BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 011785
(477 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8GUN5|PHL1_ARATH Protein PHR1-LIKE 1 OS=Arabidopsis thaliana GN=PHL1 PE=1 SV=1
Length = 413
Score = 298 bits (762), Expect = 7e-80, Method: Compositional matrix adjust.
Identities = 185/380 (48%), Positives = 244/380 (64%), Gaps = 28/380 (7%)
Query: 17 NNLGVSGPMSSSLSVLPTPLEDTYSKLPNSQQVYMEQELRTRPLAPAPHIPANSGVVGHI 76
N+ G S MSSS S L T +ED Y KLPNS V QEL P+ NSG G++
Sbjct: 5 NDFGYSTAMSSSYSALHTSVEDRYHKLPNSFWVSSGQELMNNPVPCQSVSGGNSG--GYL 62
Query: 77 FSSSSGLSSDLQYSSASPHEKLPRTTSFISQSSTPIPQTSHSGLP---QSSTSSHYTKES 133
F SSSG + S+ PH + + +S + P + + P QSS +H+ +E
Sbjct: 63 FPSSSGYCN---VSAVLPHGRNLQNQPPVS--TVPRDRLAMQDCPLIAQSSLINHHPQE- 116
Query: 134 SSSWCPESLPGYVDFAANTPVQNSQMEGSSCSGAIV--SEEFSKRNDWHEWADQLITDDD 191
+ L + DF+ + PVQN Q E S G V S E K+++W +WADQLI+ DD
Sbjct: 117 ----FIDPLHEFFDFSDHVPVQNLQAESS---GVRVDSSVELHKKSEWQDWADQLISVDD 169
Query: 192 PLGSSWNEILADTSMTEMEPKMSYQVPKTPTSMPAHRTQVHQQLPASSTEIRTVVTPSAS 251
+W+E+L D+S P + ++P +P +QQ S+E + + ++S
Sbjct: 170 GSEPNWSELLGDSS--SHNP--NSEIPTPFLDVPRLDITANQQQQMVSSEDQ-LSGRNSS 224
Query: 252 ANNAPAKPRMRWTPELHEAFVEAVNQLGGSERATPKGVLKLMKVEGLTIYHVKSHLQKYR 311
++ A +K RMRWTPELHEAFVEAVNQLGGSERATPK VLKL+ GLTIYHVKSHLQKYR
Sbjct: 225 SSVATSKQRMRWTPELHEAFVEAVNQLGGSERATPKAVLKLLNNPGLTIYHVKSHLQKYR 284
Query: 312 TARYRPDSSEGSS---EKRLTPLEEISSLDLKTGIEITEALRLQMEVQKRLHEQLEIQRN 368
TARY+P++SE + EK++T +E+I SLD+KT +EIT+ALRLQMEVQKRLHEQLEIQR+
Sbjct: 285 TARYKPETSEVTGEPQEKKMTSIEDIKSLDMKTSVEITQALRLQMEVQKRLHEQLEIQRS 344
Query: 369 LQLRIEEQGKYLQMMFEKQK 388
LQL+IE+QG+YLQMMFEKQ+
Sbjct: 345 LQLQIEKQGRYLQMMFEKQQ 364
>sp|Q9SAK5|APL_ARATH Myb family transcription factor APL OS=Arabidopsis thaliana GN=APL
PE=2 SV=2
Length = 358
Score = 138 bits (347), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 69/135 (51%), Positives = 95/135 (70%), Gaps = 9/135 (6%)
Query: 258 KPRMRWTPELHEAFVEAVNQLGGSERATPKGVLKLMKVEGLTIYHVKSHLQKYRTAR--- 314
KPR+RWT ELHE FV+AV QLGG ++ATPK ++++M V+GLT+YH+KSHLQK+R +
Sbjct: 34 KPRLRWTVELHERFVDAVAQLGGPDKATPKTIMRVMGVKGLTLYHLKSHLQKFRLGKQPH 93
Query: 315 --YRPDSS-EGSSEKRLTPLEEISSLDLKTGIEITEALRLQMEVQKRLHEQLEIQRNLQL 371
Y S+ EGS + ++S +G+ +QMEVQ+RLHEQLE+QR+LQL
Sbjct: 94 KEYGDHSTKEGSRASAMDIQRNVAS---SSGMMSRNMNEMQMEVQRRLHEQLEVQRHLQL 150
Query: 372 RIEEQGKYLQMMFEK 386
RIE QGKY+Q + E+
Sbjct: 151 RIEAQGKYMQSILER 165
>sp|Q700D9|MYBF_ARATH Putative Myb family transcription factor At1g14600 OS=Arabidopsis
thaliana GN=At1g14600 PE=2 SV=2
Length = 255
Score = 89.4 bits (220), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 39/56 (69%), Positives = 46/56 (82%)
Query: 259 PRMRWTPELHEAFVEAVNQLGGSERATPKGVLKLMKVEGLTIYHVKSHLQKYRTAR 314
PR+RWTPELH +FV AV+ LGG +ATPK VLK+M V+GLTI HVKSHLQ YR +R
Sbjct: 24 PRLRWTPELHRSFVHAVDLLGGQYKATPKLVLKIMDVKGLTISHVKSHLQMYRGSR 79
>sp|Q941I2|KAN3_ARATH Probable transcription factor KAN3 OS=Arabidopsis thaliana GN=KAN3
PE=2 SV=1
Length = 322
Score = 88.2 bits (217), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 44/80 (55%), Positives = 52/80 (65%), Gaps = 2/80 (2%)
Query: 248 PSASANNAPAKPRMRWTPELHEAFVEAVNQLGGSERATPKGVLKLMKVEGLTIYHVKSHL 307
P +A PRMRWT LH FV AV LGG ERATPK VL+LM V+ LT+ HVKSHL
Sbjct: 154 PRFTAKRGVRAPRMRWTTTLHAHFVHAVQLLGGHERATPKSVLELMDVQDLTLAHVKSHL 213
Query: 308 QKYRTARY--RPDSSEGSSE 325
Q YRT + +P +S G S+
Sbjct: 214 QMYRTIKSTEKPTTSSGQSD 233
>sp|Q93WJ9|KAN1_ARATH Transcription repressor KAN1 OS=Arabidopsis thaliana GN=KAN1 PE=1
SV=1
Length = 403
Score = 87.8 bits (216), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 47/90 (52%), Positives = 57/90 (63%), Gaps = 3/90 (3%)
Query: 242 IRTVVTPSASANNAPAKPRMRWTPELHEAFVEAVNQLGGSERATPKGVLKLMKVEGLTIY 301
IR+ P + PRMRWT LH FV AV LGG ERATPK VL+LM V+ LT+
Sbjct: 203 IRSRFLPKMPTKRSMRAPRMRWTSSLHARFVHAVELLGGHERATPKSVLELMDVKDLTLA 262
Query: 302 HVKSHLQKYRTARY--RP-DSSEGSSEKRL 328
HVKSHLQ YRT + +P SS+GS E+ +
Sbjct: 263 HVKSHLQMYRTVKTTNKPAASSDGSGEEEM 292
>sp|Q9C616|KAN2_ARATH Probable transcription factor KAN2 OS=Arabidopsis thaliana GN=KAN2
PE=2 SV=1
Length = 388
Score = 86.7 bits (213), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 46/93 (49%), Positives = 52/93 (55%), Gaps = 6/93 (6%)
Query: 222 TSMPAHRTQVHQQLPASSTEIRTVVTPSASANNAPAKPRMRWTPELHEAFVEAVNQLGGS 281
S P + HQ L R P A + PRMRWT LH FV AV LGG
Sbjct: 183 VSNPNYHNHHHQTLN------RARFMPRFPAKRSMRAPRMRWTTTLHARFVHAVELLGGH 236
Query: 282 ERATPKGVLKLMKVEGLTIYHVKSHLQKYRTAR 314
ERATPK VL+LM V+ LT+ HVKSHLQ YRT +
Sbjct: 237 ERATPKSVLELMDVKDLTLAHVKSHLQMYRTVK 269
>sp|Q9FJV5|KAN4_ARATH Probable transcription factor KAN4 OS=Arabidopsis thaliana GN=KAN4
PE=1 SV=1
Length = 276
Score = 85.1 bits (209), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 43/70 (61%), Positives = 47/70 (67%), Gaps = 2/70 (2%)
Query: 259 PRMRWTPELHEAFVEAVNQLGGSERATPKGVLKLMKVEGLTIYHVKSHLQKYRTARYRPD 318
PRMRWT LH FV AV LGG ERATPK VL+LM V+ LT+ HVKSHLQ YRT +
Sbjct: 106 PRMRWTSTLHAHFVHAVQLLGGHERATPKSVLELMNVKDLTLAHVKSHLQMYRTVKCTDK 165
Query: 319 SS--EGSSEK 326
S EG EK
Sbjct: 166 GSPGEGKVEK 175
>sp|Q0J235|ROLL9_ORYSJ Probable transcription factor RL9 OS=Oryza sativa subsp. japonica
GN=RL9 PE=2 SV=2
Length = 532
Score = 84.0 bits (206), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 41/69 (59%), Positives = 49/69 (71%), Gaps = 2/69 (2%)
Query: 259 PRMRWTPELHEAFVEAVNQLGGSERATPKGVLKLMKVEGLTIYHVKSHLQKYRTARY--R 316
PRMRWT LH FV AV LGG ERATPK VL+LM V+ LT+ HVKSHLQ YRT + +
Sbjct: 325 PRMRWTSTLHARFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMYRTVKSTDK 384
Query: 317 PDSSEGSSE 325
P +S G ++
Sbjct: 385 PAASSGPAD 393
>sp|Q940D0|ARR1_ARATH Two-component response regulator ARR1 OS=Arabidopsis thaliana
GN=ARR1 PE=1 SV=2
Length = 690
Score = 70.9 bits (172), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 35/59 (59%), Positives = 42/59 (71%), Gaps = 1/59 (1%)
Query: 258 KPRMRWTPELHEAFVEAVNQLGGSERATPKGVLKLMKVEGLTIYHVKSHLQKYRTARYR 316
KPR+ W+ ELH+ FV AVNQLG E+A PK +L+LM V GLT +V SHLQKYR R
Sbjct: 237 KPRVVWSVELHQQFVAAVNQLG-VEKAVPKKILELMNVPGLTRENVASHLQKYRIYLRR 294
>sp|Q9FFH0|GLK2_ARATH Transcription activator GLK2 OS=Arabidopsis thaliana GN=GLK2 PE=2
SV=1
Length = 386
Score = 69.7 bits (169), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 32/62 (51%), Positives = 45/62 (72%), Gaps = 1/62 (1%)
Query: 253 NNAPAKPRMRWTPELHEAFVEAVNQLGGSERATPKGVLKLMKVEGLTIYHVKSHLQKYRT 312
N+ KP++ WTPELH FV+AV QL G ++A P +L++M V+ LT ++V SHLQKYR+
Sbjct: 142 NDIKKKPKVDWTPELHRKFVQAVEQL-GVDKAVPSRILEIMNVKSLTRHNVASHLQKYRS 200
Query: 313 AR 314
R
Sbjct: 201 HR 202
>sp|Q9LZJ8|ARR20_ARATH Putative two-component response regulator ARR20 OS=Arabidopsis
thaliana GN=ARR20 PE=2 SV=1
Length = 426
Score = 69.3 bits (168), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 39/79 (49%), Positives = 48/79 (60%), Gaps = 14/79 (17%)
Query: 258 KPRMRWTPELHEAFVEAVNQLGGSERATPKGVLKLMK----VEGLTIYHVKSHLQKYRTA 313
KPRM+WTPELH F AV ++G E+A PK +LK M+ V+GLT +V SHLQKYR
Sbjct: 211 KPRMQWTPELHHKFEVAVEKMGSLEKAFPKTILKYMQEELNVQGLTRNNVASHLQKYRQ- 269
Query: 314 RYRPDSSEGSSEKRLTPLE 332
SS+K TP E
Sbjct: 270 ---------SSKKTCTPQE 279
>sp|Q9FGT7|ARR18_ARATH Two-component response regulator ARR18 OS=Arabidopsis thaliana
GN=ARR18 PE=2 SV=2
Length = 635
Score = 69.3 bits (168), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 35/73 (47%), Positives = 48/73 (65%), Gaps = 4/73 (5%)
Query: 258 KPRMRWTPELHEAFVEAVNQLGGSERATPKGVLKLMKVEGLTIYHVKSHLQKYRTARYRP 317
KPR+ W+ ELH+ FV AV QLG ++A PK +L LM +EGLT +V SHLQKYR +
Sbjct: 194 KPRVVWSQELHQKFVSAVQQLG-LDKAVPKKILDLMSIEGLTRENVASHLQKYRLYLKKI 252
Query: 318 DSSEGSSEKRLTP 330
D + ++ +TP
Sbjct: 253 DEGQ---QQNMTP 262
>sp|Q9ZWJ9|ARR2_ARATH Two-component response regulator ARR2 OS=Arabidopsis thaliana
GN=ARR2 PE=1 SV=1
Length = 664
Score = 68.9 bits (167), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 33/59 (55%), Positives = 42/59 (71%), Gaps = 1/59 (1%)
Query: 258 KPRMRWTPELHEAFVEAVNQLGGSERATPKGVLKLMKVEGLTIYHVKSHLQKYRTARYR 316
KPR+ W+ ELH+ FV AVNQLG ++A PK +L++M V GLT +V SHLQKYR R
Sbjct: 216 KPRVVWSVELHQQFVAAVNQLG-VDKAVPKKILEMMNVPGLTRENVASHLQKYRIYLRR 273
>sp|O49397|ARR10_ARATH Two-component response regulator ARR10 OS=Arabidopsis thaliana
GN=ARR10 PE=1 SV=1
Length = 552
Score = 67.4 bits (163), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/59 (55%), Positives = 40/59 (67%), Gaps = 1/59 (1%)
Query: 255 APAKPRMRWTPELHEAFVEAVNQLGGSERATPKGVLKLMKVEGLTIYHVKSHLQKYRTA 313
A KPR+ WT ELH F+ AV+ LG ERA PK +L LM V+ LT +V SHLQK+R A
Sbjct: 180 AQKKPRVLWTHELHNKFLAAVDHLG-VERAVPKKILDLMNVDKLTRENVASHLQKFRVA 237
>sp|Q9M9B9|ARR19_ARATH Putative two-component response regulator ARR19 OS=Arabidopsis
thaliana GN=ARR19 PE=2 SV=2
Length = 407
Score = 66.6 bits (161), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 30/59 (50%), Positives = 43/59 (72%), Gaps = 3/59 (5%)
Query: 256 PAKPRMRWTPELHEAFVEAVNQLGGSERATPKGVLKL---MKVEGLTIYHVKSHLQKYR 311
P KPRM WT ELH+ F+EA+ +GG E+A PK +++ M++EG+T +V SHLQK+R
Sbjct: 213 PRKPRMTWTEELHQKFLEAIEIIGGIEKANPKVLVECLQEMRIEGITRSNVASHLQKHR 271
>sp|Q9SIV3|GLK1_ARATH Transcription activator GLK1 OS=Arabidopsis thaliana GN=GLK1 PE=2
SV=2
Length = 420
Score = 66.2 bits (160), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 34/64 (53%), Positives = 43/64 (67%), Gaps = 1/64 (1%)
Query: 251 SANNAPAKPRMRWTPELHEAFVEAVNQLGGSERATPKGVLKLMKVEGLTIYHVKSHLQKY 310
S N K ++ WTPELH FVEAV QL G ++A P +L+LM V LT ++V SHLQKY
Sbjct: 146 SNNEGKRKVKVDWTPELHRRFVEAVEQL-GVDKAVPSRILELMGVHCLTRHNVASHLQKY 204
Query: 311 RTAR 314
R+ R
Sbjct: 205 RSHR 208
>sp|P62598|ARR12_ARATH Two-component response regulator ARR12 OS=Arabidopsis thaliana
GN=ARR12 PE=2 SV=2
Length = 596
Score = 66.2 bits (160), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 35/62 (56%), Positives = 41/62 (66%), Gaps = 1/62 (1%)
Query: 255 APAKPRMRWTPELHEAFVEAVNQLGGSERATPKGVLKLMKVEGLTIYHVKSHLQKYRTAR 314
A K R+ WT ELH+ FV AVNQLG E+A PK +L LM VE LT +V SHLQK+R
Sbjct: 192 AQKKQRVVWTVELHKKFVAAVNQLG-YEKAMPKKILDLMNVEKLTRENVASHLQKFRLYL 250
Query: 315 YR 316
R
Sbjct: 251 KR 252
>sp|Q5NAN5|GLK2_ORYSJ Probable transcription factor GLK2 OS=Oryza sativa subsp. japonica
GN=GLK2 PE=2 SV=1
Length = 539
Score = 65.5 bits (158), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 30/57 (52%), Positives = 42/57 (73%), Gaps = 1/57 (1%)
Query: 258 KPRMRWTPELHEAFVEAVNQLGGSERATPKGVLKLMKVEGLTIYHVKSHLQKYRTAR 314
K ++ WTPELH FV+AV QLG ++A P +L+LM +E LT +++ SHLQKYR+ R
Sbjct: 215 KVKVDWTPELHRRFVQAVEQLG-IDKAVPSRILELMGIECLTRHNIASHLQKYRSHR 270
>sp|Q6LA43|APRR2_ARATH Two-component response regulator-like APRR2 OS=Arabidopsis thaliana
GN=APRR2 PE=2 SV=2
Length = 535
Score = 65.1 bits (157), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/63 (49%), Positives = 45/63 (71%), Gaps = 1/63 (1%)
Query: 252 ANNAPAKPRMRWTPELHEAFVEAVNQLGGSERATPKGVLKLMKVEGLTIYHVKSHLQKYR 311
+ N ++ ++ WTPELH+ FV+AV QLG ++A P +L+LMKV LT ++V SHLQK+R
Sbjct: 290 SGNKTSRKKVDWTPELHKKFVQAVEQLG-VDQAIPSRILELMKVGTLTRHNVASHLQKFR 348
Query: 312 TAR 314
R
Sbjct: 349 QHR 351
>sp|Q5Z5I4|GLK1_ORYSJ Probable transcription factor GLK1 OS=Oryza sativa subsp. japonica
GN=GLK1 PE=2 SV=1
Length = 455
Score = 62.4 bits (150), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 27/52 (51%), Positives = 39/52 (75%), Gaps = 1/52 (1%)
Query: 263 WTPELHEAFVEAVNQLGGSERATPKGVLKLMKVEGLTIYHVKSHLQKYRTAR 314
WTPELH FV+AV QL G ++A P +L++M ++ LT +++ SHLQKYR+ R
Sbjct: 185 WTPELHRRFVQAVEQL-GIDKAVPSRILEIMGIDSLTRHNIASHLQKYRSHR 235
>sp|Q7Y0W5|EHD1_ORYSJ Two-component response regulator EHD1 OS=Oryza sativa subsp.
japonica GN=EHD1 PE=1 SV=1
Length = 341
Score = 62.0 bits (149), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 29/55 (52%), Positives = 37/55 (67%), Gaps = 1/55 (1%)
Query: 257 AKPRMRWTPELHEAFVEAVNQLGGSERATPKGVLKLMKVEGLTIYHVKSHLQKYR 311
K R+ WT +LH F+ AVN LG ++A PK +L +MKV+ LT V SHLQKYR
Sbjct: 197 GKSRLTWTTQLHRQFIAAVNHLG-EDKAVPKKILGIMKVKHLTREQVASHLQKYR 250
>sp|Q7Y0W3|EHD1_ORYSI Two-component response regulator EHD1 OS=Oryza sativa subsp. indica
PE=2 SV=1
Length = 341
Score = 62.0 bits (149), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 29/55 (52%), Positives = 37/55 (67%), Gaps = 1/55 (1%)
Query: 257 AKPRMRWTPELHEAFVEAVNQLGGSERATPKGVLKLMKVEGLTIYHVKSHLQKYR 311
K R+ WT +LH F+ AVN LG ++A PK +L +MKV+ LT V SHLQKYR
Sbjct: 197 GKSRLTWTTQLHRQFIAAVNHLG-EDKAVPKKILGIMKVKHLTREQVASHLQKYR 250
>sp|Q9FXD6|ARR11_ARATH Two-component response regulator ARR11 OS=Arabidopsis thaliana
GN=ARR11 PE=1 SV=1
Length = 521
Score = 62.0 bits (149), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/52 (55%), Positives = 35/52 (67%)
Query: 260 RMRWTPELHEAFVEAVNQLGGSERATPKGVLKLMKVEGLTIYHVKSHLQKYR 311
R+ W+ ELH FV AVNQ+G +A PK +L LM V LT +V SHLQKYR
Sbjct: 195 RVVWSFELHHKFVNAVNQIGCDHKAGPKKILDLMNVPWLTRENVASHLQKYR 246
>sp|Q8L9Y3|ARR14_ARATH Two-component response regulator ARR14 OS=Arabidopsis thaliana
GN=ARR14 PE=1 SV=2
Length = 382
Score = 61.6 bits (148), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/54 (53%), Positives = 40/54 (74%), Gaps = 1/54 (1%)
Query: 258 KPRMRWTPELHEAFVEAVNQLGGSERATPKGVLKLMKVEGLTIYHVKSHLQKYR 311
K R+ W+ ELH+ FV AVN+LG ++A PK +L+LM V GL+ +V SHLQK+R
Sbjct: 200 KSRVVWSIELHQQFVNAVNKLG-IDKAVPKRILELMNVPGLSRENVASHLQKFR 252
>sp|Q9LYP5|ARR21_ARATH Putative two-component response regulator ARR21 OS=Arabidopsis
thaliana GN=ARR21 PE=2 SV=3
Length = 613
Score = 54.7 bits (130), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 37/59 (62%), Gaps = 1/59 (1%)
Query: 258 KPRMRWTPELHEAFVEAVNQLGGSERATPKGVLKLMKVEGLTIYHVKSHLQKYRTARYR 316
K +++WT LH+ F++A+ +G ++A PK +L M V LT +V SHLQKYR R
Sbjct: 222 KKKIQWTDSLHDLFLQAIRHIG-LDKAVPKKILAFMSVPYLTRENVASHLQKYRIFLRR 279
>sp|Q9ZVD3|ARR13_ARATH Putative two-component response regulator ARR13 OS=Arabidopsis
thaliana GN=ARR13 PE=2 SV=2
Length = 572
Score = 51.2 bits (121), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 35/56 (62%), Gaps = 1/56 (1%)
Query: 256 PAKPRMRWTPELHEAFVEAVNQLGGSERATPKGVLKLMKVEGLTIYHVKSHLQKYR 311
P K ++ WT L + F++A+ +G ++ PK +L +M V LT +V SHLQKYR
Sbjct: 223 PKKKKIWWTNPLQDLFLQAIQHIG-YDKVVPKKILAIMNVPYLTRENVASHLQKYR 277
>sp|Q9FJ16|APRR4_ARATH Putative two-component response regulator-like APRR4 OS=Arabidopsis
thaliana GN=APRR4 PE=3 SV=1
Length = 292
Score = 50.4 bits (119), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/59 (47%), Positives = 40/59 (67%), Gaps = 2/59 (3%)
Query: 250 ASANNAPAKPRMRWTPELHEAFVEAVNQLGGSERATPKGVLKLMKVEGLTIYHVKSHLQ 308
A A++A K R+ W ELH+ F+ AV+ LG ERA PK +L +MKV+ ++ +V SHLQ
Sbjct: 216 ACASSAK-KRRVVWDEELHQNFLNAVDFLG-LERAVPKKILDVMKVDYISRENVASHLQ 272
>sp|Q9C9F6|APRR6_ARATH Putative two-component response regulator-like APRR6 OS=Arabidopsis
thaliana GN=APRR6 PE=3 SV=2
Length = 755
Score = 41.6 bits (96), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
Query: 263 WTPELHEAFVEAVNQLGGSERATPKGVLKLMKVEGLTIYHVKSHLQKYR 311
W E H F+ A++ LG E PK +L++M LT V SHLQKY+
Sbjct: 227 WNSERHMKFIAAISILG-EEDFRPKSILEIMNDPNLTHRQVGSHLQKYK 274
>sp|A7M9B2|YCF1_CUSRE Putative membrane protein ycf1 OS=Cuscuta reflexa GN=ycf1 PE=3 SV=1
Length = 1750
Score = 34.3 bits (77), Expect = 2.0, Method: Composition-based stats.
Identities = 24/84 (28%), Positives = 42/84 (50%), Gaps = 7/84 (8%)
Query: 394 LKGSSSNQENSSTSLAKSELEGTQVDHDKKGSDTANANSTNEESSQPKELDGKQKAPETE 453
L + S Q++ + S KSE + K+ S+T + + +S Q E D KQK+ ET+
Sbjct: 1417 LSETDSKQKSETDSKQKSETD------SKQKSETDSKQKSETDSKQKSETDSKQKS-ETD 1469
Query: 454 APENAELNVSELSSQPSKRPRTEE 477
+ + +E + + S SK+ E
Sbjct: 1470 SKQKSETDSKQKSETDSKQKNNAE 1493
Score = 32.3 bits (72), Expect = 9.4, Method: Composition-based stats.
Identities = 25/78 (32%), Positives = 39/78 (50%), Gaps = 9/78 (11%)
Query: 386 KQKSGIDMLKGSSSNQENSSTSLAKSELEGTQVDH--DKKGSDTANANSTNEESSQPKEL 443
KQKS D S Q++ + S KSE + Q K+ S+T + + +S Q E
Sbjct: 1423 KQKSETD------SKQKSETDSKQKSETDSKQKSETDSKQKSETDSKQKSETDSKQKSET 1476
Query: 444 DGKQKA-PETEAPENAEL 460
D KQK+ +++ NAE+
Sbjct: 1477 DSKQKSETDSKQKNNAEI 1494
>sp|A1R6X5|SYL_ARTAT Leucine--tRNA ligase OS=Arthrobacter aurescens (strain TC1) GN=leuS
PE=3 SV=2
Length = 842
Score = 33.1 bits (74), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 40/81 (49%), Gaps = 18/81 (22%)
Query: 129 YTKESSSSWCPESLPGYVDFAANTPVQNSQMEGSSC--SGAIVSEEFSKRNDWH----EW 182
Y K+S +WCP+ L T + N Q+ +C G V+++ N W+ ++
Sbjct: 170 YRKDSPVNWCPKDL---------TVLANEQVVNGACERCGTPVTKK--SLNQWYFKITDY 218
Query: 183 ADQLITDDDPLGSSWNE-ILA 202
AD+L+ D D L W E +LA
Sbjct: 219 ADRLLEDMDQLQGHWPERVLA 239
>sp|Q9QY61|IRX4_MOUSE Iroquois-class homeodomain protein IRX-4 OS=Mus musculus GN=Irx4
PE=2 SV=1
Length = 515
Score = 32.0 bits (71), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 39/78 (50%), Gaps = 7/78 (8%)
Query: 71 GVVGHIFSSSSGLSSDLQYSS-ASPHEKLPRTTSFISQSSTPIPQTSHSGLPQSSTSSHY 129
GV G + SS G + + Y S AS L SF S+ T +SH+GLP ++ +++Y
Sbjct: 71 GVYGSPYGSSQGYGNYVTYGSEASAFYSL---NSFESKDGT---GSSHAGLPPTAAAAYY 124
Query: 130 TKESSSSWCPESLPGYVD 147
E + S P G VD
Sbjct: 125 PYEPALSQYPYDRYGTVD 142
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.305 0.121 0.333
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 171,955,634
Number of Sequences: 539616
Number of extensions: 7277039
Number of successful extensions: 22440
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 63
Number of HSP's successfully gapped in prelim test: 368
Number of HSP's that attempted gapping in prelim test: 21052
Number of HSP's gapped (non-prelim): 1318
length of query: 477
length of database: 191,569,459
effective HSP length: 121
effective length of query: 356
effective length of database: 126,275,923
effective search space: 44954228588
effective search space used: 44954228588
T: 11
A: 40
X1: 16 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 43 (22.0 bits)
S2: 63 (28.9 bits)