477)
.+.. .. ++|+..|++.+++.+++.++.++
T Consensus 403 ----~~~~-~~------~~y~~~f~~~~~~~~i~~~~~~~ 431 (476)
T PLN00028 403 ----FFTG-SS------YSTETGISLMGVMIIACTLPVAF 431 (476)
T ss_pred ----HHhc-CC------ccHhhHHHHHHHHHHHHHHHHHh
Confidence 3321 11 16888999998888888777765
No 49
>TIGR00898 2A0119 cation transport protein.
Probab=100.00 E-value=1.6e-33 Score=277.84 Aligned_cols=371 Identities=15% Similarity=0.141 Sum_probs=259.6
Q ss_pred hHHHHHHHHhccc---ccchhhhhhhHHHHHHHHHHHHHHhhhhhhhhhhcCCchhhHHHHHHHHHHHHHHHhhhhHHHH
Q 011783 62 PFLYFMIKDFQIA---KREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLSVNFWMA 138 (477)
Q Consensus 62 ~~~~~~~~~~~~s---~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~l 138 (477)
+..|.+.+|+|++ ..+ .+++.+++.++..+++++.|+++||+|||++++++.++.+++.+++++++|++.+
T Consensus 110 ~~~~~i~~e~~l~c~~~~~------~~~~~s~~~~g~~~g~~~~g~l~Dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~ 183 (505)
T TIGR00898 110 TFSSTIVTEWDLVCEDAWK------VDLTQSCFFVGVLLGSFVFGYLSDRFGRKKVLLLSTLVTAVSGVLTAFSPNYTVF 183 (505)
T ss_pred cccccEEEEecceechHHH------HHHHHHHHHHHHHHHHHhHHHhhhhccchHHHHHHHHHHHHHHHHHHHcccHHHH
Confidence 5678899999998 666 8999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhhcccchhhH-HHHhhhhccccchhhHHHHHHHHhHHHHHHHHhHHHHhhhccccCCcccccccccccccchH
Q 011783 139 VLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSESLFGKFPYFL 217 (477)
Q Consensus 139 ~~~r~l~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 217 (477)
++.|++.|++.+...+. .+++.|++|+++|+++.++...+..+|.+++|.++..+.+ ||+.+....+ ..
T Consensus 184 ~~~r~l~G~~~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~----wr~~~~~~~i------~~ 253 (505)
T TIGR00898 184 LVFRLLVGMGIGGIWVQAVVLNTEFLPKKQRAIVGTLIQVFFSLGLVLLPLVAYFIPD----WRWLQLAVSL------PT 253 (505)
T ss_pred HHHHHHHHhhccchHHHHHHHhheecChhhhHHHHHHHHHHHHHHHHHHHHHHHHhhH----HHHHHHHHHH------HH
Confidence 99999999999998877 9999999999999999999999999999999998876643 5554433222 22
Q ss_pred HHHHHHHHhhccccccCCCCCCccch--hhhhhhhhh----------c--cchhhcccCCchhhhhhcchhhHHHHHHHH
Q 011783 218 PCLCISLFAFGETLHRHNDDDDSCDV--SYDALESAS----------A--EVKEEEGREATPKKSLLKNWPLMSSIIVYC 283 (477)
Q Consensus 218 ~~~~~~~~~l~~~~~~~~~~~~~~~~--~~~~~~~~~----------~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (477)
....+..+.+||++++...+.+..+. ..++..... . +.++++.+.+...++++++|.++...+...
T Consensus 254 ~~~~~~~~~~~esp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 333 (505)
T TIGR00898 254 FLFFLLSWFVPESPRWLISQGRIEEALKILQRIAKINGKKLPAEVLSLSLEKDLSSSKKQYSFLDLFRTPNLRKTTLCLM 333 (505)
T ss_pred HHHHHHHHhcCCChHHHHHCCCHHHHHHHHHHHHHHcCCCCCHHHHhhhhhhhhhhccCCCcHHHHhCChHHHHHHHHHH
Confidence 23334446788988754322221111 001100000 0 000001112346778899988877665554
Q ss_pred HHHhhhhhhHHHHHHhhcCcccCCccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHH
Q 011783 284 VFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTIPLLTSYP 363 (477)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 363 (477)
+..+.........+.+.. ..+.+.. ......++..+++.+ +.+++.||+|||+.+..+.++.+++++.+.
T Consensus 334 ~~~~~~~~~~~~~~~~~~------~~~~~~~---~~~~~~~~~~i~~~~-~~~~l~dr~grr~~~~~~~~~~~~~~l~~~ 403 (505)
T TIGR00898 334 MLWFTTAFSYYGLVLDLG------NLGGNIY---LDLFISGLVELPAKL-ITLLLIDRLGRRYTMAASLLLAGVALLLLL 403 (505)
T ss_pred HHHHHHHHHHHHHhcccc------ccCCChH---HHHHHHHHHHHHHHH-HHHHHHHHhCCHHHHHHHHHHHHHHHHHHH
Confidence 433322222112222221 2444432 233344566666766 888999999999999998888777776665
Q ss_pred HHHHhhhhhHHHHHHHHHHHHhhhhHHHHhHHHHHHhhcCCcchhhHHhHHHHHHHHHHHHHhhhHHHHHHHHhhhhccc
Q 011783 364 YIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIAMTGMSLFKAAGPAGGGALFSWAQKRLDA 443 (477)
Q Consensus 364 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~ 443 (477)
+..... .+ ......++.+++....++..+.+..|.+|++.|+++.|+.+....+|++++|.+.+ +.+ .
T Consensus 404 ~~~~~~---~~-~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~ig~~i~p~i~~-~~~-~------ 471 (505)
T TIGR00898 404 FVPVDL---YF-LRTALAVLGKFGITSAFQMVYLYTAELYPTVVRNLGVGVCSTMARVGSIISPFLVY-LGE-K------ 471 (505)
T ss_pred HcCCCc---hH-HHHHHHHHHHHHHHHHHHHHHHHhcccccHHHHhhhHhHHHHHHHHHHHHHhHHHH-HHH-H------
Confidence 543211 11 12222233345556667788889999999999999999999999999999999988 433 3
Q ss_pred cCCCCchHHHHHHHHHHHHHHHHHhhhhhhccC
Q 011783 444 SFLPGSQMVFFVLNVVEAIGVLMTFKPFLAQRH 476 (477)
Q Consensus 444 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 476 (477)
++..++.+.+++.+++.++.++ +||++
T Consensus 472 ----~~~~~~~~~~~~~~~~~~~~~~--lpet~ 498 (505)
T TIGR00898 472 ----WLFLPLVLFGGLALLAGILTLF--LPETK 498 (505)
T ss_pred ----HHhhHHHHHHHHHHHHHHHHHc--CcCCC
Confidence 3456777777777777666655 66654
No 50
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=100.00 E-value=7.9e-33 Score=269.79 Aligned_cols=403 Identities=14% Similarity=0.122 Sum_probs=275.9
Q ss_pred CCchhHHHHHHHHHHHhhhchhchHhHHHHHHH----------------------HhcccccchhhhhhhHHHHHHHHHH
Q 011783 37 GLPITELFSIWIIVLCTALPISSLFPFLYFMIK----------------------DFQIAKREEDIGSYAGYVGSSFMFG 94 (477)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------------~~~~s~~~~~~~~~~g~~~s~~~~~ 94 (477)
+.++....++++...+++.++..++...+.+.+ |++.+..+ .|++.+++.++
T Consensus 15 ~~r~~i~~~~~~~~~~~y~dr~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~------~g~~~s~~~~~ 88 (465)
T TIGR00894 15 SFRLFLSFLLHICNVIIIAQRICLSLTMVAMVNKENSTDLACLSAENELDNIKNPNFKWSGAL------QGLILSSHFYG 88 (465)
T ss_pred CcHHHHHHHHHHHHHHHHHHHhhheEEEEEcccCCCCCCccccccccccccccCCCCCCCHHH------hhHHHHHHHHH
Confidence 444555667777777888888888877777766 77888888 99999999999
Q ss_pred HHHHhhhhhhhhhhcCCchhhHHHHHHHHHHHHHHHhh--hhHHHHHHHHHHhhhcccchhhH-HHHhhhhccccchhhH
Q 011783 95 RALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLS--VNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALG 171 (477)
Q Consensus 95 ~~~~~~~~G~l~Dr~Grr~~~~~~~~~~~i~~~~~~~~--~~~~~l~~~r~l~G~~~g~~~~~-~~~i~~~~~~~~r~~~ 171 (477)
+.+++++.|+++||+|||+++..+.++++++.+++.++ .+++.+++.|+++|++.+...|. ..+++|++|+++|+++
T Consensus 89 ~~~~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~~~G~~~~~~~~~~~~~~~~~~~~~~r~~~ 168 (465)
T TIGR00894 89 QIIIQIPVGYLAGKYVFKWSIGIGMFLSSVISIVIPWAAGGGIALVVFCRVIQGLAQGSVSPATHKIIVKWAPPKERSRL 168 (465)
T ss_pred HHHHHcchHHHHHHhCcchhhHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHhcccchhhHHHHHHhcCCHHHHHHH
Confidence 99999999999999999999999999999998887554 56889999999999999998888 9999999999999999
Q ss_pred HHHHHHHhHHHHHHHHhHHHHhhhccccCCcccccccccccccchHHHHHHHHHhhccccccCCCCCCccchhhhhhhhh
Q 011783 172 LSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSESLFGKFPYFLPCLCISLFAFGETLHRHNDDDDSCDVSYDALESA 251 (477)
Q Consensus 172 ~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 251 (477)
+++...+..+|..++|++++.+.+...+||+.|....++ .+...++.....+|.|+..+..+++++ +..++.
T Consensus 169 ~~~~~~~~~~g~~i~~~l~~~l~~~~~gw~~~f~i~~~~-----~~~~~~~~~~~~~~~p~~~~~~~~~~~---~~i~~~ 240 (465)
T TIGR00894 169 LGMSTSGFQLGTFIFLPISGWLCESWGGWPMIFYVFGIV-----GCAWSLLWFVFPADDPSIHPCISKFEK---KYINSS 240 (465)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccCCCCeehhhhhHH-----HHHHHHHHHHHhcCCcccCCCCCHHHH---HHHHhh
Confidence 999999999999999999999887312444444322211 111112222233344432211111100 111111
Q ss_pred hccchhhcccCCchhhhhhcchhhHHHHHHHHHHHhhhhhhHHHHHHhhcCcccCCccccchhhhHHHHHHHHHHHHHHH
Q 011783 252 SAEVKEEEGREATPKKSLLKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQ 331 (477)
Q Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~ 331 (477)
.+ .++++.+.+..++++++++.++...+..++.......+..+.|.|+.+. +|++..+.++..+...++..++.
T Consensus 241 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~l~~~-----~g~s~~~~g~~~~~~~~~~~i~~ 314 (465)
T TIGR00894 241 LQ-GQKGSTRQSLPIKAIPKSLPVWAIWFAIFGHFWLYTILPTYLPTFISWV-----LRVSGKENGLLSSLPYLFAWLCS 314 (465)
T ss_pred cc-cccCCCCCCCCHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----hCcChHHhHHHHHHHHHHHHHHH
Confidence 01 1111112234578899999999998888888887778888889887654 78999999999999999999998
Q ss_pred HHHHHHHHHhhcchhHH------HHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhhhhHHHHhHHHHHHhhcCCc
Q 011783 332 LSLYPFLERILGPIMVA------RIAGVLTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVDQ 405 (477)
Q Consensus 332 ~~~~~~l~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 405 (477)
. +.+++.||.++|+.. .....+.........+.......... ...+...+.+.+.....+.......+..|
T Consensus 315 ~-~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~~- 391 (465)
T TIGR00894 315 I-FAGYLADFLKSSKTLSLTAARKIFNGIGGLGPGIFAYALPYLSAAFY-LTIIILTLANAVSSGPLAGVLINSLDLAP- 391 (465)
T ss_pred H-HHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHcCCchH-HHHHHHHHHHHHhhhhhhhhhhchhhcCh-
Confidence 8 899999987543211 01111111111111111111001111 11222222223333334444455556665
Q ss_pred chhhHHhHHHHHHHHHHHHHhhhHHHHHHHHhhhhccccCCCCchHHHHHHHHHHHHHHHHHhh
Q 011783 406 DQRGAANGIAMTGMSLFKAAGPAGGGALFSWAQKRLDASFLPGSQMVFFVLNVVEAIGVLMTFK 469 (477)
Q Consensus 406 ~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 469 (477)
+.+|.+.|+.+..+.+++.++|.+.|.+.+..... +|..+|.+.+++.+++.++...
T Consensus 392 ~~~g~~~g~~~~~~~l~~~i~p~l~g~~~~~~~~~-------~~~~~f~~~~~~~~i~~i~~~~ 448 (465)
T TIGR00894 392 RFLGFIKGITGLPGFIGGLIASTLAGNILSQDSKN-------VWLIVFLIMAFVNILCVIFYLI 448 (465)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHhhheeeCCCCch-------HHHHHHHHHHHHHHHHHHHeee
Confidence 58999999999999999999999999887643111 4788999988888888776654
No 51
>PRK10054 putative transporter; Provisional
Probab=100.00 E-value=2.5e-32 Score=259.48 Aligned_cols=373 Identities=14% Similarity=0.143 Sum_probs=275.4
Q ss_pred hHHHHHHHHHHHhhhchhchHhHHH-HHHHHhcccccchhhhhhhHHHHHHHHHHHHHHhhhhhhhhhhcCCchhhHHHH
Q 011783 41 TELFSIWIIVLCTALPISSLFPFLY-FMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGT 119 (477)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~s~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~Grr~~~~~~~ 119 (477)
|.++.+....++...+.+...+.+| ++.+++|.+..+ +|++.+.+.++..+++++.|+++||+|||+++.++.
T Consensus 7 ~~~~~l~~~~~~~~~g~~~~~~~l~~~l~~~~g~s~~~------~g~~~s~~~~~~~~~~~~~G~l~Dr~g~k~~~~~~~ 80 (395)
T PRK10054 7 RSTSALLASSLLLTIGRGATLPFMTIYLSRQYSLSVDL------IGYAMTIALTIGVVFSLGFGILADKFDKKRYMLLAI 80 (395)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHH------HHHHHHHHHHHHHHHHHHHHHHHhhcCcchhHHHHH
Confidence 4466777788888899899999887 556789999999 999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhhhHHHHHHHHHHhhhcccchhhH-HHHhhhhccccchhhHHHHHHHHhHHHHHHHHhHHHHhhhccc
Q 011783 120 ASVVIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAE 198 (477)
Q Consensus 120 ~~~~i~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~ 198 (477)
++..++.++.+++++++.+++.|++.|.+.+...+. .++..|.+|+++|++++++.+...++|..+||.+++++.+ .
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~lg~~igp~l~~~l~~--~ 158 (395)
T PRK10054 81 TAFASGFIAIPLVNNVTLVVLFFALINCAYSVFSTVLKAWFADNLSSTSKTKIFSLNYTMLNIGWTVGPPLGTLLVM--Q 158 (395)
T ss_pred HHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--h
Confidence 999999999999999999999999988877777777 9999999999999999999999999999999999998875 2
Q ss_pred cCCcccccccccccccchHHH-HHHHHHhhccccccCCCCCCccchhhhhhhhhhccchhhcccCCchhhhhhcchhhHH
Q 011783 199 KYPNLFSSESLFGKFPYFLPC-LCISLFAFGETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKSLLKNWPLMS 277 (477)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 277 (477)
+|+..|... ...... .+...+.+|+.+++++ ++.+ ...+.++.+|+|+++.
T Consensus 159 g~~~~f~~~------~~~~~i~~i~~~~~~~~~~~~~~---~~~~-------------------~~~~~~~~~~~~~~~~ 210 (395)
T PRK10054 159 SINLPFWLA------AICSAFPLVFIQIWVQRSEKAIA---TETG-------------------SVWSPSVLLQDKALLW 210 (395)
T ss_pred ccCcHHHHH------HHHHHHHHHHHHHHHhccccccc---cchh-------------------hhhhhhhhccCceehH
Confidence 344333211 111111 1122223443321110 0000 0012356788898887
Q ss_pred HHHHHHHHHhhhhhhHHHHHHhhcCcccCCccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHH
Q 011783 278 SIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTIP 357 (477)
Q Consensus 278 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 357 (477)
.....++.......+..+.+.|.... .+.+.+....+.......+.....+. ..+++.||.++|+.+..+..+..+
T Consensus 211 ~~~~~~l~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~g~~~~~~~~~~~~~~~-~~g~~~~~~~~~~~l~~~~~~~~~ 286 (395)
T PRK10054 211 FTCSGFLASFVSGAFASCISQYVMVV---ADSDFAEKVVAVVLPVNAAMVVSLQY-SVGRRLNAANIRPLMTAGTLCFVI 286 (395)
T ss_pred HHHHHHHHHHHHHHhhhhHHHHHHHh---cccchHHHHHHHHHHhhhhheeeehh-HHHHHHccCCchhHHHHHHHHHHH
Confidence 77766665555545545556555432 23566777788888887777777766 677888999999988888777766
Q ss_pred HHHHHHHHHHhhhhhHHHHHHHHHHHHhhhhHHHHhHHHHHHhhcCCcchhhHHhHHHHHHHHHHHHHhhhHHHHHHHHh
Q 011783 358 LLTSYPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIAMTGMSLFKAAGPAGGGALFSWA 437 (477)
Q Consensus 358 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~ 437 (477)
+...+..... +. + .......+.+++.....|.....+.+..|++.++++.+..+ ...+|..+||.++|.++|+.
T Consensus 287 ~~~~~~~~~~--~~--~-~~~~~~~~~~~g~~~~~p~~~~~~~~~~p~~~~~~~~~~~~-~~~~G~~~Gp~~~G~l~~~~ 360 (395)
T PRK10054 287 GLVGFIFSGN--SL--L-LWGMSAAVFTVGEIIYAPGEYMLIDHIAPPGMKASYFSAQS-LGWLGAAINPLVSGVILTTL 360 (395)
T ss_pred HHHHHHHcch--HH--H-HHHHHHHHHHHHHHHHHhhHHHHHHHhCCcccceehHhHHH-HHHHHHHHHHHHHHHHHHHc
Confidence 6655543221 11 1 12223334455666667787888999999999999998755 67799999999999999998
Q ss_pred hhhccccCCCCchHHHHHHHHHHHHHHHHHhh
Q 011783 438 QKRLDASFLPGSQMVFFVLNVVEAIGVLMTFK 469 (477)
Q Consensus 438 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 469 (477)
|+...|.+.+.+..++.++..+
T Consensus 361 ----------g~~~~~~~~~~~~~~~~~~~~~ 382 (395)
T PRK10054 361 ----------PPWSLFVILALAIVAAWLLMLK 382 (395)
T ss_pred ----------ChhhHHHHHHHHHHHHHHHHHh
Confidence 7888888887777777776664
No 52
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.8e-33 Score=249.99 Aligned_cols=389 Identities=14% Similarity=0.130 Sum_probs=306.1
Q ss_pred CCCCchhHHHHHHHHHHHhhhchhchHhHHHHHHHHhcccccchhhhhhhHHHHHHHHHHHHHHhhhhhhhhhhcCCchh
Q 011783 35 KSGLPITELFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPV 114 (477)
Q Consensus 35 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~Grr~~ 114 (477)
.++..+|.+++-++...+.+....+.+++.+.+.+|+|+|++| .+++.++..+...+..++.|.+.||+|.|++
T Consensus 8 ~k~~~~~~L~~S~~af~v~F~VW~l~s~l~~~i~~~~~LS~~q------~~ll~aiPil~GallRl~~g~l~drfGgR~~ 81 (417)
T COG2223 8 GKRIARRNLWLSTLAFDVGFMVWTLFSPLGVFIKSDFGLSEGQ------KGLLVAIPILVGALLRLPYGFLTDRFGGRKW 81 (417)
T ss_pred cccchhHHHHHHHHHHHHHHHHHHHHHHHHhhhccccCCCHHH------HHHHHHHHHHHhHHHHHHHHhhhcccCchHH
Confidence 3455567888888888888999999999999999999999999 9999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHhhhh---HHHHHHHHHHhhhcccchhhHHHHhhhhccccchhhHHHHHHHHhHHHHHHHHhHHH
Q 011783 115 IIMGTASVVIFNTLFGLSVN---FWMAVLTRFLLGSLNGLLGPIKAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGG 191 (477)
Q Consensus 115 ~~~~~~~~~i~~~~~~~~~~---~~~l~~~r~l~G~~~g~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~ 191 (477)
...+.++..+-.+..+++.+ ++++++.+++.|++.+.+....+++++++|+|++|.++|++. ..++|..+...++.
T Consensus 82 ~~~s~~l~~IP~~~~~~a~~~~~~~~ll~~gll~G~~GasFav~m~~~s~~fP~~~qG~AlGI~g-~GN~G~av~q~~~P 160 (417)
T COG2223 82 TILSMLLLLIPCLGLAFAVTYPSTWQLLVIGLLLGLAGASFAVGMPNASFFFPKEKQGLALGIAG-AGNLGVAVAQLVAP 160 (417)
T ss_pred HHHHHHHHHHHHHHHHHHccCCchHHHHHHHHHHhcccceehcccccccccCChhhhhHHHHHhc-cccccHHHHHHHHH
Confidence 99999999999999998864 459999999999999999888999999999999999999999 99999999999999
Q ss_pred HhhhccccCCcccc---ccccccc-ccchHHHHHHHHHhhccccccCCCCCCccchhhhhhhhhhccchhhcccCCchhh
Q 011783 192 FLAQPAEKYPNLFS---SESLFGK-FPYFLPCLCISLFAFGETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKK 267 (477)
Q Consensus 192 ~l~~~~~~~~~~~~---~~~~~~~-~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (477)
.+.. .++ |+.+-.. .+..++..+...+.+-+.+..+...++. .+...+
T Consensus 161 ~v~~-------~~g~~~w~~~~~i~~~~l~v~~v~~~~~~~d~p~~r~~~~~~---------------------~~~~~~ 212 (417)
T COG2223 161 LVAV-------AFGFLAWRNVAGIYVVALAIAAVLAWLGMNDVPEHRASVKPQ---------------------LPAQLK 212 (417)
T ss_pred HHHH-------HHhhHHHHHHHHHHHHHHHHHHHHHHHHhCCChhhhcccccc---------------------chhHHH
Confidence 8887 444 5544311 1112222333333443333321111110 013567
Q ss_pred hhhcchhhHHHHHHHHHHHhhhhhhHHHHHHhhcCcccCCccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcchhH
Q 011783 268 SLLKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMV 347 (477)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 347 (477)
.++++++.|.+.+.|+..+....++..++|.|+.+. ++.++.++|.......+.+.+.+. ++|+++||+|.+|.
T Consensus 213 ~v~~~~~~W~lsllY~~tFG~Fvgfs~~l~~~~~~~-----fg~~~~~Ag~~a~~f~~~g~l~Rp-~GG~LsDR~Gg~rv 286 (417)
T COG2223 213 AVFSNKDTWLLSLLYFATFGGFVGFSAYLPMYLVTQ-----FGLSPVTAGLIAFLFPLIGALARP-LGGWLSDRIGGRRV 286 (417)
T ss_pred HHhcCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHh-----cCCChhhHHHHHHHHHHHHHHHHh-ccchhhhhccchhH
Confidence 788999999999999999999999999999999876 999999999999999999999999 99999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhh-hhHHHHHHHHHHHHhhhhHHHHhHHHHHHhhcCCcchhhHHhHHHHHHHHHHHHHh
Q 011783 348 ARIAGVLTIPLLTSYPYIAMLSG-FGLAFLLNCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIAMTGMSLFKAAG 426 (477)
Q Consensus 348 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~ 426 (477)
+...+..+.++.....+...... ...........+...++.+.-....+.++..++| ++.|.+.|+...++.+|++.-
T Consensus 287 ~~~~f~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~l~~~~G~GnGsvfk~Ip~if~-~~~G~v~G~vga~G~lGGf~l 365 (417)
T COG2223 287 TLAVFVGMALAAALLSLFLTGFGHGGSFVVFVAVFLALFVFAGLGNGSVFKMIPVIFP-KETGAVTGIVGAIGGLGGFFL 365 (417)
T ss_pred HHHHHHHHHHHHHHHHccccccccCcchHHHHHHHHHHHHHhccCcchheeechHHHH-hhhhHHHHHHHHhccccccch
Confidence 98888888887776665542221 0111122222222233344444455556666665 579999999999999999999
Q ss_pred hhHHHHHHHHhhhhccccCCCCchHHHHHHHHHHHHHHHHHhhhhhhc
Q 011783 427 PAGGGALFSWAQKRLDASFLPGSQMVFFVLNVVEAIGVLMTFKPFLAQ 474 (477)
Q Consensus 427 ~~~~g~l~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 474 (477)
|...|..++.++ .++..|++...+.+++.+.....+.|+
T Consensus 366 p~~~g~~~~~tg---------~~~~~f~~~~~~~~~a~v~~~~~y~r~ 404 (417)
T COG2223 366 PLAFGVSLDLTG---------SYTGAFMLLLAFYLVALVLTWALYARR 404 (417)
T ss_pred hHHHHHHHHhcc---------cHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 999999999882 377899999999888888776644443
No 53
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=100.00 E-value=1.2e-31 Score=256.17 Aligned_cols=374 Identities=15% Similarity=0.144 Sum_probs=258.0
Q ss_pred HHHHHHHHhhhchhchHhHHHHHHHHhcccccchhhhhhhHHHHHHHHHHHHHHhhhhhhhhhhcCCchhhHHHHHHHHH
Q 011783 45 SIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVI 124 (477)
Q Consensus 45 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~Grr~~~~~~~~~~~i 124 (477)
.+.+..+...++..++.|.+|.+.+++|.+..+ .++..+++.+++.++++++|+++||+|||++++.+.+++++
T Consensus 20 ~~~~~~~~~~~~~~~~~p~l~~i~~~~~~~~~~------~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~ 93 (413)
T PRK15403 20 ALILYDFAAYLTTDLIQPGIINVVRDFNADVSL------APASVSLYLAGGMALQWLLGPLSDRIGRRPVLITGALIFTL 93 (413)
T ss_pred HHHHHHHHHHHHHHhhccCHHHHHHHhCCCHHH------HHHHHHHHHHHHHHHHHhhhHHHHHcCchHHHHHHHHHHHH
Confidence 345556667778889999999999999999999 99999999999999999999999999999999999999999
Q ss_pred HHHHHHhhhhHHHHHHHHHHhhhcccchhhH-HHHhhhhccccchhhHHHHHHHHhHHHHHHHHhHHHHhhhccccCCcc
Q 011783 125 FNTLFGLSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNL 203 (477)
Q Consensus 125 ~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~ 203 (477)
+.+++++++|++.++++|+++|++.+...+. .+++.|++|+++|++++++......+|..+||.+++.+.+ .
T Consensus 94 ~~~~~~~a~~~~~l~~~r~l~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lg~~l~~-------~ 166 (413)
T PRK15403 94 ACAATLFTTSMTQFLIARFIQGTSICFIATVGYVTVQEAFGQTKGIKLMAIITSIVLVAPIIGPLSGAALMH-------F 166 (413)
T ss_pred HHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------h
Confidence 9999999999999999999999998776666 8889999999999999999999999999999999999887 3
Q ss_pred cccccccccccch-HHHHHHHHHhhccccccCCCCCCccchhhhhhhhhhccchhhcccCCchhhhhhcchhhHHHHHHH
Q 011783 204 FSSESLFGKFPYF-LPCLCISLFAFGETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKSLLKNWPLMSSIIVY 282 (477)
Q Consensus 204 ~~~~~~~~~~~~~-~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 282 (477)
++||..|...... .+..+...+.+||+++.+++ +.+ ..+..+..++++|||.++...+..
T Consensus 167 ~gw~~~f~~~~~~~~i~~~~~~~~lp~~~~~~~~---~~~----------------~~~~~~~~~~ll~~~~~~~~~l~~ 227 (413)
T PRK15403 167 VHWKVLFAIIAVMGLIAFVGLLLAMPETVKRGAV---PFS----------------AKSVLRDFRNVFRNRLFLTGAATL 227 (413)
T ss_pred cCHHHHHHHHHHHHHHHHHHHHHhCCCCccccCC---CCC----------------hHHHHHHHHHHHcCHHHHHHHHHH
Confidence 4555554211111 11222223345665331110 000 001123567888999999888777
Q ss_pred HHHHhhhhhhHHHHHHhhcCcccCCccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHH
Q 011783 283 CVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTIPLLTSY 362 (477)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 362 (477)
.+.......+....|.++.+. +|+++.+.++.......+.+++..+...++.|+.++| .......+..++..++
T Consensus 228 ~~~~~~~~~~~~~~P~~l~~~-----~g~s~~~~gl~~~~~~~~~~i~~~l~~~~~~~~~~~~-~~~~~~~~~~ig~~l~ 301 (413)
T PRK15403 228 SLSYIPMMSWVAVSPVILIDA-----GGMTTSQFAWTQVPVFGAVIVANAIVARFVKDPTEPR-FIWRAVPIQLVGLALL 301 (413)
T ss_pred HHHHHHHHHHHHhChHHHHHh-----cCCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCCchh-HHHHHHHHHHHHHHHH
Confidence 776666666666777776654 7899999999888777888887773444444544433 3322222223332222
Q ss_pred HHHHHhhhhhHHHHHHHHHHHHhhhhHHHHhHHHHHHhhcCCcchhhHHhHHHHHHHHHHHHHhhhHHHHHHHHhhhhcc
Q 011783 363 PYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIAMTGMSLFKAAGPAGGGALFSWAQKRLD 442 (477)
Q Consensus 363 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~ 442 (477)
........ ..+........+.+.+.+...|......-. -....+|++.++.+.....+..+++.+.|++.++.
T Consensus 302 ~~~~~~~~-~~~~~~~~~~~l~~~G~~~~~p~~~~~al~-~~~~~~G~a~a~~~~~~~~~~~~~~~~~g~~~~~~----- 374 (413)
T PRK15403 302 IVGNLLWP-HVWLWSVLGTSLYAFGIGLIFPTLFRFTLF-SNNLPKGTVSASLNMVILMVMAVSVEIGRWLWFNG----- 374 (413)
T ss_pred HHHHHHcc-ccHHHHHHHHHHHHHHHHHHhHHHHHHHhc-cCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHcC-----
Confidence 22110001 112112233333345555566665543222 22335799999999999999999999999887763
Q ss_pred ccCCCCchHHHHHHHHHHHHHHHHHhh
Q 011783 443 ASFLPGSQMVFFVLNVVEAIGVLMTFK 469 (477)
Q Consensus 443 ~~~~~g~~~~~~~~~~~~~~~~~~~~~ 469 (477)
-...|...++++.+.....+.
T Consensus 375 ------~~~~~~~~~~~~~~~~~~~~~ 395 (413)
T PRK15403 375 ------GRLPFHLLAVVAGVIVVFTLA 395 (413)
T ss_pred ------CchHHHHHHHHHHHHHHHHHH
Confidence 334555555554444444333
No 54
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=100.00 E-value=1e-32 Score=259.90 Aligned_cols=347 Identities=24% Similarity=0.340 Sum_probs=259.2
Q ss_pred HHHHHHHhhhchhchHhHHH-HHHHHhcccccchhhhhhhHHHHHHHHHHHHHHhhhhhhhhhhcCCchhhHHHHHHHHH
Q 011783 46 IWIIVLCTALPISSLFPFLY-FMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVI 124 (477)
Q Consensus 46 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~s~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~Grr~~~~~~~~~~~i 124 (477)
+++..++..++.....+.+| .+.+++|.+..+ .+++.+++.++..+++++.|+++||+|||+++..+.++.++
T Consensus 1 L~l~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~------~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~l~~~~~~~~~ 74 (352)
T PF07690_consen 1 LFLAFFLSGFGFSIISPALPLYLAEELGLSPSQ------IGLLFSAFFLGSALFSPFAGYLSDRFGRRRVLIIGLLLFAL 74 (352)
T ss_dssp HHHHHHHHHHHHHHHHHHHH-HHHCCSTTTSHC------HHHHHHHHHHHHHHHHHHHHHHHHHS-HHHHHHHHHHHHHH
T ss_pred CcHHHHHHHHHHHHHHHHHHHHHHHccCCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHcCCeeeEeehhhhhhh
Confidence 35677888888899999999 899999999999 99999999999999999999999999999999999999999
Q ss_pred HHHHHHhhhhHHHHHHHHHHhhhcccchhhH-HHHhhhhccccchhhHHHHHHHHhHHHHHHHHhHHHHhhhccccCCcc
Q 011783 125 FNTLFGLSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNL 203 (477)
Q Consensus 125 ~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~ 203 (477)
+.++..+++|++.+++.|++.|++.+...+. .+++.|++|+++|++++++.+....+|..++|.+++.+.+ .
T Consensus 75 ~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~-------~ 147 (352)
T PF07690_consen 75 GSLLLAFASNFWLLLIARFLLGIGSGFFSPASNALIADWFPPEERGRAFGILSAGFSLGSILGPLLGGFLIS-------Y 147 (352)
T ss_dssp HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCTCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC-------H
T ss_pred HHHHhhhhhhHHHHhhhccccccccccccccccccccccchhhhhhhccccccchhhhhhhcccchhhhhhh-------c
Confidence 9776667788889999999999999998888 9999999999999999999999999999999999999986 4
Q ss_pred cccccccccccchHHHH-HHHHHhhccccccCCCCCCccchhhhhhhhhhccchhhcccCCc-hhhhhhcchhhHHHHHH
Q 011783 204 FSSESLFGKFPYFLPCL-CISLFAFGETLHRHNDDDDSCDVSYDALESASAEVKEEEGREAT-PKKSLLKNWPLMSSIIV 281 (477)
Q Consensus 204 ~~~~~~~~~~~~~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 281 (477)
++|+..+.......... ++....+++.+++++.++++++. ++++++.. ..+.+.+++.+|.....
T Consensus 148 ~~~~~~~~~~~~~~~~~~il~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~ 214 (352)
T PF07690_consen 148 FGWRWAFLISAILSLIAAILFILFLPEPPPPRERESPKESE-------------SKKPKPLKPGFKSLFKNPVLWILLIA 214 (352)
T ss_dssp CHHCCHHHHHHHHHHHHHHHHHCCC---STTTT--SSTTTT---------------HHHCCCH-CTHHHHHHCCHHHHHH
T ss_pred cccccccccccchhhhhhhhHhhhhhhcccccccccccccc-------------cccccccccccccccccchhhhhhhh
Confidence 45555541111111111 11112333333322222111110 00111122 36777777877755555
Q ss_pred HHHHHhhhhhhHHHHHHhhcCcccCCccccc-hhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHH
Q 011783 282 YCVFSLHDMAYSEIFSLWANSPKKLGGLNYS-TQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTIPLLT 360 (477)
Q Consensus 282 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~-~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 360 (477)
.++..+.......+.|.|+.+. +|++ ..+.+.......+...++.. +.+++.||+++++..........+...
T Consensus 215 ~~~~~~~~~~~~~~~~~~l~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~~~~~~~~~~~~~~~~~~~~ 288 (352)
T PF07690_consen 215 FFLFFFVFSGFSFFLPLYLQEV-----LGFSGPSQAGLLFSIFGIVGIIGSL-LAGRLSDRFGRRRRLLIAILLLILGAL 288 (352)
T ss_dssp HHHHHHHHHHHHHHHHHHCCHH-----HHCCTHHHHHHHHHHHHHHHHHHHH-HHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHhhcccchhhhhc-----cCCCHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHcCcHHHHHHHHHHHHHHHH
Confidence 5555555566777788775544 7888 78999999999999999988 889999999988777777766666665
Q ss_pred HHHHHHHhhhhhHHHHHHHHHHHHhhhhHHHHhHHHHHHhhcCCcchhhHHhHHHHHHHHHHHHHhh
Q 011783 361 SYPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIAMTGMSLFKAAGP 427 (477)
Q Consensus 361 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~ 427 (477)
.+.......+. ........+.+++.+...+....+..+.+|++++|++.|+.+...+++..++|
T Consensus 289 ~~~~~~~~~~~---~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~igP 352 (352)
T PF07690_consen 289 GLLLLPFSSSP---VWLIIALFLIGFGFGIVFPILFSLIQELVPPEYRGTAFGLFNSIGSLGGIIGP 352 (352)
T ss_dssp HHCCSHHHCHH---HHHHHHHHHHHHHHHHHCHHHHHHHHCCCHTCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhhhH---HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHCC
Confidence 55544443111 12222334456677778899999999999999999999999999999999987
No 55
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=100.00 E-value=2.3e-31 Score=252.44 Aligned_cols=365 Identities=14% Similarity=0.112 Sum_probs=274.5
Q ss_pred HHHHHHHHHhhhchhchHhHHHHHHHHhcccccchhhhhhhHHHHHHHHHHHHHHhhhhhhhhhhcCCchhhHHHH-HHH
Q 011783 44 FSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGT-ASV 122 (477)
Q Consensus 44 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~Grr~~~~~~~-~~~ 122 (477)
..+.+..+..++..++..|.+|.+.+|+|.+..+ +|++.+++.+...++++++|+++||+|||+...... ...
T Consensus 7 ~~l~~~~~~~~~~~~~~~p~l~~~l~~~g~s~~~------ig~~~s~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~ 80 (382)
T TIGR00902 7 RWLALGFFGYFCAYGIFLPFFPAWLKGIGLGEEM------IGLLIGAALIARFAGGLFFAPLIKDANHIIIALRLLALAS 80 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHH
Confidence 4466777888888899999999999999999999 999999999999999999999999999854332221 111
Q ss_pred HHHH-HHHHhhhhHHHHHHHHHHhhhcccchhhH-HHHhhhhccccchhhHHHHHHHHhHHHHHHHHhHHHHhhhccccC
Q 011783 123 VIFN-TLFGLSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKY 200 (477)
Q Consensus 123 ~i~~-~~~~~~~~~~~l~~~r~l~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~ 200 (477)
.+.. ..+..+++++.+++.|+++|.+.+...|. .++..|+ +++|++++|......++|.+++|++++.+.+
T Consensus 81 ~l~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~p~~~al~~~~--~~~~~~~~g~~~~~~slG~~~g~~l~g~l~~----- 153 (382)
T TIGR00902 81 AIFAAAFSAGAHNAWLLFIAIGLFALFFSAGMPIGDALANTW--QKQFGLDYGKVRLIGSAAFIIGSALFGGLIG----- 153 (382)
T ss_pred HHHHHHHHHhhhhHHHHHHHHHHHHHHHccchhHHHHHHHHH--HHHcCCCccHHHHHHHHHHHHHHHHHHHHHH-----
Confidence 1222 24446789999999999999987777777 7776554 5789999999999999999999999999998
Q ss_pred CcccccccccccccchHHHHHHHHHhhccccccCCCCCCccchhhhhhhhhhccchhhcccCCchhhhhhcchhhHHHHH
Q 011783 201 PNLFSSESLFGKFPYFLPCLCISLFAFGETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKSLLKNWPLMSSII 280 (477)
Q Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (477)
.++|+..|.... ......+..+.+++.+++++ +++.+ +.+.....++++|+|+++...+
T Consensus 154 --~~g~~~~f~~~~-~~~~~~~~~~~~~~~~~~~~--~~~~~----------------~~~~~~~~~~~l~~~~~~~~l~ 212 (382)
T TIGR00902 154 --MFDEQNILAILT-AGLAFMLIGFLIKPTIPPKD--AIPED----------------ESQGDSAFIALLKNPMNLRFLA 212 (382)
T ss_pred --HcChhHHHHHHH-HHHHHHHHHHHcCCCCCCCc--ccccc----------------ccccchhHHHHHcChHHHHHHH
Confidence 556666552111 11111122222222211110 00000 1111234678899999999888
Q ss_pred HHHHHHhhhhhhHHHHHHhhcCcccCCccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHH
Q 011783 281 VYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTIPLLT 360 (477)
Q Consensus 281 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 360 (477)
..++.......+..+.+.|.++ .|.++.+.|.+.....+..++... +.+++.||+++|+.+..+.+...+...
T Consensus 213 ~~~l~~~~~~~~~~~~~~~l~~------~g~s~~~~g~l~~~~~~~~i~~~~-~~~~l~~r~g~~~~l~~~~~~~~~~~~ 285 (382)
T TIGR00902 213 AVCLIQGAHAAYYGFSAIYWQA------AGISASATGLLWGIGVLAEIIIFA-FSNKLFQNCSARDLLLISAIACVGRWA 285 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH------CCCCHhHHHHHHHHHHHHHHHHHH-HhHHHHhhCCHHHHHHHHHHHHHHHHH
Confidence 8888887888888888887764 799999999999988888888877 889999999999999999988888877
Q ss_pred HHHHHHHhhhhhHHHHHHHHHHHHhhhhHHHHhHHHHHHhhcCCcchhhHHhHHHHH-HHHHHHHHhhhHHHHHHHHhhh
Q 011783 361 SYPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIAMT-GMSLFKAAGPAGGGALFSWAQK 439 (477)
Q Consensus 361 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~-~~~~g~~~~~~~~g~l~~~~~~ 439 (477)
.+.+.++ ...+.....+.++..+...+....++++. |++++++.+++++. ...+|..++|.++|+++|+.
T Consensus 286 ~~~~~~~------~~~~~~~q~l~g~~~~~~~~~~~~~i~~~-~~~~~~~~q~~~~~~~~g~g~~~g~~~~G~l~~~~-- 356 (382)
T TIGR00902 286 IIGAIEA------FPLIFLLQILHCGTFAVCHLAAMRYIAAQ-PGSEIAKLQALYNALAMGGLIAIFTAFAGFIYPTL-- 356 (382)
T ss_pred HHHhHhh------HHHHHHHHHHHHHHHHHHHHHHHHHHHhC-CHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc--
Confidence 7655443 12344456777788888888888899987 99999999999875 56899999999999999998
Q ss_pred hccccCCCCchHHHHHHHHHHHHHHHHH
Q 011783 440 RLDASFLPGSQMVFFVLNVVEAIGVLMT 467 (477)
Q Consensus 440 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 467 (477)
|+ ..|...+++.+++.++.
T Consensus 357 --------g~-~~~~~~~~~~~~~~~~~ 375 (382)
T TIGR00902 357 --------GA-GTFVFMAIIAAAAFFLI 375 (382)
T ss_pred --------cH-HHHHHHHHHHHHHHHHH
Confidence 54 56777887777665543
No 56
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=100.00 E-value=2.3e-31 Score=248.55 Aligned_cols=389 Identities=20% Similarity=0.205 Sum_probs=282.7
Q ss_pred HHHhcccccchhhhhhhHHHHHHHHHHHHHHhhhhhhhhhhcCCchhhHHHHHHHHHHHHHHHh---hhhHHHHHHHHHH
Q 011783 68 IKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGL---SVNFWMAVLTRFL 144 (477)
Q Consensus 68 ~~~~~~s~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~Grr~~~~~~~~~~~i~~~~~~~---~~~~~~l~~~r~l 144 (477)
.+++|.+.++++.....+.+.+++.+|.++|++..|+++||+|||..+.++.++..++.++..+ .+++..++++|++
T Consensus 46 ~~r~g~~~s~~~~~~lwS~~vs~f~iG~~~Gs~~~~~la~~~GRK~~l~~~~~l~~~~~~~~~~s~~~~~~e~li~GR~i 125 (485)
T KOG0569|consen 46 IERYGLPLSDSTLDLLWSLIVSIFFIGGMIGSFSSGLLADRFGRKNALLLSNLLAVLAALLMGLSKSAPSFEMLILGRLI 125 (485)
T ss_pred HHhcCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHH
Confidence 3556666666667777899999999999999999999999999999999999888888777765 4689999999999
Q ss_pred hhhcccchhhH-HHHhhhhccccchhhHHHHHHHHhHHHHHHHHhHHH-HhhhccccCCcccccccccccccchHHHHHH
Q 011783 145 LGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGG-FLAQPAEKYPNLFSSESLFGKFPYFLPCLCI 222 (477)
Q Consensus 145 ~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (477)
.|+..|..... .-++.|..|++.||..-.+.+.+..+|.++|..++. .+......|++.+....+ .....++
T Consensus 126 ~Gl~~gl~~~~~pmyl~E~sP~~~RG~~g~~~~~~~~~g~ll~~~~~l~~ilGt~~~W~~l~~~~~i------~~~~~l~ 199 (485)
T KOG0569|consen 126 VGLACGLSTGLVPMYLTEISPKNLRGALGTLLQIGVVIGILLGQVLGLPSLLGTEDLWPYLLAFPLI------PALLQLA 199 (485)
T ss_pred HHHHhHHHHHHHHHHHhhcChhhhccHHHHHHHHHHHHHHHHHHHHccHHhcCCCcchHHHHHHHHH------HHHHHHH
Confidence 99999998777 999999999999999999999999999999976663 344434456555443222 2455566
Q ss_pred HHHhhccccccCCC-CCCccch--hhhhhhhh----------hccchhh--cccCCchhhhhhcchhhHHHHHHHHHHH-
Q 011783 223 SLFAFGETLHRHND-DDDSCDV--SYDALESA----------SAEVKEE--EGREATPKKSLLKNWPLMSSIIVYCVFS- 286 (477)
Q Consensus 223 ~~~~l~~~~~~~~~-~~~~~~~--~~~~~~~~----------~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 286 (477)
.+.++||+|++.-. ++++.+. ..+..+.. .++.+++ .++...+.+++++++..+......+...
T Consensus 200 ~l~~~PESPk~Ll~~k~~~~~A~~sl~~y~G~~~~~~~~e~~~~e~~~~~~~~~~~~sl~~~~~~~~lR~~~~i~~~v~~ 279 (485)
T KOG0569|consen 200 LLPFLPESPKYLLIKKGDEEEARKALKFYRGKEDVEAEIEEMLREIEEEELEKKKQISLRQLLKNPTLRRPLLIGIVVSF 279 (485)
T ss_pred HHhcCCCCcchHHHHcCCHHHHHHHHHHHhCCCcchhHHHHHHHHHHHhccccccCCcHHHHhcCcchhHHHHHHHHHHH
Confidence 77889999997443 2222221 11111111 1111111 1125567889999987776543333322
Q ss_pred hhhhhhHHHHHHhhcCcccCCccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHH
Q 011783 287 LHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTIPLLTSYPYIA 366 (477)
Q Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 366 (477)
..++.. ..+.+.+......+.|++..++-+.....++...+..+ ++.++.||.|||+++..+..++.+..+.+....
T Consensus 280 ~qq~sG--i~ai~~Yst~i~~~aG~~~~~a~~an~~~g~v~~~~t~-~~~~lid~~gRRpLll~~~~~~~~~~~~~~~~~ 356 (485)
T KOG0569|consen 280 AQQFSG--INAIFFYSTSIFKTAGFTPEEAQYANLGIGIVNLLSTL-VSPFLIDRLGRRPLLLISLSLMAVALLLMSIAL 356 (485)
T ss_pred HHHhcC--cceeHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHH-HHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHH
Confidence 222222 22222222223444799999999999999999999998 999999999999999999988888766555443
Q ss_pred Hhhhhh-H---HHHHHHHHHHHhhhhHHHHhHHHHHHhhcCCcchhhHHhHHHHHHHHHHHHHhhhHHHHHHHHhhhhcc
Q 011783 367 MLSGFG-L---AFLLNCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIAMTGMSLFKAAGPAGGGALFSWAQKRLD 442 (477)
Q Consensus 367 ~~~~~~-~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~ 442 (477)
...... . +..+.........+..+..|..+-+.+|++|++.|+.++++...+..+..++-......+.+..
T Consensus 357 ~l~~~~~~~~~y~~i~~~~~~~~~f~~G~gpi~~fi~aELf~~~~R~aa~s~~~~~~w~~~fiv~~~fp~l~~~~----- 431 (485)
T KOG0569|consen 357 FLSNSFGSWLSYLCIAAIFLFIISFAIGPGPIPWFIGAELFPQSARSAAQSVATAVNWLSNFIVGFAFPPLQNVI----- 431 (485)
T ss_pred HHHHHhhhHHHHHHHHHHHHHHHhhhcCCCchhHHHHHHhCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-----
Confidence 332222 1 2233444444556677788999999999999999999999999999999999999999998887
Q ss_pred ccCCCCchHHHHHHHHHHHHHHHHHhhhhhhccCC
Q 011783 443 ASFLPGSQMVFFVLNVVEAIGVLMTFKPFLAQRHD 477 (477)
Q Consensus 443 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 477 (477)
|. ..|+.+.+.+++..+..++ ++||+|+
T Consensus 432 -----g~-~~filF~i~~~~~~i~~~~-~lPETkg 459 (485)
T KOG0569|consen 432 -----GP-YVFILFVIPLAIFLIYLYR-YLPETKG 459 (485)
T ss_pred -----cc-hhhHHHHHHHHHHHHHHHH-hCcccCC
Confidence 44 5777777777777776665 7999874
No 57
>PRK11043 putative transporter; Provisional
Probab=100.00 E-value=6.6e-31 Score=251.61 Aligned_cols=349 Identities=17% Similarity=0.148 Sum_probs=254.2
Q ss_pred HHHHHHHHHHhhhchhchHhHHHHHHHHhcccccchhhhhhhHHHHHHHHHHHHHHhhhhhhhhhhcCCchhhHHHHHHH
Q 011783 43 LFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASV 122 (477)
Q Consensus 43 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~Grr~~~~~~~~~~ 122 (477)
+....+...+..+..+++.|.+|.+.+++|.++++ .+++.+++.++..++++++|+++||+|||+++..+.++.
T Consensus 8 ~~~~~~~~~~~~~~~~~~~p~~~~i~~~~~~s~~~------~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~ 81 (401)
T PRK11043 8 LVYLAGLSMLGFLATDMYLPAFKAIQADLQTSASA------VSASLSLFLAGFALGQLLWGPLSDRYGRKPVLLAGLSLF 81 (401)
T ss_pred HHHHHHHHHHHHHHHHHHHhhHHHHHHHHCCCHHH------HHHHHHHHHHHHHHHHHhhhhHHhhcCCcHHHHHHHHHH
Confidence 44455556667778888899999999999999999 999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhhhHHHHHHHHHHhhhcccchhhH-HHHhhhhccccchhhHHHHHHHHhHHHHHHHHhHHHHhhhccccCC
Q 011783 123 VIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYP 201 (477)
Q Consensus 123 ~i~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~ 201 (477)
.++.+++.++++++.+++.|+++|++.+...+. .+++.|++|++++++..+.......+|..++|.+++.+.+
T Consensus 82 ~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~------ 155 (401)
T PRK11043 82 ALGSLGMLWVESAAQLLVLRFVQAVGVCSAAVIWQALVIDRYPAQKANRVFATIMPLVALSPALAPLLGAWLLN------ 155 (401)
T ss_pred HHHHHHHHHhcCHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh------
Confidence 999999999999999999999999998877777 8899999999999999999999999999999999999987
Q ss_pred cccccccccccccchHHHHHHHHHhhccccccCCCCCCccchhhhhhhhhhccchhhcccCCchhhhhhcchhhHHHHHH
Q 011783 202 NLFSSESLFGKFPYFLPCLCISLFAFGETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKSLLKNWPLMSSIIV 281 (477)
Q Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 281 (477)
.++|+..+...........+..+.++|.++. +++ ++.+...++++|++.++...+.
T Consensus 156 -~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~--------------------~~~~~~~~~~~~~~~~~~~~~~ 211 (401)
T PRK11043 156 -HFGWQAIFATLFAITLLLILPTLRLKPSKKA---RKQ--------------------SQDALTFKQLLKSKTYLGNVLI 211 (401)
T ss_pred -cCChHHHHHHHHHHHHHHHHHHHHcCCCCCc---ccc--------------------chHHHHHHHHHcChhHHHHHHH
Confidence 4556555421111111111222223322110 000 0011246677888887765555
Q ss_pred HHHHHhhhhhhHHHHHHhhcCcccCCccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHH
Q 011783 282 YCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTIPLLTS 361 (477)
Q Consensus 282 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 361 (477)
..+.......+..+.|.+..+ +|+++.+.++......++.++++. ..+++.||+++++..........++...
T Consensus 212 ~~~~~~~~~~~~~~~p~~~~~------~g~s~~~~g~~~~~~~~~~~~g~~-~~~~l~~r~~~~~~~~~~~~~~~~~~~~ 284 (401)
T PRK11043 212 FAACSAAFFAWLTGSPFILEQ------MGYSPADIGLSYVPQTIAFLVGGY-GCRAALQKWGGEQLLPWLLVLFAVSVIA 284 (401)
T ss_pred HHHHHHHHHHHHHHhHHHHHH------cCCCHHHHHHHHHHHHHHHHHHHH-HHHHHHHHcCHHHHHHHHHHHHHHHHHH
Confidence 554444444555566665543 688999999888888888888887 8889999999888776665555444333
Q ss_pred HHHHHHhhhhhHHHHHHHHHHHHhhhhHHHHhHHHHHHhhcCCcchhhHHhHHHHHHHHHHHHHhhhHHHHHHHH
Q 011783 362 YPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIAMTGMSLFKAAGPAGGGALFSW 436 (477)
Q Consensus 362 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~ 436 (477)
+...........+ .......+.++..+..++.......+..| +++|++.|+.+.....++..++.+.|.+.+.
T Consensus 285 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~~~~~~~~~~~g~l~~~ 357 (401)
T PRK11043 285 IWLASLLSHPSLV-PLLIPFCVMAAANGAIYPIVVAQALRPFP-QATGKAAALQNTLQLGLCFLASLLVSALIST 357 (401)
T ss_pred HHHHHHhccCcHH-HHHHHHHHHHHHHHHHHHHHHHHHhhhCc-ccChHHHHHHHHHHHHHHHHHHHHHHHccCC
Confidence 2222211111111 22223333455666777777777666666 6799999999999999999999999988764
No 58
>TIGR00895 2A0115 benzoate transport.
Probab=100.00 E-value=1.4e-31 Score=256.45 Aligned_cols=369 Identities=19% Similarity=0.208 Sum_probs=256.1
Q ss_pred chhHHHHHHHHHHHhhhchhchHhHHHHHHHHhcccccchhhhhhhHHHHHHHHHHHHHHhhhhhhhhhhcCCchhhHHH
Q 011783 39 PITELFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMG 118 (477)
Q Consensus 39 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~Grr~~~~~~ 118 (477)
.++.+....+..+...++.....+..|.+.+++|.+..+ .+++.+.+.++..+++++.|+++||+|||+.+..+
T Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~ 88 (398)
T TIGR00895 15 QWRAIILSFLIMLMDGYDLAAMGFAAPAISAEWGLDPVQ------LGFLFSAGLIGMAFGALFFGPLADRIGRKRVLLWS 88 (398)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhHHHHhhccCCCHHH------HHHHHHHHHHHHHHHHHHhHHHHHHhhhHHHHHHH
Confidence 344555666677777778888888999999999999999 99999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhhhHHHHHHHHHHhhhcccchhhH-HHHhhhhccccchhhHHHHHHHHhHHHHHHHHhHHHHhhhcc
Q 011783 119 TASVVIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPA 197 (477)
Q Consensus 119 ~~~~~i~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~ 197 (477)
.++.+++.++..++++++.+++.|++.|++.+...+. .+++.|++|+++|++++++.+.+..+|..+++.+++.+.+
T Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~-- 166 (398)
T TIGR00895 89 ILLFSVFTLLCALATNVTQLLILRFLAGLGLGGLMPNLNALVSEYAPKRFRGTAVGLMFCGYPIGAAVGGFLAGWLIP-- 166 (398)
T ss_pred HHHHHHHHHHHHHccchHHHHHHHHHHhcccccchhhHHHHHHHHcCHHhhchhHhhHhhHHHHHHHHHHHHHHHHhh--
Confidence 9999999999999999999999999999999888887 9999999999999999999999999999999999999987
Q ss_pred ccCCccccccccccccc-chHHHHHHHHHhhccccccCCCCCCcc-chhhhhhhhhhc-----cchh--hccc-CCchhh
Q 011783 198 EKYPNLFSSESLFGKFP-YFLPCLCISLFAFGETLHRHNDDDDSC-DVSYDALESASA-----EVKE--EEGR-EATPKK 267 (477)
Q Consensus 198 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~~~~~~~~~~~~-~~~~~~~~~~~~-----~~~~--~~~~-~~~~~~ 267 (477)
.++|+..+.... ......+.....+||+++...+++++. ++..++...... +..+ ++.+ .+...+
T Consensus 167 -----~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (398)
T TIGR00895 167 -----VFGWRSLFYVGGIAPLLLLLLLMRFLPESIDFLVSKRPETVRRIVNAIAPQMQAEAQSALPEQKATQGTKRSVFK 241 (398)
T ss_pred -----cccceeehhhhhhHHHHHHHHHHHhCCCCChHHHhcCHHHHHHHHHHHHHhccccccccccccccccchhhHHHH
Confidence 344554442111 122333344455666654322111110 000000000000 0000 0001 111122
Q ss_pred hhhcch---hhHHHHHHHHHHHhhhhhhHHHHHHhhcCcccCCccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Q 011783 268 SLLKNW---PLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGP 344 (477)
Q Consensus 268 ~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~ 344 (477)
.+++++ ..+......++..........+.|.+.. ++|+++.+.+.......++.+++.+ +.+++.||+++
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~g~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~~~~ 314 (398)
T TIGR00895 242 ALFQGKTARITVLLWLLYFMLLVGVYFLTNWLPKLMV------ELGFSLSLAATGGALFNFGGVIGSI-IFGWLADRLGP 314 (398)
T ss_pred HHhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH------HcCCCHHHHHHHHHHHHHHHHHHHH-HHHHHHhhcch
Confidence 233332 2222233333333333444445553332 2788999999999999999999988 89999999998
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhhhhHHHHhHHHHHHhhcCCcchhhHHhHHHHHHHHHHHH
Q 011783 345 IMVARIAGVLTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIAMTGMSLFKA 424 (477)
Q Consensus 345 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ 424 (477)
|+.... ..+..+....+..... +. + ......++.+++.+...+...++..+.+|++.|+++.|+.+....+|.+
T Consensus 315 ~~~~~~-~~~~~~~~~~~~~~~~--~~--~-~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ 388 (398)
T TIGR00895 315 RVTALL-LLLGAVFAVLVGSTLF--SP--T-LLLLLGAIAGFFVNGGQSGLYALMALFYPTAIRATGVGWAIGIGRLGAI 388 (398)
T ss_pred HHHHHH-HHHHHHHHHHHHHHhh--CH--H-HHHHHHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHHHH
Confidence 844433 3333333222222111 11 1 2233334456677778888899999999999999999999999999999
Q ss_pred HhhhHHHHH
Q 011783 425 AGPAGGGAL 433 (477)
Q Consensus 425 ~~~~~~g~l 433 (477)
++|.+.|.+
T Consensus 389 ~g~~~~G~l 397 (398)
T TIGR00895 389 IGPILAGYL 397 (398)
T ss_pred HHHHhHHhc
Confidence 999999875
No 59
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=100.00 E-value=1.3e-30 Score=251.30 Aligned_cols=386 Identities=20% Similarity=0.205 Sum_probs=296.0
Q ss_pred CCchhHHHHHHHHHHHhhhchhchHhHHHHHHHHhcccccchhhhhhhHHHHHHHHHHHHHHhhhhhhhhhhcCCchhhH
Q 011783 37 GLPITELFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVII 116 (477)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~Grr~~~~ 116 (477)
+.+.+.+..++.+.+++.++..+....++.+..+..-|+.. ++++.++..+...+.++++|.++||++|||+++
T Consensus 6 plr~~~Fr~lw~a~~iS~lG~~~~~va~~wlv~~lt~S~~~------valv~~a~~LP~~Llsl~aG~laDr~drrrili 79 (524)
T PF05977_consen 6 PLRNRNFRRLWIAQLISNLGDWMQTVALAWLVTQLTGSPLM------VALVQAASTLPILLLSLFAGALADRFDRRRILI 79 (524)
T ss_pred cccCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHH------HHHHHHHHHHHHHHHHHHHHHHhhcccchHHHH
Confidence 34556788899999999999999999999888888888888 999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhh-----hhHHHHHHHHHHhhhcccchhhH-HHHhhhhccccchhhHHHHHHHHhHHHHHHHHhHH
Q 011783 117 MGTASVVIFNTLFGLS-----VNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALG 190 (477)
Q Consensus 117 ~~~~~~~i~~~~~~~~-----~~~~~l~~~r~l~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~ 190 (477)
.+.++.++..+..++. .+.+.+++.-++.|++.+...|+ .+++.|.+|+++..+++++.+...++..++||.++
T Consensus 80 ~~~~~~~~~~~~L~~l~~~~~~~~~~Ll~~~fl~g~~~a~~~PA~~A~ip~lV~~~~L~~A~al~s~~~niar~iGPalg 159 (524)
T PF05977_consen 80 LSQLLRALVALLLAVLAFFGLLSPWLLLILTFLLGIGSAFFNPAWQAIIPELVPKEDLPAANALNSISFNIARIIGPALG 159 (524)
T ss_pred HHHHHHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHhhHHHHHHHHHHHHHHHHhccchHH
Confidence 9998877665544432 37889999999999999999999 99999999999999999999999999999999999
Q ss_pred HHhhhccccCCcccccccccccccchHHHHHHHHHhhccccccCCCCCCccchhhhhhhhhhccchhhcccCCchhhhhh
Q 011783 191 GFLAQPAEKYPNLFSSESLFGKFPYFLPCLCISLFAFGETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKSLL 270 (477)
Q Consensus 191 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 270 (477)
|.+.. .+|....|..-.......+..+...+ ...++++.+.+.. .++.+...+.+.
T Consensus 160 G~Lva-------~~G~~~~f~inalsfl~~i~~l~~~~---~~~~~~~~~~e~~--------------~~~l~~G~ryv~ 215 (524)
T PF05977_consen 160 GILVA-------FFGAAAAFLINALSFLISILALLRWK---PPPPPSSLPRERF--------------FSALREGLRYVR 215 (524)
T ss_pred HHHHH-------HHHHHHHHHHHHHHHHHHHHHHHHcc---ccccccccchhhh--------------hhhHHHHHHHHh
Confidence 99987 45544444111111111111111111 1111111111111 122234566667
Q ss_pred cchhhHHHHHHHHHHHhhhhhhHHHHHHhhcCcccCCccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHH
Q 011783 271 KNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARI 350 (477)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 350 (477)
++|.+...+...++++.....+...+|.+..+. +|.++...|++.+..+++.+++++ +.+++.+|.++++.+..
T Consensus 216 ~~~~l~~~l~~~~~~~l~~~a~~aLlPl~a~~~-----l~~~a~~yGll~a~~gvGai~Gal-~~~~l~~~~~~~~lv~~ 289 (524)
T PF05977_consen 216 SSPPLRSVLLRSFLFNLFASAVWALLPLFARDV-----LGGGASGYGLLLAAFGVGAILGAL-LLPRLRRRLSSRRLVLL 289 (524)
T ss_pred cchHHHHHHHHHHHHHHhhhHHHHhhhHHHHHH-----hCCcHHHHHHHHHHHHHHHHHHHH-HHHHhhcccCcchhhHH
Confidence 778777666666666665566666777776654 788999999999999999999999 88899999998888888
Q ss_pred HHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhhhhHHHHhHHHHHHhhcCCcchhhHHhHHHHHHHHHHHHHhhhHH
Q 011783 351 AGVLTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIAMTGMSLFKAAGPAGG 430 (477)
Q Consensus 351 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~ 430 (477)
+.+..+++++.+.+..+. + ...+..++.|++.........+..++.+|++.||++++++.+....+..+|..+.
T Consensus 290 ~~~~~a~~~~~lal~~~~-----~-~~~~~l~l~G~~~~~~~~~~~t~~Q~~~P~~~~GRv~si~~~~~~g~~~lGsll~ 363 (524)
T PF05977_consen 290 ASLLFALALLLLALSPSF-----W-LALIALFLAGAAWIIANSSLNTLVQLSVPDWVRGRVFSIYQMVFFGGMPLGSLLW 363 (524)
T ss_pred HHHHHHHHHHHHhcchHH-----H-HHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHhHHHHHHHHHHHHHHHHHHHHH
Confidence 887777777666665432 1 3334445556777777788888999999999999999999999999999999999
Q ss_pred HHHHHHhhhhccccCCCCchHHHHHHHHHHHHHHHHHhhhhhhc
Q 011783 431 GALFSWAQKRLDASFLPGSQMVFFVLNVVEAIGVLMTFKPFLAQ 474 (477)
Q Consensus 431 g~l~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 474 (477)
|.+.+.. |.+..+.+.++..+++.++.....+++
T Consensus 364 G~la~~~----------g~~~al~~a~~~lll~~~~~~~~~l~~ 397 (524)
T PF05977_consen 364 GFLADHF----------GVRTALLIAGAALLLSALIALRFPLRQ 397 (524)
T ss_pred HHHHHHh----------CHHHHHHHHHHHHHHHHHHHHHhcCcc
Confidence 9999998 777888888877777776665544444
No 60
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism]
Probab=100.00 E-value=1.7e-32 Score=246.68 Aligned_cols=377 Identities=17% Similarity=0.099 Sum_probs=263.2
Q ss_pred CCCCchhHHHHHHHHHHHhhhchhchHhHHHHHHHHhcccccchhhhhhhHHHHHHHHHHHHHHhhhhhhhhhhcCCchh
Q 011783 35 KSGLPITELFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPV 114 (477)
Q Consensus 35 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~Grr~~ 114 (477)
..+.+++.+.++++.++++.++.+.+....+.+++.||.+++. .|++.+.+.+.+.+++|++|+++|||+||++
T Consensus 27 ~~~~~~~~l~il~~vnlmny~Dr~~iagv~~~v~~~fni~~s~------~Gll~~vf~v~~~i~sPl~gyLadryNR~~v 100 (493)
T KOG1330|consen 27 SMKSPTLTLVILCLVNLMNYADRYTIAGVLKEVQTYFNISDSE------LGLLQTVFIVVFMIASPLFGYLADRYNRKRV 100 (493)
T ss_pred ccccchHHHHHHHHHHHHHHhhhhhhhhhhHHHHHhcCCCchh------ccchhHHHHHHHHHHHHHHHHHHhhcCcceE
Confidence 3456677788999999999999999999999999999999999 9999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHhhhhHHHHHHHHHHhhhcccchhhH-HHHhhhhccccchhhHHHHHHHHhHHHHHHHHhHHHHh
Q 011783 115 IIMGTASVVIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFL 193 (477)
Q Consensus 115 ~~~~~~~~~i~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l 193 (477)
+.+|..++.++.++++++..||+++++|.+.|+|.+.+.|+ +++++|.+|.++|++++++++.+..+|..+|.+.+..+
T Consensus 101 ~~vG~~iW~~Av~~~~fs~~Fwq~~l~R~~vGiGeAs~~~ia~s~IaD~f~~~~Rs~~~~ify~~ipvGsglG~vvgs~v 180 (493)
T KOG1330|consen 101 IAVGIFIWTLAVFASGFSNHFWQVLLCRGFVGIGEASYSPIAPSLIADSFPDDKRSRVLGIFYFAIPVGSGLGYVVGSVV 180 (493)
T ss_pred EeeHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhhhcccchhHhhhcCcchhhhHHHHHhhhhcccccceeEEeeeee
Confidence 99999999999999999999999999999999999999998 99999999999999999999999999999999999999
Q ss_pred hhccccCCcccccccccccccchHHHHHHHHHhhccccccCCCCCCccchhhhhhhhhhccchhhcccCCchhhhhhcch
Q 011783 194 AQPAEKYPNLFSSESLFGKFPYFLPCLCISLFAFGETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKSLLKNW 273 (477)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 273 (477)
......|||.|...++. .+++.++..++.+|..+..+++.+...+. ........++.+.+.|++
T Consensus 181 a~~~~~Wr~af~~~avl-----~vi~~~L~~~f~~eP~rga~~~~~~~~~~-----------~~~~ts~~kDl~~l~~~~ 244 (493)
T KOG1330|consen 181 ASLTFWWRWAFRGSAVL-----GVIVGLLVFLFVREPERGARDEVDGENKM-----------VKPFTSVWKDLKVLAKIK 244 (493)
T ss_pred ccCccceEEEEEeehHH-----HHHHHHHHHhhccCcccccccccccCCcC-----------CCCccchHHHHHHHHccC
Confidence 88654455554433322 34444455555555543221111110000 000222334556666777
Q ss_pred hhHHHHHHHHHHHhhhhhhHHHHHHhhcCcccCCccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHhhc----chhHHH
Q 011783 274 PLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILG----PIMVAR 349 (477)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~----~~~~~~ 349 (477)
.+....+.+....+....+.-+.|.+.+..+.. .|.+..+.-++..+...++.+|.+ +++.++||+. +.....
T Consensus 245 v~v~~sl~~~a~~fv~Gs~sww~p~~~~~~~~~--~~~~~~~~~ifg~vt~~~G~lGvl-~Ggiisd~~~~~~~~~~~~~ 321 (493)
T KOG1330|consen 245 VFVLSSLGIIAAQFVIGSLSWWAPAFIYYSYEL--IGFDHNATLIFGGVTCAGGSLGVL-FGGIISDKLSRIFPNSGTLR 321 (493)
T ss_pred ceeeehHHHHHHHHhccccchhhhhHHHHHHHH--hCCccccchhhhhHHHhhchhhhe-ehHHHHHHHHHhcccccchh
Confidence 777777777777666666666666665543332 345555556666666677777766 7888888743 212222
Q ss_pred HHHHHHHHH-------HHHHHHHHHhhhhhHHHHHHHHHHHHhhhhHHHHhHHHHHHhhcCCcchhhHHhHHHHHHH-HH
Q 011783 350 IAGVLTIPL-------LTSYPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIAMTGM-SL 421 (477)
Q Consensus 350 ~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~-~~ 421 (477)
...+.+..+ +.+.+.... ......+.++.... ...........-+..+.+|++.|.++.++...+. .+
T Consensus 322 ~~q~~~~~g~~~s~~~L~~~~~~~~-~s~~~~~il~~~g~---~~~~~~~a~n~~i~l~vV~p~~Rt~a~a~~~~~~h~f 397 (493)
T KOG1330|consen 322 ASQLSAALGAPLSIPFLFLFPAFTS-SSMIFGLILFLVGE---TISWFNWATNNPIFLEVVPPSRRTTAYALDTVFEHIF 397 (493)
T ss_pred HHHHHHhhhhhHHHHHHHHHHhhhh-HHHHHHHHHHHHHH---HHHhcccccccceeeEecCcccccHHHHHHHHHHHHh
Confidence 222222211 111111111 11111111111111 1112222333446678899999999999998876 45
Q ss_pred HHHHhhhHHHHHHHHhhhh
Q 011783 422 FKAAGPAGGGALFSWAQKR 440 (477)
Q Consensus 422 g~~~~~~~~g~l~~~~~~~ 440 (477)
|.+-+|++.|.+.|+...+
T Consensus 398 gd~~~p~ivGilsd~l~g~ 416 (493)
T KOG1330|consen 398 GDAASPYIVGILSDKLRGY 416 (493)
T ss_pred ccCCCcceehhHHHHhhCC
Confidence 5566677999999987444
No 61
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=100.00 E-value=8.9e-31 Score=246.55 Aligned_cols=346 Identities=25% Similarity=0.350 Sum_probs=284.5
Q ss_pred HHHHHHHHhhhchhchHhHHHHHHHHhcccccchhhhhhhHHHHHHHHHHHHHHhhhhhhhhhhcCCchhhHHHHHHHHH
Q 011783 45 SIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVI 124 (477)
Q Consensus 45 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~Grr~~~~~~~~~~~i 124 (477)
.+....+...++.....+..|.+.+++|.+..+ .+++.+.+.++..+++++.|+++||+|||+.+..+.++..+
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~g~~~d~~g~r~~~~~~~~~~~~ 76 (352)
T cd06174 3 LLFLGFFLSGLDRGLLSPALPLLAEDLGLSASQ------AGLIVSAFSLGYALGSLLAGYLSDRFGRRRVLLLGLLLFAL 76 (352)
T ss_pred HHHHHHHHHHHhhhhhHhhHHHHHHHcCCCHHH------HHHHHHHHHHHHHHHHHhHHHHHHHhCCchhhHHHHHHHHH
Confidence 455677788888899999999999999999999 99999999999999999999999999999999999999999
Q ss_pred HHHHHHhhhhHHHHHHHHHHhhhcccchhhH-HHHhhhhccccchhhHHHHHHHHhHHHHHHHHhHHHHhhhccccCCcc
Q 011783 125 FNTLFGLSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNL 203 (477)
Q Consensus 125 ~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~ 203 (477)
+.+...+.++++.+++.|++.|++.+...+. .+++.|++|+|+|++.+++.+....+|..++|.+++.+.+ .
T Consensus 77 ~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~-------~ 149 (352)
T cd06174 77 GSLLLAFASSLWLLLVGRFLLGLGGGALYPAAAALIAEWFPPKERGRALGLFSAGFGLGALLGPLLGGLLAE-------S 149 (352)
T ss_pred HHHHHHHhccHHHHHHHHHHHHcccccccHhHHHHHHHhCCccchhhhhhHHHHHHHHHHHHHHHHHHHHHH-------H
Confidence 9999999999999999999999999998887 9999999999999999999999999999999999999987 3
Q ss_pred cccccccccccchHHHHHHHHHhhccccccCCCCCCccchhhhhhhhhhccchhhcccCCchhhhhhcchhhHHHHHHHH
Q 011783 204 FSSESLFGKFPYFLPCLCISLFAFGETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKSLLKNWPLMSSIIVYC 283 (477)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (477)
.+|+..+................++ |.++...+..+
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~--------------------------------------------~~~~~~~~~~~ 185 (352)
T cd06174 150 LGWRWLFLILAILGLLLALLLLFLL--------------------------------------------RLLLLLALAFF 185 (352)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHH--------------------------------------------HHHHHHHHHHH
Confidence 3444444111111111111111121 44555666666
Q ss_pred HHHhhhhhhHHHHHHhhcCcccCCccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcchh-HHHHHHHHHHHHHHHH
Q 011783 284 VFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIM-VARIAGVLTIPLLTSY 362 (477)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~~ 362 (477)
+.......+..+.+.+..+. .|.+..+.+.......++..++.. +.+++.||+++|+ .+..+..+..++....
T Consensus 186 ~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~i~~~-~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 259 (352)
T cd06174 186 LLSFGYYGLLTYLPLYLQEV-----LGLSAAEAGLLLSLFGLGGILGAL-LGGLLSDRLGRRRLLLLIGLLLAALGLLLL 259 (352)
T ss_pred HHHhHHHHHHHHHHHHHHHh-----cCCCHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHhhhHHHHHHHHHHHHHHHHH
Confidence 66666677777777776643 588999999999999999999988 8899999999999 8888888877777766
Q ss_pred HHHHHhhhhhHHHHHHHHHHHHhhhhHHHHhHHHHHHhhcCCcchhhHHhHHHHHHHHHHHHHhhhHHHHHHHHhhhhcc
Q 011783 363 PYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIAMTGMSLFKAAGPAGGGALFSWAQKRLD 442 (477)
Q Consensus 363 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~ 442 (477)
....+ .........+.+++.+...+....+..|..|+++|++.+|+.+....++..++|.+.|.+.+..
T Consensus 260 ~~~~~------~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~g~l~~~~----- 328 (352)
T cd06174 260 ALAPS------LALLLVALLLLGFGLGFAFPALLTLASELAPPEARGTASGLFNTFGSLGGALGPLLAGLLLDTG----- 328 (352)
T ss_pred HHhcc------HHHHHHHHHHHHHHHhccchhHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc-----
Confidence 55432 2234444555567778888999999999999999999999999999999999999999999866
Q ss_pred ccCCCCchHHHHHHHHHHHHHHHHHhh
Q 011783 443 ASFLPGSQMVFFVLNVVEAIGVLMTFK 469 (477)
Q Consensus 443 ~~~~~g~~~~~~~~~~~~~~~~~~~~~ 469 (477)
+++..+.+.+++.+++.+....
T Consensus 329 -----~~~~~~~~~~~~~~i~~i~~~~ 350 (352)
T cd06174 329 -----GYGGVFLILAALALLAALLLLL 350 (352)
T ss_pred -----CcchHHHHHHHHHHHHHHHhee
Confidence 8889999999988888776543
No 62
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=100.00 E-value=1.2e-30 Score=249.08 Aligned_cols=353 Identities=12% Similarity=0.099 Sum_probs=251.5
Q ss_pred CchhHHHHHHHHHHHhhhchhchHhHHHHHHHHhcccccchhhhhhhHHHHHHHHHHHHHHhhhhhhhhhhcCCchhhHH
Q 011783 38 LPITELFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIM 117 (477)
Q Consensus 38 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~Grr~~~~~ 117 (477)
+++|.+.+.....++..+......|.+|.+.+++|.++.+ .+++.+++.+++.++++++|+++||+|||+++..
T Consensus 5 ~~~~~l~~~~~~~~~~~~~~~~~~p~~~~i~~~~~~s~~~------~~~~~~~~~~~~~~~~~~~G~l~Dr~grr~~~~~ 78 (394)
T PRK11652 5 RNVNLLFMLVLLVAVGQMAQTIYVPAIADMARDLNVREGA------VQAVMAAYLLTYGLSQLFYGPLSDRVGRRPVILV 78 (394)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHhCCCHHH------HHHHHHHHHHHHHHHHHhhhhHHHhcCChHHHHH
Confidence 4566677777777777888888899999999999999999 9999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhhhhHHHHHHHHHHhhhcccchhhH-HHHhhhhccccchhhHHHHHHHHhHHHHHHHHhHHHHhhhc
Q 011783 118 GTASVVIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQP 196 (477)
Q Consensus 118 ~~~~~~i~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~ 196 (477)
+.++..++.+++.++++++.+++.|++.|++.+...+. ..+..|.+++++|+++.+..+.+..++..++|.+++.+.+
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~- 157 (394)
T PRK11652 79 GMSIFILGTLVALFAHSLTVLIAASAIQGLGTGVGGVMARTLPRDLYEGTQLRHANSLLNMGILVSPLLAPLIGGLLTT- 157 (394)
T ss_pred HHHHHHHHHHHHHHHccHHHHHHHHHHHHhhhhHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-
Confidence 99999999999999999999999999999998887777 8889999999999999999999999999999999999887
Q ss_pred cccCCcccccccccccccc-hHHHHHHHHHhhccccccCCCCCCccchhhhhhhhhhccchhhcccCCchhhhhhcchhh
Q 011783 197 AEKYPNLFSSESLFGKFPY-FLPCLCISLFAFGETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKSLLKNWPL 275 (477)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 275 (477)
..+|+..+..... .....+......||+++.+++ + ++.....++.+|+|.+
T Consensus 158 ------~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~---~-------------------~~~~~~~~~~~~~~~~ 209 (394)
T PRK11652 158 ------LFGWRACYLFLLLLGAGVTFSMARWMPETRPADAR---R-------------------TRVLASYRTLLSNRRF 209 (394)
T ss_pred ------ccChHHHHHHHHHHHHHHHHHHHHhCCccCccccc---h-------------------hHHHHHHHHHHcChHH
Confidence 3445544411111 111112222334443221100 0 0012345667788887
Q ss_pred HHHHHHHHHHHhhhhhhHHHHHHhhcCcccCCccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHH
Q 011783 276 MSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLT 355 (477)
Q Consensus 276 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 355 (477)
+...+..+........+....+.+..+. +|+++.+.++......++.++++. +.+++.||.+++... .....
T Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~g~~~~~~~~~~~~~~~~~~~g~~-~~~~l~~~~~~~~~~--~~~~~ 281 (394)
T PRK11652 210 NCYLLMLIGTLAGIAVFEACSGVLMGAV-----LGLSSMTVSILFILPIPAAFFGAW-FAGRPNKRFSTLMWQ--SVICC 281 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHhChHHHHHH-----cCCCHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHH--HHHHH
Confidence 7655554444433334444444444433 788899999988888888888877 788888888732222 22222
Q ss_pred HHHHHHHHHHHHhhhhhHHHHHHHHHHHHhhhhHHHHhHHHHHHhhcCCcchhhHHhHHHHHHHHHHHHHhhhHHHHHHH
Q 011783 356 IPLLTSYPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIAMTGMSLFKAAGPAGGGALFS 435 (477)
Q Consensus 356 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~ 435 (477)
.+....+...........+ .......+.+++.+...|...++..+..| +++|++.++.+....+|..+++.++|.+.+
T Consensus 282 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~g~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~lg~~~~~~~~~~~~~ 359 (394)
T PRK11652 282 LLAGLLMWIPGWFGVMNVW-TLLVPAALFFFGAGMLFPLATSGAMEPFP-YLAGTAGALLGGLQNIGSGLAALLSAMLPQ 359 (394)
T ss_pred HHHHHHHHHHHHhccccHH-HHHHHHHHHHHHHHHHHHHHHHHHHhhcc-ccchHHHHHHHHHHHHHHHHHHHHHHHccC
Confidence 2222221111110011112 22333344456667778888888888777 678999999999999999999998887754
No 63
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=100.00 E-value=4e-30 Score=245.43 Aligned_cols=344 Identities=19% Similarity=0.177 Sum_probs=240.6
Q ss_pred HHHHHHHHHHhhhchhchHhHHHHHHHHhcccccchhhhhhhHHHHHHHHHHHHHHhhhhhhhhhhcCCchhhHHHHHHH
Q 011783 43 LFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASV 122 (477)
Q Consensus 43 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~Grr~~~~~~~~~~ 122 (477)
+.......+....+.....+.+|.+.+++|.+..+ .++..+.+.++..+++++.|+++||+|||+++..+.++.
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~s~~~------~~~~~~~~~~~~~~~~~~~G~l~Dr~g~r~~l~~~~~~~ 78 (392)
T PRK10473 5 LLCSFALVLLYPAGIDMYLVGLPRIAADLNASEAQ------LHIAFSVYLAGMAAAMLFAGKIADRSGRKPVAIPGAALF 78 (392)
T ss_pred HHHHHHHHHHHHHHHHHHhhhHHHHHHHhCCCHHH------HHHHHHHHHHHHHHHHHhHhHHHHHhCChHHHHHHHHHH
Confidence 44556666777777788889999999999999999 999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhhhHHHHHHHHHHhhhcccchhhH-HHHhhhhccccchhhHHHHHHHHhHHHHHHHHhHHHHhhhccccCC
Q 011783 123 VIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYP 201 (477)
Q Consensus 123 ~i~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~ 201 (477)
.++.+++..+++++.+++.|+++|++.+...+. .+++.|++|+++|++++++.+....+|..++|.+++.+.+
T Consensus 79 ~i~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~i~~~~~~~i~~~l~~------ 152 (392)
T PRK10473 79 IIASLLCSLAETSSLFLAGRFLQGIGAGCCYVVAFAILRDTLDDRRRAKVLSLLNGITCIIPVLAPVLGHLIML------ 152 (392)
T ss_pred HHHHHHHHHhCcHHHHHHHHHHHHhhhhHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh------
Confidence 999999999999999999999999998887776 9999999999999999999999999999999999988876
Q ss_pred ccccccccccccc-chHHHHHHHHHhhccccccCCCCCCccchhhhhhhhhhccchhhcccCCchhhhhhcchhhHHHHH
Q 011783 202 NLFSSESLFGKFP-YFLPCLCISLFAFGETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKSLLKNWPLMSSII 280 (477)
Q Consensus 202 ~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (477)
.++|+..+.... ......+.....++|+++.++ ++ + .+..+..++.++++.++...+
T Consensus 153 -~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~---~~-~-----------------~~~~~~~~~~~~~~~~~~~~~ 210 (392)
T PRK10473 153 -KFPWQSLFYTMAAMGILVLLLSLFILKETRPARA---PA-A-----------------SSKPRENSESLLNRFFLSRLV 210 (392)
T ss_pred -CcChHHHHHHHHHHHHHHHHHHHHHcCCCCCccc---CC-c-----------------cchHHHHHHHHhCHHHHHHHH
Confidence 334544431111 111222223344455432210 00 0 001123345677777665554
Q ss_pred HHHHHHhhhhhhHHHHHHhhcCcccCCccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHH
Q 011783 281 VYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTIPLLT 360 (477)
Q Consensus 281 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 360 (477)
...+.......+..+.|.+..+ ++|+++.+.+......+++.+++.. +.+++.||+++|+.+..+..+..++..
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~-----~~g~~~~~~~~~~~~~~~~~i~~~~-~~~~l~~r~g~~~~~~~~~~~~~~~~~ 284 (392)
T PRK10473 211 ITTLSVTVILTFVNTSPVLLME-----QMGFSRGEYAIIMALTAGVSMTVSF-STPFALGIFKPRTLMLTSQVLFLAAGI 284 (392)
T ss_pred HHHHHHHHHHHHHHhCHHHHHH-----HcCCCHHHHHHHHHHHHHHHHHHHH-HHHHHHHhcCHHHHHHHHHHHHHHHHH
Confidence 4443333333344444544433 2788999999999999999999988 889999999999998888877776666
Q ss_pred HHHHHHHhhhhhHHHHHHHHHHHHhhhhHHHHhHHHHHHhhcCCcchhhHHhHHHHHHHHHHHHHhhhHHHHHHHHh
Q 011783 361 SYPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIAMTGMSLFKAAGPAGGGALFSWA 437 (477)
Q Consensus 361 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~ 437 (477)
.+....... ......... ..+.+...+. ....+..|.++|+ |.......++..+++.+.+++.++.
T Consensus 285 ~~~~~~~~~----~~~~~~~l~--~~g~~~~~~~--~~~~~~~~~~~~~---g~~~~~~~~~~~~g~~~~~~l~~~~ 350 (392)
T PRK10473 285 TLALSPSHA----VSLFGITLI--CAGFSVGFGV--AMSQALGPFSLRA---GVASSTLGIAQVCGSSLWIWLAAVL 350 (392)
T ss_pred HHHHHHHHH----HHHHHHHHH--HHHHHHHhHH--HHHHHhccCcccc---cHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 555443211 111111111 1111122222 2223344544443 4445556778888888888888877
No 64
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=100.00 E-value=1.6e-30 Score=247.14 Aligned_cols=335 Identities=19% Similarity=0.219 Sum_probs=234.2
Q ss_pred hchhchHhHHHHHHHHhcccccchhhhhhhHHHHHHHHHHHHHHhhhhhhhhhhcCCchhhHHHHHHHHHHHHHHHhhhh
Q 011783 55 LPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLSVN 134 (477)
Q Consensus 55 ~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~Grr~~~~~~~~~~~i~~~~~~~~~~ 134 (477)
++..++.|.+|.+.+++|.++.+ .+++.+++.++..++++++|+++||+|||+++..+.++.+++.+.+.++++
T Consensus 5 ~~~~~~~p~~~~~~~~~~~s~~~------~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~i~~~~~~~~~~ 78 (377)
T PRK11102 5 LAIDMYLPALPVIAADFGVSAGS------VQMTLSAYILGFAIGQLFYGPMADSFGRKPVILGGTLVFALAAVACALAQT 78 (377)
T ss_pred hHHHHHhccHHHHHHHhCCCHHH------HHHHHHHHHHHHHHHHHhhchHHhhcCChHHHHHHHHHHHHHHHHHHHHcc
Confidence 45567789999999999999999 999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhhcccchhhH-HHHhhhhccccchhhHHHHHHHHhHHHHHHHHhHHHHhhhccccCCcccccccccccc
Q 011783 135 FWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSESLFGKF 213 (477)
Q Consensus 135 ~~~l~~~r~l~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~~ 213 (477)
++.+++.|++.|++.+...+. .+++.|++|+++|++++++.+....+|..++|.+++.+.+ .++|+..+...
T Consensus 79 ~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~-------~~~~~~~~~~~ 151 (377)
T PRK11102 79 IDQLIYMRFLHGLAAAAASVVINALMRDMFPKEEFSRMMSFVTLVMTIAPLLAPIIGGWLLV-------WFSWHAIFWVL 151 (377)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------HcChHHHHHHH
Confidence 999999999999998888777 9999999999999999999999999999999999999987 34455444111
Q ss_pred cc-hHHHHHHHHHhhccccccCCCCCCccchhhhhhhhhhccchhhcccCCchhhhhhcchhhHHHHHHHHHHHhhhhhh
Q 011783 214 PY-FLPCLCISLFAFGETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKSLLKNWPLMSSIIVYCVFSLHDMAY 292 (477)
Q Consensus 214 ~~-~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (477)
.. .....+.....+||+++.++++ +.+ .++.....++.++++.++...+...+.......+
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~--~~~----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 213 (377)
T PRK11102 152 ALAAILAAALVFFFIPETLPKERRQ--PFH----------------LRTTIRNFASLFRHKRVLGYMLASGFSFAGMFSF 213 (377)
T ss_pred HHHHHHHHHHHHHhCCccCcccccC--CCC----------------hHHHHHHHHHHHcChHHHHHHHHHHHHHHHHHHH
Confidence 11 1111222233444443211100 000 0001124556788888776666555544444444
Q ss_pred HHHHHHhhcCcccCCccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHHHhhhhh
Q 011783 293 SEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTIPLLTSYPYIAMLSGFG 372 (477)
Q Consensus 293 ~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 372 (477)
..+.|.+..+. +|+++.+.+.......++.++++. +.+++.||+++|+.+..+..+..+....+......+ ..
T Consensus 214 ~~~~~~~~~~~-----~g~s~~~~g~~~~~~~~~~~~~~~-~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 286 (377)
T PRK11102 214 LTAGPFVYIEL-----NGVSPQNFGYYFALNIVFLFVMTI-INSRFVRRVGALNMLRFGLWIQFIMGIWLVVSALLD-LG 286 (377)
T ss_pred HHcCHHHHHHH-----hCCCHHHHHHHHHHHHHHHHHHHH-HHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHHh-hh
Confidence 44444444332 788999999999999999999988 889999999999998887765444333222221111 11
Q ss_pred HHHHHHHHHHHHhhhhHHHHhHHHHHHhhcCCcchhhHHhHHHHHHH-HHHHHHhhhH
Q 011783 373 LAFLLNCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIAMTGM-SLFKAAGPAG 429 (477)
Q Consensus 373 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~-~~g~~~~~~~ 429 (477)
.+...... ...........+.......+..| +.++++.++.+... .+|..+++.+
T Consensus 287 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~g~~~g~~~ 342 (377)
T PRK11102 287 FWALVVGV-AAFVGCVSMISSNAMAVILDEFP-HMAGTASSLAGTLRFGIGAIVGALL 342 (377)
T ss_pred HHHHHHHH-HHHHHHHHHhhHHHHHHHhcccc-ccchHHHHHHHHHHHHHHHHHHHHH
Confidence 11111111 11122233334444555666665 78999999987765 3555555554
No 65
>PRK15011 sugar efflux transporter B; Provisional
Probab=100.00 E-value=1e-29 Score=242.07 Aligned_cols=367 Identities=14% Similarity=0.145 Sum_probs=241.5
Q ss_pred HHHHHHHHHHHhhhchhchHhHHHH-HHHHhcccccchhhhhhhHHHHHHHHH-HHHHHhhhhhhhhhhcCCchhh-HHH
Q 011783 42 ELFSIWIIVLCTALPISSLFPFLYF-MIKDFQIAKREEDIGSYAGYVGSSFMF-GRALTSVFWGLVADRYGRKPVI-IMG 118 (477)
Q Consensus 42 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~s~~~~~~~~~~g~~~s~~~~-~~~~~~~~~G~l~Dr~Grr~~~-~~~ 118 (477)
.....++..++..+......|.+|. +.+|+|.+.++ +|++.+...+ ++.+++++.|+ +||+||||.+ ..+
T Consensus 16 ~~~~~~~~~~~~~~~~~~~~p~~~~~l~~~~~~s~~~------~g~~~~~~~~~~~~~~~~~~~~-~dr~g~r~~~~~~~ 88 (393)
T PRK15011 16 TSTAFLIVAFLTGIAGALQTPTLSIFLTDEVHARPAM------VGFFFTGSAVIGILVSQFLAGR-SDKRGDRKSLIVFC 88 (393)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCHHH------HHHHHHHHHHHHHHHHHHHHHH-HhcccchhHHHHHH
Confidence 3455667788888898888999985 67889999999 9999876655 55566655555 9999999875 556
Q ss_pred HHHHHHHHHHHHhhhhHHHHHHHHHHhhhcccchhhH-HHHhhhhccccch--hhHHHHHHHHhHHHHHHHHhHHHHhhh
Q 011783 119 TASVVIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQ--ALGLSTVSTAWGIGLIIGPALGGFLAQ 195 (477)
Q Consensus 119 ~~~~~i~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~-~~~i~~~~~~~~r--~~~~~~~~~~~~~g~~~g~~~~~~l~~ 195 (477)
.+..+++..+.+++++++++++.+.+.|...+...|. .+++.|+.++++| +...++.+.+.++|.++||++++.+.+
T Consensus 89 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~g~~i~~~l~~ 168 (393)
T PRK15011 89 CLLGVLACTLFAWNRNYFVLLFVGVFLSSFGSTANPQMFALAREHADKTGREAVMFSSFLRAQVSLAWVIGPPLAYALAM 168 (393)
T ss_pred HHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHHHHhhHHHHHHHH
Confidence 6666777888889999998877766555555566776 8888888876655 344578889999999999999999988
Q ss_pred ccccCCcccccccccccccc-hHHHHHHHHHhhccccccCCCCCCccchhhhhhhhhhccchhhcccCCchhhhhhcchh
Q 011783 196 PAEKYPNLFSSESLFGKFPY-FLPCLCISLFAFGETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKSLLKNWP 274 (477)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 274 (477)
.++||..|..... .+...+.....+||.++.++.+++ + .+ ..++ +.+.
T Consensus 169 -------~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~----------------~~----~~~~--~~~~ 217 (393)
T PRK15011 169 -------GFSFTVMYLSAAVAFIVCGVMVWLFLPSMRKELPLATG--T----------------LE----APRR--NRRD 217 (393)
T ss_pred -------hcChHHHHHHHHHHHHHHHHHHHhhcCccCCCCccccc--c----------------cc----cccc--cccc
Confidence 4567666521111 111222223345554322111000 0 00 0000 1122
Q ss_pred hHHHHHHHHHHHhhhhhhHHHHHHhhcCcccCCccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHH
Q 011783 275 LMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVL 354 (477)
Q Consensus 275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 354 (477)
.+...............+..+.|.|.++. +|+++.+.+.+.....+..+++.. +.+++.||+++|+....+...
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~p~~l~~~-----~~~~~~~~g~~~~~~~~~~i~~~~-~~G~l~dr~g~~~~~~~~~~~ 291 (393)
T PRK15011 218 TLLLFVICTLMWGTNSLYIINMPLFIINE-----LHLPEKLAGVMMGTAAGLEIPTML-IAGYFAKRLGKRFLMRVAAVA 291 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----cCCCHHHHHHHHHHHHHHHHHHHH-HHHHHHHHhChHHHHHHHHHH
Confidence 22222333333333444555677666543 788998999888877777777777 899999999999887766555
Q ss_pred HHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhhhhHHHHhHHHHHHhhcCCcchhhHHhHHHHHHHHHHHHHhhhHHHHHH
Q 011783 355 TIPLLTSYPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIAMTGMSLFKAAGPAGGGALF 434 (477)
Q Consensus 355 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~ 434 (477)
..+.+....... +. +.. .....+.++..+...+....+.+|..| +++|+++++.+...++|..++|.+.|.+.
T Consensus 292 ~~~~~~~~~~~~---~~--~~~-l~~~~l~~~~~g~~~~~~~~~~~~~~p-~~~g~~~~~~~~~~~lg~~~g~~l~G~i~ 364 (393)
T PRK15011 292 GVCFYAGMLMAH---SP--AIL-LGLQLLNAIYIGILGGIGMLYFQDLMP-GQAGSATTLYTNTSRVGWIIAGSLAGIVA 364 (393)
T ss_pred HHHHHHHHHHHh---hH--HHH-HHHHHHHHHHHHHHHHHHHHHHHHhCC-CCcchHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 444433222211 11 111 111222222333334444566778777 46999999999999999999999999999
Q ss_pred HHhhhhccccCCCCchHHHHHHHHHHHHHHHHHhh
Q 011783 435 SWAQKRLDASFLPGSQMVFFVLNVVEAIGVLMTFK 469 (477)
Q Consensus 435 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 469 (477)
++. ||+..|.+.+++.+++.+..++
T Consensus 365 ~~~----------g~~~~~~~~~~~~~~~~~~~~~ 389 (393)
T PRK15011 365 EIW----------NYHAVFWFALVMIIATLFCLLR 389 (393)
T ss_pred HHh----------hhHHHHHHHHHHHHHHHHHHHh
Confidence 987 8888998888888877776655
No 66
>PRK11010 ampG muropeptide transporter; Validated
Probab=100.00 E-value=8.5e-30 Score=248.05 Aligned_cols=380 Identities=13% Similarity=0.135 Sum_probs=267.1
Q ss_pred hhHHHHHHHHHHHhhhchhchHhHHHHHHHHhcccccchhhhhhhHHHHHHHHHHHHHHhhhhhhhhhhc-----CCchh
Q 011783 40 ITELFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRY-----GRKPV 114 (477)
Q Consensus 40 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~-----Grr~~ 114 (477)
+|+...++...+...+......+.+|.+.++.|.+.++ +|.+ +.....+ ++++++|+++||+ ||||.
T Consensus 11 ~~~~~~~~~l~~~~gl~~~~~~~~l~~~l~~~g~~~~~------ig~~-~~~~~~~-~~~~l~gpl~Dr~~~~~~Grrr~ 82 (491)
T PRK11010 11 QPNSAILLILGFASGLPLALTSGTLQAWMTVENIDLKT------IGFF-SLVGQAY-VFKFLWSPLMDRYTPPFLGRRRG 82 (491)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCHHH------HHHH-HHHHHHH-HHHHHHHHHHHcccccCCCCchH
Confidence 34566777788888888889999999999999999988 8886 4444444 6899999999999 99986
Q ss_pred -hHHHHHHHHHHHHHHHhh---hhHHHHHHHHHHhhhcccchhhH-HHHhhhhccccchhhHHHHHHHHhHHHHHHHHhH
Q 011783 115 -IIMGTASVVIFNTLFGLS---VNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPAL 189 (477)
Q Consensus 115 -~~~~~~~~~i~~~~~~~~---~~~~~l~~~r~l~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~ 189 (477)
+..+.+..+++...+++. ++++.+.+.+++.|++.+...+. .+++.|++|+|||+++.++...+..+|.++++.+
T Consensus 83 ~ll~~~i~~~~~~~~~a~~~~~~~l~~l~~~~~l~~~~~a~~~i~~~a~~~~~~~~~~rg~~~~i~~~g~~lG~llg~~l 162 (491)
T PRK11010 83 WLLATQLLLLVAIAAMGFLEPGTQLRWLAALAVVIAFCSASQDIVFDAWKTDVLPAEERGAGAAISVLGYRLAMLVSGGL 162 (491)
T ss_pred HHHHHHHHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhhhHHHHHHHHHHHHHHHHHHHHH
Confidence 667778887887777665 47889999999999998887777 9999999999999999999999999999999999
Q ss_pred HHHhhhccccCCcccccccccccccchHHHHHHHHHhhccccccCCCCCCccchhhhhhhhhhccchhhcccCCchhhhh
Q 011783 190 GGFLAQPAEKYPNLFSSESLFGKFPYFLPCLCISLFAFGETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKSL 269 (477)
Q Consensus 190 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (477)
++++.+.. ++||..|...........+..+..||+++.. + ++.+ . +++...+.++.
T Consensus 163 ~~~l~~~~------~GWr~~f~i~a~l~ll~~l~~~~~~e~~~~~--~-~~~~-~--------------~~~~~~~l~~~ 218 (491)
T PRK11010 163 ALWLADRY------LGWQGMYWLMAALLIPCIIATLLAPEPTDTI--P-VPKT-L--------------EQAVVAPLRDF 218 (491)
T ss_pred HHHHHhcc------cCHHHHHHHHHHHHHHHHHHHHhcCCCcccc--c-cccc-h--------------hhhHHHHHHHH
Confidence 99988732 3555555211111122222222345533211 0 0000 0 00011245667
Q ss_pred hcchhhHHHHHHHHHHHhhhhhhHHHHHHhhcCcccCCccccchhhhHHHHH-HHHHHHHHHHHHHHHHHHHhhcchhHH
Q 011783 270 LKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLA-ITGFSLLVFQLSLYPFLERILGPIMVA 348 (477)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~ 348 (477)
++++..+......+++.........+.+.|+.+ ..|+++.+.+.... ...++.+++.+ +++++.||+++|+.+
T Consensus 219 ~~~~~~~~~ll~~~l~~~~~~~~~~~~~~~l~~-----~~G~s~~~~g~~~~~~g~i~~iiG~l-l~G~L~dr~g~~~~l 292 (491)
T PRK11010 219 FGRNNAWLILLLIVLYKLGDAFAMSLTTTFLIR-----GVGFDAGEVGLVNKTLGLLATIVGAL-YGGILMQRLSLFRAL 292 (491)
T ss_pred HcCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----hcCCCHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHhHHHHH
Confidence 777777766655555554444445555555543 27999999999875 44567778877 999999999988877
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhhhhHHHHhHHHHHHhhcCCcchhhHHhHHHHHHHHHHHHHhhh
Q 011783 349 RIAGVLTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIAMTGMSLFKAAGPA 428 (477)
Q Consensus 349 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~ 428 (477)
..+..+..+..+.+........ ..+ .+....++..+..+...+...++..+..+++.+++..|+.+....+|..+++.
T Consensus 293 ~i~~~l~~l~~l~~~~l~~~~~-~~~-~l~~~~~l~~~~~g~~~~~~~a~~~~l~~~~~~~t~~gl~~s~~~lg~~~~~~ 370 (491)
T PRK11010 293 MIFGILQGVSNAGYWLLSITDK-NLY-SMGAAVFFENLCGGMGTAAFVALLMTLCNKSFSATQFALLSALSAVGRVYVGP 370 (491)
T ss_pred HHHHHHHHHHHHHHHHHHhccc-cHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHHH
Confidence 7665554444333222111111 111 12222222223334445566778888899999999999999999999999999
Q ss_pred HHHHHHHHhhhhccccCCCCchHHHHHHHHHHHHHHHHHhh
Q 011783 429 GGGALFSWAQKRLDASFLPGSQMVFFVLNVVEAIGVLMTFK 469 (477)
Q Consensus 429 ~~g~l~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 469 (477)
+.|.+.|.. ||+..|.+.+++++.+.+....
T Consensus 371 ~~G~l~~~~----------G~~~~f~~~~~~~l~~l~~~~~ 401 (491)
T PRK11010 371 VAGWFVEAH----------GWPTFYLFSVAAAVPGLLLLLV 401 (491)
T ss_pred HHHHHHHHh----------ChHHHHHHHHHHHHHHHHHHHH
Confidence 999999987 8999999999998888777655
No 67
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=100.00 E-value=3.1e-30 Score=246.80 Aligned_cols=367 Identities=14% Similarity=0.062 Sum_probs=246.5
Q ss_pred HHhhhchhchHhHHHHHHHHhcc--cccchhhhhhhHHHHH-----HHHHHHHHHhhhhhhhhhhcCCchhhHHHHHHHH
Q 011783 51 LCTALPISSLFPFLYFMIKDFQI--AKREEDIGSYAGYVGS-----SFMFGRALTSVFWGLVADRYGRKPVIIMGTASVV 123 (477)
Q Consensus 51 ~~~~~~~~~~~~~~~~~~~~~~~--s~~~~~~~~~~g~~~s-----~~~~~~~~~~~~~G~l~Dr~Grr~~~~~~~~~~~ 123 (477)
+.++++...+....+.+.+++.. ++++ .+.+.+ ...++..+++++.|+++||+|||+++..+.++..
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~i~~~~~G~l~dr~g~r~~l~~~~~~~~ 76 (394)
T TIGR00883 3 AVEWFDFYLYGFAAVLVFHTFFPPSGDPL------VALLATFATFAAGFLARPLGAIVFGHFGDRIGRKKTLVITLLMMG 76 (394)
T ss_pred chhHHHHHHHHHHHHHHHHHhcCCCCChH------HHHHHHHHHHHHHHHHhhhHHHHhhhhhhhhhhHHHHHHHHHHHH
Confidence 45678888888888888887654 3333 444333 3444556789999999999999999999999999
Q ss_pred HHHHHHHhhhhHH--------HHHHHHHHhhhcccchhhH-HHHhhhhccccchhhHHHHHHHHhHHHHHHHHhHHHHhh
Q 011783 124 IFNTLFGLSVNFW--------MAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLA 194 (477)
Q Consensus 124 i~~~~~~~~~~~~--------~l~~~r~l~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~ 194 (477)
++.++++++++++ .+++.|+++|++.+...+. .+++.|++|+++|++..+..+.+..+|.++++.++..+.
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~G~~i~~~~~~~~~ 156 (394)
T TIGR00883 77 IGTLLIGLLPSYATIGIWAPILLLLARLIQGFSLGGEWGGAALYLAEYAPPGKRGFYGSFQQVGAPVGLLLAALTVLLLS 156 (394)
T ss_pred HHHHHHhhCCChhhhHHHHHHHHHHHHHHHHhhccccccccHHHhhhcCCcccchHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999998875 4889999999998888777 999999999999999999999999999999999887765
Q ss_pred hccc-cCCcccccccccccccchHHHHHHHHHhhccccccCCCCCCccchhhhhhhhhhccchhhcccCCchhhhhhcch
Q 011783 195 QPAE-KYPNLFSSESLFGKFPYFLPCLCISLFAFGETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKSLLKNW 273 (477)
Q Consensus 195 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 273 (477)
.... ..-..++|+..+.................+|+++.+++++ ++++...+.++.++++
T Consensus 157 ~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------------~~~~~~~~~~~~~~~~ 217 (394)
T TIGR00883 157 YLLGDDALLEWGWRIPFLVSAVLVLIGLYLRRNLEETPVFEKAQE-------------------KHKKKRGPIRETLTKH 217 (394)
T ss_pred HhcCHHHhhccchHHHHHHHHHHHHHHHHHHHhcCCChhHHHHHh-------------------ccccccCCHHHHHHhc
Confidence 3111 0001345655551100011111111112222221110000 0111223455566665
Q ss_pred h--hHHHHHHHHHHHhhhhhhHHHHHHhhcCcccCCccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHH
Q 011783 274 P--LMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIA 351 (477)
Q Consensus 274 ~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 351 (477)
+ ++......++..........+.|.|..+. +|.++.+.+.......+...++.+ +.+++.||+++|+.+...
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~g~~~~~~~~~~~~~~~~~~~~~~-~~g~l~dr~g~~~~~~~~ 291 (394)
T TIGR00883 218 RKPFLLGLGLVIATTTTFYLITTYLPTYLTQT-----LGLSANSALLVLMLSLILFFITIP-LSGALSDRIGRRPVLIIF 291 (394)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-----cCCChhHHHHHHHHHHHHHHHHHH-HHHHHHHHhchHHHHHHH
Confidence 4 55555555555555556666777776543 688888999999998999999988 889999999999877655
Q ss_pred HHHHHHHH-HHHHHHHHhhhhhHHHHHHHHHHHHhhhhHHHHhHHHHHHhhcCCcchhhHHhHHH-HHHHHHHHHHhhhH
Q 011783 352 GVLTIPLL-TSYPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIA-MTGMSLFKAAGPAG 429 (477)
Q Consensus 352 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~-~~~~~~g~~~~~~~ 429 (477)
..+..+.. ........... .+ .......+.+++.+...+...++..|.+|++.|+++.++. +....+|..++|.+
T Consensus 292 ~~~~~~~~~~~~~~~~~~~~--~~-~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~g~~~~p~~ 368 (394)
T TIGR00883 292 TVLAALLAVPLLMALLDSGS--FT-LFFFLVLGLALIGGMYTGPMGSFLPELFPTEVRYTGASLAYNLAGAIFGGFAPYI 368 (394)
T ss_pred HHHHHHHHHHHHHHHhcCCc--hH-HHHHHHHHHHHHHHHHhhhHHHHHHHhCCccceeeEeeehhHhHHHHHhhHHHHH
Confidence 44433322 22211111111 11 2223334445566677788889999999999999999985 44567888999999
Q ss_pred HHHHHHHhhhhccccCCCC-chHHHHHHHHHHH
Q 011783 430 GGALFSWAQKRLDASFLPG-SQMVFFVLNVVEA 461 (477)
Q Consensus 430 ~g~l~~~~~~~~~~~~~~g-~~~~~~~~~~~~~ 461 (477)
.|.+.++. | ++..++...++++
T Consensus 369 ~g~l~~~~----------g~~~~~~~~~~~~~l 391 (394)
T TIGR00883 369 AAALVAMT----------GDWYAIGYYLAALAL 391 (394)
T ss_pred HHHHHHHc----------CcchhHHHHHHHHHH
Confidence 99999987 4 5556555554443
No 68
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=100.00 E-value=7e-30 Score=240.34 Aligned_cols=334 Identities=16% Similarity=0.081 Sum_probs=246.6
Q ss_pred hchhchHhHHHHHHHHhcccccchhhhhhhHHHHHHHHHHHHHHhhhhhhhhhhcCCchhhHHHHHHHHHHHHHHHhhhh
Q 011783 55 LPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLSVN 134 (477)
Q Consensus 55 ~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~Grr~~~~~~~~~~~i~~~~~~~~~~ 134 (477)
.......+.+|.+.+|+|.+.++ .|++.+++.+++.+++++.|+++||+|||+++.++.++..++.+.+ .+++
T Consensus 14 ~~~~~~~~~lp~l~~~~~~s~~~------~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~-~~~~ 86 (355)
T TIGR00896 14 PALTSVGPLLPQIRSALGMSFSV------AGLLTALPVLCFAVLAPLAPWLARRFGEERSVAAGLLLIAAGILIR-SAPG 86 (355)
T ss_pred CccccCcccHHHHHHHhCCCHHH------HHHHHHHHHHHHHHHHHhHHHHHHHhCchHHHHHHHHHHHHHHHHH-Hhcc
Confidence 34466789999999999999999 9999999999999999999999999999999999999988888877 7789
Q ss_pred HHHHHHHHHHhhhcccchhhH-HHHhhhhccccchhhHHHHHHHHhHHHHHHHHhHHHHhhhccccCCcccccccccccc
Q 011783 135 FWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSESLFGKF 213 (477)
Q Consensus 135 ~~~l~~~r~l~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~~ 213 (477)
++.+++.|++.|++.+...+. ..++.|++| ++|++++++.+.+.++|..+++.+++.+.+.... +||..|...
T Consensus 87 ~~~l~~~~~~~g~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~i~~~~~~~l~~~~~~-----~w~~~f~~~ 160 (355)
T TIGR00896 87 TALLFAGTALIGVGIAIINVLLPSLIKRDFP-QRVGLMTGLYSMALMGGAALAAAATVPLAQHSGG-----HWQQALAWW 160 (355)
T ss_pred HHHHHHHHHHHHHHHHHHhccchHHHHHhCc-chhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhh-----hHHHHHHHH
Confidence 999999999999998887766 888889886 6899999999999999999999999988764211 144433100
Q ss_pred cchHHHHHHHHHhhccccccCCCCCCccchhhhhhhhhhccchhhcccCCchhhhhhcchhhHHHHHHHHHHHhhhhhhH
Q 011783 214 PYFLPCLCISLFAFGETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKSLLKNWPLMSSIIVYCVFSLHDMAYS 293 (477)
Q Consensus 214 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (477)
.....+.....+|+.++++++ + +.+.....++.+|+|.++...+..++.........
T Consensus 161 --~~~~~~~~~~~~~~~~~~~~~---~------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 217 (355)
T TIGR00896 161 --ALPALLALLAWIPQVRRRVAA---N------------------QTTTRLTPVRIWRSPLAWQVTVFFGLQSGLYYSLI 217 (355)
T ss_pred --HHHHHHHHHHHhhhhccccCC---C------------------CCCCCCCCchhhcCHhHHHHHHHHHHHHHHHHHHH
Confidence 111111222334443221110 0 00011234567788888876666666555666666
Q ss_pred HHHHHhhcCcccCCccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHhhc-chhHHHHHHHHHHHHHHHHHHHHHhhhhh
Q 011783 294 EIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILG-PIMVARIAGVLTIPLLTSYPYIAMLSGFG 372 (477)
Q Consensus 294 ~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 372 (477)
.+.|.|..+ .|+++.+.+...+...++.+++++ ..+++.||++ +|+.+..+..+..++...+.+.....
T Consensus 218 ~~lp~~~~~------~g~~~~~~g~~~~~~~~~~i~~~~-~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 287 (355)
T TIGR00896 218 GWLPAILIS------HGASAATAGSLLALMQLAQAASAL-LIPALARRVKDQRGIVAVLAVLQLVGLCGLLFAPMHG--- 287 (355)
T ss_pred HHHHHHHHH------cCCCHHHHHHHHHHHHHHHHHHHH-hHHHHHhhhccchHHHHHHHHHHHHHHHHHHHhhhhH---
Confidence 778877753 688999999999999999999998 8899999994 56666666666666655554433211
Q ss_pred HHHHHHHHHHHHhhhhHHHHhHHHHHHhhc-CCcchhhHHhHHHHHHHHHHHHHhhhHHHHHHHHhh
Q 011783 373 LAFLLNCASVVKNLLSVSIITGLFILQNRA-VDQDQRGAANGIAMTGMSLFKAAGPAGGGALFSWAQ 438 (477)
Q Consensus 373 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~~ 438 (477)
.+ . ...+.+++.+...+...+...+. .+++++++..++.+....++.+++|.+.|.+.|+.+
T Consensus 288 ~~--~--~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~gp~~~G~l~~~~g 350 (355)
T TIGR00896 288 LW--A--WALVLGLGQGGAFPLALTLIGLRSRQAAQAAALSAMAQSIGYLLAALGPLFVGVLHDISG 350 (355)
T ss_pred HH--H--HHHHHHHhhhhHhHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 11 1 12334566666677766655543 445778999999999999999999999999999873
No 69
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=99.98 E-value=2.8e-29 Score=238.27 Aligned_cols=357 Identities=13% Similarity=0.118 Sum_probs=253.4
Q ss_pred HHHhhhchhchHhHHHHHHHHhcccccchhhhhhhHHHHHHHHHHHHHHhhhhhhhhhhcCCc----hhhHHHHHHHHHH
Q 011783 50 VLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRK----PVIIMGTASVVIF 125 (477)
Q Consensus 50 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~Grr----~~~~~~~~~~~i~ 125 (477)
.+...++.+++.|.+|.+.+|+|.|..+ +|++.+++.++..++++++|+++||+||| +.+.+...+. .
T Consensus 13 ~~~~~~~~g~~~p~l~~~l~~~g~s~~~------iG~~~~~~~l~~~l~~~~~g~l~dr~g~~~~~~~~~~~~~~~~--~ 84 (382)
T PRK11128 13 YFGYFFAYGVFLPFWSVWLKGQGYTPET------IGLLLGAGLVARFLGSLLIAPRVKDPSQLIPALRLLALLTLLF--A 84 (382)
T ss_pred HHHHHHHHHHHhhhHHHHHHhcCCCHHH------HHHHHHHHHHHHHhhhHHHHHHHhhhcchHHHHHHHHHHHHHH--H
Confidence 4555567788999999999999999999 99999999999999999999999999994 3333222221 2
Q ss_pred HHHHHhhhhHHHHHHHHHHhhhcccchhhH-HHHhhhhccccchhhHHHHHHHHhHHHHHHHHhHHHHhhhccccCCccc
Q 011783 126 NTLFGLSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLF 204 (477)
Q Consensus 126 ~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~~ 204 (477)
......+++++.+++.|++.|++.+...|. .+++.++ +++|+++++......++|.++||++++++.+ .+
T Consensus 85 ~~~~~~~~~~~~l~i~~~l~g~~~~~~~~~~~a~~~~~--~~~~~~a~~~~~~~~~lg~~igp~lgg~l~~-------~~ 155 (382)
T PRK11128 85 VAFWFGAHSFWLLFVAIGLFNLFFSPLVPLTDALANTW--QKQIGLDYGKVRLWGSIAFVIGSALTGKLVS-------WF 155 (382)
T ss_pred HHHHHhcccHHHHHHHHHHHHHHHcccccHHHHHHHHH--HhhccCCcchHHHHHHHHHHHHHHHHHHHHH-------Hc
Confidence 223344688999999999999998887777 7777776 4678899999999999999999999999998 56
Q ss_pred ccccccccccchHHHHHHHHHhhccccccCCCCCCccchhhhhhhhhhccchhhcccCCchhhhhhcchhhHHHHHHHHH
Q 011783 205 SSESLFGKFPYFLPCLCISLFAFGETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKSLLKNWPLMSSIIVYCV 284 (477)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (477)
+|+..|...........+..+..||.+ + +++.++. .++...+.++++|+|.++...+..++
T Consensus 156 g~~~~f~~~~~~~~~~~~~~~~~~~~~---~--~~~~~~~--------------~~~~~~~~~~i~~~~~~~~~~~~~~l 216 (382)
T PRK11128 156 GEQAILWILTAGVASMLLGQLLRPTIM---P--QGESRQQ--------------ESAGWPAWKALLKEPTVWRFLLCVSL 216 (382)
T ss_pred ChhHHHHHHHHHHHHHHHHHHccCCCC---C--ccccccc--------------cccccchHHHHHcChhHHHHHHHHHH
Confidence 666655211111111111111122211 0 0000000 11123467889999999988777777
Q ss_pred HHhhhhhhHHHHHHhhcCcccCCccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHH
Q 011783 285 FSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTIPLLTSYPY 364 (477)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 364 (477)
..........+.+.|..+ .|.++.+.|.+.+...+..++... ..+++.||+++++.+..+.....+....+..
T Consensus 217 ~~~~~~~~~~~~~~~~~~------~g~s~~~~g~~~~~~~~~~~~~~~-~~g~l~~r~~~~~~l~~~~~~~~~~~~~~~~ 289 (382)
T PRK11128 217 LQGSHAAYYGFSAIYWQA------AGYSASTIGYLWSLGVVAEVLIFA-FSNRLFRRWSARDLLLLSAICGVVRWGLMGS 289 (382)
T ss_pred HHHHhHhHHHHHHHHHHH------CCCCHhHHHHHHHHHHHHHHHHHH-HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHh
Confidence 666666666777777643 688999999999988888888877 8899999999999988888777776655544
Q ss_pred HHHhhhhhHHHHHHHHHHHHhhhhHHHHhHHHHHHhhcCCcchhhHHhHHHHH-HHHHHHHHhhhHHHHHHHHhhhhccc
Q 011783 365 IAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIAMT-GMSLFKAAGPAGGGALFSWAQKRLDA 443 (477)
Q Consensus 365 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~-~~~~g~~~~~~~~g~l~~~~~~~~~~ 443 (477)
..+ .+ ...+..++.++..+...+....+..+. +++++++..+..+. ...+|..+||.++|.++|..
T Consensus 290 ~~~-----~~-~~~~~~~l~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~ig~~i~G~l~~~~------ 356 (382)
T PRK11128 290 TTA-----LP-WLIVIQILHCGTFTVCHLAAMRYIAAR-PGSEVIRLQALYSALAMGGSIAIMTVLSGFLYQHL------ 356 (382)
T ss_pred hhh-----HH-HHHHHHHHHHHHHHHHHHHHHHHHHHC-CHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc------
Confidence 322 12 223344445666666677777777775 56678999998874 45777899999999999987
Q ss_pred cCCCCchHHHHHHHHHHHHHHHHH
Q 011783 444 SFLPGSQMVFFVLNVVEAIGVLMT 467 (477)
Q Consensus 444 ~~~~g~~~~~~~~~~~~~~~~~~~ 467 (477)
|+ ..|+..+++.+++.++.
T Consensus 357 ----g~-~~~~~~~~~~~~~~~~~ 375 (382)
T PRK11128 357 ----GA-GVFWVMALVALPALFIR 375 (382)
T ss_pred ----cH-HHHHHHHHHHHHHHHHH
Confidence 55 46666666666554443
No 70
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=99.98 E-value=2e-30 Score=245.58 Aligned_cols=352 Identities=14% Similarity=0.088 Sum_probs=246.1
Q ss_pred HHHHHHHHHHhhhchhchHhHHHH-HHHHhcccccchhhhhhhHHHHHHHHHHHHHHhhhhhhhhhhcCCchhhHHHHHH
Q 011783 43 LFSIWIIVLCTALPISSLFPFLYF-MIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTAS 121 (477)
Q Consensus 43 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~s~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~Grr~~~~~~~~~ 121 (477)
++..+++.++.........+.+|. +.+++|.++.+ .+++.+++.+++.+++++.|+++||+|||+.+.++.++
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~------~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~ 76 (366)
T TIGR00886 3 LFFSWFGFFLSFSVWFAFSPLAVQMIKDDLGLSTAQ------LGNLVAVPVLAGAVLRIILGFLVDKFGPRYTTTLSLLL 76 (366)
T ss_pred hHHHHHHHHHHHHHHHHhHHhhhHHHHHHhCCCHHH------hhHhhHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHH
Confidence 456777888888888999999995 99999999999 99999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhh-hHHHHHHHHHHhhhcccchhhHHHHhhhhccccchhhHHHHHHHHhHHHHHHHHhHHHHhhhc----
Q 011783 122 VVIFNTLFGLSV-NFWMAVLTRFLLGSLNGLLGPIKAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQP---- 196 (477)
Q Consensus 122 ~~i~~~~~~~~~-~~~~l~~~r~l~G~~~g~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~---- 196 (477)
..++.+++++++ +++.+++.|+++|++.+...+..++++|++|+++|++++++.....++|..+++.+++.+...
T Consensus 77 ~~i~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~~ 156 (366)
T TIGR00886 77 LAIPCLWAGLAVQSYSVLLLLRLFIGIAGGSFASCMPWISFFFPKKIQGTALGLAAGWGNMGGGVAQFVMPPIIGSLIFG 156 (366)
T ss_pred HHHHHHHHHHHhhhHHHHHHHHHHHHHhchhhHhHHHHHHHhcCHhhhhHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhc
Confidence 999999999999 999999999999998776655588999999999999999999988888888888888776542
Q ss_pred -----cccCCcccccccccccccchHHHHHHHHHhhccccccCCCCCCccchhhhhhhhhhccchhhcccCCchhhhhhc
Q 011783 197 -----AEKYPNLFSSESLFGKFPYFLPCLCISLFAFGETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKSLLK 271 (477)
Q Consensus 197 -----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 271 (477)
..+||+.+.+.. ........++.....+|.++.++++++... ++ .... .+++.....++.++
T Consensus 157 ~~~~~~~~w~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~---~~~~---~~~~~~~~~~~~~~ 223 (366)
T TIGR00886 157 AGLPAHLAWGWAFVIVP----AGILLLPALLIFFVGADTPPGKPATGKLSF---KG---ARWS---VGTGALGDQLKVFR 223 (366)
T ss_pred ccccccccccchhHHHH----HHHHHHHHHHHHHhcccCCcccccchhccc---cc---cccc---ccchhHHHHHHHHh
Confidence 124444432110 001112222223334444432111110000 00 0000 00111124566788
Q ss_pred chhhHHHHHHHHHHHhhhhhhHHHHHHhhcCcccCCccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHH
Q 011783 272 NWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIA 351 (477)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 351 (477)
+|+++...+..++..........+.+.|..+. +|+++.+.+.+.....+..+++.+ +.+++.||+++|+....+
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~g~~~~~~~~~~~~~~~~~~~~~~-~~g~l~~r~g~~~~~~~~ 297 (366)
T TIGR00886 224 DRHTWILALLYSVTFGSFLGVSSIFAMFFKDQ-----FGLSKVTAGAYASLGGLLGSLARP-LGGAISDRLGGARKLLMS 297 (366)
T ss_pred ccchhhHHHHHHHHHHHHHHHHHHHHHHHHHH-----cCCcHHHHHHHHHHHHHHHHHHhh-ccchHHHhhccchhHHHH
Confidence 88888877777666666667777788777654 788999999999888898998887 889999999998877777
Q ss_pred HHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhhhhHHHHhHHHHHHhhcCCcchhhHHhHHHHHHHHHH
Q 011783 352 GVLTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIAMTGMSLF 422 (477)
Q Consensus 352 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g 422 (477)
......+...+........ ..+ .............+...+.......+..| +++|+++|+.+..+++|
T Consensus 298 ~~~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~~~~~g~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~~g 365 (366)
T TIGR00886 298 FLGVAMGAFLVVLGLVSPL-SLA-VFIVLFVALFFFSGAGNGSTFALVPHIFR-RATGAVSGLVGAIGNLG 365 (366)
T ss_pred HHHHHHHHHHHHhcCCCcc-hHH-HHHHHHHHHHHHhccccchhhhcchhhch-hhcccHHHHHHHhccCC
Confidence 6655555444433222100 111 11111122223333344455666677666 78999999999887765
No 71
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=99.98 E-value=1.9e-29 Score=241.05 Aligned_cols=386 Identities=12% Similarity=0.020 Sum_probs=258.5
Q ss_pred HHHHHHHhhhchhchHhHHH-HHHHHhcccccchhhhhhhHHHHHHHHHHHHHHhhhhhhhhhhcCC-chhhHHHHHHHH
Q 011783 46 IWIIVLCTALPISSLFPFLY-FMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGR-KPVIIMGTASVV 123 (477)
Q Consensus 46 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~s~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~Gr-r~~~~~~~~~~~ 123 (477)
+.+..+..+...++..|.++ .+.+++|.+..+ +|++.+++.++..++++++|+++||+|| |+++.++.++..
T Consensus 7 ~~~~~~~~~~~~~~~~~~l~~~l~~~~g~s~~~------iGl~~a~~~~~~~i~~~~~g~l~dr~g~~r~~~~~~~~~~~ 80 (418)
T TIGR00889 7 LKFMSFLQWFIWGSWLVTLGSYMSKTLHFSGAE------IGWVYSSTGIAAILMPILVGIIADKWLSAQKVYAVCHFAGA 80 (418)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHH
Confidence 56667777788888877766 666789999999 9999999999999999999999999965 778888888888
Q ss_pred HHHHHHHhhhhHHHHHHHHHHhhhcccchhhH-HHHhh--------hhccccchhhHHHHHHHHhHHHHHHHHhHHHHhh
Q 011783 124 IFNTLFGLSVNFWMAVLTRFLLGSLNGLLGPI-KAYAC--------EIFREEHQALGLSTVSTAWGIGLIIGPALGGFLA 194 (477)
Q Consensus 124 i~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~-~~~i~--------~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~ 194 (477)
+...+..+.++++.+++.|++.|++.+...+. .++.. |......|.+..| .+|.++||.+++.+.
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~g~~~~~~~~~~r~~G------~lG~~ig~~l~g~l~ 154 (418)
T TIGR00889 81 LLLFFAAQVTTPAGMFPVLLANSLAYMPTIALTNSISYANLPQAGLDVVTDFPPIRVMG------TIGFIAAMWAVSLLD 154 (418)
T ss_pred HHHHHHHHhcCHHHHHHHHHHHHHHHccHHHHHHHHHHHHHhhcCCCchhcCCCeeeeh------hHHHHHHHHHHHHhc
Confidence 88888888899999999999999987766554 44432 2233334445544 468888888888773
Q ss_pred hccccCCcccccccccccccchHHHHHHHHHhhccccccCCCCCCccchhhhhhhhhhccchhhcccCCchhhhhhcchh
Q 011783 195 QPAEKYPNLFSSESLFGKFPYFLPCLCISLFAFGETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKSLLKNWP 274 (477)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 274 (477)
. ...|. ..+ .......+..+..+.+||.++.+++ ++.+ . +++.+...++++|+|.
T Consensus 155 ~-~~~~~------~f~-~~~~~~~~~~~~~~~~~e~~~~~~~--~~~~-~--------------~~~~~~~~~~~~k~~~ 209 (418)
T TIGR00889 155 I-ELSNI------QLY-ITAGSSALLGVFALTLPDIPVAKST--AKMS-I--------------KVMLGLDAFILFKNKR 209 (418)
T ss_pred c-cchhH------HHH-HHHHHHHHHHHHHhcCCCCCCCccc--cccC-H--------------HHHhhhhHHHHhcCCC
Confidence 2 11122 111 0111111122223345554321110 0000 0 1111123456788888
Q ss_pred hHHHHHHHHHHHhhhhhhHHHHHHhhcCcccCCc--cccchhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHH
Q 011783 275 LMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGG--LNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAG 352 (477)
Q Consensus 275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 352 (477)
++...+..++..........+.+.|..+...... -+++....+...+...+..+++.. ..+++.||+|+|+.+..+.
T Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~g~~~~~~~i~~i~~~~-~~g~l~dr~g~r~~l~~~~ 288 (418)
T TIGR00889 210 MAIFFFFSMLLGAPLQITNIFGNGFLHEFGRNPEFADSFVVKNASIWMSLSQFSEIFFIL-TIPFFLKRFGIKKVMLLSL 288 (418)
T ss_pred eeeHHHHHHHHHhHHHHHHHhHHHHHHHhcccccccchhhhhhHHHHHHHHHHHHHHHHH-HHHHHHHHhCcHHHHHHHH
Confidence 8777777666554444444555555543100000 123446679999999999999987 8899999999999999998
Q ss_pred HHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhhhhHHHHhHHHHHHhhcCCcchhhHHhHHHH-HHHHHHHHHhhhHHH
Q 011783 353 VLTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIAM-TGMSLFKAAGPAGGG 431 (477)
Q Consensus 353 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~-~~~~~g~~~~~~~~g 431 (477)
++..+....+..... .......+.+..++.+++.+...+....++.+.+|++.|++++|+.+ ....+|.++||.+.|
T Consensus 289 ~~~~v~~~l~~~~~~--~~~~~~~l~l~~~l~g~~~~~~~~~~~~~i~~~~p~~~~g~~~g~~~~~~~~lg~~iGp~l~G 366 (418)
T TIGR00889 289 VAWALRFGFFAYGDP--EYFGYALLFLSMIVYGCAFDFFNISGSVFVEKEVPVHIRASAQGLFTLMCNGFGSLLGYILSG 366 (418)
T ss_pred HHHHHHHHHHHHcCc--chhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHhhHHHHHHHHHH
Confidence 888777655544211 11112223334444555566667777888999999999999999997 567899999999999
Q ss_pred HHHHHhhhhccccCCCCchHHHHHHHHHHHHHHHHHhhhhhhccC
Q 011783 432 ALFSWAQKRLDASFLPGSQMVFFVLNVVEAIGVLMTFKPFLAQRH 476 (477)
Q Consensus 432 ~l~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 476 (477)
.++++.+.... .||+..|.+.+++.+++.++.++ +.+|++
T Consensus 367 ~l~~~~g~~~~----~~~~~~f~~~~~~~~i~~~l~~~-~~~~~~ 406 (418)
T TIGR00889 367 VMVEKMFAYGT----FDWQTMWLFFAGYIAILAVLFMI-FFKYSH 406 (418)
T ss_pred HHHHHhccccC----CchHHHHHHHHHHHHHHHHHHHH-HhCCcc
Confidence 99998633110 05888999888887777766655 455543
No 72
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=99.98 E-value=4e-29 Score=237.82 Aligned_cols=356 Identities=12% Similarity=0.082 Sum_probs=257.3
Q ss_pred HHHHHHHHHHHhhhchhchHhHHHHHHHHhcccccchhhhhhhHHHHHHHHHHHHHHhhhhhhhhhhcCCchhhHHHHHH
Q 011783 42 ELFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTAS 121 (477)
Q Consensus 42 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~Grr~~~~~~~~~ 121 (477)
.+..++...++..+..+...+.+|.+++++|.++.+ .|++.+.+.+++.+++++.|++.||+|||+++..+.++
T Consensus 4 ~~~~~~~~f~~~G~~~~~~~~l~~~~~~~~~~s~~~------~g~l~s~~~~g~~i~~~~~g~l~~r~G~r~~~~~g~~l 77 (410)
T TIGR00885 4 PFALITSLFALWGFANDITNPMVPQFQQAFTLTAFQ------AALVQSAFYGGYFIMAIPAAIFMKKLSYKAGILLGLFL 77 (410)
T ss_pred HHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHH
Confidence 356677778888888899999999999999999999 99999999999999999999999999999999999999
Q ss_pred HHHHHHHHHh---hhhHHHHHHHHHHhhhcccchhhH-HHHhhhhccccchhhHHHHHHHHhHHHHHHHHhHHHHhhhcc
Q 011783 122 VVIFNTLFGL---SVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPA 197 (477)
Q Consensus 122 ~~i~~~~~~~---~~~~~~l~~~r~l~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~ 197 (477)
++++.+++.. .++++.+++.|++.|+|.|...+. .+++.+..|+++|++.+++.+...++|..+||.+++.+....
T Consensus 78 ~~~g~~l~~~~~~~~~~~~~l~~~~l~G~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~~g~~i~~~l~~~~ 157 (410)
T TIGR00885 78 YALGAFLFWPAAEIMNYTLFLVGLFILTAGLGFLETAANPYILVMGPESTATRRLNLAQSFNPFGSIIGMVVAQQLILSN 157 (410)
T ss_pred HHHHHHHHHHHHhhccHHHHHHHHHHHHhhHHHHHhhhhHHHHHHCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 9999888654 358999999999999999998877 999999999999999999999999999999999999886421
Q ss_pred cc--C-----------------CcccccccccccccchHHHHHHHHHhhccccccCCCCCCccchhhhhhhhhhccchhh
Q 011783 198 EK--Y-----------------PNLFSSESLFGKFPYFLPCLCISLFAFGETLHRHNDDDDSCDVSYDALESASAEVKEE 258 (477)
Q Consensus 198 ~~--~-----------------~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (477)
.+ . ....+||..+.......... ..++.....|+ .+++++ +
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~fl~~a~~~~~~-~~~~~~~~~p~--~~~~~~-~---------------- 217 (410)
T TIGR00885 158 LPHQSQDVLDKLSPEELSAIKHSDLASVQTPYMIIGAVVLAV-ALLIMLTKMPA--LNHSDA-K---------------- 217 (410)
T ss_pred CccchhhhhhhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHhcCCC--CCcccc-c----------------
Confidence 10 0 01235666552111111111 11111111111 000000 0
Q ss_pred cccCCchhhhhhcchhhHHHHHHHHHHHhhhhhhHHHHHHhhcCcccCCccccchhhhHHHHHHHHHHHHHHHHHHHHHH
Q 011783 259 EGREATPKKSLLKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFL 338 (477)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l 338 (477)
+.+.....++++|+|.++...+..+++.....+..++++.|..+. ..+.+....+...+.......++++ +++++
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~~l~~f~yvg~e~~~~s~l~~y~~~~----~~~~~~~~a~~~~~~~~~~~~vGR~-~~~~l 292 (410)
T TIGR00885 218 QISFSASLSRLARIRHYREGVIAQFFYVGVQIMCWTFIIQYAVRL----IPGMTAGFAANYNIGAMVIFFISRF-IGTWL 292 (410)
T ss_pred cccchhhHHHHHhChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhc----cCCCCHHHHHHHHHHHHHHHHHHHH-HHHHH
Confidence 111112445678899988888888887777767777777776531 1244444455556555667778887 89999
Q ss_pred HHhhcchhHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhhhhHHHHhHHHHHHhhcCCcchhhHHhHHHHHH
Q 011783 339 ERILGPIMVARIAGVLTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIAMTG 418 (477)
Q Consensus 339 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~ 418 (477)
.||+++|+.+.....+..+..++...... .. ......+.+++.+..+|..++...+..+++.+..+.++...
T Consensus 293 ~~r~~~~~~l~i~~~~~~~~~ll~~~~~~---~~----~~~~l~~~glf~s~~fp~i~sl~~~~~g~~~~~~s~~l~~~- 364 (410)
T TIGR00885 293 ISYLAAHKVLMAYAIIGMALCLGSIFAGG---HV----GLYCLTLCSAFMSLMFPTIYGIALKGLGQDTKYGAAGLVMA- 364 (410)
T ss_pred HHHcCHHHHHHHHHHHHHHHHHHHHHcCC---hH----HHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhHHHHHHH-
Confidence 99999999888877777766666554332 11 12223333567778889999999998987665445555443
Q ss_pred HHHHHHHhhhHHHHHHHHh
Q 011783 419 MSLFKAAGPAGGGALFSWA 437 (477)
Q Consensus 419 ~~~g~~~~~~~~g~l~~~~ 437 (477)
.+|+++.|.+.|.+.|..
T Consensus 365 -~~Gga~~p~l~G~~~d~~ 382 (410)
T TIGR00885 365 -IIGGGIVPPLQGFIIDMK 382 (410)
T ss_pred -HhccchHHHHHHHHHHHh
Confidence 399999999999999954
No 73
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.97 E-value=1.7e-30 Score=246.10 Aligned_cols=367 Identities=17% Similarity=0.217 Sum_probs=269.5
Q ss_pred HHhcccccchhhhhhhHHHHHHHHHHHHHHhhhhhhhhhhcCCchhhHHHHHHHHHHHHHHHhhh--hHHHHHHHHHHhh
Q 011783 69 KDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLSV--NFWMAVLTRFLLG 146 (477)
Q Consensus 69 ~~~~~s~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~Grr~~~~~~~~~~~i~~~~~~~~~--~~~~l~~~r~l~G 146 (477)
.+++.+.++ .|++.+.++.|+.+++++.|+++||+|.|+++..+.++.++++++...+. +++.+++.|++||
T Consensus 66 ~~~~ws~~~------k~~i~ss~~~G~i~~~iP~g~l~~k~G~r~v~~~~~~~sa~~t~l~P~aa~~~~~~~~~~R~lqG 139 (466)
T KOG2532|consen 66 GEYDWSSTE------KGLIFSSFFWGYILGQIPGGYLADKFGARRVFFISGLISALLTLLTPLAASIGFYLLLVLRFLQG 139 (466)
T ss_pred ceecCCHHH------HHHHHHHHHHHHHHHHcCcHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHHhcchhhHHHHHHhH
Confidence 357777777 99999999999999999999999999999999999999999999998875 5568899999999
Q ss_pred hcccchhhH-HHHhhhhccccchhhHHHHHHHHhHHHHHHHHhHHHHhhhccccCCcccccccccccccchHHHHHHHH-
Q 011783 147 SLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSESLFGKFPYFLPCLCISL- 224 (477)
Q Consensus 147 ~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 224 (477)
++.|...|+ ..+.+.|.|++||++..++...+..+|.+++.+++|++.+...||++.|+..+.. .....++.
T Consensus 140 l~~g~~~pa~~~i~~~W~P~~Ers~~~ail~~g~q~g~v~~mp~sg~lc~s~~GW~sifY~~g~~------g~i~~~~w~ 213 (466)
T KOG2532|consen 140 LGQGVLFPAIGSILAKWAPPNERSTFIAILTAGSQLGTIITMPVSGLLCESSLGWPSIFYVFGIV------GLIWFILWF 213 (466)
T ss_pred HHHhHHHhhhhceeeeECCHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhccCCCCchHHHHHHHH------HHHHHHHHH
Confidence 999999998 9999999999999999999999999999999999999999544555555433222 22222222
Q ss_pred HhhccccccCCCCCCccchhhhhhhhhhccchhhcccCCchhhhhhcchhhHHHHHHHHHHHhhhhhhHHHHHHhhcCcc
Q 011783 225 FAFGETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKSLLKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPK 304 (477)
Q Consensus 225 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (477)
++..|+|..++.-.++ +.+.+++...+... +++.+.+++++++++.+|...+..++.......+..+.|.|+.++
T Consensus 214 ~~~~d~P~~h~~is~~---El~~I~~~k~~~~~-~~~~~vP~~~i~ts~~vwai~~~~f~~~~~~~~l~~y~PtY~~~V- 288 (466)
T KOG2532|consen 214 LFYSDSPSKHPNISEK---ELKYIEKGKSEAHV-KKKPPVPYKAILTSPPVWAIWISAFGGNWGFYLLLTYLPTYLKEV- 288 (466)
T ss_pred HHhcCCcccCCCCCHH---HHHHHHhccccccc-CCCCCCCHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHH-
Confidence 2222444332211111 11222222221111 112577899999999999999999999999999999999999987
Q ss_pred cCCccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcc---------hhHHHHHHHHHHHHHHHHHHHHHhhhhhHHH
Q 011783 305 KLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGP---------IMVARIAGVLTIPLLTSYPYIAMLSGFGLAF 375 (477)
Q Consensus 305 ~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 375 (477)
+|++..+.|++.++..+...+..+ +++.++||..+ |..-.++....++.++.+.+...........
T Consensus 289 ----L~f~v~~~G~~salP~l~~~~~k~-~~g~lsD~l~~~~ls~t~~rkifn~i~~~~~ai~l~~l~~~~~~~~~~a~~ 363 (466)
T KOG2532|consen 289 ----LGFDVRETGFLSALPFLAMAIVKF-VAGQLSDRLTFRILSETTVRKIFNTIAFGGPAVFLLVLAFTSDEHRLLAVI 363 (466)
T ss_pred ----hCCChhhhhHHHHHHHHHHHHHHH-HHHHHHHHHhhccCchHhHHHHHHhHHHHHHHHHHHeeeecCCCcchHHHH
Confidence 899999999999999999999988 99999998755 2223344455555555555555433211122
Q ss_pred HHHHHHHHHhhhhHHHHhHHHHHHhhcCCcchhhHHhHHHHHHHHHHHHHhhhHHHHHHHHhhhhccccCCCCchHHHHH
Q 011783 376 LLNCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIAMTGMSLFKAAGPAGGGALFSWAQKRLDASFLPGSQMVFFV 455 (477)
Q Consensus 376 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~g~~~~~~~ 455 (477)
.+.+...+ .+...+..+.-..+. .++..+..+|+.+....+.++++|.+.|.+.... +.. .|+.+|++
T Consensus 364 ~l~~~~~~----~g~~~~Gf~~~~~~~-apq~a~~l~g~~~~~~~~~~~~~P~~vg~~~~~~-t~~------eW~~VF~i 431 (466)
T KOG2532|consen 364 LLTIAIGL----SGFNISGFYKNHQDI-APQHAGFVMGIINFVGALAGFIAPLLVGIIVTDN-TRE------EWRIVFLI 431 (466)
T ss_pred HHHHHHHH----cccchhhhHhhhhhc-cchHHHHHHHHHHHHHHHHHHHHHHheeeEeCCC-CHH------HHHHHHHH
Confidence 22222221 122222222222222 4688999999999999999999999999998521 221 69999999
Q ss_pred HHHHHHHHHHHHhh
Q 011783 456 LNVVEAIGVLMTFK 469 (477)
Q Consensus 456 ~~~~~~~~~~~~~~ 469 (477)
.+++.+++.+...+
T Consensus 432 ~a~i~~~~~i~f~~ 445 (466)
T KOG2532|consen 432 AAGILIVGNIIFLF 445 (466)
T ss_pred HHHHHHHhchheeE
Confidence 99999998866544
No 74
>PRK09528 lacY galactoside permease; Reviewed
Probab=99.97 E-value=3.3e-29 Score=241.04 Aligned_cols=381 Identities=13% Similarity=0.075 Sum_probs=243.4
Q ss_pred hHHHHHHHHHHHhhhchhchHhHHHHH-HHHhcccccchhhhhhhHHHHHHHHHHHHHHhhhhhhhhhhcCCchhhHHHH
Q 011783 41 TELFSIWIIVLCTALPISSLFPFLYFM-IKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGT 119 (477)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~s~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~Grr~~~~~~~ 119 (477)
+.++.+....++..+..+...+.+|.+ .+++|.+..+ +|++.+++.++..++++++|+++||+|||++++++.
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~------~g~~~s~~~l~~~i~~~~~G~l~Dr~g~r~~~~~~~ 83 (420)
T PRK09528 10 PNYWIFSLFFFFFFFIWSSWFSFFPIWLHDINGLSGTD------TGIIFSANSLFALLFQPLYGLISDKLGLKKHLLWII 83 (420)
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHH
Confidence 356666677788888888888999854 5559999999 999999999999999999999999999999998877
Q ss_pred HHHHHHHHHHH---hhh-----hHHHHHHHHHHhhhcccchhhH-HHHhhhhccccchhhHHHHHHHHhHHHHHHHHhHH
Q 011783 120 ASVVIFNTLFG---LSV-----NFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALG 190 (477)
Q Consensus 120 ~~~~i~~~~~~---~~~-----~~~~l~~~r~l~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~ 190 (477)
.+.++...... .++ .+...++.+++.|.+.....+. ..+..+ . .+++++.++......++|..++|+++
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~g~~~g~~~~~~~~g~~i~~~~~ 161 (420)
T PRK09528 84 SGLLVLFGPFFIYVFAPLLQYNILLGAIVGGIYLGFGFLAGAGAIEAYIER-V-SRRSGFEYGRARMWGSLGWALCAFIA 161 (420)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhccchhhhhhHHHH-H-HhhccccchhhHHhhhHHHHHHHHHH
Confidence 66655433221 111 1111223333344333333333 333322 2 34677888999999999999999999
Q ss_pred HHhhhccccCCcccccccccccccchHHHHHHHHHhhccccccCCCCCCccchhhhhhhhhhccchhhcccCCchhhhhh
Q 011783 191 GFLAQPAEKYPNLFSSESLFGKFPYFLPCLCISLFAFGETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKSLL 270 (477)
Q Consensus 191 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 270 (477)
+.+.+. +|++.|.. ........+...+..++.+++++..+++.+ ++++....+..++.+
T Consensus 162 g~l~~~--~~~~~f~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~l 220 (420)
T PRK09528 162 GILFNI--NPQINFWL------GSGSALILLVLLFFAKPDAPSTAKVANALG-------------ANASAVSLKDALALL 220 (420)
T ss_pred HHHHhc--CchHhHHH------HHHHHHHHHHHHhcccccccchhhhccchh-------------cccccccHHHHHHHc
Confidence 998762 34333211 111111111111122111111000000000 000111123345677
Q ss_pred cchhhHHHHHHHHHHHhhhhhhHHHHHHhhcCcccCCccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHH
Q 011783 271 KNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARI 350 (477)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 350 (477)
|+|.++...+..+........+....+.|..+.. .+.+.+..+.|.+.+...+...++.+ ..+++.||+++|+.+..
T Consensus 221 ~~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~g~~~~~~~~~~~~~~~-~~g~l~dr~g~~~~~~~ 297 (420)
T PRK09528 221 KLPKFWFLVLYVIGVACFYDVFDQQFPNFFASFF--ATPEQGTRVFGYLNSFQVFLEALIMF-FAPFIINRIGAKNALLL 297 (420)
T ss_pred cCCCeEeehHHHHHHHHHHHHHHHHHHHHHHHHH--hccCcchHHHHHHHHHHHHHHHHHHH-HHHHHHHHhCcchhhHH
Confidence 8888776555444443333444445666654321 12356677889999988888888887 89999999999999888
Q ss_pred HHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhhhhHHHHhHHHHHHhhcCCcchhhHHhHH-HHHHHHHHHHHhhhH
Q 011783 351 AGVLTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGI-AMTGMSLFKAAGPAG 429 (477)
Q Consensus 351 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~-~~~~~~~g~~~~~~~ 429 (477)
+..+..+....+.+..+ . + .+.....+.+.......+....+..+..|++.+++..+. .++...+|.+++|.+
T Consensus 298 ~~~l~~~~~~l~~~~~~---~--~-~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~lg~~ig~~~ 371 (420)
T PRK09528 298 AGTIMAVRIIGSGFATG---P--L-EVSILKLLHAFEVPFLLVGVFKYITLNFDVRLSATIYLVGFQFAKQLGAVFLSTL 371 (420)
T ss_pred HHHHHHHHHHHHHhccc---H--H-HHHHHHHHHHHHHHHHHHHHHHHHHHHcCccceeeeeeehHHHHHHHHHHHHHHH
Confidence 88877776666554332 1 1 122233333444455556666788888999999988766 677889999999999
Q ss_pred HHHHHHHhhhhccccCCCCchHHHHHHHHHHHHHHHHHhh
Q 011783 430 GGALFSWAQKRLDASFLPGSQMVFFVLNVVEAIGVLMTFK 469 (477)
Q Consensus 430 ~g~l~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 469 (477)
.|++.|.. ||+..|...+++.++..++...
T Consensus 372 ~G~l~~~~----------G~~~~f~~~~~~~~i~~~~~~~ 401 (420)
T PRK09528 372 AGNLYDSI----------GFQGTYLILGGIVLLFTLISVF 401 (420)
T ss_pred HHHHHHhh----------CchHHHHHHHHHHHHHHHHHHH
Confidence 99999988 8999999888887776665554
No 75
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=99.97 E-value=7.8e-28 Score=230.03 Aligned_cols=371 Identities=14% Similarity=0.167 Sum_probs=252.6
Q ss_pred HHHHHHHhhhchhchHhHHHHHHHHhcccccchhhhhhhHHHHHHHHHHHHHHhhhhhhhhhhc-----CCch-hhHHHH
Q 011783 46 IWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRY-----GRKP-VIIMGT 119 (477)
Q Consensus 46 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~-----Grr~-~~~~~~ 119 (477)
+...++.+.+..+.....+|.+.++.|.+.++ +|++..+... .+.++++|+++||+ |||| .+..+.
T Consensus 4 ~~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~------ig~~~~~~~~--~~~~~l~g~~~Dr~~~~~~g~rr~~l~~~~ 75 (402)
T PRK11902 4 MLLLGFASGLPLALTSGTLQAWMTVEGLDIQT------IGFFSLVGQA--YIFKFLWAPLMDRYTPPLLGRRRGWLLLTQ 75 (402)
T ss_pred HHHHHHHHhhhHHHHHHHHHHHHHHcCCCHHH------HHHHHHHHHH--HHHHHHHHHHHHcccccCCCcchhHHHHHH
Confidence 34556777788888999999999999999999 9999777765 59999999999999 8876 788888
Q ss_pred HHHHHHHHHHHhh---hhHHHHHHHHHHhhhcccchhhH-HHHhhhhccccchhhHHHHHHHHhHHHHHHHHhHHHHhhh
Q 011783 120 ASVVIFNTLFGLS---VNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQ 195 (477)
Q Consensus 120 ~~~~i~~~~~~~~---~~~~~l~~~r~l~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~ 195 (477)
++.+++..+.++. .+++.+++..++.++..+...+. .+++.|++|+|||+++.++...+..+|.++++.+++.+.+
T Consensus 76 ~~~~l~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~al~~~~~~~~~r~~~~~~~~~g~~~g~i~g~~l~~~l~~ 155 (402)
T PRK11902 76 VGLAASIAAMAFCPPHAALWPLAGLAVLVAFLSASQDIVFDAYSTDVLHPEERGAGAAVKVLGYRLAMLVSGGLALWLAD 155 (402)
T ss_pred HHHHHHHHHHHhcCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhhhhHHHHHHHHHHHHHHHHHhHHHHHHHh
Confidence 8888888877776 35788888888888888888887 9999999999999999999999999999999999998877
Q ss_pred ccccCCcccccccccccccchHHHHHHHHHhhccccccCCCCCCccchhhhhhhhhhccchhhcccCCchhhhhhcchhh
Q 011783 196 PAEKYPNLFSSESLFGKFPYFLPCLCISLFAFGETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKSLLKNWPL 275 (477)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 275 (477)
.. ++||..|...........+..+..||++++++++ +.. +++.....++++|+|.+
T Consensus 156 ~~------~gw~~~f~i~a~~~l~~~l~~~~~~e~~~~~~~~----~~~--------------~~~~~~~~~~l~~~~~~ 211 (402)
T PRK11902 156 RV------LGWGNTYLLMAGLMLAGALTTLWAPEPEVPARPP----RSL--------------GEAVVGPLRDFFSRRGA 211 (402)
T ss_pred cc------cCHHHHHHHHHHHHHHHHHHHHhcCCCccccccc----chh--------------HHHHHHHHHHHHhCcCH
Confidence 32 3555555211111111122223344432211100 000 00112356778899998
Q ss_pred HHHHHHHHHHHhhhhhhHHHHHHhhcCcccCCccccchhhhHHHHHHHHH-HHHHHHHHHHHHHHHhhcchhHHHHHHHH
Q 011783 276 MSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGF-SLLVFQLSLYPFLERILGPIMVARIAGVL 354 (477)
Q Consensus 276 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~-~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 354 (477)
+..++..++..........+.+.++.+ ++|+++.+.+.+....+. +.+++.. +.+++.||+++|+.+..+..+
T Consensus 212 ~~~l~~~~l~~~~~~~~~~~~~~~l~~-----~~G~~~~~~g~~~~~~~~~~~i~g~~-~~g~l~~r~g~~~~l~~~~~~ 285 (402)
T PRK11902 212 WALLLLIVLYKLGDAFAGSLSTTFLIR-----GAGFSAGEVGIVNKTLGLAATIVGAL-AGGTLMVRLGLYRSLMLFGVL 285 (402)
T ss_pred HHHHHHHHHHHhHHHHHHHHHHHHHHH-----hcCCCHHHHHHHHhHHHHHHHHHHHH-HHHHHHHHHhHHHHHHHHHHH
Confidence 877766666554333332333333332 378999999998876554 4667766 899999999998887776666
Q ss_pred HHHHHHHHHHHHHhhhhhHHHHHH---HHHHHHhhhhHHHHhHHHHHHhhcCCcchhhHHhHHHHHHHHHHHHHhhhHHH
Q 011783 355 TIPLLTSYPYIAMLSGFGLAFLLN---CASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIAMTGMSLFKAAGPAGGG 431 (477)
Q Consensus 355 ~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g 431 (477)
..+..+.+.......+. .+.... +..+..++...........++++..|.++ .+..+....++..+++.++|
T Consensus 286 ~~l~~l~~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~l~~~~~~~~~G 360 (402)
T PRK11902 286 QAVSNLGYWVLAVTPKH-LWTMALAIGIENLCGGMGTAAFVALLMALCNRSFSATQ----YALLSALASVGRVYVGPTSG 360 (402)
T ss_pred HHHHHHHHHHHHhcCCc-HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcHHH----HHHHHHHHHHHHHHHHHHHH
Confidence 55544333222211111 111111 11123344445556666666666666444 45556666777777777999
Q ss_pred HHHHHhhhhccccCCCCchHHHHHHHHHHHHHHHHHhh
Q 011783 432 ALFSWAQKRLDASFLPGSQMVFFVLNVVEAIGVLMTFK 469 (477)
Q Consensus 432 ~l~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 469 (477)
.+.|.. ||+..|...+++++++.++...
T Consensus 361 ~l~~~~----------G~~~~f~~~~~~~~~~~~~~~~ 388 (402)
T PRK11902 361 YLVEAY----------GWPGFYLMTVVIALPGLALLWL 388 (402)
T ss_pred HHHHHh----------ChHHHHHHHHHHHHHHHHHHHH
Confidence 999998 9999999999888888776554
No 76
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=99.97 E-value=1.9e-28 Score=234.07 Aligned_cols=379 Identities=14% Similarity=0.135 Sum_probs=254.5
Q ss_pred hHHHHHHHHHHHhhhchhchHhHHHHH-HHHhcccccchhhhhhhHHHHHHHHHHHHHHhhhhhhhhhhcCCchhhHHHH
Q 011783 41 TELFSIWIIVLCTALPISSLFPFLYFM-IKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGT 119 (477)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~s~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~Grr~~~~~~~ 119 (477)
+.++.+....++.+.......|.+|.+ .+++|.++.+ .|++.+++.++..+++++.|+++||+|||+.++.+.
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~------~g~~~~~~~l~~~i~~~~~G~l~Dr~grr~~~~~~~ 75 (396)
T TIGR00882 2 TNFWMFGLFFFLYFFIMSAYFPFFPIWLHDVNGLSKTD------TGIVFSCISLFSILFQPLFGLISDKLGLKKHLLWII 75 (396)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHH
Confidence 346667778888888889999999855 5678999999 999999999999999999999999999999999887
Q ss_pred HHHHHHHHHHH---hh-----hhHHHHHHHHHHhhhcccchhhH-HHHhhhhccccchhhHHHHHHHHhHHHHHHHHhHH
Q 011783 120 ASVVIFNTLFG---LS-----VNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALG 190 (477)
Q Consensus 120 ~~~~i~~~~~~---~~-----~~~~~l~~~r~l~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~ 190 (477)
...++...... +. +.+..+++.|++.|++.+...+. ..+..|.. +++++.++......++|.++||.++
T Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~--~~~~~~~g~~~~~~~~g~~~g~~~~ 153 (396)
T TIGR00882 76 SGLLVLFAPFFIYVFGPLLQSNILVGAIVGGLYLGFVFSAGAGAIEAYIEKVS--RNSNFEYGKARMFGCVGWALCASIA 153 (396)
T ss_pred HHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhccchhhHHHHHHHhh--hhcccccchhhhhcccHHHHHHHHH
Confidence 76665443321 11 23345567788899988877776 77776653 3345677888888999999999999
Q ss_pred HHhhhccccCCcccccccccccccchHHHHHHHHHhh-ccccccCCCCCCccchhhhhhhhhhccchhhcccCCchhhhh
Q 011783 191 GFLAQPAEKYPNLFSSESLFGKFPYFLPCLCISLFAF-GETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKSL 269 (477)
Q Consensus 191 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (477)
+.+.+ .+|+..|.... .......+..+.. +|.++++ +.+ ++.+ .++++++..+.+++
T Consensus 154 g~l~~--~~~~~~f~~~~------~~~~~~~~~~~~~~~~~~~~~-----~~~---~~~~------~~~~~~~~~~~~~~ 211 (396)
T TIGR00882 154 GILFS--IDPQIVFWLGS------GFALILMLLLMFAKPKAPSSA-----TVA---NALG------ANASAFSLKLALEL 211 (396)
T ss_pred hhhhc--cCchHHHHHHH------HHHHHHHHHHHHhCCCCchhh-----hhh---cccc------cccCCCCHHHHHHH
Confidence 98865 24443332111 1111111122222 2211110 000 0000 00011122356788
Q ss_pred hcchhhHHHHHHHHHHHhhhhhhHHHHHHhhcCcccCCccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHH
Q 011783 270 LKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVAR 349 (477)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 349 (477)
+|||+++..++..+.............+.|..+... +.+.+....|...+...+...++.. ..+++.||+++|+.+.
T Consensus 212 l~~~~~~~~~l~~~~~~~~~~~~~~~~~~y~~~~~~--~~~~~~~~~g~~~~~~~i~~~~~~~-~~g~l~~r~g~~~~l~ 288 (396)
T TIGR00882 212 FRQRKFWMFVLYVVGVACVYDVFDQQFANFFTSFFA--TPQQGTRVFGYVTTMGELLNALIMF-CAPLIINRIGAKNALL 288 (396)
T ss_pred HcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc--ccccchHHHHHHHHHHHHHHHHHHH-HHHHHHHHhccchhHH
Confidence 899988776666555544444455566667654321 1355666778888888888888877 8899999999999988
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhhhhHHHHhHHHHHHhhcCCcchhhHHhHH-HHHHHHHHHHHhhh
Q 011783 350 IAGVLTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGI-AMTGMSLFKAAGPA 428 (477)
Q Consensus 350 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~-~~~~~~~g~~~~~~ 428 (477)
.+..+.++.........+ .+ .+.....+.+.+..........+..+..|++.+++..+. .+....+|++++|.
T Consensus 289 ~~~~l~~l~~~~~~~~~~-----~~-~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~at~~~~~~~~~~~lg~~~~~~ 362 (396)
T TIGR00882 289 IAGTIMSVRIIGSSFATT-----AL-EVVILKMLHAFEVPFLLVGCFKYITSQFDVRLSATIYLIGFQFAKQLAMIFLST 362 (396)
T ss_pred HHHHHHHHHHHHHHhcCC-----hH-HHHHHHHHHHHHHHHHHHHHHHHHHHhCCcceEEEeehHHHHHHHHHHHHHHHH
Confidence 888777776555443221 11 112223333444444444445566777788888887766 67788999999999
Q ss_pred HHHHHHHHhhhhccccCCCCchHHHHHHHHHHHHHHHHHh
Q 011783 429 GGGALFSWAQKRLDASFLPGSQMVFFVLNVVEAIGVLMTF 468 (477)
Q Consensus 429 ~~g~l~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 468 (477)
+.|++.|.. ||+.+|.+.+++.++..+...
T Consensus 363 l~G~l~~~~----------G~~~~f~~~~~~~~i~~~~~~ 392 (396)
T TIGR00882 363 LAGNMYDSI----------GFQGAYLVLGCIVLLFTLISV 392 (396)
T ss_pred hHHHHHHhc----------ccHHHHHHHHHHHHHHHHHHH
Confidence 999999988 899999999888877766544
No 77
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=99.97 E-value=2.5e-28 Score=264.23 Aligned_cols=366 Identities=15% Similarity=0.057 Sum_probs=254.1
Q ss_pred hHHHHHHHHHHHhhhch-hchHhHHHHHHHHhcccccchhhhhhhHHHHHHHHHHHHHHhhhhhhhhhhcCCchhhHHHH
Q 011783 41 TELFSIWIIVLCTALPI-SSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGT 119 (477)
Q Consensus 41 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~s~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~Grr~~~~~~~ 119 (477)
+.+..++++.++..+.. .......+.+.++++.+... ...+++.+++.+++.++++++|+++||+|||++++++.
T Consensus 9 ~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~l~~~l~~~~~G~l~Dr~grk~~l~~~~ 84 (1146)
T PRK08633 9 IGFLPLLLTQFLNAFNDLGHKILIQNTLIKAYDGSEQV----ILTAIVNALFLLPFLLLSSPAGFLADKFSKNRVIRIVK 84 (1146)
T ss_pred hhhHHHHHHHHHhHHHHHHHHHHHHHHHHHHcCcccHH----HHHHHHHHHHHHHHHHHhhhHhhhcccccHHHHHHHHH
Confidence 44555566666655544 34445556677777665433 22789999999999999999999999999999999998
Q ss_pred HHHHHHHHHHH---hhhhHHHHHHHHHHhhhcccchhhH-HHHhhhhccccchhhHHHHHHHHhHHHHHHHHhHHHHhhh
Q 011783 120 ASVVIFNTLFG---LSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQ 195 (477)
Q Consensus 120 ~~~~i~~~~~~---~~~~~~~l~~~r~l~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~ 195 (477)
++..+..++.. .+++++.+++.|+++|++.+...+. .++++|++|+++|++++++.+.+..+|.++|+++++++..
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~ig~~lg~~l~~~l~~ 164 (1146)
T PRK08633 85 LFEVGLTLLIVLAYYLGWFWLAFAVTFLLGAQSAIYSPAKYGIIPELVGKENLSRANGLLEAFTIVAILAGTALFSFLFE 164 (1146)
T ss_pred HHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHhhchHHHhhhHHhcCcccchhhhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 77666555443 4578999999999999999999888 9999999999999999999999999999999999999987
Q ss_pred ccc--cCCcccccccccccc-cchHHHHHHHHHhhccccccCCCCCCccchhhhhhhhhhccchhhcccCCchhhhhhcc
Q 011783 196 PAE--KYPNLFSSESLFGKF-PYFLPCLCISLFAFGETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKSLLKN 272 (477)
Q Consensus 196 ~~~--~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 272 (477)
... +.....+|.+.+... ....++.++..+.+|+.+.....+.++.+.. ........++.++++
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~l~~~ 231 (1146)
T PRK08633 165 SVNGNTPSEILGRIAPAGLVLLAVAVLGLIFAYRLPKVPAAAPEVFDKKKYL-------------FPKLLWRNLKLLRSD 231 (1146)
T ss_pred hhccccccccccchHHHHHHHHHHHHHHHHHHhcCcCCCCCCcccccccccc-------------cHHHHHHHHHHHhcC
Confidence 310 000000111111000 0111111222333455443222110000000 001112345667888
Q ss_pred hhhHHHHHHHHHHHhhhhhhHHHHHHhhcCcccCCccccchh-hhHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHH
Q 011783 273 WPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQ-MVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIA 351 (477)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~-~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 351 (477)
+.++..++..++.......+..+++.|.... +|++.. +.+++.+...++.+++++ +.+++.||.++++.+.++
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~g~s~~~~~g~~~~~~~ig~~~g~~-~~g~l~~r~~~~~~~~~~ 305 (1146)
T PRK08633 232 RVLWLAIIGLSYFWFISQLAQANFPAYAKEV-----LGLDNTFQVQYLLAASAIGIGIGSL-LAGRLSGRHIELGLVPLG 305 (1146)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHhhHHHHHHH-----hCCCcHHHHHHHHHHHHHHHHHHHH-HHHHHhCCceEccchhHH
Confidence 8888777766666655556666777776644 788888 899999999999999988 889999999988888777
Q ss_pred HHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhhhhHHHHhHHHHHHhhcCCcchhhHHhHHHHHHHHHHHHHhhhHHH
Q 011783 352 GVLTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIAMTGMSLFKAAGPAGGG 431 (477)
Q Consensus 352 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g 431 (477)
.++.+++.+.+.+... .....+..++.+++.+...+...+++.+..|++.||+++|+.+++..+|.++++.+++
T Consensus 306 ~~~~~~~~~~~~~~~~------~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~rg~~~~~~~~~~~lg~~~~~~~~~ 379 (1146)
T PRK08633 306 ALGLALSLFLLPTAPS------LASVLVLFFLFGFSAGLFIVPLNALIQFRAPEKELGKVLAANNFLQNVGMLLFLALTT 379 (1146)
T ss_pred HHHHHHHHHHHHHhhh------HHHHHHHHHHHHHHHHHhhHHHHHHHhhcCCccchhhhhHHHHHHHHHHHHHHHHHHH
Confidence 7766666655544332 1123334444556667777778889999999999999999999999999988887776
Q ss_pred HHHH
Q 011783 432 ALFS 435 (477)
Q Consensus 432 ~l~~ 435 (477)
.+..
T Consensus 380 ~l~~ 383 (1146)
T PRK08633 380 LFSG 383 (1146)
T ss_pred HHHH
Confidence 6544
No 78
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=99.97 E-value=1.5e-28 Score=264.80 Aligned_cols=342 Identities=14% Similarity=0.058 Sum_probs=240.5
Q ss_pred hHHHHHHHHHHHHHHhhhhhhhhhhcCCchhhHH---HHHHHHHHHHHHHhhhhHHHHHHHHHHhhhcccchhhH-HHHh
Q 011783 84 AGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIM---GTASVVIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGPI-KAYA 159 (477)
Q Consensus 84 ~g~~~s~~~~~~~~~~~~~G~l~Dr~Grr~~~~~---~~~~~~i~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~-~~~i 159 (477)
.++..+++.+++.++++++|+++||+|||+++.. ..+...+..+.....+++++++++|+++|++.+...|+ .+++
T Consensus 54 ~~l~~~~~~l~~~l~~~~~G~laDr~~rk~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~~~~l~gi~~a~~~p~~~a~l 133 (1140)
T PRK06814 54 VTLAGAVFILPFFIFSALAGQLADKYDKAKLAKILKFAEIGIAALAIYGFHLNSVPLLFAALFLMGIHSALFGPIKYSIL 133 (1140)
T ss_pred HHHHHHHHHHHHHHHhhhHHhhhhhccHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhhchHHHHhh
Confidence 7889999999999999999999999999998643 22233333333334589999999999999999999998 9999
Q ss_pred hhhccccchhhHHHHHHHHhHHHHHHHHhHHHHhhhccccCCcccccccccccccchHHHHHHHHHhhccccccCCCCCC
Q 011783 160 CEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSESLFGKFPYFLPCLCISLFAFGETLHRHNDDDD 239 (477)
Q Consensus 160 ~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 239 (477)
.|++|+++|++++++.+++.++|.++||+++|++.. .++|+..|.......+..++..+.+|+.+...+..+.
T Consensus 134 ~~~~~~~~~~~a~~~~~~~~~ig~~igp~l~g~l~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 206 (1140)
T PRK06814 134 PDHLNKDELLGANALVEAGTFIAILLGTIIGGLATI-------SGNFVILVALLMGIAVLGWLASLFIPKTGNAAPDLKI 206 (1140)
T ss_pred HhhcCccccchhhHHHHHHHHHHHHHHHHHHHHHHh-------ccccHHHHHHHHHHHHHHHHHHhhCCCCCCCCCCCee
Confidence 999999999999999999999999999999999988 4455544311111112222223334443221111100
Q ss_pred ccchhhhhhhhhhccchhhcccCCchhhhhhcchhhHHHHHHHHHHHhhhhhhHHHHHHhhcCcccCCccccchhhhHHH
Q 011783 240 SCDVSYDALESASAEVKEEEGREATPKKSLLKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEV 319 (477)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~ 319 (477)
+... ..+....++.+.+++.++...+..++..+....+..++|.|+.+. +|.++.+.|.+
T Consensus 207 ~~~~---------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~-----~g~~~~~~g~~ 266 (1140)
T PRK06814 207 DRNI---------------IRSTITLLKYAKADKRIWLAILGISWFWLVGAVVLSQLPLLAKET-----LGGDENVATLF 266 (1140)
T ss_pred ccch---------------HHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHhHHHHHHH-----cCCchHHHHHH
Confidence 0000 001123567788899999888887777766667777888887754 78899999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHHH---------------hhhhhHHHHHHHHHHHH
Q 011783 320 LAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTIPLLTSYPYIAM---------------LSGFGLAFLLNCASVVK 384 (477)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~~~~~~~~ 384 (477)
.+..+++.+++++ +.+++.++..+++.+..+.++..+..+.+.+... ......+ .+.+..++.
T Consensus 267 ~~~~~~g~~ig~~-~~g~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 344 (1140)
T PRK06814 267 LAVFSVGVAVGSF-LASKLSEGRITLLYVPIGALLMGLFGLDLAFASSSVPAEPAQLKSILVFLSKRHGW-RILIDLFGL 344 (1140)
T ss_pred HHHHHHHHHHHHH-HHHHHhCCceeeeeehHHHHHHHHHHHHHHhcccccccccccccchhhhhcccccH-HHHHHHHHH
Confidence 9999999999998 8888887776666555555544444333332100 0001112 233444445
Q ss_pred hhhhHHHHhHHHHHHhhcCCcchhhHHhHHHHHHHHHHHHHhhhHHHHHHHHhhhhccccCCCCchHHHHHHHHHHHHH
Q 011783 385 NLLSVSIITGLFILQNRAVDQDQRGAANGIAMTGMSLFKAAGPAGGGALFSWAQKRLDASFLPGSQMVFFVLNVVEAIG 463 (477)
Q Consensus 385 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 463 (477)
+++.+...+...+++++.+|++.+|+++|+.+++..++..+++.+.|.+.+... ++...+++.+++.++.
T Consensus 345 g~~~~~~~~~~~~~~~~~~p~~~~G~v~g~~~~~~~~~~~ig~~~~g~l~~~~~---------~~~~~~~~~~~~~~~~ 414 (1140)
T PRK06814 345 AAAGGLYIVPLFAALQAWANPAHRARVIAANNVLNAAFMVAGTIILALLQALGF---------SIPWIILFIALANLIV 414 (1140)
T ss_pred HHHHHHhHHHHHHHHHhhCCcccceeeeHHHHHHHHHHHHHHHHHHHHHHHhcc---------CHHHHHHHHHHHHHHH
Confidence 677777778889999999999999999999999999999999999999875431 4555555554443333
No 79
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=99.97 E-value=3.7e-27 Score=228.38 Aligned_cols=405 Identities=13% Similarity=0.081 Sum_probs=263.5
Q ss_pred hHHHHHHHHHHHhhhchhchHhHHHHHHH-H--hcccccchhhhhhhHHHHHHHHHHHHHHhhhhhhhhhh-cCCchhhH
Q 011783 41 TELFSIWIIVLCTALPISSLFPFLYFMIK-D--FQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADR-YGRKPVII 116 (477)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~--~~~s~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~Dr-~Grr~~~~ 116 (477)
+.++.+.+..+++.++.+...+.+|.+.+ + +|.+..+ .|++.+.+.++..++++++|+++|| +|||+++.
T Consensus 10 ~~~~~l~~~~~~~~~~~~~~~~~L~~yl~~~~~lg~s~~~------ag~~~~~~~~~~~~~~~~~G~laDr~~G~~~~l~ 83 (475)
T TIGR00924 10 KPLFTLFFVELWERFSYYGMQGILAVYLVQQAGLGFSQEQ------AFIIFGAYSALVYLLTSVGWWFGDRVWGTKKTMV 83 (475)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCHHH------HHHHHHHHHHHHHHHHhhHHHHHHhhcchHHHHH
Confidence 45677788888999999988999986654 4 8999999 9999999999999999999999999 89999999
Q ss_pred HHHHHHHHHHHHHHhhhhHHHHHHHHHHhhhcccchhhH-HHHhhhhccccc---hhhHHHHHHHHhHHHHHHHHhHHHH
Q 011783 117 MGTASVVIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEH---QALGLSTVSTAWGIGLIIGPALGGF 192 (477)
Q Consensus 117 ~~~~~~~i~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~-~~~i~~~~~~~~---r~~~~~~~~~~~~~g~~~g~~~~~~ 192 (477)
++.++.+++.++.+++++++.+++.|++.|++.|...|. .++++|++|+++ |++++++++.+.++|..+||.++++
T Consensus 84 ~~~~~~~~g~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~niG~~ig~~l~g~ 163 (475)
T TIGR00924 84 LGGIVLMLGHFMLAMSIYPDLIFYGLGTIAVGSGLFKANPSSMVGKLYERGDMPRRDGGFTLFYMSINIGSFISPLLAGV 163 (475)
T ss_pred HHHHHHHHHHHHHHhcccHhHHHHHHHHHHhccccccCCHHHHHHHhcCCCCcccccceehhHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999998887 899999998764 8899999999999999999999999
Q ss_pred hhhccccCCcccccccccccccchHHHHHHHHHhhccccccCCCCCCccchhhhhhhh---------------hh---cc
Q 011783 193 LAQPAEKYPNLFSSESLFGKFPYFLPCLCISLFAFGETLHRHNDDDDSCDVSYDALES---------------AS---AE 254 (477)
Q Consensus 193 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~---------------~~---~~ 254 (477)
+.+ .++|+..|..........++..+...+..++.+.++++.+...++... .. ..
T Consensus 164 l~~-------~~g~~~~f~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (475)
T TIGR00924 164 IAE-------NYGYHVGFNLAAVGMVIGLLTFFAGRHMLRDIGSVPDPLSGQGKTYGKLLLALLAALALVFFCAWLMHHV 236 (475)
T ss_pred HHH-------hcChHHHHHHHHHHHHHHHHHHHHcccccccCCCCCCCcchhhhhhHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 987 445655552111111122222222232221111111100000000000 00 00
Q ss_pred -ch---------------hh-cccCCchhhhhhcchhhHHHHHHHHHHHhhhhhhHHHHHHhhcCcccCCccccchhhhH
Q 011783 255 -VK---------------EE-EGREATPKKSLLKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVG 317 (477)
Q Consensus 255 -~~---------------~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g 317 (477)
.. .+ ..+......+..|...+....+...++........+.++.+..+....+-.++ ....+
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~Q~~s~l~l~~~~~~~~~~~~~-~ip~~ 315 (475)
T TIGR00924 237 VIANILLMTVTLAVIIFFFRLAFKPRLDAVARNKMYAYIVLFLEAVVFWVLYAQMPTSLNFFADNNMHHEMLGM-SVPVI 315 (475)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccCCHHHHhHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHhccccccce-EECHH
Confidence 00 00 00000011111122223333444444444444555555555543211110111 12267
Q ss_pred HHHHHHHHHHHHHHHHHHH---HHHHh-hcchhHH--HHHHHHHHHHHHHHHHHHHhh---hhhHHHHHHHHHHHHhhhh
Q 011783 318 EVLAITGFSLLVFQLSLYP---FLERI-LGPIMVA--RIAGVLTIPLLTSYPYIAMLS---GFGLAFLLNCASVVKNLLS 388 (477)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~---~l~~~-~~~~~~~--~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~ 388 (477)
.+.+.+.+..++.++++.. ++.|| .+++... ..|.++.++++..+....... .......++....+.+++.
T Consensus 316 ~~~~~n~~~iil~~p~~~~~~~~l~~~~~~~~~~~k~~~G~~l~~~~~~~~~~~~~~~~~~~~~s~~~~i~~~~~~~~ge 395 (475)
T TIGR00924 316 WFQSLNPFWVVVGSPVLAMIWTRLGRKGKDPTTPLKFTLGMLFCGASFLTFAASIWFADAGGLTSPWFMVLIYLFQTLGE 395 (475)
T ss_pred HHHhhhHHHHHHHHHHHHHHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHHHHhhcCCCCccCHHHHHHHHHHHHHHH
Confidence 8888888888888774433 34443 2233333 567777776766554321110 1122334555666778899
Q ss_pred HHHHhHHHHHHhhcCCcchhhHHhHHHHHHHHHHHHHhhhHHHHHHHHhhhhccccCCCCchHHHHHHHHHHHHHHHHHh
Q 011783 389 VSIITGLFILQNRAVDQDQRGAANGIAMTGMSLFKAAGPAGGGALFSWAQKRLDASFLPGSQMVFFVLNVVEAIGVLMTF 468 (477)
Q Consensus 389 ~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 468 (477)
....|..+++..+..|++.||+.+|+......+|..+++.+.+...+.. ++...|...++++++..++.+
T Consensus 396 ~~~~p~~~~~~~~~aP~~~~g~~~g~~~l~~~~g~~l~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~ 465 (475)
T TIGR00924 396 LMISPLGLSWWTKIAPQRLMGQMLGMWFLAQAMGSLLGGYLATFGAVPQ----------GVTGVFGKIGLVTLLVGVVMA 465 (475)
T ss_pred HHHhHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc----------chhhHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999988888877665543 566677777766666655554
Q ss_pred h
Q 011783 469 K 469 (477)
Q Consensus 469 ~ 469 (477)
.
T Consensus 466 ~ 466 (475)
T TIGR00924 466 L 466 (475)
T ss_pred H
Confidence 4
No 80
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=99.97 E-value=2e-27 Score=230.13 Aligned_cols=411 Identities=14% Similarity=0.052 Sum_probs=259.3
Q ss_pred hhHHHHHHHHHHHhhhchhchHhHHH-HHHHHhcccccchhhhhhhHHHHHHHHHHHHHHhhhhhhhhhh-cCCchhhHH
Q 011783 40 ITELFSIWIIVLCTALPISSLFPFLY-FMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADR-YGRKPVIIM 117 (477)
Q Consensus 40 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~s~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~Dr-~Grr~~~~~ 117 (477)
++.++.++...+.+.++.+...+.++ ++.+++|.+..+ .+++.+.+.....+..+++|+++|| +||||++++
T Consensus 13 p~~~~~~~~~~~~er~~~y~~~~~l~~yl~~~lg~~~~~------a~~i~~~~~~~~~~~~~~~G~laDr~~G~r~~~~~ 86 (489)
T PRK10207 13 PRPFFMIFFVELWERFGYYGVQGILAVFFVKQLGFSQEQ------AFITFGAFAALVYGLISIGGYVGDHLLGTKRTIVL 86 (489)
T ss_pred ChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHH------HHHHHHHHHHHHHHHHhhHHHhhhhccchHHHHHH
Confidence 46677888888888888888877776 667889999998 9999999998888899999999999 999999999
Q ss_pred HHHHHHHHHHHHHhhhhHHH-HHHHHHHhhhcccchhhH-HHHhhhhcccc--chhhHHHHHHHHhHHHHHHHHhHHHHh
Q 011783 118 GTASVVIFNTLFGLSVNFWM-AVLTRFLLGSLNGLLGPI-KAYACEIFREE--HQALGLSTVSTAWGIGLIIGPALGGFL 193 (477)
Q Consensus 118 ~~~~~~i~~~~~~~~~~~~~-l~~~r~l~G~~~g~~~~~-~~~i~~~~~~~--~r~~~~~~~~~~~~~g~~~g~~~~~~l 193 (477)
+.+++.++.+.++++++... ++++|+++|+|.|...|. .++++|.+|++ +|++++++++.+.++|..+||.+++++
T Consensus 87 g~~~~~~g~~~~~~~~~~~~ll~~~~~l~~ig~g~~~~~~~~li~~~~p~~~~~~~~~~~~~~~~~nig~~~g~~l~g~l 166 (489)
T PRK10207 87 GAIVLAIGYFMTGMSLLKPDLIFIALGTIAVGNGLFKANPASLLSKCYPPKDPRLDGAFTLFYMSINIGSLISLSLAPVI 166 (489)
T ss_pred HHHHHHHHHHHHHHhccchhHHHHHHHHHHhccccccCCHHHHHHHhcCCCchhhhcchhHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999876444 558999999999998887 99999999877 458899999999999999999999999
Q ss_pred hhccccCCcccccccccccccchHHHHHHHHHhhccccccCCCCC-C-ccchhhhh------------hhhhhcc--chh
Q 011783 194 AQPAEKYPNLFSSESLFGKFPYFLPCLCISLFAFGETLHRHNDDD-D-SCDVSYDA------------LESASAE--VKE 257 (477)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~-~-~~~~~~~~------------~~~~~~~--~~~ 257 (477)
.+ .++|+++|...+...+..++.+...++..+..+.++ + +.|..... ....... ...
T Consensus 167 ~~-------~~gw~~~F~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 239 (489)
T PRK10207 167 AD-------KFGYSVTYNLCGAGLIIALLVYFACRGMVKDIGSEPDHKPMSFSKLLLVLLGSVVMIFVCAWLMHNVEVAN 239 (489)
T ss_pred HH-------hhChHHHHHHHHHHHHHHHHHHHHcchhhcccCCCCCccchhhhhHHHHHHHHHHHHHHHHHHHhhhhHHH
Confidence 88 446666662211112222222333333222211111 1 11110000 0000000 000
Q ss_pred --------------hcccCCchhhhhhcchhhHHHHHH--HHHHHhhhhhhHHHHHHhhcCcccCCccccchhhhHHHHH
Q 011783 258 --------------EEGREATPKKSLLKNWPLMSSIIV--YCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLA 321 (477)
Q Consensus 258 --------------~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~ 321 (477)
...+ ....+.+|+|.+....+. ..++..........++.|.++.......|+.. ..+.+.+
T Consensus 240 ~~~~~~~~i~~~~f~~~~--~~~~~~~r~r~~~~~~l~~~~~~f~~~~~q~~~~l~l~~~~~~~~~~~G~~i-~~~~~~~ 316 (489)
T PRK10207 240 LVLIVLSIVVTIIFFREA--FKLDKTGRNKMFVAFVLMLEAVVFYILYAQMPTSLNFFAINNVHHEILGFSI-NPVSFQA 316 (489)
T ss_pred HHHHHHHHHHHHHHHHHH--hcCCHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHhccccccceEE-CHHHHHh
Confidence 0000 001145566654443322 22233333333345555655321212123322 1234444
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcchh-------HHHHHHHHHHHHHHHHHHH----HHhhhhhHHHHHHHHHHHHhhhhHH
Q 011783 322 ITGFSLLVFQLSLYPFLERILGPIM-------VARIAGVLTIPLLTSYPYI----AMLSGFGLAFLLNCASVVKNLLSVS 390 (477)
Q Consensus 322 ~~~~~~~~~~~~~~~~l~~~~~~~~-------~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~ 390 (477)
.+.+..++.++ +.+++.||.++|+ .+..|.++.+++++.+... ...........+....++.+.+...
T Consensus 317 ~n~~~iii~~p-l~~~l~~rl~~r~~~~~~~~k~~~G~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~i~~~~l~g~Ge~~ 395 (489)
T PRK10207 317 LNPFWVVVASP-ILAGIYTHLGSKGKDLSMPMKFTLGMFLCSLGFLTAAAAGMWFADAQGLTSPWFIVLVYLFQSLGELF 395 (489)
T ss_pred HhHHHHHHHHH-HHHHHHHHHhhCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCccCHHHHHHHHHHHHHHHHH
Confidence 55566666666 5678999998776 3666777766665443211 1111111222344566667888999
Q ss_pred HHhHHHHHHhhcCCcchhhHHhHHHHHHHHHHHHHhhhHHHHHHHHhhhhccccCCCCchHHHHHHHHHHHHHHHHH
Q 011783 391 IITGLFILQNRAVDQDQRGAANGIAMTGMSLFKAAGPAGGGALFSWAQKRLDASFLPGSQMVFFVLNVVEAIGVLMT 467 (477)
Q Consensus 391 ~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 467 (477)
..+...+++.+..|++.+|.++|+.+....+|+.++..+++...............+.+...|...++..+++.++.
T Consensus 396 ~~~~g~~~~~~~aP~~~~g~~~g~~~l~~~ig~~lg~~l~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~v~~ 472 (489)
T PRK10207 396 ISALGLAMIAALVPQHLMGFILGMWFLTQAAAFLLGGYVATFTAVPDNITDPLETLPVYTNVFGKIGLVTLGVAVVM 472 (489)
T ss_pred HhHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccchhhhhhHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999988776542111000000000135566776666555544443
No 81
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=99.97 E-value=4.2e-27 Score=208.99 Aligned_cols=376 Identities=18% Similarity=0.186 Sum_probs=291.3
Q ss_pred chhHHHHHHHHHHHhhhchhchHhHHHHHHHHhcccccchhhhhhhHHHHHHHHHHHHHHhhhhhhhhhhcCCchhhHHH
Q 011783 39 PITELFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMG 118 (477)
Q Consensus 39 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~Grr~~~~~~ 118 (477)
.+..+..+....++..+......+.+|.+++.|+++..| .+++..+++.+|.+++++.|++.+|+|+|+-++.+
T Consensus 11 ~~~~~v~~t~lFfl~G~~~~l~diLip~l~~~f~ls~~~------a~liqfaff~gYf~~~lpa~~~~kk~gyk~gi~lg 84 (422)
T COG0738 11 VKLAFVLLTSLFFLWGFITCLNDILIPHLKEVFDLTYFE------ASLIQFAFFGGYFIMSLPAGLLIKKLGYKAGIVLG 84 (422)
T ss_pred ceeHHHHHHHHHHHHHHHhhcchhhHHHHHHHhCccHHH------HHHHHHHHHHHHHHHhccHHHHHHHhhhHHHHHHH
Confidence 345566777788888889999999999999999999999 99999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHH---hhhhHHHHHHHHHHhhhcccchhhH-HHHhhhhccccchhhHHHHHHHHhHHHHHHHHhHHHHhh
Q 011783 119 TASVVIFNTLFG---LSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLA 194 (477)
Q Consensus 119 ~~~~~i~~~~~~---~~~~~~~l~~~r~l~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~ 194 (477)
+.+++++..++. ...++..++++-++.|.|.+...++ +.+++...|+++-...+++.+..+++|..+||++++.+.
T Consensus 85 L~l~avg~~lF~pAa~~~~y~~FL~~lFila~Gi~~LetaaNp~v~~lg~~~~a~~rlnl~q~fn~lGa~~gp~~g~~li 164 (422)
T COG0738 85 LLLYAVGAALFWPAASSKSYGFFLVALFILASGIGLLETAANPYVTLLGKPESAAFRLNLAQAFNGLGAILGPLLGSSLI 164 (422)
T ss_pred HHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHhhhHHHHhccchHHHHhCCchhHHHHHHHHHHhhhhHHHHHHHHHHHHH
Confidence 999999999884 5568999999999999999998888 999999999999999999999999999999999999988
Q ss_pred hcc----------ccCCc--ccccccccccccchHHHHHHHHHhh--ccccccCCCCCCccchhhhhhhhhhccchhhcc
Q 011783 195 QPA----------EKYPN--LFSSESLFGKFPYFLPCLCISLFAF--GETLHRHNDDDDSCDVSYDALESASAEVKEEEG 260 (477)
Q Consensus 195 ~~~----------~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~l--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (477)
.+. ..|+. .-.+ +.++......+.++.+ .+++.++.++ ++.+. .+
T Consensus 165 ls~~~~~~~~~~~~~~~~~~~~~v-----~~pYl~~~~~lvll~v~~~~~k~p~~~~-~~~~~---------------~~ 223 (422)
T COG0738 165 LSGVALTMSAAQILAIKGADASSV-----QFPYLILAGLLVLLAVLILLSKLPDLQV-AAPSL---------------GA 223 (422)
T ss_pred HhhhhhccCHHHHHHHHHHHHHhh-----hhHHHHHHHHHHHHHHHHHhccCCcCCc-ccccc---------------cc
Confidence 731 11111 1112 3333433333322222 1222221111 11110 11
Q ss_pred cCCchhhhhhcchhhHHHHHHHHHHHhhhhhhHHHHHHhhcCcccCCccccchhhhHHHHHHHHHHHHHHHHHHHHHHHH
Q 011783 261 REATPKKSLLKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLER 340 (477)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~ 340 (477)
+......+++|+|+++...+..+++........++++.|+.+. .|.+..+.+...+....+.++|+. ++.++.+
T Consensus 224 ~~~~~~~~l~~~~~~~~gvl~~FlYVG~Eva~gsfl~~y~~~~-----~g~~~~~aa~~~s~~~~~~~vGRF-ig~~lm~ 297 (422)
T COG0738 224 SGSAGLSSLFQNKHLRLGVLAIFLYVGAEVAIGSFLVSYLEEL-----LGLNEQQAAYYLSFFWVGFMVGRF-IGSALMS 297 (422)
T ss_pred cccchHHHHHhChHHHHHHHHHHHHHhHHHHHHHHHHHHHHhc-----CCccHHHHHHHHHHHHHHHHHHHH-HHHHHHH
Confidence 1112678899999999999999999999999999999998875 788999999999999999999998 8888888
Q ss_pred hhcchhHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhhhhHHHHhHHHHHHhhcCCcchhhHHhHHHHHHHH
Q 011783 341 ILGPIMVARIAGVLTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIAMTGMS 420 (477)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~ 420 (477)
|++..+.+....++..+.++...+... .+......+.+++.+..+|...+...+..| ++.. ..|..-.+..
T Consensus 298 ~~~~~k~Laf~a~~~ill~~~~~l~~g-------~v~~~~l~~ig~F~simfPTIfslal~~l~-~~ts-~~s~~l~mai 368 (422)
T COG0738 298 RIKPEKYLAFYALIAILLLLAVALIGG-------VVALYALFLIGLFNSIMFPTIFSLALKNLG-EHTS-VGSGLLVMAI 368 (422)
T ss_pred HhCHHHHHHHHHHHHHHHHHHHHHhcC-------hHHHHHHHHHHHHhHHHHHHHHHHHHhccC-cccc-ccceeeeehe
Confidence 999999988877776666666655544 123333344577889999999999999998 4333 4444456678
Q ss_pred HHHHHhhhHHHHHHHHhhhhccccCCCCchHHHHHHHHHHHHHHHH
Q 011783 421 LFKAAGPAGGGALFSWAQKRLDASFLPGSQMVFFVLNVVEAIGVLM 466 (477)
Q Consensus 421 ~g~~~~~~~~g~l~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 466 (477)
+|+++-|.+.|++.|.. |....+.....+|.+..+.
T Consensus 369 vGGAiiP~l~G~i~d~~----------g~~~~~~~~pllc~lyV~~ 404 (422)
T COG0738 369 VGGAIIPPLQGVIADMF----------GIQLTFLIVPLLCYLYVLF 404 (422)
T ss_pred ecchHHHHHHHHHHHhh----------hhHHHHHHHHHHHHHHHHH
Confidence 89999999999999998 5555665555555555533
No 82
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.96 E-value=3.7e-29 Score=220.28 Aligned_cols=378 Identities=18% Similarity=0.177 Sum_probs=266.3
Q ss_pred HHHHHHHHHHhhhchhchHhHHHHHHHHhcc--------------------------------------------cccch
Q 011783 43 LFSIWIIVLCTALPISSLFPFLYFMIKDFQI--------------------------------------------AKREE 78 (477)
Q Consensus 43 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------------------------------------s~~~~ 78 (477)
+..+..+.+.+.+....+.|.+|.+..|.+. .....
T Consensus 23 lviv~ialllDnmL~~vivPiiP~~L~d~~~~p~~~~~~~~is~~~~~~~~~~~~~~~~~~~~~t~a~~~~~~~~~~~~~ 102 (464)
T KOG3764|consen 23 LVIVSIALLLDNMLYTVIVPIIPGYLYDIQAEPTIIQPFFPISTAPIPPGSMSSFSSLNISTESTNASAGKSPAEAISLD 102 (464)
T ss_pred EEEEehhhhccCccceeeeccCccHHHHhccCCccCccccccccCCCCCccccceecccCCccccccccccCchhccCcc
Confidence 4456677777777788888888877666652 00001
Q ss_pred hhhhhhHHHHHHHHHHHHHHhhhhhhhhhhcCCchhhHHHHHHHHHHHHHHHhhhhHHHHHHHHHHhhhcccchhhH-HH
Q 011783 79 DIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGPI-KA 157 (477)
Q Consensus 79 ~~~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~-~~ 157 (477)
.....+|++.+++.+...+.+++.|.+.||+|+|..+++|+.++..+++++++.++++.++++|.+||+|.+...++ .+
T Consensus 103 ~e~~~iG~LFaskA~~qllvnp~~G~l~~~iGy~ipm~~Gl~vmf~sTilFafg~sy~~l~vAR~LQgvgsA~~~tsgla 182 (464)
T KOG3764|consen 103 RENTQIGLLFASKALVQLLVNPFFGNLIDRIGYKIPMVAGLFVMFLSTILFAFGNSYPMLFVARSLQGVGSAFADTSGLA 182 (464)
T ss_pred ccccchhHHHHHHHHHHHHhcccchhhHHHhccccHHHHHHHHHHHHHHHHHHcchhHHHHHHHHHhhhhHHHHHhhhHH
Confidence 11223999999999999999999999999999999999999999999999999999999999999999999999988 99
Q ss_pred Hhhhhcccc-chhhHHHHHHHHhHHHHHHHHhHHHHhhhccccCCcccccccccccccchHHHHHHHHHhhccccccCCC
Q 011783 158 YACEIFREE-HQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSESLFGKFPYFLPCLCISLFAFGETLHRHND 236 (477)
Q Consensus 158 ~i~~~~~~~-~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 236 (477)
+++|.+|++ +|++++|+.-.+.++|..+||+.||.+++ ..|-+..|....++...-....+++.|..+.+++
T Consensus 183 mlAd~f~~d~er~~vmGialgfislG~lvgPpfGGilYe-------~~Gk~aPFlVL~~v~Lld~~L~l~vi~p~~~~~~ 255 (464)
T KOG3764|consen 183 MLADVFPEDNERGSVMGIALGFISLGVLVGPPFGGILYE-------FAGKSAPFLVLAIVLLLDGALQLLVIEPTEMDPD 255 (464)
T ss_pred HHHHHcccchhhhHHHHHHHHHHhccceecCCcccchHh-------hcCCcCcHHHHHHHHHHHHHHHHheeCccccCcc
Confidence 999999965 58999999999999999999999999999 6676666621111111111122222222111110
Q ss_pred CCCccchhhhhhhhhhccchhhcccCCchhhhhhcchhhHHHHHHHHHHHhhhhhhHHHHHHhhcCcccCCccccchh-h
Q 011783 237 DDDSCDVSYDALESASAEVKEEEGREATPKKSLLKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQ-M 315 (477)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~-~ 315 (477)
..++..+.++++++|.++.........+.........+++|..+. +. ++. +
T Consensus 256 ----------------------~~~~~~~~~~Ll~dP~I~~~agai~~~n~~lafLePtlslwm~e~-----m~-~p~w~ 307 (464)
T KOG3764|consen 256 ----------------------STEQGTPMWSLLMDPYILLIAGAITFSNSSLAFLEPTLSLWMLET-----MF-TPGWE 307 (464)
T ss_pred ----------------------ccccCccHHHHHhCchHhhhhcchhhccchHHHhCcccHHHHHHh-----cc-CCCcc
Confidence 111224678899999988766655555555555556666766654 45 344 7
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhhc--chhHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhhhhHHHHh
Q 011783 316 VGEVLAITGFSLLVFQLSLYPFLERILG--PIMVARIAGVLTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNLLSVSIIT 393 (477)
Q Consensus 316 ~g~~~~~~~~~~~~~~~~~~~~l~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 393 (477)
.|..+....+...++.. +.+.+.||++ |......+.+..+..+...++...... .|+......+.++.......|
T Consensus 308 ~G~~fLp~~~~y~ig~~-lfg~la~k~~~~~wl~~~~gl~~~G~~~~~iP~~~~~~~--L~vp~~~l~~~i~~~dasl~P 384 (464)
T KOG3764|consen 308 VGLAFLPASLSYAIGTN-LFGKLADKYPHLRWLLSLGGLATVGVSSGPIPFATSIAQ--LWVPNFGLGFGIGLADASLIP 384 (464)
T ss_pred eeeeecccccchhccCc-hHHHHHHhcCchhHHHHHHHHHHHHHHhchhHhhhhHHH--HhhhhHHHHHHHHHHHHHHhh
Confidence 88888888999999988 8899999999 544444555555555555555544222 232333333322333333334
Q ss_pred HHHHHHhhcCCcc---hhhHHhHHHHHHHHHHHHHhhhHHHHHHHHhhhhccccCCCCchHHHHHHHHHHHHHHHHHhh
Q 011783 394 GLFILQNRAVDQD---QRGAANGIAMTGMSLFKAAGPAGGGALFSWAQKRLDASFLPGSQMVFFVLNVVEAIGVLMTFK 469 (477)
Q Consensus 394 ~~~~~~~~~~~~~---~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 469 (477)
.....+.. ...+ .-|.++++......+|.++||.++|.+.+.. |+++...+.++..++-.-+...
T Consensus 385 ~l~~lvd~-rh~s~~~vYGsVyaIad~a~sla~a~GP~~gg~iv~~i----------GF~wl~~iig~~n~iyapvl~l 452 (464)
T KOG3764|consen 385 TLGYLVDP-RHVSGFNVYGSVYAIADAAFSLAYAIGPTFGGSLVEAI----------GFEWLMTIIGILNLIYAPVLLL 452 (464)
T ss_pred hhHHhcch-hhccccceeeeHHHHHHHHHHHhhhccccccchheeeh----------hHHHHHHHHHHHHHHHHHHHHH
Confidence 33332222 2222 5689999999999999999999999999988 8888888888877776554433
No 83
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only]
Probab=99.96 E-value=3.7e-27 Score=231.49 Aligned_cols=399 Identities=12% Similarity=0.066 Sum_probs=257.2
Q ss_pred hhchHhHHHHHHHHhcccccchhhh-hhhHHHHHHHHHHHHHHhhhhhhhhhhcCCchhhHHHHHHHHHHHHHHHhhhhH
Q 011783 57 ISSLFPFLYFMIKDFQIAKREEDIG-SYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLSVNF 135 (477)
Q Consensus 57 ~~~~~~~~~~~~~~~~~s~~~~~~~-~~~g~~~s~~~~~~~~~~~~~G~l~Dr~Grr~~~~~~~~~~~i~~~~~~~~~~~ 135 (477)
.+...+....+.++...+..+.... ...+++.++..++..+++++.|+++|++|||+.++.+.+.+.++.+++++++|+
T Consensus 63 ~g~~s~~~~~~~~~~~~~~~~~~~~~~~~s~~~s~~~lga~~g~l~~g~l~d~~GRk~~l~~~~~~~~iG~ii~~~a~~~ 142 (513)
T KOG0254|consen 63 IGGISGALDFLQRFASLYDLSTGEYSVRQGLLTSILNLGALVGSLLAGRLGDRIGRKKTLLLAVVLFLIGAIIIALAPSW 142 (513)
T ss_pred cccchhhHHHHHhcccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhhhH
Confidence 4566666666666543222210000 115899999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhhcccchhhH-HHHhhhhccccchhhHHHHHHHHhHHHHHHHHhHHHHhhhccccCCccccccccccccc
Q 011783 136 WMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSESLFGKFP 214 (477)
Q Consensus 136 ~~l~~~r~l~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 214 (477)
++++++|+++|+|.|..... +.+++|..|++.||...+..+....+|..++..++....+...+||..++. ..
T Consensus 143 ~~l~~GR~l~G~g~G~~~~~~piy~sEiap~~~RG~l~~~~~l~~~~Gi~~~~~~~~~~~~~~~~Wr~~~~~------~~ 216 (513)
T KOG0254|consen 143 YQLIVGRILTGLGVGGASVLAPVYISEIAPAHIRGTLVSLYQLFITIGILLGYCINYGTSKVYAGWRIPLGL------AL 216 (513)
T ss_pred HHHHHHHHHhccchhhhhhcchhhHhhcCChhhhHHHHHHHHHHHHHHHHHHHHHhhhhccCCccHHHHHHH------HH
Confidence 99999999999998887776 999999999999999999999999999999966665554421244433332 22
Q ss_pred chHHHHHHHHHhhccccccCCCCCCc--cchhhhhhhh--hhccch-----------hhc-ccCCchhhhhhcchhhHHH
Q 011783 215 YFLPCLCISLFAFGETLHRHNDDDDS--CDVSYDALES--ASAEVK-----------EEE-GREATPKKSLLKNWPLMSS 278 (477)
Q Consensus 215 ~~~~~~~~~~~~l~~~~~~~~~~~~~--~~~~~~~~~~--~~~~~~-----------~~~-~~~~~~~~~~~~~~~~~~~ 278 (477)
...+...+..+++||+|++..++.+. .+.....+.. +++... +.. .+.+..++++++.......
T Consensus 217 i~~~~~~~~~~~~pesp~~L~~~g~~~~a~~~l~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 296 (513)
T KOG0254|consen 217 IPAVILALGMLFLPESPRWLIEKGRLEEAKRSLKRLRGLSPEDVEVELELLKIKLLVEAEVAEGKASWGELFSPKVRKRL 296 (513)
T ss_pred HHHHHHHHHHHhCCCChHHHHHcCChHHHHHHHHHHhCCCCcchHHHHHHHHHHHHHhhhcccccccHHHhcCcchHHHH
Confidence 22333344477889999875442222 1111111111 000000 000 1111124444442223333
Q ss_pred HHHHHHHHhhhhhhHHHHHHhhcCcccCCccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHH
Q 011783 279 IIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTIPL 358 (477)
Q Consensus 279 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 358 (477)
.+...+..+.+.........|..+. .+..|.+... .......++..+++.. ++..+.||.|||+.+..+...+.++
T Consensus 297 ~i~~~l~~fqq~tG~~~~~~Y~~~i--f~~~g~~~~~-~~~~~~~~~v~~~~t~-~~~~lvd~~gRr~lll~s~~~m~~~ 372 (513)
T KOG0254|consen 297 IIGLLLQLFQQLTGINYVFYYSTTI--FKSAGLKSDT-FLASIILGVVNFLGTL-VATYLVDRFGRRKLLLFGAAGMSIC 372 (513)
T ss_pred HHHHHHHHHHHHhCCceEEeehHHH--HHhcCCCCch-HHHHHHHHHHHHHHHH-HHHHHHHHhccHHHHHHhHHHHHHH
Confidence 3334443333333322222233222 2334554332 3344444555556655 6689999999999999999999888
Q ss_pred HHHHHHHHHhhh-------hhHHHHHHHHHHHHhhhhHHHHhHHHHHHhhcCCcchhhHHhHHHHHHHHHHHHHhhhHHH
Q 011783 359 LTSYPYIAMLSG-------FGLAFLLNCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIAMTGMSLFKAAGPAGGG 431 (477)
Q Consensus 359 ~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g 431 (477)
.+++........ ...+..+....+....+..+..+..+.+.+|.+|.+.|+++.++....+.+...+-.....
T Consensus 373 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~f~~g~g~v~w~~~sEifp~~~r~~~~s~~~~~n~~~~~~v~~~~~ 452 (513)
T KOG0254|consen 373 LVILAVVGVFALYYPNSSKGAGWLAIVFLCLFIFSFAIGWGPVPWVIVSEIFPLRLRSKGASLAVAVNWLWNFLISFFFP 452 (513)
T ss_pred HHHHHHHHHHhccCCCcccchhHHHHHHHHHHHHHHhcccccchhhhhhccCcHhHHhhhHHHHHHHHHHHHHHHHHHHH
Confidence 877665544321 2234445555555566777778888889999999999999999999999888877766555
Q ss_pred HHHHHhhhhccccCCCCchHHHHHHHHHHHHHHH-HHhhhhhhccC
Q 011783 432 ALFSWAQKRLDASFLPGSQMVFFVLNVVEAIGVL-MTFKPFLAQRH 476 (477)
Q Consensus 432 ~l~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 476 (477)
.+.+.. +....|...+.++.+... ..+. ..||++
T Consensus 453 ~~~~~~----------~~~~~f~~f~~~~~~~~~~fv~~-~~pETk 487 (513)
T KOG0254|consen 453 FITEAL----------GIGGTFGYFGGICLLSLIIFVFF-FVPETK 487 (513)
T ss_pred HHHHhc----------cccchHHHHHHHHHHHHHHHheE-EcccCC
Confidence 555443 223455555555555555 3333 578776
No 84
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=99.96 E-value=4.7e-26 Score=217.06 Aligned_cols=374 Identities=12% Similarity=0.016 Sum_probs=251.0
Q ss_pred HHHHHHHHHHhhhchhchHhHHHHHHHHhcccccchhhhhhhHHH--HHHHHHHHHHHhhhhhh-hhhhcCCchhhHHHH
Q 011783 43 LFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYV--GSSFMFGRALTSVFWGL-VADRYGRKPVIIMGT 119 (477)
Q Consensus 43 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~g~~--~s~~~~~~~~~~~~~G~-l~Dr~Grr~~~~~~~ 119 (477)
+..+...++.+++..+...|.+|.+.+|.|.+.++ +|++ .+...+...+.+|+++. ..||+||||..++..
T Consensus 3 ~~~~~~ly~~~g~~~~~~~p~lp~~l~~~g~~~~~------iGl~~~~~l~~~~~~l~~p~~~~~~~~~~g~r~~~i~~~ 76 (390)
T TIGR02718 3 VITLGLLYLSQGIPIGLAMDALPTLLREDGAPLTA------LAFLPLVGLPWVVKFLWAPLVDNWWSWRLGRRRSWVLPM 76 (390)
T ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCHHH------HHHHHHHHHHHHHHHHHHHHHhccccccCCcchhHHHHH
Confidence 45667778889999999999999999999999999 9997 46668888888888844 799999999976665
Q ss_pred HHH-HHHHHHHH---hhhh-HHHHHHHHHHhhhcccchhhH-HHHhhhhccccchhhHHHHHHHHhHHHHHHHHhHHHHh
Q 011783 120 ASV-VIFNTLFG---LSVN-FWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFL 193 (477)
Q Consensus 120 ~~~-~i~~~~~~---~~~~-~~~l~~~r~l~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l 193 (477)
.+. ++.....+ ...+ ..+++..-++.++..+...+. .++..|..++++++...+....+..+|.++|+...+++
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~d~~~d~~~~~~~~~~~~~~~~~~~~~g~~lG~~~g~~~~~~l 156 (390)
T TIGR02718 77 QCLVSACLASLALVGPDVAGAGWAVGLLACASLASATQDIATDGMAAEHFNGRTLAKGNAVQIAGVMIGFFGGGAGTLVL 156 (390)
T ss_pred HHHHHHHHHHHHcCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhhhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 332 22222222 2222 334444555555666666666 78888888888888888888888899999999888888
Q ss_pred hhccccCCcccccccccccccchHHHHHHHHHhhccccccCCCCCCccchhhhhhhhhhccchhhcccCCchhhhhhcch
Q 011783 194 AQPAEKYPNLFSSESLFGKFPYFLPCLCISLFAFGETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKSLLKNW 273 (477)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 273 (477)
.+ .++|+..|...........+..+.++|.++. + ++.+ ++...+.++.+|+|
T Consensus 157 ~~-------~~gw~~~f~~~a~l~~~~~~~~~~~~~~~~~---~-~~~~-----------------~~~~~~~~~~l~~~ 208 (390)
T TIGR02718 157 FG-------KFGQRPAFLLVACVPLASLVCVLWLKDRAVA---S-PEAP-----------------LARRASLFRFFRRP 208 (390)
T ss_pred HH-------HhCHHHHHHHHHHHHHHHHHHHHHcCCCCcC---c-cccc-----------------hhhHHHHHHHHcCc
Confidence 87 5666666521111111112222233322111 0 0000 00112466788999
Q ss_pred hhHHHHHHHHHHHhhhhhhHHHHHHhhcCcccCCccccchhhhHHHHHHHHHHHH-HHHHHHHHHHHHhhcchhHHHHHH
Q 011783 274 PLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLL-VFQLSLYPFLERILGPIMVARIAG 352 (477)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~-~~~~~~~~~l~~~~~~~~~~~~~~ 352 (477)
.++......++..........+.+.|+.+ .|+++++.|......+.... ++.. +.+++.||+++++.+..+.
T Consensus 209 ~~~~~~~~~~l~~~~~~~~~~~~~~~l~~------~G~s~~~ig~~~~~~~~~~~~~g~~-~~g~l~~r~g~~~~l~~~~ 281 (390)
T TIGR02718 209 LAWSLLALALLSAMTAVSGFGLSKLYLVD------AGWPLEWIGRLGMAGGAVTVLLGCG-GGAWLVRRAGLWRTFILGV 281 (390)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHhhHHHHh------cCCCHHHHHHHHhHHHHHHHHHHHH-HHHHHHHHhhHHHHHHHHH
Confidence 88887777777766666666677666654 69999999999888776444 4455 8999999999999888776
Q ss_pred HHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhhhhHHHHhHHHHHHhhcCCc-chhhHHhHHHHHHHHHHHHHhhhHHH
Q 011783 353 VLTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVDQ-DQRGAANGIAMTGMSLFKAAGPAGGG 431 (477)
Q Consensus 353 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~~g~~~~~~~~g 431 (477)
.+..+.........................+.++..+...+...+...+..++ +.+++.+++.+...++|..++|.++|
T Consensus 282 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~lg~~~g~~~~G 361 (390)
T TIGR02718 282 GLAGSLALLWFAQAAFWLAPGIAVAWSCSAFGSLITGITSVAIYTAFMRFAGDGDQAGTDVTAVQSTRDLGELIASSIAG 361 (390)
T ss_pred HHHHHHHHHHHHHHHcccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcccchHHHHHHHHHHHHHHHHHHHHHHH
Confidence 65533322222111110000111112222222344455556666666666665 88999999999999999999999999
Q ss_pred HHHHHhhhhccccCCCCchHHHHHHHHHHHHHHHHH
Q 011783 432 ALFSWAQKRLDASFLPGSQMVFFVLNVVEAIGVLMT 467 (477)
Q Consensus 432 ~l~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 467 (477)
.++|+. |++..|...+++.+++.+..
T Consensus 362 ~l~~~~----------G~~~~f~~~~~~~l~a~~~~ 387 (390)
T TIGR02718 362 YLTDRF----------GYAGGFLSGTVLAVLAILLA 387 (390)
T ss_pred HHHHHH----------ccHHHHHHHHHHHHHHHHHh
Confidence 999988 88889988888777765543
No 85
>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only]
Probab=99.96 E-value=1.4e-27 Score=207.70 Aligned_cols=398 Identities=14% Similarity=0.077 Sum_probs=267.6
Q ss_pred CchhHHHHHHHHHHHhhhchhchHhHHHHHHHHhcccccchhhhhhhHHHHHHHHHHHHHHhhhhhhhhhhcCCchhhHH
Q 011783 38 LPITELFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIM 117 (477)
Q Consensus 38 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~Grr~~~~~ 117 (477)
.++............+.+-.-..+-+.|...+.+|.+..+ ..++......+..+++..||.++|++|||+.+..
T Consensus 75 fq~yl~~~ag~gwmad~m~~m~~s~i~~~l~~~w~~s~~q------~~llt~~v~~gmllga~~w~l~~d~~grr~~f~~ 148 (528)
T KOG0253|consen 75 FQWYLFFVAGMGWMADAMEMMLLSLILPALDEVWGPSEGQ------APLLTLSVFLGMLVGAMVWGLSADTIGRRKGFNL 148 (528)
T ss_pred chhhHHHHhhhHHHHHHHHHHHHHHHHHHHHhhhchhhhh------hhHHHHHHHhhhhhhhhhhheehhhhhcchhhhh
Confidence 3444444555555555555555566677888899988888 9999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhhhhHHHHHHHHHHhhhcccchhhH-HHHhhhhccccchhhHHHHHHHHhHHHHHHHHhHHHHhhhc
Q 011783 118 GTASVVIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQP 196 (477)
Q Consensus 118 ~~~~~~i~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~ 196 (477)
..+..++...+.+.++|+..+.+.|.+.|+|.|. .|. .++-.|..|..+|...+-.. ..+.+|.++...+.-.+..
T Consensus 149 T~l~t~v~~~is~~spnf~~L~~f~~l~~~g~gg-~pv~~~~yle~lp~~~r~~~~V~~-~~waig~v~ea~law~vm~- 225 (528)
T KOG0253|consen 149 TFLVTGVFGVISGASPNFASLCVFRALWGFGVGG-LPVDSAIYLEFLPSSHRWLLTVMS-FFWAIGQVFEALLAWGVMS- 225 (528)
T ss_pred hHHHHHHHHHhhcCCCCeehhhHHHHHHhccCCC-ccHhHHHHHHhccCcCCCcchhHH-HHHHHHHHHHHHHHHHHHH-
Confidence 9999999999999999999999999999999888 666 88899999999999887777 8999999999999988777
Q ss_pred cccCCcccccccccccccchHHHHHHHHHhhccccccCCCCCCccchhh--hhhh---------------------hhhc
Q 011783 197 AEKYPNLFSSESLFGKFPYFLPCLCISLFAFGETLHRHNDDDDSCDVSY--DALE---------------------SASA 253 (477)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~--~~~~---------------------~~~~ 253 (477)
.+|||+.+......+..+....+++||+++..-.+.++.+... +++. ++..
T Consensus 226 ------~~gwr~~l~~~~~pl~~~a~f~~w~~ESpRf~~~~G~~~kAletL~kiArmNg~qlplgvl~~s~~~~~e~e~~ 299 (528)
T KOG0253|consen 226 ------NFGWRYLLFTSSTPLMFAARFLVWVYESPRFYLAKGDDYKALETLHKIARMNGKQLPLGVLESSAIDRQEQEES 299 (528)
T ss_pred ------hhhHHHHHHHHHhHHHHHHHHHhhcccCcchhhhcCChHHHHHHHHHHHHhcCCCCCcceeeeehhhhhhhhhh
Confidence 4566665522222344455666789999987544333222211 1110 0000
Q ss_pred cchh----hcccCCchhhhhhcchhhHHHHHHHHHHHhhhhhhHHHHHHhhcCcccCCcccc-----------------c
Q 011783 254 EVKE----EEGREATPKKSLLKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNY-----------------S 312 (477)
Q Consensus 254 ~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~-----------------~ 312 (477)
+.++ ..++...+..+++..+..+..++.++.++...+.++...-.-....+.....+. +
T Consensus 300 ~~~~~~~~a~ke~rg~~~nLlsp~lrkttlllw~iwfgnafsyyg~VLlttelfqsgd~c~~~~r~~p~e~e~~~~c~~s 379 (528)
T KOG0253|consen 300 DLDDSKSSAAKEVRGGTTNLLSPKLRKTTLLLWRIWFGNAFSYYGSVLLTTELFQSGDACPLYNRFLPTELETRANCPLS 379 (528)
T ss_pred chhhhhhccccccccchHhhcChHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhccCccccchhcchhHHHhhhcCCcc
Confidence 0000 112233445556654444445555555544444443322211111000010111 1
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhhhhHHHH
Q 011783 313 TQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNLLSVSII 392 (477)
Q Consensus 313 ~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 392 (477)
..+--.-..+..+....|.+ +.+++.||+|||+.+...+++.+++.+.+....... ...+..+..-++..+.+
T Consensus 380 ~~~dYrdllitslaefPGlL-It~~iverlGRKkTMal~l~~f~iflfll~~c~~rn------~~tvllf~arafisg~f 452 (528)
T KOG0253|consen 380 VAKDYRDLLITSLAEFPGLL-ITGVIVERLGRKKTMALSLILFGIFLFLLTTCKTRN------AYTVLLFTARAFISGAF 452 (528)
T ss_pred chhHHHHHHHHHHhhCCchh-HHHHHHHHhcchhHHHHHHHHHHHHHHHHHHhcCcc------hhHHHHHHHHHHHhchh
Confidence 11111123344566666766 899999999999999999998888877665544322 12222233345667778
Q ss_pred hHHHHHHhhcCCcchhhHHhHHHHHHHHHHHHHhhhHHHHHHHHhhhhccccCCCCchHHHHHHHHHHHHHHHHHhh
Q 011783 393 TGLFILQNRAVDQDQRGAANGIAMTGMSLFKAAGPAGGGALFSWAQKRLDASFLPGSQMVFFVLNVVEAIGVLMTFK 469 (477)
Q Consensus 393 ~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 469 (477)
...|.|..|++|...|+++.|..+.+..+|+++.|.++ ...+. ....+..+.+.+++++.++..+
T Consensus 453 qvaYvYtPEVyPTavRatgvGtcSsmaRIggI~~p~iA-~~~e~-----------s~sl~i~vy~~~~ilagIavcf 517 (528)
T KOG0253|consen 453 QVAYVYTPEVYPTAVRATGVGTCSSMARIGGIFSPVIA-MRAEL-----------STSLPIFVYGALFILAGIAVCF 517 (528)
T ss_pred eEEEEecCcccchhhhhcchhhhhhHHhhhhhhhhHHH-HHhcc-----------ceeehHHHHHHHHHHHHHHhee
Confidence 88899999999999999999999999999999999988 22222 2234555666666666665544
No 86
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.96 E-value=1.7e-27 Score=226.00 Aligned_cols=284 Identities=17% Similarity=0.114 Sum_probs=218.7
Q ss_pred HHHHHHHHhhhchhchH-hHHHHHHHHhcccccchhhhhhhHHHHHHHHHHHHHHhhhhhhhhhhcCCchhhHHHHHHHH
Q 011783 45 SIWIIVLCTALPISSLF-PFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVV 123 (477)
Q Consensus 45 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~s~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~Grr~~~~~~~~~~~ 123 (477)
.++...+..+.+...++ +.+-.+.+|.+....+ .+.+.+++.++++++++++|.+.||++-.+.+....++++
T Consensus 49 ~~~~~y~~~~~d~~si~~a~l~g~~edl~~~~~~------l~~~~t~F~v~Yii~~~p~~~L~~r~~ls~~l~~~~~~w~ 122 (495)
T KOG2533|consen 49 FLCYLYFHAYLDKSSIVNASLSGLKEDLKLVGNQ------LGVLDTVFYVGYIIGQFPSGLLGDRFPLSKGLSVSGILWG 122 (495)
T ss_pred HHHHHHHHHhcchhcchhHHHcCCccccchhhhh------hhhHHHHHHHHHHHHHhhHHHHHHhCChHHHHHHHHHHHH
Confidence 34445555555554433 3344566899999999 9999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhhhHHHHHHHHHHhhhcccchhhH-HHHhhhhccccchhhHHHHHHHHhHHHHHHHHhHHHHhhhccccCCc
Q 011783 124 IFNTLFGLSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPN 202 (477)
Q Consensus 124 i~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~ 202 (477)
+..++.....|++.+++.|++.|+.++...|. ..+++.|+.++||++.++++.+..++|.++|.+++..+.+ ..+-..
T Consensus 123 ~~~~~~~~~~s~~~~ialr~llGl~es~~wP~~~~~lg~wy~~~e~g~r~~~~~a~~~~g~i~ggliA~g~~~-~~~~~~ 201 (495)
T KOG2533|consen 123 LFGFLTAAVHSFPGLIALRFLLGLFESGGWPGVVAILGNWYGKSERGLRMGIWYASASLGNIFGGLIAYGVFK-LNGSGG 201 (495)
T ss_pred HHHHHHHHHhhhHHHHHHHHHHHHHhcccchHHHHHHHhhcChhhhhhhHHHHHHhcchhhHHHHHHHHHhhh-hcCCCC
Confidence 99988888999999999999999999999998 9999999999999999999999999999999999988765 222223
Q ss_pred cccccccccccc-chHHHHHHHHHhhccccccCCCCCCccch-hhhhhhhhhccchhhcccCCchhhhhhcchhhHHHHH
Q 011783 203 LFSSESLFGKFP-YFLPCLCISLFAFGETLHRHNDDDDSCDV-SYDALESASAEVKEEEGREATPKKSLLKNWPLMSSII 280 (477)
Q Consensus 203 ~~~~~~~~~~~~-~~~~~~~~~~~~l~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (477)
..+||+.|.... ..++..++..+++|+.|...+-.+++++. ..++.++......+++ .....+++.+++|.+|...+
T Consensus 202 ~~gW~~~FiI~G~i~~~~gi~~f~~lp~~P~~~~fl~~~ek~~~~~~~~~~~~~~~~~~-~~~~~~~~a~~dp~vw~~~l 280 (495)
T KOG2533|consen 202 LAGWRWLFIIEGVITLVLGIVVFFFLPDNPSKAWFLTDEEKELVVERLRESPSGGIENK-FKWKGFKEALKDPGVWPFSL 280 (495)
T ss_pred cCCceeehhHHHHHHHHHHheEEEEecCChhhccccchHHHHHHHHHHHhccCCCcccc-cCHHHHHHHHhchhHHHHHH
Confidence 566666663111 12333444556777776643222211111 1111111111111111 45567889999999999999
Q ss_pred HHHHHHhhhhhhHHHHHHhhcCcccCCccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 011783 281 VYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERIL 342 (477)
Q Consensus 281 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~ 342 (477)
..++......++..+.|+|+.+. .|++..++..+..+..++++++.+ +.+.++||.
T Consensus 281 ~~~~~~lv~~~~~~~lpl~l~~~-----~~~s~~~a~~ls~~~~~~g~v~~i-~ag~lsdr~ 336 (495)
T KOG2533|consen 281 CYFFLKLVNYGFSYWLPLYLKSN-----GGYSELQANLLSTPYDVGGIVGLI-LAGYLSDRL 336 (495)
T ss_pred HHHHHhhccccHHHHHHHHHHcC-----CCcChHHhccccchHHhhhHHHHH-HHHHHHHHH
Confidence 99999999999999999998862 679999999999999999999988 999999994
No 87
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=99.96 E-value=5.3e-28 Score=240.45 Aligned_cols=382 Identities=16% Similarity=0.123 Sum_probs=267.3
Q ss_pred HHHHHHHHHhhhchhchHhHHHHHHHHhcccccchhhhhhhHHHHHHHHHHHHHHhhhhhhhhhhcCCchhhHHHHHHHH
Q 011783 44 FSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVV 123 (477)
Q Consensus 44 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~Grr~~~~~~~~~~~ 123 (477)
....+..+...+..+...+.++.+.++|+++..+ .|++.+.+.++++++.++.|+++||+|||+.+.++.++++
T Consensus 36 ~~~~~~~~~~~~~~g~~~~~l~~iek~F~lss~~------~G~i~s~~~i~~~~~~i~v~~~~~r~~r~~~i~~g~ll~~ 109 (633)
T TIGR00805 36 LLLTCAQLQGLLYNGLVNSSLTTIERRFKLSTSS------SGLINGSYEIGNLLLIIFVSYFGTKLHRPIVIGIGCAIMG 109 (633)
T ss_pred HHHHHHHHHHHHHHHHHHhhchhhhhhhCCCCCc------ceeeeehhhHHHHHHHHHHHHhhcccCcceEEEecHHHHH
Confidence 3444466667777788889999999999999999 9999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhh---------------------------------------------------hHHHHHHHHHHhhhcccch
Q 011783 124 IFNTLFGLSV---------------------------------------------------NFWMAVLTRFLLGSLNGLL 152 (477)
Q Consensus 124 i~~~~~~~~~---------------------------------------------------~~~~l~~~r~l~G~~~g~~ 152 (477)
++++++++.+ .+..++++|+++|+|.+..
T Consensus 110 lg~ll~alphf~~~~y~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~GiG~~~~ 189 (633)
T TIGR00805 110 LGSFLLSLPHFLSGRYSYSTTVSSTGNLSSANSFLCMENLTQALRPTQCPSECQKQHKESLMWLLFLVSQLLRGIGATPI 189 (633)
T ss_pred HHHHHHhChHHhcCCccccccccccccccccccccccCCCCCCccccccccccccccCCCceehhhHHHHHHHhccCCcc
Confidence 9999998763 2567789999999999998
Q ss_pred hhH-HHHhhhhccccchhhHHHHHHHHhHHHHHHHHhHHHHhhhccccC---------------Ccccccccccccccch
Q 011783 153 GPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKY---------------PNLFSSESLFGKFPYF 216 (477)
Q Consensus 153 ~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~---------------~~~~~~~~~~~~~~~~ 216 (477)
.+. .+++.|++|+++|++.+++++.+..+|.++|+++++++.+...+| ||.-.|+..|......
T Consensus 190 ~~~~~~~i~d~~~~~~~~~~~~i~~~~~~iG~~lG~llgg~l~~~~~d~~~~~~~~~~l~~~dprWiGaWwl~Fli~g~l 269 (633)
T TIGR00805 190 FPLGISYIDDFAKSKNSPLYIGILESIAVFGPAFGYLLGSFCLQIYVDTGSVNTEDVILTPTDPRWIGAWWIGFLICGGV 269 (633)
T ss_pred hhcCchhhhccCCccccHHHHHHHHHHHHhhhHHHHHHHHHHHhcccccccCCCCCCCCCCCCccHHHHHHHHHHHHHHH
Confidence 888 999999999999999999999999999999999999988643333 4433455544211111
Q ss_pred HHHHHHHHHhhccccccCCCCCCccchhhhhhhhhhccc-h---hhcccCCchhhhhhcchhhHHHHHHHHHHHhhhhhh
Q 011783 217 LPCLCISLFAFGETLHRHNDDDDSCDVSYDALESASAEV-K---EEEGREATPKKSLLKNWPLMSSIIVYCVFSLHDMAY 292 (477)
Q Consensus 217 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (477)
..+..+.++.+|+..+....+.+......+..+....+. . +...+.....+.+++||.++...+..++.......+
T Consensus 270 ~~l~~v~l~~~p~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~n~~f~~~~l~~~~~~~~~~~~ 349 (633)
T TIGR00805 270 ALLTSIPFFFFPKALPKEGKRVNVDVHETEKLEKSEDKSRKKNSDITKDFPKIIKRLLCNPIYMLVILAQVIDSLAFNGY 349 (633)
T ss_pred HHHHHHHHHhCccccCCcccccchhhhhhhcccccccccchhhhhhHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHH
Confidence 222223344555543321110000000000000000000 0 001112345678999999999999988888888889
Q ss_pred HHHHHHhhcCcccCCccccchhhhHHHHHHHHH-HHHHHHHHHHHHHHHhhc--chhHHHHHHHHHHHHHHHHHH---H-
Q 011783 293 SEIFSLWANSPKKLGGLNYSTQMVGEVLAITGF-SLLVFQLSLYPFLERILG--PIMVARIAGVLTIPLLTSYPY---I- 365 (477)
Q Consensus 293 ~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~-~~~~~~~~~~~~l~~~~~--~~~~~~~~~~~~~~~~~~~~~---~- 365 (477)
..+.|.|++.. +|+++.+++++.....+ +.+++.+ +++++.||++ .++.+..+..+..+..+.... .
T Consensus 350 ~~~lP~yl~~~-----~g~s~~~ag~l~~~~~i~~~~vG~~-l~G~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 423 (633)
T TIGR00805 350 ITFLPKYLENQ-----YGISSAEANFLIGVVNLPAAGLGYL-IGGFIMKKFKLNVKKAAYFAICLSTLSYLLCSPLFLIG 423 (633)
T ss_pred HHHHHHHHHHH-----cCCcHHHHHHHhhhhhhhHHHHHHh-hhhheeeeecccHHHHHHHHHHHHHHHHHHHHHHHeec
Confidence 99999998765 89999999999888776 4456666 8999999988 456666666655555433210 0
Q ss_pred ----------------------HH---------hh---------------------------------------------
Q 011783 366 ----------------------AM---------LS--------------------------------------------- 369 (477)
Q Consensus 366 ----------------------~~---------~~--------------------------------------------- 369 (477)
.. ..
T Consensus 424 C~~~~~agv~~~y~~~~~~~~~~~~Cn~~C~C~~~~~~PVCg~~~~tY~SpC~AGC~~~~~~~~~~~y~~CsCi~~~~~~ 503 (633)
T TIGR00805 424 CESAPVAGVNNPSTDQSIYVENPTDCNRQCSCDSSFFDPVCGDNGLAYLSPCHAGCSMSVGTGSNMVYTNCSCVQTPGNS 503 (633)
T ss_pred CCCCccceeeccCCCcccCCCChhccCCCCCCCCCCcccccCCCCCEEECccccCCCCccCCCCcceecccccccCCCCC
Confidence 00 00
Q ss_pred ----hh------hHHHHHHHHHHHHhhhhHHHHhHHHHHHhhcCCcchhhHHhHHHHHH-HHHHHHHhhhHHHHHHHHh
Q 011783 370 ----GF------GLAFLLNCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIAMTG-MSLFKAAGPAGGGALFSWA 437 (477)
Q Consensus 370 ----~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~-~~~g~~~~~~~~g~l~~~~ 437 (477)
+. .....+++..++..+............+.+.+|+++|.-+.|+...+ +-+|.+-+|.+.|.+.|..
T Consensus 504 ~a~~g~C~~~C~~~~~~f~~~~~~~~~~~~~~~~p~~~i~lR~V~~~~rs~alg~~~~~~rllg~iP~pi~fG~~iD~s 582 (633)
T TIGR00805 504 SAKKGLCNPPCATSLLYFLILFIPLSFIAFITAVPLYMVLLRVVNPEEKSLAIGLQWLCMRVFATIPAPILFGLLIDVS 582 (633)
T ss_pred CCcCCCCCcccchhHHHHHHHHHHHHHHHHhccCchheEEeeccCcccchHHhhHHHHHHHHhcCCChhHHHhhhhhch
Confidence 00 01122222223223333333444455667789999999999999875 5678899999999999964
No 88
>TIGR00901 2A0125 AmpG-related permease.
Probab=99.96 E-value=1.1e-26 Score=218.78 Aligned_cols=331 Identities=11% Similarity=0.152 Sum_probs=227.2
Q ss_pred hhchHhHHHHHHHHhcccccchhhhhhhHHHHHHHHHHHHHHhhhhhhhhhhc-----CCchh-hHHHHHHHHHHHHHHH
Q 011783 57 ISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRY-----GRKPV-IIMGTASVVIFNTLFG 130 (477)
Q Consensus 57 ~~~~~~~~~~~~~~~~~s~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~-----Grr~~-~~~~~~~~~i~~~~~~ 130 (477)
.....+.+|.+.+|+|.|.++ +|++.+. .+...+ .+++|+++||+ ||||. ++.+.++.++.....+
T Consensus 4 ~~~~~~~~~~~~~~~g~s~~~------~g~~~~~-~~~~~~-~~~~g~~~Dr~~~~~~Grr~~~l~~~~~~~~~~~~~l~ 75 (356)
T TIGR00901 4 LGLVGNTLPYWLRSKNVSLKT------IGFFSLV-GLPYSL-KFLWSPLVDTVYLPFFGRRRSWLVLTQVLLLSLLLILS 75 (356)
T ss_pred chhHHhHHHHHHHHcCCCHHH------HHHHHHH-HHHHHH-HHHHHHHHhcccCCCCCccHHHHHHHHHHHHHHHHHHH
Confidence 456778899999999999999 9999766 555555 99999999998 89997 5677788887777777
Q ss_pred hh---hhHHHHHHHHHHhhhcccchhhH-HHHhhhhccccchhhHHHHHHHHhHHHHHHHHhHHHHhhhcccc-CCcccc
Q 011783 131 LS---VNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEK-YPNLFS 205 (477)
Q Consensus 131 ~~---~~~~~l~~~r~l~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~-~~~~~~ 205 (477)
+. .+.+.+....++.+++.+...+. .+++.|++|+|+|+++.++...+..+|.++++.+++.+.+.... .....+
T Consensus 76 ~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~~~G~~~~~~l~~~l~~~~g~~~~~~~~ 155 (356)
T TIGR00901 76 FLVPSTDLPLLAGLAFLIAFFSATQDIALDAWRLEILSDEELGYGSTIYIVGYRAGMLLSGSLALVLASPEFANTGLITL 155 (356)
T ss_pred cCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhhhchHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccccc
Confidence 76 46667777788888888887777 99999999999999999999999999999999999988873211 000112
Q ss_pred cccccccccchHHHHHHHHH-hhccccccCCCCCCccchhhhhhhhhhccchhhcccCCchhhhhhcchh---hHHHHHH
Q 011783 206 SESLFGKFPYFLPCLCISLF-AFGETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKSLLKNWP---LMSSIIV 281 (477)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~ 281 (477)
||..|..........+...+ ..+|..+. ++++ ++. +.+.....+++++++. ++...+.
T Consensus 156 wr~~f~i~ai~~l~~~~~~~~~~~e~~~~---~~~~-~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~~ 217 (356)
T TIGR00901 156 WGYIFFWTALLILPGLLVTLFLAKEPQED---ASVP-KPL--------------TQAVLKPIREFFQRKNMIQALLLLLL 217 (356)
T ss_pred cHHHHHHHHHHHHHHHHHHHHhccCCCcc---cccc-hhH--------------HHHHHHHHHHHHHhcCchHHHHHHHH
Confidence 55555211111111111111 22332111 0000 000 0011124556677765 6655555
Q ss_pred HHHHHhhhhhhHHHHHHhhcCcccCCccccchhhhHHHHHHHHH-HHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHH
Q 011783 282 YCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGF-SLLVFQLSLYPFLERILGPIMVARIAGVLTIPLLT 360 (477)
Q Consensus 282 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~-~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 360 (477)
.++..........+.+.|+.+ +|+++.+.+.+....+. ..+++.+ +++++.||+|+|+.+..+.++..+...
T Consensus 218 ~~~~~~~~~~~~~~~~~~l~~------~g~~~~~~g~~~~~~~~~~~~~g~~-~~g~l~~r~g~~~~l~~~~~~~~~~~~ 290 (356)
T TIGR00901 218 IVLYKLGDSAATVLTTLFLLD------MGFSKEEIALVAKINGLLGAILGGL-IGGIIMQPLNILYALLLFGIVQALTNA 290 (356)
T ss_pred HHHHHHHHHHHHHHHHHHHHH------cCCCHHHHHHHhHHHHHHHHHHHHH-HHHHHHhhhhHHHHHHHHHHHHHHHHH
Confidence 555565566666777777654 68999999988887774 5566665 899999999999998888877776655
Q ss_pred HHHHHHHhhh-----hhHHHHHHHHHHHHhhhhHHHHhHHHHHHhhcCCcchhhHHhHHHHHHHH
Q 011783 361 SYPYIAMLSG-----FGLAFLLNCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIAMTGMS 420 (477)
Q Consensus 361 ~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~ 420 (477)
.+.+...... ......+....++.+++.+...+...++.++.+|+++||+.+|+.++..+
T Consensus 291 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~ 355 (356)
T TIGR00901 291 GFVWLASNGHHDGITFPHLLMLFLTITLEAVTGGLGTVAFVAFLSKLSNPKFGATQMALLSSLSA 355 (356)
T ss_pred HHHHHHhcCcccccccchHHHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHh
Confidence 5444321110 01112334444555677788899999999999999999999999887654
No 89
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism]
Probab=99.96 E-value=1.4e-26 Score=222.19 Aligned_cols=396 Identities=16% Similarity=0.150 Sum_probs=284.3
Q ss_pred CchhHHHHHHHHHHHhhhchhchHhHHHHHHHHhcccccchhhhhhhHHHHHHHHHHHHHHhhhhhhhhhhcCCchhhHH
Q 011783 38 LPITELFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIM 117 (477)
Q Consensus 38 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~Grr~~~~~ 117 (477)
+.|-.....++......-....++.+.+.++++++.+.++ ++|+.++....+.+..|+.+.+.||+|.|.+.+.
T Consensus 43 ~gWvV~~a~fl~~~~~~g~~~~~Gv~~~~~~~~f~~s~~~------~~~i~sl~~~~~~~~gpl~s~l~~rfg~R~v~i~ 116 (509)
T KOG2504|consen 43 WGWVVVFASFLVNLSTDGLINSFGLLFEELMDYFGSSSSQ------IAWIGSLLLGVYLLAGPLVSALCNRFGCRTVMIA 116 (509)
T ss_pred eeeeeeHhHHHHHHhhhcchheehhhHHHHHHHhCCCccH------HHHHHHHHHHHHHHhccHHHHHHhhcCchHHHHH
Confidence 3444444444444444444456667889999999999999 9999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhhhhHHHHHHHH-HHhhhcccchh-hHHHHhhhhccccchhhHHHHHHHHhHHHHHHHHhHHHHhhh
Q 011783 118 GTASVVIFNTLFGLSVNFWMAVLTR-FLLGSLNGLLG-PIKAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQ 195 (477)
Q Consensus 118 ~~~~~~i~~~~~~~~~~~~~l~~~r-~l~G~~~g~~~-~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~ 195 (477)
|.++.+++.++.++++++|++++.. ++.|+|.|+.. |+..++..+|+ ++|+.+.|+...+.++|.++-|.+..++.+
T Consensus 117 G~~v~~~g~~lssF~~~i~~l~lt~gvi~G~G~~~~~~paiviv~~YF~-kkR~lA~Gia~~GsG~G~~~~~~l~~~l~~ 195 (509)
T KOG2504|consen 117 GGLVAALGLLLSSFATSLWQLYLTFGVIGGLGLGLIYLPAVVILGTYFE-KKRALATGIAVSGTGVGTVVFPPLLKYLLS 195 (509)
T ss_pred HHHHHHHHHHHHHHHhhHHHHHHHHHHHhhccchhhhcchhhhhhhHhH-HHHHHHHhhhhccCCcceeeHHHHHHHHHH
Confidence 9999999999999999999988876 88899988855 45888887775 889999999999999999999999999998
Q ss_pred ccccCCcccccccccccccch-HHHHHHHHHhhccccccCCC---------------------CCCccchhhhh-----h
Q 011783 196 PAEKYPNLFSSESLFGKFPYF-LPCLCISLFAFGETLHRHND---------------------DDDSCDVSYDA-----L 248 (477)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~~~~~~~~---------------------~~~~~~~~~~~-----~ 248 (477)
.+|||..+...... +-.++.....-|..+..++. +..+.+....+ .
T Consensus 196 -------~~G~r~~~l~~~~~~l~~~~~~~~~rp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (509)
T KOG2504|consen 196 -------KYGWRGALLIFGGISLNVLVAGALLRPLSPPKKPNEEKDLRNSAASVESTPKPVELRISERDSGLKKLSLSNL 268 (509)
T ss_pred -------HhCcHHHHHHHHHHHHHHHHHHHHcCCCCcCCCchhhhhhccccccccccccccccccccCCCCCCcccccch
Confidence 56666554211111 12222222333322221111 00000000000 0
Q ss_pred hhhhccchhhc-ccCCch----hhhhhcchhhHHHHHHHHHHHhhhhhhHHHHHHhhcCcccCCccccchhhhHHHHHHH
Q 011783 249 ESASAEVKEEE-GREATP----KKSLLKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAIT 323 (477)
Q Consensus 249 ~~~~~~~~~~~-~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~ 323 (477)
....+..++.+ ...+.. ..++++++.++...+...+..........+++.|..+ .+++..+++.++++.
T Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~d~~ll~~~~fl~~~~~~~~~~~g~~~p~~~l~~~~~~------~g~~~~~aa~l~Sii 342 (509)
T KOG2504|consen 269 ATLKRGPDKWRNSPLQAFLSMLDLSLLKDPKFLLLALSNLFAYLGFNVPFVYLPSYAKS------LGLSSNDAAFLLSII 342 (509)
T ss_pred hhhhhCCccccccchhhhhhhhhHHHHcCchHHHHHHHHHHHHHHHHHHHHHHHHHHhh------cCCChhhhHHHHHHH
Confidence 00000000000 011112 2578899999988888888877777777777777764 899999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhhcc--hhHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhhhhHHHHhHHHHHHhh
Q 011783 324 GFSLLVFQLSLYPFLERILGP--IMVARIAGVLTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNR 401 (477)
Q Consensus 324 ~~~~~~~~~~~~~~l~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 401 (477)
++..+++++ +.|++.|+... +.....+.+..++.....++... ...+.....+.++..+.........+.+
T Consensus 343 gi~~i~gRi-~~G~laD~~~~~~~~~~~~~ll~~gl~~~~~p~~~~------~~~l~~~~~~fG~~~g~~~~l~~~i~~~ 415 (509)
T KOG2504|consen 343 GVSDIIGRI-ILGLLADKPGIRALVLFLLTLLIAGLARLFLPFATT------YVGLIVFSILFGFCVGSFSSLTPVILVD 415 (509)
T ss_pred HHhhhhhhh-hhhhhcCccccchHHHHHHHHHHHHHHHHHHHHhcc------HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999 99999999773 33444444444444444444333 2344555555566767777777778899
Q ss_pred cCCcchhhHHhHHHHHHHHHHHHHhhhHHHHHHHHhhhhccccCCCCchHHHHHHHHHHHHHHHHHhh
Q 011783 402 AVDQDQRGAANGIAMTGMSLFKAAGPAGGGALFSWAQKRLDASFLPGSQMVFFVLNVVEAIGVLMTFK 469 (477)
Q Consensus 402 ~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 469 (477)
.++.++-..+.|+...+..++..+||.++|.+.|..+ +|...|++++++.+++..+.+.
T Consensus 416 ~~g~~~l~~a~Gl~l~~~gi~~l~gpPiag~~~d~tg---------~Y~~~f~~~g~~~~~s~~~~~~ 474 (509)
T KOG2504|consen 416 LVGLEKLSNAYGLLLLFQGIGALVGPPIAGLLYDITG---------NYDHAFYFCGLCFLLSAVLLLI 474 (509)
T ss_pred HcChhhcchHHHHHHHHhHHHHHcCcccceeeeeccC---------CeeeehhhcChHHHHHHHHHHH
Confidence 9999999999999999999999999999999998872 3778999998888888765544
No 90
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=99.96 E-value=2.3e-25 Score=194.88 Aligned_cols=354 Identities=16% Similarity=0.108 Sum_probs=282.6
Q ss_pred chhchHhHHHHHHHHhcccccchhhhhhhHHHHHHHHHHHHHHhhhhhhhhhhcCCchhhHHHHHHHHHHHHHHHhhhhH
Q 011783 56 PISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLSVNF 135 (477)
Q Consensus 56 ~~~~~~~~~~~~~~~~~~s~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~Grr~~~~~~~~~~~i~~~~~~~~~~~ 135 (477)
..+.+.|.++++.+|+|.|.+. .|++.+...+...+.+++..+++.|+|.++.+..++++.+++.++-... +.
T Consensus 27 ~itsvgPLL~~Ir~~~gls~s~------aGlLTtLPll~fg~~ap~a~~Lar~~g~er~l~~~Llli~~G~~iR~~~-~~ 99 (395)
T COG2807 27 AITSVGPLLDEIRQDLGLSFSV------AGLLTTLPLLAFGLFAPAAPRLARRFGEERSLFLALLLIAAGILIRSLG-GL 99 (395)
T ss_pred hhhhhhhhHHHHHHHhcccHHH------HHHHHHHHHHHHHHHHhhhHHHHHHHhhHHHHHHHHHHHHHHHHHHhcc-cH
Confidence 4567889999999999999999 9999999999999999999999999999999999999999999998877 77
Q ss_pred HHHHHHHHHhhhcccchhhH-HHHhhhhccccchhhHHHHHHHHhHHHHHHHHhHHHHhhhccccCCccccccccccccc
Q 011783 136 WMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSESLFGKFP 214 (477)
Q Consensus 136 ~~l~~~r~l~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 214 (477)
+.++..-.+.|.+.+...+. +++|-+.+| |+-+..+|+|....++|..+++.+...+.++..+||....+ +
T Consensus 100 ~~L~~gt~l~G~gIav~nVLLPslIK~~Fp-k~~~~mtglYs~sl~~~aaLaa~lavpla~~~~gW~~aL~~------W- 171 (395)
T COG2807 100 PLLFLGTLLAGAGIAVINVLLPSLIKRDFP-KRVGLMTGLYSTSLGAGAALAAALAVPLAQHSGGWRGALGF------W- 171 (395)
T ss_pred HHHHHHHHHHHhhHHHHHHhhhHHHHhhcc-cchhhHHhHHHHHHHHHHHHHhhhhhHHHHhhccHHHHHHH------H-
Confidence 88899999999999999888 999999998 67899999999999999999999999999865455544332 1
Q ss_pred chHHHHHHHHHhhccccccCCCCCCccchhhhhhhhhhccchhhcccCCchhhhhhcchhhHHHHHHHHHHHhhhhhhHH
Q 011783 215 YFLPCLCISLFAFGETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKSLLKNWPLMSSIIVYCVFSLHDMAYSE 294 (477)
Q Consensus 215 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (477)
.+...+..+.++|...+.+... .+....+..+++|+|.-|...+.+.+.+...++...
T Consensus 172 -Al~allAl~~WlPq~~r~~~~~---------------------~~~~~~~~~~vw~~~~aW~vtLfmGlqS~~~Y~~~~ 229 (395)
T COG2807 172 -ALLALLALLIWLPQALREQAAS---------------------IATKLVSVRKVWRSPLAWQVTLFMGLQSLLYYIVIG 229 (395)
T ss_pred -HHHHHHHHHHHhhhcccccccc---------------------cccccccccccccCchhHHHHHHHHhhHHHHHHHHH
Confidence 2334455566777653222111 111112345688999999999999999999999999
Q ss_pred HHHHhhcCcccCCccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHhh-cchhHHHHHHHHHHHHHHHHHHHHHhhhhhH
Q 011783 295 IFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERIL-GPIMVARIAGVLTIPLLTSYPYIAMLSGFGL 373 (477)
Q Consensus 295 ~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 373 (477)
++|.++.+ .|+|+.+.|.+.+...+..+..++ ..+.+.+|. ++|+.......++.++.+.+.+.+.. ....
T Consensus 230 WLP~ili~------~G~sa~~aG~llsl~~l~~~~~~l-l~P~la~R~~n~r~~~~~~~~~~l~G~~G~~~~P~~-~~~l 301 (395)
T COG2807 230 WLPAILID------RGLSAAEAGSLLSLMQLAQLPTAL-LIPLLARRSKNQRPLVVLALLLMLVGLVGLLLAPGQ-LPIL 301 (395)
T ss_pred HHHHHHHH------cCCCHHHhhhHHHHHHHHHHHHHH-HHHHHHHHhcccchHHHHHHHHHHHHHHHHHHhhhh-HHHH
Confidence 99988876 799999999999999999999998 888888864 56777777777777777766655432 2222
Q ss_pred HHHHHHHHHHHhhhhHHHHhHHHHHHhh-cCCcchhhHHhHHHHHHHHHHHHHhhhHHHHHHHHhhhhccccCCCCchHH
Q 011783 374 AFLLNCASVVKNLLSVSIITGLFILQNR-AVDQDQRGAANGIAMTGMSLFKAAGPAGGGALFSWAQKRLDASFLPGSQMV 452 (477)
Q Consensus 374 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~g~~~~ 452 (477)
| .++.|++.++.++.....+.. .-+++..++-.|+.+.++++-.+.||.+.|++.|.+ ++|+..
T Consensus 302 w------~~llG~G~G~~F~laL~li~~rs~~a~~Aa~LSgmaQg~GYllAa~GP~l~G~lhDa~---------gsw~~~ 366 (395)
T COG2807 302 W------ALLLGLGQGGAFPLALTLILLRSSDAAIAAALSGMAQGVGYLLAAFGPWLFGFLHDAT---------GSWSAP 366 (395)
T ss_pred H------HHHHhCccchHHHHHHHHHHhhcCChHHHHHHHHHhhhhhHHHHhhhhhhHhHHHHhc---------CChHHH
Confidence 2 234466777888877776655 445678888999999999999999999999999998 367777
Q ss_pred HHHHHHHHHHHHHHHhh
Q 011783 453 FFVLNVVEAIGVLMTFK 469 (477)
Q Consensus 453 ~~~~~~~~~~~~~~~~~ 469 (477)
+...+...+...+.-+.
T Consensus 367 ~~~l~~~~i~m~i~Gl~ 383 (395)
T COG2807 367 LVLLALATLLMLIFGLR 383 (395)
T ss_pred HHHHHHHHHHHHHHHhh
Confidence 77777666666555443
No 91
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=99.95 E-value=1.3e-25 Score=215.42 Aligned_cols=362 Identities=14% Similarity=0.146 Sum_probs=245.8
Q ss_pred hhhchhchHhHHHHHHHHhcccccchhhhhhhHHHHHHHHHHHHHHhhhhhhhhhhcCCchhhHHHHHHHHHHHHHHHhh
Q 011783 53 TALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLS 132 (477)
Q Consensus 53 ~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~Grr~~~~~~~~~~~i~~~~~~~~ 132 (477)
.++........++.+.+|+|-++. ..|+.+++.++.++..++.|+++|.||||.+++.+.++..++.++++.+
T Consensus 56 ~~~~~~~~a~~l~~I~~diG~~~~-------~~w~~~~~~l~~av~~~~~G~LSDlfGRr~~~i~g~~l~vvG~Iv~atA 128 (599)
T PF06609_consen 56 AYFVLVLPASILPYINADIGGSDN-------WSWFSTAWTLASAVSFPFVGRLSDLFGRRYFFIIGSLLGVVGSIVCATA 128 (599)
T ss_pred HHHHHhccHHHHHHHHHhcCCCcc-------chHHHHHHHHHHHHHHHhhHHHHHHhcchHHHHHHHHHHHhHHHHhhcC
Confidence 344555556778899999998765 5999999999999999999999999999999999999999999999999
Q ss_pred hhHHHHHHHHHHhhhcccchhhHHHHhhhhccccchhhHHHHHHHHhHHHHHHHHhHHHHhhhccccCCccccccccccc
Q 011783 133 VNFWMAVLTRFLLGSLNGLLGPIKAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSESLFGK 212 (477)
Q Consensus 133 ~~~~~l~~~r~l~G~~~g~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~ 212 (477)
+|...++++-.+.|+|.|........++|..|.|.|....++...........+|.++..+.. ..+|||.|+...++
T Consensus 129 ~~~~~~iag~~l~GvgaG~~~~~~~~isEl~p~k~R~~~~~~~~~~~i~~~~~~~~ia~~~~~-~~~WRw~~~~~~i~-- 205 (599)
T PF06609_consen 129 QNMNTFIAGMVLYGVGAGVQELAALAISELVPNKWRGLGLAIASIPFIITTWISPLIAQLFAA-HSGWRWIFYIFIIW-- 205 (599)
T ss_pred CcHHHHHHHHHHHHHhhHHHHHHHHHHHHhcccchhhhHhHHHHHHHHhhhcccHHHHHHhcc-CCCcchHHHHHHHH--
Confidence 999999999999999988877666679999999999988887776666666677888776654 46888888655443
Q ss_pred ccchHHHHHHHHHhhccccccCCCCCCccchhhhhhh-------------------------hhhccch-----------
Q 011783 213 FPYFLPCLCISLFAFGETLHRHNDDDDSCDVSYDALE-------------------------SASAEVK----------- 256 (477)
Q Consensus 213 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~-------------------------~~~~~~~----------- 256 (477)
..+.+....++..|.+++..+.++...++..++++ ..+++.+
T Consensus 206 --~~i~~vl~~~fY~PP~~~~~~~~~~s~~~~l~~lD~IG~~L~~~Gl~LfLlgl~wgG~~~~~W~Sa~VIa~lviG~~~ 283 (599)
T PF06609_consen 206 --SGIALVLIFFFYFPPPRAQLHGRKLSKREQLKELDWIGIFLFIAGLALFLLGLSWGGYPYYPWKSAHVIAPLVIGFVL 283 (599)
T ss_pred --HHHHHHHHHHHhCCCchhhhccccCcHHHHHHHhhHHHHHHHHHHHHHHHHHHhccCCCCCCCCCccchhhHHHHHHH
Confidence 11222222333334332221111111111111111 0111111
Q ss_pred -------hh--cccCCchhhhhhcc-hhhHHHHHHHHHHHhhhhhhHHHHHHhhcCcccCCccccch---hhhHHHHHHH
Q 011783 257 -------EE--EGREATPKKSLLKN-WPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYST---QMVGEVLAIT 323 (477)
Q Consensus 257 -------~~--~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~---~~~g~~~~~~ 323 (477)
|. ..+++....+++|+ |.+...++..++....+++...++|...... ++-++ ...+......
T Consensus 284 Lv~F~~wE~~~~~~~Pl~P~~Lf~~~r~~~~~lvi~fi~G~~~~s~~~l~p~~~~~v-----f~~d~~~~~~~~~~s~~~ 358 (599)
T PF06609_consen 284 LVAFVVWEWFGAPKDPLFPHRLFKDRRGFAALLVISFISGMNFFSVNILWPQQVVNV-----FGSDPISITEIGWISSPV 358 (599)
T ss_pred HHHHHHhhhhccCCCCcCCHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh-----ccCCCcccceeehhhhhH
Confidence 11 12355667788887 5555555666666666666666777665544 33333 2467777778
Q ss_pred HHHHHHHHHHHHHHHHHhhcch-hHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhhhhHHHHhHHHHHHhhc
Q 011783 324 GFSLLVFQLSLYPFLERILGPI-MVARIAGVLTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRA 402 (477)
Q Consensus 324 ~~~~~~~~~~~~~~l~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 402 (477)
+++..+++. +.+.+.++.++. +.+..+.+++.+++..+......+.. ..+ ...++.+++.+..........+-.
T Consensus 359 ~fg~~~g~~-i~g~l~~~ir~~Kw~li~~~~~~ta~~Gama~~~~~n~~-~~i---~~~~l~g~giG~~~~~~~~~~ql~ 433 (599)
T PF06609_consen 359 GFGSCAGAV-ILGLLFSKIRHIKWQLIFGSVLMTAFCGAMAAVRPDNKN-AAI---AFLVLAGFGIGGILVPAIVIAQLI 433 (599)
T ss_pred HHHHHHHHH-HHHHHHHHccchhHHHHHHHHHHHHHHHHHHHccCCCcc-hHH---HHHHHHHHhHHHHHHHHHHeeEee
Confidence 888888877 667777777754 44456665555554544444332222 222 222333455566666667777788
Q ss_pred CCcchhhHHhHHHHHHHHHHHHHhhhHHHHHHHH
Q 011783 403 VDQDQRGAANGIAMTGMSLFKAAGPAGGGALFSW 436 (477)
Q Consensus 403 ~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~ 436 (477)
+|++..|++.|+..+++.+|+.+|..+...++..
T Consensus 434 ~p~~~ig~a~gL~~s~R~~GGsIg~aIy~~I~~n 467 (599)
T PF06609_consen 434 VPDEDIGTATGLTGSIRSIGGSIGYAIYNAIFTN 467 (599)
T ss_pred eCchHHHHHHHHHHHHHHHhhHHHHHHHHHHHHh
Confidence 9999999999999999999999999988777754
No 92
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=99.95 E-value=6.5e-26 Score=219.90 Aligned_cols=350 Identities=14% Similarity=0.082 Sum_probs=235.6
Q ss_pred hhhchhchHhHH-HHHHHHhcccccchhhhhhhHHHHHHHHHHHHHHhhhhhhhhhh----cCCch-hhHHHHHHHHHHH
Q 011783 53 TALPISSLFPFL-YFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADR----YGRKP-VIIMGTASVVIFN 126 (477)
Q Consensus 53 ~~~~~~~~~~~~-~~~~~~~~~s~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~Dr----~Grr~-~~~~~~~~~~i~~ 126 (477)
..+......+.+ +.+.+++|.++.+ +|++.++..+..++..|+.|+++|| +|||| .++.+....+++.
T Consensus 11 ~~~~~~~~~~~l~~~~~~~~g~s~~~------~g~i~~~~~i~~~i~~p~~G~lsDr~~~r~Grrr~~i~~~~~~~~i~~ 84 (437)
T TIGR00792 11 NNFIFAIVSTYLLFFYTDVLGLSAAF------VGTLFLVARILDAITDPIMGNIVDRTRTRWGKFRPWLLIGAIPFSIVL 84 (437)
T ss_pred HHHHHHHHHHHHHHHHHHccCCCHHH------HHHHHHHHHHHHHhccchheEeeecCCCCCCCcchhHHHhHHHHHHHH
Confidence 334445555545 4677789999999 9999999999999999999999998 67754 5777888888888
Q ss_pred HHHHhhhh------HHHHHHHHHHhhhcccchhhH-HHHhhhhc-cccchhhHHHHHHHHhHHHHHHHHhHHHHhhhccc
Q 011783 127 TLFGLSVN------FWMAVLTRFLLGSLNGLLGPI-KAYACEIF-REEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAE 198 (477)
Q Consensus 127 ~~~~~~~~------~~~l~~~r~l~G~~~g~~~~~-~~~i~~~~-~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~ 198 (477)
+++...++ +..+++.+++.+++.+...+. .++..|.. +++||++..++.+.+..+|..+++.+.+.+.....
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~R~~~~~~~~~~~~~g~~l~~~~~~~l~~~~~ 164 (437)
T TIGR00792 85 VLLFTTPDFSATGKLVYAYITYILLGLFYSFVNIPYWSLVPAITLDPRERESLSTFRRFGATLGGLLVAVIVLPLVSYFG 164 (437)
T ss_pred HHHHhCCCCCcchHHHHHHHHHHHHHHHHHhhcccHhhCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 87776653 567778888888887776555 88888887 47899999999999999998888777666654221
Q ss_pred cCCcccccccccccccchH-HHHHHHHHhhccccccCCCCCCccchhhhhhhhhhccchhhcccCCchhhhhhcchhhHH
Q 011783 199 KYPNLFSSESLFGKFPYFL-PCLCISLFAFGETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKSLLKNWPLMS 277 (477)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 277 (477)
+.....+|+..+....... +.........+|.++.. +++.+ ++.+..+..++++++|.++.
T Consensus 165 ~~~~~~g~~~~~~i~~~l~~~~~~~~~~~~~e~~~~~---~~~~~---------------~~~~~~~~~~~l~~~~~~~~ 226 (437)
T TIGR00792 165 GGDDKFGWFMFALVLALIGVVSLIICFFGTKERYSEI---PKNIE---------------KKLSLKQIFKALFKNDQLLI 226 (437)
T ss_pred CCcccccHHHHHHHHHHHHHHHHHHHHcCCEecCCCC---Ccccc---------------cCCCHHHHHHHHhCCHHHHH
Confidence 1111345554441111011 11111112233322100 00000 01112235677889999988
Q ss_pred HHHHHHHHHhhhhhhHHHHHHhhcCcccCCccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHH
Q 011783 278 SIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTIP 357 (477)
Q Consensus 278 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 357 (477)
.++..++..........+.+.|.... .+ ++.+.+.+.....++.+++.+ +.+++.||+|+|+.+..+..+..+
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~-~~~~~~~~~~~~~i~~ii~~~-~~~~l~~r~g~~~~~~~~~~~~~~ 299 (437)
T TIGR00792 227 LCLAYLFYNLAFNIKNGVQVYYFTYV-----LG-DPELFSYMGSIAIVAGLIGVL-LFPRLVKKFGRKILFAGGILLMVL 299 (437)
T ss_pred HHHHHHHHHHHHHHHcchhheeEeee-----cC-ChHHHHHHHHHHHHHHHHHHH-HHHHHHHHhCcHHHHHHHHHHHHH
Confidence 77777766655544444444443322 33 455667777777888888887 889999999999999888877777
Q ss_pred HHHHHHHHHHhhhhhHHHHHHHHHHHHhhhhHHHHhHHHHHHhhcCC-------cchhhHHhHHHHHHHHHHHHHhhhHH
Q 011783 358 LLTSYPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVD-------QDQRGAANGIAMTGMSLFKAAGPAGG 430 (477)
Q Consensus 358 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~g~~~g~~~~~~~~g~~~~~~~~ 430 (477)
+.+.+.+... + .....+...+.+++.+...+...++.+|..| ++.+|++.|+.+....+|..+++.+.
T Consensus 300 ~~~~~~~~~~--~---~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~g~~lg~~i~ 374 (437)
T TIGR00792 300 GYLIFFFAGS--N---LPLILVLIILAGFGQNFVTGLVWALVADTVDYGEWKTGVRAEGLVYSVRTFVRKLGQALAGFLV 374 (437)
T ss_pred HHHHHHHcch--h---HHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhcCccchHHHHHHHHHHHHHHHHHHHHHH
Confidence 6665544321 1 1122233344456666677777888887765 56689999999999999999999999
Q ss_pred HHHHHHhh
Q 011783 431 GALFSWAQ 438 (477)
Q Consensus 431 g~l~~~~~ 438 (477)
|.+.+..+
T Consensus 375 g~ll~~~G 382 (437)
T TIGR00792 375 GLILGIIG 382 (437)
T ss_pred HHHHHHcC
Confidence 99998763
No 93
>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism]
Probab=99.95 E-value=8.8e-29 Score=221.80 Aligned_cols=420 Identities=14% Similarity=0.066 Sum_probs=262.7
Q ss_pred HHHHHHHHHHHhhhchhchHhHHHHHHHHhc-cccc-chhhhhhhHHHHHHHHHHHHHHhhhhhhhhhhcCCchhhHHHH
Q 011783 42 ELFSIWIIVLCTALPISSLFPFLYFMIKDFQ-IAKR-EEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGT 119 (477)
Q Consensus 42 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~s~~-~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~Grr~~~~~~~ 119 (477)
.+.+..++.+.+..+...++.+.|.+...+. .+.. ....+...+.+..+..+|.++||++.|+++||+|||+++...+
T Consensus 42 ~i~iAG~GfftDsYDlF~I~lVt~il~~lY~~~~~~~g~~ps~i~~~Vn~~A~vGti~GQl~FG~lgD~~GRK~vYG~~l 121 (538)
T KOG0252|consen 42 AIIIAGMGFFTDSYDLFSISLVTKILGYLYYHGDESGGHYPSGVLALVNAAALVGTIFGQLFFGWLGDKFGRKKVYGKEL 121 (538)
T ss_pred HHHHhhhhhcccchhhhhHHHHHHHHHHHhcCCCCCCCcCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhcchhhhhHHH
Confidence 3445556677888888888888887776653 2211 1112223788999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhh-------hHHHHHHHHHHhhhcccchhhH-HHHhhhhccccchhhHHHHHHHHhHHHHHHHHhHHH
Q 011783 120 ASVVIFNTLFGLSV-------NFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGG 191 (477)
Q Consensus 120 ~~~~i~~~~~~~~~-------~~~~l~~~r~l~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~ 191 (477)
++..+++++++++. -.+++...|++.|+|.|..+|. .++.+|...++.||...+..-+..+.|...|.+++-
T Consensus 122 iImIi~t~~~~~s~~~~~~~~~m~~L~~~R~~LGiGIGGDYPlSAtI~SE~an~~~RGa~iaavFa~Qg~GilaG~ivt~ 201 (538)
T KOG0252|consen 122 IIMIICSALSGLSVGTTSPLGVMMTLCFFRFLLGIGIGGDYPLSATIMSESANKKTRGAFIAAVFAMQGFGILAGGIVAL 201 (538)
T ss_pred HHHHHHHHHhccCCCCCCCcchhhHHHHHHHHhhccccCCCcchHHHhhhhhhhccccceeEEEEEecchhHhhccHHHH
Confidence 99999999887742 3688999999999999999998 888899999999999999998888888888887776
Q ss_pred Hhhhcc---ccC-----CcccccccccccccchHHHHHHHHHhhccccccCCCCCCcc----chhhhhhhh----hhccc
Q 011783 192 FLAQPA---EKY-----PNLFSSESLFGKFPYFLPCLCISLFAFGETLHRHNDDDDSC----DVSYDALES----ASAEV 255 (477)
Q Consensus 192 ~l~~~~---~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~----~~~~~~~~~----~~~~~ 255 (477)
.+.... -+- +.-.-||..++...+..+.....-+.+||+.+......++. ++..+.... +.+..
T Consensus 202 Iv~~~fe~~~~~~~~~~~ld~vWRl~~glg~vpa~~~ly~Rl~M~Et~~Y~al~~~~~~~a~~d~~k~~~~~~~~~~~~~ 281 (538)
T KOG0252|consen 202 IVSAIFEKIFNGPSTYPHLDGVWRIIFGLGAVPALLVLYFRLKMPETARYTALVSKKLKQAAGDMKKVLSVDIEAESTAE 281 (538)
T ss_pred HHHHHHhccCCCCCCchHHHHHHHHHHHHHHHHHHHHHHhhhcCCcchhHHHHhhcCHhhhhhccccccccccchhhccc
Confidence 654311 111 11123444442111112222222234567766541111110 000011111 00000
Q ss_pred h--hhcccCCchhhhhhcch---hhHHHHHHHHHHHhhhhhhHHHHHHhhcCcccCCccccchhhhHH--------HHHH
Q 011783 256 K--EEEGREATPKKSLLKNW---PLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGE--------VLAI 322 (477)
Q Consensus 256 ~--~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~--------~~~~ 322 (477)
. ...++....+...+..+ .+......+++.-.+.+....+..... +..|+.+.+... ...+
T Consensus 282 ~~~~~~~~~~~~F~~~f~~~hg~~Llgt~~~WFllDiafy~~nL~~s~I~------~~ig~~~~~~~~~~~~~vA~~~~i 355 (538)
T KOG0252|consen 282 SDVPPPSNSFGLFSRLFLRWHGKHLLGTAGTWFLLDIAFYGQNLFQSVIF------SAIGVIPSANTYHELFKVAEGNLI 355 (538)
T ss_pred cCCCCcccccchHHHHHHHHHHHHHHHHHHHHHhhhhhhhccccHHHHHH------HhhccCCCcchHHHHHHHHHHHHH
Confidence 0 00111111122233233 233334444444443333333322222 224444443322 2222
Q ss_pred HHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHHHh-hhhhHHHHHHHHHHHHhhhhHHHHhHHHHHHhh
Q 011783 323 TGFSLLVFQLSLYPFLERILGPIMVARIAGVLTIPLLTSYPYIAML-SGFGLAFLLNCASVVKNLLSVSIITGLFILQNR 401 (477)
Q Consensus 323 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 401 (477)
..+++.+-..++...+.|++||++....++.++.+..+.+....+. .+.....+... +...++..+.......+.+|
T Consensus 356 ia~~~~vPGyw~tv~~id~iGRk~iq~~GF~~~~i~~~~~~~~y~~~~~~~Gf~v~y~--l~~ff~NFGPn~ttfivpaE 433 (538)
T KOG0252|consen 356 IAVCSTVPGYWFTVYFIDIIGRKYIQLMGFFIMTIFFFVIAGPYNQLENTIGFVVLYS--LTFFFGNFGPNATTFIVPAE 433 (538)
T ss_pred HHHHccCCceeEEEEEeehhhhHHHHHhhHHHHHHHHHHHcCCcccccccCceeehHH--HHHHHHhcCCCceeEEeehh
Confidence 2233333223356677999999999999999999888777665441 11122222222 22224455555666678899
Q ss_pred cCCcchhhHHhHHHHHHHHHHHHHhhhHHHHHHHHhhhhccccCCCCchHHHHHHHHHHHHHHHHHhhhhhhccC
Q 011783 402 AVDQDQRGAANGIAMTGMSLFKAAGPAGGGALFSWAQKRLDASFLPGSQMVFFVLNVVEAIGVLMTFKPFLAQRH 476 (477)
Q Consensus 402 ~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 476 (477)
.+|.+.|++..|+....+..|++++....+++.++. .++..+.+.++++.+.+++++.+..++ .||++
T Consensus 434 ~FParvR~t~hGIsAA~GK~GAivg~~~F~~~t~~~-----yp~~~g~~~v~~i~~~~~~~gi~~T~l--~pEtk 501 (538)
T KOG0252|consen 434 IFPARVRSTCHGISAASGKAGAIVGAFGFLYLTDHN-----YPPNIGVRNVFIILAGCMLLGILFTLL--IPETK 501 (538)
T ss_pred hchHHHhhhhhhHHHHhccchHHHHHHHhhHhhhcc-----CCccccchHHHHHHHHHHHHhHheeEE--eeccc
Confidence 999999999999999999999999999988887732 111128899999999999999998877 66654
No 94
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=99.95 E-value=2.6e-24 Score=201.87 Aligned_cols=389 Identities=16% Similarity=0.204 Sum_probs=277.8
Q ss_pred HHHHHHHhhhchhchHhHHHHHHHHhcccccchhhhhhhHHHHHHHHHHHHHHhhhhhhhhhhcC-CchhhHHHHHHHHH
Q 011783 46 IWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYG-RKPVIIMGTASVVI 124 (477)
Q Consensus 46 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~G-rr~~~~~~~~~~~i 124 (477)
+....++.++..+...|.++.+.++.|.|..| +|.+.+...+...+.++++|.++||++ +||++.+..++.++
T Consensus 7 Ls~~~f~~f~~~G~~~p~~~~~L~~~G~s~~q------IG~l~a~~~~~~i~~~~~~g~~aDr~~~~~~~l~~~~l~~~~ 80 (400)
T PF03825_consen 7 LSLMYFLYFFAYGAFLPYLPLYLESRGFSGTQ------IGILLAVGPLARIVSPPFWGAIADRFGSAKRILALLSLLSAL 80 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCCCHHH------HHHHHHHHHHHHHHHHHHHHHHHhHhhhHHHHHHHHHHHHHH
Confidence 45566777788888999999999999999999 999999999999999999999999986 57888888888888
Q ss_pred HHHHHHhhhhHHHHHHHHHHhhhcccchhhH-HHHhhhhccccchhhHHHHHHHHhHHHHHHHHhHH-HHhhhccccCCc
Q 011783 125 FNTLFGLSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALG-GFLAQPAEKYPN 202 (477)
Q Consensus 125 ~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~-~~l~~~~~~~~~ 202 (477)
........++++.+++.-++..+......|. .++..+... ++++-.|......++|.+++.... +.+.... ++.
T Consensus 81 ~~~~~~~~~~f~~~~~~~~l~~~~~~p~~pl~dsi~~~~~~--~~~~~YG~iRlwGSiGf~~~~~~~~~~~~~~~-~~~- 156 (400)
T PF03825_consen 81 ALLLLAFSSSFWWLFVIMLLFSFFFSPTMPLSDSIALSYLG--DRGKDYGRIRLWGSIGFIVAALAFGGLLGGYL-GIS- 156 (400)
T ss_pred HHHHHHHhccHHHHHHHHHHHHHHHccHHHHHHHHHHHHcc--cccCCCCcchhhhhHHHHHHHHHHHHHHHhhh-ccc-
Confidence 7777778889999888888888877777776 777777664 566777888888888888876542 3333211 111
Q ss_pred ccccccccccccchHHHHHHHHHhhccccccCCCCCCccchhhhhhhhhhccchhhcccCCchhhhhhcchhhHHHHHHH
Q 011783 203 LFSSESLFGKFPYFLPCLCISLFAFGETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKSLLKNWPLMSSIIVY 282 (477)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 282 (477)
.....+..............+.+|+.+++++.+++. +++...+..+++|+|++...++..
T Consensus 157 --~~~~~~~i~~~~~~ll~~~~l~lp~~~~~~~~~~~~------------------~~~~~~~~~~llk~~~~~~Fll~~ 216 (400)
T PF03825_consen 157 --GTSLIFYIAAILSLLLAGFALFLPKTPPKRSAKESV------------------KKLLGLDALKLLKNPRFLVFLLAA 216 (400)
T ss_pred --cccHHHHHHHHHHHHHHHHHHhCCCCccccccCCCc------------------ccccchHHHHHhcCccHHHHHHHH
Confidence 000011000001111112234556655222211111 111223446799999999988888
Q ss_pred HHHHhhhhhhHHHHHHhhcCcccCCccc-cchhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHH
Q 011783 283 CVFSLHDMAYSEIFSLWANSPKKLGGLN-YSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTIPLLTS 361 (477)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g-~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 361 (477)
++.......++.+.+.|+.+ .| .+....+..+++..+..++.-. ..+++.+|+|.++++.++.+..++=..+
T Consensus 217 ~l~~~~~~~~~~f~~~yl~~------~gg~~~~~~g~~~~l~~~aEi~~f~-~~~~~~~r~g~~~ll~~a~~~~~vR~~l 289 (400)
T PF03825_consen 217 FLIGISHAAYYTFFSIYLQE------LGGYSGSTIGILWALGVVAEIPFFF-FSGRFLKRFGIKWLLLLALVAYAVRWLL 289 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHH------cccchhhHHHHHHHHHHHHHHHHHH-HHHHHHHhcCHHHHHHHHHHHHHHHHHH
Confidence 88888888888888888876 45 6777788888888888888866 8899999999999999999888888877
Q ss_pred HHHHHHhhhhhHHHHHHHHHHHHhhhhHHHHhHHHHHHhhcCCcchhhHHhHHHHHH-HHHHHHHhhhHHHHHHHHhhhh
Q 011783 362 YPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIAMTG-MSLFKAAGPAGGGALFSWAQKR 440 (477)
Q Consensus 362 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~-~~~g~~~~~~~~g~l~~~~~~~ 440 (477)
+....+. ....+........+.+...+........++.+.+|++.|++++++++.. ..+|..+|..++|+++|+.+..
T Consensus 290 ~a~~~~~-~~~~~~~~~l~q~lhG~tf~~~~~a~~~yi~~~~p~~~~at~Q~l~~~~~~Glg~~iG~~igG~l~~~~g~~ 368 (400)
T PF03825_consen 290 YAYFSDP-WPFIVALQLLGQLLHGLTFGLFHAASVRYIDRIAPPELRATAQGLYSALSFGLGGAIGSLIGGWLYDAFGAR 368 (400)
T ss_pred HHHhcCC-cHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHhCCccchHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhcch
Confidence 7665321 1111222333345678888888999999999999999999999999886 4799999999999999987433
Q ss_pred ccccCCCCchHHHHHHHHHHHHHHHHHhhhhhhccCC
Q 011783 441 LDASFLPGSQMVFFVLNVVEAIGVLMTFKPFLAQRHD 477 (477)
Q Consensus 441 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 477 (477)
... .+...+.+.+++.++..++... ..||++|
T Consensus 369 ~~~----~~~~~~~v~a~~~~~~~~~f~~-~fk~~~~ 400 (400)
T PF03825_consen 369 GMF----DWSAVFLVFAVMALVILVLFVI-LFKPKHN 400 (400)
T ss_pred hhh----hHHHHHHHHHHHHHHHHHHHHh-hccCCCC
Confidence 211 3445666666666666666555 3555543
No 95
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only]
Probab=99.94 E-value=7.3e-25 Score=216.62 Aligned_cols=338 Identities=16% Similarity=0.123 Sum_probs=230.5
Q ss_pred HHHhcccccchhhhhhhHHHHHHHHHHHHHHhhhhhhhhhhcCCchhhHHHHHHHHHHHHHHHhhhhHHHHHHHHHHhhh
Q 011783 68 IKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLSVNFWMAVLTRFLLGS 147 (477)
Q Consensus 68 ~~~~~~s~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~l~~~r~l~G~ 147 (477)
.+.++.+... ..+..+++.+|..+|++++|+++||+|||++++.++++..++.++.++++|++.+++.|+++|+
T Consensus 110 ~~~~c~~~~~------~~~~~s~~~~G~~vG~~i~g~lsD~~GRk~~~~~~~~~~~i~~~~~a~a~~~~~~~~~Rfl~G~ 183 (521)
T KOG0255|consen 110 WNLVCDSSTL------VALGQSLFFLGVLVGSLIFGPLSDRFGRKPVLLVSLLLFIIFGILTAFAPNYWMFLIFRFLSGF 183 (521)
T ss_pred hceeeCcHhH------HHHHHHHHHHHHHHHHhhheehHhhcccHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHh
Confidence 4555666666 8999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccchhhH-HHHhhhhccccchhhHHHHHHHHhHHHHHHHHhHHHHhhhccccCCcccccccccccccchHHHHHHHHHh
Q 011783 148 LNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSESLFGKFPYFLPCLCISLFA 226 (477)
Q Consensus 148 ~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (477)
+.+..... ..+++|++++++|+.+..+ ......++.++++.++++.. +||+.++...+. ....++..+.
T Consensus 184 ~~~~~~~~~~~~~~E~~~~~~R~~~~~~-~~~~~~~~~~~~~~~a~~~~---~Wr~~~~~~~~~------~~~~~~~~~l 253 (521)
T KOG0255|consen 184 FGSGPLTVGFGLVAEIVSPKQRGLALTL-GGFFFVGGLMLPAGAAYITR---DWRWLFWIISIP------SGLFLLLWFL 253 (521)
T ss_pred hccchhHHhHhhheeecCcchhhHHHHH-HHHHHHHHHHHHHHHHHHHh---hHHHHHHHHHHH------HHHHHHHHHc
Confidence 97776666 9999999999999999999 88888888888888888876 677766654333 2222222444
Q ss_pred hccccccCCCCCCcc--chhhhhhhhh----hcc--------c-h---hhcccCCchhhhhhcchhhHHHHHHHHHHHhh
Q 011783 227 FGETLHRHNDDDDSC--DVSYDALESA----SAE--------V-K---EEEGREATPKKSLLKNWPLMSSIIVYCVFSLH 288 (477)
Q Consensus 227 l~~~~~~~~~~~~~~--~~~~~~~~~~----~~~--------~-~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 288 (477)
.||++++...+.+.. .+..++..+. ... . . ....+.+.....+++.+++....+...+..+.
T Consensus 254 ~~Es~rwl~~~g~~~~a~~~l~~~a~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~ 333 (521)
T KOG0255|consen 254 PPESPRWLLSKGRIDEAIKILKKIAKLNGRKLSVKELLRLELLLRPLKLLFTEPKISFLDLFRTPRLRYRTLYLLFIWFV 333 (521)
T ss_pred cCcChHHHHHcCchHHHHHHHHHHHhhcCCCCCcHHHHHHHHHhhHhhhhccCCCCchhhhhcCHHHHHHHHHHHHHHHH
Confidence 559998855443322 1111111100 000 0 0 00111224467777777554443333332211
Q ss_pred hhhhHHHHHHhhcCcccCCccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHHHh
Q 011783 289 DMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTIPLLTSYPYIAML 368 (477)
Q Consensus 289 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 368 (477)
.... |.........+|.+.. ......+........ ..+...++.|||.....+..+..++++...+....
T Consensus 334 ~~~~------y~gl~~~~~~lg~~~~---~~~~~~~~~~~p~~~-~~~~~~~~~gR~~~~~~~~~~~~~~~~~~~~~~~~ 403 (521)
T KOG0255|consen 334 FSLV------YYGLSLNVSGLGGNIY---LNFTLSGLVELPAYF-RNGLLLPEFGRRPPLFLSLFLAGIGLLLFGWLPDD 403 (521)
T ss_pred HhHH------HHhhhhhhhhcCchHH---HHHHHHHHHHhhHHH-HHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHhhcc
Confidence 1111 1111111122343332 233333334444444 66788899999999999999999998888877664
Q ss_pred hhh-hHHHHHHHHHHHHhhhhHHHHhHHHHHHhhcCCcchhhHHhHHHHHHHHHHHHHhhhHHHHHHH
Q 011783 369 SGF-GLAFLLNCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIAMTGMSLFKAAGPAGGGALFS 435 (477)
Q Consensus 369 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~ 435 (477)
... .++... .+..++....+...+.+..|.+|+..|..+.+..+....++.+++|.+.-....
T Consensus 404 ~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~el~pt~~r~~~~~~~~~~~~~~~i~ap~~~~~~~~ 467 (521)
T KOG0255|consen 404 LGGWLHWILP----LLGKFFIGSAFNLIFLYSAELIPTVVRNTAVGAISAAARLGSILAPLFPLLLRQ 467 (521)
T ss_pred chhHHHHHHH----HHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 432 122222 222344455555668899999999999999999999999999999998654444
No 96
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=99.94 E-value=2.2e-31 Score=259.13 Aligned_cols=409 Identities=18% Similarity=0.208 Sum_probs=261.6
Q ss_pred HHHHHHhhhchhchHhHHHHHH--HHhcccccchh---hhhhhHHHHHHHHHHHHHHhhhhhhhhhhcCCchhhHHHHHH
Q 011783 47 WIIVLCTALPISSLFPFLYFMI--KDFQIAKREED---IGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTAS 121 (477)
Q Consensus 47 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~s~~~~~---~~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~Grr~~~~~~~~~ 121 (477)
.++.+...++...+....+... .+++.+..... ...+.+++.+...+|..+|++++|.++||+|||+.+.++.++
T Consensus 6 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~G~~~~g~~~d~~GRk~~~~~~~~~ 85 (451)
T PF00083_consen 6 SLGGFLFGYDLGLIGSFASLLGFLQFFGWSSSESSCEKSSLLSSLLTSSFFIGAIVGALIFGFLADRYGRKPALIISALL 85 (451)
T ss_pred HHHHHHHHHHHHHHhhHHhhhhhhhccccccccccccchHHHHHHHHHHHHhhhcccccccccccccccccccccccccc
Confidence 3445777777777766665444 23333332211 123478999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhh---hHHHHHHHHHHhhhcccchhhH-HHHhhhhccccchhhHHHHHHHHhHHHHHHHHhHHHHhhhcc
Q 011783 122 VVIFNTLFGLSV---NFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPA 197 (477)
Q Consensus 122 ~~i~~~~~~~~~---~~~~l~~~r~l~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~ 197 (477)
..++.++.++++ |++.+.++|++.|++.|...+. ..++.|..|+++|++..++.+....+|..++..++..+....
T Consensus 86 ~~i~~~~~~~~~~~~~~~~~~~~R~~~G~~~g~~~~~~~~~~~E~~~~~~R~~~~~~~~~~~~~G~~~~~~~~~~~~~~~ 165 (451)
T PF00083_consen 86 MIIGSILIAFAPSYNNFWMLLIGRFLIGFGIGGAYVVSPIYISEIAPPKHRGFLSSLFQLFWALGILLASLIGYIVSYYS 165 (451)
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 999999999999 9999999999999999988777 999999999999999999999999999999988876663322
Q ss_pred --ccCCcccccccccccccchHHHHHHHHHhhccccccCCCCCC--ccchhhhhhhhhh---ccchh------hcccCCc
Q 011783 198 --EKYPNLFSSESLFGKFPYFLPCLCISLFAFGETLHRHNDDDD--SCDVSYDALESAS---AEVKE------EEGREAT 264 (477)
Q Consensus 198 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~--~~~~~~~~~~~~~---~~~~~------~~~~~~~ 264 (477)
..||..+....++ .+...+....+||+|++...+++ +.++..++.+... ++.++ +.++.+.
T Consensus 166 ~~~~Wr~~~~~~~~~------~l~~~~~~~~~pESP~wL~~~~~~~~A~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (451)
T PF00083_consen 166 DNWGWRILLIFGAIP------SLLVLLLRFFLPESPRWLLSKGRDEEAEKVLRKLRGKEIEDEEIEEIKAEKKESQESKA 239 (451)
T ss_pred ccccccccccccccc------cccccccccccccccceecccccccccccccccccccccccccccccccccccccccce
Confidence 2366655544433 33344555789999998543322 2222212211110 01111 0111113
Q ss_pred hhhhhhcchhh-HHHHHHHHHHHhhhhhhHHHHHHhhcCcccCCccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 011783 265 PKKSLLKNWPL-MSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILG 343 (477)
Q Consensus 265 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~ 343 (477)
.++++++++.. +.......+..............|. +...+..+.+.. -.......+...++.. ++.++.||+|
T Consensus 240 ~~~~l~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~--~~i~~~~~~~~~--~~~~~~~~~~~~~~~~-~~~~~~~~~G 314 (451)
T PF00083_consen 240 SWRDLFRNKKYRKRLLIALLLQFFQQFSGINFIFYYS--PSIFENAGISNS--FLATLILGLVNFLGTL-LAIFLIDRFG 314 (451)
T ss_pred eeeeccccccccccccccccccccccccccccccccc--cccccccccccc--cccccccccccccccc-cccccccccc
Confidence 46667776542 2222222222222111111122222 222333555555 1112222344444444 6678999999
Q ss_pred chhHHHHHHHHHHHHHHHHH--HHHHhhhh--hHHHHHHHHHHHHhhhhHHHHhHHHHHHhhcCCcchhhHHhHHHHHHH
Q 011783 344 PIMVARIAGVLTIPLLTSYP--YIAMLSGF--GLAFLLNCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIAMTGM 419 (477)
Q Consensus 344 ~~~~~~~~~~~~~~~~~~~~--~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~ 419 (477)
||+.+..+.....++...+. ........ .....+.........+..+..+..+.+..|.+|++.|+++.|+....+
T Consensus 315 Rr~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~~~g~~~~~~~~~~ElfPt~~R~~~~~~~~~~~ 394 (451)
T PF00083_consen 315 RRKLLIIGLLLMAICSLILGIIFFLGVSSSSWWSILSIVFLALFFAFFSLGWGPLPWIYTAELFPTKVRSTGIGLSYAVG 394 (451)
T ss_pred cccccccccccccccccccccccccccccccccccccceeeeeccccccccccccccccccccccccccccccccccccc
Confidence 99999988888777766554 11111110 111122222222223444566777788999999999999999999999
Q ss_pred HHHHHHhhhHHHHHHHHhhhhccccCCCCchHHHHHHHHHHHHHHHHHhhhhhhccCC
Q 011783 420 SLFKAAGPAGGGALFSWAQKRLDASFLPGSQMVFFVLNVVEAIGVLMTFKPFLAQRHD 477 (477)
Q Consensus 420 ~~g~~~~~~~~g~l~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 477 (477)
.++++++|.+...+.+.. +....+.+.+++++++.+..++ +.||+++
T Consensus 395 ~i~~~i~~~~~~~~~~~~----------~~~~~~~i~~~~~~i~~i~~~~-~lpET~g 441 (451)
T PF00083_consen 395 RIGGFIIPFLFPYLFNNL----------GGWGVFLIFAGVCLIAIIFVYF-FLPETKG 441 (451)
T ss_pred cccccccccccccccccc----------cccccchhhHHHHHHHHhheeE-EEeeCCC
Confidence 999999999888887766 3234566666666666655544 6888864
No 97
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=99.94 E-value=3.3e-23 Score=201.99 Aligned_cols=402 Identities=14% Similarity=0.076 Sum_probs=234.5
Q ss_pred hHHHHHHHHHHHhhhchhchHhHHH-HHHHHhcccccchhhhhhhHHHHHHHHHHHHHHhhhhhhhhhh-cCCchhhHHH
Q 011783 41 TELFSIWIIVLCTALPISSLFPFLY-FMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADR-YGRKPVIIMG 118 (477)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~s~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~Dr-~Grr~~~~~~ 118 (477)
+.++.++...+.+.+..+...+.++ ++.+++|.+..+ .+++.+.+........+++|+++|| +|||+.+.++
T Consensus 21 ~~~~~~~~~~~~~~~~~y~~~~~l~~yl~~~lg~s~~~------a~~~~~~~~~~~~~~~~~~G~LaDr~~G~r~~~~~g 94 (500)
T PRK09584 21 KAFYLIFSIELWERFGYYGLQGIMAVYLVKQLGMSEAD------SITLFSSFSALVYGLVAIGGWLGDKVLGTKRVIMLG 94 (500)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHH
Confidence 4467777888888888887777777 556889999988 8888888776666667899999999 5999999999
Q ss_pred HHHHHHHHHHHHhhh-hHHHHHHHHHHhhhcccchhhH-HHHhhhhccccc--hhhHHHHHHHHhHHHHHHHHhHHHHhh
Q 011783 119 TASVVIFNTLFGLSV-NFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEH--QALGLSTVSTAWGIGLIIGPALGGFLA 194 (477)
Q Consensus 119 ~~~~~i~~~~~~~~~-~~~~l~~~r~l~G~~~g~~~~~-~~~i~~~~~~~~--r~~~~~~~~~~~~~g~~~g~~~~~~l~ 194 (477)
.++.+++..++++++ +.+.+++.|+++|++.|...+. .++++|++|+++ |..++++++.+.++|..+||.+++++.
T Consensus 95 ~~~~~ig~~l~~~~~~~~~~l~~~~~l~gig~g~~~~~~~~l~~~~f~~~~~~~~~~~~~~~~~~~iG~~~gp~i~g~l~ 174 (500)
T PRK09584 95 AIVLAIGYALVAWSGHDAGIVYMGMATIAVGNGLFKANPSSLLSTCYEKDDPRLDGAFTMYYMSINIGSFFSMLATPWLA 174 (500)
T ss_pred HHHHHHHHHHHHHhcccHHHHHHHHHHHHHhhhcccCCHHHHHHHhcCCCchhhhhcchHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999998874 5667778899999999988887 899999998643 556889999999999999999999998
Q ss_pred hccccCCcccccccccccccchHHHHHHHHHhhccccccCC-CCC-Cccchhhhhh-------------hhhhccchhhc
Q 011783 195 QPAEKYPNLFSSESLFGKFPYFLPCLCISLFAFGETLHRHN-DDD-DSCDVSYDAL-------------ESASAEVKEEE 259 (477)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-~~~-~~~~~~~~~~-------------~~~~~~~~~~~ 259 (477)
+ .++|+..|..........++.++......++.. +++ ++.+.. +.. .....+.+..+
T Consensus 175 ~-------~~g~~~~F~i~~i~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (500)
T PRK09584 175 A-------KYGWSVAFALSVVGMLITVVNFAFCQRWVKQYGSKPDFEPINYR-KLLLTIVGVVALIAIATWLLHNQEIAR 246 (500)
T ss_pred H-------hhCHHHHHHHHHHHHHHHHHHHHHhHHHhccCCCCCCccccchh-hHHHHHHHHHHHHHHHHHHHhcchHHH
Confidence 8 455666552111111111111111111111110 000 001100 000 00000000000
Q ss_pred --------------ccCCchhhhhhcchhhHHHHHHHHHHHhhhhhhHHHHHHhhcC----cccCCccccchhhhHHHHH
Q 011783 260 --------------GREATPKKSLLKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANS----PKKLGGLNYSTQMVGEVLA 321 (477)
Q Consensus 260 --------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~g~~~~~~g~~~~ 321 (477)
.......++.-|+| .+..+... +.....+......+.++.. .......|+. ...+.+.+
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~-~~~i~f~~~~~q~~~~l~~~~~~~~~~~~~g~~-i~~~~~~s 323 (500)
T PRK09584 247 MALGVVALGIVVIFGKEAFAMKGAARRK-MIVAFILM-LEAIIFFVLYSQMPTSLNFFAIRNVEHSILGIA-VEPEQYQA 323 (500)
T ss_pred HHHHHHHHHHHHHHHHHHhhcCHHHHHH-HHHHHHHH-HHHHHHHHHHHHhccHHHHHHHHhccccccceE-ECHHHHHH
Confidence 00000001111222 22111111 1111112222222222211 0000001211 12455566
Q ss_pred HHHHHHHHHHHHHH----HHHHHhhcchhHHHHHHHHHHHHHHHHHHHHHhh---hhhHHHHHHHHHHHHhhhhHHHHhH
Q 011783 322 ITGFSLLVFQLSLY----PFLERILGPIMVARIAGVLTIPLLTSYPYIAMLS---GFGLAFLLNCASVVKNLLSVSIITG 394 (477)
Q Consensus 322 ~~~~~~~~~~~~~~----~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~ 394 (477)
.+.+..++..+ +. +++.+|.+..+.+..+.++.+++++.+....... .............+.+++.....|.
T Consensus 324 ~n~i~iil~~p-~~~~~~~~l~~r~~~~~~~~~G~~l~~l~f~~l~~~~~~~~~~~~vs~~~~~~~~~l~~~ge~~~~p~ 402 (500)
T PRK09584 324 LNPFWIMIGSP-ILAAIYNKMGDRLPMPHKFAIGMVLCSGAFLVLPLGAKFANDAGIVSVNWLIASYGLQSIGELMISGL 402 (500)
T ss_pred HhHHHHHHHHH-HHHHHHHHhCcCCCcHHHHHHHHHHHHHHHHHHHHHHHhcCCCCccCHHHHHHHHHHHHHHHHHHhHH
Confidence 66666666655 43 4445555566777788888888877766554321 1111224555666678899999999
Q ss_pred HHHHHhhcCCcchhhHHhHHHHHHHHHHHHHhhhHHHHHHHHhhhhc---cc-cCCCCchHHHHHHHHHHHHHH
Q 011783 395 LFILQNRAVDQDQRGAANGIAMTGMSLFKAAGPAGGGALFSWAQKRL---DA-SFLPGSQMVFFVLNVVEAIGV 464 (477)
Q Consensus 395 ~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~---~~-~~~~g~~~~~~~~~~~~~~~~ 464 (477)
..+++.+..|++.||+++|+......+|..+ .|.+.+...... +. ....++...|...++.+++..
T Consensus 403 g~s~~~~~aP~~~rg~~~g~~~l~~a~g~~~----~g~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~a 472 (500)
T PRK09584 403 GLAMVAQLVPQRLMGFIMGSWFLTTAGAALI----AGYVANLMAVPDNVTDPLMSLEVYGRVFLQIGIATAVIA 472 (500)
T ss_pred HHHHHHHhCcHHHHHHHHHHHHHHHHHHHHH----HHHHHHHhccccccccchhhhhhHHHHHHHHHHHHHHHH
Confidence 9999999999999999999765555544444 444443221100 00 000136677777776655443
No 98
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=99.93 E-value=5.3e-23 Score=188.92 Aligned_cols=381 Identities=14% Similarity=0.155 Sum_probs=252.0
Q ss_pred hhHHHHHHHHHHHhhhchhchHhHHHHHHH-HhcccccchhhhhhhHHHHHHHHHHHHHHhhhhhhhhhhcCCchhhHHH
Q 011783 40 ITELFSIWIIVLCTALPISSLFPFLYFMIK-DFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMG 118 (477)
Q Consensus 40 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~s~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~Grr~~~~~~ 118 (477)
++..+......+..++..+...|..|...+ +.|++.++ +|.+.++..+...+.+|+.|.++||+|.||-++..
T Consensus 6 ~~~~~~~s~~~f~~Ff~~gi~~pF~~iWL~~~~GLs~~~------iG~i~s~~~~~~l~~qp~~G~i~Dklg~kK~Ll~~ 79 (412)
T PF01306_consen 6 NKNYWWLSLFYFFYFFIWGIFLPFFPIWLTQVAGLSGTE------IGIIFSAGSLFALLAQPVYGFISDKLGLKKHLLWF 79 (412)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHH------HHHHHHHHHHHHHHTHHHHHHHHHHCTTCSHHHHH
T ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHHHHccccCCCHHH------HHHHHHHHHHHHHHHHHhHHHhcchhhhhHHHHHH
Confidence 356777777888888889999999997665 48999999 99999999999999999999999999977766554
Q ss_pred HHHHHH--HH-HHHHhhh----hHH-HHHHHHHHhhhcccchhhH-HHHhhhhccccchhhHHHHHHHHhHHHHHHHHhH
Q 011783 119 TASVVI--FN-TLFGLSV----NFW-MAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPAL 189 (477)
Q Consensus 119 ~~~~~i--~~-~~~~~~~----~~~-~l~~~r~l~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~ 189 (477)
+....+ +. +...+.+ |++ ..+++-...|+......|. -+++.++. ++.+.-.|-..+..++|.+++..+
T Consensus 80 i~~l~~l~~pff~~v~~pll~~n~~lg~iig~i~l~~~f~~~~~~~Ea~~er~s--r~~~feYG~~R~wGSig~ai~s~~ 157 (412)
T PF01306_consen 80 IAILLLLFGPFFIYVFGPLLQSNFWLGAIIGGIYLGLVFNAGVPLSEAYAERVS--RRNGFEYGRARMWGSIGFAIASLL 157 (412)
T ss_dssp HHHHHHTCHHHHHHTHHHHHHTT-HHHHHHTTTTTTTTTTTHHHHHHHHHHHHH--HHHSS-HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccchHHHHHHHHHH--HHhcCCcchHHHHhhHHHHHHHHH
Confidence 433322 22 2222322 221 1222222233333333444 55555443 455677788888999999999999
Q ss_pred HHHhhhccccCCcccccccccccccchHHHHHHHHHhh-ccccccCCCCCCccchhhhhhhhhhccchhhcccCCchhhh
Q 011783 190 GGFLAQPAEKYPNLFSSESLFGKFPYFLPCLCISLFAF-GETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKS 268 (477)
Q Consensus 190 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (477)
+|.+.+..+.+ .++.. .....+..+..+.. |+.++..+.++.+..+ +++...+...+
T Consensus 158 ~G~L~~i~p~~--~fwi~------s~~~~il~lll~~~~~~~~~~~~~~~~~~~~--------------~~~~~~~~~~~ 215 (412)
T PF01306_consen 158 AGILFNINPNI--IFWIA------SAAAIILLLLLLLLKPDVPPQAEVADALGAK--------------KDKVSLKDVLS 215 (412)
T ss_dssp HHHHHHHHHHH--HHHHH------HHHHHHHHHHHHSS---SSSSS-SSTTSSS--------------------HHHHHH
T ss_pred hheeeeeCccH--HHHHH------HHHHHHHHHHHHHcCCcCchhhhhhcccccC--------------CCCCcHHHHHH
Confidence 99998732211 12111 11111111111111 1111111111000000 01111234568
Q ss_pred hhcchhhHHHHHHHHHHHhhhhhhHHHHHHhhcCcccCCccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHH
Q 011783 269 LLKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVA 348 (477)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 348 (477)
++|+|++|...+...........+...++.|..... +..+.+....|.+.+...+..++.-. +.+++.+|+|.|+.+
T Consensus 216 l~k~~~fw~~~l~v~g~~~~Y~vfdqqf~~y~~~~f--~~~~~g~~~~G~l~s~~v~~E~~~m~-~~p~li~rig~k~~L 292 (412)
T PF01306_consen 216 LFKMRNFWFFVLFVIGVAAIYDVFDQQFPIYFASFF--QSAGQGNQMYGYLWSVQVFLEALMMF-FSPWLINRIGAKNLL 292 (412)
T ss_dssp HTTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTS--SSHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHH-HHHHH
T ss_pred HhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh--cccccChhHHhHHHHHHHHHHHHHHH-HHHHHHHhcChHhHH
Confidence 899999999877666665555666655666665422 22456677789999998888888877 899999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhhhhHHHHhHHHHHHhhcCCcchhhHHhHHH-HHHHHHHHHHhh
Q 011783 349 RIAGVLTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIA-MTGMSLFKAAGP 427 (477)
Q Consensus 349 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~-~~~~~~g~~~~~ 427 (477)
.++..++.+=....++.++.. .+...-.+.++-.........-++++.+|++..++...+. +...++|.++.+
T Consensus 293 llag~i~~iRi~~~~~~~~~~------~i~~~klLH~~e~~l~lva~fkYI~~~fd~rlsAt~y~v~~~~~~~~~~~i~s 366 (412)
T PF01306_consen 293 LLAGVIMAIRIIGSGFATNPW------VISLIKLLHALEFPLLLVAAFKYITAHFDKRLSATLYLVGFQFAKQIGIIILS 366 (412)
T ss_dssp HHHHHHHHHHHHHHHT--SHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHS-GGGHHHHHHHHHTTTHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhhcchH------HHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhHHHHHHHHHHHHHHHHHHHHHh
Confidence 999998888888777666522 4566667777777788888888999999999999999986 567899999999
Q ss_pred hHHHHHHHHhhhhccccCCCCchHHHHHHHHHHHHHHHHHhh
Q 011783 428 AGGGALFSWAQKRLDASFLPGSQMVFFVLNVVEAIGVLMTFK 469 (477)
Q Consensus 428 ~~~g~l~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 469 (477)
.++|.++|+. |++.+|++++.+.+...++..+
T Consensus 367 ~~~G~lyd~~----------G~~~tylimg~iv~~~~li~~f 398 (412)
T PF01306_consen 367 PLAGYLYDRI----------GFQHTYLIMGLIVLPFTLISAF 398 (412)
T ss_dssp HHHHHHHHHH----------HHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhHHhhHhhc----------CcHHHHHHHHHHHHHHHHHhee
Confidence 9999999999 8888999999888877777666
No 99
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=99.93 E-value=1.4e-22 Score=192.25 Aligned_cols=411 Identities=15% Similarity=0.151 Sum_probs=260.9
Q ss_pred chhHHHHHHHHHHHhhhchhchHhHHHHHHHHhcccccchhhhhhhHHHHHHHHHHHHHHhhhhhhhhh----hcCCchh
Q 011783 39 PITELFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVAD----RYGRKPV 114 (477)
Q Consensus 39 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~D----r~Grr~~ 114 (477)
|.++++.+....+...+......+.++.+.+++|.+..+ .+++..+..+...+.+|+.|+++| |+||||.
T Consensus 2 ~~~~li~~~~~~~Giq~~~~l~~~~l~~yl~~lg~~~~~------~~~i~~~~~l~~~i~~Pi~G~lSDr~~sr~GRRrp 75 (477)
T TIGR01301 2 PLRKLLRVASVAAGVQFGWALQLSLLTPYVQELGIPHAW------ASIIWLCGPLSGLLVQPLVGYLSDRCTSRFGRRRP 75 (477)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHH------HHHHHHHHHHHHHHHHhHeeehhcCCCCCCCChHH
Confidence 345677777777777888888899999899999999988 999999999999999999999999 5999999
Q ss_pred hHHH-HHHHHHHHHHHHhhhhHHH-----------------HHHHHHHhhhcccchhh-HHHHhhhhccccch--hhHHH
Q 011783 115 IIMG-TASVVIFNTLFGLSVNFWM-----------------AVLTRFLLGSLNGLLGP-IKAYACEIFREEHQ--ALGLS 173 (477)
Q Consensus 115 ~~~~-~~~~~i~~~~~~~~~~~~~-----------------l~~~r~l~G~~~g~~~~-~~~~i~~~~~~~~r--~~~~~ 173 (477)
++++ .+...++.++.+++++... ++++-.+..++.....+ ..++++|.+|+++| +.+.+
T Consensus 76 ~il~g~~~~~~~l~ll~~~~~~~~~~~~~~~~~~~~~~i~~~~i~~~lld~~~n~~~~p~rALiaDl~p~~~~~~~~a~~ 155 (477)
T TIGR01301 76 FIAAGAALVAFAVILIGFAADIGHLFGDNLDKKTKPRAIIVFVVGFWILDVANNMLQGPCRAFLADLTGGDARRTRIANA 155 (477)
T ss_pred HHHHHHHHHHHHHHHHHhCchhhhhccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCchhHHHHHHHH
Confidence 8875 6666677777777666432 22222233345555444 49999999998865 68999
Q ss_pred HHHHHhHHHHHHHHhHHHHhhhcc-ccCC-----cc--cccccccc-cccchHHHHHHHHHhhccccccCCCCCCccchh
Q 011783 174 TVSTAWGIGLIIGPALGGFLAQPA-EKYP-----NL--FSSESLFG-KFPYFLPCLCISLFAFGETLHRHNDDDDSCDVS 244 (477)
Q Consensus 174 ~~~~~~~~g~~~g~~~~~~l~~~~-~~~~-----~~--~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 244 (477)
+.+...++|.++|+.++++..... .++. .. -+.+..|. .....+...+..++..+|.+...+++.++.
T Consensus 156 ~~~~~~~lG~ilg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~F~i~a~~l~i~~l~t~~~v~E~~~~~~~~~~~~--- 232 (477)
T TIGR01301 156 YFSFFMAIGNVLGYAAGAYSGLYKIFPFTKTEACGVSCANLKSCFLIDIILLAILTYIALSAVKENPLIGSDDFINS--- 232 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHhHHHhcccccccccccccchHHHHHHHHHHHHHHHHHHHeeeeeccCCCccccchhh---
Confidence 999999999999999998752110 0000 00 01222231 000111222233334455443211110000
Q ss_pred hhhhhhhhccchhhcccCCchhhhhhc-----chhhHHHHHHHHHHHhhhhhhHHHHHHhhcCcccCCcc----ccchh-
Q 011783 245 YDALESASAEVKEEEGREATPKKSLLK-----NWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGL----NYSTQ- 314 (477)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----g~~~~- 314 (477)
+.++. + +.+.....+++++ .+.++..++..++..+..+.+..+.+.|..+.....+- .++..
T Consensus 233 --~~~~~---~---~~~~~~~~~~i~~~~~~mP~~m~~l~~vqffsW~a~f~~~~y~T~~vg~~v~~~~~~~~~~y~~gv 304 (477)
T TIGR01301 233 --EAAPP---S---KHGEEAFFGELFGAFKYLPRPVWILLLVTCLNWIAWFPFILFDTDWMGREVYGGSVNQGAKYDDGV 304 (477)
T ss_pred --hcccc---c---ccchhhhHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHcCCCCcchhHHHHHH
Confidence 00000 0 0001112233332 35677778888877666666665555554432111100 01000
Q ss_pred -hhHHHHHHHHHHHHHHHHHHHHHHHHhhcc-hhHHHHHHHHHHHHHHHHHHHHHhhh---------------hhHHHHH
Q 011783 315 -MVGEVLAITGFSLLVFQLSLYPFLERILGP-IMVARIAGVLTIPLLTSYPYIAMLSG---------------FGLAFLL 377 (477)
Q Consensus 315 -~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~ 377 (477)
...+....+.+...+.++ +-.++.+|+|+ |+....+.++.++++....+.....+ .......
T Consensus 305 r~G~~~l~~~s~~~~i~s~-~l~~l~~~~g~~k~~~~~s~~~~~~~l~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 383 (477)
T TIGR01301 305 RAGAFGLMLNSVVLGITSI-GMEKLCRGWGAGKRLWGIVNIILAICLAATVLVTYVAKNSRYYDGDGESLPPPTGIKASA 383 (477)
T ss_pred HHHHHHHHHHHHHHHHHHH-HHHHHHHHhccchhHHHHHHHHHHHHHHHHHHHHhhhhccccccccccccCcchhhHHHH
Confidence 022334445555556666 67888999985 67778888888888777765543111 0112344
Q ss_pred HHHHHHHhhhhHHHHhHHHHHHhhcCCc--chhhHHhHHHHHHHHHHHHHhhhHHHHHHHHhhhhccccCCCCchHHHHH
Q 011783 378 NCASVVKNLLSVSIITGLFILQNRAVDQ--DQRGAANGIAMTGMSLFKAAGPAGGGALFSWAQKRLDASFLPGSQMVFFV 455 (477)
Q Consensus 378 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~g~~~~~~~ 455 (477)
++.....|+.....+..-++++++..|+ +..|..+|+.|.+..+.+.+.....|.+.+..++ +....+.+
T Consensus 384 l~~~~~~Gi~~A~~~siPfal~s~~~~~~~~~~G~~mgilN~~I~lpQii~sl~~g~~~~~~g~--------~~~~~~~~ 455 (477)
T TIGR01301 384 LIVFAILGIPLAITYSIPFALASIRSSNLGAGQGLSMGVLNLAIVIPQIIVSLGSGPWDQLFGG--------GNLPAFVV 455 (477)
T ss_pred HHHHHHhhHHHHHHHHHhHHHHHHHccccCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHcCC--------CCeeHHHH
Confidence 4555556788888888899999998884 5669999999999999999999999986666543 24468888
Q ss_pred HHHHHHHHHHHHhhhhhhccC
Q 011783 456 LNVVEAIGVLMTFKPFLAQRH 476 (477)
Q Consensus 456 ~~~~~~~~~~~~~~~~~~~~~ 476 (477)
.++..+++.++..+ .+|+++
T Consensus 456 ~gv~~~~aa~~~~~-~~~~~~ 475 (477)
T TIGR01301 456 GAVAAFVSGLLALI-LLPRPR 475 (477)
T ss_pred HHHHHHHHHHHHHH-hCCCCC
Confidence 88888888887776 566654
No 100
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=99.93 E-value=3.5e-23 Score=190.84 Aligned_cols=387 Identities=12% Similarity=0.030 Sum_probs=236.1
Q ss_pred hhchHhHHHHHHHHhcccccchhhhhhhHHHHHHHHHHHHHHhhhhhhhhhhcCCchhhHHHHHHHHHHHHHHHhhhhHH
Q 011783 57 ISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLSVNFW 136 (477)
Q Consensus 57 ~~~~~~~~~~~~~~~~~s~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~ 136 (477)
+.....+.|++.+|+|++++|. .|.+.++++.+|++++++.|+++||+|.|+++.++.+.+++..++.++++++.
T Consensus 42 R~n~s~a~p~L~~elglT~~qv-----~G~I~s~F~ysYal~qIp~GlLaDrlG~K~vL~l~~l~Wsl~t~L~~fa~Sl~ 116 (511)
T TIGR00806 42 RPGESFITPYLLTVLNFTEETV-----TNEIIPVLPYSHLAVLVPVFLLTDYLRYKPVLVLQALSFVCVWLLLLLGTSVW 116 (511)
T ss_pred hchHHHHHHHHHHHcCCCHHHh-----cchHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4556677889999999998862 69999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhhcccchhhHHHHhhhhccccchhhHHHHHHHHhHHHHHHHHhHHHHhhhccccCCcccccccccccccch
Q 011783 137 MAVLTRFLLGSLNGLLGPIKAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSESLFGKFPYF 216 (477)
Q Consensus 137 ~l~~~r~l~G~~~g~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 216 (477)
.+.+.|++.|++.|...+...++..|+|+++|+++.++...+..+|.++++++++++.. .+||+......+- ...
T Consensus 117 ~L~i~R~llGvaEA~~~A~~syI~~WfP~kER~ratsi~~sg~~vG~~Ia~~L~qll~s--~gWr~y~~Ln~Is---l~s 191 (511)
T TIGR00806 117 HMQLMEVFYSVTMAARIAYSSYIFSLVPPSRYQRAAAYSRAAVLLGVFLSSVLGQLLVT--LGWISYSTLNIIS---LVF 191 (511)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh--cCchhHHHHHHHH---HHH
Confidence 99999999999999988449999999999999999999999999999999999999443 3566544332211 111
Q ss_pred HHHHHHHHHhhcccccc---CCCCCCccchhhhhhhhhhc-----cchhhc-------ccCCchhhhhhcchhhHHHHHH
Q 011783 217 LPCLCISLFAFGETLHR---HNDDDDSCDVSYDALESASA-----EVKEEE-------GREATPKKSLLKNWPLMSSIIV 281 (477)
Q Consensus 217 ~~~~~~~~~~l~~~~~~---~~~~~~~~~~~~~~~~~~~~-----~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~ 281 (477)
..+.++..+++|..++. ++++..+.+.. .+.+.... ..+..+ .......++..+|+.+..-.+-
T Consensus 192 ~~~a~~~a~~LP~~~~sl~f~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~y~n~~vl~WSlW 270 (511)
T TIGR00806 192 MTFSVFLALFLKRPKRSLFFNRLEDVRGALP-CELDQMVPGPGGKLEDYLGTCRDSFLVRMLSELVTIYRNPQLLLWSLW 270 (511)
T ss_pred HHHHHHHHHhCCCCchhhhhccccccccccc-cccccCCCCCccccchhhhhhhhHHHHHHHHHHHHHhcCcchhhhhHH
Confidence 22333444566633321 11110000000 00000000 000000 0011233445667766665555
Q ss_pred HHHHHhhhhhhHHHHHHhhcCcccCCccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHH--HHH
Q 011783 282 YCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTI--PLL 359 (477)
Q Consensus 282 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~--~~~ 359 (477)
+.+..+.+....++....-...... .+.-.|..-++..+.+.+.++ ..|++..++.+...+.++..... ..+
T Consensus 271 wa~a~~g~~qv~~Y~Q~LW~~v~~~-----~~~yNG~veA~~tllga~~a~-~ag~~~~~w~~~~~l~l~v~s~~~~gll 344 (511)
T TIGR00806 271 WVFNSAGYYLITYYVHTLWGTLDES-----LNKYNGAVDAASTLLGAITSF-IAGFVNIRWARWSKLLIAVVSAIQAGLV 344 (511)
T ss_pred HHHHhhHHHHHHHHHHHHHHHcCCC-----ccccCCHHHHHHHHHHHHHHH-HHHhhcCCchhhHHHHHHHHHHHHHHHh
Confidence 5555444444444333322221010 111446666666666777776 77777555544333333333222 222
Q ss_pred HHHHHHHHhhhhhHHHHHHHHHHHHhhhhHHHHhHHHHHHhhcCCcchhhHHhHHHHHHHHHHHHHhhhHHHHHHHHhhh
Q 011783 360 TSYPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIAMTGMSLFKAAGPAGGGALFSWAQK 439 (477)
Q Consensus 360 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~ 439 (477)
+++....+ .| +..+..++.........+....-+++....+.-|.+.|+.+++.-+-+.+-..+ +.|..+-
T Consensus 345 ~~m~~t~~-----Iw-~~Y~~yvlf~~~y~flitia~~~iA~~L~~~~~aLvFGiNtfvAl~LQtilT~i---Vvd~~gl 415 (511)
T TIGR00806 345 FWMSQSHD-----IW-VLYVTYVLFRGIYQFLVPIATFQIASSLSKELCALVFGINTFVATALKTIITAV---VSDKRGL 415 (511)
T ss_pred hhhhcccc-----hH-HHHHHHHHHHHHHHHHHHHHHHHHHHHhcccceEEEEecHHHHHHHHHHheEEE---EEccccc
Confidence 22222222 22 334444444455556666666677777887888999999888877766665554 2222111
Q ss_pred hcc-ccCCCCchHHHHHHHHHHHHHHHHHhh
Q 011783 440 RLD-ASFLPGSQMVFFVLNVVEAIGVLMTFK 469 (477)
Q Consensus 440 ~~~-~~~~~g~~~~~~~~~~~~~~~~~~~~~ 469 (477)
+.+ -..+.-|..-|.+.+++.++..++...
T Consensus 416 ~l~i~~Qf~vY~~yf~~~~~i~~~~~~~~~~ 446 (511)
T TIGR00806 416 GLQVRKQFRIYSVYFLVLSIICFFGAGLDGL 446 (511)
T ss_pred CCCceeEEEehhhHHHHHHHHHHHHHHHHHh
Confidence 000 001113445666666666666555444
No 101
>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=99.92 E-value=4e-25 Score=185.57 Aligned_cols=387 Identities=15% Similarity=0.149 Sum_probs=258.7
Q ss_pred HHHHHHHHHHhhhchhchHhHHHHHHHHhcccccchhhhhhhHHHHHHHHHHHHHHhhhhhhhhhh-cCCchhhHHHHHH
Q 011783 43 LFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADR-YGRKPVIIMGTAS 121 (477)
Q Consensus 43 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~Dr-~Grr~~~~~~~~~ 121 (477)
+...++..|-+++.+........++.+|.+++..+ ..++.++|.....+.+.+.|++.|| +|-|.--++-+..
T Consensus 46 lv~mc~lgfgsyfcyd~p~alq~~fk~d~ni~~ak------ftLlYsvYSwPNvVlcffgGflidr~fgir~gtii~~~f 119 (459)
T KOG4686|consen 46 LVFMCLLGFGSYFCYDAPGALQIDFKLDSNIEYAK------FTLLYSVYSWPNVVLCFFGGFLIDRRFGIRLGTIILCIF 119 (459)
T ss_pred HHHHHHhcccceeecCCchhhhhhhhcccccceee------eeeeeeeccCCCEEEeeecceeehhhhhhhHHHHHHHHH
Confidence 44555666667777778888888899999999988 9999999999999999999999997 6888777776667
Q ss_pred HHHHHHHHH---hhhhHHHHHHHHHHhhhcccchhhH-HHHhhhhccccchhhHHHHHHHHhHHHHHHHHhHHHHhhhcc
Q 011783 122 VVIFNTLFG---LSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPA 197 (477)
Q Consensus 122 ~~i~~~~~~---~~~~~~~l~~~r~l~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~ 197 (477)
..++.++++ ..+.+|.+..+|++.|+|.-...++ +.+..-|+..||.+.++|+......+|..+--.+.+++.+..
T Consensus 120 v~~GqliFa~Ggi~~aFw~M~~GRF~FGIGgESlAVaQN~yav~wFKGKELn~vfGlqlSvAR~GstvNf~lm~~ly~~~ 199 (459)
T KOG4686|consen 120 VFLGQLIFAAGGISHAFWTMLAGRFLFGIGGESLAVAQNKYAVYWFKGKELNFVFGLQLSVARLGSTVNFLLMPFLYDTM 199 (459)
T ss_pred HHHHHHHHHhchHHHHHHHHHhhheeeccCchhhhhhhcceeEEEecCccccchhhHHHHHHHhhceeeeeecHHHHHHH
Confidence 777777665 4689999999999999997777777 999999999999999999999999999988777777776632
Q ss_pred ccCCcccccc--cccccccchHH-HHHHHHHhhccccccCCCCCCccchhhhhhhhhhccchhhcccCCchhhhhhcchh
Q 011783 198 EKYPNLFSSE--SLFGKFPYFLP-CLCISLFAFGETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKSLLKNWP 274 (477)
Q Consensus 198 ~~~~~~~~~~--~~~~~~~~~~~-~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 274 (477)
.. .++-. ...+.+.+... .....+... .+.... ++..++. ++.++... .+.++..-.+-+ .|.
T Consensus 200 ~~---~~~~~ghT~LG~~l~~~~~tc~~slica-l~lg~~---D~rAeri---lh~e~g~~---Ge~pkLtdv~~f-~pp 265 (459)
T KOG4686|consen 200 GR---MFPGVGHTLLGLWLCFEVKTCKQSLICA-LSLGLS---DDRAERI---LHLEEGFL---GEEPKLTDVNTF-YPP 265 (459)
T ss_pred HH---hcccchHHHHHHHHHHHHHHHHHHHHHH-HHhhhh---hhHHHHH---HhhhcCcc---cCCccccccccc-Ccc
Confidence 11 11100 00000000000 000000000 000000 0111110 00000000 000111111112 477
Q ss_pred hHHHHHHHHHHHhhhhhhHHHHHHhhcCcccCCccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHH
Q 011783 275 LMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVL 354 (477)
Q Consensus 275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 354 (477)
+|...+..+++....+.+...-+.+.++ ++|+|+..++.+.+.......+.++ +.+.++|+.|++...+....+
T Consensus 266 fw~~~iicv~yyva~fPFi~lg~~fF~~-----rfGlS~~~a~~i~s~vy~Isav~sp-vfg~i~Dk~G~n~~wv~~a~~ 339 (459)
T KOG4686|consen 266 FWVLVIICVLYYVAWFPFITLGPMFFQK-----RFGLSAVSAGNILSTVYGISAVLSP-VFGAISDKYGFNLWWVASACI 339 (459)
T ss_pred HHHHHHHHHHHHHHHHHHhhhhHHHHHH-----hhCCChhhccchhhhhhhhhhhhhh-hHHHhHhhhcceehhHHHHHH
Confidence 8988888888888777777777766654 4999999999999888888888888 889999999988776655444
Q ss_pred HHHH-HHHHHHHHHhhhhhHHHHHHHHHHHHhhhhHHHHhHHHHHHhhcCCcchhhHHhHHHHHHHHHHHHHhhhHHHHH
Q 011783 355 TIPL-LTSYPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIAMTGMSLFKAAGPAGGGAL 433 (477)
Q Consensus 355 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l 433 (477)
..+. -..+.+... ++ + ....+.|..........+..++..+|+++.|++.|.++.+.++|-++.|.++|.+
T Consensus 340 ~tl~~H~~l~Ft~l--sP--y----~~m~~lGLsysllAcslWP~va~~vpE~qLGTaygf~qsIqNLgla~i~Iiag~i 411 (459)
T KOG4686|consen 340 LTLLGHSGLFFTFL--SP--Y----TSMTFLGLSYSLLACSLWPCVASLVPEEQLGTAYGFIQSIQNLGLAFIPIIAGFI 411 (459)
T ss_pred HHHHHhhhHHhhhc--cH--H----HHHHHHhhhHHHHHHHHhhhhhhhCCHHHhcchHHHHHHHHhhhhhHHhhhhhee
Confidence 3333 333322221 11 1 1222223344444555667788889999999999999999999999999999999
Q ss_pred HHHhhhhccccCCCCchHHHHHHHHHHHHHHHHHhh
Q 011783 434 FSWAQKRLDASFLPGSQMVFFVLNVVEAIGVLMTFK 469 (477)
Q Consensus 434 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 469 (477)
.|..+.+. ..+..|+..+.+++....+.+.
T Consensus 412 ~d~~g~y~------~le~ffl~~~~~aL~svgil~~ 441 (459)
T KOG4686|consen 412 ADGDGSYD------NLEAFFLIIGLMALTSVGILFY 441 (459)
T ss_pred ecCCCchh------hHHHHHHHHHHHHHHHHHHHhh
Confidence 98874432 3455666666666666655544
No 102
>PTZ00207 hypothetical protein; Provisional
Probab=99.92 E-value=5.6e-22 Score=191.96 Aligned_cols=382 Identities=10% Similarity=0.053 Sum_probs=244.6
Q ss_pred hchHhHHHHHHHHhcccccchhhhhhhHHHHHHHHHHHHHHhhhhhhhhhhcCCchhhHHHHHHHHHHHHHHHhh-----
Q 011783 58 SSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLS----- 132 (477)
Q Consensus 58 ~~~~~~~~~~~~~~~~s~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~Grr~~~~~~~~~~~i~~~~~~~~----- 132 (477)
+.++...|.+.+++|.+..+ .+++.++. .....++++.|+++||+|||+++.++.++++++.++++++
T Consensus 44 y~fsv~s~~L~~~lgls~~~------l~~i~svg-~~~g~~~lp~G~L~Dr~G~R~vllig~ll~~iG~ll~ala~~~~i 116 (591)
T PTZ00207 44 YAFNLISGAMQARYNLTQRD------LSTITTVG-IAVGYFLLPYSFIYDYLGPRPIFVLSMTVFCLGTLLFALTFQEVI 116 (591)
T ss_pred HHHHHHHHHHHHHhCcCHHH------HHHHHHHH-HHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHhcccc
Confidence 45556778999999999999 89988774 4556788899999999999999999999999999999987
Q ss_pred -hhHHHHHHHHHHhhhcccchhhH-HHHhhhhccccchhhHHHHHHHHhHHHHHH-HHhHHHHhhhccccCCcccccccc
Q 011783 133 -VNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLII-GPALGGFLAQPAEKYPNLFSSESL 209 (477)
Q Consensus 133 -~~~~~l~~~r~l~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~-g~~~~~~l~~~~~~~~~~~~~~~~ 209 (477)
++++.+.+.|++.|++.+...+. ...+.+++| ++||++.|+.....++|..+ +++..+++.+ +|++.+..-++
T Consensus 117 ~~s~~~l~l~r~l~G~G~~~~~~~~~~~i~~~Fp-~~RG~a~Gi~~~~~gLGsaI~~~l~~~l~~~---~~~~~fl~l~v 192 (591)
T PTZ00207 117 EGSVVRLSVYNGLMTLGCMLFDLGAVVTVLSVFP-SNRGAVVAIMKTFTGLGSAILGSIQLAFFSD---NTSAYFFFLMS 192 (591)
T ss_pred cCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCh-hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHH---hHHHHHHHHHH
Confidence 68999999999999998887776 888899997 78999999999999999975 5555554432 23322221111
Q ss_pred cccccchHHHHHHHHHhhcccc--cc--CCCCCCccchh-----------------h---------------------h-
Q 011783 210 FGKFPYFLPCLCISLFAFGETL--HR--HNDDDDSCDVS-----------------Y---------------------D- 246 (477)
Q Consensus 210 ~~~~~~~~~~~~~~~~~l~~~~--~~--~~~~~~~~~~~-----------------~---------------------~- 246 (477)
...+..++....+.+.+ .+ ++.+.++.+.. . +
T Consensus 193 -----l~~vv~ll~~~~vr~p~~~~~~~~~~~~~~~~~~~~~~~~~~y~~q~~p~~~f~~~~~i~~~l~~yl~~~~~~~~ 267 (591)
T PTZ00207 193 -----FALVVGILAIVFMRLPPFHLTGYQEKHLDEEEKAQRLMRKGVYLKQKAPMWRFVYGFVILIILIVFLPLQGALVA 267 (591)
T ss_pred -----HHHHHHHHHHhheeCCcchhhcccccCCCHHHHHHHhhhhhhhhhcCCCceehhhHHHHHHHHHHHHHHHHHHHH
Confidence 11111222222222221 11 11000111110 0 0
Q ss_pred ---------------hh----------------h----hhhcc--c-------------h--------h-hcccCCchhh
Q 011783 247 ---------------AL----------------E----SASAE--V-------------K--------E-EEGREATPKK 267 (477)
Q Consensus 247 ---------------~~----------------~----~~~~~--~-------------~--------~-~~~~~~~~~~ 267 (477)
.. + ++..+ . + + ...+...+.+
T Consensus 268 ~~~~~~~~~~~~~~v~~~lll~~p~l~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~t~~ 347 (591)
T PTZ00207 268 YLKLGSNFKVGFAVTVIVLTVIFPFMAFPLTTFDGKRPHDDSDGKAKEHVEAGEEVSAAEDKVVETDVDYIAPQFQETFI 347 (591)
T ss_pred HhcccHHHHHHHHHHHHHHHHHHHHHhhhHHHhccCCcCCCccccccccccccccccccccccccccccCCCCCCcchHH
Confidence 00 0 00000 0 0 0 0011112666
Q ss_pred hhhcchhhHHHHHHHHHHHhhhhhhHHHHHHhhcCcccCCcc-ccch-hh-hHHHHHHHHHHHHHHHHHHHHHHH----H
Q 011783 268 SLLKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGL-NYST-QM-VGEVLAITGFSLLVFQLSLYPFLE----R 340 (477)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-g~~~-~~-~g~~~~~~~~~~~~~~~~~~~~l~----~ 340 (477)
+.+++..+|.+...+++.................. + |.+. .+ ...+.++.++.+.+|++ ..+.++ +
T Consensus 348 q~l~~~d~Wll~~~~~cg~g~gl~~~~N~~qI~~s------l~g~~~~~~~~~~~vsL~si~~~~GRl-~~g~~~~~~~~ 420 (591)
T PTZ00207 348 EGLKTARLWCLLWSIFCCVGAHFVIIFNARFIYTA------LAGEAPDDALNTLLTVLNGVGSAVGRL-CMSYFEIWSQK 420 (591)
T ss_pred HHHhchhHHHHHHHHHHhhCchheeeecHHHHHHH------hcCCCCCccceeeehhhhhHHHHhhHH-HHHHHHHHHHh
Confidence 77888899998888888766555554444433332 4 4422 21 22267788888888887 777766 2
Q ss_pred hhc----chhHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhhhhHHHHhHHHHHHhhcCCcchhhHHhHHHH
Q 011783 341 ILG----PIMVARIAGVLTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIAM 416 (477)
Q Consensus 341 ~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~ 416 (477)
|.. +|........++.++.+++.+... ...+.+..++.+++.+..++.....++|++. ++-|+-+-+..
T Consensus 421 ~~~~~r~prt~~l~~~~~~~~~~lll~~~~p------~~~L~~~~~lvg~~~G~~~~~~~~i~selFg-k~~g~~yN~~~ 493 (591)
T PTZ00207 421 RRAEDRVPITIALFIPSVCIITMLTLFLTLP------KAALPLPYFIAAFANGFMAATIALVTRTIFA-KDPAKHYNFCF 493 (591)
T ss_pred hccccccchhHHHHHHHHHHHHHHHHHHHCC------ccHhHHHHHHHHHHhhHhHHHHHHHHHHHhc-cchHHHhhHHh
Confidence 221 112222222223333333333221 1246666677778889999999999999999 88999888888
Q ss_pred HHHHHHHHHh-hhHHHHHHHHhhhhccccCCCC---chHHHHHHHHHHHHHHHHHhh
Q 011783 417 TGMSLFKAAG-PAGGGALFSWAQKRLDASFLPG---SQMVFFVLNVVEAIGVLMTFK 469 (477)
Q Consensus 417 ~~~~~g~~~~-~~~~g~l~~~~~~~~~~~~~~g---~~~~~~~~~~~~~~~~~~~~~ 469 (477)
...-+|..+- -.++|.++|.-..........| ++.+|++++++++++.+....
T Consensus 494 ~a~pigs~~~n~~l~G~~Yd~ea~k~~~~~C~G~~C~~~~~~v~~~~~~~g~~~s~~ 550 (591)
T PTZ00207 494 LGSVLSAIFLNRLLYGEWYTQQADKLGQDVCTERVCVVMPLAFLLGLSFLAFITSTY 550 (591)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhCCCCeeCCceeeHhHHHHHHHHHHHHHHHHhh
Confidence 8888888776 6788999987654332211112 678999999999999887655
No 103
>PRK09669 putative symporter YagG; Provisional
Probab=99.91 E-value=1.3e-21 Score=189.49 Aligned_cols=364 Identities=16% Similarity=0.045 Sum_probs=224.6
Q ss_pred chhHHHHHHHHHHHhhhchhchHhHH-HHHHHHhcccccchhhhhhhHHHHHHHHHHHHHHhhhhhhhhhh----cCCch
Q 011783 39 PITELFSIWIIVLCTALPISSLFPFL-YFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADR----YGRKP 113 (477)
Q Consensus 39 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~s~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~Dr----~Grr~ 113 (477)
++++.+.-.++.+...+....+...+ +++.+++|++..+ +|.+.++..+..++..|+.|+++|| +||||
T Consensus 7 ~~~~~~~yg~g~~~~~~~~~~~~~~l~~~~t~~~gls~~~------~g~i~~i~~i~dai~dp~~G~lsD~~~~r~Grrr 80 (444)
T PRK09669 7 TTKDKIGYGLGDTACNLVWQTVMLFLAYFYTDVFGLSAAI------MGTMFLVVRVLDAVTDPLMGALVDRTRTRHGQFR 80 (444)
T ss_pred cHHHHHhhcchhhhhhHHHHHHHHHHHHHHHHhcCCCHHH------HHHHHHHHHHHHHcccceeeEeeecCCCCCCCcc
Confidence 34444444444444444444444444 4778889999999 9999999999999999999999998 78754
Q ss_pred -hhHHHHHHHHHHHHHHHhhh------hHHHHHHHHHHhhhcccchhhH-HHHhhhhc-cccchhhHHHHHHHHhHHHHH
Q 011783 114 -VIIMGTASVVIFNTLFGLSV------NFWMAVLTRFLLGSLNGLLGPI-KAYACEIF-REEHQALGLSTVSTAWGIGLI 184 (477)
Q Consensus 114 -~~~~~~~~~~i~~~~~~~~~------~~~~l~~~r~l~G~~~g~~~~~-~~~i~~~~-~~~~r~~~~~~~~~~~~~g~~ 184 (477)
.++.+.+..++..++....+ .+.++++...+.+.+.....+. .++.+|+. +++||.+..++......+|..
T Consensus 81 p~il~~~~~~~i~~~l~f~~p~~~~~~~~~~~~~~~~l~~~~~t~~~ip~~al~~~~t~~~~eR~~l~~~r~~~~~~G~~ 160 (444)
T PRK09669 81 PYLLWFAIPFGVVCLLTFYTPDFGATGKIIYACVTYILLSLVYTAINVPYCAMPGAITNDPRERHSLQSWRFALSFIGGL 160 (444)
T ss_pred hhHHHHHHHHHHHHHHHHhCCCCCcchHHHHHHHHHHHHHHHHHhhcchHHHhHHHhcCCHHHHHHHHHHHHHHHHHHHH
Confidence 56567777777766554443 2566666776777665554444 88999988 568899999998888888888
Q ss_pred HHHhHHHHhhhccccCCcccccccccccccchHHHHHHHHHhhccccccCCCCCCccchhhhhhhhhhccchhhcccCCc
Q 011783 185 IGPALGGFLAQPAEKYPNLFSSESLFGKFPYFLPCLCISLFAFGETLHRHNDDDDSCDVSYDALESASAEVKEEEGREAT 264 (477)
Q Consensus 185 ~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (477)
+++.+...+.....+.....+|+..+.. +.+...+..+.....++++.+++ ++ + +.+...
T Consensus 161 i~~~~~~pl~~~~~~~~~~~g~~~~~~i--~~ii~~v~~~~~~~~~~e~~~~~-~~-~----------------~~~~~~ 220 (444)
T PRK09669 161 IVSVIALPLVDILGKGDEQKGYFYAMMV--MGLLGVVLFFCCFFMTKERYTPE-VD-N----------------SSSVWK 220 (444)
T ss_pred HHHHHHHHHHHHhCCCchhhhHHHHHHH--HHHHHHHHHHHHhCCeEEecCCC-Cc-C----------------CCCHHH
Confidence 8877665554422111112344333200 01111111111111111110000 00 0 111234
Q ss_pred hhhhhhcchhhHHHHHHHHHHHhhhhhhHHHHHHhhcCcccCCccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Q 011783 265 PKKSLLKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGP 344 (477)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~ 344 (477)
..+.++|||.++..+...++.............+|..+. .+ ++...+.+.....+..+++.+ +.+++.||+|+
T Consensus 221 ~~~~~~~n~~~~~l~~~~~~~~~~~~~~~~~~~y~~~~~-----~~-~~~~~~~~~~~~~i~~ii~~~-~~~~l~~r~gk 293 (444)
T PRK09669 221 DLKLLLGNSQWRIMFIFNVVLLTAVVTRGGATLYYVNYV-----LL-RPDLATLFLVTGMIAGLFGAL-LSERLLGKFDR 293 (444)
T ss_pred HHHHHhCCchHHHHHHHHHHHHHHHHHHhhhhheeeeee-----cC-CHHHHHHHHHHHHHHHHHHHH-HHHHHHHHhCh
Confidence 567888999988887776665544444334333332221 22 233334444444566666655 78899999999
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhhhhHHHHhHHHHHHhhcCC-------cchhhHHhHHHHH
Q 011783 345 IMVARIAGVLTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVD-------QDQRGAANGIAMT 417 (477)
Q Consensus 345 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~g~~~g~~~~ 417 (477)
|+....+..+..+....+.+... .+ ...+.+...+.+++.+...+...++.+|.+| ++..|...|..+.
T Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~-~~---~~~~~~~~~i~g~~~~~~~~~~~am~ad~~d~~e~~~G~r~~g~~~s~~~~ 369 (444)
T PRK09669 294 VRAFKWTIVAFVILSALIFFIPP-SN---VWLIFALNILFNFIQNLTTPLQWSMFSDVVDYEEKRSGRRLDGLVFSTNLF 369 (444)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCc-ch---HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhcCcCcchHHHHHHHH
Confidence 99988877655543332222211 11 1122333445567777888888899988775 3345677899999
Q ss_pred HHHHHHHHhhhHHHHHHHHhhh
Q 011783 418 GMSLFKAAGPAGGGALFSWAQK 439 (477)
Q Consensus 418 ~~~~g~~~~~~~~g~l~~~~~~ 439 (477)
...+|.++|+.+.|.+++..+-
T Consensus 370 ~~klg~alg~~i~g~ll~~~Gy 391 (444)
T PRK09669 370 AIKLGLAIGGAVVGWILAWVDY 391 (444)
T ss_pred HHHHHHHHHHHHHHHHHHHcCC
Confidence 9999999999999999998744
No 104
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=99.91 E-value=1.3e-20 Score=179.57 Aligned_cols=404 Identities=13% Similarity=0.086 Sum_probs=231.9
Q ss_pred hhHHHHHHHHHHHhhhchhchHhHHHH-HHHHhcccccchhhhhhhHHHHHHHHHHHHHHhhhhhhhhhhc-CCchhhHH
Q 011783 40 ITELFSIWIIVLCTALPISSLFPFLYF-MIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRY-GRKPVIIM 117 (477)
Q Consensus 40 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~s~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~-Grr~~~~~ 117 (477)
.+.+..++...+...+..+.....+|. +.+++|.++.+ .+.+.+.+.....++++++|+++||+ ||||++++
T Consensus 8 p~~l~~l~~~~~~e~fs~Yg~~~~L~~yL~~~lgls~~~------a~~i~~~~~~~~~l~~ligG~LaDRilGrrr~ili 81 (493)
T PRK15462 8 PRAIYYVVALQIWEYFSFYGMRALLILYLTNQLKYDDNH------AYELFSAYCSLVYVTPILGGFLADKVLGNRMAVML 81 (493)
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHccCcHHHHHH
Confidence 356777777888888888888888884 56678999999 99999999999999999999999999 99999999
Q ss_pred HHHHHHHHHHHHHhhh-hHHHHHHHHHHhhhcccchhhH-HHHhhhhcccc--chhhHHHHHHHHhHHHHHHHHhHHHHh
Q 011783 118 GTASVVIFNTLFGLSV-NFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREE--HQALGLSTVSTAWGIGLIIGPALGGFL 193 (477)
Q Consensus 118 ~~~~~~i~~~~~~~~~-~~~~l~~~r~l~G~~~g~~~~~-~~~i~~~~~~~--~r~~~~~~~~~~~~~g~~~g~~~~~~l 193 (477)
+.++..++.++.+..+ +...+.+...+.+++.|...+. .++++|.+|++ +|..++++.+...++|..++|.+.+++
T Consensus 82 G~il~~lg~lll~~~~~~~~~~~l~l~li~iG~G~~~~~~~alv~elfp~~~~~R~sgf~i~Y~~~nlG~~iap~l~g~L 161 (493)
T PRK15462 82 GALLMAIGHVVLGASEIHPSFLYLSLAIIVCGYGLFKSNVSCLLGELYEPTDPRRDGGFSLMYAAGNVGSIIAPIACGYA 161 (493)
T ss_pred HHHHHHHHHHHHHHhhcchhHHHHHHHHHHHhcccccccHHHHHHHHCCCCCccccceehHHHHHHHHHHHHHHHHHHHH
Confidence 9999999987776543 2233444444555667776676 88999999875 799999999999999999999999999
Q ss_pred hhccccCCcccccccccccccchHHHHHHHHHhhccccccCCC-CCCccchhhhh----------------hhhhh-ccc
Q 011783 194 AQPAEKYPNLFSSESLFGKFPYFLPCLCISLFAFGETLHRHND-DDDSCDVSYDA----------------LESAS-AEV 255 (477)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~-~~~~~~~~~~~----------------~~~~~-~~~ 255 (477)
.+ .++|+..|..........++..+...+...+... ++++.++.... ..... .+.
T Consensus 162 ~~-------~~Gw~~~F~iaaigm~l~li~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (493)
T PRK15462 162 QE-------EYSWAMGFGLAAVGMIAGLVIFLCGNRHFTHTRGVNKKVLRATNFLLPNWGWLLVLLVATPALITVLFWKE 234 (493)
T ss_pred Hh-------hhChHHHHHHHHHHHHHHHHHHHHhhhhhccCCCCCCCCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 87 4556655521111111111111111111111100 01111000000 00000 000
Q ss_pred h-h---------------hcccCCchhhhhhcchh--hHHHHHHHHHHHhhhhhhHHHHHHhhcCcccCCccccchhhhH
Q 011783 256 K-E---------------EEGREATPKKSLLKNWP--LMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVG 317 (477)
Q Consensus 256 ~-~---------------~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g 317 (477)
. . .....+.+.. -|+|- +....+...++...+....+.+..|..+....+-.|++ ...+
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~--er~r~~~~~~l~~~~~~Fw~~~~Q~~~sl~lfa~~~vd~~~~g~~-ip~~ 311 (493)
T PRK15462 235 WSVYALIVATIIGLGVLAKIYRKAENQK--QRKELGLIVTLTFFSMLFWAFAQQGGSSISLYIDRFVNRDMFGYT-VPTA 311 (493)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCHH--HHhhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhccchhccee-eCHH
Confidence 0 0 0000000000 01111 11122222222222233333344444432111112332 2245
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhh-c-ch---h--HHHHHHHHHHHHHHHHHHHHHhh---hhhHHHHHHHHHHHHhhh
Q 011783 318 EVLAITGFSLLVFQLSLYPFLERIL-G-PI---M--VARIAGVLTIPLLTSYPYIAMLS---GFGLAFLLNCASVVKNLL 387 (477)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~l~~~~-~-~~---~--~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~ 387 (477)
...+++.+..++.++++ .++=.|. + +| . =..+|+++.+++++.+....... .......++...++.+.+
T Consensus 312 ~~qslNp~~ii~l~P~~-a~lw~~l~~~~~~~s~~~Kfa~g~~~~g~~f~~l~~~~~~~~~~~~~s~~wl~~~~~~~t~g 390 (493)
T PRK15462 312 MFQSINAFAVMLCGVFL-AWVVKESVAGNRTVRIWGKFALGLGLMSAGFCILTLSARWSAMYGHSSLPLMVLGLAVMGFA 390 (493)
T ss_pred HHHhHhHHHHHHHHHHH-HHHHHHHhcCCCCCCcHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCcCHHHHHHHHHHHHHH
Confidence 66677777777776633 3332222 1 11 1 24567777777766665433221 112333456666667889
Q ss_pred hHHHHhHHHHHHhhcCCcchhhHHhHHHHHHHHHHHHHhhhHHHHHHHHhhhhccc------cCCCCchHHHHHHHHHHH
Q 011783 388 SVSIITGLFILQNRAVDQDQRGAANGIAMTGMSLFKAAGPAGGGALFSWAQKRLDA------SFLPGSQMVFFVLNVVEA 461 (477)
Q Consensus 388 ~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~------~~~~g~~~~~~~~~~~~~ 461 (477)
.....|...+++++..|++.+|..+|+..... .++++.++|.+.+........ .....+...|...+...+
T Consensus 391 El~~sPvgls~~~~laP~~~~g~~mg~w~l~~---~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~ 467 (493)
T PRK15462 391 ELFIDPVAMSQITRIEIPGVTGVLTGIYMLLS---GAIANYLAGVIADQTSQASFDASGAINYSINAYIEVFDQITWGAL 467 (493)
T ss_pred HHHHChHHHHHHHHhChHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHhccccCCccccccchhhhHHHHHHHHHHHHH
Confidence 99999999999999999999999999984422 234455555555443211000 001135566766665554
Q ss_pred HH
Q 011783 462 IG 463 (477)
Q Consensus 462 ~~ 463 (477)
+.
T Consensus 468 ~~ 469 (493)
T PRK15462 468 AC 469 (493)
T ss_pred HH
Confidence 44
No 105
>PRK10429 melibiose:sodium symporter; Provisional
Probab=99.91 E-value=3.8e-21 Score=187.33 Aligned_cols=366 Identities=11% Similarity=0.060 Sum_probs=229.3
Q ss_pred HHHHHHHHHHHhhhchhchHhHHH-HHHHHhcccccchhhhhhhHHHHHHHHHHHHHHhhhhhhhhh----hcCC-chhh
Q 011783 42 ELFSIWIIVLCTALPISSLFPFLY-FMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVAD----RYGR-KPVI 115 (477)
Q Consensus 42 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~s~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~D----r~Gr-r~~~ 115 (477)
..+.-.++.+...+..+.+.+.++ ++.+.+|++... +|.+..+.-+.-++..|+.|+++| |+|| |+.+
T Consensus 7 ~~~~yg~g~~~~~~~~~~~~~~l~~yyt~v~Gls~~~------vg~i~~i~ri~dai~dp~~G~lsD~t~sr~Grrrp~i 80 (473)
T PRK10429 7 TKLSYGFGAFGKDFAIGIVYMYLMYYYTDVVGLSVGL------VGTLFLVARIWDAINDPIMGWIVNNTRSRWGKFKPWI 80 (473)
T ss_pred HHHhhccchhHHhHHHHHHHHHHHHHHHHhcCCCHHH------HHHHHHHHHHHHHHhhchheeehhcCCCCCCCcchhH
Confidence 333444555556666667777666 666678999999 999999999999999999999999 6699 5566
Q ss_pred HHHHHHHHHHHHHHHhhh------hHHHHHHHHHHhhhcccchhhH-HHHhhhhc-cccchhhHHHHHHHHhHHHHHHHH
Q 011783 116 IMGTASVVIFNTLFGLSV------NFWMAVLTRFLLGSLNGLLGPI-KAYACEIF-REEHQALGLSTVSTAWGIGLIIGP 187 (477)
Q Consensus 116 ~~~~~~~~i~~~~~~~~~------~~~~l~~~r~l~G~~~g~~~~~-~~~i~~~~-~~~~r~~~~~~~~~~~~~g~~~g~ 187 (477)
+++.+..+++.+++...+ .+..+++...+.+++.....+. .++.+|.. +++||.+..++-....++|..+.+
T Consensus 81 l~g~i~~~i~~~llf~~p~~~~~~~~~~~~~~~~l~~~~~t~~~ip~~al~~~lt~~~~eR~~l~~~~~~~~~ig~~~~~ 160 (473)
T PRK10429 81 LIGTLANSVVLFLLFSAHLFEGTAQYVFVCVTYILWGMTYTIMDIPFWSLVPTLTLDKREREQLVPYPRFFASLAGFVTA 160 (473)
T ss_pred hhhhHHHHHHHHHHHcCCCCCccHHHHHHHHHHHHHHHHHHHHcchHHhhhHHhCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 678888777766654432 2445666666777776666555 88999999 589999999987777777766666
Q ss_pred hHHHHhhhccccCCcccccccccccccchHHHHHHHHHh---hccccccCCCCCCccchhhhhhhhhhccchhhcccCCc
Q 011783 188 ALGGFLAQPAEKYPNLFSSESLFGKFPYFLPCLCISLFA---FGETLHRHNDDDDSCDVSYDALESASAEVKEEEGREAT 264 (477)
Q Consensus 188 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (477)
.+...+.....+.....+|+.... .+.+...+..+.. .+|.+.....+.++. ++.+.++
T Consensus 161 ~~~~~~~~~~g~~~~~~g~~~~~~--i~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~----------------~~~~~~~ 222 (473)
T PRK10429 161 GFTLPFVNYVGGGDRGFGFQMFTL--VLIAFFIVSTIITLRNVHEVYSSDNQVSAEG----------------SHLTLKD 222 (473)
T ss_pred HHHHHHHHHhCCCchhhhHHHHHH--HHHHHHHHHHHHHHcCceecCCccccccccc----------------cCCCHHH
Confidence 555444321111111112222210 0011111111111 222211000000000 0112233
Q ss_pred hhhhhhcchhhHHHHHHHHHHHhhhhhhHHHHHHhhcCcccCCccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Q 011783 265 PKKSLLKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGP 344 (477)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~ 344 (477)
..+.+++||.++..+...++..........+.++|.... .+ +....+.+.....++.+++.+ +.+++.||+|+
T Consensus 223 ~~~~~~~n~~~~~ll~~~~~~~~~~~~~~~~~~y~~~y~-----~~-~~~~~~~~~~~~~i~~ii~~~-~~~~l~~r~gk 295 (473)
T PRK10429 223 IVALIYKNDQLSCLLGMALAYNIASNIINGFAIYYFTYV-----IG-DADLFPYYLSYAGAANLVTLI-LFPRLVKSLSR 295 (473)
T ss_pred HHHHHhcCHHHHHHHHHHHHHHHHHHHHhhheeeEEEEE-----CC-CHHHHHHHHHHHHHHHHHHHH-HHHHHHHHcCc
Confidence 456677899988887777776655555555544343321 22 345566677766677888877 78999999999
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhhhhHHHHhHHHHHHhhcCC-------cchhhHHhHHHHH
Q 011783 345 IMVARIAGVLTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVD-------QDQRGAANGIAMT 417 (477)
Q Consensus 345 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~g~~~g~~~~ 417 (477)
|+.+..+..+..++.+.+......... ....+.+...+.+++.+...+...++.+|.+| .+..|..+|..+.
T Consensus 296 k~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~i~~~l~g~~~~~~~~~~~am~ad~id~~e~~tG~R~~G~~~s~~~~ 374 (473)
T PRK10429 296 RILWAGASIFPVLSCGVLLLMGLAAPH-NALLIVIAGILLNIGTALFWVLQVIMVADTVDYGEYKLGIRCESIAYSVQTM 374 (473)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhccCch-hHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhHhcCccchhHHHHHHHH
Confidence 999988877666554443322111111 11123333444556667777777888888866 3445668999999
Q ss_pred HHHHHHHHhhhHHHHHHHHhhh
Q 011783 418 GMSLFKAAGPAGGGALFSWAQK 439 (477)
Q Consensus 418 ~~~~g~~~~~~~~g~l~~~~~~ 439 (477)
...++..+++.+.|.+++..+-
T Consensus 375 ~~K~~~al~~~i~g~~l~~~Gy 396 (473)
T PRK10429 375 VVKGGSAFAAFFIGVVLGLIGY 396 (473)
T ss_pred HHHHHHHHHHHHHHHHHHHcCC
Confidence 9999999999999999987643
No 106
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=99.90 E-value=4.4e-22 Score=192.49 Aligned_cols=374 Identities=13% Similarity=0.028 Sum_probs=238.4
Q ss_pred hhHHHHHHHHHHHhhhchhchH-hHHHHHHHHhcccccchhhhhhhHHHHHHHHHHHHHHhhhhhhhhhhcC-----Cch
Q 011783 40 ITELFSIWIIVLCTALPISSLF-PFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYG-----RKP 113 (477)
Q Consensus 40 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~s~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~G-----rr~ 113 (477)
...+.++...++..++. +... ...|.+.+++|++.++ ++...+...+...+-.+ +|+++||++ ||+
T Consensus 25 ~~~~~~~~~~y~~qGl~-~l~~~~~~~~l~~~lg~s~~~------i~~~~sl~~lpw~~K~l-~g~l~D~~~i~G~rRr~ 96 (468)
T TIGR00788 25 RVVLAIGLQVLFVKGIA-GLMRLPLSPMLTDDLGLDGAR------YQRLVGLSSLGWALKPF-AGVMSDTFPLFGYTKRW 96 (468)
T ss_pred chHHHHHHHHHHHhhHH-HHhhhhhhHHHHHhcCCCHHH------HHHHHHHHHHHHHHHHH-HHHHHHhcCCCCccchH
Confidence 34455666677888887 5444 4455777789999999 99999999999998655 999999998 788
Q ss_pred hhHHHHHHHH-HHHHHHHhhhhHHHHH-HHHHHhhhcccchhhH-HHHhhhhccccchhhH---HHHHHHHhHHHHHHHH
Q 011783 114 VIIMGTASVV-IFNTLFGLSVNFWMAV-LTRFLLGSLNGLLGPI-KAYACEIFREEHQALG---LSTVSTAWGIGLIIGP 187 (477)
Q Consensus 114 ~~~~~~~~~~-i~~~~~~~~~~~~~l~-~~r~l~G~~~g~~~~~-~~~i~~~~~~~~r~~~---~~~~~~~~~~g~~~g~ 187 (477)
.++++.++.+ +.....+..++..... +..++.+++.+...++ .++..|..+ |++... .+......++|.++|+
T Consensus 97 ~l~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~a~~dv~~da~~~e~~~-~~~~~~~~~~s~~~~~~~~G~~vg~ 175 (468)
T TIGR00788 97 YLVLSGLLGSAILYGLLPGKVSSAKVAAAFIFLAALAKALYDVLVDSLYSERIR-ESPSAGPSLVSWMWGASATGGLISS 175 (468)
T ss_pred HHHHHHHHHHHHHHHhcccccchHHHHHHHHHHHHHHHHHHHHhHHHHHhhhhh-cCCCcCCCeeeHHHHHHHHHHHHHH
Confidence 8888877763 4434444445544444 4788999998888777 999999998 555443 3334444568999999
Q ss_pred hHHHHhhhccccCCcccccccccccccchHHHHHHHHHhhccccccCCCCCCccchhhhhhhhhhccchhhcccCCchhh
Q 011783 188 ALGGFLAQPAEKYPNLFSSESLFGKFPYFLPCLCISLFAFGETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKK 267 (477)
Q Consensus 188 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (477)
.++|.+.+ .++|+..|...............+++|.+.....+.++.+..... .......+...+.....+
T Consensus 176 ~l~G~l~~-------~~~~~~~f~~~a~l~ll~~~~~~~~~E~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~l~ 246 (468)
T TIGR00788 176 LLGGPLLD-------KTLTRILFLITAALLLLQLFVSNLSKERRAFVRPRIGTYLEMNMA--LLTLGVLANVKVQILGLR 246 (468)
T ss_pred HHHHHHHH-------hcCcchHHHHHHHHHHHHHHHHHhcccccccccccccccchhhhh--hhhhhHHHHHHHHHHHHH
Confidence 99999987 455665552111112222223345556431111110000000000 000000000011122345
Q ss_pred hhhcchhhHHHHHHHHH-HHhhhhhhHHHHHHhhcCcccCCccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcchh
Q 011783 268 SLLKNWPLMSSIIVYCV-FSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIM 346 (477)
Q Consensus 268 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 346 (477)
+.+++|.++..++..++ +...... ..+.|.. .....|+++.+.|......+++.+++.. +.+++.+|++.|+
T Consensus 247 ~~l~~~~i~~~l~fifl~~~~~~~~---~~~~f~~---~~~~lG~s~~~~G~~~~~~~v~~i~g~~-~~~~~~~~~~~r~ 319 (468)
T TIGR00788 247 GAIQLLEIAKPLIFIFLSYANLPGA---SGSVFCA---TTQCLPGGPSFSGMSKVVGNLGSLCGVG-GYDRFLKTFPYRL 319 (468)
T ss_pred HHHhcHHHHHHHHHHHHHHhhcCCC---CceeEEE---EcccCCCCcchhhhHHHHHHHHHHHHHH-HHHHHHhhCCHHH
Confidence 56778888775555444 2211111 1111111 1234899999999999999999999988 7777788999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhh----hhHHHHHHHHHHHHhhhhHHHHhHHHHHHhhcCCcchhhHHhHHHHHHHHHH
Q 011783 347 VARIAGVLTIPLLTSYPYIAMLSG----FGLAFLLNCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIAMTGMSLF 422 (477)
Q Consensus 347 ~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g 422 (477)
.+..+.++..++............ ............+.++..+........+..+..|++.+|+.+++.+++.++|
T Consensus 320 ~l~~~~~l~~~~~~~~~~l~~~~~~~~gi~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~p~~~egt~~al~~s~~~lg 399 (468)
T TIGR00788 320 LFGVTTLLYTLSSLFDLILVKRWNLAFGISDEVFVLGDSIIAEVLAQLKFMPFLVLLARLCPSGCESSVFALLASILHLG 399 (468)
T ss_pred HHHHHHHHHHHHHhCceeeeeccccccCCCCeeeeeehhHHHHHHHHHHHccHHHHHHHhCCCCceehHHHHHHHHHHHH
Confidence 998888887776544321110000 0011123333344455666677777889999999999999999999999999
Q ss_pred HHHhhhHHHHHHHHhh
Q 011783 423 KAAGPAGGGALFSWAQ 438 (477)
Q Consensus 423 ~~~~~~~~g~l~~~~~ 438 (477)
..+++.++|.+.++.+
T Consensus 400 ~~v~~~~gg~l~~~~g 415 (468)
T TIGR00788 400 SSVSGFLGVLLMETIG 415 (468)
T ss_pred HHHHHHHHHHHHHHcC
Confidence 9999999999999874
No 107
>PRK09848 glucuronide transporter; Provisional
Probab=99.90 E-value=2e-20 Score=181.58 Aligned_cols=356 Identities=16% Similarity=0.116 Sum_probs=223.2
Q ss_pred CchhHHHHHHHHHHHhhhchhchHhHHH-HHHHHhcccccchhhhhhhHHHHHHHHHHHHHHhhhhhhhhhhc----CCc
Q 011783 38 LPITELFSIWIIVLCTALPISSLFPFLY-FMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRY----GRK 112 (477)
Q Consensus 38 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~s~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~----Grr 112 (477)
.+++..+.-.++.+...+......+.++ ++.+.+|++..+ +|.+.++..+..++..++.|+++||. |||
T Consensus 5 ~~~~~~~~yg~g~~~~~~~~~~~~~~l~~y~~~~~gl~~~~------~g~~~~~~~~~~~~~~~~~G~l~Dr~~~~~Gr~ 78 (448)
T PRK09848 5 LSWRTIVGYSLGDVANNFAFAMGALFLLSYYTDVAGVGAAA------AGTMLLLVRVFDAFADVFAGRVVDSVNTRWGKF 78 (448)
T ss_pred ccHHHHHhhccchHHhHHHHHHHHHHHHHHHHHHcCCCHHH------HHHHHHHHHHHHHHhhhhheeeeecCCCCCcCc
Confidence 3445555555666666666666666665 667778999999 99999999999999999999999996 777
Q ss_pred hhh-HHHHHHHHHHHHHHH-h----hh--hHHHHHHHHHHhhhcccchhhH-HHHhhhhcc-ccchhhHHHHHHHHhH--
Q 011783 113 PVI-IMGTASVVIFNTLFG-L----SV--NFWMAVLTRFLLGSLNGLLGPI-KAYACEIFR-EEHQALGLSTVSTAWG-- 180 (477)
Q Consensus 113 ~~~-~~~~~~~~i~~~~~~-~----~~--~~~~l~~~r~l~G~~~g~~~~~-~~~i~~~~~-~~~r~~~~~~~~~~~~-- 180 (477)
|.. .++.+...+..++.. . .+ .....++...+.+++.+...+. .++..+..+ ++||.+..+.-..+.+
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~r~~~~~~r~~~~~~~ 158 (448)
T PRK09848 79 RPFLLFGTAPLMIFSVLVFWVPTDWSHSSKVVYAYLTYMGLGLCYSLVNIPYGSLATAMTQQPQSRARLGAARGIAASLT 158 (448)
T ss_pred hHHHHHHHHHHHHHHHHHHhCcCCCCcchHHHHHHHHHHHHHHHHHHhcccHhhhhhhhcCCHHHHHHHHHHHHHHHHHH
Confidence 754 555554544444332 1 11 2333455556777777776655 777776664 4688887766554433
Q ss_pred ---HHHHHHHhHHHHhhhccccCCcccccccccccccchHHHHHHHHHh---hccccccCCCCCCccchhhhhhhhhhcc
Q 011783 181 ---IGLIIGPALGGFLAQPAEKYPNLFSSESLFGKFPYFLPCLCISLFA---FGETLHRHNDDDDSCDVSYDALESASAE 254 (477)
Q Consensus 181 ---~g~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (477)
++..++|.+++....... ...+.|+.++ .+...+..++. .+|+.+. + ++
T Consensus 159 ~~~~~~~~~p~i~~~~g~~~~--~~~~~~~~~~-----~v~~~~~~~~~~~~~~e~~~~---~-~~-------------- 213 (448)
T PRK09848 159 FVCLAFLIGPSIKNSSPEEMV--SVYHFWTIVL-----AIAGMVLYFICFKSTRENVVR---I-VA-------------- 213 (448)
T ss_pred HHHHHHHHHHHHHHhCCCchh--hhHHHHHHHH-----HHHHHHHHHHHHcCcEeccCC---C-cc--------------
Confidence 445555655543211000 0122232221 11111111111 1222110 0 00
Q ss_pred chhhcccCCchhhhhhcchhhHHHHHHHHHHHhhhhhhHHHHHHhhcCcccCCccccchhhhHHHHHHHHHHHHHHHHHH
Q 011783 255 VKEEEGREATPKKSLLKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSL 334 (477)
Q Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~ 334 (477)
+.+....++.++|||.++...+..++............+.|..+. +|.++...++......++.+++.+ +
T Consensus 214 ----~~~~~~~~~~l~~n~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~g~~~~~~~~~~~~~~~~~~~~~~-l 283 (448)
T PRK09848 214 ----QPSLKISLQTLKRNRPLFMLCIGALCVLISTFAVSASSLFYVRYV-----LNDTGLFTVLVLVQNLVGTVASAP-L 283 (448)
T ss_pred ----CCCHHHHHHHHhCCchHHHHHHHHHHHHHHHHHHhhhheeeEeee-----cCChHHHHHHHHHHHHHHHHHHHH-H
Confidence 111123467789999998888877777666666665556555543 666665555544444556666766 8
Q ss_pred HHHHHHhhcchhHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhhhhHHHHhHHHHHHhhcCCcc-------h
Q 011783 335 YPFLERILGPIMVARIAGVLTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVDQD-------Q 407 (477)
Q Consensus 335 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~ 407 (477)
.+++.||+++|+.+..+..+..++.+.+.+.... ..+ .......+.+++.+...+...++..+..|.+ .
T Consensus 284 ~~~l~~r~g~~~~~~~g~~~~~i~~~~~~~~~~~---~~~-~~~~~~~l~g~G~~~~~~~~~al~~~~~~~~~~~~g~r~ 359 (448)
T PRK09848 284 VPGMVARIGKKNTFLIGALLGTCGYLLFFWVSVW---SLP-VALVALAIASIGQGVTMTVMWALEADTVEYGEYLTGVRI 359 (448)
T ss_pred HHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcCch---hHH-HHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHhhCccc
Confidence 8999999999999999988777776655442211 112 2223334455667777788888888877654 4
Q ss_pred hhHHhHHHHHHHHHHHHHhhhHHHHHHHHhh
Q 011783 408 RGAANGIAMTGMSLFKAAGPAGGGALFSWAQ 438 (477)
Q Consensus 408 ~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~~ 438 (477)
+|..+|+.+....+|..+++.+.|.+++..+
T Consensus 360 ~G~~~~~~~~~~klg~aig~~i~g~~l~~~G 390 (448)
T PRK09848 360 EGLTYSLFSFTRKCGQAIGGSIPAFILGLSG 390 (448)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 5999999999999999999999999988763
No 108
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=99.89 E-value=1.1e-19 Score=173.79 Aligned_cols=355 Identities=17% Similarity=0.127 Sum_probs=246.1
Q ss_pred hhHHHHHHHHHHHHHHhhhhhhhhhhcCCchhhHH-HHHHHHHHHHHHHhh-h-hHHHHHHHHHHhhhcccchhhH-HHH
Q 011783 83 YAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIM-GTASVVIFNTLFGLS-V-NFWMAVLTRFLLGSLNGLLGPI-KAY 158 (477)
Q Consensus 83 ~~g~~~s~~~~~~~~~~~~~G~l~Dr~Grr~~~~~-~~~~~~i~~~~~~~~-~-~~~~l~~~r~l~G~~~g~~~~~-~~~ 158 (477)
+.++..++..+..++..|+.|.++|+-|+||.++. ..++..+++.+..+. + +++...+.-++.-++.+...+. .++
T Consensus 71 ~~~~~~sis~l~~all~P~lGa~aD~~~~Rk~~l~~~~~~~~~~~~~l~~v~~~~~~~~~~l~iia~v~~~~~~vfyna~ 150 (477)
T PF11700_consen 71 LWLYANSISGLLQALLAPFLGAIADYGGRRKRFLLIFTLLGVLATALLWFVSPGQWWLALVLFIIANVGYEASNVFYNAY 150 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcccccchHHHHHHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 36788899999999999999999999987766554 455556666666664 3 4544455555555566666666 999
Q ss_pred hhhhccccch--------------------------hhHHHHHHHHhHHHHHHHHhHHHHhhhccccC-Ccccccccccc
Q 011783 159 ACEIFREEHQ--------------------------ALGLSTVSTAWGIGLIIGPALGGFLAQPAEKY-PNLFSSESLFG 211 (477)
Q Consensus 159 i~~~~~~~~r--------------------------~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~-~~~~~~~~~~~ 211 (477)
+.|..+++++ ++..+.-.....+|.++.-++.-.+.....+. ......|..+
T Consensus 151 LP~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vS~~G~a~Gy~G~~v~l~i~l~~~~~~~~~~~~~~~~r~~~- 229 (477)
T PF11700_consen 151 LPDLARPEPRVRAAREPSANGNISDSEYEAVDSLTRGRVSGLGWALGYIGGLVALLISLLLVISPGSTASNTWAIRVAF- 229 (477)
T ss_pred hHhhcCCChhhhhhhhhhccCCCChhhhhhHHHhhhchhHHHHHHHHHHHHHHHHHHHHHHHHcCCCccccchhhhHHH-
Confidence 9999999888 89988888888888888777765554322211 0011112222
Q ss_pred cccchHHHHHHHH------HhhccccccCCCCCCccchhhhhhhhhhccchhhcccCCchhhhhhcchhhHHHHHHHHHH
Q 011783 212 KFPYFLPCLCISL------FAFGETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKSLLKNWPLMSSIIVYCVF 285 (477)
Q Consensus 212 ~~~~~~~~~~~~~------~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (477)
....+...+ +.+|+.++.++.++. .+. .... -++.....+++.|.|+....++.++++
T Consensus 230 ----~~~a~ww~vfsiP~~~~~~~~~~~~~~~~~-~~~----~~~g-------~~~l~~t~k~~~~~~~~~~fLia~~l~ 293 (477)
T PF11700_consen 230 ----LIVALWWLVFSIPLFLWLPDRPGPRPLPSG-SSY----LRFG-------FKRLWRTFKEIRKLRQLFLFLIAYFLY 293 (477)
T ss_pred ----HHHHHHHHHHHHHHHHhCCCCCCCCCCCcc-hhH----HHHH-------HHHHHHHHHHHHhChHHHHHHHHHHHH
Confidence 222222222 233333331111110 000 0000 111223567777889999999999999
Q ss_pred HhhhhhhHHHHHHhhcCcccCCccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcch--hHHHHHHHHHHHHHHHHH
Q 011783 286 SLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPI--MVARIAGVLTIPLLTSYP 363 (477)
Q Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~--~~~~~~~~~~~~~~~~~~ 363 (477)
.-.......+...|..+. +|++..+...+.....+.++++.+ +.+++.||+|.| +++........+..+...
T Consensus 294 ~dg~~ti~~~~~i~a~~~-----lg~s~~~l~~~~l~~~i~a~~Ga~-~~g~l~~r~g~k~~~~l~~~l~~~~~i~~~g~ 367 (477)
T PF11700_consen 294 SDGVNTIISFAGIYATEV-----LGMSTTQLIVFGLVVQIVAIIGAL-LFGWLQDRFGPKTKRTLLISLILWIIIPLYGL 367 (477)
T ss_pred HHHHHHHHHHHHHHHHHh-----cCcCHHHHHHHHHHHHHHHHHHHH-HHHHHHHHhCCchhHHHHHHHHHHHHHHHHHH
Confidence 888888888888887755 899999999999999999999999 889999999988 777666655533322211
Q ss_pred H--HHHhhhhhHHHHHHHHHHHHhhhhHHHHhHHHHHHhhcCCcchhhHHhHHHHHHHHHHHHHhhhHHHHHHHHhhhhc
Q 011783 364 Y--IAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIAMTGMSLFKAAGPAGGGALFSWAQKRL 441 (477)
Q Consensus 364 ~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~ 441 (477)
+ .....+......+.+...+.+.+.+...+...++.+++.|+++.+..+|++.......+.+||.+.|.+.+.++
T Consensus 368 ~G~~~~~~g~~~~~~f~~~a~~~G~~~G~~qs~sRs~~~~LiP~g~e~efFgly~i~gk~ss~lGPll~g~i~~~tg--- 444 (477)
T PF11700_consen 368 FGFWPSFFGLKSPWEFWVLAVLIGLFMGGIQSASRSLFSRLIPPGREAEFFGLYAITGKASSWLGPLLFGLITDATG--- 444 (477)
T ss_pred HHhhhcccCcccHHHHHHHHHHHHHHhhhHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhC---
Confidence 1 11111111222344455566788899999999999999999999999999999999999999999999999982
Q ss_pred cccCCCCchHHHHHHHHHHHHHHHHHhh
Q 011783 442 DASFLPGSQMVFFVLNVVEAIGVLMTFK 469 (477)
Q Consensus 442 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 469 (477)
+.+..+....++.+++.++...
T Consensus 445 ------~~r~g~~~l~~lf~~gl~ll~~ 466 (477)
T PF11700_consen 445 ------SQRYGFLFLLVLFLIGLILLFF 466 (477)
T ss_pred ------CchhHHHHHHHHHHHHHHHHhh
Confidence 3667888888888888887765
No 109
>PF13347 MFS_2: MFS/sugar transport protein
Probab=99.88 E-value=3e-20 Score=179.15 Aligned_cols=344 Identities=14% Similarity=0.068 Sum_probs=242.2
Q ss_pred hHHHHHHHHhcccccchhhhhhhHHHHHHHHHHHHHHhhhhhhhhh----hcCCchh-hHHHHHHHHHHHHHHHhh-h--
Q 011783 62 PFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVAD----RYGRKPV-IIMGTASVVIFNTLFGLS-V-- 133 (477)
Q Consensus 62 ~~~~~~~~~~~~s~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~D----r~Grr~~-~~~~~~~~~i~~~~~~~~-~-- 133 (477)
...+.+.+.+|+++.. .|++..+..+..++..|+.|.++| |+||||. ++++.+..+++.+++... +
T Consensus 23 ~~~~f~~~~~gl~~~~------~g~i~~~~~i~dai~dp~~G~~sDr~~tr~Grrrp~~l~g~i~~~~~~~llf~~~p~~ 96 (428)
T PF13347_consen 23 YLLYFYTDVLGLSPAL------AGLILLVGRIWDAITDPLIGYLSDRTRTRWGRRRPWILIGAILLALSFFLLFSPPPAG 96 (428)
T ss_pred HHHHHHHHHcCCCHHH------HHHHHHHHHHhhhhcCCcEEEEEeeecccccccceEeehhhHHHHHHHHHhhccccch
Confidence 3445777888999998 999999999999999999999999 8997765 556888888888877765 4
Q ss_pred -----hHHHHHHHHHHhhhcccchhhH-HHHhhhhcc-ccchhhHHHHHHHHhHHHHHHHHhHHHHhhhccccCCccccc
Q 011783 134 -----NFWMAVLTRFLLGSLNGLLGPI-KAYACEIFR-EEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSS 206 (477)
Q Consensus 134 -----~~~~l~~~r~l~G~~~g~~~~~-~~~i~~~~~-~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~~~~ 206 (477)
...++.+..++..++....... .++.+|..+ ++||.+..+.-.....+|..+...+.+.+.+...+-+...+|
T Consensus 97 ~~~~~~~~~~~~~~~l~~~~~t~~~i~~~al~~~lt~~~~~R~~l~~~~~~~~~~g~~l~~~~~~~l~~~~g~~~~~~~~ 176 (428)
T PF13347_consen 97 LSFTAKLVWLFVFYILFDIAYTFVQIPYNALIPELTPDPDERTRLSSWRMIFSMIGSLLASFLAPILVSWFGGGDTSNGY 176 (428)
T ss_pred hhhhhHHHHHHHHHHHHHHhhhhccCchhhcCccccccHhhhhhHHHHHHHHHHHHHHHHHHHhhhhhhhhccCccchHH
Confidence 2344567777778887776555 999999998 579999999999999999987777777766532211111133
Q ss_pred ccccccccchHHHHHHHHHhhccccccCCCCCCccchhhhhhhhhhccchhhcccCCchhhhhhcchhhHHHHHHHHHHH
Q 011783 207 ESLFGKFPYFLPCLCISLFAFGETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKSLLKNWPLMSSIIVYCVFS 286 (477)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (477)
+.... .+.++..+..++.....++.+ ++.+.+ +++.+..+..++++|||+++......++..
T Consensus 177 ~~~~~--v~~iv~~v~~~i~~~~~ke~~--~~~~~~--------------~~~~~~~~~~~~~~~nr~~~~l~~~~~~~~ 238 (428)
T PF13347_consen 177 RWMAL--VLAIVGLVFFLITFFFVKERS--VEVTEQ--------------EKKISLRDSLRSLFRNRPFRILLLAFFLQW 238 (428)
T ss_pred HHHHH--HHHHHHHHHhhhhhheeeecc--cccccc--------------ccccccccchhhhcccchHHHHHHHHHHHH
Confidence 32220 001111111111111111100 000000 013344567888999999999888888877
Q ss_pred hhhhhhHHHHHHhhcCcccCCccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHH
Q 011783 287 LHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTIPLLTSYPYIA 366 (477)
Q Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 366 (477)
..........+.|..+. .|.+ ...+.+.....+..+++.+ +.+++.||+|+|+.+..+..+.+++.+.+.+..
T Consensus 239 ~~~~~~~~~~~y~~~~v-----l~~~-~~~~~~~~~~~~~~~v~~~-~~~~l~~r~gk~~~~~~~~~~~~~~~~~~~~~~ 311 (428)
T PF13347_consen 239 LAFALMNTFLPYYFTYV-----LGNE-GLISIFMLIFFVASIVGSP-LWGRLSKRFGKKKVYIIGLLLAALGFLLLFFLG 311 (428)
T ss_pred hhhhhhhhHHHHHHHHH-----hcCc-hhhHHHHHHHHHHHHHHHH-HHHHHHHHccceeehhhhHHHHHHHHHHHHHHH
Confidence 77777777777666654 3433 4556777777888888877 889999999999999999999888888776665
Q ss_pred HhhhhhHHHHHHHHHHHHhhhhHHHHhHHHHHHhhcCC-------cchhhHHhHHHHHHHHHHHHHhhhHHHHHHHHhhh
Q 011783 367 MLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVD-------QDQRGAANGIAMTGMSLFKAAGPAGGGALFSWAQK 439 (477)
Q Consensus 367 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~ 439 (477)
.. ......+...+.+++.+..+....++.+|..+ ++..|..+|+.+....++..+++.+.|.+.+..+-
T Consensus 312 ~~----~~~~~~i~~~l~gi~~~~~~~~~~a~~ad~id~~e~~tg~r~~g~~~s~~~~~~k~~~~la~~i~g~~l~~~Gy 387 (428)
T PF13347_consen 312 PG----SPWLVLILFILAGIGYGAFFVIPWAMLADVIDYDEWKTGRRREGMYFSVNSFFIKIGQGLAGAIVGLLLALVGY 387 (428)
T ss_pred hh----hHHHHHHHHHHhHhhhcccccccccccccchhhHHHhcCCCchHHHHHhhhhhhHHHHHHHHHHHHHHHHHhCc
Confidence 31 12234444455567777777888888888776 34569999999999999999999999999987643
Q ss_pred h
Q 011783 440 R 440 (477)
Q Consensus 440 ~ 440 (477)
.
T Consensus 388 ~ 388 (428)
T PF13347_consen 388 D 388 (428)
T ss_pred C
Confidence 3
No 110
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=99.87 E-value=7.4e-20 Score=167.22 Aligned_cols=287 Identities=15% Similarity=0.115 Sum_probs=199.0
Q ss_pred HhhhhHHHHHHHHHHhhhcccchhhH-HHHhhhhccccchhhHHHHHHHHhHHHHHHHHhHHHHhhhccccC--------
Q 011783 130 GLSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKY-------- 200 (477)
Q Consensus 130 ~~~~~~~~l~~~r~l~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~-------- 200 (477)
+...+|+.++++-++.|.|.+...+. +.++++..++|++++.+++.+..+++|..+||.+++.+......-
T Consensus 5 ~~~~~~~~~l~~~f~~g~G~~~lq~~~n~~v~~~~~~~~~~~~l~~~~~~~~~G~~~gP~i~~~~i~~~~~~~~~~~~~~ 84 (310)
T TIGR01272 5 ASQRYYVLFLGALFVLASGLTILQVAANPYVSILGPIETAASRLALTQAFNKLGTTVAPLFGGSLILSGAGDLSMQVATA 84 (310)
T ss_pred HHhhHHHHHHHHHHHHHhhHHHHHhhHHHHHHHHCCcchHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCCcchhhhhhhh
Confidence 35678999999999999999999988 999999999999999999999999999999999999887422100
Q ss_pred -CcccccccccccccchHHHHHHHHHhhccccccCCCCCCccchhhhhhhhhhccchhhcccCCchhhhhhcchhhHHHH
Q 011783 201 -PNLFSSESLFGKFPYFLPCLCISLFAFGETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKSLLKNWPLMSSI 279 (477)
Q Consensus 201 -~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 279 (477)
....+|+..+...........+.+...+ .++. ++ ++.++. ..++....++.+++|.++...
T Consensus 85 ~~~~~~~~~~yl~ia~~~~~~~i~~~~~~-~p~~-~~--~~~~~~--------------~~~~~~~~~~~~~~~~~~l~~ 146 (310)
T TIGR01272 85 NAEAAKVHTPYLLLAGALAVLAIIFAFLP-LPEL-QE--ADVARV--------------SSGDTTQKTSAFQFTHLVLGA 146 (310)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHcc-CCCC-Cc--cccccc--------------ccccccchhhHHhhHHHHHHH
Confidence 0012344433101011111111111111 1111 00 110000 000011223467788888888
Q ss_pred HHHHHHHhhhhhhHHHHHHhhcCcccCCccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHH
Q 011783 280 IVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTIPLL 359 (477)
Q Consensus 280 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 359 (477)
+..+++.....+...+.+.|+.++ ..+|+++.+.+...+....+.++++. +.+++.||+++++.+..+..+..++.
T Consensus 147 ~~~f~yvg~e~~~~~w~~~yl~~~---~~~g~s~~~a~~~~s~~~~~~~iGr~-~~~~l~~r~g~~~~l~~~~~l~~~~~ 222 (310)
T TIGR01272 147 LGIFVYVGAEVSAGSFLVNFLSDP---HALGLPEDQAAHFTAYTWGGAMVGRF-IGSAVMPMISQGRYLAFNAFLAVLLS 222 (310)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhc---ccCCCCHHHHHHHHHHHHHHHHHHHH-HHHHHHHHhCHHHHHHHHHHHHHHHH
Confidence 888888888889999999999643 22689999999999999999999998 99999999999998888777666665
Q ss_pred HHHHHHHHhhhhhHHHHHHHHHHHHhhhhHHHHhHHHHHHhhcCCcchhhHHhHHHHHHHHHHHHHhhhHHHHHHHHhhh
Q 011783 360 TSYPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIAMTGMSLFKAAGPAGGGALFSWAQK 439 (477)
Q Consensus 360 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~ 439 (477)
++..... .... . ....+.+++.+..+|...+...+..|+ +.+++.++. ....+|+++.|.+.|.+.|..
T Consensus 223 ~l~~~~~---~~~~--~--~~~~l~g~~~s~i~P~~~s~a~~~~~~-~~~~asai~-~~~~~Gg~i~P~l~G~lad~~-- 291 (310)
T TIGR01272 223 IGAALTH---GYVA--M--WFVLALGLFNSIMFPTIFSLALNALGR-HTSQGSGIL-CLAIVGGAIVPLLQGSLADCL-- 291 (310)
T ss_pred HHHHHcC---CHHH--H--HHHHHHHHHHHHHHHHHHHHHHhhhhh-hhhhhHHHH-HHHHhcchHHHHHHHHHHHhc--
Confidence 4333222 1111 1 122345678888999988888887774 467777775 677899999999999999987
Q ss_pred hccccCCCCchHHHHHHH
Q 011783 440 RLDASFLPGSQMVFFVLN 457 (477)
Q Consensus 440 ~~~~~~~~g~~~~~~~~~ 457 (477)
|.+..|++..
T Consensus 292 --------g~~~a~~v~~ 301 (310)
T TIGR01272 292 --------GIQLAFALPV 301 (310)
T ss_pred --------cchHHHHHHH
Confidence 7777776433
No 111
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=99.86 E-value=7.1e-19 Score=163.33 Aligned_cols=372 Identities=16% Similarity=0.088 Sum_probs=263.0
Q ss_pred CCchhHHHHHHHHHHHhhhchhchHhHHH-HHHHHhcccccchhhhhhhHHHHHHHHHHHHHHhhhhhhhhhh----cCC
Q 011783 37 GLPITELFSIWIIVLCTALPISSLFPFLY-FMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADR----YGR 111 (477)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~s~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~Dr----~Gr 111 (477)
+.+.+....-.+..+...+........+. ++.+.+|+++.. +|.+..+.=+--++.-|+.|.++|| +||
T Consensus 8 kLs~~eki~Yg~gd~~~~~~~~~~~~yLl~fYTdv~Gis~~~------aG~iflv~RiiDAi~DP~~G~i~D~t~~r~Gr 81 (467)
T COG2211 8 KLSLKEKIGYGLGDFASNFAFGIVVLYLLFFYTDVFGLSAAL------AGTIFLVARIIDAITDPIMGFIVDRTRSRWGR 81 (467)
T ss_pred cccHHHHHhhcchhhHHHHHHHHHHHHHHHHHhcccCCcHHH------HHHHHHHHHHHHHHhcchheeeeccccccccc
Confidence 44555566666677777777777777776 667779999998 9999999999999999999999995 787
Q ss_pred ch-hhHHHHHHHHHHHHHHHhhh------hHHHHHHHHHHhhhcccchhhH-HHHhhhhcc-ccchhhHHHHHHHHhHHH
Q 011783 112 KP-VIIMGTASVVIFNTLFGLSV------NFWMAVLTRFLLGSLNGLLGPI-KAYACEIFR-EEHQALGLSTVSTAWGIG 182 (477)
Q Consensus 112 r~-~~~~~~~~~~i~~~~~~~~~------~~~~l~~~r~l~G~~~g~~~~~-~~~i~~~~~-~~~r~~~~~~~~~~~~~g 182 (477)
+| -++++.+..++...++-.++ +....++...+.+++......- .++.+|..+ ++||.+..++-....++|
T Consensus 82 fRP~lL~g~ip~~i~~~l~F~~p~~~~~~k~~ya~vtY~l~~l~YT~vniPy~al~~~iT~d~~ER~~l~s~R~~~~~~g 161 (467)
T COG2211 82 FRPWLLWGAIPFAIVAVLLFITPDFSMTGKLIYALVTYMLLGLGYTLVNIPYGALGPEITQDPQERASLTSWRMVFASLG 161 (467)
T ss_pred ccHHHHHHhHHHHHHHHHHHcCCCcccCcchHHHHHHHHHHHHHHHheeCchhhcchhhcCCHHHHHHHHHHHHHHHHHH
Confidence 55 56777788888888887776 3455667778888886665444 888888886 789999999999999999
Q ss_pred HHHHHhHHHHhhhccccCCcccccccccccccchHHHHHHHHHhhccccccCCCCCCccchhhhhhhhhhccchhhcccC
Q 011783 183 LIIGPALGGFLAQPAEKYPNLFSSESLFGKFPYFLPCLCISLFAFGETLHRHNDDDDSCDVSYDALESASAEVKEEEGRE 262 (477)
Q Consensus 183 ~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (477)
..+...+.+.+.....+-....+|+..- ..+.+...+..+++...++++..++.+..+.. +.+.
T Consensus 162 ~~l~~~~~~plv~~~g~~~~~~g~~~~~--~~~~vi~~i~~l~~~~~v~ER~~~~~~~~~~~--------------~~~~ 225 (467)
T COG2211 162 GLLVAVLFPPLVKLFGGGDKALGYQGTA--LVLGVIGVILLLFCFFNVKERVVETQPTKTGV--------------KLKL 225 (467)
T ss_pred HHHHHHHHHHHHHHhCCCcchhhHHHHH--HHHHHHHHHHHHHHHHHhhcccCccccCcccc--------------cccH
Confidence 8887777766665433222244444332 11112222222223322222211111111000 2222
Q ss_pred CchhhhhhcchhhHHHHHHHHHHHhhhhhhHHHHHHhhcCcccCCccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 011783 263 ATPKKSLLKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERIL 342 (477)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~ 342 (477)
.......++||++...++...+.........+...+|.+.. .|.+.......+.....+.+++.+ +.+++.+|+
T Consensus 226 ~~~~~~~~~Nrp~~~~l~~~l~~~~~~~i~~s~~~yy~~y~-----lg~~~l~~~~~~~~~~~~~l~~~~-~~p~L~~~~ 299 (467)
T COG2211 226 KDSFLLIFKNRPLLLLLLMNLLLFIAFNIRGSIMVYYVTYV-----LGDPELFAYLLLLASGAGLLIGLI-LWPRLVKKF 299 (467)
T ss_pred HHHHHHHHccchHHHHHHHHHHHHHHHHHHhhhhheeEEEE-----cCChHHHHHHHHHHHHHHHHHHHH-hHHHHHHHh
Confidence 33455788999999988888877777766667777666654 677777777777776666666666 899999999
Q ss_pred cchhHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhhhhHHHHhHHHHHHhhcCC-------cchhhHHhHHH
Q 011783 343 GPIMVARIAGVLTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVD-------QDQRGAANGIA 415 (477)
Q Consensus 343 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~g~~~g~~ 415 (477)
|+|++...+.++..++.+.+.+.+.. .....++...+.+++.+...+..+++.+|.++ .+..|...|..
T Consensus 300 gkk~~~~~~~~~~~i~~~~~~f~~~~----~~~l~~~~~~i~~~g~~~~~~l~wam~~d~vDyge~~TG~R~eGi~~s~~ 375 (467)
T COG2211 300 GKKKLFLIGLLLLAVGYLLLYFTPAG----SVVLIVVALIIAGVGTGIANPLPWAMVADTVDYGEWKTGVRREGIVYSGM 375 (467)
T ss_pred chHHHHHHHHHHHHHHHHHHHhhcCc----chHHHHHHHHHHHHHhhccccccHHHhcchhhHHHHHhCCCchhhHHHHH
Confidence 99999999999999988887776621 12233444455567778888888999988765 56678899999
Q ss_pred HHHHHHHHHHhhhHHHHHHHHhhhh
Q 011783 416 MTGMSLFKAAGPAGGGALFSWAQKR 440 (477)
Q Consensus 416 ~~~~~~g~~~~~~~~g~l~~~~~~~ 440 (477)
..+.-+|.+++..+.|++++..+..
T Consensus 376 tF~~K~g~ala~~~~g~~L~~~Gyv 400 (467)
T COG2211 376 TFFRKLGLALAGFIPGWILGAIGYV 400 (467)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 9999999999999999999987544
No 112
>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only]
Probab=99.86 E-value=3.9e-20 Score=171.97 Aligned_cols=400 Identities=17% Similarity=0.205 Sum_probs=248.2
Q ss_pred ccCCCCchhHHHHHHHHHHHhhhchhchHhHHHHHHHH--hcccccchhhhhhhHHHHHHHHHHHHHHhhhhhhhhhhcC
Q 011783 33 DTKSGLPITELFSIWIIVLCTALPISSLFPFLYFMIKD--FQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYG 110 (477)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~s~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~G 110 (477)
++.++.+||.+++..+..++..+..+++.+..-++.++ .+.+.+. .|++.++..++.+++++..|+...|.+
T Consensus 26 ~~~~~t~wrsi~l~~~~sfl~~v~~sI~~~s~wpYl~~lD~~A~~~f------fG~viaa~slg~~i~~liF~~Ws~k~~ 99 (488)
T KOG2325|consen 26 LDERKTNWRSIYLALLNSFLVAVQFSIYLTSMWPYLQKLDPTATATF------FGLVIAASSLGHAIFSLIFGIWSNKTG 99 (488)
T ss_pred ccccCCchHhHHHHHHHHHHHhhhheEEEeecchhhhhcCCCCCcch------hhHHHHHHHHHHHhcchhhcccccccC
Confidence 34456778999999999999999999998888777777 5556666 999999999999999999999999999
Q ss_pred C-chhhHHHHHHHHHHHHHH-Hhh---h-hHHHHHHHHHHhhhcccchhhHHHHhhhhccccchhhHHHHHHHHhHHHHH
Q 011783 111 R-KPVIIMGTASVVIFNTLF-GLS---V-NFWMAVLTRFLLGSLNGLLGPIKAYACEIFREEHQALGLSTVSTAWGIGLI 184 (477)
Q Consensus 111 r-r~~~~~~~~~~~i~~~~~-~~~---~-~~~~l~~~r~l~G~~~g~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~ 184 (477)
+ |+.++.+.++..++.++. +.. + .-+.++++|++.|+|.|......+|+++....++|.++++....+..+|..
T Consensus 100 ~~k~Pli~s~ii~~~g~llY~~l~~~~~~~~y~mL~~R~l~Gvg~~n~a~lR~Y~a~~s~~~dR~rA~a~~~~~~vlg~i 179 (488)
T KOG2325|consen 100 SVKKPLIVSFLIAIIGNLLYLALAYVPNGVKYLMLVARILTGVGVGNFAVLRAYIADASTVEDRPRAFAATSGGFVLGII 179 (488)
T ss_pred CcccCHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHcCcCcccHHHHHHHHHhccCccchHHHHHHhhhHHHHHHH
Confidence 7 889999999999999988 332 3 678999999999999999999999999999999999999999999999999
Q ss_pred HHHhHHHHhhhccc-cCCccc------ccccccccccchHHHHHHHHHhhccccccCCCCCCccchhhhhhhhhhccchh
Q 011783 185 IGPALGGFLAQPAE-KYPNLF------SSESLFGKFPYFLPCLCISLFAFGETLHRHNDDDDSCDVSYDALESASAEVKE 257 (477)
Q Consensus 185 ~g~~~~~~l~~~~~-~~~~~~------~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (477)
+||.++..+..... ++.+.- +-...|......+..++.+.+++.|.++...+++.+.+. +++.+.+
T Consensus 180 lGp~~q~~f~~Lg~~G~~i~~~~~~n~YTap~w~m~i~~i~~~v~i~~~f~E~~~~~~~~~~~~~~-------~~~~~~~ 252 (488)
T KOG2325|consen 180 LGPTIQLAFTPLGEKGFMILPGLIFNMYTAPAWLMAILWIIYIVIILFFFKEVYRGIIDKKKRSVE-------EEKSDIE 252 (488)
T ss_pred HhHHHHHHHhhhcCCceEEcCcceEEecchHHHHHHHHHHHHHHHHHhheeecccCccccccccch-------hhccchh
Confidence 99999888765432 322211 111122111111222333344455555543332221110 0000000
Q ss_pred hcccCCchhhhhhcchhhHHHHHHHHHHHhhhhhhHHHHHHhhcCcccCCccccchhh----hHHHHHHHHHHHHHHHHH
Q 011783 258 EEGREATPKKSLLKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQM----VGEVLAITGFSLLVFQLS 333 (477)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~----~g~~~~~~~~~~~~~~~~ 333 (477)
+.+..+.+ .+..+.++...+...+......+..+.... ..++++..+ .|...++.++..+...+
T Consensus 253 ~~~~~~~d------~~~~~vc~~~~~~~~~~~~~iet~~~~~~m-----~~y~w~~~~av~~~gi~~~~~g~ls~~~~l- 320 (488)
T KOG2325|consen 253 KVKKPKLD------WVAVLVCIFLRFVVNFIATTIETLSSALTM-----VMYGWTGSEAVLYNGITLSISGILSVILLL- 320 (488)
T ss_pred hhccCChh------HHHHHHHHHHHHHHHHHHHHHHhccchHHH-----HHhccccchHHHhhhhHHHHHHHHHHHHHH-
Confidence 00111111 111222223333323222222222222222 124554444 45555555555555444
Q ss_pred HHHHHH-HhhcchhHHHHHHHHHHHHHHHH--HHHHHh------------------------hhhhHHHHHHHHHHHHhh
Q 011783 334 LYPFLE-RILGPIMVARIAGVLTIPLLTSY--PYIAML------------------------SGFGLAFLLNCASVVKNL 386 (477)
Q Consensus 334 ~~~~l~-~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~------------------------~~~~~~~~~~~~~~~~~~ 386 (477)
...... .++.+|+.+..+.........+. ++.... .....+..+....+..+.
T Consensus 321 ~~~f~~l~~i~~r~~~~~g~l~~f~~~~i~~yp~~~~s~pv~~~~~~~~~~~~~~y~wc~~~~~v~~~~~l~~~i~~~g~ 400 (488)
T KOG2325|consen 321 LYIFTRLGKIDKRRIILLGFLIFFLSYYIFTYPWGFYSGPVQPYNTTYAGCDFEEYSWCDTTTAVPLILYLISFIVVFGI 400 (488)
T ss_pred HHHHHHhhhhccceeeeehHHHHHHhhheeeeeccccccccccccccccCcCcccchhhccCcccChhhheeehhheecc
Confidence 222222 33344555555533333332222 111000 000111112222233344
Q ss_pred hhHHHHhHHHHHHhhcCCcchhhHHhHHHHHHHHHHHHHhhhHHHHHHHHhhhhccccCCCCchHHHHHHHHHHHHHHHH
Q 011783 387 LSVSIITGLFILQNRAVDQDQRGAANGIAMTGMSLFKAAGPAGGGALFSWAQKRLDASFLPGSQMVFFVLNVVEAIGVLM 466 (477)
Q Consensus 387 ~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 466 (477)
..........++.++...|++++++.|++......+..++|.+...++... |++..+.+..+..++...+
T Consensus 401 ~~P~~~~~~~tlySkiLgp~~q~~~qg~~~~~~s~~~~~~~~~~t~~~~~~----------g~~~v~~~~~~~~l~~~~l 470 (488)
T KOG2325|consen 401 AFPFISTALDTLYSKILGPRDQGTMQGVFSISGSIARVVGPIFSTAIFTLS----------GPRPVWIILLCLLLVVAAL 470 (488)
T ss_pred ccccccchHHHHHHHHhCCccccceeEEEEeccchhhhhhHHHHhhhHHhc----------CccHHHHHHHHHHHHHHHH
Confidence 444455567788899999999999999999999999999999999999888 8888888777666665544
Q ss_pred H
Q 011783 467 T 467 (477)
Q Consensus 467 ~ 467 (477)
.
T Consensus 471 ~ 471 (488)
T KOG2325|consen 471 W 471 (488)
T ss_pred H
Confidence 3
No 113
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=99.85 E-value=1.5e-19 Score=162.40 Aligned_cols=359 Identities=14% Similarity=0.056 Sum_probs=246.9
Q ss_pred hhhHHHHHHHHHHHHHHhhhhhhhhhhcCCchhhH-HHHHHHHHHHHHHHhhhh---HHHHHHHHHHhhhcccchhhH-H
Q 011783 82 SYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVII-MGTASVVIFNTLFGLSVN---FWMAVLTRFLLGSLNGLLGPI-K 156 (477)
Q Consensus 82 ~~~g~~~s~~~~~~~~~~~~~G~l~Dr~Grr~~~~-~~~~~~~i~~~~~~~~~~---~~~l~~~r~l~G~~~g~~~~~-~ 156 (477)
.+.|...++..+..++.+|+.|.++|+.|+||... ....+..++.++..++++ ++..++.-.+..++.....+. .
T Consensus 58 a~~gy~~aia~llia~LapiLG~iaD~~g~Rk~~~~~f~~i~i~~~~~L~~i~~~s~~~~~l~~~il~~i~~~~s~Vfyd 137 (438)
T COG2270 58 AYWGYASAIAGLLIALLAPILGTIADYPGPRKKFFGFFTAIGIISTFLLWFIPPGSYLLLLLLFLILASIGFEFSNVFYD 137 (438)
T ss_pred hHHHHHHHHHHHHHHHHHHHhhhhhccCCCcchHHHHHHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHHhcchhheehh
Confidence 44788999999999999999999999999766544 455555666666666654 444555567777777776776 9
Q ss_pred HHhhhhccccchhhHHHHHHHHhHHHHHHHHhHH--HHhhhccccCCcc-cccccccc---cccchHHHHHHHHHhhccc
Q 011783 157 AYACEIFREEHQALGLSTVSTAWGIGLIIGPALG--GFLAQPAEKYPNL-FSSESLFG---KFPYFLPCLCISLFAFGET 230 (477)
Q Consensus 157 ~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~--~~l~~~~~~~~~~-~~~~~~~~---~~~~~~~~~~~~~~~l~~~ 230 (477)
+++.+..++++-++..++-.....+|..+.-+.. ..+.....++.-. ++....-. +..+.+..+-..++.+|--
T Consensus 138 s~L~~~~~k~~~~riS~lg~~~gylgs~i~li~~~~~~~~~~~~~~~~~l~~l~~~~~~~~ri~~~l~A~W~li~~iPm~ 217 (438)
T COG2270 138 SMLPRLTTKDNMGRISGLGWALGYLGSVILLIFVVLGFALGQQTGITIILLGLPPADGEDVRITGLLAALWWLLFALPMI 217 (438)
T ss_pred hHhhhhcCccccCcccccccccccccchHHHHHHHHHHhcccccceeEEeeccCccccccchhHHHHHHHHHHHHHhHHH
Confidence 9999999998888887777777777776655443 2222111111111 11100000 2223333333444444422
Q ss_pred cccCCCCCCccchhhhhhhhhhccchhhcccCCchhhhhhcchhhHHHHHHHHHHHhhhhhhHHHHHHhhcCcccCCccc
Q 011783 231 LHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKSLLKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLN 310 (477)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 310 (477)
...++..+.. +...+.+.+. -++-..+.++..+++++...++..+++.-.......+...|.... +|
T Consensus 218 ~~v~~~~~~~-~~~~~~l~~g-------~k~L~~t~k~i~~~~~i~~FLiA~~~~~DGv~til~~~~~fg~~~-----~g 284 (438)
T COG2270 218 LNVHDAEKIS-SPPPTALRNG-------FKELKSTFKEIRGRKNLVLFLIARFFYIDGVNTILAMGGVFGAAD-----LG 284 (438)
T ss_pred hccccccccc-ccchHHHHHH-------HHHHHHHHHHHhcccchHHHHHHHHHHHhhHHHHHHHHHHHHHHH-----cC
Confidence 2111111000 0000001110 112234677788888999999999998887777777777777643 89
Q ss_pred cchhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhhhhHH
Q 011783 311 YSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNLLSVS 390 (477)
Q Consensus 311 ~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 390 (477)
++..+..++.....+.++++.+ +.+++.+|+|.|+++..+.++..+..+...+... .. ......++.+.+.++
T Consensus 285 ls~~~lll~g~~~~vvA~lg~i-i~g~Ld~rfg~k~vl~~~lvi~~~~~~~~~~~~~--~~----~f~i~gll~g~s~G~ 357 (438)
T COG2270 285 LSSTELLLIGIALSVVAALGAI-IAGFLDERFGSKPVLMIGLVILSIAALYLIFLEG--EL----DFWILGLLVGTSLGG 357 (438)
T ss_pred ccHHHHHHHHHHHHHHHHHHHH-HHHHHHHHhCCceeehHHHHHHHHHHHHHHHccc--cH----HHHHHHHHHHHhcch
Confidence 9999999999999999999998 8999999999999998888777666555444332 11 233444555677888
Q ss_pred HHhHHHHHHhhcCCcchhhHHhHHHHHHHHHHHHHhhhHHHHHHHHhhhhccccCCCCchHHHHHHHHHHHHHHHHHhh
Q 011783 391 IITGLFILQNRAVDQDQRGAANGIAMTGMSLFKAAGPAGGGALFSWAQKRLDASFLPGSQMVFFVLNVVEAIGVLMTFK 469 (477)
Q Consensus 391 ~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 469 (477)
......++..+.+|+++-++.+|+++..+.....+||.+.+.+.+.++ ..+..+....++.+++.+...+
T Consensus 358 ~qA~SRSy~~~lvp~~k~~~fFglyaltgra~S~~gp~lv~v~t~iTg---------~~r~g~~~i~vll~iGl~~L~~ 427 (438)
T COG2270 358 AQASSRSYLARLVPKGKEGRFFGLYALTGRAASFLGPFLVAVITQITG---------SSRAGVLSIIVLLLIGLLLLLR 427 (438)
T ss_pred HHHHHHHHHHHhCCCccccceeehhhhhhhHHHHHHHHHHHHHHHHhc---------chhhHHHHHHHHHHhhHhhEEe
Confidence 999999999999999999999999999999999999999999999884 3456777777788888777666
No 114
>PRK11462 putative transporter; Provisional
Probab=99.85 E-value=4.8e-18 Score=164.38 Aligned_cols=361 Identities=14% Similarity=0.039 Sum_probs=220.1
Q ss_pred chhHHHHHHHHHHHhhhchhchHhHHH-HHHHHhcccccchhhhhhhHHHHHHHHHHHHHHhhhhhhhhhh----cCCch
Q 011783 39 PITELFSIWIIVLCTALPISSLFPFLY-FMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADR----YGRKP 113 (477)
Q Consensus 39 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~s~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~Dr----~Grr~ 113 (477)
++++-+.-.++.+...+........+. ++.+..|+++.. +|.+..+.-+--++.-|+.|.++|| +||||
T Consensus 7 ~~~~k~~Yg~g~~~~~~~~~~~~~~l~~fyt~~~Gl~~~~------~g~i~~~~ri~Dai~Dp~~G~~~D~t~~r~Gr~r 80 (460)
T PRK11462 7 SVKEKIGYGMGDAASHIIFDNVMLYMMFFYTDIFGIPAGF------VGTMFLVARALDAISDPCMGLLADRTRSRWGKFR 80 (460)
T ss_pred cHhHHHhhccchhhhhHHHHHHHHHHHHHHHHhhCCCHHH------HHHHHHHHHHHHHHHhhhheehhccCCCCCCCcc
Confidence 334444444555555555555665554 677789999999 9999999999999999999999995 79876
Q ss_pred h-hHHHHHHHHHHHHHHHhhhh------HHHHHHHHHHhhhcccchhhH-HHHhhhhcc-ccchhhHHHHHHHHhHHHHH
Q 011783 114 V-IIMGTASVVIFNTLFGLSVN------FWMAVLTRFLLGSLNGLLGPI-KAYACEIFR-EEHQALGLSTVSTAWGIGLI 184 (477)
Q Consensus 114 ~-~~~~~~~~~i~~~~~~~~~~------~~~l~~~r~l~G~~~g~~~~~-~~~i~~~~~-~~~r~~~~~~~~~~~~~g~~ 184 (477)
. ++++.+..+++.+++...++ +..+++...+..++....... .++.+|..+ ++||++..++...+..+|..
T Consensus 81 p~il~g~i~~~i~~~llf~~p~~s~~~~~~y~~~~~~~~~~~~t~~~ipy~al~~~lt~d~~eRt~l~s~r~~~~~iG~~ 160 (460)
T PRK11462 81 PWVLFGALPFGIVCVLAYSTPDLSMNGKMIYAAITYTLLTLLYTVVNIPYCALGGVITNDPTQRISLQSWRFVLATAGGM 160 (460)
T ss_pred hhHhHHHHHHHHHHHHHHhCCCCCcchHHHHHHHHHHHHHHHHHHHhccHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHH
Confidence 5 55676777777766654442 445666666677776665544 889999887 78999999999999999988
Q ss_pred HHHhHHHHhhhccccCCcccccccccccccchHHHHHHHHHhhccccccCCCCCCccchhhhhhhhhhccchhhcccCCc
Q 011783 185 IGPALGGFLAQPAEKYPNLFSSESLFGKFPYFLPCLCISLFAFGETLHRHNDDDDSCDVSYDALESASAEVKEEEGREAT 264 (477)
Q Consensus 185 ~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (477)
+++.+...+.....+-....+|+... ..+.++..+...+....++++.+.+ + + +.+.+.
T Consensus 161 ~~~~~~~plv~~~g~~~~~~g~~~~~--~i~~ii~~i~~~i~~~~~kE~~~~~-~--~----------------~~~~~~ 219 (460)
T PRK11462 161 LSTVLMMPLVNLIGGDNKPLGFQGGI--AVLSVVAFMMLAFCFFTTKERVEAP-P--T----------------TTSMRE 219 (460)
T ss_pred HHHHHHHHHHHHhCCCchhhhHHHHH--HHHHHHHHHHHHHHHhcceeccCCC-c--c----------------CCCHHH
Confidence 88887766554221111122333221 0011111111112221111111000 0 0 111223
Q ss_pred hhhhhhcchhhHHHHHHHHHHHhhhhhhHHHHHHhhcCcccCCccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Q 011783 265 PKKSLLKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGP 344 (477)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~ 344 (477)
..+..++||.++..+...++.............+|.... .|. +...+.+.....+..+++.. +++++.||+++
T Consensus 220 ~l~~~~~Nk~~~~l~~~~~~~~~~~~~~~~~~~y~~~y~-----~g~-~~~~~~~l~~~~i~~iig~~-l~~~l~~r~gk 292 (460)
T PRK11462 220 DLRDIWQNDQWRIVGLLTIFNILAVCVRGGAMMYYVTWI-----LGT-PEVFVAFLTTYCVGNLIGSA-LAKPLTDWKCK 292 (460)
T ss_pred HHHHHhCChHHHHHHHHHHHHHHHHHHHHhHhhhhhhhh-----cCC-hHHHHHHHHHHHHHHHHHHH-HHHHHHHHhCh
Confidence 567788899888776666555554444444444444432 232 33345566677777788877 88999999999
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhhhhHHHHhHHHHHHhhcCC-------cchhhHHhHHHHH
Q 011783 345 IMVARIAGVLTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVD-------QDQRGAANGIAMT 417 (477)
Q Consensus 345 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~g~~~g~~~~ 417 (477)
|+....+..+..+....+.+.+.. . .... .....+.+++.+...+..+++..|..+ .+..|...+....
T Consensus 293 k~~~~~~~~~~~~~~~~~~~~~~~-~--~~~~-~~~~~l~g~~~~~~~~l~~~m~ad~~d~~e~~tG~r~~g~~~a~~~f 368 (460)
T PRK11462 293 VTIFWWTNALLAVISLAMFFVPMQ-A--SITM-FVFIFVIGVLHQLVTPIQWVMMSDTVDYGEWCNGKRLTGISFAGTLF 368 (460)
T ss_pred HHHHHHHHHHHHHHHHHHHHhchh-H--HHHH-HHHHHHHHHHHHHHHHHHHHHHHHhHhhhHHhcCCCchHHHHHHHHH
Confidence 888765554443333332222211 1 1111 112222344445555666677777665 3444666677778
Q ss_pred HHHHHHHHhhhHHHHHHHHh
Q 011783 418 GMSLFKAAGPAGGGALFSWA 437 (477)
Q Consensus 418 ~~~~g~~~~~~~~g~l~~~~ 437 (477)
...+|.++++.+.|.+++..
T Consensus 369 ~~Klg~alg~~i~g~iL~~~ 388 (460)
T PRK11462 369 VLKLGLAFGGALIGWMLAYG 388 (460)
T ss_pred HHHHHHHHHHHHHHHHHHHc
Confidence 89999999999999999875
No 115
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=99.84 E-value=1.8e-17 Score=149.65 Aligned_cols=367 Identities=16% Similarity=0.066 Sum_probs=249.1
Q ss_pred HHHHHhcccccchhhhhhhHHHHHHHHHHHHHHhhhhhhhhhhcC-----CchhhHH-HHHHHHHHHHHHHhh-----h-
Q 011783 66 FMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYG-----RKPVIIM-GTASVVIFNTLFGLS-----V- 133 (477)
Q Consensus 66 ~~~~~~~~s~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~G-----rr~~~~~-~~~~~~i~~~~~~~~-----~- 133 (477)
.+..|++++..- .+.+.+...+.. ...+.+|..||+.+ ||..+++ |.+..+.+..+..++ .
T Consensus 5 VMIvEL~vpA~l------v~~lval~~~~a-p~R~~~G~~SD~~~s~~G~rRtPyI~~G~~~~~~g~~~ap~a~~~l~~~ 77 (403)
T PF03209_consen 5 VMIVELGVPAWL------VALLVALHYLVA-PLRVWFGHRSDTHPSILGWRRTPYIWGGTLLQAGGLAIAPFALLLLAES 77 (403)
T ss_pred hHHHHhccHHHH------HHHHHHHHHHHH-HHHHHhccccccCcccCcCCchhhhHHHHHHHHHHHHHHHHHHHHHccc
Confidence 456788888777 888888877655 46899999999999 8866555 566666655554442 1
Q ss_pred -------h-HH--HHHHHHHHhhhcccchhhH-HHHhhhhccccchhhHHHHHHHHhHHHHHHHHhHHHHhhhccccCCc
Q 011783 134 -------N-FW--MAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPN 202 (477)
Q Consensus 134 -------~-~~--~l~~~r~l~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~ 202 (477)
. .+ ...+...+.|+|.+...+. .++++|..|+|+|+++.++...+.-+|.+++..+.+.+.+....-|-
T Consensus 78 ~~~~~~~~~~g~~~a~l~F~l~G~G~~~s~T~~lALl~D~~~e~~R~~~v~ivw~Mli~G~iv~ai~~g~lL~~~s~~rL 157 (403)
T PF03209_consen 78 GQQSSGPFWLGLALAALAFLLYGLGVHASGTSFLALLADLAPEERRPRVVAIVWVMLIVGIIVSAIVFGRLLDPFSPERL 157 (403)
T ss_pred ccccccccHHHHHHHHHHHHHHHhhHhHhHHHHHHHHHhcCCHhhhhhhHHHHHHHHHHHHHHHHHHHHHHccccCHHHH
Confidence 1 22 2344456778888887777 99999999999999999999999999999999999998873221111
Q ss_pred ccccccccccccchHHHHHHHHHhh--ccccccCCCCCCccchhhhhhhhhhccchhhcccCCchhhhhhcchhhHHHHH
Q 011783 203 LFSSESLFGKFPYFLPCLCISLFAF--GETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKSLLKNWPLMSSII 280 (477)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~~l--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (477)
. + ++... .++...+.++.+ .|.+..+..+.++++ +.+....++++..+|+......
T Consensus 158 ~---~-v~~~~--a~i~~~l~~ia~wg~E~r~~~~~~~~~~~----------------~~~f~~a~~~~~~~~~a~~f~~ 215 (403)
T PF03209_consen 158 I---Q-VIQGV--ALIALLLNLIALWGQEPRRSRRAAAAERP----------------RPPFREAWRQVWASPQARRFFV 215 (403)
T ss_pred H---H-HHHHH--HHHHHHHHHHHHHhcccCCcccccCCCCC----------------CccHHHHHHHHHhCCChhHHHH
Confidence 0 0 11000 011111111212 132222221001100 2223346777778888777665
Q ss_pred HHHHHHhhhhhhHHHHHHhhcCcccCCccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHH
Q 011783 281 VYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTIPLLT 360 (477)
Q Consensus 281 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 360 (477)
..++..... ....-.-+|+--+.+|++..+...+....+.+..++-...+.++.+|.++++....+...+.+++.
T Consensus 216 fl~l~t~a~-----~~QD~iLEPygg~Vfgmsv~eTT~Lta~~~~G~L~G~~~~g~~l~~~~~~~~~a~~G~~~~~~~f~ 290 (403)
T PF03209_consen 216 FLFLGTLAF-----FMQDVILEPYGGEVFGMSVGETTRLTAFWGGGTLLGMLLAGFLLSRRLGKKRTAALGCLLGALAFA 290 (403)
T ss_pred HHHHHHHHH-----HhhHHHcCCchhHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHHHHH
Confidence 555543322 222333456666669999999999999999999888775555566678888888889888888877
Q ss_pred HHHHHHHhhhhhHHHHHHHHHHHHhhhhHHHHhHHHHHHhhcCCcchhhHHhHHHHHHHHHHHHHhhhHHHHHHHHhhhh
Q 011783 361 SYPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIAMTGMSLFKAAGPAGGGALFSWAQKR 440 (477)
Q Consensus 361 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~ 440 (477)
.+.......+.. .+....++.|++.+.......+...+..++++.|..+|.....+.++..++..++|.+.|.....
T Consensus 291 lii~a~~~~~~~---~~~~~~~l~G~g~G~f~vgals~mM~lt~~~~aG~~mG~WGaaQA~A~Glg~~~GG~~~D~~~~~ 367 (403)
T PF03209_consen 291 LIILAGPLGSPW---LFRPGVFLLGLGNGLFTVGALSLMMDLTSAGRAGLFMGAWGAAQAIARGLGTFLGGALRDLVRAL 367 (403)
T ss_pred HHHHHHhcccch---HHHHHHHHHHHhhhHHHHHHHHHHHhCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 766665544322 33444455567777777777788888888999999999999999999999999999999976544
Q ss_pred ccccCCCCchHHHHHHHHHHHHHHHHHhh
Q 011783 441 LDASFLPGSQMVFFVLNVVEAIGVLMTFK 469 (477)
Q Consensus 441 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 469 (477)
.......+|..+|.+=+++.+++..+...
T Consensus 368 ~~~~~~~aY~~VF~lEa~ll~~a~~ll~~ 396 (403)
T PF03209_consen 368 FGNSPALAYGVVFALEAVLLLAALVLLGR 396 (403)
T ss_pred ccCCcchHHHHHHHHHHHHHHHHHHHHHH
Confidence 43112237889998888887777766554
No 116
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=99.84 E-value=1.1e-17 Score=154.02 Aligned_cols=401 Identities=14% Similarity=0.113 Sum_probs=251.3
Q ss_pred hHHHHHHHHHHHhhhchhchHhHHH-HHHHHhc----ccccchhhhhhhHHHHHHHHHHHHHHhhhhhhhhhhc-CCchh
Q 011783 41 TELFSIWIIVLCTALPISSLFPFLY-FMIKDFQ----IAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRY-GRKPV 114 (477)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~----~s~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~-Grr~~ 114 (477)
|.++.++...+.+.++++.....+- ++..+++ .++++ ..-+.++|..-.-+...++||++||+ |+|+.
T Consensus 21 r~l~~if~vE~WERFsyYGmraiL~~Yl~~~~~~gLg~~~~~------A~~l~~~y~slVY~t~i~GG~laDr~LG~~~t 94 (498)
T COG3104 21 RGLYLIFFVELWERFSYYGMRAILILYLYYQLGDGLGFDETH------ATGLFSAYGSLVYLTPIIGGWLADRVLGTRRT 94 (498)
T ss_pred chHHHHHHHHHHHHHhhhhhHHHHHHHHHHhccccCCcChHh------hHHHHHHHHHHHHHHHHHHHHHHHHhcchhHH
Confidence 6688899999999999887766654 7777777 88887 66677777666668889999999996 99999
Q ss_pred hHHHHHHHHHHHHHHHhhh--hHHHHHHHHHHhhhcccchhhH-HHHhhhhcccc--chhhHHHHHHHHhHHHHHHHHhH
Q 011783 115 IIMGTASVVIFNTLFGLSV--NFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREE--HQALGLSTVSTAWGIGLIIGPAL 189 (477)
Q Consensus 115 ~~~~~~~~~i~~~~~~~~~--~~~~l~~~r~l~G~~~g~~~~~-~~~i~~~~~~~--~r~~~~~~~~~~~~~g~~~g~~~ 189 (477)
++.|.++..++.++.+.++ +...++++-.+.++|.|..-+. .++++|.+|++ +|-..+++++++.++|+.++|++
T Consensus 95 I~lGail~~iGh~~L~~~~~~~~~gl~i~L~~I~iG~Gl~K~NiS~llg~ly~~~DprrD~gFt~fY~~iNiGsl~~p~i 174 (498)
T COG3104 95 IVLGAILMAIGHLVLAISSVSGPGGLYIGLALIIVGTGLFKPNISSLLGELYPKDDPRRDGGFTLFYMGINIGSLIAPII 174 (498)
T ss_pred HHHHHHHHHHHHHHHhccccccccHHHHHHHHHHhccccccccHHHHHHHhcCCCCcccCCCccEEEEEeehHHHHHHHH
Confidence 9999999999999999884 7888999999999999999998 99999999853 58889999999999999999999
Q ss_pred HHHhhhccccCCcccccccccccccchHHHHHHHHHhhccccccCCCCCCccc-h---hh-----------hhh-hhhh-
Q 011783 190 GGFLAQPAEKYPNLFSSESLFGKFPYFLPCLCISLFAFGETLHRHNDDDDSCD-V---SY-----------DAL-ESAS- 252 (477)
Q Consensus 190 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~-~---~~-----------~~~-~~~~- 252 (477)
.+++.+ .++|...|+.........++.....+........+++... . .. ... -...
T Consensus 175 ~~~~~~-------~~g~~~gF~~aavGm~~gl~~f~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 247 (498)
T COG3104 175 TGLLAI-------NYGWHVGFGLAAVGMIIGLVIFLLGRRHVKGIGGVPDPNPLSFNFLLPVLGGLVVMILAALLTLLLN 247 (498)
T ss_pred HHHHHH-------hhCHHHHHHHHHHHHHHHHHHHHHccchhcCCCCCCCccchhhhhhhhhHHHHHHHHHHHHHHHHHH
Confidence 999998 5666666632222222233333333322211111111000 0 00 000 0000
Q ss_pred -ccch----------------hhcccCCchhhhhhcchhhHHHHHHHHHHHhhhhhhHHHHHHhhcCcccCCccccchhh
Q 011783 253 -AEVK----------------EEEGREATPKKSLLKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQM 315 (477)
Q Consensus 253 -~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 315 (477)
+... +.....+.. .+.-|-.....+.+...++...+....+.+..|..+....+-+|+ ...
T Consensus 248 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~-~er~r~~~~~~Lfl~~~iFW~~~~Q~~ssl~~~a~~~v~~~~~g~-~vp 325 (498)
T COG3104 248 QNTFSGVLLVISILIAIIYFAEAFRSPKVF-DERRRLLAAIPLFLFAVIFWALYEQMGSSLNLYADRNVNRQIFGF-EVP 325 (498)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccCccH-HHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHhhcccccce-ecC
Confidence 0000 000001100 111111112222233333333333334445555554322222332 233
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhhcc-----h--hHHHHHHHHHHHHHHHHHHHHHh----hhhhHHHHHHHHHHHH
Q 011783 316 VGEVLAITGFSLLVFQLSLYPFLERILGP-----I--MVARIAGVLTIPLLTSYPYIAML----SGFGLAFLLNCASVVK 384 (477)
Q Consensus 316 ~g~~~~~~~~~~~~~~~~~~~~l~~~~~~-----~--~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~ 384 (477)
.+..-+.+.+..++.++ +..++-.+.++ + .-..++..+++.+++.+...... .+..+....+...++.
T Consensus 326 ~~~fQslNp~~Iii~~p-I~a~l~~~l~~~~~~ps~~~KFalGl~l~g~~fl~l~~~~~~~~~~~~~~s~~~lil~y~l~ 404 (498)
T COG3104 326 PAWFQSLNPFFIILFSP-ILAALWTKLGRGNKQPSTPIKFALGLILAGLGFLILLLAGIWFGGPSGLVSVWWLVLSYVLQ 404 (498)
T ss_pred HHHHHhhCHHHHHHHHH-HHHHHHhHhhcCCCCCCcchHHHHHHHHHHHHHHHHHHHHHhhcCCCCCcCHHHHHHHHHHH
Confidence 46677777777777776 44444444221 1 22335555666665555544111 2223445566667777
Q ss_pred hhhhHHHHhHHHHHHhhcCCcchhhHHhHHHHHHHHHHHHHhhhHHHH------HHHHhhhhccccCCCCchHHHHHHHH
Q 011783 385 NLLSVSIITGLFILQNRAVDQDQRGAANGIAMTGMSLFKAAGPAGGGA------LFSWAQKRLDASFLPGSQMVFFVLNV 458 (477)
Q Consensus 385 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~------l~~~~~~~~~~~~~~g~~~~~~~~~~ 458 (477)
+++.-...|...+++.+..|+...+..++........|+.++..+++. ..+.. .....|...+.
T Consensus 405 s~gEL~iSpvGLs~~t~laP~~~~s~~ma~wfLt~a~~~~l~g~va~~~~~~~~~~~~~----------~~~~~F~~~g~ 474 (498)
T COG3104 405 SFGELFISPVGLSMVTKLAPPALKSFIMAMWFLTVAAGQTLGGQVAGLTAVTDPAYTAF----------IEGRVFGTIGV 474 (498)
T ss_pred HHHHHHhCHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhhceecccccccchhhhhh----------hhhhhHHHHHH
Confidence 899999999999999999999999999999888888888888777663 22222 34456666666
Q ss_pred HHHHHHHHH
Q 011783 459 VEAIGVLMT 467 (477)
Q Consensus 459 ~~~~~~~~~ 467 (477)
..++..+..
T Consensus 475 v~i~~~~~~ 483 (498)
T COG3104 475 VAIVIGILL 483 (498)
T ss_pred HHHHHHHHH
Confidence 655554443
No 117
>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only]
Probab=99.82 E-value=1.7e-17 Score=157.01 Aligned_cols=369 Identities=19% Similarity=0.247 Sum_probs=241.7
Q ss_pred HHHHHHHHhhhchhchHhHHHHHHHHhcccccchhhhhhhHHHHHHHHHHHHHHhhhhhhhhhhcCCchhhHHHHHHHHH
Q 011783 45 SIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVI 124 (477)
Q Consensus 45 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~Grr~~~~~~~~~~~i 124 (477)
...+-.+...+......+..+.....++.+.... .....+.-.....+...+.++..|.++||+|||..+.+......+
T Consensus 26 ~~fl~~fa~~l~~~~~~~~~~~~~ct~~~~~~~~-~~~~~~~~~~~~~~~~~i~s~~iG~lSD~~grk~~L~~~~~~~~l 104 (463)
T KOG2816|consen 26 LLFLYMFSWGLSSTVMTNVILYLACTFGDDYQLE-NGLLLGVKQVTAGLLTLISSPLIGALSDRYGRKVVLLLPLFGTIL 104 (463)
T ss_pred HHHHHHHHHHhcCcchhhhhhhhhcccccCccch-hhhhhhHHHHhhHHHHHHHHhhhHHhhhhhhhhhhHHHHHHHHHH
Confidence 4444555555555555566666666665544331 111123332233678889999999999999999999999999999
Q ss_pred HHHHHHhhhhHHHHHHHHHHhhhcccc---hhhHHHHhhhhccccchhhHHHHHHHHhHHHHHHHHhHHHHhhhccccCC
Q 011783 125 FNTLFGLSVNFWMAVLTRFLLGSLNGL---LGPIKAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYP 201 (477)
Q Consensus 125 ~~~~~~~~~~~~~l~~~r~l~G~~~g~---~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~ 201 (477)
..+...+.. |++++ +.|+..+. .....++++|....++|...+|+.+..+..+..++|.+++.+..
T Consensus 105 ~~~~~~~~~--~~~~~---~~~l~g~~~~~~s~~~a~vadis~~~~R~~~~gll~~~~~~~~~~~p~~~~~~~~------ 173 (463)
T KOG2816|consen 105 PALCLLFQG--YWFFL---LLGLSGGFSAIFSVGFAYVADISSEEERSSSIGLLSGTFGAGLVIGPALGGYLVK------ 173 (463)
T ss_pred hHHHHHHHH--HHHhh---hcccccchhhhhhhhhhheeeccchhHHHHHHHHHHHHHHHHHhHHHHHHHHHHH------
Confidence 988888766 44444 55654333 33349999999999999999999999999999999999999988
Q ss_pred cccccccccc-cccchHHHHHHHHHhhccccccCCCCCCccchhhhhhhhhhccchhhcccCCchhhhhhcchhhHHHHH
Q 011783 202 NLFSSESLFG-KFPYFLPCLCISLFAFGETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKSLLKNWPLMSSII 280 (477)
Q Consensus 202 ~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (477)
..+....+. .........+...+.+||+..+++.++...... +.. ....++..+.....++.-.+|..+..+.
T Consensus 174 -~~~~a~~f~ia~~~~~~~~~y~~~~l~Esl~~~~~~~~~~~~~--~~~---~~~~~~~~~~~~~~~~~~~~r~~l~l~l 247 (463)
T KOG2816|consen 174 -FLGIALVFLIAAASGILSLLYMLLFLPESLQEKERSDATLREL--TPG---SLDSSHVADAFQSLTKVGPDRLLLLLLL 247 (463)
T ss_pred -hcCchHHHHHHHHHHHHHHHHHhhccccccCcccccccccccc--CCC---cccchhhhhhhhhhcccCCCccchHHHH
Confidence 333333331 111123333445566777766554432110000 000 0000001111112222223344444333
Q ss_pred HHHHHHhhhhh-hHHHHHHhhcCcccCCccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHH
Q 011783 281 VYCVFSLHDMA-YSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTIPLL 359 (477)
Q Consensus 281 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 359 (477)
..+........ .......|+. ..++++..+.+.+.+.......+++.+..+.+.+.++.++....|.....+..
T Consensus 248 ~~~~~~~~~~~~~~~~~~~yl~-----~~f~w~~~~~s~~~~~~~~~~~i~~l~~~~~l~~~l~~~~~i~lGl~~~~~~~ 322 (463)
T KOG2816|consen 248 VAFLSSLPEAGGASDVLLLYLK-----AKFGWNKKEFSDLLSLVSILGIISQLLLLPLLSSILGEKRLISLGLLSEFLQL 322 (463)
T ss_pred HHHHHHHHHhcCceeEEEEEEe-----eecCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHhhHHHHHHHHHH
Confidence 33332222211 1112223333 34899999999999999999999999788899999999998889988888888
Q ss_pred HHHHHHHHhhhhhHHHHHHHHHHHHhhhhHHHHhHHHHHHhhcCCcchhhHHhHHHHHHHHHHHHHhhhHHHHHHHHhhh
Q 011783 360 TSYPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIAMTGMSLFKAAGPAGGGALFSWAQK 439 (477)
Q Consensus 360 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~ 439 (477)
..+.+....+.. +..... ........|...+..+..++++++|+++++...+..+...++|.+.+.++..+..
T Consensus 323 ~~~af~~~~w~~--~~~~v~-----~~~~~~~~pa~~s~~s~~v~~~e~g~v~~~is~i~~l~~~~~~~~~~~i~~~t~~ 395 (463)
T KOG2816|consen 323 LLFAFATETWMM--FAAGVV-----VALAGIVFPAIRAFASILVSPEEQGKVFGIISGIEGLSGVVSPALYGNIFALTLD 395 (463)
T ss_pred HHHHHhccchhh--hHHHHH-----HHhhcchhHHHHhHHHhhcccccccchhhHHHHHHHHhhhhhHHHHHHHHHHHHH
Confidence 888776653321 111111 2345677888899999999999999999999999999999999999999988866
Q ss_pred hccc
Q 011783 440 RLDA 443 (477)
Q Consensus 440 ~~~~ 443 (477)
..++
T Consensus 396 ~~~~ 399 (463)
T KOG2816|consen 396 DLPG 399 (463)
T ss_pred hccc
Confidence 6544
No 118
>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=99.82 E-value=1.6e-18 Score=156.62 Aligned_cols=369 Identities=12% Similarity=0.068 Sum_probs=241.0
Q ss_pred CCchhHHHHHHHHHHHhhhchhchHhHHHHHHHHhcccccchhhhhhhHHHHHHHHHHHHHHhhhhhhhhhhcCCchhhH
Q 011783 37 GLPITELFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVII 116 (477)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~Grr~~~~ 116 (477)
+++|-.+....+..+.+.+..-.+.+...+....|+ +.+. .-|+.-+|.+.+....+++-|+.||+|-|...+
T Consensus 41 ~rRW~vLl~~slL~~SN~~qWI~ya~i~n~~~~~Yg-s~~~------~~wlsmIym~v~vp~gf~~mw~ldk~GLR~a~l 113 (480)
T KOG2563|consen 41 PRRWVVLLAFSLLNFSNGMQWIQYAPINNYVNSFYG-SSSA------ADWLSMIYMVVSVPFGFAAMWILDKFGLRTALL 113 (480)
T ss_pred hhHhHHHHHHHHHHhcCcchheeehhHHHHHHHHhc-chHH------HHHHHHHHHHHHHHHhhHHHHhhcccchHHHHH
Confidence 334444445556666666666677777777777888 5555 789999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhhh------hHH--HHHHHHHHhhhcccchhhH-HHHhhhhccccchhhHHHHHHHHhHHHHHHHH
Q 011783 117 MGTASVVIFNTLFGLSV------NFW--MAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGP 187 (477)
Q Consensus 117 ~~~~~~~i~~~~~~~~~------~~~--~l~~~r~l~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~ 187 (477)
++..+.+++..+-..+. .++ ....+..+.+.++-..... ..+..-|++++||..+..+-.++..+|.++|.
T Consensus 114 lgt~ln~iGa~Ir~iss~p~v~~~f~~~l~~~Gq~iaa~Aq~Fim~lPskiA~~WF~~~qra~A~~~~v~~n~LGvavg~ 193 (480)
T KOG2563|consen 114 LGTVLNGIGAWIRLISSLPFVPPLFRRPLTHTGQSIAAAAQPFILGLPSKIAAVWFPPDQRAIATVLGVMGNPLGVAVGF 193 (480)
T ss_pred HHHHHHHHHHHHhhhccCccccccchhhhhHHhHHHHHHhhhHhhccccHHHHhhCCcchhhhhhhHHHhcchHHHHHHh
Confidence 99999999998876653 344 5666777777776666666 56677899999999999999999999999999
Q ss_pred hHHHHhhhccccCCccccccc--ccccccchHHHHH-HHHHhhccccccCCCCCCccchhhhhhhhhhccchhhcccCCc
Q 011783 188 ALGGFLAQPAEKYPNLFSSES--LFGKFPYFLPCLC-ISLFAFGETLHRHNDDDDSCDVSYDALESASAEVKEEEGREAT 264 (477)
Q Consensus 188 ~~~~~l~~~~~~~~~~~~~~~--~~~~~~~~~~~~~-~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (477)
++...+.....+-+. ..|.- .+.....+....+ +..+..++.|+.++......+ .+.+-..
T Consensus 194 llppilV~~~~~~~~-~~~~~~~~f~~~~~l~~l~l~l~~~~~~~~P~tPps~s~~~~---------------~~~~f~~ 257 (480)
T KOG2563|consen 194 LLPPILVPSSKDSED-NSWLFFTLFLGVECLAALLLALVLFVFTKKPPTPPSASQAAL---------------QDASFPK 257 (480)
T ss_pred hccceecCCCCCcch-hHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCchhHhhh---------------hcCcHHH
Confidence 999988875422221 22211 1200001111111 111111122211111100000 0122456
Q ss_pred hhhhhhcchhhHHHHHHHHHHHhhhhhhHHHHHHhhcCcccCCccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Q 011783 265 PKKSLLKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGP 344 (477)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~ 344 (477)
+.++.++|+++....+.+........+....+..-+ ...|++...+|.......+++++++. +.+.+.||.+.
T Consensus 258 si~~~~~n~~F~il~~~ygi~~g~F~~l~~~l~~~l------~~sgY~~~~aG~ig~l~iv~Gmlga~-~~gii~Dktk~ 330 (480)
T KOG2563|consen 258 SIKSCFKNRQFIILAICYGIGLGLFNSLSTLLNLAL------CPSGYEGVFAGYIGALMIVAGMLGAL-ASGIIADKTKK 330 (480)
T ss_pred HHHHHHcCccHHHHHHHHhhhHHHHHHHHHHhhhcc------ccccCCccccchhHHHHHHHHHHHHH-HHHhhhhhhhh
Confidence 788999999998887777765544444333222111 12466667889999999999999998 88888888764
Q ss_pred hh-HHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhhhhHHHHhHHHHHHhhcCCcchhhHHhHHHHHHHHHHH
Q 011783 345 IM-VARIAGVLTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIAMTGMSLFK 423 (477)
Q Consensus 345 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~ 423 (477)
-+ ..+.......++...+..... .....+.+.....+.+++..+..|....+..|..-|..-++..|+.+..+++-+
T Consensus 331 fk~~~~v~~~~~~v~~~~l~~~t~--~~~~~viv~~t~~~~g~~~~~~~Pig~ElgvE~TyPv~E~tSsGll~~~gq~f~ 408 (480)
T KOG2563|consen 331 FKLTTLVLYLFALVGTLMLLTCTL--FLGDSVIVFTTCGLLGFFGTGYLPIGFELGVETTYPVAEGTSSGLLNLSGQIFG 408 (480)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhc--cCCceEehhhhHHHHHHhhcCCCCcceeeeeeeccccCCcccceeEEeehhHHH
Confidence 33 333333333333222222222 111222344444455677788888888888887666778888999999999999
Q ss_pred HHhhhHHHHHHHHh
Q 011783 424 AAGPAGGGALFSWA 437 (477)
Q Consensus 424 ~~~~~~~g~l~~~~ 437 (477)
++-.++.+...+..
T Consensus 409 ~~~~~~~~~~~~~~ 422 (480)
T KOG2563|consen 409 VILVFIMGILAEDL 422 (480)
T ss_pred HHHHHHHHHHhhcc
Confidence 88888877777655
No 119
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=99.72 E-value=5.3e-19 Score=171.60 Aligned_cols=382 Identities=16% Similarity=0.131 Sum_probs=3.0
Q ss_pred HHHHHHHHhhhchhchHhHHHHHHHHhcccccchhhhhhhHHHHHHHHHHHHHHhhhhhhhhhhcCCchhhHHHHHHHHH
Q 011783 45 SIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVI 124 (477)
Q Consensus 45 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~Grr~~~~~~~~~~~i 124 (477)
.+.+..+...+..+.....++.+.+.|+++..+ .|++.+.+-++..+..++..++.+|..|-|.+-+|.++.++
T Consensus 7 ~~~~~~~~q~~~~g~~~~~lttiErRF~l~S~~------~G~i~s~~di~~~~~~~~vsy~g~~~hrprwig~g~~~~~~ 80 (539)
T PF03137_consen 7 FLCLLGLFQMMVSGYVNSSLTTIERRFGLSSSQ------SGLISSSYDIGSLVVVLFVSYFGGRGHRPRWIGIGALLMGL 80 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHH------HHHHHHHHHHHHHHHHHHHHHHhhhcCCcceeeecHHHHHH
Confidence 445556666666677778889999999999999 99999999999999999999999999898999999999999
Q ss_pred HHHHHHhhh--------------------------------------------------hHHHHHHHHHHhhhcccchhh
Q 011783 125 FNTLFGLSV--------------------------------------------------NFWMAVLTRFLLGSLNGLLGP 154 (477)
Q Consensus 125 ~~~~~~~~~--------------------------------------------------~~~~l~~~r~l~G~~~g~~~~ 154 (477)
+++++++-+ -+..++++.++.|+|....++
T Consensus 81 g~~l~~lPhf~~~~y~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~gq~l~GiG~~pl~t 160 (539)
T PF03137_consen 81 GSLLFALPHFLSGPYSYEEASNSNGNSSISSNLCDSSSSSQASSDCQDCCSSSSSSLSGYFYVFILGQLLIGIGATPLYT 160 (539)
T ss_dssp -----------------------------------------------------------------------SSS------
T ss_pred HHHHHhccHhhcCCCccccccccccccccccccccccccccccCccccccccccccchHHHHHHHHHHHHHhccccCCcc
Confidence 998876510 135678899999999999999
Q ss_pred H-HHHhhhhccccchhhHHHHHHHHhHHHHHHHHhHHHHhhhcccc---------------CCcccccccccccccchHH
Q 011783 155 I-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEK---------------YPNLFSSESLFGKFPYFLP 218 (477)
Q Consensus 155 ~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~---------------~~~~~~~~~~~~~~~~~~~ 218 (477)
. .+|+-|.+++++-+..+|+......+|.++|.++|+.+.....+ -||.-.|=..|........
T Consensus 161 LG~tYiDDnv~~~~splYiGi~~~~~~lGPa~Gf~lg~~~L~~yvD~~~~~~~~~~i~p~dp~WvGAWWLGfli~g~~~~ 240 (539)
T PF03137_consen 161 LGITYIDDNVSKKNSPLYIGILYAMSILGPALGFLLGSFCLRIYVDFPKVPPDGVGITPSDPRWVGAWWLGFLICGILLF 240 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ceeeeeccccccccCccchhhhhHHhhccHHHHHHHHHHHHhceeCCccccccCCCCCCCCccHHHHHHHHHHHHHHHHH
Confidence 8 99999999999999999999999999999999999987753211 1222211111111222222
Q ss_pred HHHHHHHhhccccccCCCCCCccchhh---hhh-hhhhccc------hhhcccCCchhhhhhcchhhHHHHHHHHHHHhh
Q 011783 219 CLCISLFAFGETLHRHNDDDDSCDVSY---DAL-ESASAEV------KEEEGREATPKKSLLKNWPLMSSIIVYCVFSLH 288 (477)
Q Consensus 219 ~~~~~~~~l~~~~~~~~~~~~~~~~~~---~~~-~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 288 (477)
...+.++.+|+..+..++.+++.+... ++. .+...+. .+..++-....+++++||.+....+...+....
T Consensus 241 l~aipl~~FPk~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~df~~~l~~Ll~Np~f~~~~la~~~~~~~ 320 (539)
T PF03137_consen 241 LSAIPLFFFPKKLPGTSERQEEKESSERKEEDSDKDSFKDPKSKKSFGKSIKDFPKALKRLLTNPVFMCLILAGVFESFI 320 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHcCCccCCCcccccchhhhhhcchhhhhhhcccccccccchhhhhhhHHHHHHHHhcChHHHHHHHHHHHHHHH
Confidence 223333445544333311111111000 000 0000010 011233455678899999999999998888888
Q ss_pred hhhhHHHHHHhhcCcccCCccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHhhc--chhHHHHHHHHHHHHHHH---HH
Q 011783 289 DMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILG--PIMVARIAGVLTIPLLTS---YP 363 (477)
Q Consensus 289 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~--~~~~~~~~~~~~~~~~~~---~~ 363 (477)
..++..+.|-|++.. ++.++.+++++.....+.+...+.+++|++.+|++ .|..+....+...+..+. ..
T Consensus 321 ~~G~~tF~pKylE~Q-----F~~sas~A~~l~G~v~ip~~~~G~llGG~ivkk~kl~~~~~~~~~~v~~~v~~~~~~~~~ 395 (539)
T PF03137_consen 321 VSGFATFLPKYLESQ-----FGLSASQASLLTGIVSIPGAALGILLGGYIVKKFKLSARGAAKFCIVVSIVSVILYSPLF 395 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHHHHH-----hCCCHHHHHHHHhhhhcchhheehheEEEEEEEecCcHHHHHHHHHHHHHHHHHHHHHHH
Confidence 888888888887754 89999999998887777665555559999999976 444544444444333322 10
Q ss_pred HH-----------HHh----------------------------h-----h-hhHHHHHHHHHHHHhhhhHHHHhHHHHH
Q 011783 364 YI-----------AML----------------------------S-----G-FGLAFLLNCASVVKNLLSVSIITGLFIL 398 (477)
Q Consensus 364 ~~-----------~~~----------------------------~-----~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 398 (477)
+. ... . . -..+..+.+..++..+............
T Consensus 396 ~~~C~~~~~aGv~~~y~~~~~~~~~~~~~~~Cn~~~~~~~~~a~~G~C~~~C~~~~~~Fl~~~~~~~~~~~~~~~p~~~i 475 (539)
T PF03137_consen 396 FLGCPNPPIAGVTVPYHNSTSSSPSCNLTCSCNSCCSSGNGSATPGKCPSDCCNKLIPFLILLFILSFFTFMSQVPSTLI 475 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred eecCCCCceeeecCccccccCCCCCCCCCCCCCCccCCCcccccCCCcCcccccccHHHHHHHHHHHHHHHhcccchhee
Confidence 00 000 0 0 0112223333333334444455555566
Q ss_pred HhhcCCcchhhHHhHHHHHH-HHHHHHHhhhHHHHHHHHh
Q 011783 399 QNRAVDQDQRGAANGIAMTG-MSLFKAAGPAGGGALFSWA 437 (477)
Q Consensus 399 ~~~~~~~~~~g~~~g~~~~~-~~~g~~~~~~~~g~l~~~~ 437 (477)
.-+.+|+++|+.+.|+...+ +-+|.+-||.+.|.+.|..
T Consensus 476 ~LR~V~~~~rs~AlGv~~~~~rllg~IPgPIifG~iiD~t 515 (539)
T PF03137_consen 476 TLRCVPPEQRSFALGVQWLIIRLLGFIPGPIIFGAIIDST 515 (539)
T ss_dssp ----------------------------------------
T ss_pred eeccCChhhcchhhhHHHHHHHhhcCcchHHHHhHHHhhh
Confidence 67889999999999999875 5788899999999999865
No 120
>KOG3626 consensus Organic anion transporter [Secondary metabolites biosynthesis, transport and catabolism]
Probab=99.71 E-value=3.5e-16 Score=151.70 Aligned_cols=384 Identities=16% Similarity=0.144 Sum_probs=273.7
Q ss_pred HHHHHHHHHHhhhchhchHhHHHHHHHHhcccccchhhhhhhHHHHHHHHHHHHHHhhhhhhhhhhcCCchhhHHHHHHH
Q 011783 43 LFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASV 122 (477)
Q Consensus 43 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~Grr~~~~~~~~~~ 122 (477)
+..+.+..+...+..+.+...+..+.+.|+++.++ .|++.+.+-++..+...+..+..-|.-|-+.+-+|.+++
T Consensus 99 l~~l~~~~~~q~l~~~y~~s~IttiErRF~i~Ss~------sG~I~s~~dig~~l~i~fVsYfG~r~HrPr~Ig~G~~~m 172 (735)
T KOG3626|consen 99 LVLLSLAAFAQGLYVGYFNSVITTIERRFKISSSQ------SGLIASSYDIGNLLLIIFVSYFGSRGHRPRWIGIGLVLM 172 (735)
T ss_pred HHHHHHHHHHHHhhhhhhhhhhhhhhhhcCCCCCc------ceeEeeecccchhhhhHhHHHhccccCccceeeechhHH
Confidence 33556667777777778888889999999999999 999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhh-------------------h--------------------------------H-HHHHHHHHHhhhccc
Q 011783 123 VIFNTLFGLSV-------------------N--------------------------------F-WMAVLTRFLLGSLNG 150 (477)
Q Consensus 123 ~i~~~~~~~~~-------------------~--------------------------------~-~~l~~~r~l~G~~~g 150 (477)
+++++++++-+ + + ..++++.++.|+|..
T Consensus 173 ~lgsll~alPHf~~~~y~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~llff~~q~l~GIG~T 252 (735)
T KOG3626|consen 173 GLGSLLFALPHFFSGPYEYELEVIKQSVENPSSSLSFCCCNKSTNLCRPSPENSKREKESTSYPFLLFFLGQLLLGIGAT 252 (735)
T ss_pred HHHHHHHhChHHhcCcchhhhhhhhccccCCccccchhhccCCccccCCCCCcccccccCCchhHHHHHHHHHHhhcCCC
Confidence 99999987620 0 2 256778899999999
Q ss_pred chhhH-HHHhhhhccccchhhHHHHHHHHhHHHHHHHHhHHHHhhhccccC------------CcccccccccccccchH
Q 011783 151 LLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKY------------PNLFSSESLFGKFPYFL 217 (477)
Q Consensus 151 ~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~------------~~~~~~~~~~~~~~~~~ 217 (477)
...+. .+|+-|...+++-+..+|+......+|.++|-++|+++......+ ||.--|-..|.....+.
T Consensus 253 pi~tlGisYiDDnvk~~~SplYlgi~~~~~~lGPaiGfllgS~~l~lYvD~~~~~~~it~~DPrWIGAWWlGFLi~g~~~ 332 (735)
T KOG3626|consen 253 PIFTLGISYIDDNVKKKNSPLYLGILYSMAILGPAIGFLLGSFCLKLYVDFGLSPIGITPTDPRWIGAWWLGFLICGALL 332 (735)
T ss_pred CCccCCCccccccccccCCcHHHHHHHHHHHhhhHHHHHHHHHHHHeeeccccCCCCCCCCCcchhhHHHHHHHHHHHHH
Confidence 99998 999999999999999999999999999999999999987643322 33333322221222223
Q ss_pred HHHHHHHHhhccccccCCCCCCccchhhhhhhhh-hccc---hhhcccCCchhhhhhcchhhHHHHHHHHHHHhhhhhhH
Q 011783 218 PCLCISLFAFGETLHRHNDDDDSCDVSYDALESA-SAEV---KEEEGREATPKKSLLKNWPLMSSIIVYCVFSLHDMAYS 293 (477)
Q Consensus 218 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~-~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (477)
....+.++++|...+...++++..+....+.++. .++. .+..++-+...+++++||.+...++...+......++.
T Consensus 333 ~~~a~p~f~fPk~lp~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~ikdfp~s~~~ll~N~if~~~~l~~~~~~~~~~G~~ 412 (735)
T KOG3626|consen 333 LFSAVPLFFFPKELPKSQKRKRARDLHVLKTESGGAKSDKTFGKKIKDFPKSIKRLLSNPIFMLVVLASVIESLAITGYI 412 (735)
T ss_pred HHHHHHHHhCcccCccccccchhhhhcccccccccccCCcchhhhHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHhhHH
Confidence 3333444556654443222111111000000000 0000 01122345567889999999999999999999999999
Q ss_pred HHHHHhhcCcccCCccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHhhc--chhHHHHHHHHHHHHHHHHH---HH---
Q 011783 294 EIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILG--PIMVARIAGVLTIPLLTSYP---YI--- 365 (477)
Q Consensus 294 ~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~--~~~~~~~~~~~~~~~~~~~~---~~--- 365 (477)
.+.|=|+.+. +|.++..+..++...++.....+.+++|++.+|+. .|....+..+...+.++.+. +.
T Consensus 413 tFlPKyLE~Q-----fg~sas~An~l~G~i~vp~~~~Gi~lGG~iikkfkl~~r~~a~~~~~~~~l~l~~~~~~~~igC~ 487 (735)
T KOG3626|consen 413 TFLPKYLETQ-----FGISASLANILTGSIGVPAAAVGIFLGGLIIKKFKLSARGAAKFVIVCSVLSLLFYSLLFFIGCE 487 (735)
T ss_pred HhhHHHHHHH-----cCCCHHHHHHHhhhhhhhhhhhhhhccceeeeeecccHHHHHHHHHHHHHHHHHHHHHHHEecCC
Confidence 9999988865 99999999999988888887777779999999876 45555555544444433311 10
Q ss_pred ---------------------------------------------------------------H------------H---
Q 011783 366 ---------------------------------------------------------------A------------M--- 367 (477)
Q Consensus 366 ---------------------------------------------------------------~------------~--- 367 (477)
. .
T Consensus 488 ~~~~aG~~~~y~~~~~~~~~~~~~s~Cn~~C~C~~~~~~PVCg~~G~tY~SpChAGC~~~~~~~~~~~~ytnCsCv~~~~ 567 (735)
T KOG3626|consen 488 SSPVAGVTNSYEGSPAFTSHENPFSSCNSDCSCDTSEYEPVCGENGITYFSPCHAGCTESSGTSDGNTIYTNCSCVPTNK 567 (735)
T ss_pred CCcccceecCCCCCCccccCCCchhhhhcCCCCCCcCcCcccCCCCCEEeChhhhCCcccccCCCCceeecccccccccc
Confidence 0 0
Q ss_pred -hh----------h-hhHHHHHHHHHHHHhhhhHHHHhHHHHHHhhcCCcchhhHHhHHHHHH-HHHHHHHhhhHHHHHH
Q 011783 368 -LS----------G-FGLAFLLNCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIAMTG-MSLFKAAGPAGGGALF 434 (477)
Q Consensus 368 -~~----------~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~-~~~g~~~~~~~~g~l~ 434 (477)
.. . ......+++...+..+......+..+.++.+.+|+|+|.-++|+..++ +-+|.+-+|++.|++.
T Consensus 568 ~~~~~a~~G~C~~~c~~~~~~Fl~~~~~~sf~~~~~~~p~~~i~LR~V~~e~ks~AlG~~~~~irllg~IPsPIifG~~I 647 (735)
T KOG3626|consen 568 NGNGSAKKGYCPNDCCRQFLIFLALFAIGSFIGALGAVPGMLIVLRCVPPEEKSFALGFQWMLIRLLGFIPSPIIFGAVI 647 (735)
T ss_pred CCCceeecCCCCCCcchhhHHHHHHHHHHHHHHHhccCcceEEEEEccCchhchhhhHHHHHHHHHHhcCCchHhhhhhH
Confidence 00 0 111233344444444555555566667778899999999999999874 5788899999999999
Q ss_pred HHh
Q 011783 435 SWA 437 (477)
Q Consensus 435 ~~~ 437 (477)
|..
T Consensus 648 D~t 650 (735)
T KOG3626|consen 648 DTT 650 (735)
T ss_pred hhH
Confidence 964
No 121
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function.
Probab=99.59 E-value=8.6e-13 Score=117.76 Aligned_cols=268 Identities=16% Similarity=0.146 Sum_probs=158.9
Q ss_pred hhhchhchHhHHHHHHHHhcccccchhhhhhhHHHHHHHHHHHHHHhhhhhhhhhhcCCchhhHHHHHHHHHHHHHHHhh
Q 011783 53 TALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLS 132 (477)
Q Consensus 53 ~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~Grr~~~~~~~~~~~i~~~~~~~~ 132 (477)
...+..+-+|.+-.+-+++|.+..| ++.+....+....+..++.|.++||+|||+.-+..+++.+++++.. ..
T Consensus 46 a~~aDWLQGpY~Y~LY~~yg~~~~q------Ia~Lf~~Gf~Ss~i~g~~~G~laD~~Grk~~cl~~cily~~scl~k-~~ 118 (354)
T PF05631_consen 46 AMAADWLQGPYLYALYESYGFSEHQ------IAILFVAGFASSAIFGTFVGSLADRYGRKKACLLFCILYSLSCLTK-HS 118 (354)
T ss_pred HHHHHHhhcchhHHHHHHcCCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHH-hc
Confidence 3445566678777777899999999 9999999999999999999999999999999999999999888644 56
Q ss_pred hhHHHHHHHHHHhhhcccchhhH-HH-Hhhhhccc----cchhhHHHHHH-HHhHHHHHHHHhHHHHhhhccccCCcccc
Q 011783 133 VNFWMAVLTRFLLGSLNGLLGPI-KA-YACEIFRE----EHQALGLSTVS-TAWGIGLIIGPALGGFLAQPAEKYPNLFS 205 (477)
Q Consensus 133 ~~~~~l~~~r~l~G~~~g~~~~~-~~-~i~~~~~~----~~r~~~~~~~~-~~~~~g~~~g~~~~~~l~~~~~~~~~~~~ 205 (477)
++++.++++|++.|++......+ -+ ++.|.-.. +..+.-++... ...++-.+++.+++-++.+.. .++
T Consensus 119 ~~~~~L~~GRvlgGiaTSLLfS~FEsW~V~Eh~~~g~~~~~L~~tF~~~tf~~n~~vAI~aGv~a~~l~~~~-----~~g 193 (354)
T PF05631_consen 119 SNYPVLLLGRVLGGIATSLLFSAFESWMVHEHNKRGFPQEWLSDTFSLATFFGNGVVAIGAGVVANVLADWF-----GFG 193 (354)
T ss_pred cccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHhHHHHHHHhHHHHHHHHHh-----CCC
Confidence 89999999999999999987776 55 45665332 22223222222 122233334444444444411 112
Q ss_pred cccccc-cccchHHHHHHHHHhhccccccCCCCCCccchhhhhhhhhhccchhhcccCCchhhhhhcchhhHHHHHHHHH
Q 011783 206 SESLFG-KFPYFLPCLCISLFAFGETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKSLLKNWPLMSSIIVYCV 284 (477)
Q Consensus 206 ~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (477)
-.+.|. ..++.++..+++....+|......+ .+.. ..+.....+.+.+||+++.+.+...+
T Consensus 194 ~vaPF~~a~~~l~~~~~~I~~~W~ENyg~~~~----~~~~--------------~~~~~~a~~~i~~d~ril~LG~~qsl 255 (354)
T PF05631_consen 194 PVAPFDAAIVLLAVAAVLILKTWPENYGDTSS----SSSL--------------SGSFREAWRAILSDPRILLLGLIQSL 255 (354)
T ss_pred CcchHHHHHHHHHHHHHHHHhcccccCCCccc----ccch--------------HHHHHHHHHHHHcCchhHHHHHHHHH
Confidence 222221 1111111111111122233221111 1100 11122356677888999888888887
Q ss_pred HHhhhhhhHHHHHHhhcCcccCCccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHH
Q 011783 285 FSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTIP 357 (477)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 357 (477)
+-...+.+ ...| .|.... .+ ...-.|++++.+.+..++|+.+....+.++......+.....+..+
T Consensus 256 FE~smy~F---VflW--tPaL~~-~~-~~~P~GlIFssFM~a~MlGS~lf~~l~s~~~~~e~~l~~v~~~aa~ 321 (354)
T PF05631_consen 256 FEGSMYLF---VFLW--TPALDP-DD-EELPLGLIFSSFMVAMMLGSSLFSRLLSKSLRPESLLRYVFAVAAV 321 (354)
T ss_pred HHHHHHHh---eeee--eceecC-CC-CCCCchHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHH
Confidence 76554443 2223 232221 11 1233799999999999999983334455554444444444444333
No 122
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=99.59 E-value=1.3e-14 Score=139.09 Aligned_cols=185 Identities=12% Similarity=0.126 Sum_probs=130.9
Q ss_pred HHHHHHHHhhhchhchHhHHHHHHHHhcccccch--hhhhhhHHHHHHHHHHHHHHhhhhhhhhhhcCCchhhHHHHHHH
Q 011783 45 SIWIIVLCTALPISSLFPFLYFMIKDFQIAKREE--DIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASV 122 (477)
Q Consensus 45 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~--~~~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~Grr~~~~~~~~~~ 122 (477)
.+.+..++............+.+.++.|.++... ......+...++..++..++.++.|+++||+|||+++..+.++.
T Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~g~~~~~~~i~~i~~~~~~g~l~dr~g~r~~l~~~~~~~ 291 (418)
T TIGR00889 212 IFFFFSMLLGAPLQITNIFGNGFLHEFGRNPEFADSFVVKNASIWMSLSQFSEIFFILTIPFFLKRFGIKKVMLLSLVAW 291 (418)
T ss_pred eHHHHHHHHHhHHHHHHHhHHHHHHHhcccccccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHH
Confidence 3444444444444444566676777777554210 00011799999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhh----hHHHHHHHHHHhhhcccchhhH-HHHhhhhccccchhhHHHHHH-HHhHHHHHHHHhHHHHhhhc
Q 011783 123 VIFNTLFGLSV----NFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVS-TAWGIGLIIGPALGGFLAQP 196 (477)
Q Consensus 123 ~i~~~~~~~~~----~~~~l~~~r~l~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~-~~~~~g~~~g~~~~~~l~~~ 196 (477)
+++..+..... +++.+++.+++.|++.+...+. ..++.|++|+++|++++++.+ ...++|..+||+++|.+.+.
T Consensus 292 ~v~~~l~~~~~~~~~~~~~l~l~~~l~g~~~~~~~~~~~~~i~~~~p~~~~g~~~g~~~~~~~~lg~~iGp~l~G~l~~~ 371 (418)
T TIGR00889 292 ALRFGFFAYGDPEYFGYALLFLSMIVYGCAFDFFNISGSVFVEKEVPVHIRASAQGLFTLMCNGFGSLLGYILSGVMVEK 371 (418)
T ss_pred HHHHHHHHHcCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHH
Confidence 88877666532 3466788899999998887777 899999999999999999997 67899999999999999884
Q ss_pred cccCCcccccccccc-cccchHHHHHHHHHhhccc
Q 011783 197 AEKYPNLFSSESLFG-KFPYFLPCLCISLFAFGET 230 (477)
Q Consensus 197 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~ 230 (477)
..+ ...++|+..|. ...+.+...++..++++|+
T Consensus 372 ~g~-~~~~~~~~~f~~~~~~~~i~~~l~~~~~~~~ 405 (418)
T TIGR00889 372 MFA-YGTFDWQTMWLFFAGYIAILAVLFMIFFKYS 405 (418)
T ss_pred hcc-ccCCchHHHHHHHHHHHHHHHHHHHHHhCCc
Confidence 321 00135665552 1112233334444555555
No 123
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=99.59 E-value=2.5e-13 Score=129.84 Aligned_cols=384 Identities=15% Similarity=0.165 Sum_probs=225.2
Q ss_pred HhHHHHHHHHhcccccchhhhhhhHHHHHHHHHHHHHHhhhhhhhhhhcC-----CchhhHHHHHHHHHHHHHHHhh---
Q 011783 61 FPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYG-----RKPVIIMGTASVVIFNTLFGLS--- 132 (477)
Q Consensus 61 ~~~~~~~~~~~~~s~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~G-----rr~~~~~~~~~~~i~~~~~~~~--- 132 (477)
.+..|.+.+++|.++.+ .....+...+... ..+++|.++|-+- ||+-++++.++.+++.+..+..
T Consensus 10 ~~~~~~l~~~l~ls~~~------~~~~~~~~~lPw~-~Kp~~g~lsD~~pi~G~rr~~Y~~i~~~~~~~~~~~~~~~~~~ 82 (433)
T PF03092_consen 10 LAIYPFLKDDLGLSPAQ------LQRLSSLASLPWS-IKPLYGLLSDSFPIFGYRRKPYMIIGWLLGAVSALVLALLPAS 82 (433)
T ss_pred HHHHHHHHHHcCCCHHH------HHHHHHHHhCchH-HhhhHHhhcccccccCCcchHHHHHHHHHHHHHHHHHHhcccc
Confidence 45567889999999999 8888888888775 4589999999863 5556777777776666655553
Q ss_pred -hhHHHHHHHHHHhhhcccchhhH-HHHhhhhcc--ccchhhHHHHHHHHhHHHHHHHHhHHHHhhhccccCCccccccc
Q 011783 133 -VNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFR--EEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSES 208 (477)
Q Consensus 133 -~~~~~l~~~r~l~G~~~g~~~~~-~~~i~~~~~--~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~~~~~~ 208 (477)
.+.....+.-++..+|.+....+ -+++.|... +++|+...+.......+|.+++..++|.+.+. .++++.|.+..
T Consensus 83 ~~s~~~~~~~l~la~~g~a~~DV~aDa~vvE~~~~~p~~~g~lqS~~~~~~~~G~lv~~~l~G~l~~~-~~~~~~f~i~~ 161 (433)
T PF03092_consen 83 ESSAAIAVVLLFLASFGYAFADVAADALVVELARREPESRGDLQSFVWGVRSVGSLVGSLLSGPLLDS-FGPQGVFLISA 161 (433)
T ss_pred cchhhhHHHHHHHHHHHHHHHHHhhhHHHHHHhhcCCchhHHHHHHHHHHHHHHHHHHHHhhhhhhhc-CCCeEEehHHH
Confidence 35666666677778888887776 888888874 34588889999999999999999999999873 33444443322
Q ss_pred ccccccchHHHHHHHHHhhccccccCCCCCCccchhhhhhhhhhccchhhcccCCchhhhhhcchhhHHHHH-HHHHHHh
Q 011783 209 LFGKFPYFLPCLCISLFAFGETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKSLLKNWPLMSSII-VYCVFSL 287 (477)
Q Consensus 209 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 287 (477)
.+ .....+..++..+| ....+.. +..... ++.... .....++.....++.++++.++...+ ..+++..
T Consensus 162 ~~-----~~l~~~~~~~~~~e-~~~~~~~-~~~~~~-~~~~~~---~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~~~~~ 230 (433)
T PF03092_consen 162 AL-----PLLMLIVALFLLEE-RKVRPAD-EVFSFG-KEEVPC---LFGSFREQLSELWRALQQRAIWQPILFFIFFFNL 230 (433)
T ss_pred HH-----HHHHHHHHHHhhhh-ccccccc-hhhccc-ccccch---hhHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHh
Confidence 22 12222233333444 1111111 000000 000000 00001112235566777788887666 3333222
Q ss_pred hhhhhHHHHHHhhcCcccCCccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHHH
Q 011783 288 HDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTIPLLTSYPYIAM 367 (477)
Q Consensus 288 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 367 (477)
....-.. ...|...... .+.++++...+.+..+..++.+++.. +....-.+.+-|+++....++..+..+.-.....
T Consensus 231 ~~~~~~a-~~fy~~~~~~-~gp~fs~~f~~~~~~vg~~~~l~g~~-~y~~~~~~~~~R~~~~~t~~~~~~~~l~~~~lv~ 307 (433)
T PF03092_consen 231 PPSISSA-SSFYFQTDAL-GGPHFSPSFYGTLSIVGSIASLLGIL-LYRKYFSNWSWRRIFVVTTLVSVLASLFDLLLVT 307 (433)
T ss_pred ccCCCCc-cEEEEEeccc-cccccCHHHHHHHHHHHHHHHHHHHH-HHHHHHhCCCHHHHHHHHHHHHHHHhcccEEEEE
Confidence 2111111 0112221111 13458898888888777777777766 4444444556666666655554443222111100
Q ss_pred hhh-----hhHHHHHHHHHHHHhhhhHHHHhHHHHHHhhcCCcchhhHHhHHHHHHHHHHHHHhhhHHHHHHHHhhhhcc
Q 011783 368 LSG-----FGLAFLLNCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIAMTGMSLFKAAGPAGGGALFSWAQKRLD 442 (477)
Q Consensus 368 ~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~ 442 (477)
..+ ... .....-..+........+-....+.++..|+..-|+.+++..++.++|..++..++..+.+..+-...
T Consensus 308 ~~n~~~Gi~d~-~f~lgd~~l~~~~~~i~~mP~lvl~a~lcP~G~Egt~yall~s~~Nlg~~~s~~lg~~l~~~~~vt~~ 386 (433)
T PF03092_consen 308 RWNLDLGIPDQ-WFALGDTILEEVIGMIAFMPSLVLAARLCPKGSEGTVYALLASFSNLGSSVSSTLGAFLMELFGVTRD 386 (433)
T ss_pred EEeeeeCcCCe-EEEEEhHHHHHHHHHHHHHHHHHHHHHHCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcc
Confidence 000 001 11111222223344455555667789999999999999999999999999999999999888753222
Q ss_pred ccCCCCchHHHHHHHHHHHHHHHHHhh
Q 011783 443 ASFLPGSQMVFFVLNVVEAIGVLMTFK 469 (477)
Q Consensus 443 ~~~~~g~~~~~~~~~~~~~~~~~~~~~ 469 (477)
. +.+.....++..++.++...+...
T Consensus 387 ~--f~~l~~lili~~~~~ll~l~ll~l 411 (433)
T PF03092_consen 387 D--FSNLWLLILICSVIQLLPLPLLFL 411 (433)
T ss_pred c--ccchHHHHHHHHHHHHHHHHHHHH
Confidence 2 224555666666666555554433
No 124
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=99.57 E-value=8.2e-14 Score=136.73 Aligned_cols=174 Identities=14% Similarity=0.184 Sum_probs=121.0
Q ss_pred HHHhhhchhchHhHHHHHH-HHhcccccchhhhhhhHHHHHHHHHHHHHHhhhhhhhhhhcCCchhhHHHHHHHHHHHHH
Q 011783 50 VLCTALPISSLFPFLYFMI-KDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTL 128 (477)
Q Consensus 50 ~~~~~~~~~~~~~~~~~~~-~~~~~s~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~Grr~~~~~~~~~~~i~~~~ 128 (477)
.+......+.....+|.+. +++|.+..+ .++..+...++..++.+..|+++||+|||+++..+.++..+....
T Consensus 259 ~~~~~~~~~~~~~~~p~~l~~~~g~s~~~------~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~ 332 (490)
T PRK10642 259 VIATNVTYYMLLTYMPSYLSHNLHYSEDH------GVLIIIAIMIGMLFVQPVMGLLSDRFGRRPFVILGSVALFVLAIP 332 (490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHH
Confidence 3444445555666777655 567888877 778888889999999999999999999999988887654443322
Q ss_pred ---HHhhhhHHHHHHHHHHhhhcccchhhH-HHHhhhhccccchhhHHHHHHHHhHHHHHHHHhHHHHhhhccccCCccc
Q 011783 129 ---FGLSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLF 204 (477)
Q Consensus 129 ---~~~~~~~~~l~~~r~l~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~~ 204 (477)
...+++...+++.|++.|++.+..... ..++.|.+|++.|+++++.......++..++|.+.+++.+...+|+..+
T Consensus 333 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~~~p~~~Rg~~~g~~~~~~~~~g~~~p~i~g~l~~~~~~~~~~~ 412 (490)
T PRK10642 333 AFILINSNVIGLIFAGLLMLAVILNCFTGVMASTLPAMFPTHIRYSALAAAFNISVLVAGLTPTLAAWLVESTQNLMMPA 412 (490)
T ss_pred HHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchHHH
Confidence 223446778888999998876665554 7888999999999999997544455667789999998876433333222
Q ss_pred ccccccccccchHHHHHHHHHhhccccccCC
Q 011783 205 SSESLFGKFPYFLPCLCISLFAFGETLHRHN 235 (477)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 235 (477)
... ....+..++..+++||++++..
T Consensus 413 ~~~------~~~~~i~~~~~~~~pes~~~~~ 437 (490)
T PRK10642 413 YYL------MVVAVIGLITGVTMKETANRPL 437 (490)
T ss_pred HHH------HHHHHHHHHHHHHhccccCCCC
Confidence 211 1123333444556799987643
No 125
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=99.54 E-value=1.1e-13 Score=131.65 Aligned_cols=155 Identities=13% Similarity=0.048 Sum_probs=123.4
Q ss_pred HHHHHHHHHHhhhchhchHhHHHHHHHHhcccccchhhhhhhHHHHHHHHHHHHHHhhhhhhhhhhcCCchhhHHHHHHH
Q 011783 43 LFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASV 122 (477)
Q Consensus 43 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~Grr~~~~~~~~~~ 122 (477)
++.+....+...+.........+.+.++++.++.+ .+++.+.+.++..+++++.|++.||+|||+.+..+.++.
T Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~ 280 (377)
T TIGR00890 207 FWVLYLSFFLNAVSGLLLIGLYKPYGQSLGLSDGF------LVLAVSISSIFNGGGRPFLGALSDKIGRQKTMSIVFGIS 280 (377)
T ss_pred HHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHH
Confidence 33333344444444444445566677888988877 899999999999999999999999999999999999998
Q ss_pred HHHHHHHHhhhhH--HHHHHHHHHhhhcccchhhH-HHHhhhhccccchhhHHHHHHHHhHHHHHHHHhHHHHhhhcccc
Q 011783 123 VIFNTLFGLSVNF--WMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEK 199 (477)
Q Consensus 123 ~i~~~~~~~~~~~--~~l~~~r~l~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~ 199 (477)
.++.++..+.++. ..++...++.|++.+...+. .+++.|.+|+++|+++.|+.+....+|..++|.+.+.+.+
T Consensus 281 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~---- 356 (377)
T TIGR00890 281 AVGMAAMLFIPMLNDVLFLATVALVFFTWGGTISLFPSLVSDIFGPANSAANYGFLYTAKAVAGIFGGLIASHALT---- 356 (377)
T ss_pred HHHHHHHHHcccchhHHHHHHHHHHHHHhccchhccHHHHHHHhhhhhhhhHhHHHHHHHHHHHHHHHHHHHHHHh----
Confidence 8888877776643 33456677888887776666 8899999999999999999999999999999999999987
Q ss_pred CCccccccccc
Q 011783 200 YPNLFSSESLF 210 (477)
Q Consensus 200 ~~~~~~~~~~~ 210 (477)
.++|+..|
T Consensus 357 ---~~g~~~~f 364 (377)
T TIGR00890 357 ---EIGFEYTF 364 (377)
T ss_pred ---hhchhhHH
Confidence 45555554
No 126
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=99.54 E-value=1.2e-13 Score=138.70 Aligned_cols=111 Identities=12% Similarity=0.103 Sum_probs=101.0
Q ss_pred HHHHHHHHHHHHHHhhhhhhhhhhcCCchhhHHHHHHHHHHHHHHHhhhhHHHHHHHHHHhhhcccchhhH-HHHhhhhc
Q 011783 85 GYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIF 163 (477)
Q Consensus 85 g~~~s~~~~~~~~~~~~~G~l~Dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~-~~~i~~~~ 163 (477)
.+...+..++..++.++.|+++||+|||++++++.++.+++.++.+++++...+++.+++.|++.+...+. .++++|++
T Consensus 598 ~~~~~l~~l~~i~G~il~g~L~Dr~GRr~~l~~~~~lsai~~ll~~~~~s~~~ll~~~~l~g~~~~~~~~~~~a~~aEl~ 677 (742)
T TIGR01299 598 YFVNFLGTLAVLPGNIVSALLMDKIGRLRMLAGSMVLSCISCFFLSFGNSESAMIALLCLFGGLSIAAWNALDVLTVELY 677 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 44566777899999999999999999999999999999999999999988888888899988877766666 99999999
Q ss_pred cccchhhHHHHHHHHhHHHHHHHHhHHHHhhh
Q 011783 164 REEHQALGLSTVSTAWGIGLIIGPALGGFLAQ 195 (477)
Q Consensus 164 ~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~ 195 (477)
|.++|++++|+.++...+|.++||.+++.+..
T Consensus 678 Pt~~Rgta~Gi~~~~~rlGaiigp~i~g~L~~ 709 (742)
T TIGR01299 678 PSDKRATAFGFLNALCKAAAVLGILIFGSFVG 709 (742)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999998876
No 127
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=99.54 E-value=7.6e-14 Score=134.08 Aligned_cols=143 Identities=21% Similarity=0.268 Sum_probs=120.4
Q ss_pred HHHHHhhhchhchHhHHHHHHHHhcccccchhhhhhhHHHHHHHHHHHHHHhhhhhhhhhhcCCchhhHHHHHHHHHHHH
Q 011783 48 IIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNT 127 (477)
Q Consensus 48 ~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~Grr~~~~~~~~~~~i~~~ 127 (477)
...+............+|.+.++.|.+..+ .+++.+.+.++..++.++.|+++||+|||+.+..+.+...++.+
T Consensus 227 ~~~~~~~~~~~~~~~~~p~~~~~~g~s~~~------~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~ 300 (406)
T PRK11551 227 ISYFFTLIVLYFLLNWLPSLLVGQGLSRSQ------AGLVQIAFNIGGALGSLLIGALMDRLRPRRVVLLIYAGILASLA 300 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCChhh------hhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHH
Confidence 333333344444555678888889999888 99999999999999999999999999999999888777777777
Q ss_pred HHHhhhhHHHHHHHHHHhhhcccchhhH-HHHhhhhccccchhhHHHHHHHHhHHHHHHHHhHHHHhhhc
Q 011783 128 LFGLSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQP 196 (477)
Q Consensus 128 ~~~~~~~~~~l~~~r~l~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~ 196 (477)
+..+.++.+.+.+.-++.|++.+...+. .+++.|.+|+++|++++|+.+....+|..+||.++|.+.++
T Consensus 301 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~~ 370 (406)
T PRK11551 301 ALAAAPSFAGMLLAGFAAGLFVVGGQSVLYALAPLFYPTQVRGTGVGAAVAVGRLGSMAGPLLAGQLLAL 370 (406)
T ss_pred HHHhcCcHHHHHHHHHHHHHHHHhHHHHHHHHHHHHcchhhhhhhhhHHHHhhhHHHHHHhhhHhhhhcc
Confidence 7777778888888888888876666666 89999999999999999999999999999999999999874
No 128
>PRK15011 sugar efflux transporter B; Provisional
Probab=99.54 E-value=2.4e-13 Score=129.69 Aligned_cols=140 Identities=17% Similarity=0.238 Sum_probs=112.6
Q ss_pred hhchHhHHHH-HHHHhcccccchhhhhhhHHHHHHHHHHHHHHhhhhhhhhhhcCCchhhHHHHHHHHHHHHHHHhhhhH
Q 011783 57 ISSLFPFLYF-MIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLSVNF 135 (477)
Q Consensus 57 ~~~~~~~~~~-~~~~~~~s~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~Grr~~~~~~~~~~~i~~~~~~~~~~~ 135 (477)
...+....|. +.+++|.++.+ .+++.+...++..++.++.|+++||+|||+.+..+.....+........++.
T Consensus 232 ~~~~~~~~p~~l~~~~~~~~~~------~g~~~~~~~~~~i~~~~~~G~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (393)
T PRK15011 232 NSLYIINMPLFIINELHLPEKL------AGVMMGTAAGLEIPTMLIAGYFAKRLGKRFLMRVAAVAGVCFYAGMLMAHSP 305 (393)
T ss_pred HHHHHHHHHHHHHHHcCCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHhhH
Confidence 3444455664 55678999888 8988888888888899999999999999998888776666655555567788
Q ss_pred HHHHHHHHHhhhcccchhhH-HHHhhhhccccchhhHHHHHHHHhHHHHHHHHhHHHHhhhccccCCccccccccc
Q 011783 136 WMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSESLF 210 (477)
Q Consensus 136 ~~l~~~r~l~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~~~~~~~~ 210 (477)
+.+++.+++.+++.|...+. ..+..|.+|+ +|++++++++....+|..+||.++|.+.+ .++|+..+
T Consensus 306 ~~~l~~~~l~~~~~g~~~~~~~~~~~~~~p~-~~g~~~~~~~~~~~lg~~~g~~l~G~i~~-------~~g~~~~~ 373 (393)
T PRK15011 306 AILLGLQLLNAIYIGILGGIGMLYFQDLMPG-QAGSATTLYTNTSRVGWIIAGSLAGIVAE-------IWNYHAVF 373 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC-CcchHHHHHHHHHHHHHHHHHHHHHHHHH-------HhhhHHHH
Confidence 88888999988887776665 7788898884 69999999999999999999999999988 44565554
No 129
>PRK10054 putative transporter; Provisional
Probab=99.52 E-value=2.2e-12 Score=122.90 Aligned_cols=173 Identities=12% Similarity=0.101 Sum_probs=133.2
Q ss_pred hhhHHHHHHHHHHHhhhhhhHHHHHHhhcCcccCCccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHH
Q 011783 273 WPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAG 352 (477)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 352 (477)
+.++...+..++..........+++.|+.+. +|++..+.|+..+...+...+.++ ..|++.||+|+|+.+..+.
T Consensus 7 ~~~~~l~~~~~~~~~g~~~~~~~l~~~l~~~-----~g~s~~~~g~~~s~~~~~~~~~~~-~~G~l~Dr~g~k~~~~~~~ 80 (395)
T PRK10054 7 RSTSALLASSLLLTIGRGATLPFMTIYLSRQ-----YSLSVDLIGYAMTIALTIGVVFSL-GFGILADKFDKKRYMLLAI 80 (395)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----cCCCHHHHHHHHHHHHHHHHHHHH-HHHHHHhhcCcchhHHHHH
Confidence 4466666777777777677777778777643 899999999999999999999988 8999999999999998888
Q ss_pred HHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhhhhHHHHhHHHHHHhhcCCcchhhHHhHHHHHHHHHHHHHhhhHHHH
Q 011783 353 VLTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIAMTGMSLFKAAGPAGGGA 432 (477)
Q Consensus 353 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~ 432 (477)
.+..++.+.+.+.++. +.. .....+.+.......+....+..|..|+++|+++.|+.+...++|.+++|.+.+.
T Consensus 81 ~~~~~~~~~~~~~~~~-----~~~-~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~lg~~igp~l~~~ 154 (395)
T PRK10054 81 TAFASGFIAIPLVNNV-----TLV-VLFFALINCAYSVFSTVLKAWFADNLSSTSKTKIFSLNYTMLNIGWTVGPPLGTL 154 (395)
T ss_pred HHHHHHHHHHHHHhHH-----HHH-HHHHHHHHHHHHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8777777666554431 112 2222223344455667778888999999999999999999999999999999998
Q ss_pred HHHHhhhhccccCCCCchHHHHHHHHHHHHHHHHHh
Q 011783 433 LFSWAQKRLDASFLPGSQMVFFVLNVVEAIGVLMTF 468 (477)
Q Consensus 433 l~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 468 (477)
+.+ . +|+..|.+.+++.+++.+...
T Consensus 155 l~~-~----------g~~~~f~~~~~~~~i~~i~~~ 179 (395)
T PRK10054 155 LVM-Q----------SINLPFWLAAICSAFPLVFIQ 179 (395)
T ss_pred HHH-h----------ccCcHHHHHHHHHHHHHHHHH
Confidence 874 4 688899888877777655443
No 130
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=99.51 E-value=6.9e-14 Score=135.72 Aligned_cols=159 Identities=17% Similarity=0.173 Sum_probs=125.2
Q ss_pred hHHHHHHHHHHHhhhchhchHhHHHHHHHHhcccccchhhhhhhHHHHHHHHHHHHHHhhhhhhhhhhc--CCchhhHH-
Q 011783 41 TELFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRY--GRKPVIIM- 117 (477)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~--Grr~~~~~- 117 (477)
+.++......++..+........+|.+.+++|.+..+ .+++.++..++..+++++.|+++||. ++|+...+
T Consensus 241 ~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~g~s~~~------~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~ 314 (455)
T TIGR00892 241 RGFLVYLSGNVIMFLGFFAPIIFLVPYAKDKGVDEYE------AAFLLSIIGFVDIFARPSCGLIAGLKWIRPHVQYLFS 314 (455)
T ss_pred chHHHHHHHHHHHHHHccchHHHHHHHHHHcCCCHHH------HHHHHHHHHHHHHHHHHHHHHHhcccccCHHHHHHHH
Confidence 3345555555555566556666778777889999888 99999999999999999999999984 33433333
Q ss_pred -HHHHHHHHHHHHHhhhhHHHHHHHHHHhhhcccchhhH-HHHhhhhccccchhhHHHHHHHHhHHHHHHHHhHHHHhhh
Q 011783 118 -GTASVVIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQ 195 (477)
Q Consensus 118 -~~~~~~i~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~ 195 (477)
+.++.+++.++....++++.+++.+++.|++.+...+. .+++.|.+|++++++.+++++....+|..+||.++|.+.+
T Consensus 315 ~~~~~~~l~~ll~~~~~~~~~~~i~~~~~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~igp~i~G~l~~ 394 (455)
T TIGR00892 315 FALLFNGLTHLLCALAGDYTGLVIYCIFFGLSFGSVGALLFEVLMDLVGAQRFSSAVGLVTIVECCAVLIGPPLAGRLVD 394 (455)
T ss_pred HHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHhchHHHHHHHHHHHHhhHHHHhhHHhHHHHHHHHHHHccccceeeeeh
Confidence 34444555556667889999999999999998888777 8999999999999999999999999999999999999988
Q ss_pred ccccCCcccc
Q 011783 196 PAEKYPNLFS 205 (477)
Q Consensus 196 ~~~~~~~~~~ 205 (477)
...+|++.|.
T Consensus 395 ~~g~~~~~f~ 404 (455)
T TIGR00892 395 ATKNYKYIFY 404 (455)
T ss_pred hcCCcchHHH
Confidence 5444554443
No 131
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=99.51 E-value=3.7e-14 Score=114.19 Aligned_cols=108 Identities=32% Similarity=0.582 Sum_probs=100.3
Q ss_pred HHHHHHHHHHHhhhhhhhhhhcCCchhhHHHHHHHHHHHHHHHhhhhHHHHHHHHHHhhhcccchhhH-HHHhhhhcccc
Q 011783 88 GSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREE 166 (477)
Q Consensus 88 ~s~~~~~~~~~~~~~G~l~Dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~-~~~i~~~~~~~ 166 (477)
.+.+.++..+++++.|++.||+|||+.+..+.....++.+.....++++.+.+.+++.|++.+...+. .+++.|.+|++
T Consensus 4 ~~~~~~~~~~~~~~~g~~~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 83 (141)
T TIGR00880 4 LAGYALGQLIYSPLSGLLTDRFGRKPVLLVGLFIFVLSTAMFALSSNITVLIIARFLQGFGAAFALVAGAALIADIYPPE 83 (141)
T ss_pred EEeehhHHHHHHhhHHHHHhhcchhHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhHHHHHHHHCChh
Confidence 44567788899999999999999999999999999999998888899999999999999998888777 89999999999
Q ss_pred chhhHHHHHHHHhHHHHHHHHhHHHHhhh
Q 011783 167 HQALGLSTVSTAWGIGLIIGPALGGFLAQ 195 (477)
Q Consensus 167 ~r~~~~~~~~~~~~~g~~~g~~~~~~l~~ 195 (477)
+|++..++.+....+|..++|.+++.+.+
T Consensus 84 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 112 (141)
T TIGR00880 84 ERGVALGLMSAGIALGPLLGPPLGGVLAQ 112 (141)
T ss_pred hhhHHHHHHHHhHHHHHHHhHHhHHHHhc
Confidence 99999999999999999999999999886
No 132
>PRK09528 lacY galactoside permease; Reviewed
Probab=99.50 E-value=8.1e-14 Score=134.33 Aligned_cols=120 Identities=18% Similarity=0.138 Sum_probs=107.0
Q ss_pred hHHHHHHHHHHHHHHhhhhhhhhhhcCCchhhHHHHHHHHHHHHHHHhhhhHHHHHHHHHHhhhcccchhhH-HHHhhhh
Q 011783 84 AGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEI 162 (477)
Q Consensus 84 ~g~~~s~~~~~~~~~~~~~G~l~Dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~-~~~i~~~ 162 (477)
.|++.++..++..++.+++|++.||+|||+.+..+.++.+++.++.+++++.+.+++.+++.|++.+...+. ..++.|.
T Consensus 264 ~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~l~~~~~~l~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~ 343 (420)
T PRK09528 264 FGYLNSFQVFLEALIMFFAPFIINRIGAKNALLLAGTIMAVRIIGSGFATGPLEVSILKLLHAFEVPFLLVGVFKYITLN 343 (420)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCcchhhHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 899999999999999999999999999999999999999999888888999999999999999988776666 8899999
Q ss_pred ccccchhhHHHH-HHHHhHHHHHHHHhHHHHhhhccccCCccccccccc
Q 011783 163 FREEHQALGLST-VSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSESLF 210 (477)
Q Consensus 163 ~~~~~r~~~~~~-~~~~~~~g~~~g~~~~~~l~~~~~~~~~~~~~~~~~ 210 (477)
+|++.|+...+. ++....+|.+++|.+.|++.+ .++|+..|
T Consensus 344 ~~~~~~a~~~~~~~~~~~~lg~~ig~~~~G~l~~-------~~G~~~~f 385 (420)
T PRK09528 344 FDVRLSATIYLVGFQFAKQLGAVFLSTLAGNLYD-------SIGFQGTY 385 (420)
T ss_pred cCccceeeeeeehHHHHHHHHHHHHHHHHHHHHH-------hhCchHHH
Confidence 999999888765 677888999999999999998 45666655
No 133
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=99.50 E-value=4.5e-13 Score=127.32 Aligned_cols=149 Identities=12% Similarity=0.063 Sum_probs=132.1
Q ss_pred hHHHHHHHHHHHhhhchhchHhHHHHHHHHhcccccchhhhhhhHHHHHHHHHHHHHHhhhhhhhhhhcCCchhhHHHHH
Q 011783 41 TELFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTA 120 (477)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~Grr~~~~~~~~ 120 (477)
++++...+..++............|.+.+|+|.++.+ +|++.+...++..++.++.|++.||+|+|+.+.++.+
T Consensus 205 ~~~~~~l~~~~l~~~~~~~~~~~~~~~l~~~g~s~~~------~g~l~~~~~~~~i~~~~~~~~l~~r~g~~~~l~~~~~ 278 (382)
T TIGR00902 205 PMNLRFLAAVCLIQGAHAAYYGFSAIYWQAAGISASA------TGLLWGIGVLAEIIIFAFSNKLFQNCSARDLLLISAI 278 (382)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHhH------HHHHHHHHHHHHHHHHHHhHHHHhhCCHHHHHHHHHH
Confidence 4455555566666666666777788777889999999 9999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhhhHHHHHHHHHHhhhcccchhhH-HHHhhhhccccchhhHHHHHH-HHhHHHHHHHHhHHHHhhhc
Q 011783 121 SVVIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVS-TAWGIGLIIGPALGGFLAQP 196 (477)
Q Consensus 121 ~~~i~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~-~~~~~g~~~g~~~~~~l~~~ 196 (477)
...+..++.+++++.+.+++.+++.|+..+...+. ..++.+. |+++|++..++++ ...++|..+||.++|++.++
T Consensus 279 ~~~~~~~~~~~~~~~~~~~~~q~l~g~~~~~~~~~~~~~i~~~-~~~~~~~~q~~~~~~~~g~g~~~g~~~~G~l~~~ 355 (382)
T TIGR00902 279 ACVGRWAIIGAIEAFPLIFLLQILHCGTFAVCHLAAMRYIAAQ-PGSEIAKLQALYNALAMGGLIAIFTAFAGFIYPT 355 (382)
T ss_pred HHHHHHHHHHhHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-CHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999998888 9999988 9999999999986 57889999999999999983
No 134
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=99.49 E-value=7.7e-13 Score=126.77 Aligned_cols=133 Identities=19% Similarity=0.198 Sum_probs=112.8
Q ss_pred hchhchHhHHHHHHHHhcccccchhhhhhhHHHHHHHHHHHHHHhhhhhhhhhhcCCchhhHHHHHHHHHHHHHHHhhhh
Q 011783 55 LPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLSVN 134 (477)
Q Consensus 55 ~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~Grr~~~~~~~~~~~i~~~~~~~~~~ 134 (477)
+........+|.+.++.|. ++ .++..+.+.++..++.++.|++.||+|||+.+..+..+.+++.++..+.++
T Consensus 230 ~~~~~~~~~~~~~~~~~~~--~~------~~~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (399)
T PRK05122 230 IGFGTIATFITLYYAARGW--DG------AALALTLFGVAFVGARLLFGNLINRLGGLRVAIVSLLVEILGLLLLWLAPS 301 (399)
T ss_pred HHHHHHHHHHHHHHHHccc--cc------chHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhcc
Confidence 3344455566665566665 34 567778888999999999999999999999999999888888888888888
Q ss_pred HHHHHHHHHHhhhcccchhhH-HHHhhhhccccchhhHHHHHHHHhHHHHHHHHhHHHHhhh
Q 011783 135 FWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQ 195 (477)
Q Consensus 135 ~~~l~~~r~l~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~ 195 (477)
.+.+++.+++.|++.+...+. ...+.|.+|+++|+++.++++....+|..++|.+.|.+.+
T Consensus 302 ~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~ 363 (399)
T PRK05122 302 PWMALIGAALTGFGFSLVFPALGVEAVKRVPPQNRGAALGAYSVFLDLSLGITGPLAGLVAS 363 (399)
T ss_pred HHHHHHHHHHHHHhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 888889999999998887776 7788899999999999999999999999999999999987
No 135
>PRK11663 regulatory protein UhpC; Provisional
Probab=99.48 E-value=4e-12 Score=122.90 Aligned_cols=167 Identities=13% Similarity=0.061 Sum_probs=126.6
Q ss_pred HHHHHHHHHHhhhhhhHHHHHHhhcCcccCCccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHH
Q 011783 277 SSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTI 356 (477)
Q Consensus 277 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 356 (477)
..++.+++..+....+....|.+.. ++|+++.+.|++.+...++..++++ ..+++.||+|+|+.+..+.++..
T Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~~~------~~g~s~~~~g~~~~~~~~~~~~~~~-~~G~l~dr~g~r~~~~~~~~~~~ 99 (434)
T PRK11663 27 TMYLGYALFYFTRKSFNAAMPEMLA------DLGLSRSDIGLLATLFYITYGVSKF-VSGIVSDRSNARYFMGIGLIATG 99 (434)
T ss_pred HHHHHHHHHHHhhhhHHHhhHHHHH------hcCCCHHHHHHHHHHHHHHHHHHHh-hhhHHHhhcCCchhHHHHHHHHH
Confidence 3344444444433444555555443 3899999999999999999999998 89999999999999999988888
Q ss_pred HHHHHHHHHHHhhhhhHHHHHHHHHHHHhhhhHHHHhHHHHHHhhcCCcchhhHHhHHHHHHHHHHHHHhhhHHHHHHHH
Q 011783 357 PLLTSYPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIAMTGMSLFKAAGPAGGGALFSW 436 (477)
Q Consensus 357 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~ 436 (477)
++.+...+..+. ..+.+..++.+++.+...+....++.+.+|+++|++++|+.+....+|..++|.+.+.+.+.
T Consensus 100 ~~~~~~~~~~~~------~~l~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~l~~~ 173 (434)
T PRK11663 100 IINILFGFSSSL------WAFALLWVLNAFFQGWGWPVCAKLLTAWYSRTERGGWWAIWNTAHNVGGALIPLVVGAIALH 173 (434)
T ss_pred HHHHHHHHHhHH------HHHHHHHHHHHHHHHccchHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 887766554431 12222233344555666777888999999999999999999999999999999999999887
Q ss_pred hhhhccccCCCCchHHHHHHHHHHHHHHHH
Q 011783 437 AQKRLDASFLPGSQMVFFVLNVVEAIGVLM 466 (477)
Q Consensus 437 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 466 (477)
. ||+..|.+.+++.++..+.
T Consensus 174 ~----------gw~~~f~~~~i~~~~~~~~ 193 (434)
T PRK11663 174 Y----------GWRYGMMIAGIIAIVVGLF 193 (434)
T ss_pred c----------cHHHHHHHHHHHHHHHHHH
Confidence 6 8999999887766554433
No 136
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=99.48 E-value=1.1e-12 Score=124.52 Aligned_cols=131 Identities=17% Similarity=0.307 Sum_probs=109.4
Q ss_pred hchHhHHH-HHHHHhcccccchhhhhhhHHHHHHHHHHHHHHhhhhhhhhhhcCCchhhHHHHHHHHHHHHHHHhhhhHH
Q 011783 58 SSLFPFLY-FMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLSVNFW 136 (477)
Q Consensus 58 ~~~~~~~~-~~~~~~~~s~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~ 136 (477)
.......| .+.+++|.++.+ .+++.+.......++.++.|++.||+|||+++.++.++..+......+.++.+
T Consensus 216 ~~~~~~~~~~~~~~~g~~~~~------~g~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 289 (375)
T TIGR00899 216 ILYIINMPLLIIHELGLPDKL------AGLMMGTAAGLEIPFMLLAGYLIKRFGKRRLMLLAALAGVAFYTGLAADNSLW 289 (375)
T ss_pred HHHHhhhHHHHHHHcCCCHHH------HHHHHHHHHHHHHHHHHhHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33344455 455778999888 88888888777888899999999999999999888877776666666778888
Q ss_pred HHHHHHHHhhhcccchhhH-HHHhhhhccccchhhHHHHHHHHhHHHHHHHHhHHHHhhh
Q 011783 137 MAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQ 195 (477)
Q Consensus 137 ~l~~~r~l~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~ 195 (477)
.+++.+++.|++.+...+. ..++.|..|+ +|++++++++....+|..++|.++|.+.+
T Consensus 290 ~~~~~~~~~g~~~g~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~g~~~~g~~~~ 348 (375)
T TIGR00899 290 ALLMLQLLNAIFIGILAGIGMLYFQDLMPG-RAGAATTLYTNTGRVGWIIAGSVGGILAE 348 (375)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCcc-hhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8888999999988887777 8888998875 56799999999999999999999999988
No 137
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=99.48 E-value=2.2e-12 Score=123.04 Aligned_cols=148 Identities=11% Similarity=0.023 Sum_probs=113.4
Q ss_pred HHHHHHHHHHhhhchhchHhHHHHHHHHhcccccchhhhhhhHHHHHHHHHHHHHHhhhhhhhhhhcCCchhhHHHHHHH
Q 011783 43 LFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASV 122 (477)
Q Consensus 43 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~Grr~~~~~~~~~~ 122 (477)
.+.+.+..++...........+|.+.+++|.+..+ .|...+.+.++..++.+..|++.||+|||+.+..+..+.
T Consensus 207 ~~~l~~~~~~~~~~~~~~~~~lp~~l~~~g~s~~~------ag~~~~~~~i~~i~g~~~~g~l~~r~~~~~~~~~~~~l~ 280 (393)
T PRK09705 207 AWTLGVYFGLINGGYASLIAWLPAFYIEIGASAQY------SGSLLALMTLGQAAGALLMPAMARHQDRRKLLMLALVLQ 280 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChhh------hhHHHHHHHHHHHHHHHHHHHHHhhccchHHHHHHHHHH
Confidence 34344444444555556666778777789999988 999999999999999999999999999999999988777
Q ss_pred HHHHHHHHhhh-hHHHHHHHHHHhhhcccchhhH-HHHhhhhcc-ccchhhHHHHHHHHhHHHHHHHHhHHHHhhhccc
Q 011783 123 VIFNTLFGLSV-NFWMAVLTRFLLGSLNGLLGPI-KAYACEIFR-EEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAE 198 (477)
Q Consensus 123 ~i~~~~~~~~~-~~~~l~~~r~l~G~~~g~~~~~-~~~i~~~~~-~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~ 198 (477)
.++..+....+ +...+. -++.|++.+...|. .....+..+ +++|++..++.+....++..++|.+.|++.+..+
T Consensus 281 ~~~~~~~~~~~~~~~~~~--~~l~g~g~g~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~gp~~~G~l~~~~g 357 (393)
T PRK09705 281 LVGFCGFIWLPLQLPVLW--AMVCGLGLGGAFPLCLLLALDHSVQPAIAGKLVAFMQGIGFIIAGLAPWFSGVLRSISG 357 (393)
T ss_pred HHHHHHHHHccchHHHHH--HHHHHHhccchHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 77766554323 222222 24567877776666 666667764 6789999999999999999999999999998543
No 138
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=99.47 E-value=8e-12 Score=119.33 Aligned_cols=169 Identities=14% Similarity=0.056 Sum_probs=131.1
Q ss_pred HHHHHHHHHHHhhhhhhHHHHHHhhcCcccCCccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHH
Q 011783 276 MSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLT 355 (477)
Q Consensus 276 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 355 (477)
+..+...++..........+.+.|+.+. .|+++.+.|+..+...+...+.++ +.+++.||+|||+.+..+..+.
T Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~g~s~~~~gl~~~~~~l~~~~~~~-~~G~l~dr~g~k~~l~~~~~~~ 86 (400)
T PRK11646 13 YFLLIDNMLVVLGFFVVFPLISIRFVDQ-----LGWAAVMVGIALGLRQFIQQGLGI-FGGAIADRFGAKPMIVTGMLMR 86 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH-----hCCcHHHHHHHHHHHHHHHHHHHh-hhhHHHHHhCchHHHHHHHHHH
Confidence 3344555555555566666667665433 899999999999999999888887 8899999999999999999988
Q ss_pred HHHHHHHHHHHHhhhhhHHHHHHHHHHHHhhhhHHHHhHHHHHHhhcCCcchhhHHhHHHHHHHHHHHHHhhhHHHHHHH
Q 011783 356 IPLLTSYPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIAMTGMSLFKAAGPAGGGALFS 435 (477)
Q Consensus 356 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~ 435 (477)
.++.+......+ .+ .+.+...+.+++.+...+...+++.+.+|+++|+++.|+.+...++|..+||.++|.+.
T Consensus 87 ~~~~~~~~~~~~-----~~-~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~g~l~- 159 (400)
T PRK11646 87 AAGFATMAIAHE-----PW-LLWLSCILSGLGGTLFDPPRTALVIKLIRPHQRGRFFSLLMMQDSAGAVIGALLGSWLL- 159 (400)
T ss_pred HHHHHHHHHhcc-----HH-HHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-
Confidence 888777655432 11 23333444456666677888888999999999999999999999999999999999998
Q ss_pred HhhhhccccCCCCchHHHHHHHHHHHHHHHHH
Q 011783 436 WAQKRLDASFLPGSQMVFFVLNVVEAIGVLMT 467 (477)
Q Consensus 436 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 467 (477)
.. ||+..|++.+++.++..++.
T Consensus 160 ~~----------g~~~~f~~~~~~~~~~~i~~ 181 (400)
T PRK11646 160 QY----------DFRLVCATGAVLFVLAAAFN 181 (400)
T ss_pred Hh----------hHHHHHHHHHHHHHHHHHHH
Confidence 44 78899988887766665443
No 139
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=99.46 E-value=6.4e-12 Score=118.83 Aligned_cols=173 Identities=16% Similarity=0.169 Sum_probs=133.6
Q ss_pred HHHHHHHHhhhhhhHHHHHHhhcCcccCCccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHH
Q 011783 279 IIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTIPL 358 (477)
Q Consensus 279 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 358 (477)
....++...........+|.|..+ .+.++.+.+++.+...++..++++ ..+++.||+|||+.+..+..+..++
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~------~~~s~~~~g~~~~~~~~~~~i~~~-~~G~l~dr~g~r~~~~~~~~~~~~~ 77 (365)
T TIGR00900 5 FAAQLISLIGTAITQVALPLYVLA------GTGSASVLSLAALAGMLPYVVLSP-IAGALADRYDRKKVMIGADLIRAVL 77 (365)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH------hhccHHHHHHHHHHHHHHHHHHHH-hhhHHHHhhchhHHHHHHHHHHHHH
Confidence 344455555555566666766654 688999999999999999999988 8899999999999999988877777
Q ss_pred HHHHHHHHHhhhhhHHHHHHHHHHHHhhhhHHHHhHHHHHHhhcCCcchhhHHhHHHHHHHHHHHHHhhhHHHHHHHHhh
Q 011783 359 LTSYPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIAMTGMSLFKAAGPAGGGALFSWAQ 438 (477)
Q Consensus 359 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~~ 438 (477)
.....+....... ....+.+..++.+++.+...+...++..|.+|+++|++++|+.+....+|..++|.+++.+.+..
T Consensus 78 ~~~~~~~~~~~~~-~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~- 155 (365)
T TIGR00900 78 VAVLPFVALLGGL-NIWQVYVLAGILAIAQAFFTPAYQAMLPDLVPEEQLTQANSLSQAVRSLFYIVGPGIGGLMYATL- 155 (365)
T ss_pred HHHHHHHHHcCCC-cHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHh-
Confidence 6665555422111 12233444455567778888889999999999999999999999999999999999999999887
Q ss_pred hhccccCCCCchHHHHHHHHHHHHHHHHHhh
Q 011783 439 KRLDASFLPGSQMVFFVLNVVEAIGVLMTFK 469 (477)
Q Consensus 439 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 469 (477)
||+..|++.++..+++.+....
T Consensus 156 ---------g~~~~~~~~~~~~~~~~~~~~~ 177 (365)
T TIGR00900 156 ---------GIKWAIWVDAVGFAISALLIVS 177 (365)
T ss_pred ---------hHHHHHHHHHHHHHHHHHHHHh
Confidence 8889998887766666554443
No 140
>PRK10489 enterobactin exporter EntS; Provisional
Probab=99.46 E-value=2.9e-12 Score=123.50 Aligned_cols=188 Identities=14% Similarity=0.049 Sum_probs=140.1
Q ss_pred chhhhhhcchhhHHHHHHHHHHHhhhhhhHHHHHHhhcCcccCCccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 011783 264 TPKKSLLKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILG 343 (477)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~ 343 (477)
.+.+.+.+++.++...+..++..+.........|.+..+ .+.++.+.|+..+...++..++++ +.+++.||+|
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~s~~~~g~~~~~~~l~~~~~~~-~~G~l~dr~g 80 (417)
T PRK10489 8 LDLSLLKTHPAFRAVFIARFISIFGLGLLGVAVPVQIQM------MTGSTLQVGLSVTLTGGAMFIGLM-VGGVLADRYD 80 (417)
T ss_pred HHHHHHHhCCChhhHHHHHHHHHHHHHHHHHHHHHHHHH------HHCCHHHHHHHHHHHHHHHHHHHH-hhHHHhhhcC
Confidence 345556678888887777777776666666677766654 567899999999999999999998 8999999999
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhhhhHHHHhHHHHHHhhcCCcchhhHHhHHHHHHHHHHH
Q 011783 344 PIMVARIAGVLTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIAMTGMSLFK 423 (477)
Q Consensus 344 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~ 423 (477)
||+.+..+..+..++............. ....+.+..++.+++.+...+...+...+.+|+++|+++.++.+....+|.
T Consensus 81 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 159 (417)
T PRK10489 81 RKKLILLARGTCGLGFIGLALNAFLPEP-SLLAIYLLGLWDGFFGSLGVTALLAATPALVGRENLMQAGAITMLTVRLGS 159 (417)
T ss_pred CceEEEehHHHHHHHHHHHHHHHHcCCC-cHHHHHHHHHHHHHHHHHHHHHHhhhhhhccCHHHHHHHHHHHHHHHhHHH
Confidence 9999888777666665544322111111 112233344444555666677778888999999999999999999999999
Q ss_pred HHhhhHHHHHHHHhhhhccccCCCCchHHHHHHHHHHHHHHHHHhh
Q 011783 424 AAGPAGGGALFSWAQKRLDASFLPGSQMVFFVLNVVEAIGVLMTFK 469 (477)
Q Consensus 424 ~~~~~~~g~l~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 469 (477)
.+||.++|.+.+.. +|++.|++.++..+++.++...
T Consensus 160 ~~g~~l~g~l~~~~----------~~~~~~~~~~~~~~~~~~~~~~ 195 (417)
T PRK10489 160 VISPALGGLLIAAG----------GVAWNYGLAAAGTFITLLPLLR 195 (417)
T ss_pred HhHHHHHHHHHHHH----------hhHHHHHHHHHHHHHHHHHHHh
Confidence 99999999999877 7888888877777666555443
No 141
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=99.46 E-value=1.2e-12 Score=125.93 Aligned_cols=149 Identities=19% Similarity=0.263 Sum_probs=119.4
Q ss_pred hhhchhchHhHHHHHHHHhcccccchhhhhhhHHHHHHHHHHHHHHhhhhhhhhhhcCCchhhHHHHHHHHHHHHHHHhh
Q 011783 53 TALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLS 132 (477)
Q Consensus 53 ~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~Grr~~~~~~~~~~~i~~~~~~~~ 132 (477)
.........+.++.+.++.+.+..+ .....+.+.++..++..++.+..|+++||+|||+.+..+.++..++.+...+.
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~g~~~~~~~l~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~ 308 (408)
T PRK09874 231 IQVATGSIAPILTLYVRELAGNVSN--IAFISGMIASVPGVAALLSAPRLGKLGDRIGPEKILITALIFSVLLLIPMSFV 308 (408)
T ss_pred HHHHHHHHHHHHHHHHHHHhccchH--HHHHHHHHHHHHHHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHHHh
Confidence 3344445566677666665433322 11225667777888889999999999999999999999998888888877778
Q ss_pred hhHHHHHHHHHHhhhcccchhhH-HHHhhhhccccchhhHHHHHHHHhHHHHHHHHhHHHHhhhccccCCccccccccc
Q 011783 133 VNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSESLF 210 (477)
Q Consensus 133 ~~~~~l~~~r~l~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~~~~~~~~ 210 (477)
++.+.+++.+++.|++.+...|. .+++.+..|+++|++.+++.+....+|..+||.++|.+.+ .++|+..|
T Consensus 309 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~gp~~~G~l~~-------~~g~~~~f 380 (408)
T PRK09874 309 QTPLQLGILRFLLGAADGALLPAVQTLLVYNSSNQIAGRIFSYNQSFRDIGNVTGPLMGAAISA-------NYGFRAVF 380 (408)
T ss_pred ccHHHHHHHHHHHHhhhHhhHHHHHHHHHHhCCcccceeeehHHHHHHHHHHHhhHHHHHHHHh-------hcchhHHH
Confidence 88888999999999999988887 8888999999999999999999999999999999999987 44555555
No 142
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=99.46 E-value=1.5e-12 Score=122.30 Aligned_cols=143 Identities=23% Similarity=0.357 Sum_probs=127.5
Q ss_pred HHHHHHhhhchhchHhHHHHHHHHh-cccccchhhhhhhHHHHHHHHHHHHHHhhhhhhhhhhcCCch-hhHHHHHHHHH
Q 011783 47 WIIVLCTALPISSLFPFLYFMIKDF-QIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKP-VIIMGTASVVI 124 (477)
Q Consensus 47 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~s~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~Grr~-~~~~~~~~~~i 124 (477)
.+..+.............|.+.++. |.++.+ .++..+...++..++.++.|++.||+|||+ .+..+..+..+
T Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i 254 (352)
T cd06174 181 ALAFFLLSFGYYGLLTYLPLYLQEVLGLSAAE------AGLLLSLFGLGGILGALLGGLLSDRLGRRRLLLLIGLLLAAL 254 (352)
T ss_pred HHHHHHHHhHHHHHHHHHHHHHHHhcCCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHH
Confidence 3334444555566667777666665 888888 999999999999999999999999999999 99999999999
Q ss_pred HHHHHHhhhhHHHHHHHHHHhhhcccchhhH-HHHhhhhccccchhhHHHHHHHHhHHHHHHHHhHHHHhhh
Q 011783 125 FNTLFGLSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQ 195 (477)
Q Consensus 125 ~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~ 195 (477)
+.+.....++.+.+.+..++.|++.+...+. .+++.|..|+++|++.+++.+....+|..++|.+.+.+.+
T Consensus 255 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~g~l~~ 326 (352)
T cd06174 255 GLLLLALAPSLALLLVALLLLGFGLGFAFPALLTLASELAPPEARGTASGLFNTFGSLGGALGPLLAGLLLD 326 (352)
T ss_pred HHHHHHHhccHHHHHHHHHHHHHHHhccchhHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 9999999999999999999999999988887 9999999999999999999999999999999999999987
No 143
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=99.44 E-value=2.1e-11 Score=111.61 Aligned_cols=175 Identities=18% Similarity=0.169 Sum_probs=147.8
Q ss_pred hHHHHHHHHHHHhhhhhhHHHHHHhhcCcccCCccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHH
Q 011783 275 LMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVL 354 (477)
Q Consensus 275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 354 (477)
++.+.+..+......+.....+|....+ +|.|..++|.+.+.+..+..++++ +...+.+|++||+.+...+.+
T Consensus 15 l~aLa~~~F~igttEfv~~gLLp~iA~d------l~vs~~~aG~lis~yAl~~ai~ap-~l~~lt~r~~Rr~lLl~~l~l 87 (394)
T COG2814 15 LLALALAAFAIGTTEFVPVGLLPPIAAD------LGVSEGAAGQLITAYALGVALGAP-LLALLTGRLERRRLLLGLLAL 87 (394)
T ss_pred HHHHHHHHHHHHhHHHHHHhchHHHHHH------cCCCHHHHHHHHHHHHHHHHHHHH-HHHHHHcccchHHHHHHHHHH
Confidence 4444555555555666666666655544 899999999999999999999999 778999999999999999999
Q ss_pred HHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhhhhHHHHhHHHHHHhhcCCcchhhHHhHHHHHHHHHHHHHhhhHHHHHH
Q 011783 355 TIPLLTSYPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIAMTGMSLFKAAGPAGGGALF 434 (477)
Q Consensus 355 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~ 434 (477)
..++-++..+.++.. .+.+.=++.++..+..++...++..+.+|+++|+++.++..+...++..+|..++.++-
T Consensus 88 Fi~~n~l~alAp~f~------~Ll~aR~~~g~a~G~f~~i~~~~a~~lvpp~~~~~Aiaiv~~G~tlA~v~GvPLGt~ig 161 (394)
T COG2814 88 FIVSNLLSALAPSFA------VLLLARALAGLAHGVFWSIAAALAARLVPPGKRGRALALVFTGLTLATVLGVPLGTFLG 161 (394)
T ss_pred HHHHHHHHHHhccHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHcCccchhhHHHHHHHHHHHHHHHhccHHHHHH
Confidence 999988887776633 45555566677888899999999999999999999999999999999999999999999
Q ss_pred HHhhhhccccCCCCchHHHHHHHHHHHHHHHHHhhhhhh
Q 011783 435 SWAQKRLDASFLPGSQMVFFVLNVVEAIGVLMTFKPFLA 473 (477)
Q Consensus 435 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 473 (477)
|.. ||+.+|++.+++.+++.+..+. .+|
T Consensus 162 ~~~----------GWR~~F~~ia~l~ll~~~~~~~-~lP 189 (394)
T COG2814 162 QLF----------GWRATFLAIAVLALLALLLLWK-LLP 189 (394)
T ss_pred HHh----------hHHHHHHHHHHHHHHHHHHHHH-hCC
Confidence 999 9999999999999998887766 455
No 144
>PRK03699 putative transporter; Provisional
Probab=99.44 E-value=3.4e-12 Score=121.91 Aligned_cols=147 Identities=11% Similarity=0.109 Sum_probs=118.3
Q ss_pred HHHHHHHHHHHhhhchhchHhHHHHHH-HHhcccccchhhhhhhHHHHHHHHHHHHHHhhhhhhhhhhcCCchhhHHHHH
Q 011783 42 ELFSIWIIVLCTALPISSLFPFLYFMI-KDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTA 120 (477)
Q Consensus 42 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~s~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~Grr~~~~~~~~ 120 (477)
.++.+.+..++.......+...+|.+. +++|.+..+ .+++.+.+.++..++.+..|+++||+|||+.+.....
T Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~------~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~l~~~~~ 279 (394)
T PRK03699 206 GVLFLAIAALLYILAQLTFISWVPEYAQKKFGMSLED------AGNLVSNFWMAYMVGMWIFSFIVRFFDLQRILTVLAG 279 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHH------hhHHHHHHHHHHHHHHHHHHHHHHHhchhhHHHHHHH
Confidence 344444555555555555667778655 668999998 9999999999999999999999999999999998887
Q ss_pred HHHHHHHHHHhhhhHHHHHHHHHHhhhcccchhhH-HHHhhhhccccchhhHHHHHHHHhHHHHHHHHhHHHHhhh
Q 011783 121 SVVIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQ 195 (477)
Q Consensus 121 ~~~i~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~ 195 (477)
+..+...+....++.+.+.+..++.|++.+...+. .++..|..| +++++..+.......+|..++|.+.|++.+
T Consensus 280 ~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~i~p~~~G~l~~ 354 (394)
T PRK03699 280 LALVLMYLFVNTDDPSHLLYAILGLGFFSSAIYTTIITLGSQQTK-VASPKLVNFILTCGTIGTMLTFVVTSPIVA 354 (394)
T ss_pred HHHHHHHHHHHcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHcc-CCCHHHHHHHHHhhhHHHHHHHHHHHHHHH
Confidence 77777777667777777777788889877766666 777777765 556788898888999999999999999998
No 145
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=99.44 E-value=2.3e-11 Score=115.97 Aligned_cols=144 Identities=16% Similarity=0.075 Sum_probs=119.5
Q ss_pred CccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhh
Q 011783 307 GGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNL 386 (477)
Q Consensus 307 ~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 386 (477)
+++|+++.+.+...+...++..++++ +.+++.||+|||+.+..+..+..++.+...+..+ ...+.+.-++.++
T Consensus 48 ~~~g~s~~~~g~~~~~~~~~~~~~~~-~~g~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~------~~~l~~~r~l~G~ 120 (394)
T PRK10213 48 QDLGISEGVAGQSVTVTAFVAMFASL-FITQTIQATDRRYVVILFAVLLTLSCLLVSFANS------FSLLLIGRACLGL 120 (394)
T ss_pred HHcCCCHHHHHHHHHHHHHHHHHHHH-HHHHHhcccCcHHHHHHHHHHHHHHHHHHHHHCh------HHHHHHHHHHHHH
Confidence 44899999999999999999999988 8899999999999999999988887766655432 1133344455567
Q ss_pred hhHHHHhHHHHHHhhcCCcchhhHHhHHHHHHHHHHHHHhhhHHHHHHHHhhhhccccCCCCchHHHHHHHHHHHHHHHH
Q 011783 387 LSVSIITGLFILQNRAVDQDQRGAANGIAMTGMSLFKAAGPAGGGALFSWAQKRLDASFLPGSQMVFFVLNVVEAIGVLM 466 (477)
Q Consensus 387 ~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 466 (477)
+.+...+....++.|.+|+++|+++.++.....++|..++|.+++.+.+.. ||+..|++.+++.++..+.
T Consensus 121 ~~g~~~~~~~~~i~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~~~l~~~~----------gw~~~f~~~~~l~~~~~l~ 190 (394)
T PRK10213 121 ALGGFWAMSASLTMRLVPPRTVPKALSVIFGAVSIALVIAAPLGSFLGELI----------GWRNVFNAAAVMGVLCIFW 190 (394)
T ss_pred hhHHHHHHHHHHHHHHcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc----------CHHHHHHHHHHHHHHHHHH
Confidence 777788888999999999999999999999999999999999999999887 8999999888776665544
Q ss_pred H
Q 011783 467 T 467 (477)
Q Consensus 467 ~ 467 (477)
.
T Consensus 191 ~ 191 (394)
T PRK10213 191 I 191 (394)
T ss_pred H
Confidence 3
No 146
>PRK12382 putative transporter; Provisional
Probab=99.43 E-value=3.4e-12 Score=121.98 Aligned_cols=141 Identities=21% Similarity=0.254 Sum_probs=118.0
Q ss_pred hchhchHhHHHHHHHHhcccccchhhhhhhHHHHHHHHHHHHHHhhhhhhhhhhcCCchhhHHHHHHHHHHHHHHHhhhh
Q 011783 55 LPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLSVN 134 (477)
Q Consensus 55 ~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~Grr~~~~~~~~~~~i~~~~~~~~~~ 134 (477)
..........|.+.++.+.+ + .++..+.+.++..+++++.|++.||+|||+.+..+..+.+++.++..+.++
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~--~------~~~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~ 301 (392)
T PRK12382 230 VGFAVIGTFVSLYFASKGWA--M------AGFTLTAFGGAFVLMRVLFGWMPDRFGGVKVAIVSLLVETVGLLLLWLAPT 301 (392)
T ss_pred HHHhHHHHHHHHHHHhcCCc--h------hHHHHHHHHHHHHHHHHHHHHHHHhcCCCeehHHHHHHHHHHHHHHHHccc
Confidence 33444555666666666554 3 566677788888999999999999999999999999999888888888888
Q ss_pred HHHHHHHHHHhhhcccchhhH-HHHhhhhccccchhhHHHHHHHHhHHHHHHHHhHHHHhhhccccCCccccccccc
Q 011783 135 FWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSESLF 210 (477)
Q Consensus 135 ~~~l~~~r~l~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~~~~~~~~ 210 (477)
.+.+++.+++.|++.+...+. .+.+.|.+|+++|+++.++++....+|..+||.+.+.+.+ .++|+..+
T Consensus 302 ~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~-------~~g~~~~~ 371 (392)
T PRK12382 302 AWVALAGAALTGAGCSLIFPALGVEVVKRVPSQVRGTALGGYAAFQDIAYGVSGPLAGMLAT-------SFGYPSVF 371 (392)
T ss_pred HHHHHHHHHHHHHHHHhHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------HhCchHHH
Confidence 888888999999998887777 8888999999999999999999999999999999999998 45565555
No 147
>PRK03545 putative arabinose transporter; Provisional
Probab=99.43 E-value=1.8e-11 Score=116.81 Aligned_cols=147 Identities=16% Similarity=0.110 Sum_probs=119.7
Q ss_pred CCccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHh
Q 011783 306 LGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTIPLLTSYPYIAMLSGFGLAFLLNCASVVKN 385 (477)
Q Consensus 306 ~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 385 (477)
.+++|.++.+.|+..+...++..+++. ..+++.||+|||+.+..+..+..++.+...+..+. + .+.+.-++.+
T Consensus 36 ~~~~~~s~~~~g~~~~~~~~~~~~~~~-~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~-----~-~l~~~r~~~G 108 (390)
T PRK03545 36 AQSFHMQTAQVGLMLTIYAWVVALMSL-PLMLLTSNVERRKLLIGLFVLFIASHVLSALAWNF-----T-VLLISRIGIA 108 (390)
T ss_pred HhHcCCCHHHHHHHHHHHHHHHHHHHH-HHHHHHcCCChHHHHHHHHHHHHHHHHHHHHhccH-----H-HHHHHHHHHH
Confidence 345899999999999999999988888 67899999999999999988888877766554331 1 2333334455
Q ss_pred hhhHHHHhHHHHHHhhcCCcchhhHHhHHHHHHHHHHHHHhhhHHHHHHHHhhhhccccCCCCchHHHHHHHHHHHHHHH
Q 011783 386 LLSVSIITGLFILQNRAVDQDQRGAANGIAMTGMSLFKAAGPAGGGALFSWAQKRLDASFLPGSQMVFFVLNVVEAIGVL 465 (477)
Q Consensus 386 ~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 465 (477)
...+...+...+++.+..|+++|++++|+......+|..++|.+.+.+.++. ||+..|++.+++.++..+
T Consensus 109 ~~~~~~~~~~~~~i~~~~~~~~r~~~~g~~~~~~~~g~~ig~~l~~~l~~~~----------gw~~~f~~~~~~~~l~~~ 178 (390)
T PRK03545 109 FAHAIFWSITASLAIRVAPAGKKAQALSLLATGTALAMVLGLPLGRVIGQYL----------GWRTTFLAIGGGALITLL 178 (390)
T ss_pred HHHHHHHHHHHHHHHHhCChhhhhhHHHHHHHHHHHHHHHHhhHHHHHHHHh----------cHHHHHHHHHHHHHHHHH
Confidence 6666677888889999999999999999999999999999999999998877 899999999888777655
Q ss_pred HHhh
Q 011783 466 MTFK 469 (477)
Q Consensus 466 ~~~~ 469 (477)
....
T Consensus 179 ~~~~ 182 (390)
T PRK03545 179 LLIK 182 (390)
T ss_pred HHHH
Confidence 5443
No 148
>PRK03893 putative sialic acid transporter; Provisional
Probab=99.43 E-value=2.6e-12 Score=126.84 Aligned_cols=131 Identities=19% Similarity=0.227 Sum_probs=104.6
Q ss_pred chHhHHHHHH-HHhcccccchhhhhhhHHHHHHHHHHHHHHhhhhhhhhhhcCCchhhHHHHHHHHHHHHHHHhh--hhH
Q 011783 59 SLFPFLYFMI-KDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLS--VNF 135 (477)
Q Consensus 59 ~~~~~~~~~~-~~~~~s~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~Grr~~~~~~~~~~~i~~~~~~~~--~~~ 135 (477)
.....+|.+. +++|.+..+ .+++.+...++..++.++.|+++||+|||+++..+.++..+..++.... .+.
T Consensus 293 ~~~~~lp~~l~~~~g~~~~~------~g~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 366 (496)
T PRK03893 293 PIQALLPTYLKTDLGYDPHT------VANVLFFSGFGAAVGCCVGGFLGDWLGTRKAYVCSLLISQLLIIPVFAIGGANV 366 (496)
T ss_pred hHHHHHHHHHHhhcCCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHhhccccHH
Confidence 3456778666 589999998 9999999999999999999999999999999988877766665544332 344
Q ss_pred HHHHHHHHHhhhcccchhhH-HHHhhhhccccchhhHHHHHHHHhHHHHHHHHhHHHHhhh
Q 011783 136 WMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQ 195 (477)
Q Consensus 136 ~~l~~~r~l~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~ 195 (477)
+.+.+..++.+.......+. .+++.|.+|+++|++++++.+....+|..+||.++|.+.+
T Consensus 367 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~lgp~l~g~l~~ 427 (496)
T PRK03893 367 WVLGLLLFFQQMLGQGISGLLPKLIGGYFDTEQRAAGLGFTYNVGALGGALAPILGALIAQ 427 (496)
T ss_pred HHHHHHHHHHHHHhcccchhhHHHHHhhCCHHHhhcccchhhhhhhHHHHHHHHHHHHHhc
Confidence 44555555554433233344 7889999999999999999999999999999999999988
No 149
>PRK10091 MFS transport protein AraJ; Provisional
Probab=99.42 E-value=1.9e-11 Score=116.27 Aligned_cols=178 Identities=10% Similarity=0.100 Sum_probs=134.9
Q ss_pred hhhHHHHHHHHHHHhhhhhhHHHHHHhhcCcccCCccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHH
Q 011783 273 WPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAG 352 (477)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 352 (477)
+.++......+.............|.+.. ++|.+..+.++..+...++..++++ ..+++.||+|||+.+..+.
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~------~~g~s~~~~g~~~s~~~~~~~~~~~-~~g~l~dr~g~r~~~~~~~ 75 (382)
T PRK10091 3 KVILSLALGTFGLGMAEFGIMGVLTELAH------DVGISIPAAGHMISYYALGVVVGAP-IIALFSSRYSLKHILLFLV 75 (382)
T ss_pred chHHHHHHHHHHHHhhHHHHHhChHHHHH------HcCCCHHHHhHHHHHHHHHHHHHHH-HHHHHHccCccHHHHHHHH
Confidence 34455555555555555555555554443 3899999999999999999999998 9999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhhhhHHHHhHHHHHHhhcCCcchhhHHhHHHHHHHHHHHHHhhhHHHH
Q 011783 353 VLTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIAMTGMSLFKAAGPAGGGA 432 (477)
Q Consensus 353 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~ 432 (477)
.+..++.+...+..+. ..+.+.-.+.+++.+...+.......+..|+++|+++++.......++..++|.+++.
T Consensus 76 ~~~~~~~~l~~~~~~~------~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~ 149 (382)
T PRK10091 76 ALCVIGNAMFTLSSSY------LMLAIGRLVSGFPHGAFFGVGAIVLSKIIKPGKVTAAVAGMVSGMTVANLLGIPLGTY 149 (382)
T ss_pred HHHHHHHHHHHHhCcH------HHHHHHHHHHHhhhHHHHHHHHHHHHHhCChHHhhHHHHHHHHHHHHHHHHhccHHHH
Confidence 8888877766554431 1233334455666666677777788899999999999999999999999999999999
Q ss_pred HHHHhhhhccccCCCCchHHHHHHHHHHHHHHHHHhhhhhhc
Q 011783 433 LFSWAQKRLDASFLPGSQMVFFVLNVVEAIGVLMTFKPFLAQ 474 (477)
Q Consensus 433 l~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 474 (477)
+.+.. +|+..|.+.+++.++..+.... ..||
T Consensus 150 l~~~~----------gwr~~f~~~~~~~~~~~~~~~~-~lp~ 180 (382)
T PRK10091 150 LSQEF----------SWRYTFLLIAVFNIAVLASIYF-WVPD 180 (382)
T ss_pred Hhhhc----------cHHHHHHHHHHHHHHHHHHHHH-hCCC
Confidence 88876 8999999988877666554433 3444
No 150
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=99.42 E-value=2e-11 Score=116.45 Aligned_cols=146 Identities=16% Similarity=0.095 Sum_probs=120.9
Q ss_pred CccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhh
Q 011783 307 GGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNL 386 (477)
Q Consensus 307 ~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 386 (477)
+++|.++.+.++..+...++..++++ +.+++.||+|||+.+..+..+..++.+......+ ...+.+..++.++
T Consensus 33 ~~~g~s~~~~g~~~~~~~~~~~~~~~-~~g~l~d~~g~r~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~l~g~ 105 (385)
T TIGR00710 33 ADLSTPASIVQMTLTLYLLGFAAGQL-LWGPLSDRYGRRPVLLLGLFIFALSSLGLALSNN------IETLLVLRFVQAF 105 (385)
T ss_pred HHhCCCHHHHHHHHHHHHHHHHHHHH-hhhhHHHhcCChHHHHHHHHHHHHHHHHHHHHcc------HHHHHHHHHHHHc
Confidence 34899999999999999999999998 8899999999999999988888777776655432 1133344455567
Q ss_pred hhHHHHhHHHHHHhhcCCcchhhHHhHHHHHHHHHHHHHhhhHHHHHHHHhhhhccccCCCCchHHHHHHHHHHHHHHHH
Q 011783 387 LSVSIITGLFILQNRAVDQDQRGAANGIAMTGMSLFKAAGPAGGGALFSWAQKRLDASFLPGSQMVFFVLNVVEAIGVLM 466 (477)
Q Consensus 387 ~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 466 (477)
+.+...+...++..|.+|+++|+++.|+.+....+|..++|.+.+.+.++. +|+..|++.+++.++..+.
T Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~~----------~~~~~~~~~~~~~~~~~~~ 175 (385)
T TIGR00710 106 GASAGSVISQALVRDIYPGEELSRIYSILMPVLALAPAVAPLLGGYILVWL----------SWHAIFAFLSLAGILLSAL 175 (385)
T ss_pred chhHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc----------CHHHHHHHHHHHHHHHHHH
Confidence 777788888999999999999999999999999999999999999998877 8999998888777776665
Q ss_pred Hhh
Q 011783 467 TFK 469 (477)
Q Consensus 467 ~~~ 469 (477)
..+
T Consensus 176 ~~~ 178 (385)
T TIGR00710 176 IFF 178 (385)
T ss_pred HHH
Confidence 543
No 151
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=99.41 E-value=2.6e-11 Score=116.35 Aligned_cols=152 Identities=16% Similarity=0.091 Sum_probs=120.9
Q ss_pred cCCccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHH
Q 011783 305 KLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTIPLLTSYPYIAMLSGFGLAFLLNCASVVK 384 (477)
Q Consensus 305 ~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 384 (477)
..+++|++..+.|+..+...++..++++ ..+++.||+|||+.+..+.++..++.....+..+. ..+.+.-++.
T Consensus 34 l~~~~~~s~~~~g~~~s~~~~~~~~~~~-~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~~~~~~------~~l~~~r~l~ 106 (412)
T TIGR02332 34 MGKDLGLSATMFGLAATLFYAAYVICGI-PSNIMLAIIGARRWIAGIMVLWGIASTATMFATGP------ESLYLLRILV 106 (412)
T ss_pred hHhhcCCCHHHHHHHHHHHHHHHHHHHh-hHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhcCH------HHHHHHHHHH
Confidence 3345899999999999999999999998 88999999999999999988888887776654331 1334444556
Q ss_pred hhhhHHHHhHHHHHHhhcCCcchhhHHhHHHHHHHHHHHHHhhhHHHHHHHHhh--hhccccCCCCchHHHHHHHHHHHH
Q 011783 385 NLLSVSIITGLFILQNRAVDQDQRGAANGIAMTGMSLFKAAGPAGGGALFSWAQ--KRLDASFLPGSQMVFFVLNVVEAI 462 (477)
Q Consensus 385 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~~--~~~~~~~~~g~~~~~~~~~~~~~~ 462 (477)
+++.+...+....++.|.+|+++|+++.|+.+....+|..+++.+++.+.+... +. .||+..|++.++..++
T Consensus 107 G~~~~~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~------~gwr~~f~~~~~~~l~ 180 (412)
T TIGR02332 107 GIAEAGFLPGILLYLTFWFPAYFRARANALFMIAMPVTMALGLILSGYILALDGLMAL------KGWQWLFLLEGFPSVI 180 (412)
T ss_pred HHHHhhHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCc------cchhHHHHHHHHHHHH
Confidence 677777888888889999999999999999999999999999999998875311 11 1899999998877766
Q ss_pred HHHHHhh
Q 011783 463 GVLMTFK 469 (477)
Q Consensus 463 ~~~~~~~ 469 (477)
..++.++
T Consensus 181 ~~~~~~~ 187 (412)
T TIGR02332 181 LGVMTWF 187 (412)
T ss_pred HHHHHhh
Confidence 5554433
No 152
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=99.41 E-value=2.3e-11 Score=116.68 Aligned_cols=176 Identities=11% Similarity=0.025 Sum_probs=130.6
Q ss_pred chhhHHHHHHHHHHHhhhhhhHHHHHHhhcCcccCCccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHhh-cchhHHHH
Q 011783 272 NWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERIL-GPIMVARI 350 (477)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~ 350 (477)
.+.++..+.......+..+....+++.|+.+. +|++..+++.+.........++.+ ++|+++||+ |||+.+..
T Consensus 8 p~~l~~l~~~~~~e~fs~Yg~~~~L~~yL~~~-----lgls~~~a~~i~~~~~~~~~l~~l-igG~LaDRilGrrr~ili 81 (493)
T PRK15462 8 PRAIYYVVALQIWEYFSFYGMRALLILYLTNQ-----LKYDDNHAYELFSAYCSLVYVTPI-LGGFLADKVLGNRMAVML 81 (493)
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-----cCCCHHHHHHHHHHHHHHHHHHHH-HHHHHHHHccCcHHHHHH
Confidence 34455556666666667777888889888754 799999999999998888888877 999999999 99999999
Q ss_pred HHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhhhhHHHHhHHHHHHhhcCCcc--hhhHHhHHHHHHHHHHHHHhhh
Q 011783 351 AGVLTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVDQD--QRGAANGIAMTGMSLFKAAGPA 428 (477)
Q Consensus 351 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~g~~~g~~~~~~~~g~~~~~~ 428 (477)
+.++..++.+.+..... ... . ......+...+.+...+...+++.|.+|++ +|.++.++.....++|+.++|.
T Consensus 82 G~il~~lg~lll~~~~~--~~~-~--~~l~l~li~iG~G~~~~~~~alv~elfp~~~~~R~sgf~i~Y~~~nlG~~iap~ 156 (493)
T PRK15462 82 GALLMAIGHVVLGASEI--HPS-F--LYLSLAIIVCGYGLFKSNVSCLLGELYEPTDPRRDGGFSLMYAAGNVGSIIAPI 156 (493)
T ss_pred HHHHHHHHHHHHHHhhc--chh-H--HHHHHHHHHHhcccccccHHHHHHHHCCCCCccccceehHHHHHHHHHHHHHHH
Confidence 99888888665543211 101 1 111111112333444566678889999875 6999999999999999999999
Q ss_pred HHHHHHHHhhhhccccCCCCchHHHHHHHHHHHHHHHHHh
Q 011783 429 GGGALFSWAQKRLDASFLPGSQMVFFVLNVVEAIGVLMTF 468 (477)
Q Consensus 429 ~~g~l~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 468 (477)
+.|++.+.. ||+..|.+.++..+++.+...
T Consensus 157 l~g~L~~~~----------Gw~~~F~iaaigm~l~li~~~ 186 (493)
T PRK15462 157 ACGYAQEEY----------SWAMGFGLAAVGMIAGLVIFL 186 (493)
T ss_pred HHHHHHhhh----------ChHHHHHHHHHHHHHHHHHHH
Confidence 999998877 899999987776666655543
No 153
>TIGR00893 2A0114 d-galactonate transporter.
Probab=99.41 E-value=3.9e-12 Score=121.70 Aligned_cols=149 Identities=13% Similarity=0.105 Sum_probs=108.9
Q ss_pred hHHHHHHHHHHHhhhchhchHhHHHHH-HHHhcccccchhhhhhhHHHHHHHHHHHHHHhhhhhhhhhhcCCch--hhHH
Q 011783 41 TELFSIWIIVLCTALPISSLFPFLYFM-IKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKP--VIIM 117 (477)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~s~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~Grr~--~~~~ 117 (477)
+.++...+..++............|.+ .+++|.+..+ .+++.+...++..++.++.|+++||+|||+ ....
T Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 288 (399)
T TIGR00893 215 RRVWGLALGQFLVNIGLGFFLTWFPTYLVQERGLSILE------AGFMASLPGIVGFIGMILGGRLSDLLLRRGKSLVFA 288 (399)
T ss_pred HHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcccHHH------hhHHHHHHHHHHHHHHHHHHHHHHHHhhcccchhHH
Confidence 445566666677777777777777755 4568888888 899999999999999999999999999996 1111
Q ss_pred ------HHHHHHHHHHHHHhhhhHHHHHHHHHHhhhcccchhhH-HHHhhhhccccchhhHHHHHHHHhHHHHHHHHhHH
Q 011783 118 ------GTASVVIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALG 190 (477)
Q Consensus 118 ------~~~~~~i~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~ 190 (477)
+.++..+........++.+..+....+.+.+.+ ..+. .+++.|.+|+++|++++++.+....+|..++|.+.
T Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~i~ 367 (399)
T TIGR00893 289 RKTAIIAGLVLSLLMFATNYVNIPYAALALVALGFFGLG-AGAIGWALISDNAPGNIAGLTGGLINSLGNLGGIVGPIVI 367 (399)
T ss_pred HHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHhchh-hhhHHHHHHHhhcChhHHHHHHHHHHHHHHHhhhhhhHHh
Confidence 111111111222223344444444445455555 5666 99999999999999999999999999999999999
Q ss_pred HHhhhc
Q 011783 191 GFLAQP 196 (477)
Q Consensus 191 ~~l~~~ 196 (477)
+.+.+.
T Consensus 368 g~l~~~ 373 (399)
T TIGR00893 368 GAIAAT 373 (399)
T ss_pred hhhccC
Confidence 999883
No 154
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=99.41 E-value=2e-12 Score=123.70 Aligned_cols=150 Identities=20% Similarity=0.192 Sum_probs=115.7
Q ss_pred HHHHHHHHHHHhhhchhchHhHHHHHH-HHhcccccchhhhhhhHHHHHHHHHHHHHHhhhhhhhhhhcCCchhhHHHHH
Q 011783 42 ELFSIWIIVLCTALPISSLFPFLYFMI-KDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTA 120 (477)
Q Consensus 42 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~s~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~Grr~~~~~~~~ 120 (477)
.+.......+............+|.+. +++|.+..+ .+.+.+...++..++.++.|+++||+|||+.+.....
T Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~------~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~ 293 (394)
T TIGR00883 220 PFLLGLGLVIATTTTFYLITTYLPTYLTQTLGLSANS------ALLVLMLSLILFFITIPLSGALSDRIGRRPVLIIFTV 293 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhH------HHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHH
Confidence 344555555555566666667777655 778888888 8999999999999999999999999999998776554
Q ss_pred HHHHHH--HHHHh--hhhHHHHHHHHHHhhhcccchhhH-HHHhhhhccccchhhHHHH-HHHHhHHHHHHHHhHHHHhh
Q 011783 121 SVVIFN--TLFGL--SVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLST-VSTAWGIGLIIGPALGGFLA 194 (477)
Q Consensus 121 ~~~i~~--~~~~~--~~~~~~l~~~r~l~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~-~~~~~~~g~~~g~~~~~~l~ 194 (477)
+..+.. +.... .++.+.++...++.|++.+...+. .+++.|.+|+++|++++++ .+....+|..++|.++|.+.
T Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~g~~~~p~~~g~l~ 373 (394)
T TIGR00883 294 LAALLAVPLLMALLDSGSFTLFFFLVLGLALIGGMYTGPMGSFLPELFPTEVRYTGASLAYNLAGAIFGGFAPYIAAALV 373 (394)
T ss_pred HHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHhhhHHHHHHHhCCccceeeEeeehhHhHHHHHhhHHHHHHHHHH
Confidence 444333 22222 246677777888889887777666 9999999999999999997 45667789999999999999
Q ss_pred hcc
Q 011783 195 QPA 197 (477)
Q Consensus 195 ~~~ 197 (477)
++.
T Consensus 374 ~~~ 376 (394)
T TIGR00883 374 AMT 376 (394)
T ss_pred HHc
Confidence 843
No 155
>TIGR00895 2A0115 benzoate transport.
Probab=99.41 E-value=3.9e-12 Score=121.87 Aligned_cols=144 Identities=19% Similarity=0.256 Sum_probs=115.3
Q ss_pred HHHHHHHHHhhhchhchHhHHHHHHHHhcccccchhhhhhhHHHHHHHHHHHHHHhhhhhhhhhhcCCchhhHHHHHHHH
Q 011783 44 FSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVV 123 (477)
Q Consensus 44 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~Grr~~~~~~~~~~~ 123 (477)
..+++..++............|.+.+++|.+..+ .+++.+...++..++.++.|+++||+|||+.+....+...
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~------~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 326 (398)
T TIGR00895 253 VLLWLLYFMLLVGVYFLTNWLPKLMVELGFSLSL------AATGGALFNFGGVIGSIIFGWLADRLGPRVTALLLLLGAV 326 (398)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHH------HHHHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHH
Confidence 3444444455555555666778888999999888 9999999999999999999999999999955544444433
Q ss_pred HHHHHHHhhhhHHHHHHHHHHhhhcccchhhH-HHHhhhhccccchhhHHHHHHHHhHHHHHHHHhHHHHh
Q 011783 124 IFNTLFGLSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFL 193 (477)
Q Consensus 124 i~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l 193 (477)
...++....++.+.+++..++.|++.+...+. .+++.|.+|+++|++++|+......+|..+||.++|++
T Consensus 327 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~~G~l 397 (398)
T TIGR00895 327 FAVLVGSTLFSPTLLLLLGAIAGFFVNGGQSGLYALMALFYPTAIRATGVGWAIGIGRLGAIIGPILAGYL 397 (398)
T ss_pred HHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHHHHHhHHhc
Confidence 33333333567777888889999998887777 99999999999999999999999999999999999876
No 156
>PRK10504 putative transporter; Provisional
Probab=99.40 E-value=2.8e-11 Score=118.61 Aligned_cols=173 Identities=19% Similarity=0.086 Sum_probs=134.7
Q ss_pred hhHHHHHHHHHHHhhhhhhHHHHHHhhcCcccCCccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHH
Q 011783 274 PLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGV 353 (477)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 353 (477)
.++......++............|.+..+ +|.++.+.+...+...++..++.+ +.+++.||+|||+.+..+..
T Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~------~g~s~~~~~~~~~~~~~~~~~~~~-~~g~l~d~~g~r~~~~~~~~ 83 (471)
T PRK10504 11 QLWIVAFGFFMQSLDTTIVNTALPSMAQS------LGESPLHMHMVIVSYVLTVAVMLP-ASGWLADRVGVRNIFFTAIV 83 (471)
T ss_pred HHHHHHHHHHHHHHhHHHHHHHHHHHHHH------hCcCHHHHHHHHHHHHHHHHHHHH-HHHHHHHHhchHHHHHHHHH
Confidence 45566666666665556666677766654 899999999999888888888887 89999999999999988877
Q ss_pred HHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhhhhHHHHhHHHHHHhhcCCcchhhHHhHHHHHHHHHHHHHhhhHHHHH
Q 011783 354 LTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIAMTGMSLFKAAGPAGGGAL 433 (477)
Q Consensus 354 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l 433 (477)
+..++.+...+..+ ...+.+...+.+++.+...+....++.+.+|+++|+++.|+.+....+|..++|.+.|.+
T Consensus 84 ~~~~~~~~~~~~~~------~~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~g~l 157 (471)
T PRK10504 84 LFTLGSLFCALSGT------LNELLLARVLQGVGGAMMVPVGRLTVMKIVPREQYMAAMTFVTLPGQVGPLLGPALGGLL 157 (471)
T ss_pred HHHHHHHHHHHhCC------HHHHHHHHHHHHhhhHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHhhhHHHHHH
Confidence 77766655443321 112334445556777778888888999999999999999999999999999999999999
Q ss_pred HHHhhhhccccCCCCchHHHHHHHHHHHHHHHHHhh
Q 011783 434 FSWAQKRLDASFLPGSQMVFFVLNVVEAIGVLMTFK 469 (477)
Q Consensus 434 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 469 (477)
.++. ||++.|.+...+..++.+....
T Consensus 158 ~~~~----------gw~~~f~~~~~~~~l~~~~~~~ 183 (471)
T PRK10504 158 VEYA----------SWHWIFLINIPVGIIGAIATLM 183 (471)
T ss_pred Hhhc----------cHHHHHHHHHHHHHHHHHHHHH
Confidence 9876 8999999887777766665544
No 157
>PRK03633 putative MFS family transporter protein; Provisional
Probab=99.40 E-value=7.9e-12 Score=118.84 Aligned_cols=135 Identities=19% Similarity=0.294 Sum_probs=109.3
Q ss_pred HhhhchhchHhHHHHHHHHhcccccchhhhhhhHHHHHHHHHHHHHHhhhhhhhhhhcCCchhhHHHHHHHHHHHHHHHh
Q 011783 52 CTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGL 131 (477)
Q Consensus 52 ~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~Grr~~~~~~~~~~~i~~~~~~~ 131 (477)
............+|.+.++.|.+.++ .|++.+...++..+++++.|++.||+|+|+++..+.....++.+...
T Consensus 211 ~~~~~~~~~~~~lp~~~~~~g~s~~~------~g~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~- 283 (381)
T PRK03633 211 ISGIVLGSLYGLMPLYLNHQGMSDAS------IGFWMALLVSAGILGQWPIGRLADRFGRLLVLRVQVFVVILGSIAML- 283 (381)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCHHH------HHHHHHHHHHHHHHHHhhhHHHHHHcCcHHHHHHHHHHHHHHHHHHh-
Confidence 33333444455678788888888888 89999999999999999999999999999999988888777665443
Q ss_pred hhhHHHHHHHHHHhhhcccchhhH-HHHhhhhccccchhhHHHHHHHHhHHHHHHHHhHHHHhhh
Q 011783 132 SVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQ 195 (477)
Q Consensus 132 ~~~~~~l~~~r~l~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~ 195 (477)
+ ........++.|++.+...|. .+.+.|..|+++++...+.+....++|..+||.++|++.+
T Consensus 284 -~-~~~~~~~~~l~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~igp~~~G~l~~ 346 (381)
T PRK03633 284 -S-QAAMAPALFILGAAGFTLYPVAMAWACEKVEHHELVAMNQALLLSYTVGSLLGPSFTAMLMQ 346 (381)
T ss_pred -h-hHHHHHHHHHHHHHHHhHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 2 233445677788876666777 8889999998888888888888999999999999999988
No 158
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=99.40 E-value=5.5e-12 Score=120.75 Aligned_cols=147 Identities=16% Similarity=0.287 Sum_probs=112.6
Q ss_pred HHHHHHHHHHHhhhchhchHhHHHHHHHHhcccccchhhhhhhHHHHHHHHHHHHHHhhhhhhhhhhcCCchhhH-HHHH
Q 011783 42 ELFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVII-MGTA 120 (477)
Q Consensus 42 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~Grr~~~~-~~~~ 120 (477)
.++...+..++............|.+.+++|.+..+ .+++.+...++..++.+..|+++||+|||+.+. .+.+
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~s~~~------~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~l 296 (402)
T TIGR00897 223 NVLLGGMVRIINTIGLFGFAVFLPMFVAELGFSTSE------WLQIWGTFFFTNIVFNVIFGIVGDKLGWMNTVRWFGGV 296 (402)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChhH------HHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHH
Confidence 344444555555555566667788888899999988 899999999999999999999999999988764 3334
Q ss_pred HHHHHHHHHHh-----hhhHHHHHHHHHHhhhcccchhhHHHHhhhhccccchhhHHHHHHHHhHHHHHHHHhHHHHhhh
Q 011783 121 SVVIFNTLFGL-----SVNFWMAVLTRFLLGSLNGLLGPIKAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQ 195 (477)
Q Consensus 121 ~~~i~~~~~~~-----~~~~~~l~~~r~l~G~~~g~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~ 195 (477)
..+++.+.... .++.+..++..++.|++.+...+....+.|..| ++|++++|+.+....+|..++|.+++.+.+
T Consensus 297 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~lg~~~gp~i~g~l~~ 375 (402)
T TIGR00897 297 GCGIFTLALYYIPQHFGHSFAVALIIAIALGIFLAGYVPLAAVFPTLAP-KHKGAAMSVLNLSAGLSAFLAPAIAVLFIG 375 (402)
T ss_pred HHHHHHHHHHHHHHccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhCc-chhHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 44443333322 235677778888889887766666566677654 689999999999999999999999999998
No 159
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=99.39 E-value=5.8e-12 Score=113.85 Aligned_cols=172 Identities=14% Similarity=0.106 Sum_probs=143.5
Q ss_pred hHHHHHHHHHHHhhhhhhHHHHHHhhcCcccCCccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHH
Q 011783 275 LMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVL 354 (477)
Q Consensus 275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 354 (477)
+....+.+..+.+.--.+....|... ++.++|..+.|.+.+...+..-++.. +.|.++||.++|..+..++++
T Consensus 31 f~~~fiGYa~fYl~RknF~~a~p~l~------e~~~lsk~~lG~i~s~f~i~YG~sKf-~~G~~sDr~npr~fm~~gLil 103 (448)
T COG2271 31 FLSIFIGYAAFYLTRKNFNLAMPALI------EDGGLSKTQLGILGSAFSITYGVSKF-VMGVLSDRSNPRYFMAFGLIL 103 (448)
T ss_pred HHHHHHHHHHHHHHHHhHhhccHHHH------HhcCCCHHHHHHHHHHHHHHHHHHHH-HhhhhcccCCCceeehHHHHH
Confidence 34445555555555555544444333 33779999999999999999999999 999999999999999999999
Q ss_pred HHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhhhhHHHHhHHHHHHhhcCCcchhhHHhHHHHHHHHHHHHHhhhHH--HH
Q 011783 355 TIPLLTSYPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIAMTGMSLFKAAGPAGG--GA 432 (477)
Q Consensus 355 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~--g~ 432 (477)
+++..+++.+... ...+.++..+.+.+.+.-.|.....+..-+|+++||+..++-|+..++|+++.|.+. +.
T Consensus 104 sai~nil~Gfs~s------~~~~~~l~~lng~fQg~Gwpp~~~~i~~Wfsr~eRG~~~siWn~shNiGGal~~~~~~la~ 177 (448)
T COG2271 104 SAIVNILFGFSPS------LFLFAVLWVLNGWFQGMGWPPCARTITHWFSRKERGTWWSIWNTSHNIGGALAPLVALLAF 177 (448)
T ss_pred HHHHHHHHhhhhH------HHHHHHHHHHHHHHhcCCCcHHHHHHHHHcCccccCceEEEehhhhhcccchHHHHHHHHH
Confidence 9999999888774 335666667778899999999999999999999999999999999999999999999 88
Q ss_pred HHHHhhhhccccCCCCchHHHHHHHHHHHHHHHHHhh
Q 011783 433 LFSWAQKRLDASFLPGSQMVFFVLNVVEAIGVLMTFK 469 (477)
Q Consensus 433 l~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 469 (477)
+.++. +|+..|++-++++++..++.++
T Consensus 178 ~~~~~----------~w~~~f~~pgiiaiival~~~~ 204 (448)
T COG2271 178 FAFHG----------GWRAAFYFPGIIAIIVALILLF 204 (448)
T ss_pred HHhcc----------chhHHHHHHHHHHHHHHHHHHH
Confidence 87776 8999999999998888777766
No 160
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=99.39 E-value=2.8e-11 Score=113.90 Aligned_cols=163 Identities=20% Similarity=0.211 Sum_probs=128.8
Q ss_pred HHHHHhhhhhhHHHHHHhhcCcccCCccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHH
Q 011783 282 YCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTIPLLTS 361 (477)
Q Consensus 282 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 361 (477)
.++............+.++. +++|.++.+.+++.+...++..++++ ..+++.||+|||+.+..+..+..++...
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~-----~~~~~s~~~~~~~~~~~~~~~~~~~~-~~g~l~dr~g~r~~l~~~~~~~~~~~~~ 78 (352)
T PF07690_consen 5 FFLSGFGFSIISPALPLYLA-----EELGLSPSQIGLLFSAFFLGSALFSP-FAGYLSDRFGRRRVLIIGLLLFALGSLL 78 (352)
T ss_dssp HHHHHHHHHHHHHHHH-HHH-----CCSTTTSHCHHHHHHHHHHHHHHHHH-HHHHHHHHS-HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHH-----HccCCCHHHHHHHHHHHHHHHHHHHH-HHHHHHHHcCCeeeEeehhhhhhhHHHH
Confidence 33334344444445552332 33899999999999999999999998 8899999999999999998888888444
Q ss_pred HHHHHHhhhhhHHHHHHHHHHHHhhhhHHHHhHHHHHHhhcCCcchhhHHhHHHHHHHHHHHHHhhhHHHHHHHHhhhhc
Q 011783 362 YPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIAMTGMSLFKAAGPAGGGALFSWAQKRL 441 (477)
Q Consensus 362 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~ 441 (477)
..+.. + .+ .+.+..++.+++.+...+....++.+.+|+++|++++++.+....+|..++|.+++.+.+..
T Consensus 79 ~~~~~---~--~~-~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~---- 148 (352)
T PF07690_consen 79 LAFAS---N--FW-LLLIARFLLGIGSGFFSPASNALIADWFPPEERGRAFGILSAGFSLGSILGPLLGGFLISYF---- 148 (352)
T ss_dssp HHHHC---C--HH-HHHHHHHHHHHHHHHHHHHHHHHHHHCCCTCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHC----
T ss_pred hhhhh---h--HH-HHhhhccccccccccccccccccccccchhhhhhhccccccchhhhhhhcccchhhhhhhcc----
Confidence 44321 1 23 45556666778888899999999999999999999999999999999999999999998776
Q ss_pred cccCCCCchHHHHHHHHHHHHHHHH
Q 011783 442 DASFLPGSQMVFFVLNVVEAIGVLM 466 (477)
Q Consensus 442 ~~~~~~g~~~~~~~~~~~~~~~~~~ 466 (477)
+|+..|++.+++.++..++
T Consensus 149 ------~~~~~~~~~~~~~~~~~il 167 (352)
T PF07690_consen 149 ------GWRWAFLISAILSLIAAIL 167 (352)
T ss_dssp ------HHCCHHHHHHHHHHHHHHH
T ss_pred ------ccccccccccchhhhhhhh
Confidence 7889999999988888775
No 161
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=99.38 E-value=4.7e-09 Score=98.67 Aligned_cols=362 Identities=14% Similarity=0.051 Sum_probs=207.2
Q ss_pred hHHHHHHHHHHHhhhchhchHhHHHHHHHHhcc-cccchhhhhhhHHHHHHHHHHHHHHhhhhhhhhhhcCCchhhHHHH
Q 011783 41 TELFSIWIIVLCTALPISSLFPFLYFMIKDFQI-AKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGT 119 (477)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-s~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~Grr~~~~~~~ 119 (477)
+....++...+++..+.-+.....|.+..+... +--. .+...-+-.+...+.++..|.+.||..|.+++..+.
T Consensus 2 ~~~~~Ly~sh~ls~w~dR~w~Fa~~L~L~~i~p~sLl~------~siygl~~~~~~~~f~~~vG~~iD~~~Rl~~~~~~l 75 (432)
T PF06963_consen 2 RALWRLYLSHFLSTWGDRMWEFAVPLFLISIFPGSLLP------VSIYGLVRSLSAILFGPWVGRWIDRSPRLKVIRTSL 75 (432)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcHH------HHHHHHHHHHHHHHhhHHHHHHHhCCcchhhHHHHH
Confidence 345678889999999999999999977777643 3332 444455555667888899999999999999988876
Q ss_pred HHHHHHHHHHHh------h--h-------hHHHHHHHHHHhhhcccchhhH--HHHhhhhc------cccchhhHHHHHH
Q 011783 120 ASVVIFNTLFGL------S--V-------NFWMAVLTRFLLGSLNGLLGPI--KAYACEIF------REEHQALGLSTVS 176 (477)
Q Consensus 120 ~~~~i~~~~~~~------~--~-------~~~~l~~~r~l~G~~~g~~~~~--~~~i~~~~------~~~~r~~~~~~~~ 176 (477)
+.--++..+.+. . + -...+++.-.+.|.-.-....+ .+.=.||. +++++.+.++...
T Consensus 76 ~~Qn~sv~~s~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~i~~Las~~~~iavERDWVvvi~~~~~~~La~~NA~mR 155 (432)
T PF06963_consen 76 VVQNLSVAASCALFLLLLSYPSSSSQSSWLFIALFALLILLGAIERLASIANTIAVERDWVVVIAGGDPGALARMNATMR 155 (432)
T ss_pred HHHHHHHHHHHHHHHHHHhCCccccccchHHHHHHHHHHHHHHHHHHHHhhhhheeccchhhhhcCCChhhHHHHHHHHH
Confidence 654433322221 1 0 1122222222222222222222 22224443 3455666666666
Q ss_pred HHhHHHHHHHHhHHHHhhhccccCCcccccccccccccchHHHHHHHHHhhcc----------ccccCCCCCCccchhhh
Q 011783 177 TAWGIGLIIGPALGGFLAQPAEKYPNLFSSESLFGKFPYFLPCLCISLFAFGE----------TLHRHNDDDDSCDVSYD 246 (477)
Q Consensus 177 ~~~~~g~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~----------~~~~~~~~~~~~~~~~~ 246 (477)
-.=-+.-+++|++.|.+... .+..... ......-..-..+| .|.-..+++++.+...+
T Consensus 156 RIDL~ckllaPl~vG~l~t~-------~s~~~~~-----~~i~~~N~~S~~vEy~~l~~VY~~~P~L~~~~~~~~~~~~~ 223 (432)
T PF06963_consen 156 RIDLFCKLLAPLFVGLLMTF-------ASPVIAA-----IFIAGWNLASVFVEYFLLARVYNSVPALAVKKRSSESESSS 223 (432)
T ss_pred HHHHHHHHHHHHHHHHHhhc-------cCHHHHH-----HHHHHHHHHHHHHHHHHHHHHHHhChHhcCCCCCccccccc
Confidence 66778899999999999872 2221111 11111111111111 11111111111000000
Q ss_pred hhh---------hhhccchhhcccCCchhhhhhcchhhHHHHHHHHHHHhhhhhhHHHHHHhhcCcccCCccccchhhhH
Q 011783 247 ALE---------SASAEVKEEEGREATPKKSLLKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVG 317 (477)
Q Consensus 247 ~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g 317 (477)
+.+ ...+...+.-.+....++..++++-+...+...++ ++...++...+..|+.. .|+++...|
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~Y~~q~vflas~alalL-Y~TVLsf~~lmt~yl~~------~G~s~~~ig 296 (432)
T PF06963_consen 224 DEESSSESSSDPSILKRLWNPLRTIIRGWRTYFRQPVFLASFALALL-YFTVLSFGGLMTAYLKS------QGYSPSVIG 296 (432)
T ss_pred cccccccccchhhHHHHHHHHHHHHhccHHHHHhCHHHHHHHHHHHH-HHHHhcCcHHHHHHHHH------CCCCHHHHH
Confidence 000 00000001112233456677777755554444444 44456777778888876 699999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHHHhhh----hhHHHHHHHHHHHHhhhhHHHHh
Q 011783 318 EVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTIPLLTSYPYIAMLSG----FGLAFLLNCASVVKNLLSVSIIT 393 (477)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~ 393 (477)
.+-....+.++.+.. +.+++.+|+|..+.-..+......++.........+. ......+.....+.-++--+.-.
T Consensus 297 i~R~~gav~Gl~gT~-~~p~l~~riGlvr~G~~~l~~q~~~L~~~v~~~~~~~~~~~~~s~~~l~~gi~~SR~GLW~fDL 375 (432)
T PF06963_consen 297 IFRGLGAVFGLLGTW-VYPWLMKRIGLVRAGLWSLWWQWVCLALCVVSFWAPGSPFSSISAYLLLGGIALSRIGLWSFDL 375 (432)
T ss_pred HHHHHHHHHHHHHHH-HHHHHHHHhcchhhHHHHHHHHHHHHHHHHHHHhcCCCCchhhHHHHHHHHHHHHHHHHHhhhH
Confidence 999999999999988 9999999999888877777655544332222111111 12222333333333344444555
Q ss_pred HHHHHHhhcCCcchhhHHhHHHHHHHHHHHHHhhh
Q 011783 394 GLFILQNRAVDQDQRGAANGIAMTGMSLFKAAGPA 428 (477)
Q Consensus 394 ~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~ 428 (477)
...-+.+|.+|+++||+..|+.+..+++...+.-.
T Consensus 376 ~~~qi~Qe~V~~~~Rg~v~gvq~sl~~lf~ll~~~ 410 (432)
T PF06963_consen 376 AVTQIMQENVPESERGAVSGVQNSLQSLFELLSFV 410 (432)
T ss_pred HHHHhhcccCCHHHhhHHHHHHHHHHHHHHHHHHH
Confidence 66678889999999999999999999887755443
No 162
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=99.38 E-value=9.6e-11 Score=114.46 Aligned_cols=154 Identities=14% Similarity=0.107 Sum_probs=109.0
Q ss_pred CccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhh
Q 011783 307 GGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNL 386 (477)
Q Consensus 307 ~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 386 (477)
+++|++..+.+...+...++..++++ +.+++.||+|+|+.+..+.++..++.+...+..+. + .+.+..++.++
T Consensus 64 ~~~gls~~~~g~~~~~~~~~~~~~~~-~~G~l~dr~G~r~~~~~~~~~~~~~~~~~~~~~s~-----~-~l~~~r~l~G~ 136 (476)
T PLN00028 64 DNLNLTKSDIGNAGIASVSGSIFSRL-AMGPVCDLYGPRYGSAFLLMLTAPAVFCMSLVSSA-----T-GFIAVRFFIGF 136 (476)
T ss_pred HHcCCCHHHHHHHHHHHHHHHHHHHH-HHHHHHHHhCChHHHHHHHHHHHHHHHHHHHhcCH-----H-HHHHHHHHHHH
Confidence 44899999999998888888888888 89999999999999988887777776655554321 1 22222233344
Q ss_pred hhHHHHhHHHHHHhhcCCcchhhHHhHHHHHHHHHHHHHhhhHHHHHHHHhhhhccccCCCCchHHHHHHHHHHHHHHHH
Q 011783 387 LSVSIITGLFILQNRAVDQDQRGAANGIAMTGMSLFKAAGPAGGGALFSWAQKRLDASFLPGSQMVFFVLNVVEAIGVLM 466 (477)
Q Consensus 387 ~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 466 (477)
+.+.. .....++.+.+|+++||+++|+.+...++|..+++.+.+.+........... ..||+..|++.+++.++..+.
T Consensus 137 ~~~~~-~~~~~~i~~~~~~~~rg~a~g~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~-~~gWr~~f~i~g~l~l~~~l~ 214 (476)
T PLN00028 137 SLATF-VSCQYWMSTMFNGKIVGTANGIAAGWGNLGGGVTQLLMPLVFPLIKDAGAPS-FTAWRIAFFVPGLLHIIMGIL 214 (476)
T ss_pred HHHhh-HHHHHHHHHhcChhheeHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcc-hhhhHHHHHHHHHHHHHHHHH
Confidence 44433 3345567899999999999999998888999988888776655432210000 017999999988887776655
Q ss_pred Hhh
Q 011783 467 TFK 469 (477)
Q Consensus 467 ~~~ 469 (477)
.++
T Consensus 215 ~~~ 217 (476)
T PLN00028 215 VLT 217 (476)
T ss_pred HHH
Confidence 444
No 163
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=99.38 E-value=5.8e-11 Score=116.32 Aligned_cols=180 Identities=10% Similarity=-0.032 Sum_probs=130.3
Q ss_pred hhhhhcch-hhHHHHHHHHHHHhhhhhhHHHHHHhhcCcccCCccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHh-hc
Q 011783 266 KKSLLKNW-PLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERI-LG 343 (477)
Q Consensus 266 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~-~~ 343 (477)
..+.+++| .++..+...++..+..+....+.+.|+.+. +|++..+.+............... +++++.|| +|
T Consensus 13 ~~~~~~~p~~~~~~~~~~~~~~~~~y~~~~~l~~yl~~~-----lg~s~~~a~~~~~~~~~~~~~~~~-~~G~LaDr~~G 86 (500)
T PRK09584 13 SLNAFKQPKAFYLIFSIELWERFGYYGLQGIMAVYLVKQ-----LGMSEADSITLFSSFSALVYGLVA-IGGWLGDKVLG 86 (500)
T ss_pred ChhhhcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----cCCCHHHHHHHHHHHHHHHHHHHH-HHHHHHHhccc
Confidence 34455666 477777777777777777778888887654 899998888777765544444444 78999999 59
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhhhhHHHHhHHHHHHhhcCCcch--hhHHhHHHHHHHHH
Q 011783 344 PIMVARIAGVLTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVDQDQ--RGAANGIAMTGMSL 421 (477)
Q Consensus 344 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~g~~~g~~~~~~~~ 421 (477)
||+.+..+..+..++...+.+... . ...+.+...+.+++.+...+...++..+.+|+++ +..+.++.+...++
T Consensus 87 ~r~~~~~g~~~~~ig~~l~~~~~~--~---~~~l~~~~~l~gig~g~~~~~~~~l~~~~f~~~~~~~~~~~~~~~~~~~i 161 (500)
T PRK09584 87 TKRVIMLGAIVLAIGYALVAWSGH--D---AGIVYMGMATIAVGNGLFKANPSSLLSTCYEKDDPRLDGAFTMYYMSINI 161 (500)
T ss_pred hHHHHHHHHHHHHHHHHHHHHhcc--c---HHHHHHHHHHHHHhhhcccCCHHHHHHHhcCCCchhhhhcchHHHHHHHH
Confidence 999999999888887666654321 1 1122223333455666667777788899887643 45678888999999
Q ss_pred HHHHhhhHHHHHHHHhhhhccccCCCCchHHHHHHHHHHHHHHHH
Q 011783 422 FKAAGPAGGGALFSWAQKRLDASFLPGSQMVFFVLNVVEAIGVLM 466 (477)
Q Consensus 422 g~~~~~~~~g~l~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 466 (477)
|.+++|.+.|++.++. ||+..|.+.++..+++.+.
T Consensus 162 G~~~gp~i~g~l~~~~----------g~~~~F~i~~i~~~i~~i~ 196 (500)
T PRK09584 162 GSFFSMLATPWLAAKY----------GWSVAFALSVVGMLITVVN 196 (500)
T ss_pred HHHHHHHHHHHHHHhh----------CHHHHHHHHHHHHHHHHHH
Confidence 9999999999999887 8999999887655555443
No 164
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=99.37 E-value=3.6e-11 Score=117.03 Aligned_cols=176 Identities=12% Similarity=0.080 Sum_probs=135.6
Q ss_pred hhhHHHHHHHHHHHhhhhhhHHHHHHhhcCcccCCccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHh-hcchhHHHHH
Q 011783 273 WPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERI-LGPIMVARIA 351 (477)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~ 351 (477)
+.++......++..+..+....+++.|+.+. .++|++..+++...+...++..++.+ ++|++.|| +|||+.+..+
T Consensus 10 ~~~~~l~~~~~~~~~~~~~~~~~L~~yl~~~---~~lg~s~~~ag~~~~~~~~~~~~~~~-~~G~laDr~~G~~~~l~~~ 85 (475)
T TIGR00924 10 KPLFTLFFVELWERFSYYGMQGILAVYLVQQ---AGLGFSQEQAFIIFGAYSALVYLLTS-VGWWFGDRVWGTKKTMVLG 85 (475)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHhC---CCCCCCHHHHHHHHHHHHHHHHHHHh-hHHHHHHhhcchHHHHHHH
Confidence 3444555556665677777788888887642 23789999999999999999999998 99999999 8999999999
Q ss_pred HHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhhhhHHHHhHHHHHHhhcCCcch---hhHHhHHHHHHHHHHHHHhhh
Q 011783 352 GVLTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVDQDQ---RGAANGIAMTGMSLFKAAGPA 428 (477)
Q Consensus 352 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~g~~~g~~~~~~~~g~~~~~~ 428 (477)
..+..++.+.+.+.... + .+.....+.+.+.+...+...++..+.+|+++ |+++.++.+...++|.++||.
T Consensus 86 ~~~~~~g~~~~~~~~~~-----~-~~~~~~~l~g~g~g~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~niG~~ig~~ 159 (475)
T TIGR00924 86 GIVLMLGHFMLAMSIYP-----D-LIFYGLGTIAVGSGLFKANPSSMVGKLYERGDMPRRDGGFTLFYMSINIGSFISPL 159 (475)
T ss_pred HHHHHHHHHHHHhcccH-----h-HHHHHHHHHHhccccccCCHHHHHHHhcCCCCcccccceehhHHHHHHHHHHHHHH
Confidence 99888887766654321 1 22223333456666677888888888888654 888999999999999999999
Q ss_pred HHHHHHHHhhhhccccCCCCchHHHHHHHHHHHHHHHHHh
Q 011783 429 GGGALFSWAQKRLDASFLPGSQMVFFVLNVVEAIGVLMTF 468 (477)
Q Consensus 429 ~~g~l~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 468 (477)
+.|.+.++. ||+..|.+.++..+++.+...
T Consensus 160 l~g~l~~~~----------g~~~~f~~~~~~~~~~~l~~~ 189 (475)
T TIGR00924 160 LAGVIAENY----------GYHVGFNLAAVGMVIGLLTFF 189 (475)
T ss_pred HHHHHHHhc----------ChHHHHHHHHHHHHHHHHHHH
Confidence 999999877 899999988876666654443
No 165
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=99.37 E-value=1.2e-11 Score=117.50 Aligned_cols=147 Identities=15% Similarity=0.127 Sum_probs=121.4
Q ss_pred HHHHHHHHHHHhhhchhchHhHHHHHHHHhcccccchhhhhhhHHHHHHHHHHHHHHhhhhhhhhhhcCCchhhHHHHHH
Q 011783 42 ELFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTAS 121 (477)
Q Consensus 42 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~Grr~~~~~~~~~ 121 (477)
.++...+..++............|.+.+|.|.+..+ .|.+.+...++..+..++.|++.||+|+|+.+..+.+.
T Consensus 206 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~g~s~~~------~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~l~~~~~~ 279 (382)
T PRK11128 206 TVWRFLLCVSLLQGSHAAYYGFSAIYWQAAGYSAST------IGYLWSLGVVAEVLIFAFSNRLFRRWSARDLLLLSAIC 279 (382)
T ss_pred hHHHHHHHHHHHHHHhHhHHHHHHHHHHHCCCCHhH------HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
Confidence 344444444444444455556667677889999888 99999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhhhHHHHHHHHHHhhhcccchhhH-HHHhhhhccccchhhHHHHHH-HHhHHHHHHHHhHHHHhhh
Q 011783 122 VVIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVS-TAWGIGLIIGPALGGFLAQ 195 (477)
Q Consensus 122 ~~i~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~-~~~~~g~~~g~~~~~~l~~ 195 (477)
.+++.++.+.+++.+.+++..++.|++.+...+. ..++.+. +++++++..+..+ ...++|..+||.++|.+.+
T Consensus 280 ~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~ig~~i~G~l~~ 354 (382)
T PRK11128 280 GVVRWGLMGSTTALPWLIVIQILHCGTFTVCHLAAMRYIAAR-PGSEVIRLQALYSALAMGGSIAIMTVLSGFLYQ 354 (382)
T ss_pred HHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-CHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9998888888999999999999999998887777 8888886 5667789999876 5667888999999999998
No 166
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=99.37 E-value=9.3e-12 Score=121.59 Aligned_cols=149 Identities=16% Similarity=0.169 Sum_probs=112.6
Q ss_pred hHHHHHHHHHHHhhhchhchHhHHHH-HHHHhcccccchhhhhhhHHHHHHHHHHHHHHhhhhhhhhhhcCCchhhHHHH
Q 011783 41 TELFSIWIIVLCTALPISSLFPFLYF-MIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGT 119 (477)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~s~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~Grr~~~~~~~ 119 (477)
+.++.+.+..++...........+|. +.+++|.+..+ .++..+...++..++.+++|+++||+|||+.+....
T Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~p~yl~~~~g~s~~~------a~~~~~~~~~~~~ig~~~~G~lsDr~g~r~~~~~~~ 331 (467)
T PRK09556 258 PVIWLLCFANIFLYIVRIGIDNWSPVYAFQELGFSKED------AINTFTLFEIGALVGSLLWGWLSDLANGRRALVACI 331 (467)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHCCCchHHHHH
Confidence 34555666666655555556677784 55679999988 899999999999999999999999999998877665
Q ss_pred HHHHHHHHH--HHhhhhHHHHHHHHHHhhhcc-cchhhHHHHhhhhccccchhhHHHHHHHHhHH-HHHHHHhHHHHhhh
Q 011783 120 ASVVIFNTL--FGLSVNFWMAVLTRFLLGSLN-GLLGPIKAYACEIFREEHQALGLSTVSTAWGI-GLIIGPALGGFLAQ 195 (477)
Q Consensus 120 ~~~~i~~~~--~~~~~~~~~l~~~r~l~G~~~-g~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~-g~~~g~~~~~~l~~ 195 (477)
.+..++... ....++.+.+.+.+++.|++. +..........|.+|+++|+++.|+.+....+ |..++|.+.|.+.+
T Consensus 332 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~p~~~~g~a~gi~~~~g~l~g~~~~~~~~G~i~~ 411 (467)
T PRK09556 332 ALALIIFTLGVYQHATSEYMYLASLFALGFLVFGPQLLIGVAAVGFVPKKAIGVANGIKGTFAYLFGDSFAKVGLGMIAD 411 (467)
T ss_pred HHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHhhHHHHHHHHHHhhcchhhHHHHHHHHHHHHHHHhHHHHhhhHHHHhc
Confidence 444433322 223456667778888888653 33333356777999999999999999988886 77999999999988
No 167
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=99.37 E-value=7.4e-11 Score=112.44 Aligned_cols=167 Identities=12% Similarity=-0.016 Sum_probs=123.9
Q ss_pred chhhHHHHHHHHHHHhhhhhhHHHHHHhhcCcccCCccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHH
Q 011783 272 NWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIA 351 (477)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 351 (477)
+|+++...+..++..+.........+.+.. +++.++.+.+++.+...+...+.++ +.|++.||+|||+++..+
T Consensus 2 ~~~f~~l~~~~~~~~~~~~~~~~~~~~~~~------~~~~s~~~~~~~~~~~~l~~~l~~~-~~G~laDr~grr~vl~~~ 74 (393)
T PRK11195 2 SKGFYAIMAAQFFSALADNALLFAAIALLK------ELHYPDWSQPLLQMFFVLAYIVLAP-FVGAFADSFPKGRVMFIA 74 (393)
T ss_pred CCcHHHHHHHHHHHHHHHHHHHHHHHHHHH------HcCCcHHHHHHHHHHHHHHHHHHHh-hhhHhhhccCCchhhHHH
Confidence 355666666666655544333333333332 2677888899999999999999988 999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhhhhHHHHhHHHHHHhhcCCcchhhHHhHHHHHHHHHHHHHhhhHHH
Q 011783 352 GVLTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIAMTGMSLFKAAGPAGGG 431 (477)
Q Consensus 352 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g 431 (477)
..+..++.+....... . ...-++.+.+.+...|...+++.|.+|+++|++++|+.+....++..+||.++|
T Consensus 75 ~~~~~~~~~~~~~~~~-----~----~~~r~l~G~~~a~~~pa~~a~i~~~~~~~~~~~a~~~~~~~~~~~~~~Gp~lgG 145 (393)
T PRK11195 75 NGIKLLGCLLMLFGIH-----P----LLAYGLVGIGAAAYSPAKYGILTELLPGEKLVKANGWMEGSTIAAILLGTVLGG 145 (393)
T ss_pred HHHHHHHHHHHHHHHH-----H----HHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8887776655444322 1 222244577888899999999999999999999999999999999999999999
Q ss_pred HHHHHhhhhccccCCCCchHHHHHHHHHHHHHHH
Q 011783 432 ALFSWAQKRLDASFLPGSQMVFFVLNVVEAIGVL 465 (477)
Q Consensus 432 ~l~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 465 (477)
.+.++. +...+.+.+.+.+++.+
T Consensus 146 ~l~~~~-----------~~~~~~i~~~~~~~~~~ 168 (393)
T PRK11195 146 ALADPH-----------AEAALAVCALIYLLAAL 168 (393)
T ss_pred HHHHHH-----------HHHHHHHHHHHHHHHHH
Confidence 999853 44555555554444433
No 168
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=99.36 E-value=3.5e-11 Score=118.51 Aligned_cols=166 Identities=16% Similarity=0.048 Sum_probs=129.1
Q ss_pred HHHHHHhhhhhhHHHHHHhhcCcccCCccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHH
Q 011783 281 VYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTIPLLT 360 (477)
Q Consensus 281 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 360 (477)
..++............|.+.. ++|.++.+.++..+...++..++.+ +.+++.||+|||+.+..+..+..++.+
T Consensus 10 ~~~~~~~~~~~~~~~~p~~~~------~~g~s~~~~~~~~~~~~~~~~~~~~-~~g~l~dr~g~r~~~~~~~~~~~~~~~ 82 (485)
T TIGR00711 10 GTFMAVLDSTIVNVAIPTIAG------DLGSSLSQVQWVITSYMLANAISIP-LTGWLAKRFGTRRLFLISTFAFTLGSL 82 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHH------hcCCChhhhhHHHHHHHHHHHHHHH-hHHHHHHHhCcHHHHHHHHHHHHHHHH
Confidence 333333333344444454443 3899999999999999999999988 899999999999999999888887777
Q ss_pred HHHHHHHhhhhhHHHHHHHHHHHHhhhhHHHHhHHHHHHhhcCCcchhhHHhHHHHHHHHHHHHHhhhHHHHHHHHhhhh
Q 011783 361 SYPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIAMTGMSLFKAAGPAGGGALFSWAQKR 440 (477)
Q Consensus 361 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~ 440 (477)
......+ ...+.+..++.+++.+...+...+++.+.+|+++|+++.++......+|..++|.++|++.++.
T Consensus 83 ~~~~~~~------~~~l~~~~~~~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~--- 153 (485)
T TIGR00711 83 LCGVAPN------LELMIIFRVIQGFGGGPLIPLSFSTLLNIYPPEKRGRAMAIWGLTVLVAPALGPTLGGWIIENY--- 153 (485)
T ss_pred HHhCcCC------HHHHHHHHHHHHhhhhhHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHhhhhhccHhHhccCc---
Confidence 6655432 2234445556677778888899999999999999999999999999999999999999998876
Q ss_pred ccccCCCCchHHHHHHHHHHHHHHHHHhh
Q 011783 441 LDASFLPGSQMVFFVLNVVEAIGVLMTFK 469 (477)
Q Consensus 441 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 469 (477)
+|++.|++.+.+.++..++..+
T Consensus 154 -------~w~~~f~~~~~~~~~~~~~~~~ 175 (485)
T TIGR00711 154 -------HWRWIFLINVPIGIIVVVVAFF 175 (485)
T ss_pred -------CceehhhhhhHHHHHHHHHHHH
Confidence 8999999887777666555443
No 169
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=99.36 E-value=9.4e-11 Score=112.62 Aligned_cols=144 Identities=11% Similarity=0.042 Sum_probs=115.6
Q ss_pred CccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhh
Q 011783 307 GGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNL 386 (477)
Q Consensus 307 ~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 386 (477)
+++|.++.+.+++.+...++..++++ +.+++.||+|||+.+..+..+..++.+...+..+ ...+....++.++
T Consensus 40 ~~~~~s~~~~g~~~~~~~~~~~~~~~-~~G~l~Dr~g~r~~~~~~~~~~~~~~~~~~~~~~------~~~l~~~~~l~G~ 112 (405)
T TIGR00891 40 GEFGLTTVDAASLISAALISRWFGAL-MFGLWGDRYGRRLPMVTSIVLFSAGTLACGFAPG------YITMFIARLVIGI 112 (405)
T ss_pred HHhCCChhhHHHHHHHHHHHHHHHHH-HHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhcc------HHHHHHHHHHHHh
Confidence 33899999999999999999999998 8999999999999999888887777666655432 1233444555667
Q ss_pred hhHHHHhHHHHHHhhcCCcchhhHHhHHHHHHHHHHHHHhhhHHHHHHHHhhhhccccCCCCchHHHHHHHHHHHHHHH
Q 011783 387 LSVSIITGLFILQNRAVDQDQRGAANGIAMTGMSLFKAAGPAGGGALFSWAQKRLDASFLPGSQMVFFVLNVVEAIGVL 465 (477)
Q Consensus 387 ~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 465 (477)
+.+...+...+++.|..|+++|+++.++.+....+|..+++.+.+.+.+..+. +|+..|.+.++..++..+
T Consensus 113 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~l~~~~~~--------~w~~~f~~~~~~~~~~~~ 183 (405)
T TIGR00891 113 GMGGEYGSSAAYVIESWPKHLRNKASGLLISGYAVGAVVAAQVYSLVVPVWGD--------GWRALFFISILPIIFALW 183 (405)
T ss_pred hhhhhhHHHHHHHHHhCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCc--------cHHHHHHHHHHHHHHHHH
Confidence 77778888889999999999999999999999999999999999998876510 388888876655555443
No 170
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=99.35 E-value=1.1e-10 Score=111.62 Aligned_cols=145 Identities=12% Similarity=0.076 Sum_probs=115.8
Q ss_pred ccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhhh
Q 011783 308 GLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNLL 387 (477)
Q Consensus 308 ~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 387 (477)
++|.+..+.+...+...++..++++ +.+++.||+|||+.+..+..+..++........+. + .+.+..++.+.+
T Consensus 32 ~~~~s~~~~~~~~~~~~~~~~~~~~-~~G~l~Dr~g~r~~l~~~~~~~~i~~~~~~~~~~~-----~-~~~~~~~l~g~~ 104 (392)
T PRK10473 32 DLNASEAQLHIAFSVYLAGMAAAML-FAGKIADRSGRKPVAIPGAALFIIASLLCSLAETS-----S-LFLAGRFLQGIG 104 (392)
T ss_pred HhCCCHHHHHHHHHHHHHHHHHHHH-hHhHHHHHhCChHHHHHHHHHHHHHHHHHHHhCcH-----H-HHHHHHHHHHhh
Confidence 3889999999999999999999888 89999999999999998888777776665543321 1 223333445566
Q ss_pred hHHHHhHHHHHHhhcCCcchhhHHhHHHHHHHHHHHHHhhhHHHHHHHHhhhhccccCCCCchHHHHHHHHHHHHHHHHH
Q 011783 388 SVSIITGLFILQNRAVDQDQRGAANGIAMTGMSLFKAAGPAGGGALFSWAQKRLDASFLPGSQMVFFVLNVVEAIGVLMT 467 (477)
Q Consensus 388 ~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 467 (477)
.+...+....++.+.+|+++|+++.++.+....++..++|.+++.+.+.. +|+..|++.+++.++..++.
T Consensus 105 ~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~i~~~~~~~i~~~l~~~~----------g~~~~~~~~~~~~~i~~~~~ 174 (392)
T PRK10473 105 AGCCYVVAFAILRDTLDDRRRAKVLSLLNGITCIIPVLAPVLGHLIMLKF----------PWQSLFYTMAAMGILVLLLS 174 (392)
T ss_pred hhHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCc----------ChHHHHHHHHHHHHHHHHHH
Confidence 66777788889999999999999999999999999999999998887765 88899988887777666654
Q ss_pred hh
Q 011783 468 FK 469 (477)
Q Consensus 468 ~~ 469 (477)
..
T Consensus 175 ~~ 176 (392)
T PRK10473 175 LF 176 (392)
T ss_pred HH
Confidence 43
No 171
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=99.35 E-value=1.1e-10 Score=114.66 Aligned_cols=168 Identities=15% Similarity=0.080 Sum_probs=126.8
Q ss_pred HHHHHHHHhhhhhhHHHHHHhhcCcccCCccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHH
Q 011783 279 IIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTIPL 358 (477)
Q Consensus 279 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 358 (477)
++..++...-........|.... ++|.+..+.++..+.+.++.....+ ..+++.||+|||+.+..+..+..++
T Consensus 12 ~~~~~~~~ld~tiv~~a~p~i~~------~l~~s~~~~~~~~~~~~l~~~~~~~-~~G~l~D~~Grk~~l~~~~~~~~~~ 84 (495)
T PRK14995 12 VLVYIPVAIDATVLHVAAPTLSM------TLGASGNELLWIIDIYSLVMAGMVL-PMGALGDRIGFKRLLMLGGTLFGLA 84 (495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH------HhCCCHhHHHHHHHHHHHHHHHHHH-HHHHHHHHhccHHHHHHHHHHHHHH
Confidence 33444433333444444554443 3888999999999999999888887 8899999999999999999988888
Q ss_pred HHHHHHHHHhhhhhHHHHHHHHHHHHhhhhHHHHhHHHHHHhhcC-CcchhhHHhHHHHHHHHHHHHHhhhHHHHHHHHh
Q 011783 359 LTSYPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAV-DQDQRGAANGIAMTGMSLFKAAGPAGGGALFSWA 437 (477)
Q Consensus 359 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~ 437 (477)
.+......+. ..+++.-.+.+++.+...+.....+.+.+ |+++|+++.|+......+|..+||.++|.+.++.
T Consensus 85 ~~~~~~a~~~------~~li~~r~l~G~g~~~~~~~~~~~l~~~~~~~~~r~~~~g~~~~~~~~g~~~gp~lgg~l~~~~ 158 (495)
T PRK14995 85 SLAAAFSPTA------SWLIATRALLAIGAAMIVPATLAGIRATFTEEKQRNMALGVWAAVGSGGAAFGPLVGGILLEHF 158 (495)
T ss_pred HHHHHHcCCH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccC
Confidence 7776655431 13333444556666777777666665554 7799999999999999999999999999999887
Q ss_pred hhhccccCCCCchHHHHHHHHHHHHHHHHHhh
Q 011783 438 QKRLDASFLPGSQMVFFVLNVVEAIGVLMTFK 469 (477)
Q Consensus 438 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 469 (477)
||++.|++...+.++..++..+
T Consensus 159 ----------gwr~~f~i~~~~~~~~~~l~~~ 180 (495)
T PRK14995 159 ----------YWGSVFLINVPIVLVVMGLTAR 180 (495)
T ss_pred ----------ChHHHHHHHHHHHHHHHHHHHH
Confidence 9999999988777776665544
No 172
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=99.34 E-value=3.3e-09 Score=97.82 Aligned_cols=343 Identities=12% Similarity=0.043 Sum_probs=207.9
Q ss_pred HHHHHH-hcccccchhhhhhhHHHHHHHHHHHHHHhhhhhhhhhhcCCchhhHHHHHHHHHHHHHHHhhhhHHHHHHHHH
Q 011783 65 YFMIKD-FQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLSVNFWMAVLTRF 143 (477)
Q Consensus 65 ~~~~~~-~~~s~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~l~~~r~ 143 (477)
|++.+. .|.+.+|- ..-+.-+..-.+....++...++|..+.|++++++.+...+...+..+.++...+-+.-+
T Consensus 28 ~yL~~~~kn~T~~qv-----~~~i~Pv~tYSyl~~l~~vflltd~l~Ykpviil~~~~~i~t~~lll~~~sv~~mq~~q~ 102 (412)
T PF01770_consen 28 PYLTGPDKNFTEEQV-----NNEIYPVWTYSYLAFLLPVFLLTDYLRYKPVIILQALSYIITWLLLLFGTSVLAMQLMQF 102 (412)
T ss_pred HHHcCCccCCCHHHH-----HHhhhhHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHCcHHHHHHHHH
Confidence 455554 78887771 234556666677888899999999999999999999999999999999999999999999
Q ss_pred HhhhcccchhhHHHHhhhhccccchhhHHHHHHHHhHHHHHHHHhHHHHhhhccc-cCCcccccccccccccchHHHHHH
Q 011783 144 LLGSLNGLLGPIKAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAE-KYPNLFSSESLFGKFPYFLPCLCI 222 (477)
Q Consensus 144 l~G~~~g~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 222 (477)
+-|++.+.-..-.+++-...|+++-.++.+...++.-+|-.++.++|-.+..... +++..... ......+.++
T Consensus 103 ~yg~~~a~evay~sYiys~v~~~~yq~vts~~raa~l~g~~~s~~lgQllvs~~~~sy~~L~~i------sl~~~~~a~~ 176 (412)
T PF01770_consen 103 FYGLATAAEVAYYSYIYSVVDKEHYQKVTSYTRAATLVGRFISSLLGQLLVSFGGVSYFQLNYI------SLASVSLALL 176 (412)
T ss_pred HHHHHHHHHHHHHHHheeecCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHH------HHHHHHHHHH
Confidence 9999988855558999888899999999999999999999999999988876211 11111110 0011223344
Q ss_pred HHHhhcccccc---CCCCCCcc---chhhhhhhhhhcc---chhhcc-----------cCCchhhhhhcchhhHHHHHHH
Q 011783 223 SLFAFGETLHR---HNDDDDSC---DVSYDALESASAE---VKEEEG-----------REATPKKSLLKNWPLMSSIIVY 282 (477)
Q Consensus 223 ~~~~l~~~~~~---~~~~~~~~---~~~~~~~~~~~~~---~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~ 282 (477)
..+++|..++. ++..+++. +...++.++..++ .++... ......++..++|.++.-.+-+
T Consensus 177 ~~~fLP~~~~S~~f~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~y~~~~ll~WSlWW 256 (412)
T PF01770_consen 177 IALFLPMPKRSLFFHRKPPAEQDANESESDKMNESPESSSSTEKSPSTESSSRKSVLRLLWKDFKSCYSNPRLLLWSLWW 256 (412)
T ss_pred HHHHcCCCCcccceeccCccccccccccccccccccccccccccCcccccchHHHHHHHHHHHHHHHhcCchHHHHHHHH
Confidence 44567754432 11111000 0000000000000 000000 0112344556778777766666
Q ss_pred HHHHhhhhhhHHHHHHhhcCcccCCccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHH--HH
Q 011783 283 CVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTIPL--LT 360 (477)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~--~~ 360 (477)
.+..+......++....-.+. ...+-+..-.|.+-+...+.+.+..+ ..+++..++++...+.++......+ ++
T Consensus 257 a~atcgy~qv~nYvQ~LW~~v---~~~~~~~vYNG~VeA~~tllgA~~al-~~g~v~~~w~~~~~l~l~~~S~l~a~~L~ 332 (412)
T PF01770_consen 257 AFATCGYYQVINYVQSLWDTV---PPSDNESVYNGAVEAASTLLGAIAAL-LAGYVKVNWDRWGELALGVFSLLQAGLLF 332 (412)
T ss_pred HHHHhHHHHHHHHHHHHHHhc---CCCCCCcccchHHHHHHHHHHHHHHH-HHhHhhcchHHHHHHHHHHHHHHHHHHHH
Confidence 665555555444444333221 11233444567787888888888877 7788866666655555444433323 33
Q ss_pred HHHHHHHhhhhhHHHHHHHHHHHHhhhhHHHHhHHHHHHhhcCCcchhhHHhHHHHHHHHHHHHHhhh
Q 011783 361 SYPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIAMTGMSLFKAAGPA 428 (477)
Q Consensus 361 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~ 428 (477)
++....+ .| ...+..++.........+....-++.....|.-|.+.|+.+++..+-+.+-..
T Consensus 333 lm~~t~~-----Iw-v~Y~~yIif~~~y~fliTiA~~qIA~~l~~e~yaLVFGiNtf~Al~LQtilT~ 394 (412)
T PF01770_consen 333 LMSFTGN-----IW-VCYAGYIIFRSLYMFLITIASFQIAKNLSEERYALVFGINTFVALVLQTILTL 394 (412)
T ss_pred HHHHhhH-----HH-HHHHHHHHHHHHHHHHHHHHHHHHHHhccccceeeeeeeHHHHHHHHHHheEE
Confidence 3333322 22 23333333333444555555666666677888999999988776655554433
No 173
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=99.34 E-value=3e-11 Score=118.80 Aligned_cols=147 Identities=16% Similarity=0.173 Sum_probs=112.1
Q ss_pred HHHHHHHHHHhhhchhchHhHHHHHHHHhcccccchhhhhhhHHHHHHHHHHHHHHhhhhhhhhhhcCCchhhHHHHHHH
Q 011783 43 LFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASV 122 (477)
Q Consensus 43 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~Grr~~~~~~~~~~ 122 (477)
++...+..+.............|.+.+++|.+..+ .++......++..++.++.|+++||+|||+.+.++.++.
T Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~------~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~ 359 (481)
T TIGR00879 286 FLGVVLQWFQQFTGINAIMYYSPTIFENAGVSTDH------AFLVSIIVGAVNFAFTFVAIFLVDRFGRRPLLLIGAAGM 359 (481)
T ss_pred HHHHHHHHHHHHhCCeehHHHHHHHHHHcCCCchH------HHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHH
Confidence 33444444444455555666778888999999877 889999999999999999999999999999999998888
Q ss_pred HHHHHHHHhh-----h------hHHHHHHHHHHhhhcccchhhH-HHHhhhhccccchhhHHHHHHHHhHHHHHHHHhHH
Q 011783 123 VIFNTLFGLS-----V------NFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALG 190 (477)
Q Consensus 123 ~i~~~~~~~~-----~------~~~~l~~~r~l~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~ 190 (477)
+++.++.++. + +...+....++.+.......+. ..++.|.+|+++|++++++.+....+|.+++|.+.
T Consensus 360 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~lg~~i~~~~~ 439 (481)
T TIGR00879 360 AICLFVLGILGASFVTGSSKSSGNVAIVFILLFIAFFAMGWGPVPWVIVSEIFPLSLRPKGISIAVAANWLANFIVGFLF 439 (481)
T ss_pred HHHHHHHHHHhhcccCCcccchhHHHHHHHHHHHHHHHccccCeehhhhhccCChHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8777766521 1 2333333333333333334455 77889999999999999999999999999999999
Q ss_pred HHhhh
Q 011783 191 GFLAQ 195 (477)
Q Consensus 191 ~~l~~ 195 (477)
+.+.+
T Consensus 440 ~~~~~ 444 (481)
T TIGR00879 440 PTMLE 444 (481)
T ss_pred HHHHH
Confidence 99887
No 174
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=99.33 E-value=1.7e-10 Score=112.21 Aligned_cols=184 Identities=18% Similarity=0.196 Sum_probs=146.1
Q ss_pred hhhhcchhhHHHHHHHHHHHhhhhhhHHHHHHhhcCcccCCccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcchh
Q 011783 267 KSLLKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIM 346 (477)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 346 (477)
...+|+|.+..+.+...+.++.......-.+.+..+ ..-|+...+++.....+..++.++ .+|.+.||++||+
T Consensus 4 ~aplr~~~Fr~lw~a~~iS~lG~~~~~va~~wlv~~------lt~S~~~valv~~a~~LP~~Llsl-~aG~laDr~drrr 76 (524)
T PF05977_consen 4 FAPLRNRNFRRLWIAQLISNLGDWMQTVALAWLVTQ------LTGSPLMVALVQAASTLPILLLSL-FAGALADRFDRRR 76 (524)
T ss_pred cccccCchHHHHHHHHHHHHHHHHHHHHHHHHHHHH------HhCCHHHHHHHHHHHHHHHHHHHH-HHHHHhhcccchH
Confidence 345789999988888888877776666666655443 456788899999999999988888 8999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhhhhHHHHhHHHHHHhhcCCcchhhHHhHHHHHHHHHHHHHh
Q 011783 347 VARIAGVLTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIAMTGMSLFKAAG 426 (477)
Q Consensus 347 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~ 426 (477)
.+...-.+..+....+........... ..+++..++.+.+.....|..++.+.+.+|+++...++++.+...++...+|
T Consensus 77 ili~~~~~~~~~~~~L~~l~~~~~~~~-~~Ll~~~fl~g~~~a~~~PA~~A~ip~lV~~~~L~~A~al~s~~~niar~iG 155 (524)
T PF05977_consen 77 ILILSQLLRALVALLLAVLAFFGLLSP-WLLLILTFLLGIGSAFFNPAWQAIIPELVPKEDLPAANALNSISFNIARIIG 155 (524)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCcCCH-HHHHHHHHHHHHHHHHHHHHHHHHHHHhccHhhHHHHHHHHHHHHHHHHhcc
Confidence 999988877766555544433322222 3455556667788889999999999999999999999999999999999999
Q ss_pred hhHHHHHHHHhhhhccccCCCCchHHHHHHHHHHHHHHHHHh
Q 011783 427 PAGGGALFSWAQKRLDASFLPGSQMVFFVLNVVEAIGVLMTF 468 (477)
Q Consensus 427 ~~~~g~l~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 468 (477)
|.++|.++... |...+|.+.++..++...+..
T Consensus 156 PalgG~Lva~~----------G~~~~f~inalsfl~~i~~l~ 187 (524)
T PF05977_consen 156 PALGGILVAFF----------GAAAAFLINALSFLISILALL 187 (524)
T ss_pred chHHHHHHHHH----------HHHHHHHHHHHHHHHHHHHHH
Confidence 99999999988 777888888777666555443
No 175
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=99.33 E-value=1.1e-10 Score=111.85 Aligned_cols=150 Identities=13% Similarity=0.114 Sum_probs=117.0
Q ss_pred CccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhh
Q 011783 307 GGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNL 386 (477)
Q Consensus 307 ~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 386 (477)
++++.+..+.+...+.+.++..++++ ..+++.||+|||+.+..+..+..++.+......+. ..+.+.-++.++
T Consensus 44 ~~~~~~~~~~~~~~s~~~~~~~~~~~-~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~a~~~------~~l~~~r~l~Gi 116 (413)
T PRK15403 44 RDFNADVSLAPASVSLYLAGGMALQW-LLGPLSDRIGRRPVLITGALIFTLACAATLFTTSM------TQFLIARFIQGT 116 (413)
T ss_pred HHhCCCHHHHHHHHHHHHHHHHHHHH-hhhHHHHHcCchHHHHHHHHHHHHHHHHHHHcCCH------HHHHHHHHHHHH
Confidence 34788999999999999999999998 89999999999999999888777776665544321 123333344445
Q ss_pred hhHHHHhHHHHHHhhcCCcchhhHHhHHHHHHHHHHHHHhhhHHHHHHHHhhhhccccCCCCchHHHHHHHHHHHHHHHH
Q 011783 387 LSVSIITGLFILQNRAVDQDQRGAANGIAMTGMSLFKAAGPAGGGALFSWAQKRLDASFLPGSQMVFFVLNVVEAIGVLM 466 (477)
Q Consensus 387 ~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 466 (477)
+.+...+....+..|.+|++++++++++.+....++..++|.+++.+.++. ||+..|++.+++.+++.+.
T Consensus 117 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lg~~l~~~~----------gw~~~f~~~~~~~~i~~~~ 186 (413)
T PRK15403 117 SICFIATVGYVTVQEAFGQTKGIKLMAIITSIVLVAPIIGPLSGAALMHFV----------HWKVLFAIIAVMGLIAFVG 186 (413)
T ss_pred HHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc----------CHHHHHHHHHHHHHHHHHH
Confidence 544445566678888999999999999999999999999999999988876 8999999988887777665
Q ss_pred Hhhhhhhc
Q 011783 467 TFKPFLAQ 474 (477)
Q Consensus 467 ~~~~~~~~ 474 (477)
..+ ..||
T Consensus 187 ~~~-~lp~ 193 (413)
T PRK15403 187 LLL-AMPE 193 (413)
T ss_pred HHH-hCCC
Confidence 433 3444
No 176
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=99.32 E-value=1.3e-10 Score=113.30 Aligned_cols=174 Identities=8% Similarity=-0.025 Sum_probs=132.8
Q ss_pred chhhHHHHHHHHHHHhhhhhhHHHHHHhhcCcccCCccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHh-hcchhHHHH
Q 011783 272 NWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERI-LGPIMVARI 350 (477)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~ 350 (477)
.+.++..+...+...+..+....+.+.|+.+. +|++..+++...........+..+ ++|+++|| +|||+++..
T Consensus 13 p~~~~~~~~~~~~er~~~y~~~~~l~~yl~~~-----lg~~~~~a~~i~~~~~~~~~~~~~-~~G~laDr~~G~r~~~~~ 86 (489)
T PRK10207 13 PRPFFMIFFVELWERFGYYGVQGILAVFFVKQ-----LGFSQEQAFITFGAFAALVYGLIS-IGGYVGDHLLGTKRTIVL 86 (489)
T ss_pred ChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----cCCCHHHHHHHHHHHHHHHHHHHh-hHHHhhhhccchHHHHHH
Confidence 34566666666666777777778888887754 888998888888877767767666 89999999 999999999
Q ss_pred HHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhhhhHHHHhHHHHHHhhcCCcc--hhhHHhHHHHHHHHHHHHHhhh
Q 011783 351 AGVLTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVDQD--QRGAANGIAMTGMSLFKAAGPA 428 (477)
Q Consensus 351 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~g~~~g~~~~~~~~g~~~~~~ 428 (477)
+.++..++.+...+..... . .+.+...+.+.+.+...|...+++.|.+|++ +|+++.++.....++|.++||.
T Consensus 87 g~~~~~~g~~~~~~~~~~~--~---ll~~~~~l~~ig~g~~~~~~~~li~~~~p~~~~~~~~~~~~~~~~~nig~~~g~~ 161 (489)
T PRK10207 87 GAIVLAIGYFMTGMSLLKP--D---LIFIALGTIAVGNGLFKANPASLLSKCYPPKDPRLDGAFTLFYMSINIGSLISLS 161 (489)
T ss_pred HHHHHHHHHHHHHHhccch--h---HHHHHHHHHHhccccccCCHHHHHHHhcCCCchhhhcchhHHHHHHHHHHHHHHH
Confidence 9999988877766543211 1 1222333445667777788889999999877 4578899999999999999999
Q ss_pred HHHHHHHHhhhhccccCCCCchHHHHHHHHHHHHHHHH
Q 011783 429 GGGALFSWAQKRLDASFLPGSQMVFFVLNVVEAIGVLM 466 (477)
Q Consensus 429 ~~g~l~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 466 (477)
++|++.++. ||++.|++.++..+++.+.
T Consensus 162 l~g~l~~~~----------gw~~~F~i~~i~~~~~~~~ 189 (489)
T PRK10207 162 LAPVIADKF----------GYSVTYNLCGAGLIIALLV 189 (489)
T ss_pred HHHHHHHhh----------ChHHHHHHHHHHHHHHHHH
Confidence 999999887 8999998876544444433
No 177
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=99.32 E-value=1.3e-10 Score=109.18 Aligned_cols=148 Identities=12% Similarity=0.061 Sum_probs=108.2
Q ss_pred ccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhhh
Q 011783 308 GLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNLL 387 (477)
Q Consensus 308 ~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 387 (477)
++|.|..+.|++.+...++..++++ ..|++.||+|||+.+.........+.... .... .+..+.+.-++.+++
T Consensus 20 ~~~~s~~~~g~~~s~~~~g~~i~~~-~~G~l~Dr~grr~~~~~~~~~~~~~~~~~-~~~~-----~~~~l~~~R~l~G~g 92 (368)
T TIGR00903 20 DIDVSKEELGLLAITYPAAFLALTI-PSGLLLDRAFKRWFLFGSLATFAAAAGRL-LDPF-----NYEWLLACQLLAALG 92 (368)
T ss_pred HhCcCHHHHHHHHHHHHHHHHHHHH-HHHHHHHHccchHHHHHHHHHHHHHHHHH-HHhc-----cHHHHHHHHHHHHhH
Confidence 3899999999999999999999998 78999999998887655444333322211 1101 122334444444555
Q ss_pred hHHHHhHHHHHHhhcCCcchhhHHhHHHHHHHHHHHHHhhhHHHHHHHHhhhhccccCCCCchHHHHHHHHHHHHHHHHH
Q 011783 388 SVSIITGLFILQNRAVDQDQRGAANGIAMTGMSLFKAAGPAGGGALFSWAQKRLDASFLPGSQMVFFVLNVVEAIGVLMT 467 (477)
Q Consensus 388 ~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 467 (477)
.+. .+.......|.+|+++|++++++.+....+|..+++.+.+.+.+.. ||+..|++.+++.++..++.
T Consensus 93 ~~~-~~~~~~~~~~~~~~~~r~~a~~~~~~~~~lG~~l~~~~~~~l~~~~----------gWr~~f~~~~~l~~~~~~~~ 161 (368)
T TIGR00903 93 QPF-LLNAFAPAASQIREERRDLVISLLSFAMYLGIIFALAAGLKIYTAG----------GLQLLIIPIAAVAAAGIILV 161 (368)
T ss_pred hHH-HHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc----------chHHHHHHHHHHHHHHHHHH
Confidence 554 3444555688899999999999999999999999999999998766 99999999888877766655
Q ss_pred hhhhhhc
Q 011783 468 FKPFLAQ 474 (477)
Q Consensus 468 ~~~~~~~ 474 (477)
++ ..||
T Consensus 162 ~~-~lp~ 167 (368)
T TIGR00903 162 LA-ALPA 167 (368)
T ss_pred HH-HcCC
Confidence 44 4554
No 178
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=99.32 E-value=2.2e-10 Score=110.08 Aligned_cols=146 Identities=12% Similarity=0.041 Sum_probs=115.4
Q ss_pred CccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhh
Q 011783 307 GGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNL 386 (477)
Q Consensus 307 ~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 386 (477)
+++|.++.+.+...+...++..++++ +.+.+.||+|||+.+..+.....++........+. ..+....++.+.
T Consensus 41 ~~~~~s~~~~~~~~~~~~~~~~~~~~-~~G~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~------~~l~~~~~l~G~ 113 (406)
T PRK15402 41 EDFNAGAEWVPTSMTAYLAGGMFLQW-LLGPLSDRIGRRPVMLAGVAFFILTCLAILLAQSI------EQFTLLRFLQGI 113 (406)
T ss_pred HHhCCCHHHHHHHHHHHHHHHHHHHH-HHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHccH------HHHHHHHHHHHh
Confidence 44899999999999999999999988 88999999999999998887777776665443321 123333444455
Q ss_pred hhHHHHhHHHHHHhhcCCcchhhHHhHHHHHHHHHHHHHhhhHHHHHHHHhhhhccccCCCCchHHHHHHHHHHHHHHHH
Q 011783 387 LSVSIITGLFILQNRAVDQDQRGAANGIAMTGMSLFKAAGPAGGGALFSWAQKRLDASFLPGSQMVFFVLNVVEAIGVLM 466 (477)
Q Consensus 387 ~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 466 (477)
..+...+.......|.+|+++|+++.++......++..++|.+.+.+.++. +|+..|++.+++.+++.+.
T Consensus 114 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~----------~w~~~~~~~~~~~~~~~~~ 183 (406)
T PRK15402 114 GLCFIGAVGYAAIQESFEEADAIKITALMANVALLAPLLGPLVGAALIHVL----------PWRGMFVLFAALAALSFFG 183 (406)
T ss_pred HhhhHHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc----------CccHHHHHHHHHHHHHHHH
Confidence 555666777888889999999999999998888899999999999988876 8999999888887776665
Q ss_pred Hhh
Q 011783 467 TFK 469 (477)
Q Consensus 467 ~~~ 469 (477)
...
T Consensus 184 ~~~ 186 (406)
T PRK15402 184 LWR 186 (406)
T ss_pred HHH
Confidence 443
No 179
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=99.32 E-value=1.2e-10 Score=110.64 Aligned_cols=143 Identities=15% Similarity=0.155 Sum_probs=119.0
Q ss_pred cccchhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhhhh
Q 011783 309 LNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNLLS 388 (477)
Q Consensus 309 ~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 388 (477)
+|.++.+.+...+...++..++++ ..+++.||+|||+.+..+..+..++........+. ..+....++.+++.
T Consensus 21 ~~~s~~~~~~~~~~~~~~~~~~~~-~~g~l~d~~g~~~~~~~~~~~~~i~~~~~~~~~~~------~~~~~~~~l~g~~~ 93 (377)
T PRK11102 21 FGVSAGSVQMTLSAYILGFAIGQL-FYGPMADSFGRKPVILGGTLVFALAAVACALAQTI------DQLIYMRFLHGLAA 93 (377)
T ss_pred hCCCHHHHHHHHHHHHHHHHHHHH-hhchHHhhcCChHHHHHHHHHHHHHHHHHHHHccH------HHHHHHHHHHHHHH
Confidence 799999999999999999999988 88999999999999999988888887776554321 12334445556777
Q ss_pred HHHHhHHHHHHhhcCCcchhhHHhHHHHHHHHHHHHHhhhHHHHHHHHhhhhccccCCCCchHHHHHHHHHHHHHHHHHh
Q 011783 389 VSIITGLFILQNRAVDQDQRGAANGIAMTGMSLFKAAGPAGGGALFSWAQKRLDASFLPGSQMVFFVLNVVEAIGVLMTF 468 (477)
Q Consensus 389 ~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 468 (477)
+...+...++..+.+|+++|+++.++.+....+|..++|.+.+.+.+.. +|+..|++.+++.++..++..
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~----------~~~~~~~~~~~~~~~~~~~~~ 163 (377)
T PRK11102 94 AAASVVINALMRDMFPKEEFSRMMSFVTLVMTIAPLLAPIIGGWLLVWF----------SWHAIFWVLALAAILAAALVF 163 (377)
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc----------ChHHHHHHHHHHHHHHHHHHH
Confidence 7777888889999999999999999999999999999999999998877 898999888877777655544
No 180
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=99.31 E-value=9.1e-11 Score=110.51 Aligned_cols=151 Identities=12% Similarity=0.053 Sum_probs=114.8
Q ss_pred HHHHHHHHHHhhhchhchHhHHHHHHHHhcccccchhhhhhhHHHHHHHHHHHHHHhhhhhhhhhhc-CCchhhHHHHHH
Q 011783 43 LFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRY-GRKPVIIMGTAS 121 (477)
Q Consensus 43 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~-Grr~~~~~~~~~ 121 (477)
++.+.+..++...........+|.+.++.|.+..+ .+.+.+...++..+++++.|++.||+ +||+.+.++.++
T Consensus 199 ~~~~~~~~~~~~~~~~~~~~~lp~~~~~~g~~~~~------~g~~~~~~~~~~i~~~~~~g~l~dr~~~~~~~~~~~~~~ 272 (355)
T TIGR00896 199 AWQVTVFFGLQSGLYYSLIGWLPAILISHGASAAT------AGSLLALMQLAQAASALLIPALARRVKDQRGIVAVLAVL 272 (355)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHH------HHHHHHHHHHHHHHHHHhHHHHHhhhccchHHHHHHHHH
Confidence 33333333444444455566788788888998888 99999999999999999999999999 567777788888
Q ss_pred HHHHHHHHHhhhhHHHHHHHHHHhhhcccchhhH-HHHhhhhcc-ccchhhHHHHHHHHhHHHHHHHHhHHHHhhhcccc
Q 011783 122 VVIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFR-EEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEK 199 (477)
Q Consensus 122 ~~i~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~-~~~i~~~~~-~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~ 199 (477)
.+++.+...+.++..... .-++.|++.|...|. .+.+.+..+ +++++...++.+....+|..++|.+.|.+.++..+
T Consensus 273 ~~~~~~~~~~~~~~~~~~-~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~gp~~~G~l~~~~g~ 351 (355)
T TIGR00896 273 QLVGLCGLLFAPMHGLWA-WALVLGLGQGGAFPLALTLIGLRSRQAAQAAALSAMAQSIGYLLAALGPLFVGVLHDISGN 351 (355)
T ss_pred HHHHHHHHHHhhhhHHHH-HHHHHHHhhhhHhHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 888777776665433322 446789998888776 676665554 56778999998888899999999999999986544
Q ss_pred C
Q 011783 200 Y 200 (477)
Q Consensus 200 ~ 200 (477)
|
T Consensus 352 ~ 352 (355)
T TIGR00896 352 W 352 (355)
T ss_pred c
Confidence 4
No 181
>PRK09952 shikimate transporter; Provisional
Probab=99.31 E-value=4e-11 Score=115.98 Aligned_cols=142 Identities=18% Similarity=0.220 Sum_probs=101.7
Q ss_pred HHHHhhhchhchHhHHHH-HHHHhcccccchhhhhhhHHHHHHHHHHHHHHhhhhhhhhhhcCCchhhHHHHHHHHHHHH
Q 011783 49 IVLCTALPISSLFPFLYF-MIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNT 127 (477)
Q Consensus 49 ~~~~~~~~~~~~~~~~~~-~~~~~~~s~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~Grr~~~~~~~~~~~i~~~ 127 (477)
..+...+.........|. +.+++|.+... ...+.....+...++.++.|+++||+|||+++..+.++..++.+
T Consensus 258 ~~~~~~~~~~~~~~~~~~y~~~~~g~s~~~------~~~~~~~~g~~~~i~~~~~g~l~Dr~grr~~~~~~~~~~~~~~~ 331 (438)
T PRK09952 258 LRLCELLTMYIVTAFALNYSTQNLGLPREL------FLNIGLLVGGLSCLTIPCFAWLADRFGRRRVYITGALIGTLSAF 331 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHH
Confidence 334444444445556664 45678887765 55556666677788899999999999999999888776655544
Q ss_pred HHHh---h-hhHHHHHHHHHHhhhcccchhhH-HHHhhhhccccchhhHHHHHH-HHhHHHHHHHHhHHHHhhhc
Q 011783 128 LFGL---S-VNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVS-TAWGIGLIIGPALGGFLAQP 196 (477)
Q Consensus 128 ~~~~---~-~~~~~l~~~r~l~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~-~~~~~g~~~g~~~~~~l~~~ 196 (477)
.... . ++.+.+++..++.|++.+...+. .++++|.+|.+.|+.+.++.+ .+..+|..++|.+.+++.+.
T Consensus 332 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~e~~p~~~r~tg~g~~~~~~~~lgg~~~p~i~g~l~~~ 406 (438)
T PRK09952 332 PFFMALEAQSIFWIVFFSIMLANIAHDMVVCVQQPMFTEMFGASYRYSGAGVGYQVASVVGGGFTPFIAAALVTY 406 (438)
T ss_pred HHHHHHHcCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCcchhHHHHhHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 3322 1 23444455566777877776666 899999999999999988854 44558999999999999873
No 182
>PRK11043 putative transporter; Provisional
Probab=99.31 E-value=3.1e-10 Score=108.86 Aligned_cols=165 Identities=18% Similarity=0.059 Sum_probs=121.8
Q ss_pred HHhhhhhhHHHHHHhhcCcccCCccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHH
Q 011783 285 FSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTIPLLTSYPY 364 (477)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 364 (477)
..........+.|.+.. ..+++|.++.+.++..+...++..++++ +.+++.||+|||+.+..+..+..++.+...+
T Consensus 15 ~~~~~~~~~~~~p~~~~---i~~~~~~s~~~~g~~~s~~~~~~~~~~~-~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~ 90 (401)
T PRK11043 15 SMLGFLATDMYLPAFKA---IQADLQTSASAVSASLSLFLAGFALGQL-LWGPLSDRYGRKPVLLAGLSLFALGSLGMLW 90 (401)
T ss_pred HHHHHHHHHHHHhhHHH---HHHHHCCCHHHHHHHHHHHHHHHHHHHH-hhhhHHhhcCCcHHHHHHHHHHHHHHHHHHH
Confidence 33333444444554311 2234899999999999999999999998 8999999999999999888777776665554
Q ss_pred HHHhhhhhHHHHHHHHHHHHhhhhHHHHhHHHHHHhhcCCcchhhHHhHHHHHHHHHHHHHhhhHHHHHHHHhhhhcccc
Q 011783 365 IAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIAMTGMSLFKAAGPAGGGALFSWAQKRLDAS 444 (477)
Q Consensus 365 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~ 444 (477)
..+ ...+.+..++.+++.+...+....+..+.+|++++++..+..+....++..++|.+.+.+.+..
T Consensus 91 ~~~------~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~------- 157 (401)
T PRK11043 91 VES------AAQLLVLRFVQAVGVCSAAVIWQALVIDRYPAQKANRVFATIMPLVALSPALAPLLGAWLLNHF------- 157 (401)
T ss_pred hcC------HHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-------
Confidence 332 1122233344445555556666778889999999999999999889999999999999998877
Q ss_pred CCCCchHHHHHHHHHHHHHHHHHhh
Q 011783 445 FLPGSQMVFFVLNVVEAIGVLMTFK 469 (477)
Q Consensus 445 ~~~g~~~~~~~~~~~~~~~~~~~~~ 469 (477)
||+..|++.+++.++..++...
T Consensus 158 ---g~~~~~~~~~~~~~~~~~~~~~ 179 (401)
T PRK11043 158 ---GWQAIFATLFAITLLLILPTLR 179 (401)
T ss_pred ---ChHHHHHHHHHHHHHHHHHHHH
Confidence 8999998888777776655443
No 183
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=99.30 E-value=1.2e-10 Score=112.98 Aligned_cols=147 Identities=10% Similarity=0.047 Sum_probs=111.3
Q ss_pred cccchhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhhhh
Q 011783 309 LNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNLLS 388 (477)
Q Consensus 309 ~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 388 (477)
.|.++.+.++..+...++..++.+ ..+++.||+|||+.+..+.++..++.+.......... ....+.+..++.+++.
T Consensus 56 ~g~s~~~~g~~~~~~~~~~~~~~~-~~G~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~l~~~~~l~g~~~ 132 (438)
T TIGR00712 56 QGFSKGELGFALSAISIAYGFSKF-IMGSVSDRSNPRVFLPAGLILSAAVMLLMGFVPWATS--SIAIMFVLLFLNGWFQ 132 (438)
T ss_pred cCCCHhHhHHHHHHHHHHHHHhhh-ccchhhhccCCceehHHHHHHHHHHHHHHhccccccc--hHHHHHHHHHHHHHHh
Confidence 589999999999999999999988 8999999999999988888777777665544321111 1112223333445555
Q ss_pred HHHHhHHHHHHhhcCCcchhhHHhHHHHHHHHHHHHHhhhHHHHHHHH-hhhhccccCCCCchHHHHHHHHHHHHHHHHH
Q 011783 389 VSIITGLFILQNRAVDQDQRGAANGIAMTGMSLFKAAGPAGGGALFSW-AQKRLDASFLPGSQMVFFVLNVVEAIGVLMT 467 (477)
Q Consensus 389 ~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~-~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 467 (477)
+...+.....+.+.+|+++|++++|+.+....+|+.++|.+.+...+. . +|+..|++.+++.++..+..
T Consensus 133 g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~g~~~~~~l~~~~~~~~~----------~w~~~f~~~~~~~~i~~~~~ 202 (438)
T TIGR00712 133 GMGWPPCGRTMVHWWSQSERGTIVSIWNCAHNIGGGIPPLLVLLGMAWFN----------DWHAALYFPAICAIIVALFA 202 (438)
T ss_pred hcchHHHHHHHHHhcCcccchhHHHHHHHHHHhHhHHHHHHHHHHHHHhh----------hhHHHHHHHHHHHHHHHHHH
Confidence 666677777888999999999999999999999999999888766543 3 78999999888777755444
Q ss_pred h
Q 011783 468 F 468 (477)
Q Consensus 468 ~ 468 (477)
.
T Consensus 203 ~ 203 (438)
T TIGR00712 203 F 203 (438)
T ss_pred H
Confidence 3
No 184
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=99.30 E-value=3.9e-10 Score=106.76 Aligned_cols=175 Identities=13% Similarity=0.030 Sum_probs=121.3
Q ss_pred hHHHHHHHHHHHhhhhhhHHHHHHhhcCcccCCccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHH
Q 011783 275 LMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVL 354 (477)
Q Consensus 275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 354 (477)
++...+.+++.......+..+.|.++. +++|+|+.+.+++.+...++..++++ ..+++.||+|||+.+..+.++
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~s~~~~~~~~~~~~~~~~~~~~-~~g~l~dr~g~r~~~~~~~~~ 76 (366)
T TIGR00886 3 LFFSWFGFFLSFSVWFAFSPLAVQMIK-----DDLGLSTAQLGNLVAVPVLAGAVLRI-ILGFLVDKFGPRYTTTLSLLL 76 (366)
T ss_pred hHHHHHHHHHHHHHHHHhHHhhhHHHH-----HHhCCCHHHhhHhhHHHHHHHHHHHH-HHHHHHHHhCchHHHHHHHHH
Confidence 444555555555555566666664343 33899999999999999999999998 899999999999999999988
Q ss_pred HHHHHHHHHHHH-HhhhhhHHHHHHHHHHHHhhhhHHHHhHHHHHHhhcCCcchhhHHhHHHHHHHHHHHHHhhhHHHHH
Q 011783 355 TIPLLTSYPYIA-MLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIAMTGMSLFKAAGPAGGGAL 433 (477)
Q Consensus 355 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l 433 (477)
..++.+...+.. +. + .+.+..++.+++.. ..+....++.+.+|+++|+++.++.....++|..+++.+.+.+
T Consensus 77 ~~i~~~~~~~~~~~~-----~-~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l 149 (366)
T TIGR00886 77 LAIPCLWAGLAVQSY-----S-VLLLLRLFIGIAGG-SFASCMPWISFFFPKKIQGTALGLAAGWGNMGGGVAQFVMPPI 149 (366)
T ss_pred HHHHHHHHHHHhhhH-----H-HHHHHHHHHHHhch-hhHhHHHHHHHhcCHhhhhHHHHHHHHHhHHHHHHHHHHHHHH
Confidence 888877766654 21 1 22223333344433 3455677889999999999999999988899999998888887
Q ss_pred HHHhhhhccccCCCCchHHH-HHHHHHHHH
Q 011783 434 FSWAQKRLDASFLPGSQMVF-FVLNVVEAI 462 (477)
Q Consensus 434 ~~~~~~~~~~~~~~g~~~~~-~~~~~~~~~ 462 (477)
..............+|++.| +..+++..+
T Consensus 150 ~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~ 179 (366)
T TIGR00886 150 IGSLIFGAGLPAHLAWGWAFVIVPAGILLL 179 (366)
T ss_pred HHHHHhcccccccccccchhHHHHHHHHHH
Confidence 76532221100011677887 433444333
No 185
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=99.30 E-value=6.2e-10 Score=106.45 Aligned_cols=185 Identities=8% Similarity=-0.077 Sum_probs=132.0
Q ss_pred hHHHHHHHHHHHhhhhhhHHHHHHhhcCcccCCccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHH
Q 011783 275 LMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVL 354 (477)
Q Consensus 275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 354 (477)
+......++.+.+.........|.+. +++|.+..+.|++.+...++..++++ ..+++.||+|+|+.+..+..+
T Consensus 5 ~~~~~~~f~~~G~~~~~~~~l~~~~~------~~~~~s~~~~g~l~s~~~~g~~i~~~-~~g~l~~r~G~r~~~~~g~~l 77 (410)
T TIGR00885 5 FALITSLFALWGFANDITNPMVPQFQ------QAFTLTAFQAALVQSAFYGGYFIMAI-PAAIFMKKLSYKAGILLGLFL 77 (410)
T ss_pred HHHHHHHHHHHHHHHHhHHHHHHHHH------HHhCCCHHHHHHHHHHHHHHHHHHHH-HHHHHHHHhCchHHHHHHHHH
Confidence 34444555555544444445555443 33899999999999999999999999 889999999999999999999
Q ss_pred HHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhhhhHHHHhHHHHHHhhcCCcchhhHHhHHHHHHHHHHHHHhhhHHHHHH
Q 011783 355 TIPLLTSYPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIAMTGMSLFKAAGPAGGGALF 434 (477)
Q Consensus 355 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~ 434 (477)
..++.+.+......+ .+..+....++.+.+.+...+....+..+..|++++++..++.+....+|..++|.+.+.+.
T Consensus 78 ~~~g~~l~~~~~~~~---~~~~~l~~~~l~G~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~~g~~i~~~l~ 154 (410)
T TIGR00885 78 YALGAFLFWPAAEIM---NYTLFLVGLFILTAGLGFLETAANPYILVMGPESTATRRLNLAQSFNPFGSIIGMVVAQQLI 154 (410)
T ss_pred HHHHHHHHHHHHhhc---cHHHHHHHHHHHHhhHHHHHhhhhHHHHHHCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 888876654433211 12234444555667777888888888888899999999999999999999999999999886
Q ss_pred HHhhhhcc----------------ccCCCCchHHHHHHHHHHHHHHHHHhh
Q 011783 435 SWAQKRLD----------------ASFLPGSQMVFFVLNVVEAIGVLMTFK 469 (477)
Q Consensus 435 ~~~~~~~~----------------~~~~~g~~~~~~~~~~~~~~~~~~~~~ 469 (477)
........ .....+|+.+|.+.+++.++..++..+
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~fl~~a~~~~~~~~~~~~ 205 (410)
T TIGR00885 155 LSNLPHQSQDVLDKLSPEELSAIKHSDLASVQTPYMIIGAVVLAVALLIML 205 (410)
T ss_pred hcCCccchhhhhhhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 43210000 000016889998888877766555433
No 186
>PRK12307 putative sialic acid transporter; Provisional
Probab=99.29 E-value=2.8e-10 Score=110.09 Aligned_cols=136 Identities=9% Similarity=-0.051 Sum_probs=112.9
Q ss_pred CccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhh
Q 011783 307 GGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNL 386 (477)
Q Consensus 307 ~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 386 (477)
+++|.++.+.++..+...++..++++ +.+++.||+|||+.+..+..+..++.+...+..+ ...+.+.-++.++
T Consensus 46 ~~~~~s~~~~~~~~~~~~~~~~l~~~-~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~------~~~l~~~r~l~G~ 118 (426)
T PRK12307 46 ADLGLTDMEGAFLATAAFIGRPFGGA-LFGLLADKFGRKPLMMWSIVAYSVGTGLSGLASG------VIMLTLSRFIVGM 118 (426)
T ss_pred HHhCCCHHHHHHHHHHHHHHHHHHHH-HHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHhH------HHHHHHHHHHHHH
Confidence 44899999999999999999999998 8999999999999999999988888776666543 2234444455667
Q ss_pred hhHHHHhHHHHHHhhcCCcchhhHHhHHHHHHHHHHHHHhhhHHHHHHHHhhhhccccCCCCchHHHHHHHHH
Q 011783 387 LSVSIITGLFILQNRAVDQDQRGAANGIAMTGMSLFKAAGPAGGGALFSWAQKRLDASFLPGSQMVFFVLNVV 459 (477)
Q Consensus 387 ~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~g~~~~~~~~~~~ 459 (477)
+.+...+....++.|..|+++|+++.++......+|..+++.+.+.+.+.. +|+..|++....
T Consensus 119 g~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg~~~~~~l~~~l~~~~----------~w~~~f~i~~~~ 181 (426)
T PRK12307 119 GMAGEYACASTYAVESWPKHLKSKASAFLVSGFGIGNIIAAYFMPSFAEAY----------GWRAAFFVGLLP 181 (426)
T ss_pred HHhhHHHHHHHHHHHhCCHhHhhHhhhHHHHHHhHHHHHHHHHHHHHcccC----------CHHHHHHHHHHH
Confidence 777788888899999999999999999999999999999999888887765 899998875443
No 187
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=99.29 E-value=4e-11 Score=116.65 Aligned_cols=157 Identities=14% Similarity=0.100 Sum_probs=104.1
Q ss_pred hHHHHHHHHHHHhhhchhchHhHHHHHHH-HhcccccchhhhhhhHHHHHHHHHHHHHHhhhhhhhhhhc--CCchhh-H
Q 011783 41 TELFSIWIIVLCTALPISSLFPFLYFMIK-DFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRY--GRKPVI-I 116 (477)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~s~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~--Grr~~~-~ 116 (477)
+.++...+..++...........+|.+.+ +.|.+..+ .++..+.+.++..++.++.|+++||+ |||+.. .
T Consensus 253 ~~~~~~~l~~~~~~~~~~~~~~~~P~~l~~~~g~s~~~------~~~~~~~~~~~~~~g~~~~G~l~dr~~~~r~~~~~~ 326 (452)
T PRK11273 253 KLLWYIAIANVFVYLLRYGILDWSPTYLKEVKHFALDK------SSWAYFLYEYAGIPGTLLCGWMSDKVFRGNRGATGV 326 (452)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHccCCcchHHH
Confidence 33445555555555555566677886555 47888888 89999999999999999999999999 555432 2
Q ss_pred HHHHHHHHHHHHHHh--hhhHHHHHHHHHHhhhcccchhhH-HHHhhhhccccchhhHHHHHHHHhHHHHH-HHHhHHHH
Q 011783 117 MGTASVVIFNTLFGL--SVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLI-IGPALGGF 192 (477)
Q Consensus 117 ~~~~~~~i~~~~~~~--~~~~~~l~~~r~l~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~-~g~~~~~~ 192 (477)
....+..++.+.... .++.+...+..++.|.+....... ..+..|.+|+++|+++.|+.+....+|.. ++|.+.|.
T Consensus 327 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~g~~v~g~ 406 (452)
T PRK11273 327 FFMTLVTIATIVYWLNPAGNPTVDMACMIVIGFLIYGPVMLIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIVGY 406 (452)
T ss_pred HHHHHHHHHHHHHHHhcccChHHHHHHHHHHHHHHHhHHHHHHHHHHHHcChhhhhhHHHHHHHHHHHHHHHhhhhhHHH
Confidence 222333333332222 234444445555555542222222 45678999999999999999988888765 58999999
Q ss_pred hhhccccCCccccccccc
Q 011783 193 LAQPAEKYPNLFSSESLF 210 (477)
Q Consensus 193 l~~~~~~~~~~~~~~~~~ 210 (477)
+.+ .++|+..|
T Consensus 407 l~~-------~~g~~~~f 417 (452)
T PRK11273 407 TVD-------FFGWDGGF 417 (452)
T ss_pred HHH-------HhcchHHH
Confidence 998 45555555
No 188
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=99.28 E-value=4e-10 Score=107.77 Aligned_cols=144 Identities=19% Similarity=0.086 Sum_probs=112.6
Q ss_pred CccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhh
Q 011783 307 GGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNL 386 (477)
Q Consensus 307 ~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 386 (477)
+++|.++.+.+...+...++..++++ ..+++.||+|||+.+..+..+..++.+......+ ...+.+..++.++
T Consensus 36 ~~~~~s~~~~~~~~~~~~~~~~~~~~-~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~------~~~l~~~~~~~g~ 108 (394)
T PRK11652 36 RDLNVREGAVQAVMAAYLLTYGLSQL-FYGPLSDRVGRRPVILVGMSIFILGTLVALFAHS------LTVLIAASAIQGL 108 (394)
T ss_pred HHhCCCHHHHHHHHHHHHHHHHHHHH-hhhhHHHhcCChHHHHHHHHHHHHHHHHHHHHcc------HHHHHHHHHHHHh
Confidence 33899999999999999999999998 8999999999999999888877777665544322 1123333444455
Q ss_pred hhHHHHhHHHHHHhhcCCcchhhHHhHHHHHHHHHHHHHhhhHHHHHHHHhhhhccccCCCCchHHHHHHHHHHHHHHHH
Q 011783 387 LSVSIITGLFILQNRAVDQDQRGAANGIAMTGMSLFKAAGPAGGGALFSWAQKRLDASFLPGSQMVFFVLNVVEAIGVLM 466 (477)
Q Consensus 387 ~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 466 (477)
+.+...+....+..+.+++++++++.+..+....++..++|.+.+.+.+.. ||+..|.+.+++.++..+.
T Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~----------g~~~~f~~~~~~~~~~~~~ 178 (394)
T PRK11652 109 GTGVGGVMARTLPRDLYEGTQLRHANSLLNMGILVSPLLAPLIGGLLTTLF----------GWRACYLFLLLLGAGVTFS 178 (394)
T ss_pred hhhHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc----------ChHHHHHHHHHHHHHHHHH
Confidence 555556666777888889899999999999999999999999999988766 8999998887766655444
Q ss_pred H
Q 011783 467 T 467 (477)
Q Consensus 467 ~ 467 (477)
.
T Consensus 179 ~ 179 (394)
T PRK11652 179 M 179 (394)
T ss_pred H
Confidence 3
No 189
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=99.27 E-value=5.2e-11 Score=113.21 Aligned_cols=148 Identities=15% Similarity=0.145 Sum_probs=105.2
Q ss_pred HHHHHHHHHHHhhhchhchHhHHHHH-HHHhcccccchhhhhhhHHHHHHHHHHHHHHhhhhhhhhhhcCC-chhhH-HH
Q 011783 42 ELFSIWIIVLCTALPISSLFPFLYFM-IKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGR-KPVII-MG 118 (477)
Q Consensus 42 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~s~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~Gr-r~~~~-~~ 118 (477)
.++.+.+..++............|.+ .+++|.+..+ .+++.+.+.++..++.++.|++.||..+ |+... ..
T Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~------~~~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~ 290 (379)
T TIGR00881 217 VLWYISLGYVFVYVVRTGILDWSPLYLTQEKGFSKEK------ASWAFTLYELGGLVGTLLAGWLSDKLFNGRRGPLAVF 290 (379)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHH------HHHHHHHHHHHcchhHHHHHHHHHHHcCCcchHHHHH
Confidence 34445555555555555566666754 5668999888 9999999999999999999999998643 33222 22
Q ss_pred HHH-HHHHHHHHHh--hhhHHHHHHHHHHhhhcccchhhH-HHHhhhhccccchhhHHHHHHHHhHHHHHHHHhHHHHhh
Q 011783 119 TAS-VVIFNTLFGL--SVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLA 194 (477)
Q Consensus 119 ~~~-~~i~~~~~~~--~~~~~~l~~~r~l~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~ 194 (477)
... ..++...... ..+....++..++.|+......+. ..++.|.+|+++|+++.++.+....+|..++|.+.|.+.
T Consensus 291 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~ 370 (379)
T TIGR00881 291 FMALIIVSLLVYWLNPAANPLMDLICLFALGFLVYGPQMLIGVIASELAPKKAAGTAAGFVGFFAYLGGILAGLPLGYLA 370 (379)
T ss_pred HHHHHHHHHHHHhcCcchhHHHHHHHHHHHHHHHhhhhHHHHHHHHHhcCcchhHHHHHHHHHhhhhhhhhhhhhHHHHH
Confidence 211 1222222222 335556666677777754444444 778899999999999999999999999999999999999
Q ss_pred h
Q 011783 195 Q 195 (477)
Q Consensus 195 ~ 195 (477)
+
T Consensus 371 ~ 371 (379)
T TIGR00881 371 D 371 (379)
T ss_pred H
Confidence 8
No 190
>KOG0637 consensus Sucrose transporter and related proteins [Carbohydrate transport and metabolism]
Probab=99.26 E-value=2.1e-10 Score=104.64 Aligned_cols=147 Identities=22% Similarity=0.342 Sum_probs=111.3
Q ss_pred hHHHHHHHHHHHhhhchhchHhHHHHHHHHhcccccchhhhhhhHHHHHHHHHHHHHHhhhhhhhhhh----cCCchhhH
Q 011783 41 TELFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADR----YGRKPVII 116 (477)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~Dr----~Grr~~~~ 116 (477)
+.++.+....+...++...-..+++++.+++|++... .+.+--+..+...+.||+.|..+|| |||||.++
T Consensus 32 ~~li~v~~ia~Gvqf~wA~elsy~tPyl~~lGvphk~------~S~iw~~gPi~G~~vQP~vG~~SDrc~sr~GRRRPfI 105 (498)
T KOG0637|consen 32 RKLISVASIAAGVQFGWALELSYLTPYLQSLGVPHKW------SSIIWLCGPLSGLLVQPLVGSASDRCTSRYGRRRPFI 105 (498)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccccHHHHHcCCCccc------ccccccccccccceecccccccccccccccccccchH
Confidence 5555556556666666666677788999999999988 8888888888889999999999994 89887765
Q ss_pred H-HHHHHHHHHHHHHhhhhHHHH------------HHHHHHhhh-----cc-cchhhHHHHhhhhccccchhh-HHHHHH
Q 011783 117 M-GTASVVIFNTLFGLSVNFWMA------------VLTRFLLGS-----LN-GLLGPIKAYACEIFREEHQAL-GLSTVS 176 (477)
Q Consensus 117 ~-~~~~~~i~~~~~~~~~~~~~l------------~~~r~l~G~-----~~-g~~~~~~~~i~~~~~~~~r~~-~~~~~~ 176 (477)
. +.+...++.++..++.++..+ .+.-++.|+ .. -...|+.+++.|...++++.+ +++.+.
T Consensus 106 ~~~s~~i~~~l~Lig~aaDig~~lgd~~~~~~~~rai~~~~lg~~LLD~A~n~~qgp~ra~L~Dl~~~d~~~~~Ans~f~ 185 (498)
T KOG0637|consen 106 LAGSLLIAVSLFLIGYAADIGLLLGDNERKPVKPRAIVLFILGFWLLDVANNTLQGPCRALLADLARGDAKKTRANSVFS 185 (498)
T ss_pred HHhhHHHHHHHhhhhhHhhhhHHhcCCcccccchHHHHHHHHHhHHHHhhhhhhhhhHHHHHHHhccChhhhhccchhHH
Confidence 5 456667777777777654332 222333343 33 346677999999998777777 999999
Q ss_pred HHhHHHHHHHHhHHHHh
Q 011783 177 TAWGIGLIIGPALGGFL 193 (477)
Q Consensus 177 ~~~~~g~~~g~~~~~~l 193 (477)
...++|..+|..++++.
T Consensus 186 ~f~avGnvLGY~~g~y~ 202 (498)
T KOG0637|consen 186 FFMAVGNVLGYALGSYL 202 (498)
T ss_pred HHHHhcceeeeeccccc
Confidence 99999999999998743
No 191
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=99.26 E-value=1.9e-10 Score=110.70 Aligned_cols=156 Identities=13% Similarity=0.194 Sum_probs=128.1
Q ss_pred hHHHHHHHHHHHhhhchhchHhHHH-HHHHHhcccccchhhhhhhHHHHHHHHHHHHHHhhhhhhhhhhcCCc--hhhHH
Q 011783 41 TELFSIWIIVLCTALPISSLFPFLY-FMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRK--PVIIM 117 (477)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~s~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~Grr--~~~~~ 117 (477)
+.+....++.++..-+.+.+..... +..+++|.+..+ ...+.-+..+...+|++++|++.||+|.| +++..
T Consensus 281 ~~~~~fLia~~l~~dg~~ti~~~~~i~a~~~lg~s~~~------l~~~~l~~~i~a~~Ga~~~g~l~~r~g~k~~~~l~~ 354 (477)
T PF11700_consen 281 RQLFLFLIAYFLYSDGVNTIISFAGIYATEVLGMSTTQ------LIVFGLVVQIVAIIGALLFGWLQDRFGPKTKRTLLI 354 (477)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHH
Confidence 4455555555554444444444444 555689999999 88888889999999999999999999999 89888
Q ss_pred HHHHHHHHHHHHHh--------hhhHHHHHHHHHHhhhcccchhhH-HHHhhhhccccchhhHHHHHHHHhHHHHHHHHh
Q 011783 118 GTASVVIFNTLFGL--------SVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPA 188 (477)
Q Consensus 118 ~~~~~~i~~~~~~~--------~~~~~~l~~~r~l~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~ 188 (477)
++.++.+..+...+ .++-+.+.+.-++.|++.|...+. .++.+|+.|+++.+..+|++....-....+||+
T Consensus 355 ~l~~~~~i~~~g~~G~~~~~~g~~~~~~f~~~a~~~G~~~G~~qs~sRs~~~~LiP~g~e~efFgly~i~gk~ss~lGPl 434 (477)
T PF11700_consen 355 SLILWIIIPLYGLFGFWPSFFGLKSPWEFWVLAVLIGLFMGGIQSASRSLFSRLIPPGREAEFFGLYAITGKASSWLGPL 434 (477)
T ss_pred HHHHHHHHHHHHHHHhhhcccCcccHHHHHHHHHHHHHHhhhHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHH
Confidence 88888666555554 567888999999999999998888 999999999999999999999999999999999
Q ss_pred HHHHhhhccccCCc
Q 011783 189 LGGFLAQPAEKYPN 202 (477)
Q Consensus 189 ~~~~l~~~~~~~~~ 202 (477)
+-+.+.+...+-|+
T Consensus 435 l~g~i~~~tg~~r~ 448 (477)
T PF11700_consen 435 LFGLITDATGSQRY 448 (477)
T ss_pred HHHHHHHHhCCchh
Confidence 99999996554444
No 192
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=99.25 E-value=1.6e-09 Score=102.93 Aligned_cols=189 Identities=11% Similarity=-0.002 Sum_probs=122.8
Q ss_pred hhhHHHHHHHHHHHhhhhhhHHHHHHhhcCcccCCccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHH
Q 011783 273 WPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAG 352 (477)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 352 (477)
|+++...+...+.+.....+....+.... .++|+|..+.+++.++..+...+.++ ..+++.||+|.|+....+.
T Consensus 34 r~l~~s~~~f~~~F~~w~~~~~l~~~~~~-----~~~~ls~~q~g~l~ai~~l~~al~ri-p~G~l~Dr~G~R~v~~~~~ 107 (462)
T PRK15034 34 RNLWISVSCLLLAFCVWMLFSAVTVNLNK-----IGFNFTTDQLFLLTALPSVSGALLRV-PYSFMVPIFGGRRWTVFST 107 (462)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhh-----hhcCCCHHHHHHHHHHHHHHHHHHHH-HHHHHHHHhCChHHHHHHH
Confidence 45555555555544444444443332222 24899999999999999999999988 6699999999999999998
Q ss_pred HHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhhhhHHHHhHHHHHHhhcCCcchhhHHhHHHHHHHHHHHHHhhhHHHH
Q 011783 353 VLTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIAMTGMSLFKAAGPAGGGA 432 (477)
Q Consensus 353 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~ 432 (477)
++..+..+...+....... ....+++..++.+++ +..++.....+++.+|+++||++.|+....+++|..+++.+.+.
T Consensus 108 ll~~i~~~~~~~a~~~~~~-s~~~lli~r~l~Gig-g~~f~~~~~~vs~wfp~~~rG~A~Gi~~g~G~~G~~l~~~l~p~ 185 (462)
T PRK15034 108 AILIIPCVWLGIAVQNPNT-PFGIFIVIALLCGFA-GANFASSMGNISFFFPKAKQGSALGINGGLGNLGVSVMQLVAPL 185 (462)
T ss_pred HHHHHHHHHHHHHHcccCC-CHHHHHHHHHHHHHH-HHhHHHHHHHHHHHCCHhHhHHHHHHHHHHHhhHHHHHHHHHHH
Confidence 8887777766654211111 122333334444454 55778888889999999999999999977777777776666655
Q ss_pred HH-----HHhhhhccccC---CCCchHHHHHHHHHHHHHHHHHhh
Q 011783 433 LF-----SWAQKRLDASF---LPGSQMVFFVLNVVEAIGVLMTFK 469 (477)
Q Consensus 433 l~-----~~~~~~~~~~~---~~g~~~~~~~~~~~~~~~~~~~~~ 469 (477)
+. +..+....... ..+++.+.++...+.++..++.++
T Consensus 186 ~i~~~l~~~~G~~~~~~~~g~~~~~~~~~~~~~~~~iv~~i~~~~ 230 (462)
T PRK15034 186 VIFVPVFAFLGVNGVPQADGSVMSLANAAWIWVPLLAIATIAAWS 230 (462)
T ss_pred HHHHHHHHHhccccccccccchHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44 22211100000 014666777777766666655554
No 193
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=99.24 E-value=9.8e-11 Score=112.02 Aligned_cols=120 Identities=16% Similarity=0.091 Sum_probs=102.7
Q ss_pred hHHHHHHHHHHHHHHhhhhhhhhhhcCCchhhHHHHHHHHHHHHHHHhhhhHHHHHHHHHHhhhcccchhhH-HHHhhhh
Q 011783 84 AGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEI 162 (477)
Q Consensus 84 ~g~~~s~~~~~~~~~~~~~G~l~Dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~-~~~i~~~ 162 (477)
.|.+.++..+...++.+..|++.||+|||+.+.++.++.++...+...++|.+.+++.+++.|++....... ..+..+.
T Consensus 256 ~g~~~~~~~i~~~~~~~~~g~l~~r~g~~~~l~~~~~l~~l~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~ 335 (396)
T TIGR00882 256 FGYVTTMGELLNALIMFCAPLIINRIGAKNALLIAGTIMSVRIIGSSFATTALEVVILKMLHAFEVPFLLVGCFKYITSQ 335 (396)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 788899999999999999999999999999999999999988888788889999999999999886665544 6677888
Q ss_pred ccccchhhHHHH-HHHHhHHHHHHHHhHHHHhhhccccCCccccccccc
Q 011783 163 FREEHQALGLST-VSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSESLF 210 (477)
Q Consensus 163 ~~~~~r~~~~~~-~~~~~~~g~~~g~~~~~~l~~~~~~~~~~~~~~~~~ 210 (477)
.+++.++...+. .+....+|..++|.++|++.+ .++++..|
T Consensus 336 ~~~~~~at~~~~~~~~~~~lg~~~~~~l~G~l~~-------~~G~~~~f 377 (396)
T TIGR00882 336 FDVRLSATIYLIGFQFAKQLAMIFLSTLAGNMYD-------SIGFQGAY 377 (396)
T ss_pred CCcceEEEeehHHHHHHHHHHHHHHHHhHHHHHH-------hcccHHHH
Confidence 888888877766 678899999999999999998 45665555
No 194
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=99.22 E-value=2e-10 Score=92.23 Aligned_cols=131 Identities=17% Similarity=0.204 Sum_probs=101.5
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhhhhHHHHhHHHHHHhh
Q 011783 322 ITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNR 401 (477)
Q Consensus 322 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 401 (477)
...++..++++ ..+++.||++||+.+..+.....++........+ .........+.++..+...+....+..|
T Consensus 6 ~~~~~~~~~~~-~~g~~~d~~g~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 78 (141)
T TIGR00880 6 GYALGQLIYSP-LSGLLTDRFGRKPVLLVGLFIFVLSTAMFALSSN------ITVLIIARFLQGFGAAFALVAGAALIAD 78 (141)
T ss_pred eehhHHHHHHh-hHHHHHhhcchhHHHHHHHHHHHHHHHHHHHhcc------HHHHHHHHHHHHHHHHHHHHhHHHHHHH
Confidence 34566677777 8899999999999998888777777665544322 1123334445566667778888889999
Q ss_pred cCCcchhhHHhHHHHHHHHHHHHHhhhHHHHHHHHhhhhccccCCCCchHHHHHHHHHHHHHHHHHhh
Q 011783 402 AVDQDQRGAANGIAMTGMSLFKAAGPAGGGALFSWAQKRLDASFLPGSQMVFFVLNVVEAIGVLMTFK 469 (477)
Q Consensus 402 ~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 469 (477)
..|+++|+++.++.+....+|..++|.+.+.+.+.. +|+..+.+.+.+.+++.+...+
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~ 136 (141)
T TIGR00880 79 IYPPEERGVALGLMSAGIALGPLLGPPLGGVLAQFL----------GWRAPFLFLAILALAAFILLAF 136 (141)
T ss_pred HCChhhhhHHHHHHHHhHHHHHHHhHHhHHHHhccc----------chHHHHHHHHHHHHHHHHHHhh
Confidence 999999999999999999999999999999998766 7888888888777777666554
No 195
>PRK15075 citrate-proton symporter; Provisional
Probab=99.22 E-value=2.2e-10 Score=110.92 Aligned_cols=140 Identities=18% Similarity=0.162 Sum_probs=101.1
Q ss_pred HHhhhchhchHhHHHHHHHH-hcccccchhhhhhhHHHHHHHHHHHHHHhhhhhhhhhhcCCchhhHHHHHHHHHHHH-H
Q 011783 51 LCTALPISSLFPFLYFMIKD-FQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNT-L 128 (477)
Q Consensus 51 ~~~~~~~~~~~~~~~~~~~~-~~~s~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~Grr~~~~~~~~~~~i~~~-~ 128 (477)
+........+....|.+.++ +|.+..+ .++....+.++..++.+++|+++||+|||+++..+..+..+... .
T Consensus 248 ~~~~~~~~~~~~~~p~~l~~~~g~~~~~------~~~~~~~~~~~~~~~~~~~g~l~Dr~g~r~~~~~~~~~~~~~~~~~ 321 (434)
T PRK15075 248 AMTTVSFYLITVYTPTFGKTVLHLSAAD------SLLVTLCVGVSNFIWLPIGGALSDRIGRRPVLIAFTVLAILTAYPA 321 (434)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHH
Confidence 33444455566677866554 8999888 88888899999999999999999999999998876554433221 1
Q ss_pred HH---hhhhHHHHHHHHHHhhhcccchhhH-HHHhhhhccccchhhHHHHHHH-HhHHHHHHHHhHHHHhhhc
Q 011783 129 FG---LSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVST-AWGIGLIIGPALGGFLAQP 196 (477)
Q Consensus 129 ~~---~~~~~~~l~~~r~l~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~-~~~~g~~~g~~~~~~l~~~ 196 (477)
.. ..+++..+....++.|++.+...+. ..++.|.+|+++|+.++++... +..++..++|.+.+++.+.
T Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~e~~p~~~rg~~~g~~~~~~~~~~g~~~p~~~g~i~~~ 394 (434)
T PRK15075 322 LSWLVAAPSFARMLAVELWLSFLYGSYNGAMVVALTEVMPAEVRTAGFSLAYSLATAIFGGFTPAISTWLIHV 394 (434)
T ss_pred HHHHHcCCchHHHHHHHHHHHHHHHHHHhhHHHHHHHHCCCCccchheeHHHHHHHHHHhhhHHHHHHHHHHh
Confidence 11 1234444445555666666666665 7889999999999999998544 4445577899999999884
No 196
>PRK11010 ampG muropeptide transporter; Validated
Probab=99.22 E-value=2.4e-09 Score=104.94 Aligned_cols=134 Identities=12% Similarity=0.199 Sum_probs=102.8
Q ss_pred HHHHHHHhcccccchhhhhhhHHHHH-HHHHHHHHHhhhhhhhhhhcCCchhhHHHHHHHHHHHHHH---Hhh-hhHHHH
Q 011783 64 LYFMIKDFQIAKREEDIGSYAGYVGS-SFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLF---GLS-VNFWMA 138 (477)
Q Consensus 64 ~~~~~~~~~~s~~~~~~~~~~g~~~s-~~~~~~~~~~~~~G~l~Dr~Grr~~~~~~~~~~~i~~~~~---~~~-~~~~~l 138 (477)
.|.+.+++|.+.++ .+++.. ...++..++.++.|+++||+|||+.+.++.++.++..+.. +.. ++.+.+
T Consensus 246 ~~~l~~~~G~s~~~------~g~~~~~~g~i~~iiG~ll~G~L~dr~g~~~~l~i~~~l~~l~~l~~~~l~~~~~~~~~l 319 (491)
T PRK11010 246 TTFLIRGVGFDAGE------VGLVNKTLGLLATIVGALYGGILMQRLSLFRALMIFGILQGVSNAGYWLLSITDKNLYSM 319 (491)
T ss_pred HHHHHHhcCCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhccccHHHH
Confidence 34556779999999 999874 6668999999999999999999998777666555544322 232 355555
Q ss_pred HHHHHHhhhcccchhhH-HHHhhhhccccchhhHHHHHHHHhHHHHHHHHhHHHHhhhccccCCccccccccc
Q 011783 139 VLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSESLF 210 (477)
Q Consensus 139 ~~~r~l~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~~~~~~~~ 210 (477)
.+.-+++.+..|...+. .++..+..+++.+++.+++.+...++|..+++.+.|.+.+ .+||+..|
T Consensus 320 ~~~~~l~~~~~g~~~~~~~a~~~~l~~~~~~~t~~gl~~s~~~lg~~~~~~~~G~l~~-------~~G~~~~f 385 (491)
T PRK11010 320 GAAVFFENLCGGMGTAAFVALLMTLCNKSFSATQFALLSALSAVGRVYVGPVAGWFVE-------AHGWPTFY 385 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHH-------HhChHHHH
Confidence 55666666666655555 8888999999999999999999999999999999999998 44565555
No 197
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=99.20 E-value=4.3e-09 Score=98.40 Aligned_cols=146 Identities=12% Similarity=0.027 Sum_probs=117.3
Q ss_pred ccccchhh-hHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhh
Q 011783 308 GLNYSTQM-VGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNL 386 (477)
Q Consensus 308 ~~g~~~~~-~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 386 (477)
++|++..+ .|.+......+..+..+ .++++.||+|.|+.+..+.+...+..++.++... ...+.+.=++.|+
T Consensus 55 elglT~~qv~G~I~s~F~ysYal~qI-p~GlLaDrlG~K~vL~l~~l~Wsl~t~L~~fa~S------l~~L~i~R~llGv 127 (511)
T TIGR00806 55 VLNFTEETVTNEIIPVLPYSHLAVLV-PVFLLTDYLRYKPVLVLQALSFVCVWLLLLLGTS------VWHMQLMEVFYSV 127 (511)
T ss_pred HcCCCHHHhcchHHHHHHHHHHHHHH-HHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHH------HHHHHHHHHHHHH
Confidence 48999999 99999999999999998 9999999999999999999998888888777543 2245555566678
Q ss_pred hhHHHHhHHHHHHhhcCCcchhhHHhHHHHHHHHHHHHHhhhHHHHHHHHhhhhccccCCCCchHHHHHHHHHHHHHHHH
Q 011783 387 LSVSIITGLFILQNRAVDQDQRGAANGIAMTGMSLFKAAGPAGGGALFSWAQKRLDASFLPGSQMVFFVLNVVEAIGVLM 466 (477)
Q Consensus 387 ~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 466 (477)
+.+... ....++.+.+|+++|+++.|+.+....+|.++++.+++.+ ...+ . ..|....++......++.++
T Consensus 128 aEA~~~-A~~syI~~WfP~kER~ratsi~~sg~~vG~~Ia~~L~qll-~s~g-W------r~y~~Ln~Isl~s~~~a~~~ 198 (511)
T TIGR00806 128 TMAARI-AYSSYIFSLVPPSRYQRAAAYSRAAVLLGVFLSSVLGQLL-VTLG-W------ISYSTLNIISLVFMTFSVFL 198 (511)
T ss_pred HHHHHH-HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhcC-c------hhHHHHHHHHHHHHHHHHHH
Confidence 888888 8899999999999999999999999999999999999994 3331 1 13444555555555556555
Q ss_pred Hhh
Q 011783 467 TFK 469 (477)
Q Consensus 467 ~~~ 469 (477)
.++
T Consensus 199 a~~ 201 (511)
T TIGR00806 199 ALF 201 (511)
T ss_pred HHh
Confidence 555
No 198
>TIGR00769 AAA ADP/ATP carrier protein family. These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.
Probab=99.20 E-value=2.8e-07 Score=87.89 Aligned_cols=369 Identities=10% Similarity=0.083 Sum_probs=195.7
Q ss_pred hhHHHHHHHHHHHhhhchhchHhHHHHHHHHhccc-----ccchhhhhhhHHHHHHHHHHHHHH-hhhhhhhhhhcCCch
Q 011783 40 ITELFSIWIIVLCTALPISSLFPFLYFMIKDFQIA-----KREEDIGSYAGYVGSSFMFGRALT-SVFWGLVADRYGRKP 113 (477)
Q Consensus 40 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s-----~~~~~~~~~~g~~~s~~~~~~~~~-~~~~G~l~Dr~Grr~ 113 (477)
++.+....+..|+..+.++.. -++.+.+..+ .+. +.++-+...+..++. .++.+++++|++|++
T Consensus 6 ~~k~~~~~l~fF~il~~Y~iL----R~lKD~lvv~~~~~gae~------i~fLk~~~~lp~~~~~~~ly~~l~~~~~~~~ 75 (472)
T TIGR00769 6 LKKFLPLFLMFFCILFNYTIL----RDTKDTLVVTAKGSGAEI------IPFLKTWVVVPMAVIFMLIYTKLSNILSKEA 75 (472)
T ss_pred HHHHHHHHHHHHHHHHHHHHH----HhhhhheeecccCCchhh------HHHHHHHHHHHHHHHHHHHHHHHHhcCCHHH
Confidence 355555666666655555444 4455566553 344 888888888877777 899999999999999
Q ss_pred hhHHHHHHHHHHHHHHHhh----h---------------------------hHHHHHHHHHHhhhcccchhh-H-HHHhh
Q 011783 114 VIIMGTASVVIFNTLFGLS----V---------------------------NFWMAVLTRFLLGSLNGLLGP-I-KAYAC 160 (477)
Q Consensus 114 ~~~~~~~~~~i~~~~~~~~----~---------------------------~~~~l~~~r~l~G~~~g~~~~-~-~~~i~ 160 (477)
++-+....+....+++++. + +.|...+......+-+..... . ..+..
T Consensus 76 lf~~~~~~F~~~f~lF~~vl~p~~~~~~p~~~~~~~~~~~~~~~~~~i~~~~~W~~~~FYv~~elw~~~vvS~lFW~fan 155 (472)
T TIGR00769 76 LFYTVISPFLGFFALFAFVIYPLSDLLHPTALADKLLSLLPPGFMGFIAILRIWSFALFYVMAELWGSVVLSLLFWGFAN 155 (472)
T ss_pred hHHHHHHHHHHHHHHHHHHHhcchhhcCCcHHHHHHHhhcchhhHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9988887777777666654 1 123333444445554444333 5 88999
Q ss_pred hhccccchhhHHHHHHHHhHHHHHHHHhHHHHhhhccccCCccc-cc----ccccccccchHHHHHHHHHhhccccccCC
Q 011783 161 EIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLF-SS----ESLFGKFPYFLPCLCISLFAFGETLHRHN 235 (477)
Q Consensus 161 ~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~~-~~----~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 235 (477)
|.++.+|-.|.+++++.+.++|.++++.+..++.+....+.... .| +..+........+.+.+...+ +... .
T Consensus 156 di~t~~qakRfy~l~~~ganlg~i~sg~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~~~~~~~~~~~~l-~~~~--~ 232 (472)
T TIGR00769 156 QITTIDEAKRFYALFGLGANVALIFSGRTIKYFSKLRASLGPGVDGWHVSLKNLMVIVICSGLAIILLYWWV-NRNV--L 232 (472)
T ss_pred hcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccChHHHHHHHHHHHHHHHHHHHHHHHHHH-Hhcc--c
Confidence 99999999999999999999999999999888874211111011 11 011100000001111111111 1111 1
Q ss_pred CCCCccchhhhhhhhhhccchhhcccCCchhhhhhcchhhHHHHHHHHHHHhhhhhhHHHHHHhhcCcccCCccccchhh
Q 011783 236 DDDDSCDVSYDALESASAEVKEEEGREATPKKSLLKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQM 315 (477)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 315 (477)
.+++..+ ++ ..++.++.+.+..++.+.++|+|.++...+...++...........-...... + -++.+
T Consensus 233 ~~~~~~~---~~---~~~~k~k~k~~~~es~k~i~~S~yL~~ia~~vi~y~~~~nlve~~~k~~v~~~-----~-p~~~~ 300 (472)
T TIGR00769 233 TDPRSYN---PA---LKEKKVKPKMSTMESLKFLVSSPYILDLALLVIAYGISINLVEVTWKSKLKAQ-----Y-PSPNE 300 (472)
T ss_pred CCccccc---hh---hccccCCCCCCHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----C-CCHHH
Confidence 1100000 00 00011111223345677889999888877766666544333332222222211 1 12222
Q ss_pred ----hHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHH---HHHHHHHHHHhhhh-------hH-HHHHHHH
Q 011783 316 ----VGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTIP---LLTSYPYIAMLSGF-------GL-AFLLNCA 380 (477)
Q Consensus 316 ----~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~-------~~-~~~~~~~ 380 (477)
.|.+....++..++.++ +.+++.+|+|-+......-++..+ +++.+......... .. .....+.
T Consensus 301 ~~~f~g~~~~~~gi~tl~~~l-~~~~l~~~~Gw~~~a~i~Pii~lit~~~Ff~~~~f~~~~~~~~~~l~~~pl~l~v~~g 379 (472)
T TIGR00769 301 YSAFMGDFSTWTGVVSVTMML-LSGNVIRKYGWLTAALITPLVMLLTGVAFFSLIFFGGPAAPLVAKLGMTPLLLAVYVG 379 (472)
T ss_pred HHHHHHHHHHHHHHHHHHHHH-HHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHhcccchhhhhhhccChHHHHHHHH
Confidence 34455555666666777 558999999877666555444443 22222111110000 00 1111111
Q ss_pred ---HHHHhhhhHHHHhHHHHHHhhcCCcchhhHHhHHHHHHH-HHHHHHhhhHHHHHH
Q 011783 381 ---SVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIAMTGM-SLFKAAGPAGGGALF 434 (477)
Q Consensus 381 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~-~~g~~~~~~~~g~l~ 434 (477)
..+.-..--..+-+.--++---.|+|.|.++=+....+. .+|-..|..+...+.
T Consensus 380 ~~~~v~~k~~kYsl~dp~kEmly~pld~e~K~K~Ka~iD~v~~r~Gks~gs~i~~~l~ 437 (472)
T TIGR00769 380 AIQNILSKSTKYSLFDATKEMAYIPLDEEQKVKGKAAIDVVAARLGKSGGALIQQGLL 437 (472)
T ss_pred HHHHHHHHHhhhccccHHHHHhcccCCHHHHHHhHhhhhhhhhhhhhHHHHHHHHHHH
Confidence 011111111222222222333457889999888887754 677777777655543
No 199
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=99.19 E-value=2.8e-10 Score=108.65 Aligned_cols=141 Identities=14% Similarity=0.122 Sum_probs=104.2
Q ss_pred HHHHhhhchhchHhHHHHHHHHhcccccchhhhhhhHHHHHHHH-HHHHHHhhhhhhhhhhcCCchhhHHHHHHHHHHHH
Q 011783 49 IVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFM-FGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNT 127 (477)
Q Consensus 49 ~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~g~~~s~~~-~~~~~~~~~~G~l~Dr~Grr~~~~~~~~~~~i~~~ 127 (477)
..++............+.+.+|.|.++++ +|++..... ....++.++.|++.||+|+|+.+..+.++.++..+
T Consensus 216 ~~~l~~~~~~~~~~~~~~~l~~~G~s~~~------ig~~~~~~~~~~~~~g~~~~g~l~~r~g~~~~l~~~~~~~~~~~~ 289 (390)
T TIGR02718 216 LALLSAMTAVSGFGLSKLYLVDAGWPLEW------IGRLGMAGGAVTVLLGCGGGAWLVRRAGLWRTFILGVGLAGSLAL 289 (390)
T ss_pred HHHHHHHHHHHHHHHhhHHHHhcCCCHHH------HHHHHhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHH
Confidence 33444444444455667777789999999 999988876 46677889999999999999999887766533333
Q ss_pred HHHh------hhhHHHHHHHHHHhhhcccchhhH-HHHhhhhccc-cchhhHHHHHHHHhHHHHHHHHhHHHHhhh
Q 011783 128 LFGL------SVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFRE-EHQALGLSTVSTAWGIGLIIGPALGGFLAQ 195 (477)
Q Consensus 128 ~~~~------~~~~~~l~~~r~l~G~~~g~~~~~-~~~i~~~~~~-~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~ 195 (477)
.... .++...+.....+.++..+...+. .+.+.+..++ +++++.+++.+...++|..+||.++|.+.+
T Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~lg~~~g~~~~G~l~~ 365 (390)
T TIGR02718 290 LWFAQAAFWLAPGIAVAWSCSAFGSLITGITSVAIYTAFMRFAGDGDQAGTDVTAVQSTRDLGELIASSIAGYLTD 365 (390)
T ss_pred HHHHHHHcccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 2221 123334445555666667776666 7777777766 889999999999999999999999999998
No 200
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=99.19 E-value=1.2e-10 Score=113.20 Aligned_cols=150 Identities=14% Similarity=0.156 Sum_probs=114.1
Q ss_pred hHHHHHHHHHHHhhhchhchHhHHHHHHHHhcccccchhhhhhhHHHHHHHHHHHHHHhhhhhhhhhhcCCchhhHHHHH
Q 011783 41 TELFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTA 120 (477)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~Grr~~~~~~~~ 120 (477)
+.+..+.+..++..+.........+.+.++...+..+ .+++.+...++..++.+++|+++||+|||+++..+.+
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~i~~ii~~~~~~~l~~r~g~~~~~~~~~~ 295 (437)
T TIGR00792 222 DQLLILCLAYLFYNLAFNIKNGVQVYYFTYVLGDPEL------FSYMGSIAIVAGLIGVLLFPRLVKKFGRKILFAGGIL 295 (437)
T ss_pred HHHHHHHHHHHHHHHHHHHHcchhheeEeeecCChHH------HHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHH
Confidence 3444444455555554444444444444332223444 6788888899999999999999999999999999998
Q ss_pred HHHHHHHHHHhh-hhHHHHHHHHHHhhhcccchhhH-HHHhhhhcc-------ccchhhHHHHHHHHhHHHHHHHHhHHH
Q 011783 121 SVVIFNTLFGLS-VNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFR-------EEHQALGLSTVSTAWGIGLIIGPALGG 191 (477)
Q Consensus 121 ~~~i~~~~~~~~-~~~~~l~~~r~l~G~~~g~~~~~-~~~i~~~~~-------~~~r~~~~~~~~~~~~~g~~~g~~~~~ 191 (477)
+.+++.+...+. ++.+.+++..++.|++.+...+. .++++|..| ++++|...++.+....+|..+++.+.|
T Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~g~~lg~~i~g 375 (437)
T TIGR00792 296 LMVLGYLIFFFAGSNLPLILVLIILAGFGQNFVTGLVWALVADTVDYGEWKTGVRAEGLVYSVRTFVRKLGQALAGFLVG 375 (437)
T ss_pred HHHHHHHHHHHcchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhcCccchHHHHHHHHHHHHHHHHHHHHHHH
Confidence 888887776665 46677778888899998887777 889888875 456799999999999999999999999
Q ss_pred Hhhhc
Q 011783 192 FLAQP 196 (477)
Q Consensus 192 ~l~~~ 196 (477)
.+.+.
T Consensus 376 ~ll~~ 380 (437)
T TIGR00792 376 LILGI 380 (437)
T ss_pred HHHHH
Confidence 99873
No 201
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=99.18 E-value=1.1e-09 Score=107.13 Aligned_cols=147 Identities=18% Similarity=0.170 Sum_probs=119.8
Q ss_pred ccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhhh
Q 011783 308 GLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNLL 387 (477)
Q Consensus 308 ~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 387 (477)
+++++..+.|.+.+...++..++++ ..+++.||+|+|+.+..+.++..++.++..+.... ....+++.-++.+++
T Consensus 70 ~~~~s~~~~g~~~s~~~~~~~~~~~-~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~----~~~~l~~~r~~~G~~ 144 (465)
T TIGR00894 70 NFKWSGALQGLILSSHFYGQIIIQI-PVGYLAGKYVFKWSIGIGMFLSSVISIVIPWAAGG----GIALVVFCRVIQGLA 144 (465)
T ss_pred CCCCCHHHhhHHHHHHHHHHHHHHc-chHHHHHHhCcchhhHHHHHHHHHHHHHHHHHHHc----CchHHHHHHHHHHHh
Confidence 5789999999999999999999998 88999999999999998888777766554433211 122345555666788
Q ss_pred hHHHHhHHHHHHhhcCCcchhhHHhHHHHHHHHHHHHHhhhHHHHHHHH-hhhhccccCCCCchHHHHHHHHHHHHHHHH
Q 011783 388 SVSIITGLFILQNRAVDQDQRGAANGIAMTGMSLFKAAGPAGGGALFSW-AQKRLDASFLPGSQMVFFVLNVVEAIGVLM 466 (477)
Q Consensus 388 ~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~-~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 466 (477)
.+...+....++.+.+|+++|++++|+.+....+|..++|.+.+.+.+. . ||+..|++.+++.++..++
T Consensus 145 ~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~i~~~l~~~l~~~~~----------gw~~~f~i~~~~~~~~~~~ 214 (465)
T TIGR00894 145 QGSVSPATHKIIVKWAPPKERSRLLGMSTSGFQLGTFIFLPISGWLCESWG----------GWPMIFYVFGIVGCAWSLL 214 (465)
T ss_pred cccchhhHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccC----------CCCeehhhhhHHHHHHHHH
Confidence 8888999999999999999999999999999999999999999998875 3 7889999888777666554
Q ss_pred Hhh
Q 011783 467 TFK 469 (477)
Q Consensus 467 ~~~ 469 (477)
.+.
T Consensus 215 ~~~ 217 (465)
T TIGR00894 215 WFV 217 (465)
T ss_pred HHH
Confidence 433
No 202
>PRK10133 L-fucose transporter; Provisional
Probab=99.18 E-value=5.6e-09 Score=100.84 Aligned_cols=150 Identities=9% Similarity=-0.062 Sum_probs=112.4
Q ss_pred hHHHHHHHHHHHhhhhhhHHHHHHhhcCcccCCccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHH
Q 011783 275 LMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVL 354 (477)
Q Consensus 275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 354 (477)
+....+.++.+.+.........|.+- +++|.++.+.|+..+...++..++++ ..+++.||+|||+.+..+..+
T Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~p~i~------~~~~~s~~~~gl~~~~~~~g~~i~~~-~~g~l~dr~G~r~~l~~g~~~ 100 (438)
T PRK10133 28 FALLCSLFFLWAVANNLNDILLPQFQ------QAFTLTNFQAGLIQSAFYFGYFIIPI-PAGILMKKLSYKAGIITGLFL 100 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH------HHhCCCHHHHHHHHHHHHHHHHHHHH-HHHHHHHHhCcHHHHHHHHHH
Confidence 34445555555555555555566542 34899999999999999999999998 899999999999999999998
Q ss_pred HHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhhhhHHHHhHHHHHHhhcCCcchhhHHhHHHHHHHHHHHHHhhhHHHHHH
Q 011783 355 TIPLLTSYPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIAMTGMSLFKAAGPAGGGALF 434 (477)
Q Consensus 355 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~ 434 (477)
..++.++.......+ .+..+.+.-++.+.+.+...+....++.+..|+++++..+++.+....+|..++|.+++.+.
T Consensus 101 ~~~~~~l~~~~~~a~---~~~~ll~~r~l~G~g~g~~~~~~~~~v~~~~~~~~~~~~~s~~~~~~~~G~~~g~~~g~~l~ 177 (438)
T PRK10133 101 YALGAALFWPAAEIM---NYTLFLVGLFIIAAGLGCLETAANPFVTVLGPESSGHFRLNLAQTFNSFGAIIAVVFGQSLI 177 (438)
T ss_pred HHHHHHHHHHHHhcC---CHHHHHHHHHHHHHHHHHHHhhHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 888876643222111 12244445555667777888888888888777676667899999999999999999987765
No 203
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=99.17 E-value=1.9e-09 Score=106.12 Aligned_cols=157 Identities=8% Similarity=-0.053 Sum_probs=116.3
Q ss_pred ccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHHH------hhhhhHHHHHHHHH
Q 011783 308 GLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTIPLLTSYPYIAM------LSGFGLAFLLNCAS 381 (477)
Q Consensus 308 ~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~ 381 (477)
+++.+..+.++..+...++..++++ +.+++.||+|||+.+..+..+..++.+...+... ......+..+++.-
T Consensus 49 ~~~~~~~~~~~~~s~~~ig~~~~~~-~~G~l~dr~Grr~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R 127 (479)
T PRK10077 49 SESAANSLLGFCVASALIGCIIGGA-LGGYCSNRFGRRDSLKIAAVLFFISALGSAWPEFGFTSIGPDNTGYVPEFVIYR 127 (479)
T ss_pred cccCChhHHHHHHHHHHHHHHHHHH-HHHHHHHHhccHHHHHHHHHHHHHHHHHHHhhccccccccccchhHHHHHHHHH
Confidence 3588899999999999999999999 9999999999999999998887766555443210 01112233445555
Q ss_pred HHHhhhhHHHHhHHHHHHhhcCCcchhhHHhHHHHHHHHHHHHHhhhHHHHHHHHhhhhccccCCCCchHHHHHHHHHHH
Q 011783 382 VVKNLLSVSIITGLFILQNRAVDQDQRGAANGIAMTGMSLFKAAGPAGGGALFSWAQKRLDASFLPGSQMVFFVLNVVEA 461 (477)
Q Consensus 382 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 461 (477)
++.|++.+...+...+++.|.+|+++||+++++.+....+|..+++.+.+.+.......... . .||++.|++.++..+
T Consensus 128 ~l~G~~~g~~~~~~~~~i~e~~~~~~rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~-~-~gWr~~f~~~~~~~~ 205 (479)
T PRK10077 128 IIGGIGVGLASMLSPMYIAEIAPAHIRGKLVSFNQFAIIFGQLVVYFVNYFIARSGDASWLN-T-DGWRYMFASEAIPAL 205 (479)
T ss_pred HHHhhhHhHHhhHHHHHHHhhCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHhccCcccccc-c-CChHHHHHHHHHHHH
Confidence 66788889999999999999999999999999999999999988877666554321100000 0 189999998877766
Q ss_pred HHHHHH
Q 011783 462 IGVLMT 467 (477)
Q Consensus 462 ~~~~~~ 467 (477)
+..+..
T Consensus 206 ~~~~~~ 211 (479)
T PRK10077 206 LFLMLL 211 (479)
T ss_pred HHHHHH
Confidence 655443
No 204
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.16 E-value=1e-09 Score=103.78 Aligned_cols=147 Identities=17% Similarity=0.236 Sum_probs=110.6
Q ss_pred HHHHHHHHHHhh-hchhchHhHHHHHHHHhcccccchhhhhhhHHHHHHHHHHHHHHhhhhhhhhhhcCCchhhHHHHHH
Q 011783 43 LFSIWIIVLCTA-LPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTAS 121 (477)
Q Consensus 43 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~Grr~~~~~~~~~ 121 (477)
+.+.....+... -+...+......+.++-|++.++ .-+..........+..+.+..+.||+|||+.++.+..+
T Consensus 271 ~~i~~~v~~~qq~sGi~ai~~Yst~i~~~aG~~~~~------a~~an~~~g~v~~~~t~~~~~lid~~gRRpLll~~~~~ 344 (485)
T KOG0569|consen 271 LLIGIVVSFAQQFSGINAIFFYSTSIFKTAGFTPEE------AQYANLGIGIVNLLSTLVSPFLIDRLGRRPLLLISLSL 344 (485)
T ss_pred HHHHHHHHHHHHhcCcceeHHHHHHHHHHcCCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHH
Confidence 333433444433 44556666667899999999998 88999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhh---hHH------HHHHHHHHhhhcccc-hhhH-HHHhhhhccccchhhHHHHHHHHhHHHHHHHHhHH
Q 011783 122 VVIFNTLFGLSV---NFW------MAVLTRFLLGSLNGL-LGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALG 190 (477)
Q Consensus 122 ~~i~~~~~~~~~---~~~------~l~~~r~l~G~~~g~-~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~ 190 (477)
+.+..+++.... +.. ..+++.++..++-+. ..|. .-+.+|++|++.|..++++.....-+...+-...-
T Consensus 345 ~~~~~~~~~~~~~l~~~~~~~~~y~~i~~~~~~~~~f~~G~gpi~~fi~aELf~~~~R~aa~s~~~~~~w~~~fiv~~~f 424 (485)
T KOG0569|consen 345 MAVALLLMSIALFLSNSFGSWLSYLCIAAIFLFIISFAIGPGPIPWFIGAELFPQSARSAAQSVATAVNWLSNFIVGFAF 424 (485)
T ss_pred HHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhhcCCCchhHHHHHHhCCccchHHHHHHHHHHHHHHHHHHHHHH
Confidence 998888776542 211 123444555554333 5666 88899999999999999999888888877766666
Q ss_pred HHhhh
Q 011783 191 GFLAQ 195 (477)
Q Consensus 191 ~~l~~ 195 (477)
..+.+
T Consensus 425 p~l~~ 429 (485)
T KOG0569|consen 425 PPLQN 429 (485)
T ss_pred HHHHH
Confidence 66655
No 205
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism]
Probab=99.16 E-value=4.8e-10 Score=108.57 Aligned_cols=161 Identities=16% Similarity=0.256 Sum_probs=143.6
Q ss_pred hHHHHHHHHHHHhhhchhchHhHHHHHHHHhcccccchhhhhhhHHHHHHHHHHHHHHhhhhhhhhhhcC--CchhhHHH
Q 011783 41 TELFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYG--RKPVIIMG 118 (477)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~G--rr~~~~~~ 118 (477)
+.++.+.+...+..++.......+|.+.++.+.+..+ .+.+.++..+...++.+..|+++|+.. ++.+..++
T Consensus 298 ~~fl~~~~~~~~~~~g~~~p~~~l~~~~~~~g~~~~~------aa~l~Siigi~~i~gRi~~G~laD~~~~~~~~~~~~~ 371 (509)
T KOG2504|consen 298 PKFLLLALSNLFAYLGFNVPFVYLPSYAKSLGLSSND------AAFLLSIIGVSDIIGRIILGLLADKPGIRALVLFLLT 371 (509)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCChhh------hHHHHHHHHHhhhhhhhhhhhhcCccccchHHHHHHH
Confidence 3456677777888888888888999999999999999 999999999999999999999999988 56678888
Q ss_pred HHHHHHHHHHHHhhhhHHHHHHHHHHhhhcccchhhH-HHHhhhhccccchhhHHHHHHHHhHHHHHHHHhHHHHhhhcc
Q 011783 119 TASVVIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPA 197 (477)
Q Consensus 119 ~~~~~i~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~ 197 (477)
+++.+++...+.++++++.+...-.+.|+..|.+... ..++.|..+.++-..+.|+.....+++.++||+++|.+.+..
T Consensus 372 ll~~gl~~~~~p~~~~~~~l~~~~~~fG~~~g~~~~l~~~i~~~~~g~~~l~~a~Gl~l~~~gi~~l~gpPiag~~~d~t 451 (509)
T KOG2504|consen 372 LLIAGLARLFLPFATTYVGLIVFSILFGFCVGSFSSLTPVILVDLVGLEKLSNAYGLLLLFQGIGALVGPPIAGLLYDIT 451 (509)
T ss_pred HHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChhhcchHHHHHHHHhHHHHHcCcccceeeeecc
Confidence 8899999999999999999999999999999998888 678999999999999999999999999999999999998876
Q ss_pred ccCCcccccc
Q 011783 198 EKYPNLFSSE 207 (477)
Q Consensus 198 ~~~~~~~~~~ 207 (477)
.+|...|...
T Consensus 452 g~Y~~~f~~~ 461 (509)
T KOG2504|consen 452 GNYDHAFYFC 461 (509)
T ss_pred CCeeeehhhc
Confidence 6666555543
No 206
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=99.15 E-value=5.5e-09 Score=103.10 Aligned_cols=164 Identities=12% Similarity=-0.019 Sum_probs=118.0
Q ss_pred cccchhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhhhh
Q 011783 309 LNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNLLS 388 (477)
Q Consensus 309 ~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 388 (477)
.+.+..+.+.+.+...++.+++.+ +.+++.||+|||+.+..+.++..++..+...............+.+.-++.+++.
T Consensus 51 ~~~~~~~~~~~~~~~~ig~~ig~~-~~g~l~d~~Grr~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~ 129 (502)
T TIGR00887 51 GPLPSSVSAAVNGSASIGTLAGQL-FFGWLADKLGRKRVYGMELIIMIIATVASGLSPGSSPKSVMATLCFWRFWLGVGI 129 (502)
T ss_pred ccchHHHHHHHHHHHHHHHHHHHH-HHHHHHHhhccHHHHHHHHHHHHHHHHHHHHccCcccchHHHHHHHHHHHHHHHH
Confidence 345666778899999999999998 9999999999999999888887777665554332111111234555556667888
Q ss_pred HHHHhHHHHHHhhcCCcchhhHHhHHHHHHHHHHHHHhhhHHHHHHHHhhhhc---c----------ccCCCCchHHHHH
Q 011783 389 VSIITGLFILQNRAVDQDQRGAANGIAMTGMSLFKAAGPAGGGALFSWAQKRL---D----------ASFLPGSQMVFFV 455 (477)
Q Consensus 389 ~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~---~----------~~~~~g~~~~~~~ 455 (477)
+...+....+..|.+|++.||++.++.+....+|..+++.+...+........ + .....+|+..+.+
T Consensus 130 g~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~WR~~~~~ 209 (502)
T TIGR00887 130 GGDYPLSAIITSEFATKKWRGAMMAAVFAMQGFGILAGAIVALIVLAGFKHSLEAAADEASCTGSCVPAVDYMWRILIGF 209 (502)
T ss_pred hhhhHHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccccccccccccchhcccHHHHHHH
Confidence 88889999999999999999999999999999999999999887765332100 0 0000179999977
Q ss_pred HHHHHHHHHHHHhhhhhhcc
Q 011783 456 LNVVEAIGVLMTFKPFLAQR 475 (477)
Q Consensus 456 ~~~~~~~~~~~~~~~~~~~~ 475 (477)
.++..++..+... ++||+
T Consensus 210 ~~ip~~i~~~~~~--~lpES 227 (502)
T TIGR00887 210 GAVPALLALYFRL--TIPET 227 (502)
T ss_pred HHHHHHHHHHHHH--hCCCC
Confidence 7666655544433 35553
No 207
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=99.15 E-value=8.5e-10 Score=104.14 Aligned_cols=163 Identities=17% Similarity=0.264 Sum_probs=131.6
Q ss_pred hHHHHHHHHHHHhhhchhchHhHHHHHHHHhc-ccccchhhhhhhHHHHHHHHHHHHHHhhhhhhhhhhcCCchhhHHHH
Q 011783 41 TELFSIWIIVLCTALPISSLFPFLYFMIKDFQ-IAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGT 119 (477)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~s~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~Grr~~~~~~~ 119 (477)
+++....+..++.......+....+.+.+|.| .+.+. .+.+.++..++=.+.-...+++..|+|.|+++.++.
T Consensus 207 ~~~~~Fll~~~l~~~~~~~~~~f~~~yl~~~gg~~~~~------~g~~~~l~~~aEi~~f~~~~~~~~r~g~~~ll~~a~ 280 (400)
T PF03825_consen 207 PRFLVFLLAAFLIGISHAAYYTFFSIYLQELGGYSGST------IGILWALGVVAEIPFFFFSGRFLKRFGIKWLLLLAL 280 (400)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccchhhH------HHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHH
Confidence 44556666777778888888888888889988 56666 788888888888888899999999999999999999
Q ss_pred HHHHHHHHHHHhh-hhHHHHHHH----HHHhhhcccchhhH-HHHhhhhccccchhhHHHHHHH-HhHHHHHHHHhHHHH
Q 011783 120 ASVVIFNTLFGLS-VNFWMAVLT----RFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVST-AWGIGLIIGPALGGF 192 (477)
Q Consensus 120 ~~~~i~~~~~~~~-~~~~~l~~~----r~l~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~-~~~~g~~~g~~~~~~ 192 (477)
+.+++=..+++.. ++.+...+. ..++|+.-+...++ ..++.+.+|++.|+++.++++. ..++|..+|..++|+
T Consensus 281 ~~~~vR~~l~a~~~~~~~~~~~~~~l~q~lhG~tf~~~~~a~~~yi~~~~p~~~~at~Q~l~~~~~~Glg~~iG~~igG~ 360 (400)
T PF03825_consen 281 VAYAVRWLLYAYFSDPWPFIVALQLLGQLLHGLTFGLFHAASVRYIDRIAPPELRATAQGLYSALSFGLGGAIGSLIGGW 360 (400)
T ss_pred HHHHHHHHHHHHhcCCcHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHhCCccchHHHHHHHHHHHhhHHHHHHHHHHHH
Confidence 9999998888887 554443333 45699998888877 9999999999999999998876 478999999999999
Q ss_pred hhhccccCCccccccccc
Q 011783 193 LAQPAEKYPNLFSSESLF 210 (477)
Q Consensus 193 l~~~~~~~~~~~~~~~~~ 210 (477)
+.+. .+-+..+.|...|
T Consensus 361 l~~~-~g~~~~~~~~~~~ 377 (400)
T PF03825_consen 361 LYDA-FGARGMFDWSAVF 377 (400)
T ss_pred HHHH-hcchhhhhHHHHH
Confidence 9984 2344455555554
No 208
>KOG3098 consensus Uncharacterized conserved protein [Function unknown]
Probab=99.15 E-value=1.1e-07 Score=89.36 Aligned_cols=332 Identities=13% Similarity=0.023 Sum_probs=199.1
Q ss_pred HHHHHHHHHHHhhhhhhhhhhcCCchhhHHHHHHHHHHHHHHHhhhhHHHHHHHHHHhhhcccchhhH-HHHhhhhcccc
Q 011783 88 GSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREE 166 (477)
Q Consensus 88 ~s~~~~~~~~~~~~~G~l~Dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~-~~~i~~~~~~~ 166 (477)
.++-.....+.+++.+.+.|+.|.|+.+.++...+....+.+-+.+ -+-++..-.+.|+|.+..+.. ..+++|..++|
T Consensus 56 ~aiiY~~ftv~~l~~psiv~~i~~K~~lv~ga~~y~~f~~gfl~~N-~y~~yfssallG~Gaallw~GqG~ylt~~st~~ 134 (461)
T KOG3098|consen 56 QAIIYAFFTVSCLFAPSIVNFLGPKWALVIGATCYAAFPLGFLFPN-SYYLYFSSALLGFGAALLWTGQGGYLTSNSTRE 134 (461)
T ss_pred HHHHHHHHHHHHHhhHHHHHHhhHHHHHHHHhHHHHHHHHHHHhcc-hHHHHHHHHHhhhhHHheecccceehhhcCChh
Confidence 6777778889999999999999999999999999998888876654 566788889999999999998 99999999999
Q ss_pred chhhHHHHHHHHhHHHHHHHHhHHHHhhhccccC-Cccccc-ccc----cccc-cchHHHHHHHHHhhc-cccccCCCCC
Q 011783 167 HQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKY-PNLFSS-ESL----FGKF-PYFLPCLCISLFAFG-ETLHRHNDDD 238 (477)
Q Consensus 167 ~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~-~~~~~~-~~~----~~~~-~~~~~~~~~~~~~l~-~~~~~~~~~~ 238 (477)
.+.+..++.......+.++|..+-..+..+...- ....+- +.. +... ...+..++.....+. ......+.++
T Consensus 135 tie~Nisi~Wai~~~~li~Ggi~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~v~~~~~~l~~i~~~~~p~~~ 214 (461)
T KOG3098|consen 135 TIERNISIFWAIGQSSLIIGGIILFIYFQFSSSSAIITDGTRRLVFEVLFIDFEIKVLFGVLLAISVLSIINFDFLPSKD 214 (461)
T ss_pred hHHHHHHHHHHHHHHHHHhhhHhheeeeEecccccccccchhhhhcchhhhhHHHHHHHHHHHHHHHHHhhheeecCccc
Confidence 9999999988888888888876665554322210 000000 000 0000 000011111110010 1111111111
Q ss_pred CccchhhhhhhhhhccchhhcccCCchhhhhhcchhhHHHHHHHHHHHhhhhhhHHHHHHhhcCcccCCccccch-hhhH
Q 011783 239 DSCDVSYDALESASAEVKEEEGREATPKKSLLKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYST-QMVG 317 (477)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~-~~~g 317 (477)
...+.. .. + +...+..+..-+++++++...+...++...+...-+...+|..+... ...+.+. ...+
T Consensus 215 ~~~~~~-~~-~-------~~~~~~l~~~~~l~~~~~ml~L~~~f~~tG~~~Sf~~~iypt~i~ft---~~~~~n~~~~~a 282 (461)
T KOG3098|consen 215 VVNCKS-SS-E-------TSFSELLKLTFKLLKTPKMLLLFPFFFYTGLETSFWISIYPTCISFT---RKLGSNTTYLIA 282 (461)
T ss_pred hhhhhh-hc-c-------ccHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHhccchhhhhh---hhccCcchhHHH
Confidence 000000 00 0 00111122344566778777766666555444444444444433221 1122222 2345
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHh---hcchhHHHHHHHHHHHHHHHHHHHHHhhhh------------hHHHHHHHHHH
Q 011783 318 EVLAITGFSLLVFQLSLYPFLERI---LGPIMVARIAGVLTIPLLTSYPYIAMLSGF------------GLAFLLNCASV 382 (477)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~l~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~ 382 (477)
+.....+++.++++. ..+.+.|| +|+++.+..+..+-.+.+++.-.....+.+ .......++.+
T Consensus 283 i~~~~~g~g~v~~g~-~~~~l~~rir~fg~~~~~~~~~~~~~~~~~li~l~~p~dap~~~t~~~~~~~~~~~~~~~ii~~ 361 (461)
T KOG3098|consen 283 IYSIGIGLGEVIGGL-DFSILSKRIRGFGRKPTVLIGIIIHLIGFLLIHLSFPNDAPLRPTDSPPLLFTPSYYLALIIGF 361 (461)
T ss_pred HHHHHHhHHHHHHHH-HHHHHhhhhhhcccCcchhHHHHHHHHHHHHHhccccccCCCCCCcccccccccchhHHHHHHH
Confidence 555566677777666 55666554 567787777777666665544333221110 01335566667
Q ss_pred HHhhhhHHHHhHHHHHHhhcCCcchhhHHhHHHHHHHHHHHHHhhhHHHHHH
Q 011783 383 VKNLLSVSIITGLFILQNRAVDQDQRGAANGIAMTGMSLFKAAGPAGGGALF 434 (477)
Q Consensus 383 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~ 434 (477)
+.|+.-.......+.++.... +++|.++.++.-.-..++..++-+......
T Consensus 362 l~G~~D~~~~t~~~~ii~~~~-~~~~~~~fsi~kfyq~~~s~v~~f~~~~~~ 412 (461)
T KOG3098|consen 362 LLGFGDACFNTQRYVIIALLY-PDDRAQAFSLFKFYQSVASCVAFFFSPYLL 412 (461)
T ss_pred HHhhHHHHHHHHHHHHHHHHh-cCchHHHHHHHHHHHHHHHHHHhhhhhhhH
Confidence 778888888889999999988 477999998888877777777666544443
No 209
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=99.13 E-value=3.8e-09 Score=114.97 Aligned_cols=187 Identities=16% Similarity=0.090 Sum_probs=120.9
Q ss_pred hhhhcchhhHHHHHHHHHHHhhhhhhHHHHHHhhcCcccCCcccc-chhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcch
Q 011783 267 KSLLKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNY-STQMVGEVLAITGFSLLVFQLSLYPFLERILGPI 345 (477)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~-~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 345 (477)
+.+++++.+..+....++..+........++.+.... .....+. +....++..+...+...+.++ +.|++.||++||
T Consensus 5 ~~l~~~~~f~~l~~~~~~~~~~~~~~~~~l~~~~~~~-~~~~~~~~~~~~~~l~~~~~~l~~~l~~~-~~G~laDr~~rk 82 (1140)
T PRK06814 5 LYLMKSRRFAPLFWTQFFGAFNDNFLKNALVILILYG-LSGALGAYNNALVTLAGAVFILPFFIFSA-LAGQLADKYDKA 82 (1140)
T ss_pred hhhhhccccHHHHHHHHHhHHHHHHHHHHHHHHHHHH-hccccccchHHHHHHHHHHHHHHHHHHhh-hHHhhhhhccHH
Confidence 3467777777766666665544332222212111111 1111222 234467777788888888888 899999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhhhhHHHHhHHHHHHhhcCCcchhhHHhHHHHHHHHHHHHH
Q 011783 346 MVARIAGVLTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIAMTGMSLFKAA 425 (477)
Q Consensus 346 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~ 425 (477)
+++.....+..+............ ....+++..++.+++.+...|...+++.+.+|++++++++|+.++...+|..+
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~---s~~~l~~~~~l~gi~~a~~~p~~~a~l~~~~~~~~~~~a~~~~~~~~~ig~~i 159 (1140)
T PRK06814 83 KLAKILKFAEIGIAALAIYGFHLN---SVPLLFAALFLMGIHSALFGPIKYSILPDHLNKDELLGANALVEAGTFIAILL 159 (1140)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHh---hHHHHHHHHHHHHHHHHhhchHHHHhhHhhcCccccchhhHHHHHHHHHHHHH
Confidence 976443222222221111111111 12244555666678888889999999999999999999999999999999999
Q ss_pred hhhHHHHHHHHhhhhccccCCCCchHHHHHHHHHHHHHHHHHh
Q 011783 426 GPAGGGALFSWAQKRLDASFLPGSQMVFFVLNVVEAIGVLMTF 468 (477)
Q Consensus 426 ~~~~~g~l~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 468 (477)
||.++|.+.+.. +|+..|+..+++.+++.++..
T Consensus 160 gp~l~g~l~~~~----------~~~~~~~~~~~~~~~~~~~~~ 192 (1140)
T PRK06814 160 GTIIGGLATISG----------NFVILVALLMGIAVLGWLASL 192 (1140)
T ss_pred HHHHHHHHHhcc----------ccHHHHHHHHHHHHHHHHHHh
Confidence 999999999877 788888555555554444433
No 210
>KOG3762 consensus Predicted transporter [General function prediction only]
Probab=99.13 E-value=6.9e-09 Score=96.71 Aligned_cols=178 Identities=13% Similarity=0.139 Sum_probs=125.6
Q ss_pred hhhcchhhHHHHHHHHHHHhhhhhhHHHHHHhhcCcccCCccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcchhH
Q 011783 268 SLLKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMV 347 (477)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 347 (477)
+++.++.....++...+.........+++-.+++ +.+-.+..-|......-.+.++.-+ +.+++.+|+|+.++
T Consensus 366 ~~~~s~~~llff~~av~mG~g~~lv~tFLfWHle------d~~~~~~LfGv~~a~~~~gEI~~~f-fs~klI~kiGHv~v 438 (618)
T KOG3762|consen 366 KVFASPHILLFFFVAVVMGAGVGLVFTFLFWHLE------DLGGIKTLFGVVSALCHAGEILFYF-FSFKLIEKIGHVNV 438 (618)
T ss_pred HHhcCCCEEehhHHHHHHHHHHHHHHHHHHHHHh------hcCCcceeeeehhhhhccchHHHHH-HHHHHHHHhcccce
Confidence 4566666555444444444333333333322333 2565666667666666666666655 88899999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhhhhHHHHhHHHHHHhhcCCcchhhHHhHHHHHHH-HHHHHHh
Q 011783 348 ARIAGVLTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIAMTGM-SLFKAAG 426 (477)
Q Consensus 348 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~-~~g~~~~ 426 (477)
+.+++.+..+=++.+.+..+.+ ..+..-++.+...+..+....+|++...||+.+.++.++..... .+|-.+|
T Consensus 439 ~~lgLa~~~~Rf~~~S~L~n~W------~vLPieilqgit~aliWaa~~sY~s~vaPp~l~at~Q~l~~g~f~GlG~g~G 512 (618)
T KOG3762|consen 439 MYLGLACNVGRFLYYSYLQNPW------MVLPIEILQGITHALIWAAIISYASHVAPPGLRATAQGLLQGIFHGLGKGLG 512 (618)
T ss_pred eeehhhHHHHHHHHHHHhcCch------heeeHHHHHHHHHHHHHHHHHHHHHhhCCCcchHHHHHHHHHHhcccCcchh
Confidence 9999888877777666655422 33444455667778889999999999999999999999998855 8899999
Q ss_pred hhHHHHHHHHhhhhccccCCCCchHHHHHHHHHHHHHHHHHh
Q 011783 427 PAGGGALFSWAQKRLDASFLPGSQMVFFVLNVVEAIGVLMTF 468 (477)
Q Consensus 427 ~~~~g~l~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 468 (477)
.+++|.+.+.+ |-+..|..+++.+++.++...
T Consensus 513 slIGG~~v~~f----------g~~ttf~~~giAcl~~l~~~~ 544 (618)
T KOG3762|consen 513 SLIGGFVVERF----------GARTTFRIFGIACLVTLALFI 544 (618)
T ss_pred hhhhhhhheee----------hhHHHHHHHHHHHHHHHHHHH
Confidence 99999999988 666788777776666655443
No 211
>TIGR00901 2A0125 AmpG-related permease.
Probab=99.13 E-value=7.1e-10 Score=104.53 Aligned_cols=132 Identities=15% Similarity=0.128 Sum_probs=105.7
Q ss_pred HHHHHHHHHHhhhchhchHhHHHHHHHHhcccccchhhhhhhHHHHHHHH-HHHHHHhhhhhhhhhhcCCchhhHHHHHH
Q 011783 43 LFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFM-FGRALTSVFWGLVADRYGRKPVIIMGTAS 121 (477)
Q Consensus 43 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~g~~~s~~~-~~~~~~~~~~G~l~Dr~Grr~~~~~~~~~ 121 (477)
++.+.+..++............|.+.+++|.+.++ .+.+.++.. ++..++.+++|++.||+|||+.+..+.++
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~------~g~~~~~~~~~~~~~g~~~~g~l~~r~g~~~~l~~~~~~ 284 (356)
T TIGR00901 211 ALLLLLLIVLYKLGDSAATVLTTLFLLDMGFSKEE------IALVAKINGLLGAILGGLIGGIIMQPLNILYALLLFGIV 284 (356)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHH------HHHHhHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHH
Confidence 44444445555555566667778777779999988 898887765 67789999999999999999999988888
Q ss_pred HHHHHHHHHhh-----------hhHHHHHHHHHHhhhcccchhhH-HHHhhhhccccchhhHHHHHHHHhH
Q 011783 122 VVIFNTLFGLS-----------VNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWG 180 (477)
Q Consensus 122 ~~i~~~~~~~~-----------~~~~~l~~~r~l~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~ 180 (477)
.++...+..+. ++.+.+....++.+++.+...+. .+++.|.+|+++|++.+++.+...+
T Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~ 355 (356)
T TIGR00901 285 QALTNAGFVWLASNGHHDGITFPHLLMLFLTITLEAVTGGLGTVAFVAFLSKLSNPKFGATQMALLSSLSA 355 (356)
T ss_pred HHHHHHHHHHHHhcCcccccccchHHHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHh
Confidence 87776655543 45677888889999999988887 9999999999999999999887654
No 212
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism]
Probab=99.12 E-value=6.5e-11 Score=108.23 Aligned_cols=150 Identities=14% Similarity=0.067 Sum_probs=129.5
Q ss_pred ccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhhh
Q 011783 308 GLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNLL 387 (477)
Q Consensus 308 ~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 387 (477)
.+|.++...|++.....+...+.++ +.+++.||++|++++..|..+-.++.+.-.+.. ++..+.++=.+.|++
T Consensus 62 ~fni~~s~~Gll~~vf~v~~~i~sP-l~gyLadryNR~~v~~vG~~iW~~Av~~~~fs~------~Fwq~~l~R~~vGiG 134 (493)
T KOG1330|consen 62 YFNISDSELGLLQTVFIVVFMIASP-LFGYLADRYNRKRVIAVGIFIWTLAVFASGFSN------HFWQVLLCRGFVGIG 134 (493)
T ss_pred hcCCCchhccchhHHHHHHHHHHHH-HHHHHHhhcCcceEEeeHHHHHHHHHHHHHHHH------HHHHHHHHHHHhccc
Confidence 3899999999999999999999999 999999999999999999988888877766653 344556666677889
Q ss_pred hHHHHhHHHHHHhhcCCcchhhHHhHHHHHHHHHHHHHhhhHHHHHHHHhhhhccccCCCC-chHHHHHHHHHHHHHHHH
Q 011783 388 SVSIITGLFILQNRAVDQDQRGAANGIAMTGMSLFKAAGPAGGGALFSWAQKRLDASFLPG-SQMVFFVLNVVEAIGVLM 466 (477)
Q Consensus 388 ~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~g-~~~~~~~~~~~~~~~~~~ 466 (477)
.....|..++++++.+|.++|++++++.+.....|..+|-.+++.+.++. + |++.|...+++.++..++
T Consensus 135 eAs~~~ia~s~IaD~f~~~~Rs~~~~ify~~ipvGsglG~vvgs~va~~~----------~~Wr~af~~~avl~vi~~~L 204 (493)
T KOG1330|consen 135 EASYSPIAPSLIADSFPDDKRSRVLGIFYFAIPVGSGLGYVVGSVVASLT----------FWWRWAFRGSAVLGVIVGLL 204 (493)
T ss_pred hhhhcccchhHhhhcCcchhhhHHHHHhhhhcccccceeEEeeeeeccCc----------cceEEEEEeehHHHHHHHHH
Confidence 99999999999999999999999999999999999999999888888776 4 999999999998888777
Q ss_pred Hhhhhhhcc
Q 011783 467 TFKPFLAQR 475 (477)
Q Consensus 467 ~~~~~~~~~ 475 (477)
... +.+|+
T Consensus 205 ~~~-f~~eP 212 (493)
T KOG1330|consen 205 VFL-FVREP 212 (493)
T ss_pred HHh-hccCc
Confidence 665 45544
No 213
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.12 E-value=7.4e-10 Score=99.26 Aligned_cols=146 Identities=20% Similarity=0.235 Sum_probs=128.1
Q ss_pred CccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhh
Q 011783 307 GGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNL 386 (477)
Q Consensus 307 ~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 386 (477)
...+-+..++|++++...+..++.+. +.|.+.||+|+|..+..|+.++...-+++++....+ .+++.=.+.++
T Consensus 99 ~~~~~e~~~iG~LFaskA~~qllvnp-~~G~l~~~iGy~ipm~~Gl~vmf~sTilFafg~sy~------~l~vAR~LQgv 171 (464)
T KOG3764|consen 99 ISLDRENTQIGLLFASKALVQLLVNP-FFGNLIDRIGYKIPMVAGLFVMFLSTILFAFGNSYP------MLFVARSLQGV 171 (464)
T ss_pred cCccccccchhHHHHHHHHHHHHhcc-cchhhHHHhccccHHHHHHHHHHHHHHHHHHcchhH------HHHHHHHHhhh
Confidence 34666788899999999999999999 888999999999999999999999988888876533 45555566778
Q ss_pred hhHHHHhHHHHHHhhcCCcch-hhHHhHHHHHHHHHHHHHhhhHHHHHHHHhhhhccccCCCCchHHHHHHHHHHHHHHH
Q 011783 387 LSVSIITGLFILQNRAVDQDQ-RGAANGIAMTGMSLFKAAGPAGGGALFSWAQKRLDASFLPGSQMVFFVLNVVEAIGVL 465 (477)
Q Consensus 387 ~~~~~~~~~~~~~~~~~~~~~-~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 465 (477)
+.........+++++.+|+|. |++++|+.-.+..+|-.+||.++|.+++.. |++.+|+++++++++...
T Consensus 172 gsA~~~tsglamlAd~f~~d~er~~vmGialgfislG~lvgPpfGGilYe~~----------Gk~aPFlVL~~v~Lld~~ 241 (464)
T KOG3764|consen 172 GSAFADTSGLAMLADVFPEDNERGSVMGIALGFISLGVLVGPPFGGILYEFA----------GKSAPFLVLAIVLLLDGA 241 (464)
T ss_pred hHHHHHhhhHHHHHHHcccchhhhHHHHHHHHHHhccceecCCcccchHhhc----------CCcCcHHHHHHHHHHHHH
Confidence 888889999999999999775 699999999999999999999999999998 999999999999999888
Q ss_pred HHhh
Q 011783 466 MTFK 469 (477)
Q Consensus 466 ~~~~ 469 (477)
+-++
T Consensus 242 L~l~ 245 (464)
T KOG3764|consen 242 LQLL 245 (464)
T ss_pred HHHh
Confidence 7766
No 214
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=99.12 E-value=2.2e-09 Score=98.30 Aligned_cols=146 Identities=16% Similarity=0.117 Sum_probs=110.2
Q ss_pred hHHHHHHHHHHHhhhchhchHhHHHHHHHH---hcccccchhhhhhhHHHHHHHHHHHHHHhhhhhhhhhhcCCchhhHH
Q 011783 41 TELFSIWIIVLCTALPISSLFPFLYFMIKD---FQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIM 117 (477)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~s~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~Grr~~~~~ 117 (477)
+.+....++.++.......+....+.+.+| +|.++++ .++..+.+..+..++.+..+++.||+|+|+.+.+
T Consensus 140 ~~~~l~~~~~f~yvg~e~~~~~w~~~yl~~~~~~g~s~~~------a~~~~s~~~~~~~iGr~~~~~l~~r~g~~~~l~~ 213 (310)
T TIGR01272 140 THLVLGALGIFVYVGAEVSAGSFLVNFLSDPHALGLPEDQ------AAHFTAYTWGGAMVGRFIGSAVMPMISQGRYLAF 213 (310)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHH
Confidence 344444455555444555666666755543 6888888 9999999999999999999999999999999988
Q ss_pred HHHHHHHHHHHHHhhhhHHHHHHHHHHhhhcccchhhH-HHHhhhhccccchhhHHHHHHHHhHHHHHHHHhHHHHhhh
Q 011783 118 GTASVVIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQ 195 (477)
Q Consensus 118 ~~~~~~i~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~ 195 (477)
+.++..++.++....++... ...-++.|++.+...|. .+...+..|++ .+++.++. ....+|..++|++.|.+.+
T Consensus 214 ~~~l~~~~~~l~~~~~~~~~-~~~~~l~g~~~s~i~P~~~s~a~~~~~~~-~~~asai~-~~~~~Gg~i~P~l~G~lad 289 (310)
T TIGR01272 214 NAFLAVLLSIGAALTHGYVA-MWFVLALGLFNSIMFPTIFSLALNALGRH-TSQGSGIL-CLAIVGGAIVPLLQGSLAD 289 (310)
T ss_pred HHHHHHHHHHHHHHcCCHHH-HHHHHHHHHHHHHHHHHHHHHHHhhhhhh-hhhhHHHH-HHHHhcchHHHHHHHHHHH
Confidence 88888887766655554332 23555788998888888 88888887753 45666665 5667899999999999988
No 215
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=99.11 E-value=3.2e-09 Score=96.46 Aligned_cols=147 Identities=17% Similarity=0.082 Sum_probs=117.7
Q ss_pred CccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhh
Q 011783 307 GGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNL 386 (477)
Q Consensus 307 ~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 386 (477)
+++++|+.|.+++.++..+.+.+.++ ..+.+.||+|.|+....+.++..+-++.+.+....++. +..+. +.++.+
T Consensus 42 ~~~~LS~~q~~ll~aiPil~GallRl-~~g~l~drfGgR~~~~~s~~l~~IP~~~~~~a~~~~~~--~~ll~-~gll~G- 116 (417)
T COG2223 42 SDFGLSEGQKGLLVAIPILVGALLRL-PYGFLTDRFGGRKWTILSMLLLLIPCLGLAFAVTYPST--WQLLV-IGLLLG- 116 (417)
T ss_pred cccCCCHHHHHHHHHHHHHHhHHHHH-HHHhhhcccCchHHHHHHHHHHHHHHHHHHHHccCCch--HHHHH-HHHHHh-
Confidence 55999999999999999999999999 88999999999999999999988888877777664433 22332 223323
Q ss_pred hhHHHHhHHHHHHhhcCCcchhhHHhHHHHHHHHHHHHHhhhHHHHHHHHhhhhccccCCCC---chHHHHHHHHHHHHH
Q 011783 387 LSVSIITGLFILQNRAVDQDQRGAANGIAMTGMSLFKAAGPAGGGALFSWAQKRLDASFLPG---SQMVFFVLNVVEAIG 463 (477)
Q Consensus 387 ~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~g---~~~~~~~~~~~~~~~ 463 (477)
..++.+......+++.+|+|++|.++|+.. .+++|..+...++..+.... | |+.+..+.....++.
T Consensus 117 ~~GasFav~m~~~s~~fP~~~qG~AlGI~g-~GN~G~av~q~~~P~v~~~~----------g~~~w~~~~~i~~~~l~v~ 185 (417)
T COG2223 117 LAGASFAVGMPNASFFFPKEKQGLALGIAG-AGNLGVAVAQLVAPLVAVAF----------GFLAWRNVAGIYVVALAIA 185 (417)
T ss_pred cccceehcccccccccCChhhhhHHHHHhc-cccccHHHHHHHHHHHHHHH----------hhHHHHHHHHHHHHHHHHH
Confidence 335566677778899999999999999988 99999999999999998887 6 777777777777776
Q ss_pred HHHHhh
Q 011783 464 VLMTFK 469 (477)
Q Consensus 464 ~~~~~~ 469 (477)
.+..++
T Consensus 186 ~v~~~~ 191 (417)
T COG2223 186 AVLAWL 191 (417)
T ss_pred HHHHHH
Confidence 665554
No 216
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=99.11 E-value=1e-08 Score=99.29 Aligned_cols=145 Identities=10% Similarity=-0.087 Sum_probs=101.8
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHHHhhh--hhHHHHHHHHHHHHhhhhHHHHh
Q 011783 316 VGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTIPLLTSYPYIAMLSG--FGLAFLLNCASVVKNLLSVSIIT 393 (477)
Q Consensus 316 ~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~ 393 (477)
.+..+....++..++++ +.|++.||+|||+.+..+..+..++.+...+.+.... ......+.+.=++.|++.++..+
T Consensus 65 ~~~~~~~~~~~~~ig~~-~~G~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~g~g~~~~ 143 (432)
T PRK10406 65 TAGVFAAGFLMRPIGGW-LFGRIADKHGRKKSMLISVCMMCFGSLVIACLPGYETIGTWAPALLLLARLFQGLSVGGEYG 143 (432)
T ss_pred HHHHHHHHHHHHHHHHH-HHHHHHHhcCcHHHHHHHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHHHHHHhhhhhhHh
Confidence 34444555555668887 8999999999999999999988888777665443211 11122344455566778888899
Q ss_pred HHHHHHhhcCCcchhhHHhHHHHHHHHHHHHHhhhHHHHHHHHhhhhc-cccCCCCchHHHHHHHHHHHHHH
Q 011783 394 GLFILQNRAVDQDQRGAANGIAMTGMSLFKAAGPAGGGALFSWAQKRL-DASFLPGSQMVFFVLNVVEAIGV 464 (477)
Q Consensus 394 ~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~-~~~~~~g~~~~~~~~~~~~~~~~ 464 (477)
...+++.|..|+++||++.++.......|..+++.+...+.....+.. .. .||+..|++.++..++..
T Consensus 144 ~~~~~i~e~~p~~~rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~---~gWr~~F~i~~~~~ll~~ 212 (432)
T PRK10406 144 TSATYMSEVAVEGRKGFYASFQYVTLIGGQLLALLVVVVLQQTLEDAELRE---WGWRIPFALGAVLAVVAL 212 (432)
T ss_pred hHHHHHHHhCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHhc---cchHHHHHHHHHHHHHHH
Confidence 999999999999999999998887777888877776555443221100 00 189999998777666543
No 217
>TIGR00898 2A0119 cation transport protein.
Probab=99.10 E-value=5e-10 Score=110.89 Aligned_cols=107 Identities=18% Similarity=0.062 Sum_probs=87.1
Q ss_pred HHHHHHHHHHHhhhhhhhhhhcCCchhhHHHHHHHHHHHHHHHhhhhH--HHHHHHHHHhhhcccchhhH-HHHhhhhcc
Q 011783 88 GSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLSVNF--WMAVLTRFLLGSLNGLLGPI-KAYACEIFR 164 (477)
Q Consensus 88 ~s~~~~~~~~~~~~~G~l~Dr~Grr~~~~~~~~~~~i~~~~~~~~~~~--~~l~~~r~l~G~~~g~~~~~-~~~i~~~~~ 164 (477)
.....+....+.++.+++.||+|||+.+.++.++.+++.++..+.++. +...+.-++.+++.+...+. ..+.+|.+|
T Consensus 361 ~~~~~~~~i~~~~~~~~l~dr~grr~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p 440 (505)
T TIGR00898 361 LFISGLVELPAKLITLLLIDRLGRRYTMAASLLLAGVALLLLLFVPVDLYFLRTALAVLGKFGITSAFQMVYLYTAELYP 440 (505)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHHHHHHHHHHHHHhccccc
Confidence 344556677888999999999999999999999988888877776543 44455556666666665566 899999999
Q ss_pred ccchhhHHHHHHHHhHHHHHHHHhHHHHhhh
Q 011783 165 EEHQALGLSTVSTAWGIGLIIGPALGGFLAQ 195 (477)
Q Consensus 165 ~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~ 195 (477)
++.|++++|+.+....+|.+++|.+.+ +.+
T Consensus 441 ~~~r~~~~g~~~~~~~ig~~i~p~i~~-~~~ 470 (505)
T TIGR00898 441 TVVRNLGVGVCSTMARVGSIISPFLVY-LGE 470 (505)
T ss_pred HHHHhhhHhHHHHHHHHHHHHHhHHHH-HHH
Confidence 999999999999999999999999988 443
No 218
>PF13347 MFS_2: MFS/sugar transport protein
Probab=99.10 E-value=1.5e-09 Score=104.92 Aligned_cols=150 Identities=18% Similarity=0.204 Sum_probs=127.5
Q ss_pred hhHHHHHHHHHHHhhhchhchHhHHHHHHHHhcccccchhhhhhhHHHHHHHHHHHHHHhhhhhhhhhhcCCchhhHHHH
Q 011783 40 ITELFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGT 119 (477)
Q Consensus 40 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~Grr~~~~~~~ 119 (477)
.|.+..+....++..+.........+++.++.--+++. .+.+..+..++..++.+++++++||+|+|+.+..+.
T Consensus 224 nr~~~~l~~~~~~~~~~~~~~~~~~~y~~~~vl~~~~~------~~~~~~~~~~~~~v~~~~~~~l~~r~gk~~~~~~~~ 297 (428)
T PF13347_consen 224 NRPFRILLLAFFLQWLAFALMNTFLPYYFTYVLGNEGL------ISIFMLIFFVASIVGSPLWGRLSKRFGKKKVYIIGL 297 (428)
T ss_pred cchHHHHHHHHHHHHhhhhhhhhHHHHHHHHHhcCchh------hHHHHHHHHHHHHHHHHHHHHHHHHccceeehhhhH
Confidence 34566677777888888888887888777664434455 788889999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhh--hHHHHHHHHHHhhhcccchhhH-HHHhhhhccc-------cchhhHHHHHHHHhHHHHHHHHhH
Q 011783 120 ASVVIFNTLFGLSV--NFWMAVLTRFLLGSLNGLLGPI-KAYACEIFRE-------EHQALGLSTVSTAWGIGLIIGPAL 189 (477)
Q Consensus 120 ~~~~i~~~~~~~~~--~~~~l~~~r~l~G~~~g~~~~~-~~~i~~~~~~-------~~r~~~~~~~~~~~~~g~~~g~~~ 189 (477)
++.+++.++..+.+ |.+.+++.-++.|++.+...+. .++++|..+. ++.|..++..+....+|..+++.+
T Consensus 298 ~~~~~~~~~~~~~~~~~~~~~~i~~~l~gi~~~~~~~~~~a~~ad~id~~e~~tg~r~~g~~~s~~~~~~k~~~~la~~i 377 (428)
T PF13347_consen 298 LLAALGFLLLFFLGPGSPWLVLILFILAGIGYGAFFVIPWAMLADVIDYDEWKTGRRREGMYFSVNSFFIKIGQGLAGAI 377 (428)
T ss_pred HHHHHHHHHHHHHHhhhHHHHHHHHHHhHhhhcccccccccccccchhhHHHhcCCCchHHHHHhhhhhhHHHHHHHHHH
Confidence 99999999988886 9999999999999999988887 9999998873 345888889999999999999998
Q ss_pred HHHhhh
Q 011783 190 GGFLAQ 195 (477)
Q Consensus 190 ~~~l~~ 195 (477)
.+.+.+
T Consensus 378 ~g~~l~ 383 (428)
T PF13347_consen 378 VGLLLA 383 (428)
T ss_pred HHHHHH
Confidence 888776
No 219
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=99.10 E-value=1.2e-08 Score=97.87 Aligned_cols=165 Identities=16% Similarity=0.119 Sum_probs=118.3
Q ss_pred HHHHHHhhhhhhHHHHHHhhcCcccCCccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHhh-----cchh-HHHHHHHH
Q 011783 281 VYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERIL-----GPIM-VARIAGVL 354 (477)
Q Consensus 281 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~-----~~~~-~~~~~~~~ 354 (477)
.++.............|.|+.+ .|+|.+++|++...... .+..+ +.+++.||+ |||+ .+..+..+
T Consensus 7 l~~~~~~~~~~~~~~~~~~l~~------~g~~~~~ig~~~~~~~~--~~~~~-l~g~~~Dr~~~~~~g~rr~~l~~~~~~ 77 (402)
T PRK11902 7 LGFASGLPLALTSGTLQAWMTV------EGLDIQTIGFFSLVGQA--YIFKF-LWAPLMDRYTPPLLGRRRGWLLLTQVG 77 (402)
T ss_pred HHHHHhhhHHHHHHHHHHHHHH------cCCCHHHHHHHHHHHHH--HHHHH-HHHHHHHcccccCCCcchhHHHHHHHH
Confidence 3444444444555667777765 79999999988666554 46666 889999999 6665 56666666
Q ss_pred HHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhhhhHHHHhHHHHHHhhcCCcchhhHHhHHHHHHHHHHHHHhhhHHHHHH
Q 011783 355 TIPLLTSYPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIAMTGMSLFKAAGPAGGGALF 434 (477)
Q Consensus 355 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~ 434 (477)
.+++...+.+..... ..+ .+....++.+++.....+...+++.|.+|+++|+++.++......+|..+++.+.+.+.
T Consensus 78 ~~l~~~~l~~~~~~~--~~~-~l~~~~~~~~~~~~~~~~~~~al~~~~~~~~~r~~~~~~~~~g~~~g~i~g~~l~~~l~ 154 (402)
T PRK11902 78 LAASIAAMAFCPPHA--ALW-PLAGLAVLVAFLSASQDIVFDAYSTDVLHPEERGAGAAVKVLGYRLAMLVSGGLALWLA 154 (402)
T ss_pred HHHHHHHHHhcCccc--hHH-HHHHHHHHHHHHHHHHHHHHHHHHHHhcChhhhhHHHHHHHHHHHHHHHHHhHHHHHHH
Confidence 666666554442211 122 23333333456677788888999999999999999999999988999999999999887
Q ss_pred HH-hhhhccccCCCCchHHHHHHHHHHHHHHHHH
Q 011783 435 SW-AQKRLDASFLPGSQMVFFVLNVVEAIGVLMT 467 (477)
Q Consensus 435 ~~-~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 467 (477)
+. . ||+..|++.+++.++..+..
T Consensus 155 ~~~~----------gw~~~f~i~a~~~l~~~l~~ 178 (402)
T PRK11902 155 DRVL----------GWGNTYLLMAGLMLAGALTT 178 (402)
T ss_pred hccc----------CHHHHHHHHHHHHHHHHHHH
Confidence 74 3 89999999888777665543
No 220
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age. The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane
Probab=99.10 E-value=2.3e-07 Score=85.81 Aligned_cols=367 Identities=13% Similarity=0.074 Sum_probs=185.7
Q ss_pred HHHHHHHHhhhchhchHhHHHHHHHHhcccccchh------------------hhhhhHHHHHHHHHHHHHHhhhhhhhh
Q 011783 45 SIWIIVLCTALPISSLFPFLYFMIKDFQIAKREED------------------IGSYAGYVGSSFMFGRALTSVFWGLVA 106 (477)
Q Consensus 45 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~------------------~~~~~g~~~s~~~~~~~~~~~~~G~l~ 106 (477)
..|+..+++.+.+-++..+.-++.++.+.+..+.+ ...-.+.+.-+-.+...+..+.+.+..
T Consensus 4 ~fw~~Gl~Nn~~yvv~lsaA~di~~~~~~~~~~~~~~~~~p~~~~~~~~~~~c~~~~t~~Vlladi~P~l~~Kl~aP~fi 83 (402)
T PF02487_consen 4 AFWLLGLCNNFLYVVMLSAAHDIVGEQKASPNSSHVDPDPPSTTLPSSSRRDCKSVSTGAVLLADILPSLLVKLIAPFFI 83 (402)
T ss_pred HHHHHHHhcchhHhhhHHhHHHHhhccccCCCCCCCCCCCCCCcCCCccCCCCCcccchHHHHHHHHHHHHHHHHhHhhh
Confidence 34566666777766666666666663321110000 111145677777788888999999999
Q ss_pred hhcCCchhhHHHHHHHHHHHHHHHhhhhHHHHHHHHHHhhhcccchhhH-HHHhhhhccccchhhHHHHHHHHhHHHHHH
Q 011783 107 DRYGRKPVIIMGTASVVIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLII 185 (477)
Q Consensus 107 Dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~ 185 (477)
+|+..+.=.....++..++.++.++++|.+.=+++-.+.+++.|.--.. ..+ +..+++ ...+-++.+.+.++++
T Consensus 84 ~~v~y~~Ri~~~~~l~~~g~l~va~~~~v~~~l~Gv~las~ssg~GE~tfL~l-t~~y~~----~~l~~wssGTG~aGl~ 158 (402)
T PF02487_consen 84 HRVPYWIRILICVALSAAGMLLVAFSPSVWVRLLGVVLASLSSGLGEVTFLSL-THFYGK----SSLSAWSSGTGGAGLV 158 (402)
T ss_pred hhccchHHHHHHHHHHHHHHhheeeccchhHHHHHHHHHhhhhhhhHHHHHHH-HHhcCc----cccccccCCcChhhHH
Confidence 9998766667777788889999999999998888889999988876665 554 445553 3577788888888888
Q ss_pred HHhHHHHhhhccccCCcccccccccccccchHHH-HHHHHH-hhccccccCCCCCCcc-chhhhhhhhhhccchhhcccC
Q 011783 186 GPALGGFLAQPAEKYPNLFSSESLFGKFPYFLPC-LCISLF-AFGETLHRHNDDDDSC-DVSYDALESASAEVKEEEGRE 262 (477)
Q Consensus 186 g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~-~l~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 262 (477)
|+..-..+... .+..|..+ .....++. ..+..+ .+|..+..++..+.+. +...++..+.+.+..+.+...
T Consensus 159 Ga~~y~~lT~~------g~s~~~tl-l~~~~lp~~~~~~~f~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (402)
T PF02487_consen 159 GALYYLGLTTL------GLSPRTTL-LIMLVLPAIFLLSYFFLLPSPPTNRPYQESESEDEAEDDLLESETSESKPDSSS 231 (402)
T ss_pred HHHHHHHHHHh------CcCHHHHH-HHHHHHHHHHHHHHHHhhccccccCCCcccCCCCcccccccccccccccccccc
Confidence 88776655541 11222222 11111221 112222 3332221111111110 000000000000000001111
Q ss_pred Cchhhhhh-cchhhHHHHHHHHHHHhhhh-hhHHHHHHhhcCcccCCccccchhhhHHHHHHHHHHHHHHHHHHHHHHHH
Q 011783 263 ATPKKSLL-KNWPLMSSIIVYCVFSLHDM-AYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLER 340 (477)
Q Consensus 263 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~ 340 (477)
+...++-+ +-+.+...++-.+...+..+ .-+...+...... ...-...+..+....+.++..+++- .. .
T Consensus 232 ~~~~~~k~~~~k~Ll~ymiPL~lVY~aEY~InqGv~~tl~fp~----~~~~~r~~Y~~Y~~~YQ~GVFISRS-S~----~ 302 (402)
T PF02487_consen 232 KLSFKEKLKRLKPLLWYMIPLFLVYFAEYFINQGVAPTLLFPN----SFFSPRDQYRWYQLLYQLGVFISRS-SL----P 302 (402)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHhcCCc----cCCCHHHHHHHHHHHHHHHHhhhhc-ce----e
Confidence 11222111 11222222222222222222 2223333322211 1122234455566666666555543 21 1
Q ss_pred hhcchhHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhhhhHHHHhHHHHHHhhcCCcchhhHHhHHHHHHHH
Q 011783 341 ILGPIMVARIAGVLTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIAMTGMS 420 (477)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~ 420 (477)
.+.-|++..... +..+-+..+.+.....-......+.+..+..|..++..+......+.+..|+++|.-++|.....-.
T Consensus 303 ~~rir~lwils~-LQ~~nl~~~~l~s~~~fipsi~ivf~lif~eGLlGGa~YVNtF~~I~~~~~~~~REFslg~vsvsds 381 (402)
T PF02487_consen 303 FFRIRRLWILSL-LQVINLVFLLLQSWYRFIPSIWIVFVLIFYEGLLGGASYVNTFYRISEEVPPEDREFSLGAVSVSDS 381 (402)
T ss_pred eeehhhHHHHHH-HHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHhhhHHHHHHHHHHHhcCCHHHHHHHHHHHHHHhh
Confidence 222233333322 2222222221111111111122333445556777777887777778888999999999999988888
Q ss_pred HHHHHhhhHHHHH
Q 011783 421 LFKAAGPAGGGAL 433 (477)
Q Consensus 421 ~g~~~~~~~~g~l 433 (477)
+|..++..++=.+
T Consensus 382 ~GI~lAgll~l~l 394 (402)
T PF02487_consen 382 LGILLAGLLGLPL 394 (402)
T ss_pred HHHHHHHHHHHHH
Confidence 8887777665444
No 221
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=99.10 E-value=2.5e-09 Score=97.14 Aligned_cols=154 Identities=15% Similarity=0.197 Sum_probs=125.0
Q ss_pred HHHHHHHHHHHhhhchhchHhHHHHH-HHHhcccccchhhhhhhHHHHHHHHHHHHHHhhhhhhhhhhcCCchhhHHHHH
Q 011783 42 ELFSIWIIVLCTALPISSLFPFLYFM-IKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTA 120 (477)
Q Consensus 42 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~s~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~Grr~~~~~~~~ 120 (477)
.+....++.++..=+.+.+...-..+ .+++|++..+ ..++.....+..+++++++|+|.||+|.|+++.++++
T Consensus 253 ~i~~FLiA~~~~~DGv~til~~~~~fg~~~~gls~~~------lll~g~~~~vvA~lg~ii~g~Ld~rfg~k~vl~~~lv 326 (438)
T COG2270 253 NLVLFLIARFFYIDGVNTILAMGGVFGAADLGLSSTE------LLLIGIALSVVAALGAIIAGFLDERFGSKPVLMIGLV 326 (438)
T ss_pred chHHHHHHHHHHHhhHHHHHHHHHHHHHHHcCccHHH------HHHHHHHHHHHHHHHHHHHHHHHHHhCCceeehHHHH
Confidence 34444444444333333333333444 4599999999 9999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhhhHHHHHHHHHHhhhcccchhhH-HHHhhhhccccchhhHHHHHHHHhHHHHHHHHhHHHHhhhcccc
Q 011783 121 SVVIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEK 199 (477)
Q Consensus 121 ~~~i~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~ 199 (477)
+..+..+..-+...-..+.+.-.+.|.+.|..... .++.++.+|+++-++.+|+++...-.+..+||.+-+.+.+.+.+
T Consensus 327 i~~~~~~~~~~~~~~~~f~i~gll~g~s~G~~qA~SRSy~~~lvp~~k~~~fFglyaltgra~S~~gp~lv~v~t~iTg~ 406 (438)
T COG2270 327 ILSIAALYLIFLEGELDFWILGLLVGTSLGGAQASSRSYLARLVPKGKEGRFFGLYALTGRAASFLGPFLVAVITQITGS 406 (438)
T ss_pred HHHHHHHHHHHccccHHHHHHHHHHHHhcchHHHHHHHHHHHhCCCccccceeehhhhhhhHHHHHHHHHHHHHHHHhcc
Confidence 99888887777666666677778899998888777 99999999999999999999999999999999999999986554
Q ss_pred CC
Q 011783 200 YP 201 (477)
Q Consensus 200 ~~ 201 (477)
-|
T Consensus 407 ~r 408 (438)
T COG2270 407 SR 408 (438)
T ss_pred hh
Confidence 33
No 222
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=99.06 E-value=1.7e-09 Score=118.01 Aligned_cols=143 Identities=13% Similarity=0.079 Sum_probs=119.9
Q ss_pred HHHHHHhhhchhchHhHHH-HHHHHhccccc-chhhhhhhHHHHHHHHHHHHHHhhhhhhhhhhcCCchhhHHHHHHHHH
Q 011783 47 WIIVLCTALPISSLFPFLY-FMIKDFQIAKR-EEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVI 124 (477)
Q Consensus 47 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~s~~-~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~Grr~~~~~~~~~~~i 124 (477)
.+..++...........+| .+.+++|.+.. + .|++.+...++..+++++.|+++||+++|+++.++.++.++
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~------~g~~~~~~~ig~~~g~~~~g~l~~r~~~~~~~~~~~~~~~~ 311 (1146)
T PRK08633 238 IIGLSYFWFISQLAQANFPAYAKEVLGLDNTFQ------VQYLLAASAIGIGIGSLLAGRLSGRHIELGLVPLGALGLAL 311 (1146)
T ss_pred HHHHHHHHHHHHHHHHhhHHHHHHHhCCCcHHH------HHHHHHHHHHHHHHHHHHHHHHhCCceEccchhHHHHHHHH
Confidence 3333333333344445555 55677899888 7 89999999999999999999999999999999999988888
Q ss_pred HHHHHHhhhhHHHHHHHHHHhhhcccchhhH-HHHhhhhccccchhhHHHHHHHHhHHHHHHHHhHHHHhhh
Q 011783 125 FNTLFGLSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQ 195 (477)
Q Consensus 125 ~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~ 195 (477)
+.++..+..+.+.+++..++.|++.+...+. .+++.+.+|+++|++++++.+....+|.++++.+++.+..
T Consensus 312 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~rg~~~~~~~~~~~lg~~~~~~~~~~l~~ 383 (1146)
T PRK08633 312 SLFLLPTAPSLASVLVLFFLFGFSAGLFIVPLNALIQFRAPEKELGKVLAANNFLQNVGMLLFLALTTLFSG 383 (1146)
T ss_pred HHHHHHHhhhHHHHHHHHHHHHHHHHHhhHHHHHHHhhcCCccchhhhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8888888889888889999999998887776 9999999999999999999999999999998888877654
No 223
>KOG3574 consensus Acetyl-CoA transporter [Inorganic ion transport and metabolism]
Probab=99.04 E-value=1.9e-08 Score=89.51 Aligned_cols=369 Identities=12% Similarity=0.058 Sum_probs=198.6
Q ss_pred CCchhHHHHHHHHHHHhhhchhchHhHHHHHHHHhcccccchhhhhhhHHHHHHHHHHHHHHhhhhhhhhh-----hcCC
Q 011783 37 GLPITELFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVAD-----RYGR 111 (477)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~D-----r~Gr 111 (477)
+..++.+..+.+.+.+.++..+... .+|.+.+.-|.|.++ .+...-++ .. -..-++|.++.| |+||
T Consensus 27 ~~d~~~illLl~LYllQGiP~GL~~-~iP~lL~ak~vSyt~------~a~fS~ay-~P-~sLKllWaPiVDs~y~k~~Gr 97 (510)
T KOG3574|consen 27 KGDRSSILLLLFLYLLQGIPLGLIG-AIPLLLQAKGVSYTS------QAIFSFAY-WP-FSLKLLWAPIVDSVYSKRFGR 97 (510)
T ss_pred hhhhhhHHHHHHHHHHcCCchhHhh-hhHHHhcCCCcchhh------hhhhhhhh-hH-HHHHHHHHhhhHHHHHHhhcc
Confidence 4445778888999999999999988 899999988888877 44433332 12 234578999999 9999
Q ss_pred chhhHH-HHHHHHHHHHHHHh-----------hhhHHHHHHHHHHhhhcccchhhH-HHHhhhhccccchhhHHHHHHHH
Q 011783 112 KPVIIM-GTASVVIFNTLFGL-----------SVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTA 178 (477)
Q Consensus 112 r~~~~~-~~~~~~i~~~~~~~-----------~~~~~~l~~~r~l~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~ 178 (477)
||.-++ +..+.+....+.+. .++...+...-++.-+..+..-.+ -.+.-.+..+++.|.+..-...+
T Consensus 98 rksWvvp~q~llG~~mllLs~~v~~~~g~ng~~p~v~~lt~~f~LLnflaAtQDIAVDgwALtmLs~e~lgyaST~q~Vg 177 (510)
T KOG3574|consen 98 RKSWVVPCQYLLGLFMLLLSYLVDRGLGGNGGLPNVVALTLLFLLLNFLAATQDIAVDGWALTMLSRENLGYASTCQSVG 177 (510)
T ss_pred ccceeeehHHHHHHHHHHHhhCCCcccccCCCCcchHHHHHHHHHHHHHHhhhhhhhhHHHHHhcCHhhcCchhHHHHHH
Confidence 987443 33333333333322 233344444455666666666555 67777777788887776665555
Q ss_pred hHHHHHHHHhHHHHhhh------ccccCCcccccc--cccc-cccchHHHHHHHHHhhccccccCCCCCCccchhhhhhh
Q 011783 179 WGIGLIIGPALGGFLAQ------PAEKYPNLFSSE--SLFG-KFPYFLPCLCISLFAFGETLHRHNDDDDSCDVSYDALE 249 (477)
Q Consensus 179 ~~~g~~~g~~~~~~l~~------~~~~~~~~~~~~--~~~~-~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 249 (477)
.+.|..+|..+--.+.. ...+|+.--+.- +.+. .+.... .+.-.+..++..+.+.... +|.+.
T Consensus 178 ~~~GyfL~~~ifLaL~s~dF~N~y~rs~P~~~g~ItL~gy~~fwg~~~-~vat~Lv~~~kke~~~~~~-~e~~~------ 249 (510)
T KOG3574|consen 178 QTAGYFLGNVVFLALESPDFCNTYLRSIPLDQGFITLAGYLWFWGALF-IVATTLVALLKKENDESVD-EELEL------ 249 (510)
T ss_pred HhhhHHhhcceeeEecChhhhhHHHhcCcCccceEEhhHHHHHHHHHH-HHHHHHHHHhcCCCchhhh-hhhhc------
Confidence 55555555433211111 011233111100 0000 000011 1111112222111111100 00000
Q ss_pred hhhccchhhcccCCchhhhhhcchhhHHHHHHHHHHHhhhhhhHHHHHHhhcCcccCCccccchhhhHHHHHHHHHHHHH
Q 011783 250 SASAEVKEEEGREATPKKSLLKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLV 329 (477)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~ 329 (477)
..++..+..+++++-|.+..........-..+.+-....++-+.+ .|.+..+.++...+..-..++
T Consensus 250 --------~i~~~yk~l~~vLklk~v~~la~i~lt~K~gf~a~da~t~LkLle------~Gv~ke~Lal~~v~~~plqI~ 315 (510)
T KOG3574|consen 250 --------GIHESYKLLRDVLKLKSVRWLAGILLTGKLGFQAADALTSLKLLE------HGVPKEELALIAVPLVPLQIA 315 (510)
T ss_pred --------CHHHHHHHHHHHHcCccHHHHHHHHHHHHHHhhhhhhccchHHHH------cCCChhHheeeeeehhhHHHh
Confidence 011112245667777777665555554444444444444443333 788888877666444444444
Q ss_pred HHHHHHHHHHHhhc-----chhHHHHHHHHHHHHHHHHHHHHHhhh------hhHHHHHHHHHHHHhhhhHHHHhHHHHH
Q 011783 330 FQLSLYPFLERILG-----PIMVARIAGVLTIPLLTSYPYIAMLSG------FGLAFLLNCASVVKNLLSVSIITGLFIL 398 (477)
Q Consensus 330 ~~~~~~~~l~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 398 (477)
....++.+..++.. |+...+++.......+. .+.+.... ....++.+....+.+++.-..+....+.
T Consensus 316 l~~~~gk~ta~~~pl~~~lka~~~R~~~~~~~t~Lv--~~~~~~~~~~G~~~~~~~il~i~~y~~~~~~~ts~fv~~maf 393 (510)
T KOG3574|consen 316 LPLYIGKWTAGPRPLNVFLKAVPYRLGGGLVQTALV--WWTPTLGHSDGTFPRGYYILLITSYAFHQVFVTSMFVSGMAF 393 (510)
T ss_pred hhhhheeecCCCCcchHHHHhhhHHHHHHHHHHHHH--hhhcccccCCCceeechHHHHHHHHHHhhhHHHHHHHHHHHH
Confidence 44433333332211 12222222222222111 11111111 1233444445566667777777788888
Q ss_pred HhhcCCcchhhHHhHHHHHHHHHHHHHhhhHHHHHHHHhh
Q 011783 399 QNRAVDQDQRGAANGIAMTGMSLFKAAGPAGGGALFSWAQ 438 (477)
Q Consensus 399 ~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~~ 438 (477)
.+++.||...|+.+.+.|+..++|+--=..++.++.|...
T Consensus 394 ~aqisdp~iggTymTlLNTLsnLGg~wp~tv~l~l~D~lt 433 (510)
T KOG3574|consen 394 HAQISDPAIGGTYMTLLNTLSNLGGNWPGTVALWLADGLT 433 (510)
T ss_pred HhhcCCcccCccHHHHHHHHHHhcCCcHHHHHHHhcccCc
Confidence 9999999999999999999999999888888888888653
No 224
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=99.03 E-value=2.9e-09 Score=106.90 Aligned_cols=162 Identities=12% Similarity=-0.002 Sum_probs=126.6
Q ss_pred cCCccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHHHhhh--------------
Q 011783 305 KLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTIPLLTSYPYIAMLSG-------------- 370 (477)
Q Consensus 305 ~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------- 370 (477)
.++++++++.+.|++.+.+.++..++.+ ..+++.||.+|++.+..+.++.+++.+++++.....+
T Consensus 59 iek~F~lss~~~G~i~s~~~i~~~~~~i-~v~~~~~r~~r~~~i~~g~ll~~lg~ll~alphf~~~~y~~~~~~~~~~~~ 137 (633)
T TIGR00805 59 IERRFKLSTSSSGLINGSYEIGNLLLII-FVSYFGTKLHRPIVIGIGCAIMGLGSFLLSLPHFLSGRYSYSTTVSSTGNL 137 (633)
T ss_pred hhhhhCCCCCcceeeeehhhHHHHHHHH-HHHHhhcccCcceEEEecHHHHHHHHHHHhChHHhcCCccccccccccccc
Confidence 5567999999999999999999999988 8899999999999999999999888877665431100
Q ss_pred -------------------------------hhHHHHHHHHHHHHhhhhHHHHhHHHHHHhhcCCcchhhHHhHHHHHHH
Q 011783 371 -------------------------------FGLAFLLNCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIAMTGM 419 (477)
Q Consensus 371 -------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~ 419 (477)
...+..+++.-++.|++.+..++...+++.|.+|+++|+...|+.+...
T Consensus 138 ~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~GiG~~~~~~~~~~~i~d~~~~~~~~~~~~i~~~~~ 217 (633)
T TIGR00805 138 SSANSFLCMENLTQALRPTQCPSECQKQHKESLMWLLFLVSQLLRGIGATPIFPLGISYIDDFAKSKNSPLYIGILESIA 217 (633)
T ss_pred cccccccccCCCCCCccccccccccccccCCCceehhhHHHHHHHhccCCcchhcCchhhhccCCccccHHHHHHHHHHH
Confidence 1134455667778888889999999999999999999999999999999
Q ss_pred HHHHHHhhhHHHHHHHHhhhhc-----------cccC-CCCchHHHHHHHHHHHHHHHHH
Q 011783 420 SLFKAAGPAGGGALFSWAQKRL-----------DASF-LPGSQMVFFVLNVVEAIGVLMT 467 (477)
Q Consensus 420 ~~g~~~~~~~~g~l~~~~~~~~-----------~~~~-~~g~~~~~~~~~~~~~~~~~~~ 467 (477)
.+|..+|+.++|.+.+...+.. ..+. .++|+..|++.+++.++..+..
T Consensus 218 ~iG~~lG~llgg~l~~~~~d~~~~~~~~~~l~~~dprWiGaWwl~Fli~g~l~~l~~v~l 277 (633)
T TIGR00805 218 VFGPAFGYLLGSFCLQIYVDTGSVNTEDVILTPTDPRWIGAWWIGFLICGGVALLTSIPF 277 (633)
T ss_pred HhhhHHHHHHHHHHHhcccccccCCCCCCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999987653211 0011 1136777888877776655443
No 225
>KOG4332 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=99.02 E-value=2.7e-08 Score=84.32 Aligned_cols=370 Identities=10% Similarity=0.019 Sum_probs=193.5
Q ss_pred HHHhhhchhchHhHHHHHHHHhcccccchhhhhhhHHHHHHHHHHHHHHhhhhhhhhhhcCCchhhHHHHHHHHHHHHHH
Q 011783 50 VLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLF 129 (477)
Q Consensus 50 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~Grr~~~~~~~~~~~i~~~~~ 129 (477)
.++...+...-.|.+-++-++++....+ +|.+.-+.+-...+...+.|-++||-|||+.-+.-++.+.++++ .
T Consensus 46 yslmmAgDWLQgPYvYyLYstYgFgkG~------IgqLfiaGfgSsmLFGtivgSLaDkqGRKracvtycitYiLsCi-T 118 (454)
T KOG4332|consen 46 YSLMMAGDWLQGPYVYYLYSTYGFGKGD------IGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCITYILSCI-T 118 (454)
T ss_pred HHHHHhhhhhcCceeeeeehhcCccCCc------cceeeecccchHHHHHHHHHHHHhhhccccceeeehHHHHHHHH-h
Confidence 3344445566678777888899999999 99988888888899999999999999999975544444443322 2
Q ss_pred HhhhhHHHHHHHHHHhhhcccchhhH--HHHhhhhccccchhhHHHHHHHH----hHHHHHHHHhHHHHhhhccccCCcc
Q 011783 130 GLSVNFWMAVLTRFLLGSLNGLLGPI--KAYACEIFREEHQALGLSTVSTA----WGIGLIIGPALGGFLAQPAEKYPNL 203 (477)
Q Consensus 130 ~~~~~~~~l~~~r~l~G~~~g~~~~~--~~~i~~~~~~~~r~~~~~~~~~~----~~~g~~~g~~~~~~l~~~~~~~~~~ 203 (477)
-.++.|-.++++|.+-|+..+....+ .=++.|..+ +|+.-.-+.... ..+|.-+-.+++|...+...+|- .
T Consensus 119 KhSpqYkVLmVGR~LGGiaTsLLFSaFEsWliaEHne--kr~FeqqWls~TFskA~ffgNglvAiiaGlfgn~lvd~~-s 195 (454)
T KOG4332|consen 119 KHSPQYKVLMVGRVLGGIATSLLFSAFESWLIAEHNE--KRGFEQQWLSVTFSKAVFFGNGLVAIIAGLFGNLLVDTF-S 195 (454)
T ss_pred hcCCceEEEeehhhhhhHHHHHHHHHHHHHHHHHhhh--ccCChHhhhhHHHHHHHHhhccHHHHHHHHHHHHHHHHh-c
Confidence 34688999999999999998886665 446777653 333322222221 22333333334443333211121 1
Q ss_pred cccccccccccchHHHHHHHHHhhccccccCCC--CCCccchhhhhhhhhhccchhhcccCCchhhhhhcchhhHHHHHH
Q 011783 204 FSSESLFGKFPYFLPCLCISLFAFGETLHRHND--DDDSCDVSYDALESASAEVKEEEGREATPKKSLLKNWPLMSSIIV 281 (477)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 281 (477)
+|--+.| -.+...+.+-.......|.+. ++.+.+.. ..+.+...+.+..++++..+-..
T Consensus 196 lGPVAPF-----dAAacfLaigmAvil~~W~ENygdps~~kdl--------------ltqf~gaa~aiaSD~ki~LLG~i 256 (454)
T KOG4332|consen 196 LGPVAPF-----DAAACFLAIGMAVILSSWSENYGDPSENKDL--------------LTQFKGAARAIASDEKIALLGAI 256 (454)
T ss_pred cCCCCch-----HHHHHHHHHHHHHHHhhhhhccCChhhhHHH--------------HHHhhHhHHHHhcchHHHHHHHH
Confidence 2322223 222222111111100111111 11111111 12223345566677776665555
Q ss_pred HHHHHhhhhhhHHHHHHhhcCcccCCccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHhhc--chhHHHHHHHHHHHHH
Q 011783 282 YCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILG--PIMVARIAGVLTIPLL 359 (477)
Q Consensus 282 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~--~~~~~~~~~~~~~~~~ 359 (477)
..++-...+.+ .++.+|.... +-...--|.+++.+.+..++++- +..++..|-. ......+.+++....+
T Consensus 257 qsLFE~smytF-----VFLWTPaLsp--n~e~iPhGfiFatFMlASmLGSS-la~Rl~s~s~~~ve~ymqivf~vs~a~l 328 (454)
T KOG4332|consen 257 QSLFEGSMYTF-----VFLWTPALSP--NDEEIPHGFIFATFMLASMLGSS-LASRLLSRSSPKVESYMQIVFLVSIAAL 328 (454)
T ss_pred HHHHhhhhhee-----eeeecccCCC--CcccCCchhHHHHHHHHHHHhhH-HHHHHHhcCCcccchHHHHHHHHHHHHH
Confidence 55443322222 1222231110 01112257888888888888887 5545544433 2344445554444443
Q ss_pred HHHHHHHHh-hhhhHHHHHHHHHHHHhhhhHHHHhHHHHHHhhcCCcchhhHHhHHHHHHHHHHHHHhhhHHHHHHHHhh
Q 011783 360 TSYPYIAML-SGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIAMTGMSLFKAAGPAGGGALFSWAQ 438 (477)
Q Consensus 360 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~~ 438 (477)
.+....... ++......-.+.+.+.-.+.+..+|...-+-.+..|++.|++.+-.+..--++-.-++ ++....
T Consensus 329 ~Lpilt~~vsP~kes~~~s~i~F~~~E~cvGlfwPSimkmRsqyIPEearstimNfFRvPLnifvClv------Lynlh~ 402 (454)
T KOG4332|consen 329 LLPILTSSVSPSKESPSESLIGFCLFEACVGLFWPSIMKMRSQYIPEEARSTIMNFFRVPLNIFVCLV------LYNLHV 402 (454)
T ss_pred HHHHHHhccCCCcCCchHHHHHHHHHHHHHhhcchHHHHHHHhhCCHHHHhhhhhheechhhHhhhhh------heeccc
Confidence 333222211 1111111223333444566788899999999999999999887665543323222221 222111
Q ss_pred hhccccCCCCchHHHHHHHHHHHHHHHH
Q 011783 439 KRLDASFLPGSQMVFFVLNVVEAIGVLM 466 (477)
Q Consensus 439 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 466 (477)
+.. ..+-+..|-++.+...++.+.
T Consensus 403 ~~~----p~~tr~mf~icS~~~~~a~i~ 426 (454)
T KOG4332|consen 403 DAF----PTTTRNMFGICSAFLFVASIL 426 (454)
T ss_pred ccC----ccccchhhhhhHHHHHHHHHH
Confidence 110 014456777776666666444
No 226
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=99.00 E-value=3.1e-08 Score=94.96 Aligned_cols=164 Identities=13% Similarity=0.026 Sum_probs=114.4
Q ss_pred cccchhhhHHHHHHHHHHHHHHHHHHHHHHHH----hhcchhHHHHH-HHHHHHHHHHHHHHHHhh-----------hhh
Q 011783 309 LNYSTQMVGEVLAITGFSLLVFQLSLYPFLER----ILGPIMVARIA-GVLTIPLLTSYPYIAMLS-----------GFG 372 (477)
Q Consensus 309 ~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~----~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~-----------~~~ 372 (477)
+|.+....+.+.....+...+.++ +.|+++| |+|||+....+ .....+++.++++..... ...
T Consensus 34 lg~~~~~~~~i~~~~~l~~~i~~P-i~G~lSDr~~sr~GRRrp~il~g~~~~~~~l~ll~~~~~~~~~~~~~~~~~~~~~ 112 (477)
T TIGR01301 34 LGIPHAWASIIWLCGPLSGLLVQP-LVGYLSDRCTSRFGRRRPFIAAGAALVAFAVILIGFAADIGHLFGDNLDKKTKPR 112 (477)
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHh-HeeehhcCCCCCCCChHHHHHHHHHHHHHHHHHHHhCchhhhhccccccccchhH
Confidence 789999999999999999999999 8899999 59999988775 444445555554433211 001
Q ss_pred HHHHHHHHHHHHhhhhHHHHhHHHHHHhhcCCcchh--hHHhHHHHHHHHHHHHHhhhHHHHH--HHHhhh---hccccC
Q 011783 373 LAFLLNCASVVKNLLSVSIITGLFILQNRAVDQDQR--GAANGIAMTGMSLFKAAGPAGGGAL--FSWAQK---RLDASF 445 (477)
Q Consensus 373 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--g~~~g~~~~~~~~g~~~~~~~~g~l--~~~~~~---~~~~~~ 445 (477)
..........+..+......+...+++.|.+|+++| +.+.++.+....+|+.+|+.+++.. .+.... ......
T Consensus 113 ~i~~~~i~~~lld~~~n~~~~p~rALiaDl~p~~~~~~~~a~~~~~~~~~lG~ilg~~~g~~~~~~~~~~~~~~~~~~~~ 192 (477)
T TIGR01301 113 AIIVFVVGFWILDVANNMLQGPCRAFLADLTGGDARRTRIANAYFSFFMAIGNVLGYAAGAYSGLYKIFPFTKTEACGVS 192 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcccccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHhcccccccccccc
Confidence 112223333334566677778889999999998865 6899999999999999999998875 222111 000111
Q ss_pred CCCchHHHHHHHHHHHHHHHHHhhhhhhc
Q 011783 446 LPGSQMVFFVLNVVEAIGVLMTFKPFLAQ 474 (477)
Q Consensus 446 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 474 (477)
..+++..|++.+++.+++.++..+ ..||
T Consensus 193 ~~~~~~~F~i~a~~l~i~~l~t~~-~v~E 220 (477)
T TIGR01301 193 CANLKSCFLIDIILLAILTYIALS-AVKE 220 (477)
T ss_pred cchHHHHHHHHHHHHHHHHHHHee-eeec
Confidence 126788999998888888887766 3444
No 227
>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=98.99 E-value=6.9e-09 Score=88.63 Aligned_cols=149 Identities=18% Similarity=0.233 Sum_probs=110.9
Q ss_pred HHHHHHHHHHhhhchhchHhHHH-HHHHHhcccccchhhhhhhHHHHHHHHHHHHHHhhhhhhhhhhcCCchhhHHHHHH
Q 011783 43 LFSIWIIVLCTALPISSLFPFLY-FMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTAS 121 (477)
Q Consensus 43 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~s~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~Grr~~~~~~~~~ 121 (477)
++++...+++.+....-+..+-| .+++.||.|+.+ .+.+.+....-.++.+++.|.++||+|++...+.+..+
T Consensus 266 fw~~~iicv~yyva~fPFi~lg~~fF~~rfGlS~~~------a~~i~s~vy~Isav~spvfg~i~Dk~G~n~~wv~~a~~ 339 (459)
T KOG4686|consen 266 FWVLVIICVLYYVAWFPFITLGPMFFQKRFGLSAVS------AGNILSTVYGISAVLSPVFGAISDKYGFNLWWVASACI 339 (459)
T ss_pred HHHHHHHHHHHHHHHHHHhhhhHHHHHHhhCCChhh------ccchhhhhhhhhhhhhhhHHHhHhhhcceehhHHHHHH
Confidence 34444444444433332333334 678999999999 88888888888899999999999999999887766544
Q ss_pred HHH-HHHHHHhhhhHHHHHHHHHHhhhcccchhhH-HHHhhhhccccchhhHHHHHHHHhHHHHHHHHhHHHHhhhcccc
Q 011783 122 VVI-FNTLFGLSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEK 199 (477)
Q Consensus 122 ~~i-~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~ 199 (477)
..+ +-....+ +++.=.++..+.|+........ ...++...|+++.|++.|..+...++|..+-|+++|.+.+...+
T Consensus 340 ~tl~~H~~l~F--t~lsPy~~m~~lGLsysllAcslWP~va~~vpE~qLGTaygf~qsIqNLgla~i~Iiag~i~d~~g~ 417 (459)
T KOG4686|consen 340 LTLLGHSGLFF--TFLSPYTSMTFLGLSYSLLACSLWPCVASLVPEEQLGTAYGFIQSIQNLGLAFIPIIAGFIADGDGS 417 (459)
T ss_pred HHHHHhhhHHh--hhccHHHHHHHHhhhHHHHHHHHhhhhhhhCCHHHhcchHHHHHHHHhhhhhHHhhhhheeecCCCc
Confidence 433 3333333 2233355667888888877776 88889999999999999999999999999999999999985544
No 228
>PTZ00207 hypothetical protein; Provisional
Probab=98.99 E-value=1.1e-07 Score=93.27 Aligned_cols=148 Identities=17% Similarity=0.081 Sum_probs=100.6
Q ss_pred CccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhh
Q 011783 307 GGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNL 386 (477)
Q Consensus 307 ~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 386 (477)
+++|++..+.+.+...... ....++ ..|++.||+|+|+++.++.++..++.++..+............+.+...+.+.
T Consensus 55 ~~lgls~~~l~~i~svg~~-~g~~~l-p~G~L~Dr~G~R~vllig~ll~~iG~ll~ala~~~~i~~s~~~l~l~r~l~G~ 132 (591)
T PTZ00207 55 ARYNLTQRDLSTITTVGIA-VGYFLL-PYSFIYDYLGPRPIFVLSMTVFCLGTLLFALTFQEVIEGSVVRLSVYNGLMTL 132 (591)
T ss_pred HHhCcCHHHHHHHHHHHHH-HHHHHH-HHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHhcccccCcHHHHHHHHHHHHH
Confidence 4489999999988776333 334455 67999999999999999999999998877765221100112233333444556
Q ss_pred hhHHHHhHHHHHHhhcCCcchhhHHhHHHHHHHHHHHHHhhhHHHHHHHHhhhhccccCCCCchHHHHHHHHHHHHHHHH
Q 011783 387 LSVSIITGLFILQNRAVDQDQRGAANGIAMTGMSLFKAAGPAGGGALFSWAQKRLDASFLPGSQMVFFVLNVVEAIGVLM 466 (477)
Q Consensus 387 ~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 466 (477)
+.+...+.....+.+.+| ++||++.|+......+|+++.+.+...++.. +++..|++.+++.++..++
T Consensus 133 G~~~~~~~~~~~i~~~Fp-~~RG~a~Gi~~~~~gLGsaI~~~l~~~l~~~-----------~~~~~fl~l~vl~~vv~ll 200 (591)
T PTZ00207 133 GCMLFDLGAVVTVLSVFP-SNRGAVVAIMKTFTGLGSAILGSIQLAFFSD-----------NTSAYFFFLMSFALVVGIL 200 (591)
T ss_pred HHHHHHHHHHHHHHHhCh-hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----------hHHHHHHHHHHHHHHHHHH
Confidence 666666777777788887 7899999999999999998655554444431 3455666666666555444
Q ss_pred Hh
Q 011783 467 TF 468 (477)
Q Consensus 467 ~~ 468 (477)
..
T Consensus 201 ~~ 202 (591)
T PTZ00207 201 AI 202 (591)
T ss_pred HH
Confidence 43
No 229
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=98.98 E-value=2.3e-07 Score=92.67 Aligned_cols=131 Identities=16% Similarity=0.195 Sum_probs=106.8
Q ss_pred chHhHHHHHHHHhcccccchhhhhhhHHHHHHHHHHHHHHhhhhhhhhhh-cCCchhhHHHHHHHHHHHHHHHhhh----
Q 011783 59 SLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADR-YGRKPVIIMGTASVVIFNTLFGLSV---- 133 (477)
Q Consensus 59 ~~~~~~~~~~~~~~~s~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~Dr-~Grr~~~~~~~~~~~i~~~~~~~~~---- 133 (477)
+...+..++.+.+|.+.++ ...+...+....-+..+++|+++|+ +||++.+.++.++..++.++.+++.
T Consensus 6 m~aiLvlYl~~~lg~~~~~------A~~i~~~f~~l~yl~pilGg~iAD~~lG~~~tIl~~~ii~~lG~~llai~a~~~~ 79 (654)
T TIGR00926 6 MRTILVLYFLNFLGFSEST------STVLFHTFTYLCYLTPLIGAIIADGWLGKFKTILYLSIVYVVGHALLSFGAIPSS 79 (654)
T ss_pred cHHHHHHHHHHHcCCcHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhccCccc
Confidence 3445556777888998888 7788888888888899999999997 5999999999999999988877642
Q ss_pred ----hHHHHHHHHHHhhhcccchhhH-HHHhhhhcccc---chhhHHHHHHHHhHHHHHHHHhHHHHhhh
Q 011783 134 ----NFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREE---HQALGLSTVSTAWGIGLIIGPALGGFLAQ 195 (477)
Q Consensus 134 ----~~~~l~~~r~l~G~~~g~~~~~-~~~i~~~~~~~---~r~~~~~~~~~~~~~g~~~g~~~~~~l~~ 195 (477)
.....+++-.+..+|.|..-|+ .+...|.++++ +|-..+.++..+.++|..+++.+.+++.+
T Consensus 80 ~~~~~~~~~l~gLaLia~G~GgiKp~vsaf~gdqf~~~~~~~~~s~F~~fY~~iNiGSlis~~i~~~l~~ 149 (654)
T TIGR00926 80 GHPLHDLLDLLGLALIALGTGGIKPCVSAFGGDQFEERQLSLRSRFFSFFYFAINAGSLISTIITPILRG 149 (654)
T ss_pred ccchHHHHHHHHHHHHHhhccccccCchhhhHhhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 1233556667777889999898 99999999754 47788889999999999999999988875
No 230
>PRK10429 melibiose:sodium symporter; Provisional
Probab=98.98 E-value=2.5e-09 Score=104.56 Aligned_cols=149 Identities=11% Similarity=0.047 Sum_probs=111.9
Q ss_pred hHHHHHHHHHHHhhhchhchHhHHHHHHHHhcccccchhhhhhhHHHHHHHHHHHHHHhhhhhhhhhhcCCchhhHHHHH
Q 011783 41 TELFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTA 120 (477)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~Grr~~~~~~~~ 120 (477)
+.+..+....++............+++.++...+.+. .+++.+...++..++.+++++++||+|+|+.+.++.+
T Consensus 231 ~~~~~ll~~~~~~~~~~~~~~~~~~y~~~y~~~~~~~------~~~~~~~~~i~~ii~~~~~~~l~~r~gkk~~~~~~~~ 304 (473)
T PRK10429 231 DQLSCLLGMALAYNIASNIINGFAIYYFTYVIGDADL------FPYYLSYAGAANLVTLILFPRLVKSLSRRILWAGASI 304 (473)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhheeeEEEEECCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHH
Confidence 4455555556655566566655556555554334444 6777777778899999999999999999999998888
Q ss_pred HHHHHHHHHHh-----hhhHHHHHHHHHHhhhcccchhhH-HHHhhhhcc-------ccchhhHHHHHHHHhHHHHHHHH
Q 011783 121 SVVIFNTLFGL-----SVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFR-------EEHQALGLSTVSTAWGIGLIIGP 187 (477)
Q Consensus 121 ~~~i~~~~~~~-----~~~~~~l~~~r~l~G~~~g~~~~~-~~~i~~~~~-------~~~r~~~~~~~~~~~~~g~~~g~ 187 (477)
+..++.+.... .++.+.+++.-++.|++.+...+. .++++|..+ +++.|..++......-+|..+++
T Consensus 305 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~g~~~~~~~~~~~am~ad~id~~e~~tG~R~~G~~~s~~~~~~K~~~al~~ 384 (473)
T PRK10429 305 FPVLSCGVLLLMGLAAPHNALLIVIAGILLNIGTALFWVLQVIMVADTVDYGEYKLGIRCESIAYSVQTMVVKGGSAFAA 384 (473)
T ss_pred HHHHHHHHHHHHhccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhHhcCccchhHHHHHHHHHHHHHHHHHH
Confidence 77766555432 345677777778889988887776 999999966 33456688999999999999999
Q ss_pred hHHHHhhh
Q 011783 188 ALGGFLAQ 195 (477)
Q Consensus 188 ~~~~~l~~ 195 (477)
.+.|++.+
T Consensus 385 ~i~g~~l~ 392 (473)
T PRK10429 385 FFIGVVLG 392 (473)
T ss_pred HHHHHHHH
Confidence 99999876
No 231
>PRK09848 glucuronide transporter; Provisional
Probab=98.96 E-value=2.7e-09 Score=103.87 Aligned_cols=149 Identities=16% Similarity=0.142 Sum_probs=112.2
Q ss_pred hHHHHHHHHHHHhhhchhchHhHHHHHHH-HhcccccchhhhhhhHHHHHHHHHHHHHHhhhhhhhhhhcCCchhhHHHH
Q 011783 41 TELFSIWIIVLCTALPISSLFPFLYFMIK-DFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGT 119 (477)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~s~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~Grr~~~~~~~ 119 (477)
+.+....+..++............|.+.+ .+|.++.. .++......++..++.++++++.||+|+|+++.++.
T Consensus 228 ~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~------~~~~~~~~~~~~~~~~~l~~~l~~r~g~~~~~~~g~ 301 (448)
T PRK09848 228 RPLFMLCIGALCVLISTFAVSASSLFYVRYVLNDTGLF------TVLVLVQNLVGTVASAPLVPGMVARIGKKNTFLIGA 301 (448)
T ss_pred chHHHHHHHHHHHHHHHHHHhhhheeeEeeecCChHHH------HHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHH
Confidence 33444445555555554555555564443 46655544 445455556778889999999999999999999999
Q ss_pred HHHHHHHHHHHhhh--hHHHHHHHHHHhhhcccchhhH-HHHhhhhcccc-------chhhHHHHHHHHhHHHHHHHHhH
Q 011783 120 ASVVIFNTLFGLSV--NFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREE-------HQALGLSTVSTAWGIGLIIGPAL 189 (477)
Q Consensus 120 ~~~~i~~~~~~~~~--~~~~l~~~r~l~G~~~g~~~~~-~~~i~~~~~~~-------~r~~~~~~~~~~~~~g~~~g~~~ 189 (477)
++..++.++..+.+ +++.+++..++.|+|.+...+. .++.+|..|.+ ++|...+..+....+|..+|+.+
T Consensus 302 ~~~~i~~~~~~~~~~~~~~~~~~~~~l~g~G~~~~~~~~~al~~~~~~~~~~~~g~r~~G~~~~~~~~~~klg~aig~~i 381 (448)
T PRK09848 302 LLGTCGYLLFFWVSVWSLPVALVALAIASIGQGVTMTVMWALEADTVEYGEYLTGVRIEGLTYSLFSFTRKCGQAIGGSI 381 (448)
T ss_pred HHHHHHHHHHHHcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHhhCccchhHHHHHHHHHHHHHHHHHHHH
Confidence 88888877776643 6777777788899998887777 88999988754 35899999999999999999999
Q ss_pred HHHhhh
Q 011783 190 GGFLAQ 195 (477)
Q Consensus 190 ~~~l~~ 195 (477)
.+.+.+
T Consensus 382 ~g~~l~ 387 (448)
T PRK09848 382 PAFILG 387 (448)
T ss_pred HHHHHH
Confidence 998876
No 232
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=98.94 E-value=4.8e-08 Score=90.82 Aligned_cols=177 Identities=16% Similarity=0.145 Sum_probs=117.0
Q ss_pred hcchhhHHHHHHHHHHHhhhhhhHHHHHHhhcCcccCCccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHH
Q 011783 270 LKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVAR 349 (477)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 349 (477)
.||++++.....++++++....+.++++.|+.+. .|++..++|.+++...+..++.++ +.|.+.||.+.|+-+.
T Consensus 4 ~~~~~~~~~s~~~f~~Ff~~gi~~pF~~iWL~~~-----~GLs~~~iG~i~s~~~~~~l~~qp-~~G~i~Dklg~kK~Ll 77 (412)
T PF01306_consen 4 FKNKNYWWLSLFYFFYFFIWGIFLPFFPIWLTQV-----AGLSGTEIGIIFSAGSLFALLAQP-VYGFISDKLGLKKHLL 77 (412)
T ss_dssp CHSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----H---HHHHHHHHHHHHHHHHHTHH-HHHHHHHHCTTCSHHH
T ss_pred ccCchHHHHHHHHHHHHHHHHHHHHHHHHHHccc-----cCCCHHHHHHHHHHHHHHHHHHHH-hHHHhcchhhhhHHHH
Confidence 4678899999999999999999999999999864 799999999999999999999999 8899999999665544
Q ss_pred HHHHHHHH--H-HHHHHHHHHhhhhhHHHHHHHHHHHHhhhhHHHHhHHHHHHhhcCCcchhhHHhHHHHHHHHHHHHHh
Q 011783 350 IAGVLTIP--L-LTSYPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIAMTGMSLFKAAG 426 (477)
Q Consensus 350 ~~~~~~~~--~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~ 426 (477)
.......+ + ...+.+.+... ...+...++..+..++......|..-++..+. .++.+--.|=..+.+++|.+++
T Consensus 78 ~~i~~l~~l~~pff~~v~~pll~-~n~~lg~iig~i~l~~~f~~~~~~~Ea~~er~--sr~~~feYG~~R~wGSig~ai~ 154 (412)
T PF01306_consen 78 WFIAILLLLFGPFFIYVFGPLLQ-SNFWLGAIIGGIYLGLVFNAGVPLSEAYAERV--SRRNGFEYGRARMWGSIGFAIA 154 (412)
T ss_dssp HHHHHHHHTCHHHHHHTHHHHHH-TT-HHHHHHTTTTTTTTTTTHHHHHHHHHHHH--HHHHSS-HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHcccchHHHHHHHHH--HHHhcCCcchHHHHhhHHHHHH
Confidence 33322221 1 12222222211 11222333333333445555666666665553 2445556777888999999999
Q ss_pred hhHHHHHHHHhhhhccccCCCCchHHHHHHHHHHHHHHHH
Q 011783 427 PAGGGALFSWAQKRLDASFLPGSQMVFFVLNVVEAIGVLM 466 (477)
Q Consensus 427 ~~~~g~l~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 466 (477)
..++|.+++.. .+..|++..+..++..++
T Consensus 155 s~~~G~L~~i~-----------p~~~fwi~s~~~~il~ll 183 (412)
T PF01306_consen 155 SLLAGILFNIN-----------PNIIFWIASAAAIILLLL 183 (412)
T ss_dssp HHHHHHHHHHH-----------HHHHHHHHHHHHHHHHHH
T ss_pred HHHhheeeeeC-----------ccHHHHHHHHHHHHHHHH
Confidence 99999999864 345666655544444433
No 233
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=98.94 E-value=1.4e-08 Score=94.60 Aligned_cols=182 Identities=13% Similarity=0.056 Sum_probs=141.2
Q ss_pred chhhHHHHHHHHHHHhhhhhhHHHHHHhhcCcccCCccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHhh-cchhHHHH
Q 011783 272 NWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERIL-GPIMVARI 350 (477)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~ 350 (477)
.|.++.+...-+.--+.+++....+..|++...... +|++.+++.-+++.++.-.-+... ++||++||+ |+|+.+.+
T Consensus 20 Pr~l~~if~vE~WERFsyYGmraiL~~Yl~~~~~~g-Lg~~~~~A~~l~~~y~slVY~t~i-~GG~laDr~LG~~~tI~l 97 (498)
T COG3104 20 PRGLYLIFFVELWERFSYYGMRAILILYLYYQLGDG-LGFDETHATGLFSAYGSLVYLTPI-IGGWLADRVLGTRRTIVL 97 (498)
T ss_pred CchHHHHHHHHHHHHHhhhhhHHHHHHHHHHhcccc-CCcChHhhHHHHHHHHHHHHHHHH-HHHHHHHHhcchhHHHHH
Confidence 455667777777778888888889998888764433 779999888777777666666655 899999995 89999999
Q ss_pred HHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhhhhHHHHhHHHHHHhhcCCcc--hhhHHhHHHHHHHHHHHHHhhh
Q 011783 351 AGVLTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVDQD--QRGAANGIAMTGMSLFKAAGPA 428 (477)
Q Consensus 351 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~g~~~g~~~~~~~~g~~~~~~ 428 (477)
+.++..++.+.+...... + ...+.+...+...+.+..=+...+++.+.+|++ +|-..+++..+..++|+.++|.
T Consensus 98 Gail~~iGh~~L~~~~~~-~---~~gl~i~L~~I~iG~Gl~K~NiS~llg~ly~~~DprrD~gFt~fY~~iNiGsl~~p~ 173 (498)
T COG3104 98 GAILMAIGHLVLAISSVS-G---PGGLYIGLALIIVGTGLFKPNISSLLGELYPKDDPRRDGGFTLFYMGINIGSLIAPI 173 (498)
T ss_pred HHHHHHHHHHHHhccccc-c---ccHHHHHHHHHHhccccccccHHHHHHHhcCCCCcccCCCccEEEEEeehHHHHHHH
Confidence 999999998888776410 1 112333334444677777788888999988754 3666777778888999999999
Q ss_pred HHHHHHHHhhhhccccCCCCchHHHHHHHHHHHHHHHHHhh
Q 011783 429 GGGALFSWAQKRLDASFLPGSQMVFFVLNVVEAIGVLMTFK 469 (477)
Q Consensus 429 ~~g~l~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 469 (477)
+.+++.++. ||+..|...++-..++.+..+.
T Consensus 174 i~~~~~~~~----------g~~~gF~~aavGm~~gl~~f~~ 204 (498)
T COG3104 174 ITGLLAINY----------GWHVGFGLAAVGMIIGLVIFLL 204 (498)
T ss_pred HHHHHHHhh----------CHHHHHHHHHHHHHHHHHHHHH
Confidence 999999998 9999999999998888887765
No 234
>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=98.92 E-value=3.2e-08 Score=88.45 Aligned_cols=119 Identities=13% Similarity=0.016 Sum_probs=97.2
Q ss_pred cccchhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhhhh
Q 011783 309 LNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNLLS 388 (477)
Q Consensus 309 ~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 388 (477)
.+-+....|++-+.+.+...+.++ ..|.++||+|||+++.++.+...+..++.+...+.. .+...=++ +...
T Consensus 63 ~~~~~~yaGflGSsF~ilQ~~sS~-~~G~~SD~yGRkpvll~c~~~va~s~ll~~~S~~F~------afv~aR~l-~Gi~ 134 (451)
T KOG2615|consen 63 DGASVFYAGFLGSSFSILQFISSP-LWGCLSDRYGRKPVLLACLIGVALSYLLWALSRNFA------AFVLARFL-GGIF 134 (451)
T ss_pred ccccchhhhhHhhHHHHHHHHhhh-hhhhhhhhhCchHHHHHHHHHHHHHHHHHHHHHHHH------HHHHHHHh-hhhc
Confidence 345667789999999999999999 899999999999999999999888877777766521 12221222 2334
Q ss_pred HHHHhHHHHHHhhcCCcchhhHHhHHHHHHHHHHHHHhhhHHHHHHH
Q 011783 389 VSIITGLFILQNRAVDQDQRGAANGIAMTGMSLFKAAGPAGGGALFS 435 (477)
Q Consensus 389 ~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~ 435 (477)
.+......++++|++++|+|+.+++.++....+|.++||.++|++..
T Consensus 135 kgnl~v~rAiisdV~sek~r~l~ms~v~~a~~lGfilGPmIGgyla~ 181 (451)
T KOG2615|consen 135 KGNLSVIRAIISDVVSEKYRPLGMSLVGTAFGLGFILGPMIGGYLAQ 181 (451)
T ss_pred cCchHHHHHHHHhhcChhhccceeeeeehhhhcchhhcchhhhHHHh
Confidence 55667778999999999999999999999999999999999999987
No 235
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=98.91 E-value=4.5e-08 Score=93.82 Aligned_cols=148 Identities=18% Similarity=0.208 Sum_probs=130.6
Q ss_pred CccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhh
Q 011783 307 GGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNL 386 (477)
Q Consensus 307 ~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 386 (477)
.++++++.+-+++++....+.+++++ -++++.||+|.|+++..+.++..+.-++.++....... .+++.=++.|+
T Consensus 66 ~~~~ws~~~k~~i~ss~~~G~i~~~i-P~g~l~~k~G~r~v~~~~~~~sa~~t~l~P~aa~~~~~----~~~~~R~lqGl 140 (466)
T KOG2532|consen 66 GEYDWSSTEKGLIFSSFFWGYILGQI-PGGYLADKFGARRVFFISGLISALLTLLTPLAASIGFY----LLLVLRFLQGL 140 (466)
T ss_pred ceecCCHHHHHHHHHHHHHHHHHHHc-CcHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHHhcch----hhHHHHHHhHH
Confidence 35899999999999999999999998 88999999999999999999999988888887664322 44555666788
Q ss_pred hhHHHHhHHHHHHhhcCCcchhhHHhHHHHHHHHHHHHHhhhHHHHHHHH-hhhhccccCCCCchHHHHHHHHHHHHHHH
Q 011783 387 LSVSIITGLFILQNRAVDQDQRGAANGIAMTGMSLFKAAGPAGGGALFSW-AQKRLDASFLPGSQMVFFVLNVVEAIGVL 465 (477)
Q Consensus 387 ~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~-~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 465 (477)
+.+..+|....+..+-.|+++|++..++.....++|.+++-.++|.+-+. . ||+.+|++.+++.++-.+
T Consensus 141 ~~g~~~pa~~~i~~~W~P~~Ers~~~ail~~g~q~g~v~~mp~sg~lc~s~~----------GW~sifY~~g~~g~i~~~ 210 (466)
T KOG2532|consen 141 GQGVLFPAIGSILAKWAPPNERSTFIAILTAGSQLGTIITMPVSGLLCESSL----------GWPSIFYVFGIVGLIWFI 210 (466)
T ss_pred HHhHHHhhhhceeeeECCHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhccCC----------CCchHHHHHHHHHHHHHH
Confidence 88999999999999999999999999999999999999999999999988 5 999999999998888777
Q ss_pred HHhh
Q 011783 466 MTFK 469 (477)
Q Consensus 466 ~~~~ 469 (477)
+.+.
T Consensus 211 ~w~~ 214 (466)
T KOG2532|consen 211 LWFL 214 (466)
T ss_pred HHHH
Confidence 6554
No 236
>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only]
Probab=98.91 E-value=3.5e-09 Score=93.88 Aligned_cols=95 Identities=21% Similarity=0.311 Sum_probs=78.1
Q ss_pred HHHHHHhhhhhhhhhhcCCchhhHHHHHHHHHHHHHHHhhhh--H--HHHHHHHHHhhhcccchhhHHHHhhhhccccch
Q 011783 93 FGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLSVN--F--WMAVLTRFLLGSLNGLLGPIKAYACEIFREEHQ 168 (477)
Q Consensus 93 ~~~~~~~~~~G~l~Dr~Grr~~~~~~~~~~~i~~~~~~~~~~--~--~~l~~~r~l~G~~~g~~~~~~~~i~~~~~~~~r 168 (477)
+.-.-|.++.+++.||+|||+.|..+.+++++..++.....+ . .++..+|++. .|++..++.|..|++|.+-|
T Consensus 392 laefPGlLIt~~iverlGRKkTMal~l~~f~iflfll~~c~~rn~~tvllf~arafi---sg~fqvaYvYtPEVyPTavR 468 (528)
T KOG0253|consen 392 LAEFPGLLITGVIVERLGRKKTMALSLILFGIFLFLLTTCKTRNAYTVLLFTARAFI---SGAFQVAYVYTPEVYPTAVR 468 (528)
T ss_pred HhhCCchhHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHhcCcchhHHHHHHHHHHH---hchheEEEEecCcccchhhh
Confidence 345678899999999999999999999999999887766542 2 3344556443 34455568899999999999
Q ss_pred hhHHHHHHHHhHHHHHHHHhHH
Q 011783 169 ALGLSTVSTAWGIGLIIGPALG 190 (477)
Q Consensus 169 ~~~~~~~~~~~~~g~~~g~~~~ 190 (477)
+...|..+.+.-+|.++.|+++
T Consensus 469 atgvGtcSsmaRIggI~~p~iA 490 (528)
T KOG0253|consen 469 ATGVGTCSSMARIGGIFSPVIA 490 (528)
T ss_pred hcchhhhhhHHhhhhhhhhHHH
Confidence 9999999999999999999999
No 237
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=98.88 E-value=6.1e-08 Score=94.46 Aligned_cols=142 Identities=12% Similarity=0.055 Sum_probs=97.6
Q ss_pred cccchhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhhhh
Q 011783 309 LNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNLLS 388 (477)
Q Consensus 309 ~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 388 (477)
.|-+ ....++.....+...+..+ +.++++|.+|||...+.+.++..++.++.....+.. .++....+.+++.
T Consensus 74 iG~~-~~~~w~~~~~~l~~av~~~-~~G~LSDlfGRr~~~i~g~~l~vvG~Iv~atA~~~~------~~iag~~l~Gvga 145 (599)
T PF06609_consen 74 IGGS-DNWSWFSTAWTLASAVSFP-FVGRLSDLFGRRYFFIIGSLLGVVGSIVCATAQNMN------TFIAGMVLYGVGA 145 (599)
T ss_pred cCCC-ccchHHHHHHHHHHHHHHH-hhHHHHHHhcchHHHHHHHHHHHhHHHHhhcCCcHH------HHHHHHHHHHHhh
Confidence 5654 3456666677777777777 889999999999999999999999988776655533 3444444445543
Q ss_pred HHHHhHHHHHHhhcCCcchhhHHhHHHHHHHHHHHHHhhhHHHHHHHHhhhhccccCCCCchHHHHHHHHHHHHHHHHHh
Q 011783 389 VSIITGLFILQNRAVDQDQRGAANGIAMTGMSLFKAAGPAGGGALFSWAQKRLDASFLPGSQMVFFVLNVVEAIGVLMTF 468 (477)
Q Consensus 389 ~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 468 (477)
+ ........++|..|.+.|+...++.....-.....+|.++..+..+. +|++.|++..++..++++..+
T Consensus 146 G-~~~~~~~~isEl~p~k~R~~~~~~~~~~~i~~~~~~~~ia~~~~~~~----------~WRw~~~~~~i~~~i~~vl~~ 214 (599)
T PF06609_consen 146 G-VQELAALAISELVPNKWRGLGLAIASIPFIITTWISPLIAQLFAAHS----------GWRWIFYIFIIWSGIALVLIF 214 (599)
T ss_pred H-HHHHHHHHHHHhcccchhhhHhHHHHHHHHhhhcccHHHHHHhccCC----------CcchHHHHHHHHHHHHHHHHH
Confidence 3 33345666899999999988776655444344445555544433322 899999999888777766554
Q ss_pred h
Q 011783 469 K 469 (477)
Q Consensus 469 ~ 469 (477)
+
T Consensus 215 ~ 215 (599)
T PF06609_consen 215 F 215 (599)
T ss_pred H
Confidence 4
No 238
>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only]
Probab=98.87 E-value=5.7e-08 Score=89.51 Aligned_cols=145 Identities=30% Similarity=0.477 Sum_probs=121.7
Q ss_pred HHHHHHHhhhchhchHhHHHHHHHHhcccc--cchhhhhhhHHHHHHHHHHHHHHhhhhhhhhhhcCCchhhHHHHHHHH
Q 011783 46 IWIIVLCTALPISSLFPFLYFMIKDFQIAK--REEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVV 123 (477)
Q Consensus 46 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~--~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~Grr~~~~~~~~~~~ 123 (477)
.....+....+.....+..+.+.++++.+. .+ .++..+.+.++..+++++.|.++||+|||+.+..+.....
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~ 80 (338)
T COG0477 7 LALAALLLGLDLGLLSPALPLLLSTLSLSSGRLL------YGLLLSAFFLGYAIGSLLAGPLGDRYGRRKVLIIGLLLFL 80 (338)
T ss_pred HHHHHHHHHHhcchHHHHHHHHHHHcCCCchhHH------HHHHHHHHHHHHHHHhhhhhhccccccchHHHHHHHHHHH
Confidence 344444455677777788888888888776 36 8999999999999999999999999999998888887766
Q ss_pred HHHHHHHhhhh--HHHHHHHHHHhhhcccchhhH-HHHhhhhccc-cchhhHHHHHHH-HhHHHHHHHHhHHHHhhhc
Q 011783 124 IFNTLFGLSVN--FWMAVLTRFLLGSLNGLLGPI-KAYACEIFRE-EHQALGLSTVST-AWGIGLIIGPALGGFLAQP 196 (477)
Q Consensus 124 i~~~~~~~~~~--~~~l~~~r~l~G~~~g~~~~~-~~~i~~~~~~-~~r~~~~~~~~~-~~~~g~~~g~~~~~~l~~~ 196 (477)
++.+..++..+ .+.+++.|+.+|++.+...+. .+++.|+.|+ ++|+...+.... ...+|..++|.+++.+...
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (338)
T COG0477 81 LGTLLLALAPNVGLALLLILRLLQGLGGGGLLPVASALLSEWFPEATERGLAVGLVTLGAGALGLALGPLLAGLLLGA 158 (338)
T ss_pred HHHHHHHhCccchHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 66677777666 999999999999999988887 9999999998 789999998888 6888999999888887764
No 239
>PRK09669 putative symporter YagG; Provisional
Probab=98.86 E-value=1.8e-08 Score=97.96 Aligned_cols=147 Identities=15% Similarity=0.188 Sum_probs=104.1
Q ss_pred HHHHHHHHHHhhhchhchHhHHHHHHHHhcccccchhhhhhhHHHHHHHHHHHHHHhhhhhhhhhhcCCchhhHHHHHHH
Q 011783 43 LFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASV 122 (477)
Q Consensus 43 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~Grr~~~~~~~~~~ 122 (477)
+..+....++............+++.++.-.+++. .+.+.....+...++.+++++++||+|+|+.+..+.++.
T Consensus 231 ~~~l~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~------~~~~~~~~~i~~ii~~~~~~~l~~r~gk~~~~~~~~~~~ 304 (444)
T PRK09669 231 WRIMFIFNVVLLTAVVTRGGATLYYVNYVLLRPDL------ATLFLVTGMIAGLFGALLSERLLGKFDRVRAFKWTIVAF 304 (444)
T ss_pred HHHHHHHHHHHHHHHHHHhhhhheeeeeecCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHH
Confidence 33344444444444444444444444433222222 456666777888899999999999999999999888766
Q ss_pred HHHHHHHHh--hhhHHHHHHHHHHhhhcccchhhH-HHHhhhhccc-------cchhhHHHHHHHHhHHHHHHHHhHHHH
Q 011783 123 VIFNTLFGL--SVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFRE-------EHQALGLSTVSTAWGIGLIIGPALGGF 192 (477)
Q Consensus 123 ~i~~~~~~~--~~~~~~l~~~r~l~G~~~g~~~~~-~~~i~~~~~~-------~~r~~~~~~~~~~~~~g~~~g~~~~~~ 192 (477)
++......+ .++.+.+++..++.|++.+...+. .++++|..+. ++.|..++..+....+|..+|+.++|.
T Consensus 305 ~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~am~ad~~d~~e~~~G~r~~g~~~s~~~~~~klg~alg~~i~g~ 384 (444)
T PRK09669 305 VILSALIFFIPPSNVWLIFALNILFNFIQNLTTPLQWSMFSDVVDYEEKRSGRRLDGLVFSTNLFAIKLGLAIGGAVVGW 384 (444)
T ss_pred HHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhcCcCcchHHHHHHHHHHHHHHHHHHHHHHH
Confidence 654433322 357777888889999999888888 9999998862 334667888999999999999999999
Q ss_pred hhh
Q 011783 193 LAQ 195 (477)
Q Consensus 193 l~~ 195 (477)
+.+
T Consensus 385 ll~ 387 (444)
T PRK09669 385 ILA 387 (444)
T ss_pred HHH
Confidence 887
No 240
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins.
Probab=98.86 E-value=7e-08 Score=83.81 Aligned_cols=132 Identities=14% Similarity=0.197 Sum_probs=108.8
Q ss_pred chhchHhHHHHHHHHhcccccchhhhhhhHHHHHHHHHHHHHHhhhhhhhhhhcCCchhhHHHHHHHHHHHHHHHhh---
Q 011783 56 PISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLS--- 132 (477)
Q Consensus 56 ~~~~~~~~~~~~~~~~~~s~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~Grr~~~~~~~~~~~i~~~~~~~~--- 132 (477)
..+.++..-|.+.+.+|.+.+| ...+.++..+|..+ .++.|.+.|++|+|.++.+|.+...++..+...+
T Consensus 17 t~Y~Fs~yS~~Lk~~l~~sq~~------l~~l~~~~~~G~~~-G~~~G~l~d~~gp~~~l~iG~~~~~~GY~~~~l~~~~ 89 (250)
T PF06813_consen 17 TTYTFSAYSPQLKSRLGYSQSQ------LNTLSTAGDIGSYF-GILAGLLYDRFGPWVVLLIGAVLGFVGYGLLWLAVSG 89 (250)
T ss_pred cccchhhhhHHHHHHhCCCHHH------HHHHHHHHHHHhhc-cHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 3456667778999999999999 99999999999886 4899999999999999999999999998877653
Q ss_pred ----hhHHHHHHHHHHhhhcccchhhH-HHHhhhhccccchhhHHHHHHHHhHHHHHHHHhHHHHhhh
Q 011783 133 ----VNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQ 195 (477)
Q Consensus 133 ----~~~~~l~~~r~l~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~ 195 (477)
.++|.+.+..++.|.+.+....+ .....+.|| ++||++.|+.-...+++..+-..+...+.+
T Consensus 90 ~i~~~~~~~~~~~~~l~~~s~~~~~ta~lvt~~~NFP-~~RG~vvgilk~~~GLSaai~t~i~~~~f~ 156 (250)
T PF06813_consen 90 RIPSLPVWLMCLFLFLGGNSSCWFNTASLVTCVRNFP-RSRGTVVGILKGFFGLSAAIFTQIYSAFFG 156 (250)
T ss_pred ccCccchHHHHHHHHHHcccHHHhhhHHHHHHHHhCc-cccCceehhhhHHHHhHHHHHHHHHHHHcC
Confidence 36788888888888887766555 566668887 689999999999999988776666555544
No 241
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=98.80 E-value=1.2e-06 Score=79.64 Aligned_cols=187 Identities=9% Similarity=-0.051 Sum_probs=133.9
Q ss_pred HHHHHHHHHhhhhhhHHHHHHhhcCcccCCccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHH
Q 011783 278 SIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTIP 357 (477)
Q Consensus 278 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 357 (477)
....++.+.+.........|.+-. . ++.+..+++++......+..+.++ -.+++.||+|.|+.+..++.+.++
T Consensus 18 ~t~lFfl~G~~~~l~diLip~l~~-~-----f~ls~~~a~liqfaff~gYf~~~l-pa~~~~kk~gyk~gi~lgL~l~av 90 (422)
T COG0738 18 LTSLFFLWGFITCLNDILIPHLKE-V-----FDLTYFEASLIQFAFFGGYFIMSL-PAGLLIKKLGYKAGIVLGLLLYAV 90 (422)
T ss_pred HHHHHHHHHHHhhcchhhHHHHHH-H-----hCccHHHHHHHHHHHHHHHHHHhc-cHHHHHHHhhhHHHHHHHHHHHHH
Confidence 334444444444444455554333 2 899999999999999999999888 889999999999999999999999
Q ss_pred HHHHHHHHHHhhhhhHHHHHHHHHHHHhhhhHHHHhHHHHHHhhcCCcchhhHHhHHHHHHHHHHHHHhhhHHHHHHHHh
Q 011783 358 LLTSYPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIAMTGMSLFKAAGPAGGGALFSWA 437 (477)
Q Consensus 358 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~ 437 (477)
++.++.-..... .+..+++..++.+.+.+..-.....++...-|++....-+.+.+.++.+|++++|.+++.+..+.
T Consensus 91 g~~lF~pAa~~~---~y~~FL~~lFila~Gi~~LetaaNp~v~~lg~~~~a~~rlnl~q~fn~lGa~~gp~~g~~lils~ 167 (422)
T COG0738 91 GAALFWPAASSK---SYGFFLVALFILASGIGLLETAANPYVTLLGKPESAAFRLNLAQAFNGLGAILGPLLGSSLILSG 167 (422)
T ss_pred HHHHHhhhhhhh---hHHHHHHHHHHHHhhhHHHHhccchHHHHhCCchhHHHHHHHHHHhhhhHHHHHHHHHHHHHHhh
Confidence 988775443322 23344444455566667777888888899899888899999999999999999999999998841
Q ss_pred hh---------hccccCCCCchHHHHHHHHHHHHHHHHHhhhhhhc
Q 011783 438 QK---------RLDASFLPGSQMVFFVLNVVEAIGVLMTFKPFLAQ 474 (477)
Q Consensus 438 ~~---------~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 474 (477)
.. .....+...++.+|...+...++..+.......|+
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~v~~pYl~~~~~lvll~v~~~~~k~p~ 213 (422)
T COG0738 168 VALTMSAAQILAIKGADASSVQFPYLILAGLLVLLAVLILLSKLPD 213 (422)
T ss_pred hhhccCHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHhccCCc
Confidence 00 00001111477888888877777666655533343
No 242
>PF06779 DUF1228: Protein of unknown function (DUF1228); InterPro: IPR010645 This entry represents the N terminus of several putative bacterial membrane proteins, which may be sugar transporters. Note that many members are hypothetical proteins.
Probab=98.74 E-value=4.7e-08 Score=68.24 Aligned_cols=81 Identities=16% Similarity=0.271 Sum_probs=74.9
Q ss_pred hhhchhchHhHHHHHHHHhcccccchhhhhhhHHHHHHHHHHHHHHhhhhhhhhhhcCCchhhHHHHHHHHHHHHHHHhh
Q 011783 53 TALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLS 132 (477)
Q Consensus 53 ~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~Grr~~~~~~~~~~~i~~~~~~~~ 132 (477)
..+++..+.|.+|.+++|.++|.++ .|++.+...+||.+|.+...++.++..+++.+..+++...+..+.+++.
T Consensus 4 mGigRFayTplLP~M~~~~~ls~~~------ag~lasaNy~GYL~GAl~~~~~~~~~~~~~~~~~~l~~~~~~~~~ma~~ 77 (85)
T PF06779_consen 4 MGIGRFAYTPLLPLMQADGGLSLSQ------AGWLASANYLGYLVGALLASRLPRHSRPRRLLRAGLLLTVLSTAAMALT 77 (85)
T ss_pred hhhHHHHHHhHhHHHHHhcCCCHHH------HHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHH
Confidence 3567788999999999999999999 9999999999999999999999999989999999999999999999999
Q ss_pred hhHHHHH
Q 011783 133 VNFWMAV 139 (477)
Q Consensus 133 ~~~~~l~ 139 (477)
++++...
T Consensus 78 ~~~~~w~ 84 (85)
T PF06779_consen 78 HSFWLWS 84 (85)
T ss_pred hchHHHh
Confidence 8876543
No 243
>PRK11462 putative transporter; Provisional
Probab=98.73 E-value=1.5e-07 Score=91.62 Aligned_cols=148 Identities=11% Similarity=0.122 Sum_probs=98.7
Q ss_pred HHHHHHHHHHhhhchhchHhHHHHHHHHhcccccchhhhhhhHHHHHHHHHHHHHHhhhhhhhhhhcCCchhhHHHHHHH
Q 011783 43 LFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASV 122 (477)
Q Consensus 43 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~Grr~~~~~~~~~~ 122 (477)
+..+....++..+..........++.+....+++. .+.+.+.+.++..++.+++++++||+|+|+++..+..+.
T Consensus 230 ~~~l~~~~~~~~~~~~~~~~~~~y~~~y~~g~~~~------~~~~l~~~~i~~iig~~l~~~l~~r~gkk~~~~~~~~~~ 303 (460)
T PRK11462 230 WRIVGLLTIFNILAVCVRGGAMMYYVTWILGTPEV------FVAFLTTYCVGNLIGSALAKPLTDWKCKVTIFWWTNALL 303 (460)
T ss_pred HHHHHHHHHHHHHHHHHHHhHhhhhhhhhcCChHH------HHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHH
Confidence 33444444555555555555555555554433333 567778888899999999999999999999887665544
Q ss_pred HHHHHHHHhhh--hHHHHHHHHHHhhhcccchhhH-HHHhhhhcc-------ccchhhHHHHHHHHhHHHHHHHHhHHHH
Q 011783 123 VIFNTLFGLSV--NFWMAVLTRFLLGSLNGLLGPI-KAYACEIFR-------EEHQALGLSTVSTAWGIGLIIGPALGGF 192 (477)
Q Consensus 123 ~i~~~~~~~~~--~~~~l~~~r~l~G~~~g~~~~~-~~~i~~~~~-------~~~r~~~~~~~~~~~~~g~~~g~~~~~~ 192 (477)
++..++..+.+ +...+++.-++.|++.+...+. .++++|..+ +++.|..++.......+|..+|+.++|.
T Consensus 304 ~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~l~~~m~ad~~d~~e~~tG~r~~g~~~a~~~f~~Klg~alg~~i~g~ 383 (460)
T PRK11462 304 AVISLAMFFVPMQASITMFVFIFVIGVLHQLVTPIQWVMMSDTVDYGEWCNGKRLTGISFAGTLFVLKLGLAFGGALIGW 383 (460)
T ss_pred HHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhHHhcCCCchHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44333333322 2334445556678777666666 778888776 3334555677778899999999999998
Q ss_pred hhhc
Q 011783 193 LAQP 196 (477)
Q Consensus 193 l~~~ 196 (477)
+.+.
T Consensus 384 iL~~ 387 (460)
T PRK11462 384 MLAY 387 (460)
T ss_pred HHHH
Confidence 8763
No 244
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=98.72 E-value=1.3e-07 Score=88.98 Aligned_cols=149 Identities=12% Similarity=0.206 Sum_probs=117.5
Q ss_pred hHHHHHHHHHHHhhhchhchHhHHHHHHHH-hcccccchhhhhhhHHHHHHHHHHHHHHhhhhhhhhhhcCCchhhHHHH
Q 011783 41 TELFSIWIIVLCTALPISSLFPFLYFMIKD-FQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGT 119 (477)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~s~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~Grr~~~~~~~ 119 (477)
|.+..+.+..++......+......++.+. +|.++.+ ..+.......+..++.+++.++.+|+|+|+++.++.
T Consensus 236 rp~~~~l~~~l~~~~~~~i~~s~~~yy~~y~lg~~~l~------~~~~~~~~~~~~l~~~~~~p~L~~~~gkk~~~~~~~ 309 (467)
T COG2211 236 RPLLLLLLMNLLLFIAFNIRGSIMVYYVTYVLGDPELF------AYLLLLASGAGLLIGLILWPRLVKKFGKKKLFLIGL 309 (467)
T ss_pred chHHHHHHHHHHHHHHHHHHhhhhheeEEEEcCChHHH------HHHHHHHHHHHHHHHHHhHHHHHHHhchHHHHHHHH
Confidence 445555556666666666666666655433 4444444 667778888888888999999999999999999999
Q ss_pred HHHHHHHHHHHhhh--hHHHHHHHHHHhhhcccchhhH-HHHhhhhccc-------cchhhHHHHHHHHhHHHHHHHHhH
Q 011783 120 ASVVIFNTLFGLSV--NFWMAVLTRFLLGSLNGLLGPI-KAYACEIFRE-------EHQALGLSTVSTAWGIGLIIGPAL 189 (477)
Q Consensus 120 ~~~~i~~~~~~~~~--~~~~l~~~r~l~G~~~g~~~~~-~~~i~~~~~~-------~~r~~~~~~~~~~~~~g~~~g~~~ 189 (477)
++..++.++..+.+ +.+.+++..++.+++.+...+. .++++|..+- ++-|...+......=+|..++..+
T Consensus 310 ~~~~i~~~~~~f~~~~~~~l~~~~~~i~~~g~~~~~~l~wam~~d~vDyge~~TG~R~eGi~~s~~tF~~K~g~ala~~~ 389 (467)
T COG2211 310 LLLAVGYLLLYFTPAGSVVLIVVALIIAGVGTGIANPLPWAMVADTVDYGEWKTGVRREGIVYSGMTFFRKLGLALAGFI 389 (467)
T ss_pred HHHHHHHHHHHhhcCcchHHHHHHHHHHHHHhhccccccHHHhcchhhHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHH
Confidence 99999999888876 7888999999999999998887 8888887752 344677788888888899999888
Q ss_pred HHHhhh
Q 011783 190 GGFLAQ 195 (477)
Q Consensus 190 ~~~l~~ 195 (477)
.|++..
T Consensus 390 ~g~~L~ 395 (467)
T COG2211 390 PGWILG 395 (467)
T ss_pred HHHHHH
Confidence 888776
No 245
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=98.70 E-value=8e-07 Score=79.44 Aligned_cols=153 Identities=16% Similarity=0.132 Sum_probs=122.7
Q ss_pred HHHHHHHHHHhhhchhchHhHHHHHHHHhcccccchhhhhhhHHHHHHHHHHHHHHhhhhhhhhhhc-CCchhhHHHHHH
Q 011783 43 LFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRY-GRKPVIIMGTAS 121 (477)
Q Consensus 43 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~-Grr~~~~~~~~~ 121 (477)
-+.+.+..-+..+..+....-+|.+..|-|.|..+ .|++.+...+.....++....+++|. ++|+..+....+
T Consensus 210 aW~vtLfmGlqS~~~Y~~~~WLP~ili~~G~sa~~------aG~llsl~~l~~~~~~ll~P~la~R~~n~r~~~~~~~~~ 283 (395)
T COG2807 210 AWQVTLFMGLQSLLYYIVIGWLPAILIDRGLSAAE------AGSLLSLMQLAQLPTALLIPLLARRSKNQRPLVVLALLL 283 (395)
T ss_pred hHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCHHH------hhhHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHH
Confidence 44455555566677778888899999999999999 99999999999999999999999965 788888888888
Q ss_pred HHHHHHHHHhhhhHHHHHHHHHHhhhcccchhhH-HHHhhhhcc-ccchhhHHHHHHHHhHHHHHHHHhHHHHhhhcccc
Q 011783 122 VVIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFR-EEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEK 199 (477)
Q Consensus 122 ~~i~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~-~~~i~~~~~-~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~ 199 (477)
+.++.+.+.+.+.-..++- -++.|+|.|...|. ...+.+..+ +++-++-.++.+....+=..+||.+.|++.+..++
T Consensus 284 ~l~G~~G~~~~P~~~~~lw-~~llG~G~G~~F~laL~li~~rs~~a~~Aa~LSgmaQg~GYllAa~GP~l~G~lhDa~gs 362 (395)
T COG2807 284 MLVGLVGLLLAPGQLPILW-ALLLGLGQGGAFPLALTLILLRSSDAAIAAALSGMAQGVGYLLAAFGPWLFGFLHDATGS 362 (395)
T ss_pred HHHHHHHHHHhhhhHHHHH-HHHHhCccchHHHHHHHHHHhhcCChHHHHHHHHHhhhhhHHHHhhhhhhHhHHHHhcCC
Confidence 8888888888764433333 48999998888887 888887776 45556666677777777788899999999997766
Q ss_pred CCc
Q 011783 200 YPN 202 (477)
Q Consensus 200 ~~~ 202 (477)
|+.
T Consensus 363 w~~ 365 (395)
T COG2807 363 WSA 365 (395)
T ss_pred hHH
Confidence 643
No 246
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=98.69 E-value=7.1e-07 Score=85.92 Aligned_cols=155 Identities=15% Similarity=0.075 Sum_probs=118.0
Q ss_pred CccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhh
Q 011783 307 GGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNL 386 (477)
Q Consensus 307 ~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 386 (477)
++.++...+.+.+.+.+.++.+++.+ .++.+.||++..+.+....++..+..++-....+ ...+++.-++.|+
T Consensus 74 edl~~~~~~l~~~~t~F~v~Yii~~~-p~~~L~~r~~ls~~l~~~~~~w~~~~~~~~~~~s------~~~~ialr~llGl 146 (495)
T KOG2533|consen 74 EDLKLVGNQLGVLDTVFYVGYIIGQF-PSGLLGDRFPLSKGLSVSGILWGLFGFLTAAVHS------FPGLIALRFLLGL 146 (495)
T ss_pred cccchhhhhhhhHHHHHHHHHHHHHh-hHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHhh------hHHHHHHHHHHHH
Confidence 45677788899999999999999999 8999999999555554444443333322222222 2345556667788
Q ss_pred hhHHHHhHHHHHHhhcCCcchhhHHhHHHHHHHHHHHHHhhhHHHHHHHHhhhhccccCCCCchHHHHHHHHHHHHHHHH
Q 011783 387 LSVSIITGLFILQNRAVDQDQRGAANGIAMTGMSLFKAAGPAGGGALFSWAQKRLDASFLPGSQMVFFVLNVVEAIGVLM 466 (477)
Q Consensus 387 ~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 466 (477)
+.+..+|....++...+.+++||..+|+.+....+|+++|+.++..+.+..+...- .||++.|++-+++.++..++
T Consensus 147 ~es~~wP~~~~~lg~wy~~~e~g~r~~~~~a~~~~g~i~ggliA~g~~~~~~~~~~----~gW~~~FiI~G~i~~~~gi~ 222 (495)
T KOG2533|consen 147 FESGGWPGVVAILGNWYGKSERGLRMGIWYASASLGNIFGGLIAYGVFKLNGSGGL----AGWRWLFIIEGVITLVLGIV 222 (495)
T ss_pred HhcccchHHHHHHHhhcChhhhhhhHHHHHHhcchhhHHHHHHHHHhhhhcCCCCc----CCceeehhHHHHHHHHHHhe
Confidence 99999999999999999999999999999999999999999998887763322111 28999999999988888776
Q ss_pred Hhhhhhh
Q 011783 467 TFKPFLA 473 (477)
Q Consensus 467 ~~~~~~~ 473 (477)
.++ ++|
T Consensus 223 ~f~-~lp 228 (495)
T KOG2533|consen 223 VFF-FLP 228 (495)
T ss_pred EEE-Eec
Confidence 655 344
No 247
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only]
Probab=98.65 E-value=2.3e-06 Score=84.67 Aligned_cols=144 Identities=15% Similarity=-0.024 Sum_probs=113.8
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhhhhHHHHh
Q 011783 314 QMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNLLSVSIIT 393 (477)
Q Consensus 314 ~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 393 (477)
.+.+++.+...++..++++ +.++++|++|||+.+..+.+...++.++.....+ ...+.+.=++.|++.++...
T Consensus 89 ~~~s~~~s~~~lga~~g~l-~~g~l~d~~GRk~~l~~~~~~~~iG~ii~~~a~~------~~~l~~GR~l~G~g~G~~~~ 161 (513)
T KOG0254|consen 89 VRQGLLTSILNLGALVGSL-LAGRLGDRIGRKKTLLLAVVLFLIGAIIIALAPS------WYQLIVGRILTGLGVGGASV 161 (513)
T ss_pred HHHHHHHHHHHHHHHHHHH-HHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhhh------HHHHHHHHHHhccchhhhhh
Confidence 3458999999999999999 8999999999999999999999999888877764 33566666777888888888
Q ss_pred HHHHHHhhcCCcchhhHHhHHHHHHHHHHHHHhhhHHHHHHHHhhhhccccCCCCchHHHHHHHHHHHHHHHHHhhhhhh
Q 011783 394 GLFILQNRAVDQDQRGAANGIAMTGMSLFKAAGPAGGGALFSWAQKRLDASFLPGSQMVFFVLNVVEAIGVLMTFKPFLA 473 (477)
Q Consensus 394 ~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 473 (477)
....+.+|..|++.||...+..+....+|..++ .+.+...++. . .+|+..+.+..+.+++-.+..++ .|
T Consensus 162 ~~piy~sEiap~~~RG~l~~~~~l~~~~Gi~~~-~~~~~~~~~~-~-------~~Wr~~~~~~~i~~~~~~~~~~~--~p 230 (513)
T KOG0254|consen 162 LAPVYISEIAPAHIRGTLVSLYQLFITIGILLG-YCINYGTSKV-Y-------AGWRIPLGLALIPAVILALGMLF--LP 230 (513)
T ss_pred cchhhHhhcCChhhhHHHHHHHHHHHHHHHHHH-HHHhhhhccC-C-------ccHHHHHHHHHHHHHHHHHHHHh--CC
Confidence 889999999999999999999999888888777 5444444332 1 17888887777777766666333 55
Q ss_pred cc
Q 011783 474 QR 475 (477)
Q Consensus 474 ~~ 475 (477)
|+
T Consensus 231 es 232 (513)
T KOG0254|consen 231 ES 232 (513)
T ss_pred CC
Confidence 43
No 248
>KOG3762 consensus Predicted transporter [General function prediction only]
Probab=98.64 E-value=1.2e-07 Score=88.78 Aligned_cols=152 Identities=21% Similarity=0.340 Sum_probs=130.5
Q ss_pred HHHHHHHhhhchhchHhHHHHHHHHhcccccchhhhhhhHHHHHHHHHHHHHHhhhhhhhhhhcCCchhhHHHHHHHHHH
Q 011783 46 IWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIF 125 (477)
Q Consensus 46 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~Grr~~~~~~~~~~~i~ 125 (477)
+++..++.+...+.+...+-...||.+..+.- .|........+-++.-++.+++.+|+|+-+++.+++.+..+=
T Consensus 376 ff~~av~mG~g~~lv~tFLfWHled~~~~~~L------fGv~~a~~~~gEI~~~ffs~klI~kiGHv~v~~lgLa~~~~R 449 (618)
T KOG3762|consen 376 FFFVAVVMGAGVGLVFTFLFWHLEDLGGIKTL------FGVVSALCHAGEILFYFFSFKLIEKIGHVNVMYLGLACNVGR 449 (618)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHhhcCCccee------eeehhhhhccchHHHHHHHHHHHHHhcccceeeehhhHHHHH
Confidence 44455555666666667777778888877777 888888888888999999999999999999999999999999
Q ss_pred HHHHHhhhhHHHHHHHHHHhhhcccchhhH-HHHhhhhccccchhhHHHHHHH-HhHHHHHHHHhHHHHhhhccccCCcc
Q 011783 126 NTLFGLSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVST-AWGIGLIIGPALGGFLAQPAEKYPNL 203 (477)
Q Consensus 126 ~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~-~~~~g~~~g~~~~~~l~~~~~~~~~~ 203 (477)
.+.....+|.|..+..-+++|+..+..+.+ .+|+++..||+-|..+.++.+. ..++|-.+|.++||.+.+ .
T Consensus 450 f~~~S~L~n~W~vLPieilqgit~aliWaa~~sY~s~vaPp~l~at~Q~l~~g~f~GlG~g~GslIGG~~v~-------~ 522 (618)
T KOG3762|consen 450 FLYYSYLQNPWMVLPIEILQGITHALIWAAIISYASHVAPPGLRATAQGLLQGIFHGLGKGLGSLIGGFVVE-------R 522 (618)
T ss_pred HHHHHHhcCchheeeHHHHHHHHHHHHHHHHHHHHHhhCCCcchHHHHHHHHHHhcccCcchhhhhhhhhhe-------e
Confidence 999999999999999999999999988877 9999999999999999997755 467899999999999998 5
Q ss_pred ccccccc
Q 011783 204 FSSESLF 210 (477)
Q Consensus 204 ~~~~~~~ 210 (477)
|+-+..|
T Consensus 523 fg~~ttf 529 (618)
T KOG3762|consen 523 FGARTTF 529 (618)
T ss_pred ehhHHHH
Confidence 6666555
No 249
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=98.62 E-value=7e-08 Score=93.89 Aligned_cols=123 Identities=7% Similarity=-0.048 Sum_probs=105.5
Q ss_pred HHhcccccchhhhhhhHHHHHHHHHHHHHHhhhhhhhhhhcCCchhhHHHHHHHHHHHHHHHhh----------hhHHHH
Q 011783 69 KDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLS----------VNFWMA 138 (477)
Q Consensus 69 ~~~~~s~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~Grr~~~~~~~~~~~i~~~~~~~~----------~~~~~l 138 (477)
+++|.++.+ .|++.....++..++....+++.+|++.|+++.++.++.+++....... ++.+..
T Consensus 281 ~~lG~s~~~------~G~~~~~~~v~~i~g~~~~~~~~~~~~~r~~l~~~~~l~~~~~~~~~~l~~~~~~~~gi~~~~~~ 354 (468)
T TIGR00788 281 QCLPGGPSF------SGMSKVVGNLGSLCGVGGYDRFLKTFPYRLLFGVTTLLYTLSSLFDLILVKRWNLAFGISDEVFV 354 (468)
T ss_pred ccCCCCcch------hhhHHHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHhCceeeeeccccccCCCCeeee
Confidence 568999999 9999999999999999999999999999999999999999887654311 333445
Q ss_pred HHHHHHhhhcccchhhH-HHHhhhhccccchhhHHHHHHHHhHHHHHHHHhHHHHhhhcc
Q 011783 139 VLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPA 197 (477)
Q Consensus 139 ~~~r~l~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~ 197 (477)
...-++.+++.+..... ..++.+..|+++++...++.+...++|..+++.+++.+.+..
T Consensus 355 ~~~~~l~~~~~g~~~~~~~~~~~~~~p~~~egt~~al~~s~~~lg~~v~~~~gg~l~~~~ 414 (468)
T TIGR00788 355 LGDSIIAEVLAQLKFMPFLVLLARLCPSGCESSVFALLASILHLGSSVSGFLGVLLMETI 414 (468)
T ss_pred eehhHHHHHHHHHHHccHHHHHHHhCCCCceehHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 55667888887775554 999999999999999999999999999999999999998843
No 250
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only]
Probab=98.60 E-value=1e-06 Score=87.62 Aligned_cols=138 Identities=17% Similarity=0.127 Sum_probs=116.1
Q ss_pred cccchhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhhhh
Q 011783 309 LNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNLLS 388 (477)
Q Consensus 309 ~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 388 (477)
...+.....+..++..++..+|.+ +.|.++||+|||+++..+..+..++....++..+.. .+.+.=++.|++.
T Consensus 113 ~c~~~~~~~~~~s~~~~G~~vG~~-i~g~lsD~~GRk~~~~~~~~~~~i~~~~~a~a~~~~------~~~~~Rfl~G~~~ 185 (521)
T KOG0255|consen 113 VCDSSTLVALGQSLFFLGVLVGSL-IFGPLSDRFGRKPVLLVSLLLFIIFGILTAFAPNYW------MFLIFRFLSGFFG 185 (521)
T ss_pred eeCcHhHHHHHHHHHHHHHHHHHh-hheehHhhcccHHHHHHHHHHHHHHHHHHHHhCcHH------HHHHHHHHHHhhc
Confidence 556677788888888899999988 889999999999999999999998887777766533 5556666677888
Q ss_pred HHHHhHHHHHHhhcCCcchhhHHhHHHHHHHHHHHHHhhhHHHHHHHHhhhhccccCCCCchHHHHHHHHHHHHHHHH
Q 011783 389 VSIITGLFILQNRAVDQDQRGAANGIAMTGMSLFKAAGPAGGGALFSWAQKRLDASFLPGSQMVFFVLNVVEAIGVLM 466 (477)
Q Consensus 389 ~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 466 (477)
.+.......+..|.++++.|+.+..+ ......++.+++...+++.. +|++.+++..+...+..+.
T Consensus 186 ~~~~~~~~~~~~E~~~~~~R~~~~~~-~~~~~~~~~~~~~~~a~~~~------------~Wr~~~~~~~~~~~~~~~~ 250 (521)
T KOG0255|consen 186 SGPLTVGFGLVAEIVSPKQRGLALTL-GGFFFVGGLMLPAGAAYITR------------DWRWLFWIISIPSGLFLLL 250 (521)
T ss_pred cchhHHhHhhheeecCcchhhHHHHH-HHHHHHHHHHHHHHHHHHHh------------hHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999 88888888899998888876 5788888888777776665
No 251
>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans. UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. Genetic studies suggest that these three proteins forms complex that coordinates muscle contraction. The function of UNC-93 is not known but is most likely an ion channel regulatory protein [].
Probab=98.59 E-value=2e-06 Score=68.94 Aligned_cols=107 Identities=21% Similarity=0.191 Sum_probs=91.7
Q ss_pred HHHHHHHHHHHhhhhhhhhhhcCCchhhHHHHHHHHHHHHHHHhhhhHHHHHHHHHHhhhcccchhhH-HHHhhhhcccc
Q 011783 88 GSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREE 166 (477)
Q Consensus 88 ~s~~~~~~~~~~~~~G~l~Dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~-~~~i~~~~~~~ 166 (477)
.++......+.+++.+.+.+++|.|+.++++.+.+.+-.... +-++.+.++.+-++.|++.+..+++ ..++.+..+++
T Consensus 43 lai~Y~~~~~s~l~~P~iv~~lg~K~sm~lg~~~y~~y~~~~-~~~~~~~l~~~s~l~G~~~a~lW~aqg~ylt~~s~~~ 121 (156)
T PF05978_consen 43 LAILYGSFAISCLFAPSIVNKLGPKWSMILGSLGYAIYIASF-FYPNSYTLYPASALLGFGAALLWTAQGTYLTSYSTEE 121 (156)
T ss_pred HHHHHHHHHHHHHhHHHHHHHHhhHHHHHHHHHHHHHHHHHH-HhhhHHHHHHHHHHHhhhhHHhhHhhhHHHHHcCCHH
Confidence 455566677888889999999999999999999998666554 4567889999999999999999998 89999999999
Q ss_pred chhhHHHHHHHHhHHHHHHHHhHHHHhhh
Q 011783 167 HQALGLSTVSTAWGIGLIIGPALGGFLAQ 195 (477)
Q Consensus 167 ~r~~~~~~~~~~~~~g~~~g~~~~~~l~~ 195 (477)
+|++..++.......+.++|.++.-.+..
T Consensus 122 ~~~~~~~ifw~i~~~s~i~G~~~~~~~~~ 150 (156)
T PF05978_consen 122 TIGRNTGIFWAIFQSSLIFGNLFLFFIFQ 150 (156)
T ss_pred HHhhHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 99999999998988888888877666543
No 252
>KOG1237 consensus H+/oligopeptide symporter [Amino acid transport and metabolism]
Probab=98.55 E-value=0.00023 Score=70.23 Aligned_cols=162 Identities=13% Similarity=0.061 Sum_probs=117.5
Q ss_pred CCchhHHHHHHHHHHHhhhch-hchHhHHHHHHHHhcccccchhhhhhhHHHHHHHHHHHHHHhhhhhhhhhhc-CCchh
Q 011783 37 GLPITELFSIWIIVLCTALPI-SSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRY-GRKPV 114 (477)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~s~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~-Grr~~ 114 (477)
...|+....+.....+..+.. +.....+.++.+++|.+... +.-..+.+.-......+..+.++|-| ||-+.
T Consensus 33 ~g~~~s~~~il~~e~~e~~a~~g~~~nlv~ylt~~~~~~~~~------aa~~v~~f~G~~~~~~l~g~~laD~f~gry~t 106 (571)
T KOG1237|consen 33 TGGWLSAPFILGNEVLERLAFFGLVSNLVTYLTLELHASGGG------AANNVNAFGGTQFLLPLLGAFLADSFLGRYFT 106 (571)
T ss_pred echhHhHHHHHHHHHHHHHhHhcchhHHHHHHHHHhccchHH------HHHHHHHHhhHHHHHHHHHHHHHHHHhHHHHH
Confidence 334454444444445555544 34467778899999998877 78888888888888899999999986 99999
Q ss_pred hHHHHHHHHHHHHHHHhhhh-------------------------HHHHHHHHHHhhhcccchhhH-HHHhhhhcc---c
Q 011783 115 IIMGTASVVIFNTLFGLSVN-------------------------FWMAVLTRFLLGSLNGLLGPI-KAYACEIFR---E 165 (477)
Q Consensus 115 ~~~~~~~~~i~~~~~~~~~~-------------------------~~~l~~~r~l~G~~~g~~~~~-~~~i~~~~~---~ 165 (477)
+.++.++..++.++...+.. ...++.+.-+..+|.|..-|+ .+.-+|-++ +
T Consensus 107 I~~~s~i~~~G~~~lt~~a~~~~l~p~~~~~~~~~~~c~~~s~~q~~~~~~~l~lia~G~gg~r~~~~~fGadQfd~~~~ 186 (571)
T KOG1237|consen 107 INIGSLISLLGLFGLTLSAMIPALLPFMCKFKPGGNVCESPSKLQLAVLYGALYLIALGAGGIRPCLLAFGADQFDELDP 186 (571)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhcCCccccCCCCCCcccCcchHHHHHHHHHHHHheeccCCCCCcchhhcccccCccCc
Confidence 99999998888655544221 235666667778899998888 888899998 2
Q ss_pred -c--chhhHHHHHHHHhHHHHHHHHhHHHHhhhccccCCcccc
Q 011783 166 -E--HQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFS 205 (477)
Q Consensus 166 -~--~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~~~ 205 (477)
+ .+...+.++....++|..++..+-.++-+ ..+|.+.|+
T Consensus 187 ~~~~~~~~fFnW~yf~~~~g~l~a~t~~vyiq~-~~~w~lgf~ 228 (571)
T KOG1237|consen 187 VEVKGIPSFFNWFYFSQNGGALLAQTVLVYIQD-NVGWKLGFG 228 (571)
T ss_pred chhhCcccchhHHHHHHHHHHHHHHHHHHhhhh-cccceeecc
Confidence 2 22367788888999999998888777765 344544444
No 253
>PF12832 MFS_1_like: MFS_1 like family
Probab=98.50 E-value=5.5e-07 Score=62.62 Aligned_cols=71 Identities=23% Similarity=0.529 Sum_probs=61.6
Q ss_pred HHHHHHHhhhchhchHhHHHHHHHHhcccccchhhhhhhHHHHHHHHHHHHHHhhhhhhhhhhcCCchhhHHHHHHH
Q 011783 46 IWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASV 122 (477)
Q Consensus 46 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~Grr~~~~~~~~~~ 122 (477)
+-...++.+...+...|.+|.+.++.|.+..+ +|.+.++..+...++++++|.++||+++++.++.....+
T Consensus 5 lk~~yf~~f~~~g~~~Pfl~~~~~~~Gl~~~~------iGil~~i~~~~~~~~~pl~g~laDk~~~~~~~l~~~~~~ 75 (77)
T PF12832_consen 5 LKAFYFFYFAALGCLYPFLPLYLKQLGLSPSQ------IGILSAIRPLIRFLAPPLWGFLADKFGKRKVILLGSLFM 75 (77)
T ss_pred HHHHHHHHHHHHHHHHhhhhHhhhhcCCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHCccHHHHHHHHHH
Confidence 34455666777788899999999999999999 999999999999999999999999999999877765543
No 254
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=98.46 E-value=3.2e-06 Score=77.52 Aligned_cols=142 Identities=20% Similarity=0.187 Sum_probs=118.3
Q ss_pred HHHHhhhchhchHhHHH-HHHHHhcccccchhhhhhhHHHHHHHHHHHHHHhhhhhhhhh-hcCCchhhHHHHHHHHHHH
Q 011783 49 IVLCTALPISSLFPFLY-FMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVAD-RYGRKPVIIMGTASVVIFN 126 (477)
Q Consensus 49 ~~~~~~~~~~~~~~~~~-~~~~~~~~s~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~D-r~Grr~~~~~~~~~~~i~~ 126 (477)
..++..++..+--.++. +=.+-||++..| ...+......|..++-...|++.. |.++|+.-.+++....++.
T Consensus 216 fl~l~t~a~~~QD~iLEPygg~Vfgmsv~e------TT~Lta~~~~G~L~G~~~~g~~l~~~~~~~~~a~~G~~~~~~~f 289 (403)
T PF03209_consen 216 FLFLGTLAFFMQDVILEPYGGEVFGMSVGE------TTRLTAFWGGGTLLGMLLAGFLLSRRLGKKRTAALGCLLGALAF 289 (403)
T ss_pred HHHHHHHHHHhhHHHcCCchhHHcCCCHHH------HHHHHHHHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHHHH
Confidence 33444455555556664 445669999999 899999999999999999999888 6788888888888887776
Q ss_pred HHHHh---hhhHHHHHHHHHHhhhcccchhhH-HHHhhhhccccchhhHHHHHHHHhHHHHHHHHhHHHHhhhc
Q 011783 127 TLFGL---SVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQP 196 (477)
Q Consensus 127 ~~~~~---~~~~~~l~~~r~l~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~ 196 (477)
.+..+ ..+.+.+...-++.|++.|.+... .+...|..++++.|..+|.+.....++..+|-.++|.+.+.
T Consensus 290 ~lii~a~~~~~~~~~~~~~~l~G~g~G~f~vgals~mM~lt~~~~aG~~mG~WGaaQA~A~Glg~~~GG~~~D~ 363 (403)
T PF03209_consen 290 ALIILAGPLGSPWLFRPGVFLLGLGNGLFTVGALSLMMDLTSAGRAGLFMGAWGAAQAIARGLGTFLGGALRDL 363 (403)
T ss_pred HHHHHHHhcccchHHHHHHHHHHHhhhHHHHHHHHHHHhCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 65444 457888999999999999999988 99999999999999999999999999999999999998874
No 255
>PF13000 Acatn: Acetyl-coenzyme A transporter 1; InterPro: IPR024371 Acetyl-coenzyme A transporter 1 (also known as acatn) is a multipass transmembrane protein that appears to promote 9-O-acetylation in gangliosides [, ]. This entry represents acatn and its homologues.; GO: 0008521 acetyl-CoA transporter activity, 0016021 integral to membrane
Probab=98.41 E-value=3.5e-05 Score=72.18 Aligned_cols=381 Identities=12% Similarity=0.044 Sum_probs=188.2
Q ss_pred HHHHHHHHHHhhhchhchHhHHHHHHHH--hcccccchhhhhhhHHHHHHHHHHHHHHhhhhhhhhh-----hcCCchhh
Q 011783 43 LFSIWIIVLCTALPISSLFPFLYFMIKD--FQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVAD-----RYGRKPVI 115 (477)
Q Consensus 43 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~s~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~D-----r~Grr~~~ 115 (477)
+.++.+.+++.+...+.....+|.+.++ -+.|.+| .|...-+ ...+ -.-++|.++.| |+||||.-
T Consensus 2 ~~lL~~LY~lQGiP~GL~~gsiPflL~~~~~~~sy~q------~~~fSla-~~Pf-SlKlLWaPiVDs~y~~~~GRRKSW 73 (544)
T PF13000_consen 2 IALLVLLYFLQGIPLGLAFGSIPFLLQSMAKKVSYSQ------QAIFSLA-SYPF-SLKLLWAPIVDSVYSKRIGRRKSW 73 (544)
T ss_pred eeHHHHHHHHcCcccccccccchhhhccccCCCChhH------heeeeee-echh-HHHHhhhhhhhhhcccccCCcchh
Confidence 3456777888888888877788988888 7788777 4443211 1111 12356666666 89999985
Q ss_pred HHH-HHHHHHHHHHHHhhh------------------------hHHHHHHHHHHhhhcccchhhH-HHHhhhhccccchh
Q 011783 116 IMG-TASVVIFNTLFGLSV------------------------NFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQA 169 (477)
Q Consensus 116 ~~~-~~~~~i~~~~~~~~~------------------------~~~~l~~~r~l~G~~~g~~~~~-~~~i~~~~~~~~r~ 169 (477)
++- -.+.++..+..+..- +...+...-++.-+-.+..-.+ -.+.-....+++++
T Consensus 74 iiP~Q~l~g~~m~~l~~~i~~~~~~~~~~d~~~~~~~~~~~~~~i~~Lt~~F~~L~fl~ATQDIAVDGWALT~Ls~~n~~ 153 (544)
T PF13000_consen 74 IIPIQYLSGILMLYLSYNISQWLLFDGVDDALLGQGESTVNNITIKFLTWFFFILVFLCATQDIAVDGWALTMLSPENVG 153 (544)
T ss_pred hhHHHHHHHHHHHHHHhccchhhcccccchhhhcCCCCcccccchhHHHHHHHHHHHHHccCCceeehhhhhhcChhhcc
Confidence 553 334444333332211 0112222222333333443333 45555556678877
Q ss_pred hHHHHHHHHhHHHHHHHHhHHHHhhhc--ccc-CCcc---ccccc--ccc-cccch-HHHHHHHHHhhccccccCCCCCC
Q 011783 170 LGLSTVSTAWGIGLIIGPALGGFLAQP--AEK-YPNL---FSSES--LFG-KFPYF-LPCLCISLFAFGETLHRHNDDDD 239 (477)
Q Consensus 170 ~~~~~~~~~~~~g~~~g~~~~~~l~~~--~~~-~~~~---~~~~~--~~~-~~~~~-~~~~~~~~~~l~~~~~~~~~~~~ 239 (477)
.+..-...+.+.|..++..+--.+.+. .+. +|.. .|.-. .|. .+... ++......++-.|.+.....++.
T Consensus 154 ~ASTcqtvG~~~Gyfls~tvFlalns~~f~Nky~r~~p~~~glvtl~~yl~fwg~~~l~~T~~v~~~k~E~~~~~~~~~~ 233 (544)
T PF13000_consen 154 YASTCQTVGQTAGYFLSFTVFLALNSPDFCNKYLRSTPSDEGLVTLSGYLKFWGWVFLIVTILVAFFKKEKPHSESLPKI 233 (544)
T ss_pred hHHHHHHhHhhhhHHHHHHHHHhhCCHHHHHHhcccCCCCCCeeeHHHHHHHHHHHHHHHHHHHheEeecccccccCccc
Confidence 776666666666665554443222211 000 1110 00000 000 00001 11111111222233221111100
Q ss_pred c----cchhhhhhhhhhccch----hhc---ccCCchhhhhhcchhhHHHHHHHHHHHhhhhhhHHHHHHhhcCcccCCc
Q 011783 240 S----CDVSYDALESASAEVK----EEE---GREATPKKSLLKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGG 308 (477)
Q Consensus 240 ~----~~~~~~~~~~~~~~~~----~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (477)
+ .+...++...+.++.+ ++. .+.-....+++|-|++..+++.....-..+.+-.....+=+. +
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Y~~l~~ilkLp~V~~li~ilL~~KigF~a~da~T~LKLl------E 307 (544)
T PF13000_consen 234 EPINKSDGKSKEISIEYDESDVISTEEILSIKDVYKSLWKILKLPNVQTLIIILLTAKIGFQANDAVTSLKLL------E 307 (544)
T ss_pred cccccccccccccceecccccccchhhhhhHHHHHHHHHHHHcCchHHHHHHHHHHHHhccccchhhhHHHHH------H
Confidence 0 0000000000000000 000 111123445677888887777766655444444433333222 2
Q ss_pred cccchhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcc--------------------------hhHHHHHHHHHHHHHHH-
Q 011783 309 LNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGP--------------------------IMVARIAGVLTIPLLTS- 361 (477)
Q Consensus 309 ~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~--------------------------~~~~~~~~~~~~~~~~~- 361 (477)
.|++-+..+++..+..-..++...+++.|..++-.. -+....++..-.+..+.
T Consensus 308 kG~~KE~LAl~~li~~P~qii~~~~~~Kws~g~~P~~~~~~~l~~~~~~~~~~~~l~g~~g~L~~Wl~af~gRL~~a~l~ 387 (544)
T PF13000_consen 308 KGLSKEDLALLVLIDFPFQIILPYYIGKWSAGSPPLDVDNKALPNFSRANKIIRLLVGDAGALRPWLWAFWGRLVAALLA 387 (544)
T ss_pred cCCCHHHhHHHHHHhhhHHHHHHHHhhhhhcCCCccccccccccccccccchhhhhhccchhhHHHHHHHHHHHHHHHHH
Confidence 788888877776655555555555344443332110 01111222211111111
Q ss_pred ---HHHHHHh--hhhhHHHHHHHHHHHHhhhhHHHHhHHHHHHhhcCCcchhhHHhHHHHHHHHHHHHHhhhHHHHHHHH
Q 011783 362 ---YPYIAML--SGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIAMTGMSLFKAAGPAGGGALFSW 436 (477)
Q Consensus 362 ---~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~ 436 (477)
....+.. .....+..++....+..+.....+....+.-+++.+|..-|+.+.+.|++.++|+---..+.=++.|.
T Consensus 388 ~~iV~~fP~~g~v~~~Yf~lvI~~~~l~sf~stvmFVai~AFharISDP~IGGTYMTLLNTvSNLGGtWP~~~vL~lVD~ 467 (544)
T PF13000_consen 388 QLIVYFFPSDGPVPTYYFLLVIIQHVLSSFMSTVMFVAIMAFHARISDPAIGGTYMTLLNTVSNLGGTWPRTFVLWLVDY 467 (544)
T ss_pred HheEEeCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCcccchHHHHHHHHHHhcCCCchHHHHHHHhhh
Confidence 1111111 12234556666677778888888888899999999999999999999999999998777777777776
Q ss_pred h
Q 011783 437 A 437 (477)
Q Consensus 437 ~ 437 (477)
.
T Consensus 468 f 468 (544)
T PF13000_consen 468 F 468 (544)
T ss_pred c
Confidence 5
No 256
>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism]
Probab=98.37 E-value=1.7e-06 Score=79.68 Aligned_cols=127 Identities=13% Similarity=0.004 Sum_probs=98.3
Q ss_pred ccchhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHHHhhhh-hHHHHHHHHHHHHhhhh
Q 011783 310 NYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTIPLLTSYPYIAMLSGF-GLAFLLNCASVVKNLLS 388 (477)
Q Consensus 310 g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 388 (477)
++++...+.+.....++.+++++ +.|++.||+|||+++-..+++++++-+..........+ .....+.+.=++.|++.
T Consensus 80 ~~ps~i~~~Vn~~A~vGti~GQl-~FG~lgD~~GRK~vYG~~liImIi~t~~~~~s~~~~~~~~~m~~L~~~R~~LGiGI 158 (538)
T KOG0252|consen 80 HYPSGVLALVNAAALVGTIFGQL-FFGWLGDKFGRKKVYGKELIIMIICSALSGLSVGTTSPLGVMMTLCFFRFLLGIGI 158 (538)
T ss_pred cCCchHHHHHHHHHHHHHHHHHH-HHHHHHhhhcchhhhhHHHHHHHHHHHHhccCCCCCCCcchhhHHHHHHHHhhccc
Confidence 36677788888999999999999 99999999999999999888888887655444433333 23334444445668888
Q ss_pred HHHHhHHHHHHhhcCCcchhhHHhHHHHHHHHHHHHHhhhHHHHHHHHh
Q 011783 389 VSIITGLFILQNRAVDQDQRGAANGIAMTGMSLFKAAGPAGGGALFSWA 437 (477)
Q Consensus 389 ~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~ 437 (477)
++-+|...+..+|....+.||+-.+....++..|...|..++-.+...+
T Consensus 159 GGDYPlSAtI~SE~an~~~RGa~iaavFa~Qg~GilaG~ivt~Iv~~~f 207 (538)
T KOG0252|consen 159 GGDYPLSATIMSESANKKTRGAFIAAVFAMQGFGILAGGIVALIVSAIF 207 (538)
T ss_pred cCCCcchHHHhhhhhhhccccceeEEEEEecchhHhhccHHHHHHHHHH
Confidence 9999999999999999999999999888887777766666555555444
No 257
>KOG3810 consensus Micronutrient transporters (folate transporter family) [Coenzyme transport and metabolism]
Probab=98.34 E-value=1.4e-05 Score=70.95 Aligned_cols=358 Identities=13% Similarity=0.030 Sum_probs=196.3
Q ss_pred HHHHHHHhhhhhhhhhhcCCchhhHHHHHHHHHHHHHHHhhhhHHHHHHHHHHhhhcccchhhHHHHhhhhccccchhhH
Q 011783 92 MFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGPIKAYACEIFREEHQALG 171 (477)
Q Consensus 92 ~~~~~~~~~~~G~l~Dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~i~~~~~~~~r~~~ 171 (477)
.-.+.+.-.+.=.+.|..-.|++++.-.+.......+..+.++.+.+=+.-++.|...+.-..-++++-+.++++++.++
T Consensus 52 TYSYLv~LvpvFlLTD~lrYKPvivlq~ls~v~~w~~lv~g~sV~~mQvlE~FyG~~tAaEIAYysYIYs~Vd~~~Yqrv 131 (433)
T KOG3810|consen 52 TYSYLVGLVPVFLLTDYLRYKPVVVLQALSGVPVWIMLVFGPSVKAMQVLEFFYGPATAAEIAYYSYIYSKVDPEMYKRV 131 (433)
T ss_pred hHHHHHHHHHHHHHhhhhhcceeeeeeccchhHHHHHHHhcCCchheeeehhhcChHHHHHHhhhheeeeecCHHHHHHH
Confidence 33445555666678999999999999988888888899999999999999998888766655558899999999999999
Q ss_pred HHHHHHHhHHHHHHHHhHHHHhhhccccCCcccccccccccccch-HHHHHHHHHhhccccccCCCCCCccchhhhhhhh
Q 011783 172 LSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSESLFGKFPYF-LPCLCISLFAFGETLHRHNDDDDSCDVSYDALES 250 (477)
Q Consensus 172 ~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 250 (477)
.+...++.-.|-..|..++-.+.... |-..+.... .... ..+.....+++|..++..-.++++.+....+.++
T Consensus 132 t~y~RaA~L~g~~~g~vlaQlLvs~~--~~sy~~LN~----ISL~~~~ia~~~A~fLP~v~rSl~f~~~~~~~~v~~~e~ 205 (433)
T KOG3810|consen 132 TGYCRAAFLVGKFVGSVLAQLLVSLE--TLSYTTLNY----ISLAEVTIAVLLALFLPRVKRSLYFHRLEDKISVGDLEE 205 (433)
T ss_pred HHHhHHHHHHHhHHHhHHHHHHhhhc--ccchhhhch----hhHHHHHHHHHHHhhCCCCchhhhhhcccccceeccchh
Confidence 99999999999999999988887622 111111111 1111 1222333345554332111111111110011111
Q ss_pred hhccch--h----hcccCCchhhhhhcchhhHHHHHHHHHHHhhhhhhHHHHHHhhcCcccCCccccchhhhHHHHHHHH
Q 011783 251 ASAEVK--E----EEGREATPKKSLLKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITG 324 (477)
Q Consensus 251 ~~~~~~--~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~ 324 (477)
...+.+ + ..........+..+||.+..-.+-+.+..+......++....-.... -+-...-.|..-++..
T Consensus 206 ~~~~~~~~~~l~~~~~~l~~~l~~~y~np~ll~WSlWwAl~scg~~QV~nY~Q~LW~~~~----~~~~~vyNG~veAv~t 281 (433)
T KOG3810|consen 206 MNPQASYMSYLRGAFVLLWRDLQECYSNPRLLKWSLWWALASCGYYQVTNYTQILWKEVA----PNPANVYNGAVEAVST 281 (433)
T ss_pred cCccchhhHHHHHHHHHHHHHHHHHhcCchhhhhHHHHHHhhchhHHHHHHHHHHHHhhC----CCchhhhcCHHHHHHH
Confidence 111000 0 00111123444556776665555555555444444433332222110 1112223456666666
Q ss_pred HHHHHHHHHHHHHHHHhhcchhHHH--HHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhhhhHHHHhHHHHHHhhc
Q 011783 325 FSLLVFQLSLYPFLERILGPIMVAR--IAGVLTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRA 402 (477)
Q Consensus 325 ~~~~~~~~~~~~~l~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 402 (477)
+.+.+..+ ..|.+.-++.|..-+. .+.+..+...+.+..... .| +......+.........+.....+++.
T Consensus 282 lLGa~~~~-~~g~l~i~w~r~g~~ll~~~s~~~agllf~m~~t~~-----Iw-~~Ya~yvlfr~~y~l~itiA~~~iA~n 354 (433)
T KOG3810|consen 282 LLGAIAAL-AAGYLNINWNRWGDLLLAVGSAVQAGLLFIMAQTQH-----IW-VCYAGYVLFRVIYQLTITIATFQIARN 354 (433)
T ss_pred HHHHHHHH-HHHheeeccchhhHHHHHHHHHHhhhhhhhhhcccc-----ee-hhhhhHHHHHhhHhhhhhHHHHHHHHh
Confidence 77777777 7777766555553333 333332222222222221 22 333333333333344445555556666
Q ss_pred CCcchhhHHhHHHHHHHHHHHHHhhhHHHHHHHHhhhhccc-cCCCCchHHHHHHHHHHHHHHHHHhh
Q 011783 403 VDQDQRGAANGIAMTGMSLFKAAGPAGGGALFSWAQKRLDA-SFLPGSQMVFFVLNVVEAIGVLMTFK 469 (477)
Q Consensus 403 ~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~ 469 (477)
.+.|.-|...|+..++.-+-+.+-..+ +.|..+...+. ...--|..-|++.+++.+++..+...
T Consensus 355 L~~e~~gLvFGiNTFvAl~lQsilT~i---Vvd~~g~~L~ir~Q~~~Y~~Yf~v~~~i~~~~~~~~~~ 419 (433)
T KOG3810|consen 355 LSSELFGLVFGINTFVALILQSILTLI---VVDDRGLGLDIRTQFVVYSSYFIVLGVIFLIGFGIEYL 419 (433)
T ss_pred hhhhhheeeeehHHHHHHHHHHhheEE---EEcccccCCCcceeEEEEeehHHHHHHHHHHHHHHHHH
Confidence 788899999999877665555444443 33422211111 11113455677788888887665444
No 258
>PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.; GO: 0005471 ATP:ADP antiporter activity, 0005524 ATP binding, 0006810 transport, 0016021 integral to membrane
Probab=98.27 E-value=0.002 Score=62.23 Aligned_cols=297 Identities=13% Similarity=0.129 Sum_probs=153.8
Q ss_pred CchhHHHHHHHHHHHhhhchhchHhHHHHHHHHhcc---cccchhhhhhhHHHHHHHHH-HHHHHhhhhhhhhhhcCCch
Q 011783 38 LPITELFSIWIIVLCTALPISSLFPFLYFMIKDFQI---AKREEDIGSYAGYVGSSFMF-GRALTSVFWGLVADRYGRKP 113 (477)
Q Consensus 38 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---s~~~~~~~~~~g~~~s~~~~-~~~~~~~~~G~l~Dr~Grr~ 113 (477)
..++++..+.+..|+..+.++..- .+.+.+=+ +++. +..+=....+ ...+......+++||++|.+
T Consensus 21 ~E~~k~~~l~~m~f~i~f~y~~lR----~~KD~lvvt~~gae~------I~flK~~~vlP~a~~f~~~y~kl~n~~s~~~ 90 (491)
T PF03219_consen 21 SELKKFLPLALMFFFILFNYTILR----DLKDTLVVTAQGAEV------IPFLKVWGVLPVAILFTILYSKLSNRLSREK 90 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH----HhcCeEEEecCChhH------HHHHHHHHHHHHHHHHHHHHHHHHhcCCHHH
Confidence 335566666666666555544332 22222222 2222 4555444444 34555778999999999999
Q ss_pred hhHHHHHHHHHHHHHHHhh--h-----------------------------hHHHHHHHHHHhhhcccc-hhhH-HHHhh
Q 011783 114 VIIMGTASVVIFNTLFGLS--V-----------------------------NFWMAVLTRFLLGSLNGL-LGPI-KAYAC 160 (477)
Q Consensus 114 ~~~~~~~~~~i~~~~~~~~--~-----------------------------~~~~l~~~r~l~G~~~g~-~~~~-~~~i~ 160 (477)
++-+....+.....++++. | +.|.+.+.....-+-+.. .... ..+..
T Consensus 91 lFy~~~~~F~~fF~~f~~vlyP~~~~lhp~~~~~~~~~~~~~~~~~~i~~~~~Wt~slfYv~aElwgsvvlSlLFW~fAN 170 (491)
T PF03219_consen 91 LFYIIIIPFLGFFALFAFVLYPNRDILHPDAFADKLLAILPPGFKGFIAMFRNWTFSLFYVMAELWGSVVLSLLFWGFAN 170 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhchhhcCCCHHHHHhhhhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9887777776666655542 1 123333333333343333 3335 78889
Q ss_pred hhccccchhhHHHHHHHHhHHHHHHHHhHHHHhhh-ccccCCc-ccccccccccccchHHHHH-HHHHhhc-cccccCCC
Q 011783 161 EIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQ-PAEKYPN-LFSSESLFGKFPYFLPCLC-ISLFAFG-ETLHRHND 236 (477)
Q Consensus 161 ~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~-~~~~~~~-~~~~~~~~~~~~~~~~~~~-~~~~~l~-~~~~~~~~ 236 (477)
|.++.+|-.+..++++.+.++|.+++..+..++.+ .....+. .-.|.... .....+.... ..+..+. ...+....
T Consensus 171 ~itt~~eAKRfYpl~g~ganigli~sG~~~~~~~~~~~~~~~~~~~~~~~~l-~~l~~~v~~~g~~i~~~~~~~~~~vl~ 249 (491)
T PF03219_consen 171 EITTVEEAKRFYPLFGLGANIGLIFSGQLTSYFSSFLRKSLPAGVDAWELSL-NSLMGIVLILGIVIILLYRYMNKNVLT 249 (491)
T ss_pred hcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccccccHhHHH-HHHHHHHHHHHHHHHHHHHHHHHHccC
Confidence 99999999999999999999999999888888876 1110000 11121111 0001111111 1111111 00000000
Q ss_pred CCCccchhhhhhhhhhccchhhcccCCchhhhhhcchhhHHHHHHHHHHHhhhhhhHHHHHHhhcCcccCCccccchhhh
Q 011783 237 DDDSCDVSYDALESASAEVKEEEGREATPKKSLLKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMV 316 (477)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 316 (477)
+++..+. ...++.++.+....++.+.++|+|.+..+.+...++..........+-......+. +...++. -.
T Consensus 250 ~~~~~~~------~~~~kk~k~k~s~~es~k~l~kS~yL~~Ia~lvi~Ygi~inLvE~~wK~~lk~~~~-~~~~ysa-fm 321 (491)
T PF03219_consen 250 DPRFYPS------AKKKKKKKPKMSLKESFKLLLKSKYLLCIALLVIAYGISINLVEVVWKSQLKQLYP-DPNDYSA-FM 321 (491)
T ss_pred ccccchh------hhcccccCCCccHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC-CchHHHH-HH
Confidence 0000000 00000011122334567788899988887777776655544444333333222110 1111111 23
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHH
Q 011783 317 GEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVL 354 (477)
Q Consensus 317 g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 354 (477)
|-.....++..++..+ +++.+.+|+|-+....+.-++
T Consensus 322 G~~~~~tGivtii~~~-l~~~iir~~GW~~~AlitPiv 358 (491)
T PF03219_consen 322 GKFSSWTGIVTIIMMF-LSSNIIRRFGWRTAALITPIV 358 (491)
T ss_pred HHHHHHHHHHHHHHHH-HHHHHHHHhhHHHHHHHhHHH
Confidence 5555666777777775 888999998876665554333
No 259
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=98.25 E-value=3.8e-09 Score=103.04 Aligned_cols=132 Identities=20% Similarity=0.302 Sum_probs=87.6
Q ss_pred chhchHhHHHHHHHHhcccccchhhhhhhHHHHHHHHHHHHHHhhhhhhhhhhcCCchhhHHHHHHHHHHHHHHH--h--
Q 011783 56 PISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFG--L-- 131 (477)
Q Consensus 56 ~~~~~~~~~~~~~~~~~~s~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~Grr~~~~~~~~~~~i~~~~~~--~-- 131 (477)
+........+.+.++.+.+... ....+.. +...++.+....+.||+|||++++.+..+.+++.+..+ .
T Consensus 268 g~~~~~~~~~~i~~~~~~~~~~-----~~~~~~~---~~~~~~~~~~~~~~~~~GRr~~~i~~~~~~~~~~~~~~~~~~~ 339 (451)
T PF00083_consen 268 GINFIFYYSPSIFENAGISNSF-----LATLILG---LVNFLGTLLAIFLIDRFGRRKLLIIGLLLMAICSLILGIIFFL 339 (451)
T ss_pred cccccccccccccccccccccc-----ccccccc---ccccccccccccccccccccccccccccccccccccccccccc
Confidence 3344445556777777776652 0233222 33455666777999999999999999998888877664 1
Q ss_pred -hhh-----HHHHHHHHHHhhhcccchhhH-HHHhhhhccccchhhHHHHHHHHhHHHHHHHHhHHHHhhh
Q 011783 132 -SVN-----FWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQ 195 (477)
Q Consensus 132 -~~~-----~~~l~~~r~l~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~ 195 (477)
.++ ...+...............+. ..+.+|.+|.+.|.++.++......++..+++.+...+.+
T Consensus 340 ~~~~~~~~~~~~i~~~~l~~~~~~~g~~~~~~~~~~ElfPt~~R~~~~~~~~~~~~i~~~i~~~~~~~~~~ 410 (451)
T PF00083_consen 340 GVSSSSWWSILSIVFLALFFAFFSLGWGPLPWIYTAELFPTKVRSTGIGLSYAVGRIGGFIIPFLFPYLFN 410 (451)
T ss_pred ccccccccccccceeeeeccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 111 122222221111222234455 6888999999999999999999888988888888777765
No 260
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins.
Probab=98.23 E-value=3.4e-05 Score=67.20 Aligned_cols=127 Identities=17% Similarity=0.047 Sum_probs=89.9
Q ss_pred cCCccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHHHhhh--hhHHHHHHHHHH
Q 011783 305 KLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTIPLLTSYPYIAMLSG--FGLAFLLNCASV 382 (477)
Q Consensus 305 ~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~ 382 (477)
..+.+|+|..+...+-....++..++ + ..|.+.|+.|++..+.+|.+...++...+.......- ...|. +.+...
T Consensus 28 Lk~~l~~sq~~l~~l~~~~~~G~~~G-~-~~G~l~d~~gp~~~l~iG~~~~~~GY~~~~l~~~~~i~~~~~~~-~~~~~~ 104 (250)
T PF06813_consen 28 LKSRLGYSQSQLNTLSTAGDIGSYFG-I-LAGLLYDRFGPWVVLLIGAVLGFVGYGLLWLAVSGRIPSLPVWL-MCLFLF 104 (250)
T ss_pred HHHHhCCCHHHHHHHHHHHHHHhhcc-H-HHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHhCccCccchHH-HHHHHH
Confidence 34559999999999998888888775 5 7899999999999999999999999876655544322 22232 233333
Q ss_pred HHhhhhHHHHhHHHHHHhhcCCcchhhHHhHHHHHHHHHHHHHhhhHHHHHHH
Q 011783 383 VKNLLSVSIITGLFILQNRAVDQDQRGAANGIAMTGMSLFKAAGPAGGGALFS 435 (477)
Q Consensus 383 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~ 435 (477)
+.+.+.............+.+| ++||++.|+.-....+++++-..+...+++
T Consensus 105 l~~~s~~~~~ta~lvt~~~NFP-~~RG~vvgilk~~~GLSaai~t~i~~~~f~ 156 (250)
T PF06813_consen 105 LGGNSSCWFNTASLVTCVRNFP-RSRGTVVGILKGFFGLSAAIFTQIYSAFFG 156 (250)
T ss_pred HHcccHHHhhhHHHHHHHHhCc-cccCceehhhhHHHHhHHHHHHHHHHHHcC
Confidence 3333334444454455556788 579999999999988888877776555543
No 261
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function.
Probab=98.20 E-value=0.00063 Score=61.72 Aligned_cols=145 Identities=12% Similarity=0.059 Sum_probs=95.8
Q ss_pred cccchhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhhhh
Q 011783 309 LNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNLLS 388 (477)
Q Consensus 309 ~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 388 (477)
+|++..+++.++........+.+. +.|.+.||+|||+..+...++..+.++.-.. + ....+.+.=++.|+..
T Consensus 64 yg~~~~qIa~Lf~~Gf~Ss~i~g~-~~G~laD~~Grk~~cl~~cily~~scl~k~~-~------~~~~L~~GRvlgGiaT 135 (354)
T PF05631_consen 64 YGFSEHQIAILFVAGFASSAIFGT-FVGSLADRYGRKKACLLFCILYSLSCLTKHS-S------NYPVLLLGRVLGGIAT 135 (354)
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHH-HHHHHHHhcCchHHHHHHHHHHHHHHHHHhc-c------ccHHHHHHHHHHHHHH
Confidence 899999999999998888888888 8899999999999988888877777753221 1 1224555556666666
Q ss_pred HHHHhHHHHHH-h----hcCCcchhhHHhHHHHHH-HHHHHHHhhhHHHHHHHHhhhhccccCCCCchHHHHHHHHHHHH
Q 011783 389 VSIITGLFILQ-N----RAVDQDQRGAANGIAMTG-MSLFKAAGPAGGGALFSWAQKRLDASFLPGSQMVFFVLNVVEAI 462 (477)
Q Consensus 389 ~~~~~~~~~~~-~----~~~~~~~~g~~~g~~~~~-~~~g~~~~~~~~g~l~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 462 (477)
...+...-+.. . +-+|++..+...+..... +.+-++.+..++..+.++.+. |...+|.....+.++
T Consensus 136 SLLfS~FEsW~V~Eh~~~g~~~~~L~~tF~~~tf~~n~~vAI~aGv~a~~l~~~~~~--------g~vaPF~~a~~~l~~ 207 (354)
T PF05631_consen 136 SLLFSAFESWMVHEHNKRGFPQEWLSDTFSLATFFGNGVVAIGAGVVANVLADWFGF--------GPVAPFDAAIVLLAV 207 (354)
T ss_pred HHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHhHHHHHHHhHHHHHHHHHhCC--------CCcchHHHHHHHHHH
Confidence 66666665543 2 245666666655554422 333344444444444444311 346788888888888
Q ss_pred HHHHHhh
Q 011783 463 GVLMTFK 469 (477)
Q Consensus 463 ~~~~~~~ 469 (477)
+.+++..
T Consensus 208 ~~~~I~~ 214 (354)
T PF05631_consen 208 AAVLILK 214 (354)
T ss_pred HHHHHHh
Confidence 8777654
No 262
>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only]
Probab=98.18 E-value=0.00013 Score=70.10 Aligned_cols=132 Identities=18% Similarity=0.191 Sum_probs=102.5
Q ss_pred HHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhhhhHHHHhHHHHHHhhc
Q 011783 323 TGFSLLVFQLSLYPFLERILGPIMVARIAGVLTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRA 402 (477)
Q Consensus 323 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 402 (477)
.++...+.+. ..|.++||+|||..+........+..+...+.. .| .+....+ .++.........+++++.
T Consensus 71 ~~~~~~i~s~-~iG~lSD~~grk~~L~~~~~~~~l~~~~~~~~~------~~-~~~~~~l--~g~~~~~~s~~~a~vadi 140 (463)
T KOG2816|consen 71 AGLLTLISSP-LIGALSDRYGRKVVLLLPLFGTILPALCLLFQG------YW-FFLLLGL--SGGFSAIFSVGFAYVADI 140 (463)
T ss_pred hHHHHHHHHh-hhHHhhhhhhhhhhHHHHHHHHHHhHHHHHHHH------HH-Hhhhccc--ccchhhhhhhhhhheeec
Confidence 3666777777 789999999999999988887777766655544 12 2222222 234456667778899999
Q ss_pred CCcchhhHHhHHHHHHHHHHHHHhhhHHHHHHHHhhhhccccCCCCchHHHHHHHHHHHHHHHHHhhhhhhcc
Q 011783 403 VDQDQRGAANGIAMTGMSLFKAAGPAGGGALFSWAQKRLDASFLPGSQMVFFVLNVVEAIGVLMTFKPFLAQR 475 (477)
Q Consensus 403 ~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 475 (477)
...+.|....|+.+.....+..++|.+.+.+.+.. |+..+|.+..+..+++.+.... .+||+
T Consensus 141 s~~~~R~~~~gll~~~~~~~~~~~p~~~~~~~~~~----------~~a~~f~ia~~~~~~~~~y~~~-~l~Es 202 (463)
T KOG2816|consen 141 SSEEERSSSIGLLSGTFGAGLVIGPALGGYLVKFL----------GIALVFLIAAASGILSLLYMLL-FLPES 202 (463)
T ss_pred cchhHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhc----------CchHHHHHHHHHHHHHHHHHhh-ccccc
Confidence 99999999999999999999999999999999887 8888999998888888777665 56664
No 263
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=98.12 E-value=0.00014 Score=73.05 Aligned_cols=170 Identities=9% Similarity=-0.032 Sum_probs=114.9
Q ss_pred hhHHHHHHhhcCcccCCccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHh-hcchhHHHHHHHHHHHHHHHHHHHHHhh
Q 011783 291 AYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERI-LGPIMVARIAGVLTIPLLTSYPYIAMLS 369 (477)
Q Consensus 291 ~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 369 (477)
+....+..|+... +|++...+..+........-+... +++++.|+ +|+++.+..+.++..++..++.......
T Consensus 5 Gm~aiLvlYl~~~-----lg~~~~~A~~i~~~f~~l~yl~pi-lGg~iAD~~lG~~~tIl~~~ii~~lG~~llai~a~~~ 78 (654)
T TIGR00926 5 GMRTILVLYFLNF-----LGFSESTSTVLFHTFTYLCYLTPL-IGAIIADGWLGKFKTILYLSIVYVVGHALLSFGAIPS 78 (654)
T ss_pred ecHHHHHHHHHHH-----cCCcHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhccCcc
Confidence 3444555555543 788888777776666655556555 77787776 6899999999988888877665532211
Q ss_pred h--hhHHHHHHHHHHHHhhhhHHHHhHHHHHHhhcCCcc---hhhHHhHHHHHHHHHHHHHhhhHHHHHHHHhhhhcccc
Q 011783 370 G--FGLAFLLNCASVVKNLLSVSIITGLFILQNRAVDQD---QRGAANGIAMTGMSLFKAAGPAGGGALFSWAQKRLDAS 444 (477)
Q Consensus 370 ~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~ 444 (477)
. .......+....+..++.++.-|...+...+.++++ .+-+...++....++|+.+++.+.+++.+........
T Consensus 79 ~~~~~~~~~~l~gLaLia~G~GgiKp~vsaf~gdqf~~~~~~~~~s~F~~fY~~iNiGSlis~~i~~~l~~~~~~fg~~- 157 (654)
T TIGR00926 79 SGHPLHDLLDLLGLALIALGTGGIKPCVSAFGGDQFEERQLSLRSRFFSFFYFAINAGSLISTIITPILRGDVGCFGCQ- 157 (654)
T ss_pred cccchHHHHHHHHHHHHHhhccccccCchhhhHhhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccC-
Confidence 1 112223344455556777788888888888877654 4667788888888999999999988887543211000
Q ss_pred CCCCchHHHHHHHHHHHHHHHHHhh
Q 011783 445 FLPGSQMVFFVLNVVEAIGVLMTFK 469 (477)
Q Consensus 445 ~~~g~~~~~~~~~~~~~~~~~~~~~ 469 (477)
.+|...|.+.+++.+++.++...
T Consensus 158 --~~~~~aF~i~~i~m~ia~lvf~~ 180 (654)
T TIGR00926 158 --DCYPLAFGVPAILMILALIVFMA 180 (654)
T ss_pred --cchHHHHHHHHHHHHHHHHHHHH
Confidence 16888999988888888776654
No 264
>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=98.02 E-value=7.9e-05 Score=68.94 Aligned_cols=127 Identities=14% Similarity=-0.061 Sum_probs=87.0
Q ss_pred cccchhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHHHhhhhhHHH--HHHHHHHHHhh
Q 011783 309 LNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTIPLLTSYPYIAMLSGFGLAF--LLNCASVVKNL 386 (477)
Q Consensus 309 ~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~ 386 (477)
|| +...+-+...++.+..+...+ .+-|+.|++|-|..+.++....+++..+=.......-..... +......+.+.
T Consensus 75 Yg-s~~~~~wlsmIym~v~vp~gf-~~mw~ldk~GLR~a~llgt~ln~iGa~Ir~iss~p~v~~~f~~~l~~~Gq~iaa~ 152 (480)
T KOG2563|consen 75 YG-SSSAADWLSMIYMVVSVPFGF-AAMWILDKFGLRTALLLGTVLNGIGAWIRLISSLPFVPPLFRRPLTHTGQSIAAA 152 (480)
T ss_pred hc-chHHHHHHHHHHHHHHHHHhh-HHHHhhcccchHHHHHHHHHHHHHHHHHhhhccCccccccchhhhhHHhHHHHHH
Confidence 56 566666777788888888877 889999999999999999998888876544433321111111 22233333223
Q ss_pred hhHHHHhHHHHHHhhcCCcchhhHHhHHHHHHHHHHHHHhhhHHHHHHHHh
Q 011783 387 LSVSIITGLFILQNRAVDQDQRGAANGIAMTGMSLFKAAGPAGGGALFSWA 437 (477)
Q Consensus 387 ~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~ 437 (477)
........-.-.....+|+++|+++..+..+.+.+|.+++..+...+..+.
T Consensus 153 Aq~Fim~lPskiA~~WF~~~qra~A~~~~v~~n~LGvavg~llppilV~~~ 203 (480)
T KOG2563|consen 153 AQPFILGLPSKIAAVWFPPDQRAIATVLGVMGNPLGVAVGFLLPPILVPSS 203 (480)
T ss_pred hhhHhhccccHHHHhhCCcchhhhhhhHHHhcchHHHHHHhhccceecCCC
Confidence 332222222234455789999999999999999999999999888888766
No 265
>KOG1479 consensus Nucleoside transporter [Nucleotide transport and metabolism]
Probab=97.89 E-value=0.0039 Score=57.80 Aligned_cols=122 Identities=14% Similarity=0.129 Sum_probs=63.5
Q ss_pred hHHHHHHHHHHHhhhchhchHhHHHHHHHHhcccccchhhhhhhHHHHHHHHHHHHHHhhhhhhhhhhcCCchhhHHHHH
Q 011783 41 TELFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTA 120 (477)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~Grr~~~~~~~~ 120 (477)
...++.++..+-......+.....+++.+++...+.+ ............+...+....--.+.-|. |+++.....+
T Consensus 18 ~v~~i~~llGiG~LlpWN~fiTa~~y~~~~~~~~~~~---~~F~~~~~~~a~i~~ll~~~~n~~~~~~~-~~~~~~~l~~ 93 (406)
T KOG1479|consen 18 LVYLIFLLLGIGTLLPWNMFITASDYYYYRFPGYHNS---KNFTSSYTLAAQIPLLLFNLLNAFLNTRL-RTRVGYLLSL 93 (406)
T ss_pred cHHHHHHHHhcccccchHhhhccHHHHHhhcCCCchH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHH
Confidence 3444555555666667777888888888887655443 11133334444444555555555555562 2222111111
Q ss_pred HHHHHHHHHHhh---------hhHHHHHHHHHHhhhcccchhhH-HHHhhhhccccc
Q 011783 121 SVVIFNTLFGLS---------VNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEH 167 (477)
Q Consensus 121 ~~~i~~~~~~~~---------~~~~~l~~~r~l~G~~~g~~~~~-~~~i~~~~~~~~ 167 (477)
...+..+.+.++ ..+...++.-.+.+.+.|...-. ....++ +|+|.
T Consensus 94 ~~il~i~~l~~~~v~~~~~~~~ff~vt~~~vv~~~~a~a~~qgs~~G~a~~-~P~~y 149 (406)
T KOG1479|consen 94 IAILFIVTLDLALVKTDTWTNGFFLVTLIIVVLLNLANAVVQGSLYGLAGL-FPSEY 149 (406)
T ss_pred HHHHHHHHHHHHhhccCCccchhHHHHHHHHHHHhhhhhhhccchhhhhhc-CCHHH
Confidence 111112222221 24566667777788888877666 555555 45444
No 266
>PF12832 MFS_1_like: MFS_1 like family
Probab=97.87 E-value=0.00021 Score=49.73 Aligned_cols=70 Identities=17% Similarity=0.220 Sum_probs=57.3
Q ss_pred HHHHHHHHHhhhhhhHHHHHHhhcCcccCCccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHH
Q 011783 278 SIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVL 354 (477)
Q Consensus 278 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 354 (477)
.-..+++++....+...+++.|..+ .|+|+.++|++.++..+..+++.+ +.+++.||.++++........
T Consensus 5 lk~~yf~~f~~~g~~~Pfl~~~~~~------~Gl~~~~iGil~~i~~~~~~~~~p-l~g~laDk~~~~~~~l~~~~~ 74 (77)
T PF12832_consen 5 LKAFYFFYFAALGCLYPFLPLYLKQ------LGLSPSQIGILSAIRPLIRFLAPP-LWGFLADKFGKRKVILLGSLF 74 (77)
T ss_pred HHHHHHHHHHHHHHHHhhhhHhhhh------cCCCHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHCccHHHHHHHHH
Confidence 3456666666777777778877765 799999999999999999999999 899999999988877665543
No 267
>COG3202 ATP/ADP translocase [Energy production and conversion]
Probab=97.85 E-value=0.028 Score=53.26 Aligned_cols=299 Identities=12% Similarity=0.135 Sum_probs=158.6
Q ss_pred chhHHHHHHHHHHHhhhchhchHhHHHHHHHHhcccccchhhhhhhHHHHHHHHH-HHHHHhhhhhhhhhhcCCchhhHH
Q 011783 39 PITELFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMF-GRALTSVFWGLVADRYGRKPVIIM 117 (477)
Q Consensus 39 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~g~~~s~~~~-~~~~~~~~~G~l~Dr~Grr~~~~~ 117 (477)
.++.+..+.+..++..+.+ ..+-.+.+.+-++....+. +.++-+...+ +..+..++.+++.+++.|.+++-+
T Consensus 25 E~~kflpl~Ll~f~I~~ny----~~lR~lKDslvv~~~gae~---I~FlK~~~vlP~avif~~iy~kl~~~lt~~~vF~~ 97 (509)
T COG3202 25 ELKKFLPLALLFFCILFNY----NLLRSLKDSLVVTRQGAES---ISFLKTWGVLPSAVIFTIIYQKLLNILTREKVFYI 97 (509)
T ss_pred HHHHHHHHHHHHHHHHHHH----HHHHHhhhheEeecCcchh---hHHHHHHHhchHHHHHHHHHHHHHhhcCHHHHHHH
Confidence 3455555555555544443 3444556666655332111 7777777777 677888999999999999999888
Q ss_pred HHHHHHHHHHHHHhhh---------h-----------------------HHHHHHHHHHhhhcccc-hhhH-HHHhhhhc
Q 011783 118 GTASVVIFNTLFGLSV---------N-----------------------FWMAVLTRFLLGSLNGL-LGPI-KAYACEIF 163 (477)
Q Consensus 118 ~~~~~~i~~~~~~~~~---------~-----------------------~~~l~~~r~l~G~~~g~-~~~~-~~~i~~~~ 163 (477)
-+..+....+++++.- + .|...+...+.-+-... ..-. .....|.+
T Consensus 98 ~~~~F~~fF~LFa~Vi~P~~~~~hp~~~~~~~~~~~~p~~l~~~ili~~~Ws~s~~Yi~aELWgslV~S~lFw~faNeit 177 (509)
T COG3202 98 ILGFFLGFFALFAFVIYPYKDILHPDPEFSRDLFADLPMFLKWFILIVGEWSYSLFYIMAELWGSLVLSLLFWQFANEIT 177 (509)
T ss_pred HHHHHHHHHHHHHHHHhccccccCCCHHHHHHHHhhCCccceeeeEeecchHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 8888877777776531 1 12333333333332233 2224 66788999
Q ss_pred cccchhhHHHHHHHHhHHHHHHHHhHHHHhhhccccCCcccccccccccccchHHHHH-HHHHhhc---cccccCCCCCC
Q 011783 164 REEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSESLFGKFPYFLPCLC-ISLFAFG---ETLHRHNDDDD 239 (477)
Q Consensus 164 ~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~---~~~~~~~~~~~ 239 (477)
..+|-.|.+++++...+++..++..+..++.++...+...+-- ..+ ...+.+.... .....+. |....+++..
T Consensus 178 t~~eakRFy~lf~l~~ni~lllsg~~~~~~~k~~~~~~~~~~~-~~~-~~~~~vi~~~~~i~~~l~~~~~r~il~~~~f- 254 (509)
T COG3202 178 TIEEAKRFYPLFGLGANISLLLSGEVTSWLSKHRDALASEFKD-LLL-QILFIVIVILGIIAILLYRYINRNVLTDPLF- 254 (509)
T ss_pred hHHHhhhhHHHHHHHHHHHHHHHHHHHHHHhhchhhHhHHHHH-HHH-HHHHHHHHHHHHHHHHHHHHHHhhcccCcch-
Confidence 9999999999999999999999988888887633221111100 000 0001111111 1111111 1100000000
Q ss_pred ccchhhhhhhhhhccchhhcccCCchhhhhhcchhhHHHHHHHHHHHhhhhhhHHHHHHhhcCcccCCccccch---hhh
Q 011783 240 SCDVSYDALESASAEVKEEEGREATPKKSLLKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYST---QMV 316 (477)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~---~~~ 316 (477)
..+ ....++.++.+....++.+.+.|+|.+....+...+++.....+.. .|-... .+.+..+. .-.
T Consensus 255 ~~~------~~~kk~~~k~k~~~~~s~k~i~~SkyL~~ial~vl~Y~v~inLvE~---~wKs~i--k~~~~~~~~~~~f~ 323 (509)
T COG3202 255 YLR------AKKKKKKKKLKLGLIESFKMILRSKYLGAIALLVLAYGVSINLVEG---VWKSGI--KELYPTTNEYTAFM 323 (509)
T ss_pred hHH------HhcccccccccCcHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHH---HHHHhH--HHhcCChhHHHHHH
Confidence 000 0000000111222334667788888888777666666544333322 222211 11111111 223
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHH
Q 011783 317 GEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTIPL 358 (477)
Q Consensus 317 g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 358 (477)
|.+....++..++.....++.+.+|.|=.....+.-++..+.
T Consensus 324 ~~~~~~tgvv~~v~~~~~~s~~ir~~GW~~~AlitPiv~lit 365 (509)
T COG3202 324 GRFQIWTGVVSLVVFLFPGSNLIRRVGWFTGALITPLVMLIT 365 (509)
T ss_pred HHHHHHHHHHHHHHHHhhhHHHHHHhhHHHHHHHHHHHHHHH
Confidence 444555666655555657888888888666555554444444
No 268
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT).
Probab=97.80 E-value=0.0074 Score=57.97 Aligned_cols=51 Identities=16% Similarity=0.055 Sum_probs=39.2
Q ss_pred HHHHHHhhhhHHHHhHHHHHHhhcCCcchhhHHhHHHHHHHHHHHHHhhhH
Q 011783 379 CASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIAMTGMSLFKAAGPAG 429 (477)
Q Consensus 379 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~ 429 (477)
+..++.++..+-.......+..+.+++++|..+..+....-.+|-.+|..+
T Consensus 377 ~~~~l~gltnGy~~s~~m~~~p~~v~~~e~e~aG~~~~~~l~~Gl~~Gs~l 427 (437)
T TIGR00939 377 ILMLLFGFSNGYLGSLSMCLAPRQVDPHEREVAGALMVIFLLVGLALGAVL 427 (437)
T ss_pred HHHHHHHHhhhHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 334445667777777777788888999999998888888888888877765
No 269
>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only]
Probab=97.80 E-value=0.0005 Score=65.42 Aligned_cols=158 Identities=15% Similarity=0.114 Sum_probs=110.1
Q ss_pred cccchhhhHHHHHHHHHHHHHHHHHHHHHHHHhhc-chhHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhhh
Q 011783 309 LNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILG-PIMVARIAGVLTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNLL 387 (477)
Q Consensus 309 ~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 387 (477)
.+-+.+..|+..+...++..++++ ..++...|.+ -|+.+..+.+++.++.+++......+....+ +++++=++.|+
T Consensus 66 ~~A~~~ffG~viaa~slg~~i~~l-iF~~Ws~k~~~~k~Pli~s~ii~~~g~llY~~l~~~~~~~~y-~mL~~R~l~Gv- 142 (488)
T KOG2325|consen 66 PTATATFFGLVIAASSLGHAIFSL-IFGIWSNKTGSVKKPLIVSFLIAIIGNLLYLALAYVPNGVKY-LMLVARILTGV- 142 (488)
T ss_pred CCCCcchhhHHHHHHHHHHHhcch-hhcccccccCCcccCHHHHHHHHHHHHHHHHHHHhcccchHH-HHHHHHHHcCc-
Confidence 566777889999999999999999 5666666655 4888899999999998888555544432222 33333343333
Q ss_pred hHHHHhHHHHHHhhcCCcchhhHHhHHHHHHHHHHHHHhhhHHHHHHHHhhhh---ccccCCCCchHHHHHHHHHHHHHH
Q 011783 388 SVSIITGLFILQNRAVDQDQRGAANGIAMTGMSLFKAAGPAGGGALFSWAQKR---LDASFLPGSQMVFFVLNVVEAIGV 464 (477)
Q Consensus 388 ~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~---~~~~~~~g~~~~~~~~~~~~~~~~ 464 (477)
+.+.......++++..-.++|.++++..+....+|.++||.+...+....... ..+..++-|..+-++++++.++..
T Consensus 143 g~~n~a~lR~Y~a~~s~~~dR~rA~a~~~~~~vlg~ilGp~~q~~f~~Lg~~G~~i~~~~~~n~YTap~w~m~i~~i~~~ 222 (488)
T KOG2325|consen 143 GVGNFAVLRAYIADASTVEDRPRAFAATSGGFVLGIILGPTIQLAFTPLGEKGFMILPGLIFNMYTAPAWLMAILWIIYI 222 (488)
T ss_pred CcccHHHHHHHHHhccCccchHHHHHHhhhHHHHHHHHhHHHHHHHhhhcCCceEEcCcceEEecchHHHHHHHHHHHHH
Confidence 34556677788888777788999999998888888888888766554433111 111233457778888888888887
Q ss_pred HHHhh
Q 011783 465 LMTFK 469 (477)
Q Consensus 465 ~~~~~ 469 (477)
++...
T Consensus 223 v~i~~ 227 (488)
T KOG2325|consen 223 VIILF 227 (488)
T ss_pred HHHHh
Confidence 77665
No 270
>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans. UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. Genetic studies suggest that these three proteins forms complex that coordinates muscle contraction. The function of UNC-93 is not known but is most likely an ion channel regulatory protein [].
Probab=97.57 E-value=0.012 Score=47.25 Aligned_cols=107 Identities=18% Similarity=0.062 Sum_probs=80.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhhhhHHHHhHHHHHHh
Q 011783 321 AITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQN 400 (477)
Q Consensus 321 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 400 (477)
++......+..+ +.+.+.+++|.|+.+.++.+...+-.+..... .+..++....+.|++.+..+.....++.
T Consensus 44 ai~Y~~~~~s~l-~~P~iv~~lg~K~sm~lg~~~y~~y~~~~~~~-------~~~~l~~~s~l~G~~~a~lW~aqg~ylt 115 (156)
T PF05978_consen 44 AILYGSFAISCL-FAPSIVNKLGPKWSMILGSLGYAIYIASFFYP-------NSYTLYPASALLGFGAALLWTAQGTYLT 115 (156)
T ss_pred HHHHHHHHHHHH-hHHHHHHHHhhHHHHHHHHHHHHHHHHHHHhh-------hHHHHHHHHHHHhhhhHHhhHhhhHHHH
Confidence 333444455555 67888999999999999988776655544322 1335666677778888999999889999
Q ss_pred hcCCcchhhHHhHHHHHHHHHHHHHhhhHHHHHHH
Q 011783 401 RAVDQDQRGAANGIAMTGMSLFKAAGPAGGGALFS 435 (477)
Q Consensus 401 ~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~ 435 (477)
+..+++.+++-.|+.-.+.+.+.++|..+.-.+..
T Consensus 116 ~~s~~~~~~~~~~ifw~i~~~s~i~G~~~~~~~~~ 150 (156)
T PF05978_consen 116 SYSTEETIGRNTGIFWAIFQSSLIFGNLFLFFIFQ 150 (156)
T ss_pred HcCCHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999888888888876555443
No 271
>PF07672 MFS_Mycoplasma: Mycoplasma MFS transporter; InterPro: IPR011699 These proteins share some similarity with members of the Major Facilitator Superfamily (MFS).
Probab=97.53 E-value=0.0034 Score=54.12 Aligned_cols=245 Identities=9% Similarity=-0.003 Sum_probs=104.8
Q ss_pred cchhhHHHHHHHHhHHHHHHHHhHHHHhhhccccCCcccccccccccccchHHHHHHHHHhhccccccCCCCCCccchhh
Q 011783 166 EHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSESLFGKFPYFLPCLCISLFAFGETLHRHNDDDDSCDVSY 245 (477)
Q Consensus 166 ~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 245 (477)
|+|+........+.++|.++....--.-.+....- .-.|+.++ .....+..+.+++..+.++.-+...++++.++
T Consensus 2 k~K~~~s~~n~~gf~iG~ii~~ipF~~~~~~~~~~--~~~W~~I~-si~~lL~~IpLIly~ifGk~fd~~~~~~k~~k-- 76 (267)
T PF07672_consen 2 KKKSILSQFNPWGFNIGTIIVNIPFLISSSVVIAL--TNNWQWIL-SIFILLIFIPLILYIIFGKNFDIYSPKEKQEK-- 76 (267)
T ss_pred CccceeeeeccccchhhHHHHHhhHHhcchHHHHH--HHHHHHHH-HHHHHHHHHHHHHHHHhcccccccCccccccc--
Confidence 56777777777888888877644321110110101 11244443 11122223333333444443322222101000
Q ss_pred hhhhhhhccchhhcccCCchhhhhhcchhhHHHHHHHHHHHhhhhhhHHHHHHhhcCcccCCccccc----hh----hhH
Q 011783 246 DALESASAEVKEEEGREATPKKSLLKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYS----TQ----MVG 317 (477)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~----~~----~~g 317 (477)
.+...+.+....+.+|++.-|...+.+..+...... ...+.+..........+.+ .. ...
T Consensus 77 ----------~~~~~~~~~s~~~~LK~K~tw~w~~~Yg~wLv~~V~--p~t~~~~~~~~~~s~~ni~~~~~~~~~~~~~~ 144 (267)
T PF07672_consen 77 ----------ENSTLSKKPSYKSILKEKETWKWILIYGIWLVVVVF--PFTPSWFNILIWISPANIKSVVSGGGFNWIIP 144 (267)
T ss_pred ----------ccccccccchHHHHHccchHHHHHHHHHHHheeEEE--eccchhHhHhhhcCcccccccccccccchhhH
Confidence 000222346788999999999888777765433211 1111111111001111111 11 112
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHH----HHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhhhhHHHHh
Q 011783 318 EVLAITGFSLLVFQLSLYPFLERILGPIMVARIA----GVLTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNLLSVSIIT 393 (477)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 393 (477)
....+...+..++...++.|=..+.+||+.+... .++..+..+. .......+........+..++.|.+.-+..+
T Consensus 145 ~~~I~fv~g~~~G~~~ig~~nkt~~kRk~fi~~~~~~gi~~~~l~~~~-~~~~g~~~~~~~~~f~I~~Fl~G~f~WgiQ~ 223 (267)
T PF07672_consen 145 IFQILFVAGYFLGPFTIGLWNKTNYKRKPFIHFIISLGIVFFVLSIVV-VYFVGPGNAAGFAFFYIFGFLAGFFLWGIQG 223 (267)
T ss_pred HHHHHHHHHHhhhceeeccchhhhhhhhhHHHHHHHHHHHHHHHHHHH-HHHhCcchHHHHHHHHHHHHHHHHHHHhhhH
Confidence 2233333333344342333333334566655432 2222222222 1111111222233455556666666666666
Q ss_pred HHHHHHhh--cCCcchhhHHhHHHHHHHHHHHHHhhh
Q 011783 394 GLFILQNR--AVDQDQRGAANGIAMTGMSLFKAAGPA 428 (477)
Q Consensus 394 ~~~~~~~~--~~~~~~~g~~~g~~~~~~~~g~~~~~~ 428 (477)
.......| -.+|++.|...|+.-.++++.-.+.-.
T Consensus 224 ViL~lPhEyK~~~pk~ig~~Fg~iWGfGY~~yTi~~I 260 (267)
T PF07672_consen 224 VILNLPHEYKGYNPKKIGIQFGLIWGFGYIFYTIYDI 260 (267)
T ss_pred HHhcChhhhcCCCcceehhHHHHHHHHHHHHHHHHHH
Confidence 66665555 234566676666665555544444433
No 272
>KOG3880 consensus Predicted small molecule transporter involved in cellular pH homeostasis (Batten disease protein in human) [General function prediction only]
Probab=97.53 E-value=0.0018 Score=56.92 Aligned_cols=149 Identities=13% Similarity=0.070 Sum_probs=91.9
Q ss_pred HHHHHHHHHHhhhchhchHhHHHHHHHHhcccccc---------hhhhhhhHHHHHHHHHHHHHHhhhhhhhhhhcCCch
Q 011783 43 LFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKRE---------EDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKP 113 (477)
Q Consensus 43 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~---------~~~~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~Grr~ 113 (477)
....++..+++.+++-++..+..++.++-.-++.. +-.....|.+.-+-.+...+..+.+....||+---.
T Consensus 14 ~~~FwllGLcNN~~YVvmLSAA~DIl~~~~~~~~~~c~~h~~~r~c~~~stg~VLLaDilPsL~iKl~~Pff~~rfpf~~ 93 (409)
T KOG3880|consen 14 AVAFWLLGLCNNYGYVVMLSAAEDILSEQVSDPGPTCIPHNSGRECQSVSTGAVLLADILPSLAIKLTAPFFIHRFPFGF 93 (409)
T ss_pred chHHHHHHHhcccceEeehhhhhhhhccccCCCCCCcccccccccccccccchhhhhhhhHHHHHHHhchhhhhhcccch
Confidence 44556667777777666555555554432221100 001111466666777788888889999999875444
Q ss_pred hhHHHHHHHHHHHHHHHhhhhHHHHHHHHHHhhhcccchhhHHHHhhhhccccchhhHHHHHHHHhHHHHHHHHhHHHHh
Q 011783 114 VIIMGTASVVIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGPIKAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFL 193 (477)
Q Consensus 114 ~~~~~~~~~~i~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l 193 (477)
=..+..++.+.+.++.+++++.++=+.+-.+..++.|.--...--++..+++ ...+-++.+.+.++++|..--..+
T Consensus 94 Ri~~~v~~sa~s~~lVafs~s~~~sL~GV~~aSissGlGEiTFL~lss~Y~~----~~i~~WSSGTGgAGliGa~SYa~l 169 (409)
T KOG3880|consen 94 RIALVVLLSALSFFLVAFSNSVPMSLLGVVFASISSGLGEITFLALSSRYPS----IVIAGWSSGTGGAGLIGASSYAFL 169 (409)
T ss_pred HHHHHHHHHhcceEEEEeccchhHHHhhhhhhhhcCCcceeehhhhhccCCC----ceeccccCCCCcchhhhhhHHHHH
Confidence 4455667777888888999999988888888888777655542233333432 234455556666666666655555
Q ss_pred hh
Q 011783 194 AQ 195 (477)
Q Consensus 194 ~~ 195 (477)
.+
T Consensus 170 T~ 171 (409)
T KOG3880|consen 170 TS 171 (409)
T ss_pred hh
Confidence 54
No 273
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=97.52 E-value=0.0014 Score=63.13 Aligned_cols=148 Identities=13% Similarity=0.073 Sum_probs=97.8
Q ss_pred ccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHhhc-----chhHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHH
Q 011783 308 GLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILG-----PIMVARIAGVLTIPLLTSYPYIAMLSGFGLAFLLNCASV 382 (477)
Q Consensus 308 ~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 382 (477)
++|+++.+...+.....+.-.+- + +.|.++|.+. ||+-+.++.++..++...+...+..... .....+..+
T Consensus 19 ~l~ls~~~~~~~~~~~~lPw~~K-p-~~g~lsD~~pi~G~rr~~Y~~i~~~~~~~~~~~~~~~~~~~~s--~~~~~~~l~ 94 (433)
T PF03092_consen 19 DLGLSPAQLQRLSSLASLPWSIK-P-LYGLLSDSFPIFGYRRKPYMIIGWLLGAVSALVLALLPASESS--AAIAVVLLF 94 (433)
T ss_pred HcCCCHHHHHHHHHHHhCchHHh-h-hHHhhcccccccCCcchHHHHHHHHHHHHHHHHHHhcccccch--hhhHHHHHH
Confidence 38999999988888877766665 3 6789999863 5555566666665555544444331111 112223333
Q ss_pred HHhhhhHHHHhHHHHHHhhcC--CcchhhHHhHHHHHHHHHHHHHhhhHHHHHHHHhhhhccccCCCCchHHHHHHHHHH
Q 011783 383 VKNLLSVSIITGLFILQNRAV--DQDQRGAANGIAMTGMSLFKAAGPAGGGALFSWAQKRLDASFLPGSQMVFFVLNVVE 460 (477)
Q Consensus 383 ~~~~~~~~~~~~~~~~~~~~~--~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~g~~~~~~~~~~~~ 460 (477)
+..++.........++..|.. .++.+|...+.......+|+.++..+.|.+.+.. +++..|.+.+.+.
T Consensus 95 la~~g~a~~DV~aDa~vvE~~~~~p~~~g~lqS~~~~~~~~G~lv~~~l~G~l~~~~----------~~~~~f~i~~~~~ 164 (433)
T PF03092_consen 95 LASFGYAFADVAADALVVELARREPESRGDLQSFVWGVRSVGSLVGSLLSGPLLDSF----------GPQGVFLISAALP 164 (433)
T ss_pred HHHHHHHHHHHhhhHHHHHHhhcCCchhHHHHHHHHHHHHHHHHHHHHhhhhhhhcC----------CCeEEehHHHHHH
Confidence 344555555666666666644 2234888899999999999999999999998887 6667777777776
Q ss_pred HHHHHHHhh
Q 011783 461 AIGVLMTFK 469 (477)
Q Consensus 461 ~~~~~~~~~ 469 (477)
.+..+..+.
T Consensus 165 ~l~~~~~~~ 173 (433)
T PF03092_consen 165 LLMLIVALF 173 (433)
T ss_pred HHHHHHHHH
Confidence 666554444
No 274
>KOG3097 consensus Predicted membrane protein [Function unknown]
Probab=97.47 E-value=0.029 Score=50.10 Aligned_cols=97 Identities=12% Similarity=0.146 Sum_probs=65.1
Q ss_pred HHHHHHhhhhhhhhhhcCCchhhHHHHHHHHHHHHHHHhhhhHHHHHHHHHHhhhcccchhhH-HHHhhhhcc--ccch-
Q 011783 93 FGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFR--EEHQ- 168 (477)
Q Consensus 93 ~~~~~~~~~~G~l~Dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~-~~~i~~~~~--~~~r- 168 (477)
+..+..+++.+.+..++|-|+.+.++...+......- +-+.+..++-+-...|++.+..+.. -+++++.-. .++|
T Consensus 69 ~~l~~s~m~~~~~Ir~~g~K~tm~lav~~Y~lyiA~N-l~pr~~tlVPa~~~~G~aa~p~W~SkgtYlT~~g~~ya~~~~ 147 (390)
T KOG3097|consen 69 LSLIDSSMFMPLLIRFLGTKWTMVLAVFPYALYIAAN-LEPRYETLVPAGLVLGMAAGPIWASKGTYLTPMGQNYANQRG 147 (390)
T ss_pred HHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhh-cchhHHhhccHHHhhccccccccccCcceecHHHHHHHHhhh
Confidence 3444555666699999999999999888776543322 3467889999999999999988777 777766543 2444
Q ss_pred --------hhHHHHHHHHhHHHHHHHHhHH
Q 011783 169 --------ALGLSTVSTAWGIGLIIGPALG 190 (477)
Q Consensus 169 --------~~~~~~~~~~~~~g~~~g~~~~ 190 (477)
.+..+.+...+.-+...|..++
T Consensus 148 ~q~~~~~~~~ffg~Ffii~~~~qv~gn~is 177 (390)
T KOG3097|consen 148 EQAGDGMKVRFFGEFFIIFQCAQVWGNLIS 177 (390)
T ss_pred hhccCceeeeehhHHHHHHHHHHHHHHHHH
Confidence 3445555444444444444433
No 275
>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters. The transport of peptides into cells is a well-documented biological phenomenon which is accomplished by specific, energy-dependent transporters found in a number of organisms as diverse as bacteria and humans. The POT family of proteins is distinct from the ABC-type peptide transporters and was uncovered by sequence analyses of a number of recently discovered peptide transport proteins []. These proteins that seem to be mainly involved in the intake of small peptides with the concomitant uptake of a proton []. These integral membrane proteins are predicted to comprise twelve transmembrane regions.; GO: 0005215 transporter activity, 0006857 oligopeptide transport, 0016020 membrane; PDB: 4APS_A 2XUT_C.
Probab=97.44 E-value=0.0025 Score=60.39 Aligned_cols=91 Identities=16% Similarity=0.239 Sum_probs=72.2
Q ss_pred hhhHHHHHHHHHHHHHHHhhh---------hHHHHHHHHHHhhhcccchhhH-HHHhhhhcccc---chhhHHHHHHHHh
Q 011783 113 PVIIMGTASVVIFNTLFGLSV---------NFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREE---HQALGLSTVSTAW 179 (477)
Q Consensus 113 ~~~~~~~~~~~i~~~~~~~~~---------~~~~l~~~r~l~G~~~g~~~~~-~~~i~~~~~~~---~r~~~~~~~~~~~ 179 (477)
|.++++.++..+|.++..++. +.+.++++-++.++|.|..-|. .++.+|.++++ +|.+.+.++..+.
T Consensus 2 ktI~~g~~~~~~G~~ll~l~~~~~~~~~~~~~~~~~~gL~lia~G~G~~K~ni~~~~~dq~~~~~~~~~~~~F~~fY~~i 81 (372)
T PF00854_consen 2 KTILLGSIVYLLGHVLLTLSAIPPSLPSGIQLGLFYIGLALIAVGTGGIKPNISPFGADQYDEDDDSRRDSFFNWFYWGI 81 (372)
T ss_dssp HHHHHHHHHHHHHHHH--HHHTSSSC------CHHHHHHHHHHHHHHCCHHHHHHHHHHCSSTTTTTHHHHHHHHHHHHH
T ss_pred HhhhHHHHHHHHHHHHhHHHHhcchhhhhHHHHHHHHHHHHHHhccccccccHHHHHHHHhcccchhhhhhhHHHHHHHH
Confidence 567888888888888854432 2367888889999999999998 99999999865 5777888999999
Q ss_pred HHHHHHHHhHHHHhhhccccCCccccccccc
Q 011783 180 GIGLIIGPALGGFLAQPAEKYPNLFSSESLF 210 (477)
Q Consensus 180 ~~g~~~g~~~~~~l~~~~~~~~~~~~~~~~~ 210 (477)
++|..+++.+.+++.+ .++|...|
T Consensus 82 n~G~~~~~~~~~~i~~-------~~~~~~~f 105 (372)
T PF00854_consen 82 NIGSLFSPTLVPYIQQ-------NYGWFLGF 105 (372)
T ss_dssp HHHHHHHHHCCCHHHH-------CS-HHHHH
T ss_pred hhhhHhhcccchhhcc-------ccchhhhh
Confidence 9999999999999987 45555555
No 276
>PRK03612 spermidine synthase; Provisional
Probab=97.44 E-value=0.036 Score=54.66 Aligned_cols=165 Identities=16% Similarity=0.052 Sum_probs=86.9
Q ss_pred HHHHHhhhhhhHHHHHHhhcCcccCCccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHH---
Q 011783 282 YCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTIPL--- 358 (477)
Q Consensus 282 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~--- 358 (477)
.++..++...+.....-.+... +|-+..+.+.+.+++..+..+|+. +++++.++..++ ....-..+..++
T Consensus 23 ~f~sg~~~L~yEv~~~r~l~~~-----~G~s~~~~~~ii~~fl~glalGs~-l~~~~~~~~~~~-~~~~e~~i~l~~~~~ 95 (521)
T PRK03612 23 VFVCAACGLVYELLLGTLASYL-----LGDSVTQFSTVIGLMLFAMGVGAL-LSKYLLRDAAAG-FVAVELLLALLGGLS 95 (521)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH-----hCchHHHHHHHHHHHHHHHHHHHH-HHHhhhhhHHHH-HHHHHHHHHHHHHHH
Confidence 3344444445554444444333 677788888888888888888777 666665332222 111111111111
Q ss_pred HHHHHHHHHhhhhhHHHHHHHHHHHHhhhhHHHHhHHHHHHhhcCCcchhhHHhHHHHHHHHHHHHHhhhHHHHHHH-Hh
Q 011783 359 LTSYPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIAMTGMSLFKAAGPAGGGALFS-WA 437 (477)
Q Consensus 359 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~-~~ 437 (477)
..++....... ...........+..++..++..|....+..+. ..++.|...|-......+|+++|+.+.+.++- ..
T Consensus 96 ~~ll~~~~~~~-~~~~~~~~~~~~~~~~l~G~~~Pl~~~~~~~~-~~~~~g~~~g~ly~~ntlGa~~G~l~~~~vLlp~l 173 (521)
T PRK03612 96 ALILYAAFAFQ-GLSRLLLYVLVLLIGLLIGMEIPLLMRILQRI-RDQHLGHNVATVLAADYLGALVGGLAFPFLLLPRL 173 (521)
T ss_pred HHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-cccchhhhhhhhHhHHhHHHHHHHHHHHHHHHHhc
Confidence 11111111100 11112222333444566677777766655542 22345677788888899999999999888874 55
Q ss_pred hhhccccCCCCchHHHHHHHHHHHHHHH
Q 011783 438 QKRLDASFLPGSQMVFFVLNVVEAIGVL 465 (477)
Q Consensus 438 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 465 (477)
|.....++.+.+.++..+
T Consensus 174 ----------G~~~t~~~~a~l~~~~a~ 191 (521)
T PRK03612 174 ----------GLIRTAALTGSLNLLAAL 191 (521)
T ss_pred ----------chHHHHHHHHHHHHHHHH
Confidence 544444454444444433
No 277
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=97.41 E-value=2.9e-05 Score=76.33 Aligned_cols=164 Identities=12% Similarity=0.021 Sum_probs=2.8
Q ss_pred cCCccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHHHh----------------
Q 011783 305 KLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTIPLLTSYPYIAML---------------- 368 (477)
Q Consensus 305 ~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------- 368 (477)
+++++++++.+.|++.+.+-++.++..+ +..+..+|..|.+.+-.|.++++++.+++.+-...
T Consensus 29 iErRF~l~S~~~G~i~s~~di~~~~~~~-~vsy~g~~~hrprwig~g~~~~~~g~~l~~lPhf~~~~y~~~~~~~~~~~~ 107 (539)
T PF03137_consen 29 IERRFGLSSSQSGLISSSYDIGSLVVVL-FVSYFGGRGHRPRWIGIGALLMGLGSLLFALPHFLSGPYSYEEASNSNGNS 107 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHhcCCCHHHHHHHHHHHHHHHHHHHH-HHHHHhhhcCCcceeeecHHHHHHHHHHHhccHhhcCCCcccccccccccc
Confidence 5677999999999999999999999887 66677777777777778888888776655431000
Q ss_pred ----------------------------hhhhHHHHHHHHHHHHhhhhHHHHhHHHHHHhhcCCcchhhHHhHHHHHHHH
Q 011783 369 ----------------------------SGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIAMTGMS 420 (477)
Q Consensus 369 ----------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~ 420 (477)
.....+.++++..++.|++....++...+|+-|.+++++.+...|+......
T Consensus 108 ~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~gq~l~GiG~~pl~tLG~tYiDDnv~~~~splYiGi~~~~~~ 187 (539)
T PF03137_consen 108 SISSNLCDSSSSSQASSDCQDCCSSSSSSLSGYFYVFILGQLLIGIGATPLYTLGITYIDDNVSKKNSPLYIGILYAMSI 187 (539)
T ss_dssp --------------------------------------------SSS---------------------------------
T ss_pred ccccccccccccccccCccccccccccccchHHHHHHHHHHHHHhccccCCccceeeeeccccccccCccchhhhhHHhh
Confidence 0011345677778888999999999999999999999999999999999999
Q ss_pred HHHHHhhhHHHHHHHHhhhhcc------------ccCCCCchHHHHHHHHHHHHHHHHHhh
Q 011783 421 LFKAAGPAGGGALFSWAQKRLD------------ASFLPGSQMVFFVLNVVEAIGVLMTFK 469 (477)
Q Consensus 421 ~g~~~~~~~~g~l~~~~~~~~~------------~~~~~g~~~~~~~~~~~~~~~~~~~~~ 469 (477)
+|-++|-.++|.+.+.+.+... +...+.|...|++.+.+.++..+..+.
T Consensus 188 lGPa~Gf~lg~~~L~~yvD~~~~~~~~~~i~p~dp~WvGAWWLGfli~g~~~~l~aipl~~ 248 (539)
T PF03137_consen 188 LGPALGFLLGSFCLRIYVDFPKVPPDGVGITPSDPRWVGAWWLGFLICGILLFLSAIPLFF 248 (539)
T ss_dssp -------------------------------------------------------------
T ss_pred ccHHHHHHHHHHHHhceeCCccccccCCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 9999999998888765433211 112335777777777777766655443
No 278
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age. The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane
Probab=97.40 E-value=0.0019 Score=60.21 Aligned_cols=108 Identities=17% Similarity=0.243 Sum_probs=76.1
Q ss_pred hHHHHHHHHHHHHHHhhhhhhhhhhcCCchhhHHHHH--HHHHH---HHHHHhhhhHHHHHHHHHHhhhcccchhhH-HH
Q 011783 84 AGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTA--SVVIF---NTLFGLSVNFWMAVLTRFLLGSLNGLLGPI-KA 157 (477)
Q Consensus 84 ~g~~~s~~~~~~~~~~~~~G~l~Dr~Grr~~~~~~~~--~~~i~---~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~-~~ 157 (477)
.-+...+|.+|-.++.--...+ |+ |++.+.+.+ +..+. ....-+.++.|..++.-+..|+.+|..++- ..
T Consensus 283 Y~~Y~~~YQ~GVFISRSS~~~~--ri--r~lwils~LQ~~nl~~~~l~s~~~fipsi~ivf~lif~eGLlGGa~YVNtF~ 358 (402)
T PF02487_consen 283 YRWYQLLYQLGVFISRSSLPFF--RI--RRLWILSLLQVINLVFLLLQSWYRFIPSIWIVFVLIFYEGLLGGASYVNTFY 358 (402)
T ss_pred HHHHHHHHHHHHhhhhcceeee--eh--hhHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHhhhHHHHHHHH
Confidence 6677777777766554322221 33 444333332 22222 223334678999999999999988887776 88
Q ss_pred HhhhhccccchhhHHHHHHHHhHHHHHHHHhHHHHhhh
Q 011783 158 YACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQ 195 (477)
Q Consensus 158 ~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~ 195 (477)
.+.|-.|+++|..++|..+.+-++|..++.+++-.+-.
T Consensus 359 ~I~~~~~~~~REFslg~vsvsds~GI~lAgll~l~le~ 396 (402)
T PF02487_consen 359 RISEEVPPEDREFSLGAVSVSDSLGILLAGLLGLPLEP 396 (402)
T ss_pred HHHhcCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHH
Confidence 88888999999999999999999999999988876644
No 279
>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only]
Probab=97.26 E-value=0.046 Score=49.76 Aligned_cols=134 Identities=19% Similarity=0.086 Sum_probs=90.0
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhhhhHHHHh
Q 011783 314 QMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNLLSVSIIT 393 (477)
Q Consensus 314 ~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 393 (477)
...+.......+...++.. ..+.+.||.|||+....+......+.....+... .....+.......++..+...+
T Consensus 39 ~~~~~~~~~~~~~~~~~~~-~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~g~~~~~~~~ 113 (338)
T COG0477 39 LLYGLLLSAFFLGYAIGSL-LAGPLGDRYGRRKVLIIGLLLFLLGTLLLALAPN----VGLALLLILRLLQGLGGGGLLP 113 (338)
T ss_pred HHHHHHHHHHHHHHHHHhh-hhhhccccccchHHHHHHHHHHHHHHHHHHhCcc----chHHHHHHHHHHHHhhhHHHHH
Confidence 4677888888888888876 8899999999887777666543333222222222 1111222222324566677888
Q ss_pred HHHHHHhhcCCc-chhhHHhHHHHH-HHHHHHHHhhhHHHHHHHHhhhhccccCCCCchHHHHHHHHHH
Q 011783 394 GLFILQNRAVDQ-DQRGAANGIAMT-GMSLFKAAGPAGGGALFSWAQKRLDASFLPGSQMVFFVLNVVE 460 (477)
Q Consensus 394 ~~~~~~~~~~~~-~~~g~~~g~~~~-~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~g~~~~~~~~~~~~ 460 (477)
....+..+..|+ +.|+...+.... ...++..++|.+.+.+... ... +|+..|.......
T Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-------~~~~~~~~~~~~~ 174 (338)
T COG0477 114 VASALLSEWFPEATERGLAVGLVTLGAGALGLALGPLLAGLLLGA-LLW-------GWRAAFLLAALLG 174 (338)
T ss_pred HHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-Hhc-------chHHHHHHHHHHH
Confidence 889999999887 678999998888 5788889999888877776 111 6777555555444
No 280
>TIGR00769 AAA ADP/ATP carrier protein family. These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.
Probab=97.09 E-value=0.24 Score=48.02 Aligned_cols=125 Identities=8% Similarity=0.017 Sum_probs=83.4
Q ss_pred chhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHHHhhhhh-------------------
Q 011783 312 STQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTIPLLTSYPYIAMLSGFG------------------- 372 (477)
Q Consensus 312 ~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------- 372 (477)
+.+....+.....+...+.-..+..++++|++|++............++++.+........
T Consensus 41 gae~i~fLk~~~~lp~~~~~~~ly~~l~~~~~~~~lf~~~~~~F~~~f~lF~~vl~p~~~~~~p~~~~~~~~~~~~~~~~ 120 (472)
T TIGR00769 41 GAEIIPFLKTWVVVPMAVIFMLIYTKLSNILSKEALFYTVISPFLGFFALFAFVIYPLSDLLHPTALADKLLSLLPPGFM 120 (472)
T ss_pred chhhHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHhHHHHHHHHHHHHHHHHHHHhcchhhcCCcHHHHHHHhhcchhhH
Confidence 3456677776665655555233789999999999888776665555555544431110000
Q ss_pred ------HHHHHHHHHHHHhhhhHHHHh-HHHHHHhhcCCcchhhHHhHHHHHHHHHHHHHhhhHHHHHHHH
Q 011783 373 ------LAFLLNCASVVKNLLSVSIIT-GLFILQNRAVDQDQRGAANGIAMTGMSLFKAAGPAGGGALFSW 436 (477)
Q Consensus 373 ------~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~ 436 (477)
.-+...+..+.....+....+ ..+.+.+|..+.++..+-.++.....++|..+++.+..++.+.
T Consensus 121 ~~i~~~~~W~~~~FYv~~elw~~~vvS~lFW~fandi~t~~qakRfy~l~~~ganlg~i~sg~~~~~~~~~ 191 (472)
T TIGR00769 121 GFIAILRIWSFALFYVMAELWGSVVLSLLFWGFANQITTIDEAKRFYALFGLGANVALIFSGRTIKYFSKL 191 (472)
T ss_pred HHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 001111222333445555555 8889999999999999999999999999999999998887753
No 281
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=97.03 E-value=0.15 Score=47.91 Aligned_cols=146 Identities=10% Similarity=0.012 Sum_probs=98.6
Q ss_pred cccchhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhhhh
Q 011783 309 LNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNLLS 388 (477)
Q Consensus 309 ~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 388 (477)
.|++..+..--.-+...=+-+..++....+.|..+.|+.++++.+...+...++.+..... .+.+.-++.|...
T Consensus 35 kn~T~~qv~~~i~Pv~tYSyl~~l~~vflltd~l~Ykpviil~~~~~i~t~~lll~~~sv~------~mq~~q~~yg~~~ 108 (412)
T PF01770_consen 35 KNFTEEQVNNEIYPVWTYSYLAFLLPVFLLTDYLRYKPVIILQALSYIITWLLLLFGTSVL------AMQLMQFFYGLAT 108 (412)
T ss_pred cCCCHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHCcHH------HHHHHHHHHHHHH
Confidence 7888888765555554444444455778999999999999999888777777766664422 2223333333333
Q ss_pred HHHHhHHHHHHhhcCCcchhhHHhHHHHHHHHHHHHHhhhHHHHHHHHhhhhccccCCCCchHHHHHHHHHHHHHHHHHh
Q 011783 389 VSIITGLFILQNRAVDQDQRGAANGIAMTGMSLFKAAGPAGGGALFSWAQKRLDASFLPGSQMVFFVLNVVEAIGVLMTF 468 (477)
Q Consensus 389 ~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 468 (477)
..-.+.++++-..+|+++--++.+......-+|.+++..++-.+...... .+.....+......++.++.+
T Consensus 109 -a~evay~sYiys~v~~~~yq~vts~~raa~l~g~~~s~~lgQllvs~~~~--------sy~~L~~isl~~~~~a~~~~~ 179 (412)
T PF01770_consen 109 -AAEVAYYSYIYSVVDKEHYQKVTSYTRAATLVGRFISSLLGQLLVSFGGV--------SYFQLNYISLASVSLALLIAL 179 (412)
T ss_pred -HHHHHHHHHheeecCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC--------CHHHHHHHHHHHHHHHHHHHH
Confidence 33556667777778999999999999999999998888887766663311 455565555555555555554
Q ss_pred h
Q 011783 469 K 469 (477)
Q Consensus 469 ~ 469 (477)
+
T Consensus 180 f 180 (412)
T PF01770_consen 180 F 180 (412)
T ss_pred H
Confidence 4
No 282
>KOG3626 consensus Organic anion transporter [Secondary metabolites biosynthesis, transport and catabolism]
Probab=96.85 E-value=0.0037 Score=62.44 Aligned_cols=164 Identities=12% Similarity=-0.007 Sum_probs=128.3
Q ss_pred cCCccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHHH-----------------
Q 011783 305 KLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTIPLLTSYPYIAM----------------- 367 (477)
Q Consensus 305 ~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------- 367 (477)
++++++++..+.|++.+.+-++..+... ...+...|..|.+.+-.|.++++++.++..+-..
T Consensus 123 iErRF~i~Ss~sG~I~s~~dig~~l~i~-fVsYfG~r~HrPr~Ig~G~~~m~lgsll~alPHf~~~~y~~~~~~~~~~~~ 201 (735)
T KOG3626|consen 123 IERRFKISSSQSGLIASSYDIGNLLLII-FVSYFGSRGHRPRWIGIGLVLMGLGSLLFALPHFFSGPYEYELEVIKQSVE 201 (735)
T ss_pred hhhhcCCCCCcceeEeeecccchhhhhH-hHHHhccccCccceeeechhHHHHHHHHHhChHHhcCcchhhhhhhhcccc
Confidence 4567999999999998888888888766 6677777777888888888888888766654210
Q ss_pred -----------------------------hhhhhHHHHHHHHHHHHhhhhHHHHhHHHHHHhhcCCcchhhHHhHHHHHH
Q 011783 368 -----------------------------LSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIAMTG 418 (477)
Q Consensus 368 -----------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~ 418 (477)
..+...|+.+++..++.|++....++...+|+-|.+.+++.....|+..++
T Consensus 202 ~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~llff~~q~l~GIG~Tpi~tlGisYiDDnvk~~~SplYlgi~~~~ 281 (735)
T KOG3626|consen 202 NPSSSLSFCCCNKSTNLCRPSPENSKREKESTSYPFLLFFLGQLLLGIGATPIFTLGISYIDDNVKKKNSPLYLGILYSM 281 (735)
T ss_pred CCccccchhhccCCccccCCCCCcccccccCCchhHHHHHHHHHHhhcCCCCCccCCCccccccccccCCcHHHHHHHHH
Confidence 011125677888888899999999999999999999999999999999999
Q ss_pred HHHHHHHhhhHHHHHHHHhhhh-cc--------ccCCCCchHHHHHHHHHHHHHHHHHhh
Q 011783 419 MSLFKAAGPAGGGALFSWAQKR-LD--------ASFLPGSQMVFFVLNVVEAIGVLMTFK 469 (477)
Q Consensus 419 ~~~g~~~~~~~~g~l~~~~~~~-~~--------~~~~~g~~~~~~~~~~~~~~~~~~~~~ 469 (477)
..+|-++|-.+++.+...+.+. .. +...+.|...|++.+.+.++..+..++
T Consensus 282 ~~lGPaiGfllgS~~l~lYvD~~~~~~~it~~DPrWIGAWWlGFLi~g~~~~~~a~p~f~ 341 (735)
T KOG3626|consen 282 AILGPAIGFLLGSFCLKLYVDFGLSPIGITPTDPRWIGAWWLGFLICGALLLFSAVPLFF 341 (735)
T ss_pred HHhhhHHHHHHHHHHHHeeeccccCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHHh
Confidence 9999999999999998876554 11 123345777888888888888777665
No 283
>PF06779 DUF1228: Protein of unknown function (DUF1228); InterPro: IPR010645 This entry represents the N terminus of several putative bacterial membrane proteins, which may be sugar transporters. Note that many members are hypothetical proteins.
Probab=96.49 E-value=0.035 Score=39.11 Aligned_cols=73 Identities=21% Similarity=0.159 Sum_probs=59.1
Q ss_pred hhhhhHHHHHHhhcCcccCCccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHHH
Q 011783 288 HDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTIPLLTSYPYIAM 367 (477)
Q Consensus 288 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 367 (477)
.-+.+...+|....+ .++|..+.|++-+.+.++..++.+ ...++.++.++++.+..+.+...+..+.+.+...
T Consensus 7 gRFayTplLP~M~~~------~~ls~~~ag~lasaNy~GYL~GAl-~~~~~~~~~~~~~~~~~~l~~~~~~~~~ma~~~~ 79 (85)
T PF06779_consen 7 GRFAYTPLLPLMQAD------GGLSLSQAGWLASANYLGYLVGAL-LASRLPRHSRPRRLLRAGLLLTVLSTAAMALTHS 79 (85)
T ss_pred HHHHHHhHhHHHHHh------cCCCHHHHHHHHHHHHHHHHHHHH-HHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 345666677755544 799999999999999999999998 7788888877888888888888888777766654
No 284
>PRK03612 spermidine synthase; Provisional
Probab=96.47 E-value=0.12 Score=51.05 Aligned_cols=141 Identities=15% Similarity=0.074 Sum_probs=80.7
Q ss_pred HHHHHHhhhchhchHhHHH-HHHHHhcccccchhhhhhhHHHHHHHHHHHHHHhhhhhhhhhhcCCchhhHHHHHHHH--
Q 011783 47 WIIVLCTALPISSLFPFLY-FMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVV-- 123 (477)
Q Consensus 47 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~s~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~Grr~~~~~~~~~~~-- 123 (477)
....++.++..-.+-.+.. .+..-+|.+..+ .+.+.+++.+|.++|+.+.|++.++--|+.. .+-+.+..
T Consensus 20 ~~~~f~sg~~~L~yEv~~~r~l~~~~G~s~~~------~~~ii~~fl~glalGs~l~~~~~~~~~~~~~-~~e~~i~l~~ 92 (521)
T PRK03612 20 LAAVFVCAACGLVYELLLGTLASYLLGDSVTQ------FSTVIGLMLFAMGVGALLSKYLLRDAAAGFV-AVELLLALLG 92 (521)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCchHHH------HHHHHHHHHHHHHHHHHHHHhhhhhHHHHHH-HHHHHHHHHH
Confidence 3344444444444434443 344456777777 8999999999999999999988743322222 11111111
Q ss_pred -HHHHHH----HhhhhH-HHHHHHHHHhhhcccchhhH-HHHhhhhccccchhhHHHHHHHHhHHHHHHHHhHHHHhhh
Q 011783 124 -IFNTLF----GLSVNF-WMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQ 195 (477)
Q Consensus 124 -i~~~~~----~~~~~~-~~l~~~r~l~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~ 195 (477)
++..+. ++...+ ..++..-++.++..|+..|. ..+..+. ..++-++..|..+....+|.++|.++.+++.-
T Consensus 93 ~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~l~G~~~Pl~~~~~~~~-~~~~~g~~~g~ly~~ntlGa~~G~l~~~~vLl 170 (521)
T PRK03612 93 GLSALILYAAFAFQGLSRLLLYVLVLLIGLLIGMEIPLLMRILQRI-RDQHLGHNVATVLAADYLGALVGGLAFPFLLL 170 (521)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-cccchhhhhhhhHhHHhHHHHHHHHHHHHHHH
Confidence 111111 111111 11233345556667777776 4444332 22345677888888999999999999888764
No 285
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=96.40 E-value=0.048 Score=52.00 Aligned_cols=129 Identities=8% Similarity=-0.101 Sum_probs=92.9
Q ss_pred hHhHHHHHHHHhcccccchhhhhhhHHHHHHHHHHHHHHhhhhhhhhhhcCCchhhHHHHHHHHHHHHHHHh---h---h
Q 011783 60 LFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGL---S---V 133 (477)
Q Consensus 60 ~~~~~~~~~~~~~~s~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~Grr~~~~~~~~~~~i~~~~~~~---~---~ 133 (477)
....+..+.+.-|.++.. +|..-+...+....+.+...++.+|+|..|.=.++...-.....++.. + +
T Consensus 277 f~~lmt~yl~~~G~s~~~------igi~R~~gav~Gl~gT~~~p~l~~riGlvr~G~~~l~~q~~~L~~~v~~~~~~~~~ 350 (432)
T PF06963_consen 277 FGGLMTAYLKSQGYSPSV------IGIFRGLGAVFGLLGTWVYPWLMKRIGLVRAGLWSLWWQWVCLALCVVSFWAPGSP 350 (432)
T ss_pred CcHHHHHHHHHCCCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHhcchhhHHHHHHHHHHHHHHHHHHHhcCCCC
Confidence 345556666666999999 999999999999999999999999999988877776654433333322 1 1
Q ss_pred ----hHHHHHHHHHHhhhc-ccchhhHHHHhhhhccccchhhHHHHHHHHhHHHHHHHHhHHHHhh
Q 011783 134 ----NFWMAVLTRFLLGSL-NGLLGPIKAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLA 194 (477)
Q Consensus 134 ----~~~~l~~~r~l~G~~-~g~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~ 194 (477)
+...++.+-.+.-+| .+......-++-|..|+++||...|.-....++-.++-..++-.+.
T Consensus 351 ~~~~s~~~l~~gi~~SR~GLW~fDL~~~qi~Qe~V~~~~Rg~v~gvq~sl~~lf~ll~~~~~ii~~ 416 (432)
T PF06963_consen 351 FSSISAYLLLGGIALSRIGLWSFDLAVTQIMQENVPESERGAVSGVQNSLQSLFELLSFVLTIIFP 416 (432)
T ss_pred chhhHHHHHHHHHHHHHHHHHhhhHHHHHhhcccCCHHHhhHHHHHHHHHHHHHHHHHHHHHhccC
Confidence 333344444444444 3333333888999999999999999999999988888777765443
No 286
>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters. The transport of peptides into cells is a well-documented biological phenomenon which is accomplished by specific, energy-dependent transporters found in a number of organisms as diverse as bacteria and humans. The POT family of proteins is distinct from the ABC-type peptide transporters and was uncovered by sequence analyses of a number of recently discovered peptide transport proteins []. These proteins that seem to be mainly involved in the intake of small peptides with the concomitant uptake of a proton []. These integral membrane proteins are predicted to comprise twelve transmembrane regions.; GO: 0005215 transporter activity, 0006857 oligopeptide transport, 0016020 membrane; PDB: 4APS_A 2XUT_C.
Probab=96.26 E-value=0.036 Score=52.50 Aligned_cols=114 Identities=9% Similarity=-0.021 Sum_probs=81.7
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhhhh---hHHHHHHHHHHHHhhhhHHHHhHHHHHHhhcCCcc---hhhHHhHHHHHHH
Q 011783 346 MVARIAGVLTIPLLTSYPYIAMLSGF---GLAFLLNCASVVKNLLSVSIITGLFILQNRAVDQD---QRGAANGIAMTGM 419 (477)
Q Consensus 346 ~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~g~~~g~~~~~~ 419 (477)
+++..+.++..++.+++......... .....+.+...+.+++.++.=|...++..+.++++ ++.+....+....
T Consensus 2 ktI~~g~~~~~~G~~ll~l~~~~~~~~~~~~~~~~~~gL~lia~G~G~~K~ni~~~~~dq~~~~~~~~~~~~F~~fY~~i 81 (372)
T PF00854_consen 2 KTILLGSIVYLLGHVLLTLSAIPPSLPSGIQLGLFYIGLALIAVGTGGIKPNISPFGADQYDEDDDSRRDSFFNWFYWGI 81 (372)
T ss_dssp HHHHHHHHHHHHHHHH--HHHTSSSC------CHHHHHHHHHHHHHHCCHHHHHHHHHHCSSTTTTTHHHHHHHHHHHHH
T ss_pred HhhhHHHHHHHHHHHHhHHHHhcchhhhhHHHHHHHHHHHHHHhccccccccHHHHHHHHhcccchhhhhhhHHHHHHHH
Confidence 45667777777777775555433221 11223444445567788888899999999988765 4666777778888
Q ss_pred HHHHHHhhhHHHHHHHHhhhhccccCCCCchHHHHHHHHHHHHHHHHHhh
Q 011783 420 SLFKAAGPAGGGALFSWAQKRLDASFLPGSQMVFFVLNVVEAIGVLMTFK 469 (477)
Q Consensus 420 ~~g~~~~~~~~g~l~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 469 (477)
++|..+++.+.+++-++. ||...|.+.++..+++.+..+.
T Consensus 82 n~G~~~~~~~~~~i~~~~----------~~~~~f~i~~~~~~~~~~~f~~ 121 (372)
T PF00854_consen 82 NIGSLFSPTLVPYIQQNY----------GWFLGFGIPAIGMLLALIVFLS 121 (372)
T ss_dssp HHHHHHHHHCCCHHHHCS-----------HHHHHHHHHHHHHHHHHHHHC
T ss_pred hhhhHhhcccchhhcccc----------chhhhhhHHHHHHHHHHHHHHh
Confidence 999999999999998777 9999999999998888887655
No 287
>KOG3098 consensus Uncharacterized conserved protein [Function unknown]
Probab=95.78 E-value=0.12 Score=49.54 Aligned_cols=148 Identities=15% Similarity=0.250 Sum_probs=95.8
Q ss_pred HHHHHHHHHHHhhhchhchHhHHHHHH-HHhcccccchhhhhhhHHHHHHHHHHHHHHhhhhhhhhh---hcCCchhhHH
Q 011783 42 ELFSIWIIVLCTALPISSLFPFLYFMI-KDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVAD---RYGRKPVIIM 117 (477)
Q Consensus 42 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~s~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~D---r~Grr~~~~~ 117 (477)
++..+....+.+++.........|.-. -....+... ..+.++-.-...++..++..+.+.+++ ++||++.+.+
T Consensus 241 ~ml~L~~~f~~tG~~~Sf~~~iypt~i~ft~~~~~n~---~~~~ai~~~~~g~g~v~~g~~~~~l~~rir~fg~~~~~~~ 317 (461)
T KOG3098|consen 241 KMLLLFPFFFYTGLETSFWISIYPTCISFTRKLGSNT---TYLIAIYSIGIGLGEVIGGLDFSILSKRIRGFGRKPTVLI 317 (461)
T ss_pred hHHHHHHHHHHHHHHHHHHHhccchhhhhhhhccCcc---hhHHHHHHHHHhHHHHHHHHHHHHHhhhhhhcccCcchhH
Confidence 344555555555555555555555322 111222221 111334444445555556666666665 5799999999
Q ss_pred HHHHHHHHHHHHHhh------------------hhHHHHHHHHHHhhhcccchhhH-HHHhhhhccccchhhHHHHHHHH
Q 011783 118 GTASVVIFNTLFGLS------------------VNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTA 178 (477)
Q Consensus 118 ~~~~~~i~~~~~~~~------------------~~~~~l~~~r~l~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~ 178 (477)
+..+..+..++.-.. +++...++.-++.|++.+..... +.++.+.. +++|.++.++...-
T Consensus 318 ~~~~~~~~~~li~l~~p~dap~~~t~~~~~~~~~~~~~~~ii~~l~G~~D~~~~t~~~~ii~~~~-~~~~~~~fsi~kfy 396 (461)
T KOG3098|consen 318 GIIIHLIGFLLIHLSFPNDAPLRPTDSPPLLFTPSYYLALIIGFLLGFGDACFNTQRYVIIALLY-PDDRAQAFSLFKFY 396 (461)
T ss_pred HHHHHHHHHHHHhccccccCCCCCCcccccccccchhHHHHHHHHHhhHHHHHHHHHHHHHHHHh-cCchHHHHHHHHHH
Confidence 988888777766442 24667777889999999998887 99999999 68899999988888
Q ss_pred hHHHHHHHHhHHHHh
Q 011783 179 WGIGLIIGPALGGFL 193 (477)
Q Consensus 179 ~~~g~~~g~~~~~~l 193 (477)
..++..++-......
T Consensus 397 q~~~s~v~~f~~~~~ 411 (461)
T KOG3098|consen 397 QSVASCVAFFFSPYL 411 (461)
T ss_pred HHHHHHHHhhhhhhh
Confidence 888777665554443
No 288
>KOG4830 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=95.74 E-value=0.0048 Score=52.81 Aligned_cols=66 Identities=17% Similarity=0.296 Sum_probs=50.2
Q ss_pred HHHHHHHHHHhhhchhchHhHHHHHHHHhcccccchhhhhhhHHHHHHHHHHHHHHhhhhhhh---------hhhcCCch
Q 011783 43 LFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLV---------ADRYGRKP 113 (477)
Q Consensus 43 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l---------~Dr~Grr~ 113 (477)
.+....+.+++-+..+.....+-.+.++.+.++.. ...+.-+..+.-++..++.|.. .||+|||+
T Consensus 19 vf~yGvGHmlNDitAScWFTYlllfltqiglsp~~------~AmlML~GQVtda~st~ftGi~~d~nll~~~idr~G~~~ 92 (412)
T KOG4830|consen 19 VFAYGVGHMLNDITASCWFTYLLLFLTQIGLSPSS------RAMLMLIGQVTDAISTPFTGIFSDSNLLPACIDRIGRRM 92 (412)
T ss_pred eeeechhHHHhhHHHHHHHHHHHHHHHHhcCCcch------hHHHHHhhHHHHHHhcccccccccccccHHHhhhhccee
Confidence 34455667777777777777777888899999988 7777777888888888887754 46999987
Q ss_pred h
Q 011783 114 V 114 (477)
Q Consensus 114 ~ 114 (477)
.
T Consensus 93 ~ 93 (412)
T KOG4830|consen 93 S 93 (412)
T ss_pred e
Confidence 6
No 289
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT).
Probab=95.46 E-value=0.27 Score=47.45 Aligned_cols=110 Identities=13% Similarity=0.037 Sum_probs=75.4
Q ss_pred hHHHHHHHHHHHHHHhhhhhhhhhhcCCc-hhhHHHHHH---HHHHHHHHHhh---------hhHHHHHHHHHHhhhccc
Q 011783 84 AGYVGSSFMFGRALTSVFWGLVADRYGRK-PVIIMGTAS---VVIFNTLFGLS---------VNFWMAVLTRFLLGSLNG 150 (477)
Q Consensus 84 ~g~~~s~~~~~~~~~~~~~G~l~Dr~Grr-~~~~~~~~~---~~i~~~~~~~~---------~~~~~l~~~r~l~G~~~g 150 (477)
.-.....+.++-.+|..+..+.. .-++| +.+.+..+. +.-..++|..- ++-+..++.-++.|+..|
T Consensus 309 ~~i~~~~fNvgD~vGR~~~~~~~-~p~~~~~~l~i~s~~R~iFIPlf~lcn~~~~~~~p~~~~~d~~~~~~~~l~gltnG 387 (437)
T TIGR00939 309 PIICFLLFNLFDWLGRSLTSKFM-WPDEDSRWLPILSFLRVLFIPLFLLCNYPQRSRLPVFFPGDAYFIILMLLFGFSNG 387 (437)
T ss_pred HHHHHHHHHHHHHHHhhhhheeE-eeCCCccchHHHHHHHHHHHHHHHHhcCCccccCCeeecccHHHHHHHHHHHHhhh
Confidence 45667888888888887654431 11223 133333333 22223333322 356677778999999999
Q ss_pred chhhH-HHHhhhhccccchhhHHHHHHHHhHHHHHHHHhHHHHhh
Q 011783 151 LLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLA 194 (477)
Q Consensus 151 ~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~ 194 (477)
-.... ..+..+..+++||..+-.+...+..+|..+|..++-.+.
T Consensus 388 y~~s~~m~~~p~~v~~~e~e~aG~~~~~~l~~Gl~~Gs~l~~~~~ 432 (437)
T TIGR00939 388 YLGSLSMCLAPRQVDPHEREVAGALMVIFLLVGLALGAVLSFLFV 432 (437)
T ss_pred HHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 98887 888899999999999999999999999999888765443
No 290
>KOG0637 consensus Sucrose transporter and related proteins [Carbohydrate transport and metabolism]
Probab=95.29 E-value=0.057 Score=50.70 Aligned_cols=122 Identities=16% Similarity=0.005 Sum_probs=86.9
Q ss_pred cccchhhhHHHHHHHHHHHHHHHHHHHHHHHHh----hcchhHHH-HHHHHHHHHHHHHHHHHHhh--------h---hh
Q 011783 309 LNYSTQMVGEVLAITGFSLLVFQLSLYPFLERI----LGPIMVAR-IAGVLTIPLLTSYPYIAMLS--------G---FG 372 (477)
Q Consensus 309 ~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~----~~~~~~~~-~~~~~~~~~~~~~~~~~~~~--------~---~~ 372 (477)
.|.+....+.+.....+.+.+.++ +.|..+|| +||||..+ .+.....+++.++++..... . ..
T Consensus 62 lGvphk~~S~iw~~gPi~G~~vQP-~vG~~SDrc~sr~GRRRPfI~~~s~~i~~~l~Lig~aaDig~~lgd~~~~~~~~r 140 (498)
T KOG0637|consen 62 LGVPHKWSSIIWLCGPLSGLLVQP-LVGSASDRCTSRYGRRRPFILAGSLLIAVSLFLIGYAADIGLLLGDNERKPVKPR 140 (498)
T ss_pred cCCCcccccccccccccccceecc-cccccccccccccccccchHHHhhHHHHHHHhhhhhHhhhhHHhcCCcccccchH
Confidence 788888889998888889999998 77888886 56655544 55555666666666554321 1 11
Q ss_pred HHHHHHHHHHHHhhhhHHHHhHHHHHHhhcCCcchhhH-HhHHHHHHHHHHHHHhhhHHH
Q 011783 373 LAFLLNCASVVKNLLSVSIITGLFILQNRAVDQDQRGA-ANGIAMTGMSLFKAAGPAGGG 431 (477)
Q Consensus 373 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~-~~g~~~~~~~~g~~~~~~~~g 431 (477)
.....++...+.-+.........-++..+....+++.+ +++....+..+|+.+|-.+.+
T Consensus 141 ai~~~~lg~~LLD~A~n~~qgp~ra~L~Dl~~~d~~~~~Ans~f~~f~avGnvLGY~~g~ 200 (498)
T KOG0637|consen 141 AIVLFILGFWLLDVANNTLQGPCRALLADLARGDAKKTRANSVFSFFMAVGNVLGYALGS 200 (498)
T ss_pred HHHHHHHHhHHHHhhhhhhhhhHHHHHHHhccChhhhhccchhHHHHHHhcceeeeeccc
Confidence 22334444455556677778888899999888777777 999999999999888776655
No 291
>KOG2601 consensus Iron transporter [Inorganic ion transport and metabolism]
Probab=95.27 E-value=0.34 Score=44.35 Aligned_cols=150 Identities=10% Similarity=-0.010 Sum_probs=86.7
Q ss_pred hHHHHHHHHHHHhhhchhchHhHHHHHHHHhcccccchhhhhhhHHHHHHHHHHHHHHhhhhhhhhhhcCCchhhHHHHH
Q 011783 41 TELFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTA 120 (477)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~Grr~~~~~~~~ 120 (477)
+..+.+.++.++...+.-+.......++.+++.+.-. +.+.-..+-.....+..++.|...|+..|+|++...++
T Consensus 27 ~~~i~Ly~gy~lt~wgdR~W~F~VsL~M~~L~gnsl~-----lvAvyglvesgs~lvlg~ivGq~vDg~sr~Kvi~~~L~ 101 (503)
T KOG2601|consen 27 STVIFLYLGYFLTTWGDRMWEFSVSLFMILLGGNSLL-----LVAVYGLVESGSQLVLGPIVGQWVDGMSRVKVIQTWLL 101 (503)
T ss_pred ceeehhhHHHHHhHhhHhHHHHHHHHHHHHHcCceeh-----hHHHHHHHHHhHHHhhHHHHHHHhcchhHHHHHHHHHh
Confidence 3455678888888888888888888777777654322 02222223333456777888999999999999988877
Q ss_pred HHHHHHHHHH------hh------hhHHHHHHHHHHhhhcccc--hh-hHHH--Hhhhhc----cccchhhHH---HHHH
Q 011783 121 SVVIFNTLFG------LS------VNFWMAVLTRFLLGSLNGL--LG-PIKA--YACEIF----REEHQALGL---STVS 176 (477)
Q Consensus 121 ~~~i~~~~~~------~~------~~~~~l~~~r~l~G~~~g~--~~-~~~~--~i~~~~----~~~~r~~~~---~~~~ 176 (477)
+--++.++++ +. .++..+..+-.+.-.-.+. .. .+.+ +-.||. ..+.+.... +...
T Consensus 102 lqNlSv~vagglvi~~l~~~~~~~~t~pv~t~~lvLa~~i~aI~~Las~A~~i~i~RDWvvV~s~g~s~s~lt~mnatir 181 (503)
T KOG2601|consen 102 LQNLSVIVAGGLVITLLVHKDLKSATSPVFTVCLVLANLIAAIAVLASLAGTILIERDWVVVMSEGESPSVLTNMNATIR 181 (503)
T ss_pred hccHHHHHHHHHHhhheeecchhcccccHHHHHHHHHHHHHHHHHHHHhhheEEecccEEEEecCCCCHHHHhhcchhhh
Confidence 6544443332 21 2444554444443332221 11 1122 223443 233343333 4444
Q ss_pred HHhHHHHHHHHhHHHHhhh
Q 011783 177 TAWGIGLIIGPALGGFLAQ 195 (477)
Q Consensus 177 ~~~~~g~~~g~~~~~~l~~ 195 (477)
..-..-..+.|.+.|.+..
T Consensus 182 ~iDq~tn~Lapv~tg~Iit 200 (503)
T KOG2601|consen 182 GIDQSTNLLAPVITGLIIT 200 (503)
T ss_pred hhhhhhhchhhhhhcccce
Confidence 4555567788888888877
No 292
>PF01733 Nucleoside_tran: Nucleoside transporter; InterPro: IPR002259 Delayed-early response (DER) gene products include growth progression factors and several unknown products of novel cDNAs. Murine and human cDNAs from one novel DER gene (DER12) have been characterised to identify its product and to examine its role in the growth response []. Both sequences encode a hydrophobic 36kDa protein that is predicted to contain 8 transmembrane (TM) domains. The protein has been localised to the nucleolus, where its concentration increases following mitogen stimulation []. Although the function of the protein is unknown, its identification as a nucleolar gene transcriptionally activated by growth factors implicates it as participating in the proliferative response []. Sequence analysis reveals the protein to share a high degree of similarity with the C-terminal portion of equilibrative nucleoside transporters. These proteins are integral membrane proteins which enable the movement of hydrophilic nucleosides and nucleoside analogs down their concentration gradients across cell membranes. ENT family members have been identified in humans, mice, fish, tunicates, slime molds, and bacteria []. ; GO: 0005337 nucleoside transmembrane transporter activity, 0006810 transport, 0016020 membrane; PDB: 1HXI_A.
Probab=93.75 E-value=0.021 Score=52.42 Aligned_cols=107 Identities=20% Similarity=0.145 Sum_probs=2.4
Q ss_pred HHHHHHHHHHHHHhhhhhhhhhh-cCCchhhHHHH--HHHHHHHHHHH----------hhhhHHHHHHHHHHhhhcccch
Q 011783 86 YVGSSFMFGRALTSVFWGLVADR-YGRKPVIIMGT--ASVVIFNTLFG----------LSVNFWMAVLTRFLLGSLNGLL 152 (477)
Q Consensus 86 ~~~s~~~~~~~~~~~~~G~l~Dr-~Grr~~~~~~~--~~~~i~~~~~~----------~~~~~~~l~~~r~l~G~~~g~~ 152 (477)
.+...+.++-.+|....++.-=+ -.+|++...+. +++.-..++|. ..+|-+..++.-++.|+..|-.
T Consensus 186 ~~fl~Fn~gD~iGR~l~~~~~~~~~~~~~l~~~s~~R~~fiPlf~~cn~~p~~~~~~~~~~~d~~~~i~~~l~g~TNGyl 265 (309)
T PF01733_consen 186 VLFLLFNLGDFIGRFLASWPRWPGPSPRWLWILSLLRFLFIPLFLLCNVQPRPRYLPVLFNSDAWFIILMLLFGFTNGYL 265 (309)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHhcchhcceeEecccccccHHHHHHHHHHHHHHHHHHHhhcccccCCCcccchHHHHHHHHHHHHccchh
Confidence 45678888888888887764211 13444443321 22222222221 2235577788888999999998
Q ss_pred hhH-HHHhhhhccccchhhHHHHHHHHhHHHHHHHHhHHHH
Q 011783 153 GPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGF 192 (477)
Q Consensus 153 ~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~ 192 (477)
... ..+..+..++++|..+-.+......+|..+|..++-.
T Consensus 266 ~tl~m~~~p~~v~~~e~e~aG~~~~~~L~~Gl~~Gs~ls~~ 306 (309)
T PF01733_consen 266 STLAMMYAPKSVSPEERELAGSVMSFFLSFGLFIGSVLSFL 306 (309)
T ss_dssp -HHHH------------------------------------
T ss_pred hhceeeeCCCcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 887 8889999999999999888888888888888776543
No 293
>PF01733 Nucleoside_tran: Nucleoside transporter; InterPro: IPR002259 Delayed-early response (DER) gene products include growth progression factors and several unknown products of novel cDNAs. Murine and human cDNAs from one novel DER gene (DER12) have been characterised to identify its product and to examine its role in the growth response []. Both sequences encode a hydrophobic 36kDa protein that is predicted to contain 8 transmembrane (TM) domains. The protein has been localised to the nucleolus, where its concentration increases following mitogen stimulation []. Although the function of the protein is unknown, its identification as a nucleolar gene transcriptionally activated by growth factors implicates it as participating in the proliferative response []. Sequence analysis reveals the protein to share a high degree of similarity with the C-terminal portion of equilibrative nucleoside transporters. These proteins are integral membrane proteins which enable the movement of hydrophilic nucleosides and nucleoside analogs down their concentration gradients across cell membranes. ENT family members have been identified in humans, mice, fish, tunicates, slime molds, and bacteria []. ; GO: 0005337 nucleoside transmembrane transporter activity, 0006810 transport, 0016020 membrane; PDB: 1HXI_A.
Probab=93.01 E-value=0.034 Score=51.01 Aligned_cols=109 Identities=10% Similarity=0.066 Sum_probs=3.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhh-cchhHHHHHHHHHHHHHHHHHHHHHhhh-------hhHHHHHHHHHHHHhhhhHH
Q 011783 319 VLAITGFSLLVFQLSLYPFLERIL-GPIMVARIAGVLTIPLLTSYPYIAMLSG-------FGLAFLLNCASVVKNLLSVS 390 (477)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~ 390 (477)
.+..+.++-.+|+. +..+..-+. ++|++. ...+.-.+...++......+. ...-....+..++.++..+-
T Consensus 187 ~fl~Fn~gD~iGR~-l~~~~~~~~~~~~~l~-~~s~~R~~fiPlf~~cn~~p~~~~~~~~~~~d~~~~i~~~l~g~TNGy 264 (309)
T PF01733_consen 187 LFLLFNLGDFIGRF-LASWPRWPGPSPRWLW-ILSLLRFLFIPLFLLCNVQPRPRYLPVLFNSDAWFIILMLLFGFTNGY 264 (309)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHhcch-hcceeEecccccccHH-HHHHHHHHHHHHHHHHHhhcccccCCCcccchHHHHHHHHHHHHccch
Confidence 45567788888877 555532221 233333 333333333222222211100 01112333334444666777
Q ss_pred HHhHHHHHHhhcCCcchhhHHhHHHHHHHHHHHHHhhhH
Q 011783 391 IITGLFILQNRAVDQDQRGAANGIAMTGMSLFKAAGPAG 429 (477)
Q Consensus 391 ~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~ 429 (477)
.......+..+.+++++|..+-.+....-.+|-.+|..+
T Consensus 265 l~tl~m~~~p~~v~~~e~e~aG~~~~~~L~~Gl~~Gs~l 303 (309)
T PF01733_consen 265 LSTLAMMYAPKSVSPEERELAGSVMSFFLSFGLFIGSVL 303 (309)
T ss_dssp --HHHH---------------------------------
T ss_pred hhhceeeeCCCcCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 777777788888888899888888877777777777664
No 294
>PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.; GO: 0005471 ATP:ADP antiporter activity, 0005524 ATP binding, 0006810 transport, 0016021 integral to membrane
Probab=92.65 E-value=11 Score=37.00 Aligned_cols=124 Identities=8% Similarity=0.021 Sum_probs=75.2
Q ss_pred chhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHHHh-----hh-----------hh--H
Q 011783 312 STQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTIPLLTSYPYIAML-----SG-----------FG--L 373 (477)
Q Consensus 312 ~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~-----------~~--~ 373 (477)
+++....+-....+...+.-..+..++.++++++++...........+.++++.-.+ .. .. .
T Consensus 56 gae~I~flK~~~vlP~a~~f~~~y~kl~n~~s~~~lFy~~~~~F~~fF~~f~~vlyP~~~~lhp~~~~~~~~~~~~~~~~ 135 (491)
T PF03219_consen 56 GAEVIPFLKVWGVLPVAILFTILYSKLSNRLSREKLFYIIIIPFLGFFALFAFVLYPNRDILHPDAFADKLLAILPPGFK 135 (491)
T ss_pred ChhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHhhchhhcCCCHHHHHhhhhccchHH
Confidence 455555554443343333333377899999999887776555544444444332110 00 00 0
Q ss_pred H-------HHHHHHHHHHhhhhHHHHh-HHHHHHhhcCCcchhhHHhHHHHHHHHHHHHHhhhHHHHHHH
Q 011783 374 A-------FLLNCASVVKNLLSVSIIT-GLFILQNRAVDQDQRGAANGIAMTGMSLFKAAGPAGGGALFS 435 (477)
Q Consensus 374 ~-------~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~ 435 (477)
+ +...+.....-..+....+ ..+.+.++..+.++..+-.++.....++|..++..+...+.+
T Consensus 136 ~~i~~~~~Wt~slfYv~aElwgsvvlSlLFW~fAN~itt~~eAKRfYpl~g~ganigli~sG~~~~~~~~ 205 (491)
T PF03219_consen 136 GFIAMFRNWTFSLFYVMAELWGSVVLSLLFWGFANEITTVEEAKRFYPLFGLGANIGLIFSGQLTSYFSS 205 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 0 0111122222233344433 578999999999999999999999999999999888887777
No 295
>KOG1237 consensus H+/oligopeptide symporter [Amino acid transport and metabolism]
Probab=91.75 E-value=6.8 Score=39.30 Aligned_cols=160 Identities=15% Similarity=0.071 Sum_probs=94.7
Q ss_pred HHHHHhhcCcccCCccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHhh-cchhHHHHHHHHHHHHHHHHHHHHHhh---
Q 011783 294 EIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERIL-GPIMVARIAGVLTIPLLTSYPYIAMLS--- 369 (477)
Q Consensus 294 ~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 369 (477)
..+-.|+... ++.+...+.-......-....... .+++++|-+ ||-+++.++.++..+++.++.......
T Consensus 58 ~nlv~ylt~~-----~~~~~~~aa~~v~~f~G~~~~~~l-~g~~laD~f~gry~tI~~~s~i~~~G~~~lt~~a~~~~l~ 131 (571)
T KOG1237|consen 58 SNLVTYLTLE-----LHASGGGAANNVNAFGGTQFLLPL-LGAFLADSFLGRYFTINIGSLISLLGLFGLTLSAMIPALL 131 (571)
T ss_pred hHHHHHHHHH-----hccchHHHHHHHHHHhhHHHHHHH-HHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcC
Confidence 3344455544 555555444444444333344434 788888864 788888888887777765555443322
Q ss_pred ----------------hhhHHHHHHHHHHHHhhhhHHHHhHHHHHHhhcCCcc----hhh--HHhHHHHHHHHHHHHHhh
Q 011783 370 ----------------GFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVDQD----QRG--AANGIAMTGMSLFKAAGP 427 (477)
Q Consensus 370 ----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~g--~~~g~~~~~~~~g~~~~~ 427 (477)
.......+.....+...+.++.-|...+.-++-++++ .+. .-+.......+.|..++-
T Consensus 132 p~~~~~~~~~~~c~~~s~~q~~~~~~~l~lia~G~gg~r~~~~~fGadQfd~~~~~~~~~~~~fFnW~yf~~~~g~l~a~ 211 (571)
T KOG1237|consen 132 PFMCKFKPGGNVCESPSKLQLAVLYGALYLIALGAGGIRPCLLAFGADQFDELDPVEVKGIPSFFNWFYFSQNGGALLAQ 211 (571)
T ss_pred CccccCCCCCCcccCcchHHHHHHHHHHHHheeccCCCCCcchhhcccccCccCcchhhCcccchhHHHHHHHHHHHHHH
Confidence 1112334445555555677777888888888878732 222 334444455566666666
Q ss_pred hHHHHHHHHhhhhccccCCCCchHHHHHHHHHHHHHHHHHhh
Q 011783 428 AGGGALFSWAQKRLDASFLPGSQMVFFVLNVVEAIGVLMTFK 469 (477)
Q Consensus 428 ~~~g~l~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 469 (477)
.+.-++-+.. +|...|.+..++..++.++.+.
T Consensus 212 t~~vyiq~~~----------~w~lgf~i~~~~~~lai~iF~~ 243 (571)
T KOG1237|consen 212 TVLVYIQDNV----------GWKLGFGIPTVLNALAILIFLP 243 (571)
T ss_pred HHHHhhhhcc----------cceeeccHHHHHHHHHHHHHHc
Confidence 6555544444 8888888888887777766543
No 296
>PF07672 MFS_Mycoplasma: Mycoplasma MFS transporter; InterPro: IPR011699 These proteins share some similarity with members of the Major Facilitator Superfamily (MFS).
Probab=88.37 E-value=1.5 Score=38.27 Aligned_cols=102 Identities=20% Similarity=0.202 Sum_probs=55.8
Q ss_pred hHHHHHHHHHHHHHHhhhhhhhhhh-cCCchhhH----HHHHHHHHHHHHHHh-h----hhHHHHHHHHHHhhhcccchh
Q 011783 84 AGYVGSSFMFGRALTSVFWGLVADR-YGRKPVII----MGTASVVIFNTLFGL-S----VNFWMAVLTRFLLGSLNGLLG 153 (477)
Q Consensus 84 ~g~~~s~~~~~~~~~~~~~G~l~Dr-~Grr~~~~----~~~~~~~i~~~~~~~-~----~~~~~l~~~r~l~G~~~g~~~ 153 (477)
.....-++..|..+|....|..... +.||+.+. .+++.+.+..+.... . .++..+++.-++.|.+.=...
T Consensus 143 ~~~~~I~fv~g~~~G~~~ig~~nkt~~kRk~fi~~~~~~gi~~~~l~~~~~~~~g~~~~~~~~~f~I~~Fl~G~f~WgiQ 222 (267)
T PF07672_consen 143 IPIFQILFVAGYFLGPFTIGLWNKTNYKRKPFIHFIISLGIVFFVLSIVVVYFVGPGNAAGFAFFYIFGFLAGFFLWGIQ 222 (267)
T ss_pred hHHHHHHHHHHHhhhceeeccchhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHhhh
Confidence 4555666777777888888888774 45666544 234444444433211 1 146667888888888633333
Q ss_pred hHHHHhhhhccccchhhHHHHHHHHhHHHHHH
Q 011783 154 PIKAYACEIFREEHQALGLSTVSTAWGIGLII 185 (477)
Q Consensus 154 ~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~ 185 (477)
++.-.+.+-++..++.+.--.++..+++|-++
T Consensus 223 ~ViL~lPhEyK~~~pk~ig~~Fg~iWGfGY~~ 254 (267)
T PF07672_consen 223 GVILNLPHEYKGYNPKKIGIQFGLIWGFGYIF 254 (267)
T ss_pred HHHhcChhhhcCCCcceehhHHHHHHHHHHHH
Confidence 33344455554443333333444556665544
No 297
>KOG3880 consensus Predicted small molecule transporter involved in cellular pH homeostasis (Batten disease protein in human) [General function prediction only]
Probab=87.26 E-value=3 Score=37.51 Aligned_cols=74 Identities=15% Similarity=0.178 Sum_probs=57.7
Q ss_pred HHHHHHHHHHHhhhhHHHHHHHHHHhhhcccchhhH-HHHhhhhccccchhhHHHHHHHHhHHHHHHHHhHHHHh
Q 011783 120 ASVVIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFL 193 (477)
Q Consensus 120 ~~~~i~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l 193 (477)
+++.+...+..+.++++..++.-+..|+-+|..++- .--+.+-.++++|..+++....+-++|..++.+++-.+
T Consensus 327 l~ff~~~a~~~ftpsi~ivf~lI~~EGLlGGasYVNTf~~i~~e~~pd~rEfamsavs~sDS~Gi~lA~~lalpl 401 (409)
T KOG3880|consen 327 LLFFLLQAWYWFTPSIWIVFALILFEGLLGGASYVNTFHNIHKETEPDVREFAMSAVSISDSIGIFLAGLLALPL 401 (409)
T ss_pred HHHHHHHHHHHhccHHHHHHHHHHHHhhcCchHHHHHHHHHhhcCCchHHHHhHhhheecchhhHHHHHHHhccc
Confidence 344455556667889999999999999977776665 66666667789999999999999999988887776544
No 298
>KOG3574 consensus Acetyl-CoA transporter [Inorganic ion transport and metabolism]
Probab=87.19 E-value=21 Score=33.50 Aligned_cols=148 Identities=10% Similarity=0.038 Sum_probs=68.5
Q ss_pred hhHHHHHHHHHHHhhhhhhHHHHHHhhcCcccCCccccchhhhHHHHH---HHHHHHHHHHHHHHHHHHHhhcchhHHHH
Q 011783 274 PLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLA---ITGFSLLVFQLSLYPFLERILGPIMVARI 350 (477)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~---~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 350 (477)
++..++..+.+.... .+.....|..++. -|.|-+..+.... +..+ -++=++++-..-.+|+|||+..+.
T Consensus 32 ~illLl~LYllQGiP-~GL~~~iP~lL~a------k~vSyt~~a~fS~ay~P~sL-KllWaPiVDs~y~k~~GrrksWvv 103 (510)
T KOG3574|consen 32 SILLLLFLYLLQGIP-LGLIGAIPLLLQA------KGVSYTSQAIFSFAYWPFSL-KLLWAPIVDSVYSKRFGRRKSWVV 103 (510)
T ss_pred hHHHHHHHHHHcCCc-hhHhhhhHHHhcC------CCcchhhhhhhhhhhhHHHH-HHHHHhhhHHHHHHhhccccceee
Confidence 344444444443332 3444466666553 4555444443322 2211 122222244444559998875543
Q ss_pred -HHHHHHHHHHHHHHHHHhh-----hhhHHHHHHHHHHHHhhhhHHHHhHHHHHHhhcCCcchhhHHhHHHHHHHHHHHH
Q 011783 351 -AGVLTIPLLTSYPYIAMLS-----GFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIAMTGMSLFKA 424 (477)
Q Consensus 351 -~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ 424 (477)
...+.+..+..+....+.. ...........+++..+....--.+..........+++.|-++.........|.+
T Consensus 104 p~q~llG~~mllLs~~v~~~~g~ng~~p~v~~lt~~f~LLnflaAtQDIAVDgwALtmLs~e~lgyaST~q~Vg~~~Gyf 183 (510)
T KOG3574|consen 104 PCQYLLGLFMLLLSYLVDRGLGGNGGLPNVVALTLLFLLLNFLAATQDIAVDGWALTMLSRENLGYASTCQSVGQTAGYF 183 (510)
T ss_pred ehHHHHHHHHHHHhhCCCcccccCCCCcchHHHHHHHHHHHHHHhhhhhhhhHHHHHhcCHhhcCchhHHHHHHHhhhHH
Confidence 3333333333333322111 0111112222223333444444455556666667788888777666656666666
Q ss_pred HhhhH
Q 011783 425 AGPAG 429 (477)
Q Consensus 425 ~~~~~ 429 (477)
++..+
T Consensus 184 L~~~i 188 (510)
T KOG3574|consen 184 LGNVV 188 (510)
T ss_pred hhcce
Confidence 66544
No 299
>KOG4332 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=86.90 E-value=1.9 Score=37.87 Aligned_cols=148 Identities=13% Similarity=0.040 Sum_probs=79.3
Q ss_pred CCccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHh
Q 011783 306 LGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTIPLLTSYPYIAMLSGFGLAFLLNCASVVKN 385 (477)
Q Consensus 306 ~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 385 (477)
.+.+|+...++|.++.......++.+. +.+-+.|+.|||+..+.-.+...++++ ....+ ..-++.+.=.++|
T Consensus 64 YstYgFgkG~IgqLfiaGfgSsmLFGt-ivgSLaDkqGRKracvtycitYiLsCi----TKhSp---qYkVLmVGR~LGG 135 (454)
T KOG4332|consen 64 YSTYGFGKGDIGQLFIAGFGSSMLFGT-IVGSLADKQGRKRACVTYCITYILSCI----TKHSP---QYKVLMVGRVLGG 135 (454)
T ss_pred ehhcCccCCccceeeecccchHHHHHH-HHHHHHhhhccccceeeehHHHHHHHH----hhcCC---ceEEEeehhhhhh
Confidence 345888888999887766666667666 788999999999876655544444433 11111 1113333444445
Q ss_pred hhhHHHHhHHHHH-HhhcC-----CcchhhHHhHHHH-HHHHHHHHHhhhHHHHHHHHhhhhccccCCCCchHHHHHHHH
Q 011783 386 LLSVSIITGLFIL-QNRAV-----DQDQRGAANGIAM-TGMSLFKAAGPAGGGALFSWAQKRLDASFLPGSQMVFFVLNV 458 (477)
Q Consensus 386 ~~~~~~~~~~~~~-~~~~~-----~~~~~g~~~g~~~-~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~g~~~~~~~~~~ 458 (477)
+.....+...-+. +.|-. |++-.....+=.. ..+.+-++++...+..+.|+... |.-.+|-..+.
T Consensus 136 iaTsLLFSaFEsWliaEHnekr~FeqqWls~TFskA~ffgNglvAiiaGlfgn~lvd~~sl--------GPVAPFdAAac 207 (454)
T KOG4332|consen 136 IATSLLFSAFESWLIAEHNEKRGFEQQWLSVTFSKAVFFGNGLVAIIAGLFGNLLVDTFSL--------GPVAPFDAAAC 207 (454)
T ss_pred HHHHHHHHHHHHHHHHHhhhccCChHhhhhHHHHHHHHhhccHHHHHHHHHHHHHHHHhcc--------CCCCchHHHHH
Confidence 5555555555443 34432 2222222222222 12233334444444445554421 55567777776
Q ss_pred HHHHHHHHHhh
Q 011783 459 VEAIGVLMTFK 469 (477)
Q Consensus 459 ~~~~~~~~~~~ 469 (477)
+..++..+.+.
T Consensus 208 fLaigmAvil~ 218 (454)
T KOG4332|consen 208 FLAIGMAVILS 218 (454)
T ss_pred HHHHHHHHHHh
Confidence 66666655543
No 300
>KOG1479 consensus Nucleoside transporter [Nucleotide transport and metabolism]
Probab=86.53 E-value=30 Score=32.82 Aligned_cols=43 Identities=14% Similarity=0.063 Sum_probs=26.1
Q ss_pred HHHHHHHHHHHHhhhhHHHHhHHHHHHhhcCCcchhhHHhHHHH
Q 011783 373 LAFLLNCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIAM 416 (477)
Q Consensus 373 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~ 416 (477)
..........+.+++.+......+...++ .|+|.....++-.+
T Consensus 116 ff~vt~~~vv~~~~a~a~~qgs~~G~a~~-~P~~ytqavm~G~a 158 (406)
T KOG1479|consen 116 FFLVTLIIVVLLNLANAVVQGSLYGLAGL-FPSEYTQAVMSGQA 158 (406)
T ss_pred hHHHHHHHHHHHhhhhhhhccchhhhhhc-CCHHHHHHHHhcch
Confidence 44455555555667777777777777776 67666555444333
No 301
>PRK11469 hypothetical protein; Provisional
Probab=83.15 E-value=26 Score=29.32 Aligned_cols=52 Identities=10% Similarity=-0.012 Sum_probs=31.3
Q ss_pred ccchhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHH
Q 011783 310 NYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTIPLLTS 361 (477)
Q Consensus 310 g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 361 (477)
|.+.........+........+..++.++.+++++|..+.-|.++..++.-.
T Consensus 130 g~~~~~~~~~ig~~s~~~~~~G~~lG~~~g~~~g~~a~~lgG~iLI~iGi~i 181 (188)
T PRK11469 130 QVNIIATALAIGCATLIMSTLGMMVGRFIGSIIGKKAEILGGLVLIGIGVQI 181 (188)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4444444555555555555544546777777788887777777666666543
No 302
>PF11085 YqhR: Conserved membrane protein YqhR; InterPro: IPR024563 This family of proteins is conserved in the Bacillaceae family of the Firmicutes. Their function is not known.
Probab=77.04 E-value=38 Score=27.47 Aligned_cols=70 Identities=19% Similarity=0.282 Sum_probs=35.9
Q ss_pred hhHHHHHHhhcCcccCCccccchhhhHHHHHH--HHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHH
Q 011783 291 AYSEIFSLWANSPKKLGGLNYSTQMVGEVLAI--TGFSLLVFQLSLYPFLERILGPIMVARIAGVLTIPLLTSY 362 (477)
Q Consensus 291 ~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~--~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 362 (477)
.+....|.++..|+... ++.....|.+.++ .++.+++.+++-...+.+..+...-+..|.+.-++.+..+
T Consensus 45 ~FT~v~P~~ll~Pf~~g--~wk~t~~G~~igi~~~gv~Si~aAllY~~~l~k~~g~W~Gi~YG~~~W~ivF~~l 116 (173)
T PF11085_consen 45 HFTEVGPNFLLEPFALG--DWKNTWLGNLIGIVFIGVFSIVAALLYYALLKKFKGPWPGILYGLAWWAIVFFVL 116 (173)
T ss_pred cccccccChhhhhhhcc--chhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHh
Confidence 34444555555554432 3344455555443 3455666666333444444456666666666655554443
No 303
>COG5336 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=75.49 E-value=19 Score=26.49 Aligned_cols=40 Identities=18% Similarity=0.174 Sum_probs=25.1
Q ss_pred HHHHHHHHHHHHHHhhhhhhhhhhc-CCchhhHHHHHHHHH
Q 011783 85 GYVGSSFMFGRALTSVFWGLVADRY-GRKPVIIMGTASVVI 124 (477)
Q Consensus 85 g~~~s~~~~~~~~~~~~~G~l~Dr~-Grr~~~~~~~~~~~i 124 (477)
+.-.+.=+++..+.....||+.||| |-++..++..++.+.
T Consensus 45 a~klssefIsGilVGa~iG~llD~~agTsPwglIv~lllGf 85 (116)
T COG5336 45 AFKLSSEFISGILVGAGIGWLLDKFAGTSPWGLIVFLLLGF 85 (116)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHH
Confidence 3334455556666667889999997 667665555444433
No 304
>COG5336 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=68.04 E-value=27 Score=25.70 Aligned_cols=36 Identities=17% Similarity=0.096 Sum_probs=29.0
Q ss_pred CcchhhHHhHHHHHHHHHHHHHhhhHHHHHHHHhhh
Q 011783 404 DQDQRGAANGIAMTGMSLFKAAGPAGGGALFSWAQK 439 (477)
Q Consensus 404 ~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~ 439 (477)
.++.++.+.++-...-.+++++-....||+.|++.+
T Consensus 36 a~s~k~~~~a~klssefIsGilVGa~iG~llD~~ag 71 (116)
T COG5336 36 AESIKGYAQAFKLSSEFISGILVGAGIGWLLDKFAG 71 (116)
T ss_pred chhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 346678888888888888888888899999998743
No 305
>COG4262 Predicted spermidine synthase with an N-terminal membrane domain [General function prediction only]
Probab=67.35 E-value=1.1e+02 Score=28.56 Aligned_cols=58 Identities=19% Similarity=0.036 Sum_probs=32.2
Q ss_pred HHHHHHHHHHhhhhHHHHhHHHHHHhhcCCcchhhHHhHHHHHHHHHHHHHhhhHHHHHH
Q 011783 375 FLLNCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIAMTGMSLFKAAGPAGGGALF 434 (477)
Q Consensus 375 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~ 434 (477)
.++......+|...+.-.|....+.+... ++.....+.....-++|+..+..+..+++
T Consensus 106 ~Vly~lt~vIG~LVG~EiPL~mrml~~r~--a~~k~~~s~vl~~DYLGal~~gLl~p~ll 163 (508)
T COG4262 106 LVLYALTAVIGVLVGAEIPLLMRMLQRRQ--AKAKDLGSRVLTLDYLGALAGGLLWPFLL 163 (508)
T ss_pred HHHHHHHHHHHHHHhcchHHHHHHHHHHH--HHHHhhhhhhhhhHhhhhhhHHHHHHHHH
Confidence 34555556666677777788777776622 12222222233345677666666655554
No 306
>PF11947 DUF3464: Protein of unknown function (DUF3464); InterPro: IPR021855 This family of proteins are functionally uncharacterised. This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 137 to 196 amino acids in length.
Probab=63.60 E-value=51 Score=26.39 Aligned_cols=50 Identities=10% Similarity=0.042 Sum_probs=35.3
Q ss_pred HHHHHHHHHHHHhhhhHHHHhHHHHHHhhcCCcchhhHHhHHHHHHHHHHHHH
Q 011783 373 LAFLLNCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIAMTGMSLFKAA 425 (477)
Q Consensus 373 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~ 425 (477)
.|+.++.... ++..+...+.|..++..-+++..|+..|+-..-.+++...
T Consensus 96 ~~~~~~~S~~---~Fg~gllGisYGilSaSWD~~r~GSllG~~e~~~N~~r~~ 145 (153)
T PF11947_consen 96 PWAVLLVSLV---FFGLGLLGISYGILSASWDPEREGSLLGWEEFKRNWGRMW 145 (153)
T ss_pred chHHHHHHHH---HHHHHHHhhhhhhcccccCCCCCCCcccHHHHHHhHHHHH
Confidence 4444444444 4455566677778888889999999999998887776543
No 307
>COG1971 Predicted membrane protein [Function unknown]
Probab=60.13 E-value=1e+02 Score=25.73 Aligned_cols=28 Identities=14% Similarity=-0.095 Sum_probs=18.6
Q ss_pred HHHHHHHhhcchhHHHHHHHHHHHHHHH
Q 011783 334 LYPFLERILGPIMVARIAGVLTIPLLTS 361 (477)
Q Consensus 334 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 361 (477)
++.++.+.+|.+..+..+.++..++.-.
T Consensus 156 IG~~~g~~~g~~ae~lgGiiLI~~G~~i 183 (190)
T COG1971 156 IGRKLGKFLGKYAEILGGIILIGIGVKI 183 (190)
T ss_pred HHHHHHHHHhhHHHHHHHHHHHHHHHHH
Confidence 5666666677777777777766665443
No 308
>TIGR02230 ATPase_gene1 F0F1-ATPase subunit, putative. This model represents a protein found encoded in F1F0-ATPase operons in several genomes, including Methanosarcina barkeri (archaeal) and Chlorobium tepidum (bacterial). It is a small protein (about 100 amino acids) with long hydrophic stretches and is presumed to be a subunit of the enzyme.
Probab=58.97 E-value=65 Score=23.65 Aligned_cols=22 Identities=9% Similarity=0.086 Sum_probs=14.1
Q ss_pred HHHHHHHhhcchhHHHHHHHHH
Q 011783 334 LYPFLERILGPIMVARIAGVLT 355 (477)
Q Consensus 334 ~~~~l~~~~~~~~~~~~~~~~~ 355 (477)
++.|+.++++..+...+.+++.
T Consensus 62 lG~WLD~~~~t~~~~tl~~lll 83 (100)
T TIGR02230 62 VGIWLDRHYPSPFSWTLTMLIV 83 (100)
T ss_pred HHHHHHhhcCCCcHHHHHHHHH
Confidence 7889988888665444433333
No 309
>TIGR00267 conserved hypothetical protein TIGR00267. This family is represented in three of the first four completed archaeal genomes, with two members in A. fulgidus.
Probab=58.24 E-value=55 Score=26.85 Aligned_cols=35 Identities=20% Similarity=0.224 Sum_probs=20.9
Q ss_pred HHHHhhhhhhhhhhcCCchhhHHHHHHHHHHHHHH
Q 011783 95 RALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLF 129 (477)
Q Consensus 95 ~~~~~~~~G~l~Dr~Grr~~~~~~~~~~~i~~~~~ 129 (477)
..+.-.+.|++.-|++.++...-++=...++.+..
T Consensus 126 ~~~~L~ilG~~~a~~s~~~~~~s~lr~~~~G~~aa 160 (169)
T TIGR00267 126 TLIALLVLGVYLGRISRENILISSLKMVVIGLLVA 160 (169)
T ss_pred HHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHH
Confidence 44555667888888877766655544444444433
No 310
>COG4769 Predicted membrane protein [Function unknown]
Probab=57.67 E-value=22 Score=28.52 Aligned_cols=52 Identities=17% Similarity=0.320 Sum_probs=37.5
Q ss_pred HHHHHHHHhhhhhhhhhhcCCchhhHHHHHHHHHHHHHHHhhhhHHHHHHHHHHhhhc
Q 011783 91 FMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLSVNFWMAVLTRFLLGSL 148 (477)
Q Consensus 91 ~~~~~~~~~~~~G~l~Dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~l~~~r~l~G~~ 148 (477)
+.+...+.+...=++..++|+|.+-.+|.-.. -++.+|..++.+++++.+--
T Consensus 82 ~sfaG~i~S~L~m~~l~~f~~k~~S~lgiS~m------GaF~hNl~QLivas~Lv~~~ 133 (181)
T COG4769 82 YSFAGAILSTLFMYFLYQFGPKYLSLLGISVM------GAFTHNLGQLIVASFLVFTT 133 (181)
T ss_pred HHHHHHHHHHHHHHHHHHcCCceEeeeehhhH------HHHHHhHHHHHHHHHHHhcc
Confidence 44445566667778889999998866654433 36789999999999887743
No 311
>PF13000 Acatn: Acetyl-coenzyme A transporter 1; InterPro: IPR024371 Acetyl-coenzyme A transporter 1 (also known as acatn) is a multipass transmembrane protein that appears to promote 9-O-acetylation in gangliosides [, ]. This entry represents acatn and its homologues.; GO: 0008521 acetyl-CoA transporter activity, 0016021 integral to membrane
Probab=57.65 E-value=1.1e+02 Score=30.25 Aligned_cols=56 Identities=11% Similarity=0.062 Sum_probs=41.1
Q ss_pred HHHHHhhhcccchhhH-HHHhhhhccccchhhHHHHHHHHhHHHHHHHHhHHHHhhh
Q 011783 140 LTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQ 195 (477)
Q Consensus 140 ~~r~l~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~ 195 (477)
+.-.+.-+..-...++ .+.-+.+.+|.-=|+.|.+.+...++|+---..+.-++.+
T Consensus 410 ~~~~l~sf~stvmFVai~AFharISDP~IGGTYMTLLNTvSNLGGtWP~~~vL~lVD 466 (544)
T PF13000_consen 410 IQHVLSSFMSTVMFVAIMAFHARISDPAIGGTYMTLLNTVSNLGGTWPRTFVLWLVD 466 (544)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhccCcccchHHHHHHHHHHhcCCCchHHHHHHHhh
Confidence 3345555554455555 8899999999999999999999999887666655555555
No 312
>KOG2601 consensus Iron transporter [Inorganic ion transport and metabolism]
Probab=56.56 E-value=1.8e+02 Score=27.56 Aligned_cols=28 Identities=11% Similarity=0.026 Sum_probs=20.9
Q ss_pred hHHHHHHHHHHHHHhhhHHHHHHHHhhh
Q 011783 412 NGIAMTGMSLFKAAGPAGGGALFSWAQK 439 (477)
Q Consensus 412 ~g~~~~~~~~g~~~~~~~~g~l~~~~~~ 439 (477)
.+.....-.....+.|.+.|.+......
T Consensus 177 natir~iDq~tn~Lapv~tg~Iitfvsl 204 (503)
T KOG2601|consen 177 NATIRGIDQSTNLLAPVITGLIITFVSL 204 (503)
T ss_pred chhhhhhhhhhhchhhhhhcccceeech
Confidence 3555556677888999999999887733
No 313
>COG3202 ATP/ADP translocase [Energy production and conversion]
Probab=56.34 E-value=2.1e+02 Score=28.17 Aligned_cols=126 Identities=10% Similarity=0.042 Sum_probs=78.0
Q ss_pred cchhhhHHHHHHHHH-HHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHHHh------------h-----hhh
Q 011783 311 YSTQMVGEVLAITGF-SLLVFQLSLYPFLERILGPIMVARIAGVLTIPLLTSYPYIAML------------S-----GFG 372 (477)
Q Consensus 311 ~~~~~~g~~~~~~~~-~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~-----~~~ 372 (477)
.+++....+-...-+ ++++... +..++.++..++++...........++++++.-.+ . .+.
T Consensus 58 ~gae~I~FlK~~~vlP~avif~~-iy~kl~~~lt~~~vF~~~~~~F~~fF~LFa~Vi~P~~~~~hp~~~~~~~~~~~~p~ 136 (509)
T COG3202 58 QGAESISFLKTWGVLPSAVIFTI-IYQKLLNILTREKVFYIILGFFLGFFALFAFVIYPYKDILHPDPEFSRDLFADLPM 136 (509)
T ss_pred CcchhhHHHHHHHhchHHHHHHH-HHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHHhccccccCCCHHHHHHHHhhCCc
Confidence 445566666655555 3344444 78899999998888776665555555555443220 0 010
Q ss_pred H--H-------HHHHHHHHHHhhhhHHHHh-HHHHHHhhcCCcchhhHHhHHHHHHHHHHHHHhhhHHHHHHHHh
Q 011783 373 L--A-------FLLNCASVVKNLLSVSIIT-GLFILQNRAVDQDQRGAANGIAMTGMSLFKAAGPAGGGALFSWA 437 (477)
Q Consensus 373 ~--~-------~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~ 437 (477)
. | +.........-..+..... ..+...+|....++..+-.++.+...+++..++..+..++.++.
T Consensus 137 ~l~~~ili~~~Ws~s~~Yi~aELWgslV~S~lFw~faNeitt~~eakRFy~lf~l~~ni~lllsg~~~~~~~k~~ 211 (509)
T COG3202 137 FLKWFILIVGEWSYSLFYIMAELWGSLVLSLLFWQFANEITTIEEAKRFYPLFGLGANISLLLSGEVTSWLSKHR 211 (509)
T ss_pred cceeeeEeecchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHhhhhHHHHHHHHHHHHHHHHHHHHHHhhch
Confidence 0 0 1111222222233334443 66778899999999999999999999999988888888877643
No 314
>PF07760 DUF1616: Protein of unknown function (DUF1616); InterPro: IPR011674 This is a group of sequences from hypothetical archaeal proteins. The region in question is approximately 330 amino acid residues long.
Probab=54.07 E-value=1.7e+02 Score=26.55 Aligned_cols=57 Identities=25% Similarity=0.337 Sum_probs=39.2
Q ss_pred HHHHHHHhhhcccchhhHHHHhhhhccccchhhHHHHHHHHhHHHHHHHHhHHHHhh
Q 011783 138 AVLTRFLLGSLNGLLGPIKAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLA 194 (477)
Q Consensus 138 l~~~r~l~G~~~g~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~ 194 (477)
--..|.+.|+-.-.+.|.+++++-.+|++++--..--...+.+++.++-|++|-.+.
T Consensus 22 ~~~lr~~~g~~~vlf~PGy~l~~~lfp~~~~l~~~er~~ls~glSi~~~~~~g~~l~ 78 (287)
T PF07760_consen 22 IPPLRVILGFPFVLFLPGYALVAALFPRKHDLDGIERLALSVGLSIAIVPLIGLLLN 78 (287)
T ss_pred hhHHHHHHHHHHHHHhccHHHHHHHccCcCCCcHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 567888888877778888999999999665544444444555555566666665443
No 315
>PF02694 UPF0060: Uncharacterised BCR, YnfA/UPF0060 family; InterPro: IPR003844 This entry describes integral membrane proteins of unknown function.; GO: 0016020 membrane
Probab=53.74 E-value=31 Score=25.40 Aligned_cols=48 Identities=17% Similarity=0.179 Sum_probs=39.9
Q ss_pred hHHHHHHHHHHHHHHhhhhhhhhhhcCCchhhHHHHHHHHHHHHHHHh
Q 011783 84 AGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGL 131 (477)
Q Consensus 84 ~g~~~s~~~~~~~~~~~~~G~l~Dr~Grr~~~~~~~~~~~i~~~~~~~ 131 (477)
.|-+.++|.-.+.+.++.+++..|+.-+-+-=.++..++.++..+..+
T Consensus 56 fGRvYAAYGGvfI~~Sl~W~w~vdg~~Pd~~D~iGa~i~L~G~~iI~~ 103 (107)
T PF02694_consen 56 FGRVYAAYGGVFIVASLLWGWLVDGVRPDRWDWIGAAICLVGVAIILF 103 (107)
T ss_pred chhHHHHhhhhHHHHHHHHHhhhcCcCCChHHHHhHHHHHHhHHheEe
Confidence 789999999999999999999999998877777777777766655443
No 316
>KOG3810 consensus Micronutrient transporters (folate transporter family) [Coenzyme transport and metabolism]
Probab=52.64 E-value=33 Score=31.79 Aligned_cols=94 Identities=14% Similarity=0.128 Sum_probs=70.4
Q ss_pred hHHHHHHHHHHHHHHhhhhhhhhhhcCCchhhHH--HHHHHHHHHHHHHhhhhHHHHHHHHHHhhhcccchhhH-HHHhh
Q 011783 84 AGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIM--GTASVVIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGPI-KAYAC 160 (477)
Q Consensus 84 ~g~~~s~~~~~~~~~~~~~G~l~Dr~Grr~~~~~--~~~~~~i~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~-~~~i~ 160 (477)
-|-.-++..+..+++.+..|.+--++.|..-+++ +.+.-+...++++.++++|..+++..+.+.-.....+. ..-++
T Consensus 273 NG~veAv~tlLGa~~~~~~g~l~i~w~r~g~~ll~~~s~~~agllf~m~~t~~Iw~~Ya~yvlfr~~y~l~itiA~~~iA 352 (433)
T KOG3810|consen 273 NGAVEAVSTLLGAIAALAAGYLNINWNRWGDLLLAVGSAVQAGLLFIMAQTQHIWVCYAGYVLFRVIYQLTITIATFQIA 352 (433)
T ss_pred cCHHHHHHHHHHHHHHHHHHheeeccchhhHHHHHHHHHHhhhhhhhhhcccceehhhhhHHHHHhhHhhhhhHHHHHHH
Confidence 5777788888889999999999998888754444 44444445556667789999988888887776666665 77788
Q ss_pred hhccccchhhHHHHHHH
Q 011783 161 EIFREEHQALGLSTVST 177 (477)
Q Consensus 161 ~~~~~~~r~~~~~~~~~ 177 (477)
+...+|.-|..+|+...
T Consensus 353 ~nL~~e~~gLvFGiNTF 369 (433)
T KOG3810|consen 353 RNLSSELFGLVFGINTF 369 (433)
T ss_pred HhhhhhhheeeeehHHH
Confidence 88887887888777643
No 317
>PRK02237 hypothetical protein; Provisional
Probab=48.71 E-value=53 Score=24.33 Aligned_cols=48 Identities=17% Similarity=0.083 Sum_probs=39.0
Q ss_pred hHHHHHHHHHHHHHHhhhhhhhhhhcCCchhhHHHHHHHHHHHHHHHh
Q 011783 84 AGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGL 131 (477)
Q Consensus 84 ~g~~~s~~~~~~~~~~~~~G~l~Dr~Grr~~~~~~~~~~~i~~~~~~~ 131 (477)
.|-+.++|.-.+.+.++.+++..|+.-+-+-=.+|..+..++..+..+
T Consensus 58 ~GRvYAAYGGvyI~~Sl~W~w~vdg~~Pd~~D~iGa~v~L~G~~iI~~ 105 (109)
T PRK02237 58 FGRVYAAYGGVYVAGSLLWLWVVDGVRPDRWDWIGAAICLVGMAVIMY 105 (109)
T ss_pred hhhHHHHhhhHHHHHHHHHHHHhcCcCCChhHHHhHHHHHHhHHHhee
Confidence 788999999999999999999999997777666777666666655433
No 318
>KOG2881 consensus Predicted membrane protein [Function unknown]
Probab=47.19 E-value=1.8e+02 Score=25.69 Aligned_cols=25 Identities=24% Similarity=0.234 Sum_probs=15.8
Q ss_pred HHHHHHHhhcchhHHHHHHHHHHHH
Q 011783 334 LYPFLERILGPIMVARIAGVLTIPL 358 (477)
Q Consensus 334 ~~~~l~~~~~~~~~~~~~~~~~~~~ 358 (477)
-+..+..|+..|.+...+.++..+.
T Consensus 259 gGk~lAskIS~rtVt~~ggi~Fi~F 283 (294)
T KOG2881|consen 259 GGKYLASKISVRTVTLIGGILFIIF 283 (294)
T ss_pred hhHHHhhhheeEEEEEecchhHHHH
Confidence 4567788888776666655544433
No 319
>COG1268 BioY Uncharacterized conserved protein [General function prediction only]
Probab=47.07 E-value=90 Score=25.99 Aligned_cols=24 Identities=17% Similarity=0.517 Sum_probs=20.6
Q ss_pred HHHHHHHHHHHhhhhhhhhhhcCC
Q 011783 88 GSSFMFGRALTSVFWGLVADRYGR 111 (477)
Q Consensus 88 ~s~~~~~~~~~~~~~G~l~Dr~Gr 111 (477)
+.-|.+++.+...+.|++.||.-+
T Consensus 88 TgGyL~gfi~aa~l~G~l~~k~~~ 111 (184)
T COG1268 88 TGGYLIGFIIAAFLIGLLAEKIRK 111 (184)
T ss_pred chhHHHHHHHHHHHHHHHHHhhhc
Confidence 356778889999999999999985
No 320
>TIGR02840 spore_YtaF putative sporulation protein YtaF. This protein family was identified, at the time of the publication of the Carboxydothermus hydrogenoformans genome, as having a phylogenetic profile that exactly matches the subset of the Firmicutes capable of forming endospores. The species include Bacillus anthracis, Clostridium tetani, Thermoanaerobacter tengcongensis, Geobacillus kaustophilus, etc. This protein, previously named YtaF, is therefore a putative sporulation protein.
Probab=45.79 E-value=1.9e+02 Score=24.65 Aligned_cols=47 Identities=13% Similarity=0.140 Sum_probs=20.7
Q ss_pred ccchhhhHHHHHHHHHHHHHHHHHHHHHHHHh--hcchhHHHHHHHHHHH
Q 011783 310 NYSTQMVGEVLAITGFSLLVFQLSLYPFLERI--LGPIMVARIAGVLTIP 357 (477)
Q Consensus 310 g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~~~~~~ 357 (477)
|.+.........+........+..++.++.++ .+++. +.-|.++..+
T Consensus 153 g~~~~~~~~~igivs~i~~~~G~~lG~~~~~~~~~g~~a-~igGliLI~i 201 (206)
T TIGR02840 153 GLNPLATSILVAVMSFIFVSLGLFLGKKISKKSIIGKFS-FLSGILLILL 201 (206)
T ss_pred CccHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhccchH-HHHHHHHHHH
Confidence 44444444444444444444333345555544 34444 4444444433
No 321
>PRK10263 DNA translocase FtsK; Provisional
Probab=44.92 E-value=4.3e+02 Score=29.79 Aligned_cols=18 Identities=11% Similarity=-0.123 Sum_probs=11.6
Q ss_pred HHHHHHhhhHHHHHHHHh
Q 011783 420 SLFKAAGPAGGGALFSWA 437 (477)
Q Consensus 420 ~~g~~~~~~~~g~l~~~~ 437 (477)
..|+++|..+...+...+
T Consensus 141 ~gGGIIG~lLs~lL~~Lf 158 (1355)
T PRK10263 141 ASGGVIGSLLSTTLQPLL 158 (1355)
T ss_pred cccchHHHHHHHHHHHHH
Confidence 346667777666666665
No 322
>KOG1277 consensus Endosomal membrane proteins, EMP70 [Intracellular trafficking, secretion, and vesicular transport]
Probab=43.73 E-value=1.6e+02 Score=28.38 Aligned_cols=31 Identities=35% Similarity=0.371 Sum_probs=21.9
Q ss_pred hHHHHHHHHHHHHHHhhhhhhhhh----hc-CCchh
Q 011783 84 AGYVGSSFMFGRALTSVFWGLVAD----RY-GRKPV 114 (477)
Q Consensus 84 ~g~~~s~~~~~~~~~~~~~G~l~D----r~-Grr~~ 114 (477)
-|-+.+...+.+++.+++.|+.+. |. |||++
T Consensus 325 rGal~saaI~vYAlTs~i~GY~~gs~Y~r~gG~~Wi 360 (593)
T KOG1277|consen 325 RGALLSAAIVVYALTSPINGYVSGSFYARLGGRRWI 360 (593)
T ss_pred chHHHHHHHHHHHhcccccccccceeeehhccHHHH
Confidence 466677777888888888888765 45 45544
No 323
>COG3619 Predicted membrane protein [Function unknown]
Probab=43.41 E-value=2.2e+02 Score=24.69 Aligned_cols=112 Identities=15% Similarity=0.124 Sum_probs=51.0
Q ss_pred hHHHHHHHHHHHHHHhhhhhhhhhhcCC-chhhHH--HHHHHHHHHHHHHh----hhhHHHHHHHHHHhh----------
Q 011783 84 AGYVGSSFMFGRALTSVFWGLVADRYGR-KPVIIM--GTASVVIFNTLFGL----SVNFWMAVLTRFLLG---------- 146 (477)
Q Consensus 84 ~g~~~s~~~~~~~~~~~~~G~l~Dr~Gr-r~~~~~--~~~~~~i~~~~~~~----~~~~~~l~~~r~l~G---------- 146 (477)
.........+...++......+..|..| ..+... +.++........++ +++....+..-+..|
T Consensus 57 ~a~~~~~pii~Fv~Gv~~~~~~~r~~~~~~~~~l~~~~~ll~~~v~~~~~~~p~~~~~~~~~il~~f~mg~Qnasf~k~~ 136 (226)
T COG3619 57 LAVLLLLPILAFVLGVAAAELISRRATRSFIPVLLLVSLLLALIALLALGFIPESSPDFVAVILVAFAMGIQNASFRKVG 136 (226)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHhcccccchHHHHHHHHHHHHHHHHHHHHHhc
Confidence 4556666667777775555555555554 222222 22222222223332 235544444444444
Q ss_pred -hcccchhh------HHHHhhhhccccch-hhHHHHHHHHhHHHHHHHHhHHHHhhh
Q 011783 147 -SLNGLLGP------IKAYACEIFREEHQ-ALGLSTVSTAWGIGLIIGPALGGFLAQ 195 (477)
Q Consensus 147 -~~~g~~~~------~~~~i~~~~~~~~r-~~~~~~~~~~~~~g~~~g~~~~~~l~~ 195 (477)
...+.... ...-+.++...|+. -..-...+...-.+.++|...++++..
T Consensus 137 g~~~~~t~~TGnl~~~~~~l~~~l~~k~~~~~~~~~~~~~~il~f~~GAi~g~ll~~ 193 (226)
T COG3619 137 GAPYGTTYVTGNLKSAGRGLGRYLSGKDKEKLRDWLIYLSLILSFIVGAICGALLTL 193 (226)
T ss_pred CccccchhhhhhHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33332111 11223444443322 222334455555666666666666665
No 324
>PF02632 BioY: BioY family; InterPro: IPR003784 BioMNY proteins are considered to constitute tripartite biotin transporters in prokaryotes. One-third of the widespread bioY genes are linked to bioMN. Many bioY genes are located at loci encoding biotin biosynthesis, while others are unlinked to biotin metabolic or transport genes. BioY is a high-capacity transporter that is converted to a high-affinity system in the presence of BioMN. BioMNY-mediated biotin uptake is severely impaired by the replacement of the Walker A lysine residue in BioM, demonstrating the dependency of high-affinity transport on a functional ATPase [].
Probab=42.62 E-value=1.3e+02 Score=24.08 Aligned_cols=42 Identities=17% Similarity=0.333 Sum_probs=28.0
Q ss_pred HHHHHHHHHHHhhhhhhhhhhcCCchhhHHHHHHHHHHHHHH
Q 011783 88 GSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLF 129 (477)
Q Consensus 88 ~s~~~~~~~~~~~~~G~l~Dr~Grr~~~~~~~~~~~i~~~~~ 129 (477)
+.-|.+++.+...+.|++.+|..+++......+...++.+.+
T Consensus 59 TgGyl~gf~~~a~i~g~~~~~~~~~~~~~~~~~~~~~g~~ii 100 (148)
T PF02632_consen 59 TGGYLLGFPLAALIIGLLAERLKRSRSFLRLILAMLVGLLII 100 (148)
T ss_pred CChHHHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHHHHH
Confidence 355778888999999999999988753333333333343333
No 325
>PRK11469 hypothetical protein; Provisional
Probab=41.76 E-value=1.6e+02 Score=24.60 Aligned_cols=76 Identities=16% Similarity=0.091 Sum_probs=42.5
Q ss_pred chhHHHHHHHHHHHhhhchhchHhHHHHHHHHhcccccchhhhhhhHHHHHHHHH-HHHHHhhhhhhhhhhcCCchhhHH
Q 011783 39 PITELFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMF-GRALTSVFWGLVADRYGRKPVIIM 117 (477)
Q Consensus 39 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~g~~~s~~~~-~~~~~~~~~G~l~Dr~Grr~~~~~ 117 (477)
..+....+.++..++.+..+.-.... |.+.-. ......+..+ ....+..+..++.+++|||.-++-
T Consensus 104 ~~~~~l~LaiAtSiDAlavGi~~~~~-------g~~~~~------~~~~ig~~s~~~~~~G~~lG~~~g~~~g~~a~~lg 170 (188)
T PRK11469 104 GFWLLVTTAIATSLDAMAVGVGLAFL-------QVNIIA------TALAIGCATLIMSTLGMMVGRFIGSIIGKKAEILG 170 (188)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHh-------hhhHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34566777777777777655543322 222222 2333333322 333344455566677888888888
Q ss_pred HHHHHHHHHH
Q 011783 118 GTASVVIFNT 127 (477)
Q Consensus 118 ~~~~~~i~~~ 127 (477)
+.++..++.-
T Consensus 171 G~iLI~iGi~ 180 (188)
T PRK11469 171 GLVLIGIGVQ 180 (188)
T ss_pred HHHHHHHHHH
Confidence 8887777654
No 326
>PF06912 DUF1275: Protein of unknown function (DUF1275); InterPro: IPR010699 This family consists of several hypothetical bacterial proteins of around 200 residues in length. The function of this family is unknown although a few members are thought to be membrane proteins.
Probab=40.29 E-value=2.3e+02 Score=24.05 Aligned_cols=170 Identities=18% Similarity=0.167 Sum_probs=0.0
Q ss_pred chhHHHHHHHHHHHhhhch--------hchHhHHHHHHHHhcccccchhhhhhhHHHHHHHHHHHHHHhhhhhhh---hh
Q 011783 39 PITELFSIWIIVLCTALPI--------SSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLV---AD 107 (477)
Q Consensus 39 ~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~s~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l---~D 107 (477)
.+-.+.+.+.+.+++..+. +..+--.-.+..++.-.+.. ..........++.+|....+.+ .+
T Consensus 1 ~~l~~lLtf~aG~iDa~~fl~~~~~F~s~~TGN~v~l~~~l~~~~~~------~~~~~~~~i~~F~~G~~~~~~i~~~~~ 74 (209)
T PF06912_consen 1 ARLALLLTFIAGFIDAYSFLALGGVFVSFMTGNTVFLGVALAQGDWS------GALRYLLAILSFILGAFLAGLIVRRSR 74 (209)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHhchHHHHhHHHHHHHHHHHhCCcHH------HHHHHHHHHHHHHHHHHHHHHHHHhcc
Q ss_pred hcCCchhhHHHHHHHHHHHHHHHhhhhHHHH----HHHHHHhhhcccchhhH-H--------------------HHhhhh
Q 011783 108 RYGRKPVIIMGTASVVIFNTLFGLSVNFWMA----VLTRFLLGSLNGLLGPI-K--------------------AYACEI 162 (477)
Q Consensus 108 r~Grr~~~~~~~~~~~i~~~~~~~~~~~~~l----~~~r~l~G~~~g~~~~~-~--------------------~~i~~~ 162 (477)
|..+|+.....+.+-.+..+...+.+....- .+.-.+..+..|..... . .-+.|.
T Consensus 75 ~~~~~~~~~~~l~~~~~ll~~~~~~~~~~~~~~~~~~~~~~lafamg~Qn~~~~~~~g~~~~Tt~~TG~l~~~~~~l~~~ 154 (209)
T PF06912_consen 75 RRRRRRWYRILLLLEAILLLIAALLPPAFPPHGHRILAIFLLAFAMGMQNAAFRRLGGVSIRTTFMTGNLTDLGIDLARY 154 (209)
T ss_pred ccchhHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHHHHHcCCCcccchhhHhhHHHHHHHHHHH
Q ss_pred ccccchhhHHHHHHHHhHHHHHHHHhHHHHhhhccccCCcccccccccccccchHHHHHHHHHhh
Q 011783 163 FREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSESLFGKFPYFLPCLCISLFAF 227 (477)
Q Consensus 163 ~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 227 (477)
...+++.+.-.......-++..+|..+++.+.+ .++....+ .+..+......
T Consensus 155 ~~~~~~~~~~~~~~~~~i~~f~~Ga~~ga~l~~-------~~~~~al~------~~~~~l~~~~~ 206 (209)
T PF06912_consen 155 LRGKDRALRRALRYLLIILSFFIGAILGALLYR-------RLGFWALL------LPALLLLLLAL 206 (209)
T ss_pred HhCCchhHHHHHHHHHHHHHHHHHHHHHHHHHH-------HHhhHHHH------HHHHHHHHHHH
No 327
>PF02990 EMP70: Endomembrane protein 70; InterPro: IPR004240 The transmembrane 9 superfamily protein (TM9SF) may function as a channel or small molecule transporter. Proteins in this group are endosomal integral membrane proteins.; GO: 0016021 integral to membrane
Probab=39.56 E-value=4.1e+02 Score=26.66 Aligned_cols=27 Identities=7% Similarity=0.148 Sum_probs=15.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhcc
Q 011783 317 GEVLAITGFSLLVFQLSLYPFLERILGP 344 (477)
Q Consensus 317 g~~~~~~~~~~~~~~~~~~~~l~~~~~~ 344 (477)
........+.+.+++. .++++-+.++.
T Consensus 300 t~~i~~y~~~~~iaGy-~S~~~yk~~~g 326 (521)
T PF02990_consen 300 TAAIILYALTSFIAGY-VSARLYKSFGG 326 (521)
T ss_pred HHHHHHHHHHhhHHHH-HHHHHHHHcCC
Confidence 3344455566666666 66677666653
No 328
>PF10785 NADH-u_ox-rdase: NADH-ubiquinone oxidoreductase complex I, 21 kDa subunit; InterPro: IPR019721 This domain is found in the N-terminal region of NADH-ubiquinone oxidoreductase 21kDa subunits from plants and fungi [].
Probab=36.92 E-value=1.5e+02 Score=21.03 Aligned_cols=42 Identities=17% Similarity=0.120 Sum_probs=29.7
Q ss_pred HHHHHhhhhhhhhhhcCC-------chhhHHHHHHHHHHHHHHHhhhhH
Q 011783 94 GRALTSVFWGLVADRYGR-------KPVIIMGTASVVIFNTLFGLSVNF 135 (477)
Q Consensus 94 ~~~~~~~~~G~l~Dr~Gr-------r~~~~~~~~~~~i~~~~~~~~~~~ 135 (477)
+.....+.++++.+|.-+ ++.+..+.++...+.++++..+|.
T Consensus 30 ~~ta~~p~~~~~~~~~~~~~~~~~~~~~~~~a~~ig~~gGfl~ayqrS~ 78 (86)
T PF10785_consen 30 GATAASPPLGYYMERSAPSRVGRGGGPAMRLAGAIGFFGGFLLAYQRSS 78 (86)
T ss_pred HHHHHHHHHHHHHhcccccccccccchHHHHHHHHHHHHHHHHHHHHhh
Confidence 334555667777777654 778888888888888888876653
No 329
>PF02535 Zip: ZIP Zinc transporter; InterPro: IPR003689 These ZIP zinc transporter proteins define a family of metal ion transporters that are found in plants, protozoa, fungi, invertebrates, and vertebrates, making it now possible to address questions of metal ion accumulation and homeostasis in diverse organisms [].; GO: 0046873 metal ion transmembrane transporter activity, 0030001 metal ion transport, 0055085 transmembrane transport, 0016020 membrane
Probab=32.84 E-value=3.8e+02 Score=24.40 Aligned_cols=32 Identities=22% Similarity=0.199 Sum_probs=16.5
Q ss_pred HHHHHHHHHhhhcccc-hhhH-HHHhhhhccccc
Q 011783 136 WMAVLTRFLLGSLNGL-LGPI-KAYACEIFREEH 167 (477)
Q Consensus 136 ~~l~~~r~l~G~~~g~-~~~~-~~~i~~~~~~~~ 167 (477)
..-.+--.+.+++.|. .+.+ .-++.|....++
T Consensus 261 ~~~~~~~~~~a~aaG~~lyv~~~ell~~~~~~~~ 294 (317)
T PF02535_consen 261 SSDIVSGILLAFAAGTFLYVAFVELLPEEFHNKH 294 (317)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCc
Confidence 3334444566666555 3444 455566555443
No 330
>PF06341 DUF1056: Protein of unknown function (DUF1056); InterPro: IPR009406 This entry is represented by Bacteriophage bIL286, Orf42. The characteristics of the protein distribution suggest prophage matches in addition to the phage matches. This family consists of several putative head-tail joining bacteriophage proteins.
Probab=32.17 E-value=1.1e+02 Score=20.12 Aligned_cols=37 Identities=8% Similarity=0.028 Sum_probs=22.3
Q ss_pred hhHHHHHHHHHHhhhcccchhhHHHHhhhhccccchh
Q 011783 133 VNFWMAVLTRFLLGSLNGLLGPIKAYACEIFREEHQA 169 (477)
Q Consensus 133 ~~~~~l~~~r~l~G~~~g~~~~~~~~i~~~~~~~~r~ 169 (477)
-++..+..-...-++..+.......+++|..+++++|
T Consensus 26 i~it~F~~n~~~g~i~i~I~l~l~G~isE~i~~~Kgg 62 (63)
T PF06341_consen 26 INITAFLINQIAGLISIGITLFLAGLISEFISKQKGG 62 (63)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCC
Confidence 3445555555555555555555577888888875543
No 331
>PF07456 Hpre_diP_synt_I: Heptaprenyl diphosphate synthase component I; InterPro: IPR010898 This family contains component I of bacterial heptaprenyl diphosphate synthase (2.5.1.30 from EC) (approximately 170 residues long). This is one of the two dissociable subunits that form the enzyme, both of which are required for the catalysis of the biosynthesis of the side chain of menaquinone-7 [].
Probab=29.14 E-value=2.5e+02 Score=22.47 Aligned_cols=51 Identities=12% Similarity=0.161 Sum_probs=35.8
Q ss_pred HHHHHHHHHHhhhhhhhhhhcCCchhhHHHHHHHHHHHHHHHhhhhHHHHHHHHHHh
Q 011783 89 SSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLSVNFWMAVLTRFLL 145 (477)
Q Consensus 89 s~~~~~~~~~~~~~G~l~Dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~l~~~r~l~ 145 (477)
-.+.++..+.+...=.+..|..||+.-.++.-+ ..+.++|..|+++++++.
T Consensus 68 f~~Sl~Ggl~S~~vM~ll~~~~~~~~S~~giSi------~Gai~HN~gQl~va~~i~ 118 (148)
T PF07456_consen 68 FLFSLAGGLLSLLVMALLKKLFKKKFSLIGISI------AGAIAHNIGQLIVASLII 118 (148)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCCccHHHHHH------HHHHHHHHHHHHHHHHHH
Confidence 456667777777888888888887765555433 335678888888887654
No 332
>cd02437 CCC1_like_1 CCC1-related protein family. CCC1_like_1: This is a protein family closely related to CCC1, a family of proteins involved in iron and manganese transport. Yeast CCC1 is a vacuole transmembrane protein responsible for the iron and manganese accumulation in vacuole.
Probab=29.00 E-value=2.5e+02 Score=23.12 Aligned_cols=48 Identities=21% Similarity=0.154 Sum_probs=24.2
Q ss_pred hchHhHHHHHHHHhcccccchhhhhhhHHHHHHHHHHHHHHhhhhhhhhhhcCCchhhHHH
Q 011783 58 SSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMG 118 (477)
Q Consensus 58 ~~~~~~~~~~~~~~~~s~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~Grr~~~~~~ 118 (477)
+...|++|++..+. . ..+..++.. ..+.-...|...-|+.+++...-.
T Consensus 107 G~llPLlp~~~~~~-----~------~a~~~si~~--~~~~L~~~G~~~~~~~~~~~~~~~ 154 (175)
T cd02437 107 GGLLPLLPFLPFDL-----W------LAAGIAVAI--VLAILFILGLVIGKISKINVAISF 154 (175)
T ss_pred HHHHHHHHHHHhhh-----H------HHHHHHHHH--HHHHHHHHHHHHHHHcCCChHHHH
Confidence 45668888764332 1 222222221 334445566777777666554333
No 333
>TIGR02230 ATPase_gene1 F0F1-ATPase subunit, putative. This model represents a protein found encoded in F1F0-ATPase operons in several genomes, including Methanosarcina barkeri (archaeal) and Chlorobium tepidum (bacterial). It is a small protein (about 100 amino acids) with long hydrophic stretches and is presumed to be a subunit of the enzyme.
Probab=27.20 E-value=2.6e+02 Score=20.61 Aligned_cols=30 Identities=23% Similarity=0.189 Sum_probs=15.5
Q ss_pred HHHhhhhhhhhhh-cCCchhhHHHHHHHHHH
Q 011783 96 ALTSVFWGLVADR-YGRKPVIIMGTASVVIF 125 (477)
Q Consensus 96 ~~~~~~~G~l~Dr-~Grr~~~~~~~~~~~i~ 125 (477)
.+...+.|...|+ +|-++.+.+.+++.++.
T Consensus 56 il~G~~lG~WLD~~~~t~~~~tl~~lllGv~ 86 (100)
T TIGR02230 56 TLLGVAVGIWLDRHYPSPFSWTLTMLIVGVV 86 (100)
T ss_pred HHHHHHHHHHHHhhcCCCcHHHHHHHHHHHH
Confidence 3444555566664 67666555544444433
No 334
>PF07857 DUF1632: CEO family (DUF1632); InterPro: IPR012435 These sequences are found in hypothetical eukaryotic proteins of unknown function. The region concerned is approximately 280 residues long.
Probab=26.99 E-value=2e+02 Score=25.48 Aligned_cols=24 Identities=21% Similarity=0.348 Sum_probs=11.3
Q ss_pred hHHHHHHHHHHHhhhchhchHhHH
Q 011783 41 TELFSIWIIVLCTALPISSLFPFL 64 (477)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~~ 64 (477)
+++.-+.++.+...+-.....|..
T Consensus 180 ~RivG~~LAv~aGvlyGs~fvPv~ 203 (254)
T PF07857_consen 180 KRIVGIILAVFAGVLYGSNFVPVI 203 (254)
T ss_pred chhHhHHHHHHHHHHHhcccchHH
Confidence 345555555554444444444443
No 335
>COG4262 Predicted spermidine synthase with an N-terminal membrane domain [General function prediction only]
Probab=26.02 E-value=5.7e+02 Score=24.17 Aligned_cols=94 Identities=12% Similarity=0.018 Sum_probs=58.6
Q ss_pred hHHHHHHHHh-cccccchhhhhhhHHHHHHHHHHHHHHhhhhhhhhhhcCCchhhHHHHHHHHHH----HHHH-Hhh---
Q 011783 62 PFLYFMIKDF-QIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIF----NTLF-GLS--- 132 (477)
Q Consensus 62 ~~~~~~~~~~-~~s~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~Grr~~~~~~~~~~~i~----~~~~-~~~--- 132 (477)
-.+..+...+ |-+--| .+++.+.|.....+|+...-++.|.--.-+.+..-.++..++ .++. .|+
T Consensus 28 lal~tLatyLlG~~Ilq------~S~Iia~yl~amGlGs~~sry~~dd~~~~~Fv~vElllgligg~Sa~~ly~~FA~~~ 101 (508)
T COG4262 28 LALGTLATYLLGGGILQ------TSLIIAGYLAAMGLGSLLSRYVLDDAALARFVDVELLLGLIGGVSAAALYLLFALES 101 (508)
T ss_pred HHHHHHHHHhcCCceee------hHHHHHHHHHHhchhhhhhccccCchHHHHHHHHHHHHHHhccchHHHHHHHHHhcc
Confidence 3444455554 455566 899999999999999988888777533332222222222221 1121 233
Q ss_pred -hhHHHHHHHHHHhhhcccchhhH-HHHhhh
Q 011783 133 -VNFWMAVLTRFLLGSLNGLLGPI-KAYACE 161 (477)
Q Consensus 133 -~~~~~l~~~r~l~G~~~g~~~~~-~~~i~~ 161 (477)
++-+.+++.-++.|.-.|.-.|. +.++..
T Consensus 102 ~~~~~Vly~lt~vIG~LVG~EiPL~mrml~~ 132 (508)
T COG4262 102 APSRLVLYALTAVIGVLVGAEIPLLMRMLQR 132 (508)
T ss_pred chHHHHHHHHHHHHHHHHhcchHHHHHHHHH
Confidence 35677888888999888887787 776655
No 336
>COG2962 RarD Predicted permeases [General function prediction only]
Probab=25.59 E-value=5.1e+02 Score=23.46 Aligned_cols=80 Identities=14% Similarity=-0.009 Sum_probs=39.7
Q ss_pred hhhhhhcchhhHHHHHHHHHHHhhhhhhHHHHHHhhcCcccCCccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Q 011783 265 PKKSLLKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGP 344 (477)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~ 344 (477)
..+++.|+|+.+............+.. .|...+ .+-...++++-.-++.+.+++.+. -++.+|..|
T Consensus 61 ~~~~~~~~p~~~~~~~l~a~li~~nW~------lfiWAv-----n~g~~leaSLGY~InPL~~VllG~---lflkErls~ 126 (293)
T COG2962 61 ELKQLLKQPKTLLMLALTALLIGLNWW------LFIWAV-----NNGHVLEASLGYFINPLVNVLLGR---LFLKERLSR 126 (293)
T ss_pred HHHHHHhCcHHHHHHHHHHHHHHHHHH------Hhheec-----CCCchhHHHhHHHHHHHHHHHHHH---HHHHhhccH
Confidence 344467777665554444433222211 222222 122233444444455566655433 366788887
Q ss_pred hhHHHHHHHHHHHH
Q 011783 345 IMVARIAGVLTIPL 358 (477)
Q Consensus 345 ~~~~~~~~~~~~~~ 358 (477)
.....++....++.
T Consensus 127 ~Q~iAV~lA~~GV~ 140 (293)
T COG2962 127 LQWIAVGLAAAGVL 140 (293)
T ss_pred HHHHHHHHHHHHHH
Confidence 77766665555444
No 337
>TIGR00801 ncs2 uracil-xanthine permease. NCS2 family appears to be distantly related to the NCS1 family (TC #2.A.39).
Probab=25.16 E-value=6.3e+02 Score=24.39 Aligned_cols=97 Identities=9% Similarity=0.035 Sum_probs=53.3
Q ss_pred HHhcccccchhhhhhhHHHHHHHHHHHHHHhhhhhhhhhhcCCchhhHHHHHHHHHHHHHHHhhhhHHHHHHHHHHhhhc
Q 011783 69 KDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLSVNFWMAVLTRFLLGSL 148 (477)
Q Consensus 69 ~~~~~s~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~l~~~r~l~G~~ 148 (477)
... .++++ ...+.+...+...++.++-+....+.-|-+........+...........++.....+-++.|+.
T Consensus 31 ~~~-l~~~~------~~~li~at~~~sgi~Tllq~~~~~~~~~lp~~~G~sfa~i~~~~~~~~~~~~~~~~g~~i~~gl~ 103 (415)
T TIGR00801 31 LAP-LSAEQ------TQYLVSISLLTSGIGTLLQLFRTGGQIGLPSYLGSSFAFVSPMIAIGSGLGIPAIMGALIATGLV 103 (415)
T ss_pred ccc-CCHHH------HHHHHHHHHHHHHHHHHHHHhhhcCceeeeeeecCcHHHHHHHHHHHhccCHHHHHHHHHHHHHH
Confidence 445 77777 88888888899999999988877654222332222212221222222222444444444555554
Q ss_pred ccchhhH-----HHHhhhhccccchhhHH
Q 011783 149 NGLLGPI-----KAYACEIFREEHQALGL 172 (477)
Q Consensus 149 ~g~~~~~-----~~~i~~~~~~~~r~~~~ 172 (477)
....... ...+.+.+|+.-.+...
T Consensus 104 ~~ll~~~~~~~~~~~i~~~~Pp~v~g~iv 132 (415)
T TIGR00801 104 YTLLSLLIKKLGPRWLMKLFPPVVTGPVV 132 (415)
T ss_pred HHHHHHHHHHhhHHHHHhcCCchhHHHhH
Confidence 4443331 23557788887766543
No 338
>PF11947 DUF3464: Protein of unknown function (DUF3464); InterPro: IPR021855 This family of proteins are functionally uncharacterised. This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 137 to 196 amino acids in length.
Probab=23.12 E-value=1.8e+02 Score=23.42 Aligned_cols=29 Identities=21% Similarity=0.405 Sum_probs=25.8
Q ss_pred hHHHHHHHHHHHHHHhhhhhhhhhhcCCc
Q 011783 84 AGYVGSSFMFGRALTSVFWGLVADRYGRK 112 (477)
Q Consensus 84 ~g~~~s~~~~~~~~~~~~~G~l~Dr~Grr 112 (477)
+.++.+...++..+..+-.|.|+-.+...
T Consensus 98 ~~~~~S~~~Fg~gllGisYGilSaSWD~~ 126 (153)
T PF11947_consen 98 AVLLVSLVFFGLGLLGISYGILSASWDPE 126 (153)
T ss_pred HHHHHHHHHHHHHHHhhhhhhcccccCCC
Confidence 78888999999999999999999999765
No 339
>PF04281 Tom22: Mitochondrial import receptor subunit Tom22 ; InterPro: IPR005683 The mitochondrial protein translocase family, which is responsible for movement of nuclear encoded pre-proteins into mitochondria, is very complex with at least 19 components. These proteins include several chaperone proteins, four proteins of the outer membrane translocase (Tom) import receptor, five proteins of the Tom channel complex, five proteins of the inner membrane translocase (Tim) and three "motor" proteins. This family represents the Tom22 proteins []. The N-terminal region of Tom22 has been shown to have chaperone-like activity, and the C-terminal region faces the intermembrane face []. ; GO: 0006886 intracellular protein transport, 0005741 mitochondrial outer membrane
Probab=23.05 E-value=3.8e+02 Score=21.12 Aligned_cols=25 Identities=16% Similarity=0.012 Sum_probs=19.1
Q ss_pred HhhcCCcchhhHHhHHHHHHHHHHH
Q 011783 399 QNRAVDQDQRGAANGIAMTGMSLFK 423 (477)
Q Consensus 399 ~~~~~~~~~~g~~~g~~~~~~~~g~ 423 (477)
+.+++|+..|..+.+..+.......
T Consensus 60 Lkdi~P~~~R~~i~~~~~~~~~~~k 84 (137)
T PF04281_consen 60 LKDIFPPSVRNWISSTVSTTSSAVK 84 (137)
T ss_pred HhccCCHHHHHHHHHHHHHHHHHHH
Confidence 5688999999998888776555443
No 340
>COG2836 Uncharacterized conserved protein [Function unknown]
Probab=22.40 E-value=5.2e+02 Score=22.42 Aligned_cols=43 Identities=21% Similarity=0.117 Sum_probs=26.8
Q ss_pred cchhhhHHHHHHHHHHHHHHHHHHHHHHHHhhc---chhHHHHHHHH
Q 011783 311 YSTQMVGEVLAITGFSLLVFQLSLYPFLERILG---PIMVARIAGVL 354 (477)
Q Consensus 311 ~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~---~~~~~~~~~~~ 354 (477)
-|+.+-+..+..++++....-+ ..+..++++. |++..+.+..+
T Consensus 161 gS~~~Gal~mlaFGlGTlP~ll-~~G~~s~~~s~~~r~~~~rl~~gl 206 (232)
T COG2836 161 GSAFEGALVMLAFGLGTLPNLL-AMGIFSSKLSKSSRKRLNRLSGGL 206 (232)
T ss_pred CCHHHHHHHHHHHhhcccHHHH-HHHHHHHHHHHHHHHHHHHHHhHH
Confidence 4677777778888887776655 6666666553 44444444433
No 341
>PF11085 YqhR: Conserved membrane protein YqhR; InterPro: IPR024563 This family of proteins is conserved in the Bacillaceae family of the Firmicutes. Their function is not known.
Probab=21.76 E-value=4.6e+02 Score=21.55 Aligned_cols=69 Identities=14% Similarity=0.157 Sum_probs=39.2
Q ss_pred hHHHHHHH--HHHHHHHhhhhhhhhhhc-CCchhhHHHHHHHHHHHHHHH-hh-----------hhHHHHHHHHHHhhhc
Q 011783 84 AGYVGSSF--MFGRALTSVFWGLVADRY-GRKPVIIMGTASVVIFNTLFG-LS-----------VNFWMAVLTRFLLGSL 148 (477)
Q Consensus 84 ~g~~~s~~--~~~~~~~~~~~G~l~Dr~-Grr~~~~~~~~~~~i~~~~~~-~~-----------~~~~~l~~~r~l~G~~ 148 (477)
.|.+.++. .+-+.+.+++.-.+-.|+ |.-+-++.|++.+++...+.. +. +++..-+....+-|++
T Consensus 68 ~G~~igi~~~gv~Si~aAllY~~~l~k~~g~W~Gi~YG~~~W~ivF~~lnP~fp~~~~~~~l~~nTiiT~~CiyiLyGlF 147 (173)
T PF11085_consen 68 LGNLIGIVFIGVFSIVAALLYYALLKKFKGPWPGILYGLAWWAIVFFVLNPIFPMIKPVTELDWNTIITTLCIYILYGLF 147 (173)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHhcccccCChhhhhCchhHHHHHHHHHHHHHHH
Confidence 44444443 333455555555555554 666678888888777665551 11 2444445556777877
Q ss_pred ccch
Q 011783 149 NGLL 152 (477)
Q Consensus 149 ~g~~ 152 (477)
.|..
T Consensus 148 IGYS 151 (173)
T PF11085_consen 148 IGYS 151 (173)
T ss_pred hcee
Confidence 6653
No 342
>PF02694 UPF0060: Uncharacterised BCR, YnfA/UPF0060 family; InterPro: IPR003844 This entry describes integral membrane proteins of unknown function.; GO: 0016020 membrane
Probab=21.66 E-value=1.8e+02 Score=21.60 Aligned_cols=49 Identities=20% Similarity=0.187 Sum_probs=37.6
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHH
Q 011783 314 QMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTIPLLTSYP 363 (477)
Q Consensus 314 ~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 363 (477)
...|-..+.++-..++.++ +.++..|+..+.+-=..|..++.++..++.
T Consensus 54 ~~fGRvYAAYGGvfI~~Sl-~W~w~vdg~~Pd~~D~iGa~i~L~G~~iI~ 102 (107)
T PF02694_consen 54 AAFGRVYAAYGGVFIVASL-LWGWLVDGVRPDRWDWIGAAICLVGVAIIL 102 (107)
T ss_pred ccchhHHHHhhhhHHHHHH-HHHhhhcCcCCChHHHHhHHHHHHhHHheE
Confidence 4567788888888888888 889999998877777777777766655543
No 343
>KOG1397 consensus Ca2+/H+ antiporter VCX1 and related proteins [Inorganic ion transport and metabolism]
Probab=21.04 E-value=1.8e+02 Score=27.37 Aligned_cols=39 Identities=10% Similarity=0.105 Sum_probs=24.3
Q ss_pred chhHHHHHHHHHHHhhhchhchHhHHHHHHHHhcccccc
Q 011783 39 PITELFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKRE 77 (477)
Q Consensus 39 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~ 77 (477)
+|+.+.++....++..+........+....++++++...
T Consensus 288 ~~ss~~~L~~~T~~vsllaeyLV~~Id~~~ds~~ls~~F 326 (441)
T KOG1397|consen 288 RWSSIIWLLIMTLLVSLLAEYLVDTIDDVSDSWGLSVKF 326 (441)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhh
Confidence 345555555555555555555555566777788888776
Done!