Your job contains 1 sequence.
>011786
MGSPVEATNSTSPPCSPASQSNGSMAKMTPTPVRTAQNTASNWLKTVIAPLPSKPSAELE
KFLSLGSVSIANEVESGANIVLEAIFPSIKLGERLFNWSLLNVNLMDSLWSGQERTEALK
LYYKVLESICASEAGKSSSRDLSGLLTNEKFHRCMLACSAELVSMARTRVSILFPLILER
AGITAFDMCKVTESFIRHEDSLPRELMRHLNSLEETMLESMVWEKGSSLYNSLIASRPDL
QEEIKRLKLLAEPMPSLHEISMNNHLASGVLAYQHNLHKHKPSTGNNGMKRLCDENGSKL
TKHNSYATAMKVDSPVVDSHQVKLQPVTPSSQTAFMSPVQSKTPKDGGIKMDAAVTFLFN
KMTKLGAVRINSMAERLKLSQQIREKTYLLFRQILVEKTYLFFNRHIDLIILCCFCGVAK
INKLKLKFEEITDNYVKEPQCRSQDFGFVFAGWLSKHKGKNRENYKSIDAFYNKYSF
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 011786
(477 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
UNIPROTKB|Q66WV0 - symbol:RBR1 "Retinoblastoma-related pr... 1108 2.9e-112 1
TAIR|locus:2082194 - symbol:RBR1 "retinoblastoma-related ... 1080 2.6e-109 1
UNIPROTKB|H9L1Q3 - symbol:RBL2 "Uncharacterized protein" ... 270 1.1e-29 2
UNIPROTKB|H9KZ75 - symbol:RBL2 "Uncharacterized protein" ... 270 1.2e-29 2
UNIPROTKB|Q08999 - symbol:RBL2 "Retinoblastoma-like prote... 238 2.0e-29 2
MGI|MGI:105085 - symbol:Rbl2 "retinoblastoma-like 2" spec... 240 8.1e-29 2
UNIPROTKB|A5D7M0 - symbol:RBL2 "Uncharacterized protein" ... 238 1.2e-27 2
RGD|3541 - symbol:Rbl2 "retinoblastoma-like 2" species:10... 234 2.7e-27 2
UNIPROTKB|O55081 - symbol:Rbl2 "Retinoblastoma-like prote... 234 2.7e-27 2
UNIPROTKB|E2RIG3 - symbol:RBL2 "Uncharacterized protein" ... 232 5.8e-27 2
RGD|1595511 - symbol:Rbl1 "retinoblastoma-like 1 (p107)" ... 239 1.8e-26 2
UNIPROTKB|E2RQ78 - symbol:RBL1 "Uncharacterized protein" ... 229 2.8e-26 2
UNIPROTKB|F1PBK3 - symbol:RBL1 "Uncharacterized protein" ... 229 2.8e-26 2
UNIPROTKB|E1BQ59 - symbol:RBL1 "Uncharacterized protein" ... 240 3.5e-26 2
MGI|MGI:103300 - symbol:Rbl1 "retinoblastoma-like 1 (p107... 229 1.9e-25 2
UNIPROTKB|P28749 - symbol:RBL1 "Retinoblastoma-like prote... 227 2.0e-25 2
UNIPROTKB|E1BMR3 - symbol:RBL1 "Uncharacterized protein" ... 223 2.1e-25 2
UNIPROTKB|F1SEM0 - symbol:RBL1 "Uncharacterized protein" ... 223 2.7e-25 2
UNIPROTKB|F1MD46 - symbol:RB1 "Uncharacterized protein" s... 231 3.2e-25 2
UNIPROTKB|Q9BDQ3 - symbol:RB1 "Retinoblastoma protein 1" ... 221 1.8e-24 2
UNIPROTKB|P06400 - symbol:RB1 "Retinoblastoma-associated ... 221 2.1e-24 2
ZFIN|ZDB-GENE-030131-8179 - symbol:rbl1 "retinoblastoma-l... 227 4.4e-24 2
UNIPROTKB|J9NU49 - symbol:RB1 "Uncharacterized protein" s... 227 9.8e-24 2
RGD|3540 - symbol:Rb1 "retinoblastoma 1" species:10116 "R... 227 3.3e-23 2
UNIPROTKB|E1BZL8 - symbol:RB1 "Retinoblastoma-associated ... 219 4.6e-23 2
UNIPROTKB|E1C0H8 - symbol:RB1 "Retinoblastoma-associated ... 219 4.7e-23 2
UNIPROTKB|Q90600 - symbol:RB1 "Retinoblastoma-associated ... 219 4.9e-23 2
UNIPROTKB|F1RK14 - symbol:RB1 "Uncharacterized protein" s... 219 5.2e-23 2
UNIPROTKB|F1NV90 - symbol:RB1 "Retinoblastoma-associated ... 218 5.6e-23 2
UNIPROTKB|F1NAY1 - symbol:RB1 "Retinoblastoma-associated ... 219 5.6e-23 2
UNIPROTKB|F1NAY3 - symbol:RB1 "Retinoblastoma-associated ... 218 6.3e-23 2
MGI|MGI:97874 - symbol:Rb1 "retinoblastoma 1" species:100... 221 2.0e-22 2
UNIPROTKB|F1PQ32 - symbol:RB1 "Uncharacterized protein" s... 212 4.9e-22 2
UNIPROTKB|F1NEZ1 - symbol:F1NEZ1 "Uncharacterized protein... 270 4.5e-20 1
UNIPROTKB|B7Z913 - symbol:RBL2 "cDNA FLJ53278, highly sim... 238 1.2e-16 2
UNIPROTKB|F5H837 - symbol:RBL2 "Retinoblastoma-like prote... 238 3.0e-16 2
FB|FBgn0015799 - symbol:Rbf "Retinoblastoma-family protei... 168 9.5e-15 2
DICTYBASE|DDB_G0290551 - symbol:rblA "retinoblastoma-like... 160 1.7e-13 2
FB|FBgn0038390 - symbol:Rbf2 "Retinoblastoma-family prote... 171 2.7e-13 2
WB|WBGene00003020 - symbol:lin-35 species:6239 "Caenorhab... 125 4.5e-12 2
UNIPROTKB|G5EDT1 - symbol:lin-35 "Synthetic multivulva pr... 125 4.5e-12 2
ZFIN|ZDB-GENE-040428-1 - symbol:rb1 "retinoblastoma 1" sp... 142 6.3e-12 2
UNIPROTKB|I3LUP8 - symbol:RBL2 "Uncharacterized protein" ... 161 9.5e-09 1
UNIPROTKB|H9KZ60 - symbol:RBL2 "Uncharacterized protein" ... 149 2.2e-07 1
>UNIPROTKB|Q66WV0 [details] [associations]
symbol:RBR1 "Retinoblastoma-related protein 1" species:4100
"Nicotiana benthamiana" [GO:0032875 "regulation of DNA
endoreduplication" evidence=IMP] [GO:0051782 "negative regulation
of cell division" evidence=IMP] InterPro:IPR002719
InterPro:IPR002720 Pfam:PF01857 Pfam:PF01858 GO:GO:0005634
GO:GO:0006355 GO:GO:0006351 GO:GO:0007049 Gene3D:1.10.472.10
InterPro:IPR013763 SMART:SM00385 SUPFAM:SSF47954 GO:GO:0051782
GO:GO:0032875 InterPro:IPR024599 Pfam:PF11934 HSSP:P06400
EMBL:AY699399 ProteinModelPortal:Q66WV0 Uniprot:Q66WV0
Length = 1003
Score = 1108 (395.1 bits), Expect = 2.9e-112, P = 2.9e-112
Identities = 244/482 (50%), Positives = 317/482 (65%)
Query: 1 MGSPVEATNSTSPPCSPASQSNGSMAKMTP-TPVRTAQNTASNWLKTVIAPLPSKPSAEL 59
M SP + ST SP N + +KMT TPV TA TA WL+TVIAPL KPSAEL
Sbjct: 377 MASPAKTVTST---LSPYRSPNCANSKMTAATPVSTAMTTA-RWLRTVIAPLQPKPSAEL 432
Query: 60 EKFLSLGSVSIANEVESGANIVLEAIFPSIKLGERLF-NWSLLNVNLMDSLWSGQERTEA 118
E+FLS + +V A I+LEAIFPS E SL + +LMD++W+ Q R+EA
Sbjct: 433 ERFLSSCDRDVTADVIRRAQIILEAIFPSSGPAEHCAAGGSLQSTSLMDNIWAEQRRSEA 492
Query: 119 LKLYYKVLESICASEAGKSSSRDLSGLLTNEKFHRCMLACSAELVSMARTRVSILFPLIL 178
LKLYY+VL+++C +E+ + +L+ LLTNE+FHRCMLACSAELV V++LFP +L
Sbjct: 493 LKLYYRVLQTMCTAESQILNGNNLTSLLTNERFHRCMLACSAELVLATHKTVTMLFPAVL 552
Query: 179 ERAGITAFDMCKVTESFIRHEDSLPRELMRHLNSLEETMLESMVWEKGSSLYNSLIASRP 238
ER GITAFD+ KV ESFIRHE+SLPREL RHLNSLEE +LESMVWEKGSS+YNSL ++P
Sbjct: 553 ERTGITAFDLSKVIESFIRHEESLPRELRRHLNSLEERLLESMVWEKGSSMYNSLAVAKP 612
Query: 239 DLQEEIKRLKLLAEPMPSLHEISMNNHLASGVLAYQHNLHKHKPS-TGNNG----MKRLC 293
L EI R+ LLAEPMPSL I+M+ +L+SG L +LHK+ + G G K++C
Sbjct: 613 SLAAEINRMGLLAEPMPSLDAIAMHINLSSGSLPPLPSLHKNNLAPNGQIGDIRSPKKVC 672
Query: 294 DENGSKLTKHNSYATAMKVDSPVVDSHQVKLQPVTPSSQTAFMSPVQSKTPKDGGIKMDA 353
E S L + NS+ + +K +++ + K P P+ +AF SP + G +
Sbjct: 673 SEYRSVLVERNSFTSPVKDRFLALNNIKSKFPP--PALHSAFASPTRPNPGGGGETCAET 730
Query: 354 AVTFLFNKMTKLGAVRINSMAERLKLSQQIREKTYLLFRQILVEKTYLFFNRHIDLIILC 413
A+ F K+ KL AVRIN M ERL+LSQQIRE Y LF++IL ++T LFFNRHID IILC
Sbjct: 731 AINVFFGKIVKLAAVRINGMIERLQLSQQIRETVYCLFQKILSQRTSLFFNRHIDQIILC 790
Query: 414 CFCGVAKINKLKLKFEEITDNYVKEPQCRSQDFGFVFAGW-LSKHKGKNRENYKSIDAFY 472
F GVAKI++L L F+EI NY K+PQC+ Q F VF W L++H + ++ I FY
Sbjct: 791 SFYGVAKISQLNLTFKEIICNYRKQPQCKPQVFRSVFVDWTLARHNVRTGADHVDIITFY 850
Query: 473 NK 474
N+
Sbjct: 851 NE 852
>TAIR|locus:2082194 [details] [associations]
symbol:RBR1 "retinoblastoma-related 1" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM;IEA]
[GO:0051726 "regulation of cell cycle" evidence=IMP] [GO:0051783
"regulation of nuclear division" evidence=IMP] [GO:0005515 "protein
binding" evidence=IPI] [GO:0010090 "trichome morphogenesis"
evidence=RCA;IMP] [GO:0032875 "regulation of DNA endoreduplication"
evidence=IMP] [GO:0048366 "leaf development" evidence=IMP]
[GO:0001558 "regulation of cell growth" evidence=IMP] [GO:2000036
"regulation of stem cell maintenance" evidence=IMP] [GO:0009553
"embryo sac development" evidence=IMP] [GO:0009567 "double
fertilization forming a zygote and endosperm" evidence=IEP]
[GO:0000082 "G1/S transition of mitotic cell cycle"
evidence=IMP;TAS] [GO:0005829 "cytosol" evidence=IDA] [GO:0006349
"regulation of gene expression by genetic imprinting" evidence=IPI]
[GO:0009555 "pollen development" evidence=IMP] [GO:0022619
"generative cell differentiation" evidence=IMP] [GO:0001708 "cell
fate specification" evidence=IMP] [GO:0003677 "DNA binding"
evidence=IDA] [GO:0006261 "DNA-dependent DNA replication"
evidence=RCA] [GO:0042023 "DNA endoreduplication" evidence=RCA]
[GO:0051302 "regulation of cell division" evidence=RCA] [GO:0008356
"asymmetric cell division" evidence=IGI] [GO:0008134 "transcription
factor binding" evidence=TAS] InterPro:IPR002719 InterPro:IPR002720
Pfam:PF01857 Pfam:PF01858 GO:GO:0005829 GO:GO:0005634 GO:GO:0001708
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0019048 GO:GO:0010090
GO:GO:0006355 GO:GO:0001558 GO:GO:0003677 GO:GO:0000082
GO:GO:0006351 GO:GO:0048366 GO:GO:0009553 GO:GO:0008134
EMBL:AP002047 EMBL:AC069472 GO:GO:0006349 GO:GO:0008356
Gene3D:1.10.472.10 InterPro:IPR013763 SMART:SM00385 SUPFAM:SSF47954
GO:GO:0051783 GO:GO:0032875 GO:GO:0009567 GO:GO:2000036
eggNOG:NOG296920 KO:K04681 InterPro:IPR024599 Pfam:PF11934
EMBL:AF245395 EMBL:AY056293 EMBL:AY150438 IPI:IPI00541504
RefSeq:NP_566417.3 UniGene:At.14958 HSSP:P06400
ProteinModelPortal:Q9LKZ3 SMR:Q9LKZ3 DIP:DIP-33046N IntAct:Q9LKZ3
STRING:Q9LKZ3 PaxDb:Q9LKZ3 PRIDE:Q9LKZ3 EnsemblPlants:AT3G12280.1
GeneID:820408 KEGG:ath:AT3G12280 GeneFarm:3420 TAIR:At3g12280
HOGENOM:HOG000078660 InParanoid:Q9LHH8 OMA:FGERICT PhylomeDB:Q9LKZ3
ProtClustDB:CLSN2690882 Genevestigator:Q9LKZ3 GO:GO:0022619
Uniprot:Q9LKZ3
Length = 1013
Score = 1080 (385.2 bits), Expect = 2.6e-109, P = 2.6e-109
Identities = 236/482 (48%), Positives = 307/482 (63%)
Query: 1 MGSPVEATNST-SPPCSPASQSNG--SMAKMTPTPVRTAQNTASNWLKTVIAPLPSKPSA 57
+ SP S SP SPA+++NG K+ TPV TA TA WL+TVI+PL KPS
Sbjct: 373 LSSPARTFISPLSPHKSPAAKTNGISGATKLAATPVSTAMTTAK-WLRTVISPLLPKPSP 431
Query: 58 ELEKFLSLGSVSIANEVESGANIVLEAIFPSIKLGERLFNWSLLNVNLMDSLWSGQERTE 117
LE FL I N+V A+I+LEAIFP+ LG + SL V+LMD +W+ Q R E
Sbjct: 432 GLEHFLKSCDRDITNDVTRRAHIILEAIFPNSSLGAQCGGGSLQAVDLMDDIWAEQRRLE 491
Query: 118 ALKLYYKVLESICASEAGKSSSRDLSGLLTNEKFHRCMLACSAELVSMARTRVSILFPLI 177
A KLYY+VLE++C +EA + +L+ LLTNE+FHRCMLACSAELV +++LFP +
Sbjct: 492 ACKLYYRVLEAMCKAEAQILHANNLNSLLTNERFHRCMLACSAELVLATHKTITMLFPAV 551
Query: 178 LERAGITAFDMCKVTESFIRHEDSLPRELMRHLNSLEETMLESMVWEKGSSLYNSLIASR 237
LER GITAFD+ KV ESFIRHEDSLPREL RHLNSLEE +LESMVWEKGSS+YNSLI +R
Sbjct: 552 LERTGITAFDLSKVIESFIRHEDSLPRELRRHLNSLEERLLESMVWEKGSSMYNSLIVAR 611
Query: 238 PDLQEEIKRLKLLAEPMPSLHEISMNNHLASGVLAYQHNLHKHKPSTGNNG----MKRLC 293
P L EI +L LLAEPMPSL I+ + + G + ++ KH+ G NG KRLC
Sbjct: 612 PSLALEINQLGLLAEPMPSLDAIAALINFSDGA-NHASSVQKHETCPGQNGGIRSPKRLC 670
Query: 294 DENGSKLTKHNSYATAMKVDSPVVDSHQVKLQPVTPSSQTAFMSPVQSKTPKDGGIKMDA 353
+ S L + NS+ + +K ++ VK + + P Q+AF SP + G +
Sbjct: 671 TDYRSILVERNSFTSPVK--DRLLALGNVKSKMLPPPLQSAFASPTRPNPGGGGETCAET 728
Query: 354 AVTFLFNKMTKLGAVRINSMAERLKLSQQIREKTYLLFRQILVEKTYLFFNRHIDLIILC 413
+ F K+ KL AVRIN M ERL+LSQQIRE Y F+ +L ++T L F+RHID IILC
Sbjct: 729 GINIFFTKINKLAAVRINGMVERLQLSQQIRESVYCFFQHVLAQRTSLLFSRHIDQIILC 788
Query: 414 CFCGVAKINKLKLKFEEITDNYVKEPQCRSQDFGFVFAGWLS-KHKGKNRENYKSIDAFY 472
CF GVAKI+++ L F EI NY K+PQC+ F V+ L + +G+ ++ I FY
Sbjct: 789 CFYGVAKISQMSLTFREIIYNYRKQPQCKPLVFRSVYVDALQCRRQGRIGPDHVDIITFY 848
Query: 473 NK 474
N+
Sbjct: 849 NE 850
>UNIPROTKB|H9L1Q3 [details] [associations]
symbol:RBL2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005634 "nucleus" evidence=IEA] [GO:0051726 "regulation
of cell cycle" evidence=IEA] InterPro:IPR002719 InterPro:IPR002720
Pfam:PF01857 Pfam:PF01858 GO:GO:0005634 GO:GO:0051726
Gene3D:1.10.472.10 InterPro:IPR013763 SMART:SM00385 SUPFAM:SSF47954
GeneTree:ENSGT00530000063235 InterPro:IPR024599 Pfam:PF11934
EMBL:AADN02043607 Ensembl:ENSGALT00000035613 Uniprot:H9L1Q3
Length = 939
Score = 270 (100.1 bits), Expect = 1.1e-29, Sum P(2) = 1.1e-29
Identities = 100/329 (30%), Positives = 157/329 (47%)
Query: 31 TPVRTAQNTASNWLKTVIAPLPSKPSAELEKFLSLGSVSIANEVESGANIVLEAIFPSIK 90
TPV A + S L T++A L + PS LE+ S + + S + E S++
Sbjct: 273 TPVSIATYSLSR-LHTMLAGLKNAPSENLEQIFRACSRDPSQSIASRVKEMYEVYCQSMQ 331
Query: 91 LGERLFNWSLLNVNLMDSLWSGQERTEALKLYYKVLESICASEAGKSSSRDLSGLLTNEK 150
E N S D R E L YYKVLES+ E + DLS +L +
Sbjct: 332 AEEEFSNLS------KDVASKHFRRAEVL--YYKVLESVIEQERRRLGDTDLSAVLEQDV 383
Query: 151 FHRCMLACSAELVSMARTRVSILFPLILERAGITAFDMCKVTESFIRHEDSLPRELMRHL 210
FHR +LAC E+V+ ++ FP I E I + KV E FIR ED L RE+++HL
Sbjct: 384 FHRSLLACCLEIVTFTY-KLPGSFPFITEIFDIPVYHFYKVIEVFIRAEDGLCREVVKHL 442
Query: 211 NSLEETMLESMVWEKGSSLYNSL------IAS-----RPDLQEEIKRLKLLAEPM-PS-L 257
N +EE +LESM W++ S L++ + + S P E ++ P+ P L
Sbjct: 443 NHIEEQILESMAWKQESILWDRIRDNDNKVPSCEEVMPPQYFERSAANSVVGSPLTPRRL 502
Query: 258 HEI-SMNNHLASGVLAYQHNLH-KHKPSTGNNGMKRLCDENGSKLTKHNSYATAMKVDS- 314
+E+ + + L G+ + L+ ++ T + +RL +N + T N T ++V
Sbjct: 503 NEVRAESGGLGKGISSSPTTLYDRYSSPTAHPTRRRLFVDNDN--TSDNG--TPVRVSQQ 558
Query: 315 PVVDSHQVKLQPVTPSSQTAFMSPVQSKT 343
PVV++ V +Q V P + + ++PV +T
Sbjct: 559 PVVNT--VPVQNVNPEAVS--VTPVPGQT 583
Score = 136 (52.9 bits), Expect = 1.1e-29, Sum P(2) = 1.1e-29
Identities = 41/168 (24%), Positives = 81/168 (48%)
Query: 300 LTKHNSYATAMKVDSPVVDSHQVKLQPVTPSSQTAFMSPVQSKTPKDGGIKMDAAVTFLF 359
L+ S AT +++ V H +P P+ Q + +S+ KM +++ F
Sbjct: 646 LSTQMSGAT-LQLPGQVTVQHITSGEP-RPAQQLTATTATRSR-------KM-GSLSLFF 695
Query: 360 NKMTKLGAVRINSMAERLKLSQQIREKTYLLFRQILVEKTYLFFNRHIDLIILCCFCGVA 419
K+ L +VR+ ++ +L +S ++R+K + F L+ + +RH+D +++C +A
Sbjct: 696 RKVYHLASVRLRDLSVKLDISDELRKKVWTCFEYSLMHCPEIMMDRHLDQLLMCAIYVMA 755
Query: 420 KINKLKLKFEEITDNYVKEPQCRSQDFGFVFAGWLSKHKGKNRENYKS 467
K+ K F+ I Y +PQ +S V+ L K + + R++ S
Sbjct: 756 KVTKEDRSFQNIMRCYRTQPQAKSH----VYRSVLIKGRRRRRQSGSS 799
Score = 47 (21.6 bits), Expect = 1.8e-05, Sum P(2) = 1.8e-05
Identities = 17/56 (30%), Positives = 23/56 (41%)
Query: 2 GSPVEATNSTSPPCSPASQSNGSMAKMTPTP------VRTAQNTASNWLKTVIAPL 51
G+PV + P N +TP P V TA TA+N +TV P+
Sbjct: 550 GTPVRVSQQPVVNTVPVQNVNPEAVSVTPVPGQTLVTVATATVTANNG-QTVTIPV 604
>UNIPROTKB|H9KZ75 [details] [associations]
symbol:RBL2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005634 "nucleus" evidence=IEA] [GO:0051726 "regulation
of cell cycle" evidence=IEA] InterPro:IPR002719 InterPro:IPR002720
Pfam:PF01857 Pfam:PF01858 GO:GO:0005634 GO:GO:0051726
Gene3D:1.10.472.10 InterPro:IPR013763 SMART:SM00385 SUPFAM:SSF47954
GeneTree:ENSGT00530000063235 OMA:CCIDLIY InterPro:IPR024599
Pfam:PF11934 EMBL:AADN02043607 Ensembl:ENSGALT00000005807
Uniprot:H9KZ75
Length = 981
Score = 270 (100.1 bits), Expect = 1.2e-29, Sum P(2) = 1.2e-29
Identities = 100/329 (30%), Positives = 157/329 (47%)
Query: 31 TPVRTAQNTASNWLKTVIAPLPSKPSAELEKFLSLGSVSIANEVESGANIVLEAIFPSIK 90
TPV A + S L T++A L + PS LE+ S + + S + E S++
Sbjct: 316 TPVSIATYSLSR-LHTMLAGLKNAPSENLEQIFRACSRDPSQSIASRVKEMYEVYCQSMQ 374
Query: 91 LGERLFNWSLLNVNLMDSLWSGQERTEALKLYYKVLESICASEAGKSSSRDLSGLLTNEK 150
E N S D R E L YYKVLES+ E + DLS +L +
Sbjct: 375 AEEEFSNLS------KDVASKHFRRAEVL--YYKVLESVIEQERRRLGDTDLSAVLEQDV 426
Query: 151 FHRCMLACSAELVSMARTRVSILFPLILERAGITAFDMCKVTESFIRHEDSLPRELMRHL 210
FHR +LAC E+V+ ++ FP I E I + KV E FIR ED L RE+++HL
Sbjct: 427 FHRSLLACCLEIVTFTY-KLPGSFPFITEIFDIPVYHFYKVIEVFIRAEDGLCREVVKHL 485
Query: 211 NSLEETMLESMVWEKGSSLYNSL------IAS-----RPDLQEEIKRLKLLAEPM-PS-L 257
N +EE +LESM W++ S L++ + + S P E ++ P+ P L
Sbjct: 486 NHIEEQILESMAWKQESILWDRIRDNDNKVPSCEEVMPPQYFERSAANSVVGSPLTPRRL 545
Query: 258 HEI-SMNNHLASGVLAYQHNLH-KHKPSTGNNGMKRLCDENGSKLTKHNSYATAMKVDS- 314
+E+ + + L G+ + L+ ++ T + +RL +N + T N T ++V
Sbjct: 546 NEVRAESGGLGKGISSSPTTLYDRYSSPTAHPTRRRLFVDNDN--TSDNG--TPVRVSQQ 601
Query: 315 PVVDSHQVKLQPVTPSSQTAFMSPVQSKT 343
PVV++ V +Q V P + + ++PV +T
Sbjct: 602 PVVNT--VPVQNVNPEAVS--VTPVPGQT 626
Score = 136 (52.9 bits), Expect = 1.2e-29, Sum P(2) = 1.2e-29
Identities = 41/168 (24%), Positives = 81/168 (48%)
Query: 300 LTKHNSYATAMKVDSPVVDSHQVKLQPVTPSSQTAFMSPVQSKTPKDGGIKMDAAVTFLF 359
L+ S AT +++ V H +P P+ Q + +S+ KM +++ F
Sbjct: 689 LSTQMSGAT-LQLPGQVTVQHITSGEP-RPAQQLTATTATRSR-------KM-GSLSLFF 738
Query: 360 NKMTKLGAVRINSMAERLKLSQQIREKTYLLFRQILVEKTYLFFNRHIDLIILCCFCGVA 419
K+ L +VR+ ++ +L +S ++R+K + F L+ + +RH+D +++C +A
Sbjct: 739 RKVYHLASVRLRDLSVKLDISDELRKKVWTCFEYSLMHCPEIMMDRHLDQLLMCAIYVMA 798
Query: 420 KINKLKLKFEEITDNYVKEPQCRSQDFGFVFAGWLSKHKGKNRENYKS 467
K+ K F+ I Y +PQ +S V+ L K + + R++ S
Sbjct: 799 KVTKEDRSFQNIMRCYRTQPQAKSH----VYRSVLIKGRRRRRQSGSS 842
Score = 47 (21.6 bits), Expect = 2.0e-05, Sum P(2) = 2.0e-05
Identities = 17/56 (30%), Positives = 23/56 (41%)
Query: 2 GSPVEATNSTSPPCSPASQSNGSMAKMTPTP------VRTAQNTASNWLKTVIAPL 51
G+PV + P N +TP P V TA TA+N +TV P+
Sbjct: 593 GTPVRVSQQPVVNTVPVQNVNPEAVSVTPVPGQTLVTVATATVTANNG-QTVTIPV 647
>UNIPROTKB|Q08999 [details] [associations]
symbol:RBL2 "Retinoblastoma-like protein 2" species:9606
"Homo sapiens" [GO:0051726 "regulation of cell cycle" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0016568 "chromatin
modification" evidence=IEA] [GO:0005667 "transcription factor
complex" evidence=IEA] [GO:0043550 "regulation of lipid kinase
activity" evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0000080 "G1 phase of mitotic cell cycle" evidence=TAS]
[GO:0000278 "mitotic cell cycle" evidence=TAS] [GO:0005654
"nucleoplasm" evidence=TAS] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] InterPro:IPR002719 InterPro:IPR002720 Pfam:PF01857
Pfam:PF01858 GO:GO:0005737 Pathway_Interaction_DB:foxopathway
Reactome:REACT_115566 GO:GO:0005654 GO:GO:0005730 GO:GO:0006355
GO:GO:0003677 GO:GO:0000785 GO:GO:0006351 GO:GO:0016568
GO:GO:0005667 GO:GO:0051726 Gene3D:1.10.472.10 InterPro:IPR013763
SMART:SM00385 SUPFAM:SSF47954 GO:GO:0000080 eggNOG:NOG296920
InterPro:IPR024599 Pfam:PF11934 HOGENOM:HOG000273892
HOVERGEN:HBG017710 GO:GO:0043550 EMBL:X76061 EMBL:S67171
EMBL:X74594 EMBL:U53220 IPI:IPI00304028 PIR:A49370
RefSeq:NP_005602.3 UniGene:Hs.513609 ProteinModelPortal:Q08999
SMR:Q08999 DIP:DIP-425N IntAct:Q08999 MINT:MINT-102310
STRING:Q08999 PhosphoSite:Q08999 DMDM:116242746 PaxDb:Q08999
PRIDE:Q08999 DNASU:5934 Ensembl:ENST00000262133 GeneID:5934
KEGG:hsa:5934 UCSC:uc002ehi.4 CTD:5934 GeneCards:GC16P053467
HGNC:HGNC:9894 HPA:CAB016547 HPA:HPA019703 MIM:180203
neXtProt:NX_Q08999 PharmGKB:PA34258 InParanoid:Q08999 KO:K16332
OMA:PPGNFPF OrthoDB:EOG4PNXG9 PhylomeDB:Q08999 ChiTaRS:RBL2
GenomeRNAi:5934 NextBio:23132 ArrayExpress:Q08999 Bgee:Q08999
CleanEx:HS_RBL2 Genevestigator:Q08999 GermOnline:ENSG00000103479
Uniprot:Q08999
Length = 1139
Score = 238 (88.8 bits), Expect = 2.0e-29, Sum P(2) = 2.0e-29
Identities = 67/203 (33%), Positives = 102/203 (50%)
Query: 31 TPVRTAQNTASNWLKTVIAPLPSKPSAELEKFLSLGSVSIANEVESGANIVLEAIFPSIK 90
TPV TA ++ S L T++ L + PS +LE+ L S + + + E +
Sbjct: 417 TPVSTATHSLSR-LHTMLTGLRNAPSEKLEQILRTCSRDPTQAIANRLKEMFEIYSQHFQ 475
Query: 91 LGERLFNWSLLNVNLMDSLWSGQERTEALKLYYKVLESICASEAGKSSSRDLSGLLTNEK 150
E ++S N + S R + LYYKVLES+ E + DLSG+L +
Sbjct: 476 PDE---DFS----NCAKEIASKHFRFAEM-LYYKVLESVIEQEQKRLGDMDLSGILEQDA 527
Query: 151 FHRCMLACSAELVSMARTRVSILFPLILERAGITAFDMCKVTESFIRHEDSLPRELMRHL 210
FHR +LAC E+V+ + FP I E + + KV E FIR ED L RE+++HL
Sbjct: 528 FHRSLLACCLEVVTFSYKPPGN-FPFITEIFDVPLYHFYKVIEVFIRAEDGLCREVVKHL 586
Query: 211 NSLEETMLESMVWEKGSSLYNSL 233
N +EE +L+ + W+ S L+ +
Sbjct: 587 NQIEEQILDHLAWKPESPLWEKI 609
Score = 171 (65.3 bits), Expect = 2.0e-29, Sum P(2) = 2.0e-29
Identities = 42/147 (28%), Positives = 73/147 (49%)
Query: 321 QVKLQPVTPSSQTAFMSPVQSKTPKDGGIKMDAAVTFLFNKMTKLGAVRINSMAERLKLS 380
QV +Q ++P Q QS T + ++++ F K+ L AVR+ + +L +S
Sbjct: 804 QVAIQQISPGGQQQKQG--QSVTSSSNRPRKTSSLSLFFRKVYHLAAVRLRDLCAKLDIS 861
Query: 381 QQIREKTYLLFRQILVEKTYLFFNRHIDLIILCCFCGVAKINKLKLKFEEITDNYVKEPQ 440
++R+K + F +++ L +RH+D +++C +AK+ K F+ I Y +PQ
Sbjct: 862 DELRKKIWTCFEFSIIQCPELMMDRHLDQLLMCAIYVMAKVTKEDKSFQNIMRCYRTQPQ 921
Query: 441 CRSQDFGFVFAGWLSKHKGKNRENYKS 467
RSQ V+ L K K K R + S
Sbjct: 922 ARSQ----VYRSVLIKGKRKRRNSGSS 944
Score = 38 (18.4 bits), Expect = 4.0e-08, Sum P(2) = 4.0e-08
Identities = 13/41 (31%), Positives = 19/41 (46%)
Query: 17 PASQSNGSMAKMTPTP------VRTAQNTASNWLKTVIAPL 51
P +G +TP P + TA TA+N +TV P+
Sbjct: 708 PVQNVSGETVSVTPVPGQTLVTMATATVTANNG-QTVTIPV 747
Score = 37 (18.1 bits), Expect = 1.9e-15, Sum P(2) = 1.9e-15
Identities = 7/13 (53%), Positives = 9/13 (69%)
Query: 290 KRLCDENGSKLTK 302
KR+C EN S L +
Sbjct: 1115 KRICPENHSALLR 1127
Score = 37 (18.1 bits), Expect = 1.9e-15, Sum P(2) = 1.9e-15
Identities = 8/20 (40%), Positives = 12/20 (60%)
Query: 329 PSSQTAFMSPVQSKTPKDGG 348
P+S T V++ +P DGG
Sbjct: 674 PASTTRRRLFVENDSPSDGG 693
>MGI|MGI:105085 [details] [associations]
symbol:Rbl2 "retinoblastoma-like 2" species:10090 "Mus
musculus" [GO:0000785 "chromatin" evidence=ISO] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005667 "transcription
factor complex" evidence=IDA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0007049 "cell
cycle" evidence=IEA] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0043550 "regulation of lipid kinase activity"
evidence=ISO] [GO:0051726 "regulation of cell cycle" evidence=IEA]
InterPro:IPR002719 InterPro:IPR002720 Pfam:PF01857 Pfam:PF01858
EMBL:U50850 MGI:MGI:105085 GO:GO:0005737 GO:GO:0005730
GO:GO:0006355 GO:GO:0003677 GO:GO:0000785 GO:GO:0006351
GO:GO:0016568 GO:GO:0005667 GO:GO:0007049 GO:GO:0051726
Gene3D:1.10.472.10 InterPro:IPR013763 SMART:SM00385 SUPFAM:SSF47954
eggNOG:NOG296920 GeneTree:ENSGT00530000063235 InterPro:IPR024599
Pfam:PF11934 HOGENOM:HOG000273892 HOVERGEN:HBG017710 GO:GO:0043550
CTD:5934 KO:K16332 OMA:PPGNFPF OrthoDB:EOG4PNXG9 EMBL:U36799
EMBL:U47333 EMBL:AK160027 IPI:IPI00317271 RefSeq:NP_035380.3
UniGene:Mm.235580 ProteinModelPortal:Q64700 SMR:Q64700
IntAct:Q64700 MINT:MINT-5181879 STRING:Q64700 PhosphoSite:Q64700
PaxDb:Q64700 PRIDE:Q64700 Ensembl:ENSMUST00000034091 GeneID:19651
KEGG:mmu:19651 InParanoid:Q3TVP8 NextBio:296912 Bgee:Q64700
CleanEx:MM_RBL2 Genevestigator:Q64700 GermOnline:ENSMUSG00000031666
Uniprot:Q64700
Length = 1135
Score = 240 (89.5 bits), Expect = 8.1e-29, Sum P(2) = 8.1e-29
Identities = 67/203 (33%), Positives = 104/203 (51%)
Query: 31 TPVRTAQNTASNWLKTVIAPLPSKPSAELEKFLSLGSVSIANEVESGANIVLEAIFPSIK 90
TPV TA ++ S L T+++ L + PS +LE+ L S + + E +
Sbjct: 414 TPVSTAAHSLSR-LHTMLSGLRNAPSEKLERILRSCSRDPTQAIADRLKEMYEIYSQHFQ 472
Query: 91 LGERLFNWSLLNVNLMDSLWSGQERTEALKLYYKVLESICASEAGKSSSRDLSGLLTNEK 150
E N+S N + + R + LYYKVLES+ E + DLSG+L ++
Sbjct: 473 PDE---NFS----NCAKEIANKHFRFAEM-LYYKVLESVIEQEQKRLGDMDLSGVLEHDA 524
Query: 151 FHRCMLACSAELVSMARTRVSILFPLILERAGITAFDMCKVTESFIRHEDSLPRELMRHL 210
FHR +LAC E+V+ + FP I E + + KV E FIR ED L RE+++HL
Sbjct: 525 FHRSLLACCLEVVAFSHKPPGN-FPFIAEIFDVPHYHFYKVIEVFIRAEDGLCREVVKHL 583
Query: 211 NSLEETMLESMVWEKGSSLYNSL 233
N +EE +L+ + W+ S L++ +
Sbjct: 584 NQIEEQILDHLAWKTKSPLWDRI 606
Score = 163 (62.4 bits), Expect = 8.1e-29, Sum P(2) = 8.1e-29
Identities = 46/171 (26%), Positives = 82/171 (47%)
Query: 297 GSKLTKHNSYATAMKVDSPVVDSHQVKLQPVTPSSQTAFMSPVQSKTPKDGGIKMDAAVT 356
GS L+ T ++V PV +Q ++P Q +P Q T + +++
Sbjct: 783 GS-LSSQQVTGTTLQVPGPVA------IQQISPGGQQ--QNPGQPLTSSSIRPRKTSSLA 833
Query: 357 FLFNKMTKLGAVRINSMAERLKLSQQIREKTYLLFRQILVEKTYLFFNRHIDLIILCCFC 416
F K+ L VR+ + +L +S ++R+K + F +++ T L +RH+D +++C
Sbjct: 834 LFFRKVYYLAGVRLRDLCIKLDISDELRKKIWTCFEFSIIQCTELMMDRHLDQLLMCAIY 893
Query: 417 GVAKINKLKLKFEEITDNYVKEPQCRSQDFGFVFAGWLSKHKGKNRENYKS 467
+AK+ K F+ I Y +PQ RSQ V+ L K K +N + +S
Sbjct: 894 VMAKVTKEDRSFQNIMRCYRTQPQARSQ----VYRSVLIKGKRRNSGSSES 940
Score = 37 (18.1 bits), Expect = 1.1e-15, Sum P(2) = 1.1e-15
Identities = 7/13 (53%), Positives = 9/13 (69%)
Query: 290 KRLCDENGSKLTK 302
KR+C EN S L +
Sbjct: 1111 KRICPENHSALLR 1123
>UNIPROTKB|A5D7M0 [details] [associations]
symbol:RBL2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0043550 "regulation of lipid kinase activity"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] [GO:0005667 "transcription factor
complex" evidence=IEA] [GO:0051726 "regulation of cell cycle"
evidence=IEA] InterPro:IPR002719 InterPro:IPR002720 Pfam:PF01857
Pfam:PF01858 GO:GO:0005737 GO:GO:0005730 GO:GO:0005667
GO:GO:0051726 Gene3D:1.10.472.10 InterPro:IPR013763 SMART:SM00385
SUPFAM:SSF47954 eggNOG:NOG296920 GeneTree:ENSGT00530000063235
InterPro:IPR024599 Pfam:PF11934 HOGENOM:HOG000273892
HOVERGEN:HBG017710 GO:GO:0043550 CTD:5934 KO:K16332 OMA:PPGNFPF
OrthoDB:EOG4PNXG9 EMBL:DAAA02046444 EMBL:BC140608 IPI:IPI00852473
RefSeq:NP_001091542.1 UniGene:Bt.17722 STRING:A5D7M0
Ensembl:ENSBTAT00000021613 GeneID:533294 KEGG:bta:533294
InParanoid:A5D7M0 NextBio:20875987 Uniprot:A5D7M0
Length = 1140
Score = 238 (88.8 bits), Expect = 1.2e-27, Sum P(2) = 1.2e-27
Identities = 69/203 (33%), Positives = 106/203 (52%)
Query: 31 TPVRTAQNTASNWLKTVIAPLPSKPSAELEKFLSLGSVSIANEVESGANIVLEAIFPSIK 90
TPV TA ++ S L T++ L + PS LE+ +L S S + ++ AN + E +
Sbjct: 417 TPVSTATHSLSR-LHTMLTGLRNAPSERLEQ--TLRSCS-RDPTQAIANRLKEMY----E 468
Query: 91 LGERLFNWSLLNVNLMDSLWSGQERTEALKLYYKVLESICASEAGKSSSRDLSGLLTNEK 150
+ + F N + S R + LYYKVLES+ E + DLSG+L +
Sbjct: 469 IYSQHFQSEEDGSNCAKDIASKHFRFAEM-LYYKVLESVIEQEQKRLGDMDLSGILEQDA 527
Query: 151 FHRCMLACSAELVSMARTRVSILFPLILERAGITAFDMCKVTESFIRHEDSLPRELMRHL 210
FHR +LAC E+V+ + FP I E + + KV E FIR ED L RE+++HL
Sbjct: 528 FHRSLLACCLEVVTFSYKPPGN-FPFITEIFDVPLYHFYKVIEVFIRAEDGLCREVVKHL 586
Query: 211 NSLEETMLESMVWEKGSSLYNSL 233
N +EE +L+ + W+ S L++ +
Sbjct: 587 NQIEEQILDHLAWKPESPLWDRI 609
Score = 154 (59.3 bits), Expect = 1.2e-27, Sum P(2) = 1.2e-27
Identities = 41/151 (27%), Positives = 76/151 (50%)
Query: 321 QVKLQPVTPSS-QTAFMSPVQSKTPKDGGIKMDAAVTFLFNKMTKLGAVRINSMAERLKL 379
QV +Q ++P Q P+ S + + + ++++ F K+ L VR+ + +L +
Sbjct: 804 QVAIQQISPGGPQQKQGLPLTSSSIRP---RKTSSLSLFFRKVYHLAGVRLRDLCAKLDI 860
Query: 380 SQQIREKTYLLFRQILVEKTYLFFNRHIDLIILCCFCGVAKINKLKLKFEEITDNYVKEP 439
S ++R+K + F +++ L +RH+D +++C +AK+ K F+ I Y +P
Sbjct: 861 SDELRKKIWTCFEFSIIQCPELMMDRHLDQLLMCAIYVMAKVTKEDKSFQNIMRCYRTQP 920
Query: 440 QCRSQDFGFVFAGWLSKHKGKNRENYKSIDA 470
Q RSQ V+ L K K + R N S D+
Sbjct: 921 QARSQ----VYRSVLIKGK-RRRRNSGSSDS 946
Score = 37 (18.1 bits), Expect = 1.9e-15, Sum P(2) = 1.9e-15
Identities = 7/13 (53%), Positives = 9/13 (69%)
Query: 290 KRLCDENGSKLTK 302
KR+C EN S L +
Sbjct: 1116 KRICPENHSALLR 1128
>RGD|3541 [details] [associations]
symbol:Rbl2 "retinoblastoma-like 2" species:10116 "Rattus
norvegicus" [GO:0000785 "chromatin" evidence=IDA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IEA;ISO] [GO:0005667 "transcription
factor complex" evidence=IEA;ISO] [GO:0005730 "nucleolus"
evidence=IEA;ISO] [GO:0005737 "cytoplasm" evidence=IEA;ISO]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0016568 "chromatin
modification" evidence=IEA] [GO:0043550 "regulation of lipid kinase
activity" evidence=IEA;ISO] [GO:0051726 "regulation of cell cycle"
evidence=IEA] InterPro:IPR002719 InterPro:IPR002720 Pfam:PF01857
Pfam:PF01858 RGD:3541 GO:GO:0005737 GO:GO:0005730 GO:GO:0006355
GO:GO:0003677 GO:GO:0000785 GO:GO:0006351 GO:GO:0016568 GO:GO:0005667
GO:GO:0007049 GO:GO:0051726 Gene3D:1.10.472.10 InterPro:IPR013763
SMART:SM00385 SUPFAM:SSF47954 eggNOG:NOG296920 InterPro:IPR024599
Pfam:PF11934 HOGENOM:HOG000273892 HOVERGEN:HBG017710 GO:GO:0043550
CTD:5934 KO:K16332 OrthoDB:EOG4PNXG9 EMBL:D55627 IPI:IPI00195120
RefSeq:NP_112356.1 UniGene:Rn.11020 ProteinModelPortal:O55081
IntAct:O55081 STRING:O55081 PhosphoSite:O55081 PRIDE:O55081
GeneID:81758 KEGG:rno:81758 InParanoid:O55081 NextBio:615534
Genevestigator:O55081 GermOnline:ENSRNOG00000012153 Uniprot:O55081
Length = 1135
Score = 234 (87.4 bits), Expect = 2.7e-27, Sum P(2) = 2.7e-27
Identities = 66/203 (32%), Positives = 101/203 (49%)
Query: 31 TPVRTAQNTASNWLKTVIAPLPSKPSAELEKFLSLGSVSIANEVESGANIVLEAIFPSIK 90
TPV TA ++ N L T++A L + PS +LE+ L S + + E +
Sbjct: 414 TPVSTATHSL-NRLHTMLAGLRNAPSEKLEQILRSCSRDPTRAIADRLREMYEIYSQHFQ 472
Query: 91 LGERLFNWSLLNVNLMDSLWSGQERTEALKLYYKVLESICASEAGKSSSRDLSGLLTNEK 150
E + N + N + A LYYKVLES+ E + DLSG+L +
Sbjct: 473 PDENVSNCAKEMAN--------KHFRFAEMLYYKVLESVIEQEQKRLGDMDLSGVLEQDA 524
Query: 151 FHRCMLACSAELVSMARTRVSILFPLILERAGITAFDMCKVTESFIRHEDSLPRELMRHL 210
FH+ +LAC E+V+ + FP I E + + KV E FIR ED L RE+++HL
Sbjct: 525 FHKSLLACCLEVVAFSYKPPGN-FPFIAEIFDVPHYHFYKVIEVFIRAEDGLCREVVKHL 583
Query: 211 NSLEETMLESMVWEKGSSLYNSL 233
N +EE +L+ + W+ S L++ +
Sbjct: 584 NQIEEQILDHLAWKTKSPLWDRI 606
Score = 155 (59.6 bits), Expect = 2.7e-27, Sum P(2) = 2.7e-27
Identities = 44/174 (25%), Positives = 83/174 (47%)
Query: 297 GSKLTKHNSYATAMKVDSPVVDSHQVKLQPVTPSSQTAFMS-PVQSKTPKDGGIKMDAAV 355
GS L+ T ++V PV +Q ++P Q P+ S + + + +++
Sbjct: 783 GS-LSSQQVTGTTLQVPGPVA------IQQISPGGQQQNQGQPLTSSSIRP---RKTSSL 832
Query: 356 TFLFNKMTKLGAVRINSMAERLKLSQQIREKTYLLFRQILVEKTYLFFNRHIDLIILCCF 415
+ F K+ L VR+ + +L +S ++R+K + F +V+ L +RH+D +++C
Sbjct: 833 SLFFRKVYYLAGVRLRDLCTKLDISDELRKKIWTCFEFSIVQCPELMMDRHLDQLLMCAI 892
Query: 416 CGVAKINKLKLKFEEITDNYVKEPQCRSQDFGFVFAGWLSKHKG--KNRENYKS 467
+AK+ K F+ I Y +PQ RSQ + V ++ G +NR + S
Sbjct: 893 YVMAKVTKEDKSFQNIMRCYRTQPQARSQVYRSVLIKGKRRNSGSCENRSHQNS 946
Score = 39 (18.8 bits), Expect = 1.7e-06, Sum P(2) = 1.7e-06
Identities = 19/61 (31%), Positives = 26/61 (42%)
Query: 3 SPVE-ATNSTSPP-----CSPASQSNGSMAKMTPTP------VRTAQNTASNWLKTVIAP 50
SP E +T PP P +G +TP P + TA TA+N +TV P
Sbjct: 684 SPSEGSTAGRIPPQPLVNAVPVQNVSGETVSVTPVPGQTLVTMATATVTANNG-QTVTIP 742
Query: 51 L 51
+
Sbjct: 743 V 743
Score = 37 (18.1 bits), Expect = 5.4e-15, Sum P(2) = 5.4e-15
Identities = 7/13 (53%), Positives = 9/13 (69%)
Query: 290 KRLCDENGSKLTK 302
KR+C EN S L +
Sbjct: 1111 KRICPENHSALLR 1123
>UNIPROTKB|O55081 [details] [associations]
symbol:Rbl2 "Retinoblastoma-like protein 2" species:10116
"Rattus norvegicus" [GO:0051726 "regulation of cell cycle"
evidence=IEA] InterPro:IPR002719 InterPro:IPR002720 Pfam:PF01857
Pfam:PF01858 RGD:3541 GO:GO:0005737 GO:GO:0005730 GO:GO:0006355
GO:GO:0003677 GO:GO:0000785 GO:GO:0006351 GO:GO:0016568
GO:GO:0005667 GO:GO:0007049 GO:GO:0051726 Gene3D:1.10.472.10
InterPro:IPR013763 SMART:SM00385 SUPFAM:SSF47954 eggNOG:NOG296920
InterPro:IPR024599 Pfam:PF11934 HOGENOM:HOG000273892
HOVERGEN:HBG017710 GO:GO:0043550 CTD:5934 KO:K16332
OrthoDB:EOG4PNXG9 EMBL:D55627 IPI:IPI00195120 RefSeq:NP_112356.1
UniGene:Rn.11020 ProteinModelPortal:O55081 IntAct:O55081
STRING:O55081 PhosphoSite:O55081 PRIDE:O55081 GeneID:81758
KEGG:rno:81758 InParanoid:O55081 NextBio:615534
Genevestigator:O55081 GermOnline:ENSRNOG00000012153 Uniprot:O55081
Length = 1135
Score = 234 (87.4 bits), Expect = 2.7e-27, Sum P(2) = 2.7e-27
Identities = 66/203 (32%), Positives = 101/203 (49%)
Query: 31 TPVRTAQNTASNWLKTVIAPLPSKPSAELEKFLSLGSVSIANEVESGANIVLEAIFPSIK 90
TPV TA ++ N L T++A L + PS +LE+ L S + + E +
Sbjct: 414 TPVSTATHSL-NRLHTMLAGLRNAPSEKLEQILRSCSRDPTRAIADRLREMYEIYSQHFQ 472
Query: 91 LGERLFNWSLLNVNLMDSLWSGQERTEALKLYYKVLESICASEAGKSSSRDLSGLLTNEK 150
E + N + N + A LYYKVLES+ E + DLSG+L +
Sbjct: 473 PDENVSNCAKEMAN--------KHFRFAEMLYYKVLESVIEQEQKRLGDMDLSGVLEQDA 524
Query: 151 FHRCMLACSAELVSMARTRVSILFPLILERAGITAFDMCKVTESFIRHEDSLPRELMRHL 210
FH+ +LAC E+V+ + FP I E + + KV E FIR ED L RE+++HL
Sbjct: 525 FHKSLLACCLEVVAFSYKPPGN-FPFIAEIFDVPHYHFYKVIEVFIRAEDGLCREVVKHL 583
Query: 211 NSLEETMLESMVWEKGSSLYNSL 233
N +EE +L+ + W+ S L++ +
Sbjct: 584 NQIEEQILDHLAWKTKSPLWDRI 606
Score = 155 (59.6 bits), Expect = 2.7e-27, Sum P(2) = 2.7e-27
Identities = 44/174 (25%), Positives = 83/174 (47%)
Query: 297 GSKLTKHNSYATAMKVDSPVVDSHQVKLQPVTPSSQTAFMS-PVQSKTPKDGGIKMDAAV 355
GS L+ T ++V PV +Q ++P Q P+ S + + + +++
Sbjct: 783 GS-LSSQQVTGTTLQVPGPVA------IQQISPGGQQQNQGQPLTSSSIRP---RKTSSL 832
Query: 356 TFLFNKMTKLGAVRINSMAERLKLSQQIREKTYLLFRQILVEKTYLFFNRHIDLIILCCF 415
+ F K+ L VR+ + +L +S ++R+K + F +V+ L +RH+D +++C
Sbjct: 833 SLFFRKVYYLAGVRLRDLCTKLDISDELRKKIWTCFEFSIVQCPELMMDRHLDQLLMCAI 892
Query: 416 CGVAKINKLKLKFEEITDNYVKEPQCRSQDFGFVFAGWLSKHKG--KNRENYKS 467
+AK+ K F+ I Y +PQ RSQ + V ++ G +NR + S
Sbjct: 893 YVMAKVTKEDKSFQNIMRCYRTQPQARSQVYRSVLIKGKRRNSGSCENRSHQNS 946
Score = 39 (18.8 bits), Expect = 1.7e-06, Sum P(2) = 1.7e-06
Identities = 19/61 (31%), Positives = 26/61 (42%)
Query: 3 SPVE-ATNSTSPP-----CSPASQSNGSMAKMTPTP------VRTAQNTASNWLKTVIAP 50
SP E +T PP P +G +TP P + TA TA+N +TV P
Sbjct: 684 SPSEGSTAGRIPPQPLVNAVPVQNVSGETVSVTPVPGQTLVTMATATVTANNG-QTVTIP 742
Query: 51 L 51
+
Sbjct: 743 V 743
Score = 37 (18.1 bits), Expect = 5.4e-15, Sum P(2) = 5.4e-15
Identities = 7/13 (53%), Positives = 9/13 (69%)
Query: 290 KRLCDENGSKLTK 302
KR+C EN S L +
Sbjct: 1111 KRICPENHSALLR 1123
>UNIPROTKB|E2RIG3 [details] [associations]
symbol:RBL2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0043550 "regulation of lipid kinase activity"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] [GO:0005667 "transcription factor
complex" evidence=IEA] [GO:0051726 "regulation of cell cycle"
evidence=IEA] InterPro:IPR002719 InterPro:IPR002720 Pfam:PF01857
Pfam:PF01858 GO:GO:0005737 GO:GO:0005730 GO:GO:0005667
GO:GO:0051726 Gene3D:1.10.472.10 InterPro:IPR013763 SMART:SM00385
SUPFAM:SSF47954 GeneTree:ENSGT00530000063235 InterPro:IPR024599
Pfam:PF11934 GO:GO:0043550 CTD:5934 KO:K16332 OMA:PPGNFPF
EMBL:AAEX03001603 RefSeq:XP_535303.2 Ensembl:ENSCAFT00000015343
GeneID:478127 KEGG:cfa:478127 Uniprot:E2RIG3
Length = 1139
Score = 232 (86.7 bits), Expect = 5.8e-27, Sum P(2) = 5.8e-27
Identities = 66/203 (32%), Positives = 100/203 (49%)
Query: 31 TPVRTAQNTASNWLKTVIAPLPSKPSAELEKFLSLGSVSIANEVESGANIVLEAIFPSIK 90
TPV TA ++ S L T++ L + PS +LE+ L S + + + E +
Sbjct: 417 TPVSTATHSLSR-LHTMLTGLRNAPSEKLEQILRTCSRDPTQAIANRLKEMYEIYSQHCQ 475
Query: 91 LGERLFNWSLLNVNLMDSLWSGQERTEALKLYYKVLESICASEAGKSSSRDLSGLLTNEK 150
E N + S R + LYYKVLES+ E + DLSG+L +
Sbjct: 476 PDEDFSN--------SKEIASKHFRFAEM-LYYKVLESVIEQEQKRLGDMDLSGILEQDA 526
Query: 151 FHRCMLACSAELVSMARTRVSILFPLILERAGITAFDMCKVTESFIRHEDSLPRELMRHL 210
FHR +LAC E+V+ + FP I E + + KV E FIR ED L RE+++HL
Sbjct: 527 FHRSLLACCLEVVTFSYKPPGN-FPFITEIFDVPLYHFYKVIEVFIRAEDGLCREVVKHL 585
Query: 211 NSLEETMLESMVWEKGSSLYNSL 233
N +EE +L+ + W+ S L++ +
Sbjct: 586 NQIEEQILDHLAWKPESPLWDRI 608
Score = 154 (59.3 bits), Expect = 5.8e-27, Sum P(2) = 5.8e-27
Identities = 39/147 (26%), Positives = 70/147 (47%)
Query: 321 QVKLQPVTPSSQTAFMSPVQSKTPKDGGIKMDAAVTFLFNKMTKLGAVRINSMAERLKLS 380
QV +Q ++P P T + ++++ F K+ L VR+ + +L +S
Sbjct: 803 QVAIQQISPGGHQQKQGP--PLTGSSIRPRKTSSLSLFFRKVYHLAGVRLRDLCAKLDIS 860
Query: 381 QQIREKTYLLFRQILVEKTYLFFNRHIDLIILCCFCGVAKINKLKLKFEEITDNYVKEPQ 440
++R+K + F +++ L +RH+D +++C +AK+ K F+ I Y +PQ
Sbjct: 861 DELRKKIWTCFEFSIIQCPELMMDRHLDQLLMCAIYVMAKVTKEDKSFQNIMRCYRTQPQ 920
Query: 441 CRSQDFGFVFAGWLSKHKGKNRENYKS 467
RSQ V+ L K K K R + S
Sbjct: 921 ARSQ----VYRSVLIKGKRKRRNSGSS 943
Score = 38 (18.4 bits), Expect = 2.8e-06, Sum P(2) = 2.8e-06
Identities = 13/41 (31%), Positives = 19/41 (46%)
Query: 17 PASQSNGSMAKMTPTP------VRTAQNTASNWLKTVIAPL 51
P +G +TP P + TA TA+N +TV P+
Sbjct: 707 PVQNVSGETVSVTPVPGQTLVTMATATVTANNG-QTVTIPV 746
Score = 37 (18.1 bits), Expect = 9.2e-15, Sum P(2) = 9.2e-15
Identities = 7/13 (53%), Positives = 9/13 (69%)
Query: 290 KRLCDENGSKLTK 302
KR+C EN S L +
Sbjct: 1115 KRICPENHSALLR 1127
>RGD|1595511 [details] [associations]
symbol:Rbl1 "retinoblastoma-like 1 (p107)" species:10116 "Rattus
norvegicus" [GO:0000122 "negative regulation of transcription from
RNA polymerase II promoter" evidence=ISO] [GO:0005634 "nucleus"
evidence=IEA;ISO] [GO:0005667 "transcription factor complex"
evidence=ISO] [GO:0008134 "transcription factor binding"
evidence=ISO] [GO:0043550 "regulation of lipid kinase activity"
evidence=ISO] [GO:0051726 "regulation of cell cycle" evidence=IEA]
InterPro:IPR002719 InterPro:IPR002720 Pfam:PF01857 Pfam:PF01858
RGD:1595511 GO:GO:0005634 GO:GO:0051726 Gene3D:1.10.472.10
InterPro:IPR013763 SMART:SM00385 SUPFAM:SSF47954 InterPro:IPR024599
Pfam:PF11934 InterPro:IPR015030 Pfam:PF08934 IPI:IPI00357966
IntAct:D3ZS62 Ensembl:ENSRNOT00000009528 UCSC:RGD:1595511
Uniprot:D3ZS62
Length = 1063
Score = 239 (89.2 bits), Expect = 1.8e-26, Sum P(2) = 1.8e-26
Identities = 74/220 (33%), Positives = 113/220 (51%)
Query: 31 TPVRTAQNTASNWLKTVIAPLPSKPSAELEKFLSLGSVSIANEVESGANIVLEAIFPSIK 90
TPV +A + S L++++A L S PS E+ L++ + N + NIV I I
Sbjct: 385 TPVASATQSVSR-LQSIVAGLKSAPS---EQLLTIFESCMRNPM---GNIV--KIVKGI- 434
Query: 91 LGERLFNWSLLNVNLMDS--LWSGQERTEALK-LYYKVLESICASEAGKSSSRDLSGLLT 147
GE + + + R + + LYYK+LE+I E + D+S LL
Sbjct: 435 -GETFCQHYTQSTDKQPGSHIDFAVNRLKLAEILYYKILETIMVQETRRLHGMDMSVLLE 493
Query: 148 NEKFHRCMLACSAELVSMARTRVSILFPLILERAGITAFDMCKVTESFIRHEDSLPRELM 207
+ FHR +LAC E+V A + FP I++ G+ F KV E IR E+ L R+++
Sbjct: 494 QDIFHRSLLACCLEIVLFAYSSPRT-FPWIIDVLGLQPFYFYKVIEVVIRSEEGLSRDMV 552
Query: 208 RHLNSLEETMLESMVWEKGSSLYNSLIASR---PDLQEEI 244
+HLNS+EE +LES+ W S+L+ +L AS P +E I
Sbjct: 553 KHLNSIEEQILESLAWTNNSALWEALRASANKVPSCEEVI 592
Score = 212 (79.7 bits), Expect = 2.0e-23, Sum P(2) = 2.0e-23
Identities = 73/245 (29%), Positives = 119/245 (48%)
Query: 121 LYYKVLESICASEAGKSSSRDLSGLLTNEKFHRCMLACSAELVSMARTRVSILFPLILER 180
LYYK+LE+I E + D+S LL + FHR +LAC E+V A + FP I++
Sbjct: 467 LYYKILETIMVQETRRLHGMDMSVLLEQDIFHRSLLACCLEIVLFAYSSPRT-FPWIIDV 525
Query: 181 AGITAFDMCKVTESFIRHEDSLPRELMRHLNSLEETMLESMVWEKGSSLYNSLIASR--- 237
G+ F KV E IR E+ L R++++HLNS+EE +LES+ W S+L+ +L AS
Sbjct: 526 LGLQPFYFYKVIEVVIRSEEGLSRDMVKHLNSIEEQILESLAWTNNSALWEALRASANKV 585
Query: 238 PDLQEEI--KRLK----------LLAEPM-PSLHEISMNNHLASGVLAYQH------NLH 278
P +E I + L PM P +H SG L ++H
Sbjct: 586 PSCEEVIFPNNFEIGNGGSVQGHLPMMPMSPIIHPRVKEVRTDSGSLRKDMQPLSPISVH 645
Query: 279 KH--KPSTGNNGMKRLCDENGSKLTKHNSYATAMKVDSPVVDSHQVKLQPVTPSSQTAFM 336
+ P+ G+ +RL ++ K T ++ + + Q+K+ P + ++++ +
Sbjct: 646 ERYSSPAAGS-AKRRLFGDDPPKETL---------MEKIMAEGTQLKIAPSSVTAESLSI 695
Query: 337 SPVQS 341
SP Q+
Sbjct: 696 SPGQA 700
Score = 141 (54.7 bits), Expect = 1.8e-26, Sum P(2) = 1.8e-26
Identities = 29/94 (30%), Positives = 51/94 (54%)
Query: 350 KMDAAVTFLFNKMTKLGAVRINSMAERLKLSQQIREKTYLLFRQILVEKTYLFFNRHIDL 409
K ++ + K+ L +VR+ + +L +S ++R K + F LV L +RH+D
Sbjct: 782 KRTGSLALFYRKVYHLASVRLRDLCLKLDVSNELRRKIWTCFEFTLVHCPDLMKDRHLDQ 841
Query: 410 IILCCFCGVAKINKLKLKFEEITDNYVKEPQCRS 443
++LC F +AK+ K + F+EI +Y +PQ S
Sbjct: 842 LLLCAFYIMAKVTKEERTFQEIMKSYRNQPQANS 875
Score = 39 (18.8 bits), Expect = 7.7e-16, Sum P(2) = 7.7e-16
Identities = 8/13 (61%), Positives = 8/13 (61%)
Query: 290 KRLCDENGSKLTK 302
KRLC EN L K
Sbjct: 1039 KRLCQENDDVLLK 1051
>UNIPROTKB|E2RQ78 [details] [associations]
symbol:RBL1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0051726 "regulation of cell cycle"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR002719 InterPro:IPR002720 Pfam:PF01857 Pfam:PF01858
GO:GO:0005634 GO:GO:0051726 Gene3D:1.10.472.10 InterPro:IPR013763
SMART:SM00385 SUPFAM:SSF47954 GeneTree:ENSGT00530000063235
InterPro:IPR024599 Pfam:PF11934 InterPro:IPR015030 Pfam:PF08934
EMBL:AAEX03013918 Ensembl:ENSCAFT00000013845 NextBio:20852741
Uniprot:E2RQ78
Length = 1068
Score = 229 (85.7 bits), Expect = 2.8e-26, Sum P(2) = 2.8e-26
Identities = 66/209 (31%), Positives = 108/209 (51%)
Query: 31 TPVRTAQNTASNWLKTVIAPLPSKPSAELEKFLSLGSVSIANEVESGANIVLEAIFPSIK 90
TPV +A + S L++++A L + PS E+ +++ I N +E+ IV
Sbjct: 385 TPVASATQSVSR-LQSIVAGLKNAPS---EQLINIFESCIRNPMENIMKIVKG------- 433
Query: 91 LGERLFNWSLLNVNLMDS--LWSGQERTEALK-LYYKVLESICASEAGKSSSRDLSGLLT 147
+GE + + + R + + LYYK+LE++ E + D+S LL
Sbjct: 434 IGETFCQHYTQSTDEQPGSHIDFAINRLKLAEILYYKILETVMVQETRRLHGMDMSVLLE 493
Query: 148 NEKFHRCMLACSAELVSMARTRVSILFPLILERAGITAFDMCKVTESFIRHEDSLPRELM 207
+ FHR ++AC E+V A + FP I+E + F KV E IR E+ L R+++
Sbjct: 494 QDIFHRSLMACCLEIVLFAYSSPRT-FPWIIEVLNLRPFYFYKVIEVVIRSEEGLSRDMV 552
Query: 208 RHLNSLEETMLESMVWEKGSSLYNSLIAS 236
+HLNS+EE +LES+ W S+L+ +L AS
Sbjct: 553 KHLNSIEEQILESLAWSHDSALWEALQAS 581
Score = 150 (57.9 bits), Expect = 2.8e-26, Sum P(2) = 2.8e-26
Identities = 43/140 (30%), Positives = 71/140 (50%)
Query: 307 ATAMKVDSPVVDSHQVKLQPVTPSSQTAFMSPVQSKTPKDGGI---KMDAAVTFLFNKMT 363
A KV+SP+ + Q L +P QT ++ Q P GI K ++ + K+
Sbjct: 742 AQESKVESPISLTAQ-SLIGASPK-QT-HLTKAQEAHPT--GISKPKRTGSLALFYRKVY 796
Query: 364 KLGAVRINSMAERLKLSQQIREKTYLLFRQILVEKTYLFFNRHIDLIILCCFCGVAKINK 423
L +VR+ + +L +S ++R K + F LV L +RH+D ++LC F +AK+ K
Sbjct: 797 HLASVRLRDLCLKLDVSNELRRKIWTCFEFTLVHCPDLMKDRHLDQLLLCAFYIMAKVTK 856
Query: 424 LKLKFEEITDNYVKEPQCRS 443
+ F+EI +Y +PQ S
Sbjct: 857 EERTFQEIMKSYRNQPQANS 876
Score = 39 (18.8 bits), Expect = 1.0e-14, Sum P(2) = 1.0e-14
Identities = 8/13 (61%), Positives = 8/13 (61%)
Query: 290 KRLCDENGSKLTK 302
KRLC EN L K
Sbjct: 1044 KRLCQENDDVLLK 1056
Score = 37 (18.1 bits), Expect = 1.7e-14, Sum P(2) = 1.7e-14
Identities = 14/59 (23%), Positives = 23/59 (38%)
Query: 315 PVVDSHQVKLQPVTPSSQTAFMSPVQSKTPKDGGIKMDAAVTFLFNKMTKLGAVRINSM 373
P+ +K QP +P + S S G+ +A+ + FN IN+M
Sbjct: 962 PLSPFPHIKQQPGSPRRISQQHSIYVSPHKNGSGLTPRSALLYKFNGSPSKSLKDINNM 1020
>UNIPROTKB|F1PBK3 [details] [associations]
symbol:RBL1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0051726 "regulation of cell cycle"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR002719 InterPro:IPR002720 Pfam:PF01857 Pfam:PF01858
GO:GO:0005634 GO:GO:0051726 Gene3D:1.10.472.10 InterPro:IPR013763
SMART:SM00385 SUPFAM:SSF47954 GeneTree:ENSGT00530000063235
KO:K04681 InterPro:IPR024599 Pfam:PF11934 CTD:5933 OMA:RRDMQPL
InterPro:IPR015030 Pfam:PF08934 EMBL:AAEX03013918
RefSeq:XP_534412.2 ProteinModelPortal:F1PBK3
Ensembl:ENSCAFT00000013851 GeneID:477221 KEGG:cfa:477221
Uniprot:F1PBK3
Length = 1068
Score = 229 (85.7 bits), Expect = 2.8e-26, Sum P(2) = 2.8e-26
Identities = 66/209 (31%), Positives = 108/209 (51%)
Query: 31 TPVRTAQNTASNWLKTVIAPLPSKPSAELEKFLSLGSVSIANEVESGANIVLEAIFPSIK 90
TPV +A + S L++++A L + PS E+ +++ I N +E+ IV
Sbjct: 385 TPVASATQSVSR-LQSIVAGLKNAPS---EQLINIFESCIRNPMENIMKIVKG------- 433
Query: 91 LGERLFNWSLLNVNLMDS--LWSGQERTEALK-LYYKVLESICASEAGKSSSRDLSGLLT 147
+GE + + + R + + LYYK+LE++ E + D+S LL
Sbjct: 434 IGETFCQHYTQSTDEQPGSHIDFAINRLKLAEILYYKILETVMVQETRRLHGMDMSVLLE 493
Query: 148 NEKFHRCMLACSAELVSMARTRVSILFPLILERAGITAFDMCKVTESFIRHEDSLPRELM 207
+ FHR ++AC E+V A + FP I+E + F KV E IR E+ L R+++
Sbjct: 494 QDIFHRSLMACCLEIVLFAYSSPRT-FPWIIEVLNLRPFYFYKVIEVVIRSEEGLSRDMV 552
Query: 208 RHLNSLEETMLESMVWEKGSSLYNSLIAS 236
+HLNS+EE +LES+ W S+L+ +L AS
Sbjct: 553 KHLNSIEEQILESLAWSHDSALWEALQAS 581
Score = 150 (57.9 bits), Expect = 2.8e-26, Sum P(2) = 2.8e-26
Identities = 43/140 (30%), Positives = 71/140 (50%)
Query: 307 ATAMKVDSPVVDSHQVKLQPVTPSSQTAFMSPVQSKTPKDGGI---KMDAAVTFLFNKMT 363
A KV+SP+ + Q L +P QT ++ Q P GI K ++ + K+
Sbjct: 742 AQESKVESPISLTAQ-SLIGASPK-QT-HLTKAQEAHPT--GISKPKRTGSLALFYRKVY 796
Query: 364 KLGAVRINSMAERLKLSQQIREKTYLLFRQILVEKTYLFFNRHIDLIILCCFCGVAKINK 423
L +VR+ + +L +S ++R K + F LV L +RH+D ++LC F +AK+ K
Sbjct: 797 HLASVRLRDLCLKLDVSNELRRKIWTCFEFTLVHCPDLMKDRHLDQLLLCAFYIMAKVTK 856
Query: 424 LKLKFEEITDNYVKEPQCRS 443
+ F+EI +Y +PQ S
Sbjct: 857 EERTFQEIMKSYRNQPQANS 876
Score = 39 (18.8 bits), Expect = 1.0e-14, Sum P(2) = 1.0e-14
Identities = 8/13 (61%), Positives = 8/13 (61%)
Query: 290 KRLCDENGSKLTK 302
KRLC EN L K
Sbjct: 1044 KRLCQENDDVLLK 1056
Score = 37 (18.1 bits), Expect = 1.7e-14, Sum P(2) = 1.7e-14
Identities = 14/59 (23%), Positives = 23/59 (38%)
Query: 315 PVVDSHQVKLQPVTPSSQTAFMSPVQSKTPKDGGIKMDAAVTFLFNKMTKLGAVRINSM 373
P+ +K QP +P + S S G+ +A+ + FN IN+M
Sbjct: 962 PLSPFPHIKQQPGSPRRISQQHSIYVSPHKNGSGLTPRSALLYKFNGSPSKSLKDINNM 1020
>UNIPROTKB|E1BQ59 [details] [associations]
symbol:RBL1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0051726 "regulation of cell cycle" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0005667 "transcription
factor complex" evidence=IEA] [GO:0008134 "transcription factor
binding" evidence=IEA] [GO:0043550 "regulation of lipid kinase
activity" evidence=IEA] InterPro:IPR002719 InterPro:IPR002720
Pfam:PF01857 Pfam:PF01858 GO:GO:0005667 GO:GO:0000122 GO:GO:0051726
Gene3D:1.10.472.10 InterPro:IPR013763 SMART:SM00385 SUPFAM:SSF47954
GeneTree:ENSGT00530000063235 InterPro:IPR024599 Pfam:PF11934
OMA:RRDMQPL GO:GO:0043550 InterPro:IPR015030 Pfam:PF08934
EMBL:AADN02019534 EMBL:AADN02019535 IPI:IPI00588682
Ensembl:ENSGALT00000002032 Uniprot:E1BQ59
Length = 1064
Score = 240 (89.5 bits), Expect = 3.5e-26, Sum P(2) = 3.5e-26
Identities = 72/220 (32%), Positives = 114/220 (51%)
Query: 31 TPVRTAQNTASNWLKTVIAPLPSKPSAELEKFLSLGSVSIANEVESGANIVLEAIFPSIK 90
TPV +A + S L+ ++A L + PS E +++ N ES N V E
Sbjct: 384 TPVASATQSVSR-LQNIVAGLKNAPS---ELLMAIFESCARNPAESIVNRVRE------- 432
Query: 91 LGERLF-NWSLLNVNLMDS-LWSGQERTEALK-LYYKVLESICASEAGKSSSRDLSGLLT 147
+GE +++ L S + R + + LYYK+LE+I E + +D++ LL
Sbjct: 433 IGETFCRSYTQPTDELPGSHIDFAVNRLKLAEILYYKILETIMVQEMRRLHGKDMTALLE 492
Query: 148 NEKFHRCMLACSAELVSMARTRVSILFPLILERAGITAFDMCKVTESFIRHEDSLPRELM 207
+ FHR ++AC E+V A + FP I+E + F KV E IR E+ L R+++
Sbjct: 493 QDVFHRSLMACCLEIVLFAYSSPRT-FPWIIEVLDLRPFYFYKVIEVLIRSEEGLSRDMV 551
Query: 208 RHLNSLEETMLESMVWEKGSSLYNSLIASR---PDLQEEI 244
+HLNS+EE +LES+ W + S+L+ +L AS P +E I
Sbjct: 552 KHLNSIEEQILESLAWTRDSALWTALQASENRVPTCEEVI 591
Score = 137 (53.3 bits), Expect = 3.5e-26, Sum P(2) = 3.5e-26
Identities = 28/94 (29%), Positives = 50/94 (53%)
Query: 350 KMDAAVTFLFNKMTKLGAVRINSMAERLKLSQQIREKTYLLFRQILVEKTYLFFNRHIDL 409
K ++ + K+ L +VR+ + +L +S +R K + F LV L +RH+D
Sbjct: 772 KKTGSLALFYRKVYHLASVRLRDLCLKLDVSNDLRRKIWTCFEFTLVHCADLMKDRHLDQ 831
Query: 410 IILCCFCGVAKINKLKLKFEEITDNYVKEPQCRS 443
++LC F +AK+ K + F++I +Y +PQ S
Sbjct: 832 LLLCAFYIMAKVTKEERTFQDIMKSYRNQPQANS 865
Score = 52 (23.4 bits), Expect = 2.6e-17, Sum P(2) = 2.6e-17
Identities = 20/58 (34%), Positives = 24/58 (41%)
Query: 248 KLLAEPMPSLHEISMNNHLASGVLAYQHNLHKHK---PSTGNNGMKRLCDENGSKLTK 302
K P SL +I NN + G +H K S + MKRLC EN L K
Sbjct: 1001 KFNGSPSKSLKDI--NNMIKQG----EHRSKKRAITIDSDTESPMKRLCQENDDVLLK 1052
Score = 38 (18.4 bits), Expect = 7.5e-16, Sum P(2) = 7.5e-16
Identities = 15/63 (23%), Positives = 27/63 (42%)
Query: 315 PVVDSHQVKLQPVTPSSQTAFMSPVQSKTPKDGG-IKMDAAVTFLFNKMTKLGAVRINSM 373
P+ +K QPV+P + + V K+G + A+ + FN IN+M
Sbjct: 958 PLSPFPSIKQQPVSPR-RISQQHSVYVSPHKNGACLTPRTALLYKFNGSPSKSLKDINNM 1016
Query: 374 AER 376
++
Sbjct: 1017 IKQ 1019
>MGI|MGI:103300 [details] [associations]
symbol:Rbl1 "retinoblastoma-like 1 (p107)" species:10090 "Mus
musculus" [GO:0000122 "negative regulation of transcription from
RNA polymerase II promoter" evidence=IMP] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005667 "transcription factor complex" evidence=IDA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA] [GO:0008134
"transcription factor binding" evidence=ISO] [GO:0016568 "chromatin
modification" evidence=IEA] [GO:0043550 "regulation of lipid kinase
activity" evidence=ISO] [GO:0051726 "regulation of cell cycle"
evidence=IEA] InterPro:IPR002719 InterPro:IPR002720 Pfam:PF01857
Pfam:PF01858 MGI:MGI:103300 GO:GO:0006351 GO:GO:0016568
GO:GO:0005667 GO:GO:0000122 GO:GO:0007049 GO:GO:0051726
Gene3D:1.10.472.10 InterPro:IPR013763 SMART:SM00385 SUPFAM:SSF47954
EMBL:AL669828 eggNOG:NOG296920 GeneTree:ENSGT00530000063235
KO:K04681 InterPro:IPR024599 Pfam:PF11934 CTD:5933
HOGENOM:HOG000273892 HOVERGEN:HBG017710 OMA:RRDMQPL
OrthoDB:EOG4QZ7KB GO:GO:0043550 InterPro:IPR015030 Pfam:PF08934
EMBL:U33320 EMBL:U27177 EMBL:U27178 EMBL:AK156055 IPI:IPI00137864
IPI:IPI00352179 PIR:I49328 RefSeq:NP_001132988.1 RefSeq:NP_035379.2
UniGene:Mm.244671 ProteinModelPortal:Q64701 SMR:Q64701
IntAct:Q64701 STRING:Q64701 PhosphoSite:Q64701 PaxDb:Q64701
PRIDE:Q64701 Ensembl:ENSMUST00000029170 GeneID:19650 KEGG:mmu:19650
UCSC:uc008nos.2 InParanoid:Q3U1D4 NextBio:296908 Bgee:Q64701
CleanEx:MM_RBL1 Genevestigator:Q64701 GermOnline:ENSMUSG00000027641
Uniprot:Q64701
Length = 1063
Score = 229 (85.7 bits), Expect = 1.9e-25, Sum P(2) = 1.9e-25
Identities = 71/220 (32%), Positives = 112/220 (50%)
Query: 31 TPVRTAQNTASNWLKTVIAPLPSKPSAELEKFLSLGSVSIANEVESGANIVLEAIFPSIK 90
TPV +A + S L++++A L S PS E+ L++ + N + NI+ I I
Sbjct: 385 TPVASATQSVSR-LQSIVAGLKSAPS---EQLLNIFESCMRNPM---GNII--KIVKGI- 434
Query: 91 LGERLFNWSLLNVNLMDS--LWSGQERTEALK-LYYKVLESICASEAGKSSSRDLSGLLT 147
GE + + + R + + LYYK+LE+I E + D+S LL
Sbjct: 435 -GETFCQHYTQSTDKQPGSHIDFAVNRLKLAEILYYKILETIMVQETRRLHGMDMSVLLE 493
Query: 148 NEKFHRCMLACSAELVSMARTRVSILFPLILERAGITAFDMCKVTESFIRHEDSLPRELM 207
+ FH+ ++AC E+V A + FP I+E + F KV E IR E+ L R+++
Sbjct: 494 QDIFHKSLMACCLEIVLFAYSSPRT-FPWIIEVLDLQPFYFYKVIEVVIRSEEGLSRDMV 552
Query: 208 RHLNSLEETMLESMVWEKGSSLYNSLIASR---PDLQEEI 244
+HLNS+EE +LES+ W S+L+ +L AS P +E I
Sbjct: 553 KHLNSIEEQILESLAWTNNSALWEALHASANRVPSCEEVI 592
Score = 203 (76.5 bits), Expect = 1.6e-22, Sum P(2) = 1.6e-22
Identities = 71/245 (28%), Positives = 118/245 (48%)
Query: 121 LYYKVLESICASEAGKSSSRDLSGLLTNEKFHRCMLACSAELVSMARTRVSILFPLILER 180
LYYK+LE+I E + D+S LL + FH+ ++AC E+V A + FP I+E
Sbjct: 467 LYYKILETIMVQETRRLHGMDMSVLLEQDIFHKSLMACCLEIVLFAYSSPRT-FPWIIEV 525
Query: 181 AGITAFDMCKVTESFIRHEDSLPRELMRHLNSLEETMLESMVWEKGSSLYNSLIASR--- 237
+ F KV E IR E+ L R++++HLNS+EE +LES+ W S+L+ +L AS
Sbjct: 526 LDLQPFYFYKVIEVVIRSEEGLSRDMVKHLNSIEEQILESLAWTNNSALWEALHASANRV 585
Query: 238 PDLQEEI--KRLK----------LLAEPM-PSLHEISMNNHLASGVLAYQH------NLH 278
P +E I + L PM P +H SG L ++H
Sbjct: 586 PSCEEVIFPNNFEIGNGGNVQGHLPMMPMSPIIHPRVKEVRTDSGSLRQDMQPLSPISVH 645
Query: 279 KH--KPSTGNNGMKRLCDENGSKLTKHNSYATAMKVDSPVVDSHQVKLQPVTPSSQTAFM 336
+ P+ G+ +RL ++ K T +D + + ++K+ P + ++++ +
Sbjct: 646 ERYSSPAAGS-AKRRLFGDDPPKDTL---------MDKIMAEGTKLKIAPSSVTAESLSI 695
Query: 337 SPVQS 341
SP Q+
Sbjct: 696 SPGQA 700
Score = 142 (55.0 bits), Expect = 1.9e-25, Sum P(2) = 1.9e-25
Identities = 38/127 (29%), Positives = 66/127 (51%)
Query: 326 PVTPSSQTAF-MSPVQSKTPK--DG---GI---KMDAAVTFLFNKMTKLGAVRINSMAER 376
PV+ ++Q+ SP Q+ K D G+ K ++ + K+ L +VR+ + +
Sbjct: 749 PVSLTAQSLIGTSPKQTHLTKAQDAHLTGVSKPKRTGSLALFYRKVYHLASVRLRDLCLK 808
Query: 377 LKLSQQIREKTYLLFRQILVEKTYLFFNRHIDLIILCCFCGVAKINKLKLKFEEITDNYV 436
L +S ++R K + F LV L +RH+D ++LC F +AK+ K + F+EI +Y
Sbjct: 809 LDVSNELRRKIWTCFEFTLVHCPDLMKDRHLDQLLLCAFYIMAKVTKEERTFQEIMKSYR 868
Query: 437 KEPQCRS 443
+PQ S
Sbjct: 869 NQPQANS 875
Score = 41 (19.5 bits), Expect = 6.3e-15, Sum P(2) = 6.3e-15
Identities = 16/55 (29%), Positives = 22/55 (40%)
Query: 248 KLLAEPMPSLHEISMNNHLASGVLAYQHNLHKHKPSTGNNGMKRLCDENGSKLTK 302
K P SL +I NN + G + + ++ KRLC EN L K
Sbjct: 1000 KFNGSPSKSLKDI--NNMIRQGEQKTKKRVIAIS-GDADSPAKRLCQENDDVLLK 1051
Score = 39 (18.8 bits), Expect = 1.0e-14, Sum P(2) = 1.0e-14
Identities = 15/63 (23%), Positives = 26/63 (41%)
Query: 312 VDSPVVDSH-QVKLQPVTPSSQTAFMSPVQSKTPKDGGIKMDAAVTFLFNKMTKLGAVRI 370
+D+P + +K QP +P + S S G+ +A+ + FN I
Sbjct: 953 MDAPPLSPFPHIKQQPGSPRRISQQHSLYVSPHKNGAGLTPRSALLYKFNGSPSKSLKDI 1012
Query: 371 NSM 373
N+M
Sbjct: 1013 NNM 1015
>UNIPROTKB|P28749 [details] [associations]
symbol:RBL1 "Retinoblastoma-like protein 1" species:9606
"Homo sapiens" [GO:0051726 "regulation of cell cycle" evidence=IEA]
[GO:0016568 "chromatin modification" evidence=IEA] [GO:0019048
"virus-host interaction" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0005667 "transcription factor complex"
evidence=IEA] [GO:0043550 "regulation of lipid kinase activity"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0008134 "transcription factor binding" evidence=IPI]
[GO:0000080 "G1 phase of mitotic cell cycle" evidence=TAS]
[GO:0000278 "mitotic cell cycle" evidence=TAS] [GO:0005654
"nucleoplasm" evidence=TAS] [GO:0006351 "transcription,
DNA-dependent" evidence=TAS] [GO:0006367 "transcription initiation
from RNA polymerase II promoter" evidence=TAS] [GO:0007179
"transforming growth factor beta receptor signaling pathway"
evidence=TAS] [GO:0010467 "gene expression" evidence=TAS]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=TAS] Reactome:REACT_71
InterPro:IPR002719 InterPro:IPR002720 Pfam:PF01857 Pfam:PF01858
EMBL:CH471077 Reactome:REACT_111102 Reactome:REACT_115566
GO:GO:0019048 GO:GO:0005654 GO:GO:0045944 GO:GO:0016568
GO:GO:0005667 GO:GO:0000122 GO:GO:0051726 GO:GO:0007179
Pathway_Interaction_DB:smad2_3nuclearpathway GO:GO:0006367
Gene3D:1.10.472.10 InterPro:IPR013763 SMART:SM00385 SUPFAM:SSF47954
GO:GO:0000080 PDB:1H28 PDBsum:1H28 eggNOG:NOG296920 KO:K04681
InterPro:IPR024599 Pfam:PF11934 EMBL:L14812 EMBL:AK290380
EMBL:AL136172 EMBL:AL365505 EMBL:AL391114 EMBL:BC032247 EMBL:M74547
EMBL:S78664 IPI:IPI00005139 IPI:IPI00375494 PIR:A47319
RefSeq:NP_002886.2 RefSeq:NP_899662.1 UniGene:Hs.207745
ProteinModelPortal:P28749 SMR:P28749 DIP:DIP-148N IntAct:P28749
MINT:MINT-1353484 STRING:P28749 PhosphoSite:P28749 DMDM:90103515
PaxDb:P28749 PRIDE:P28749 DNASU:5933 Ensembl:ENST00000344359
Ensembl:ENST00000373664 GeneID:5933 KEGG:hsa:5933 UCSC:uc002xgi.3
UCSC:uc002xgj.1 CTD:5933 GeneCards:GC20M035624 H-InvDB:HIX0040570
HGNC:HGNC:9893 MIM:116957 neXtProt:NX_P28749 PharmGKB:PA34257
HOGENOM:HOG000273892 HOVERGEN:HBG017710 InParanoid:P28749
OMA:RRDMQPL OrthoDB:EOG4QZ7KB PhylomeDB:P28749
EvolutionaryTrace:P28749 GenomeRNAi:5933 NextBio:23126
ArrayExpress:P28749 Bgee:P28749 CleanEx:HS_RBL1
Genevestigator:P28749 GermOnline:ENSG00000080839 GO:GO:0043550
InterPro:IPR015030 Pfam:PF08934 Uniprot:P28749
Length = 1068
Score = 227 (85.0 bits), Expect = 2.0e-25, Sum P(2) = 2.0e-25
Identities = 67/209 (32%), Positives = 108/209 (51%)
Query: 31 TPVRTAQNTASNWLKTVIAPLPSKPSAELEKFLSLGSVSIANEVESGANIVLEAIFPSIK 90
TPV +A + S L++++A L + PS +L +++ + N VE NI+ I I
Sbjct: 385 TPVASATQSVSR-LQSIVAGLKNAPSDQL---INIFESCVRNPVE---NIM--KILKGI- 434
Query: 91 LGERLFNWSLLNVNLMDS--LWSGQERTEALK-LYYKVLESICASEAGKSSSRDLSGLLT 147
GE + + + R + + LYYK+LE++ E + D+S LL
Sbjct: 435 -GETFCQHYTQSTDEQPGSHIDFAVNRLKLAEILYYKILETVMVQETRRLHGMDMSVLLE 493
Query: 148 NEKFHRCMLACSAELVSMARTRVSILFPLILERAGITAFDMCKVTESFIRHEDSLPRELM 207
+ FHR ++AC E+V A + FP I+E + F KV E IR E+ L R+++
Sbjct: 494 QDIFHRSLMACCLEIVLFAYSSPRT-FPWIIEVLNLQPFYFYKVIEVVIRSEEGLSRDMV 552
Query: 208 RHLNSLEETMLESMVWEKGSSLYNSLIAS 236
+HLNS+EE +LES+ W S+L+ +L S
Sbjct: 553 KHLNSIEEQILESLAWSHDSALWEALQVS 581
Score = 144 (55.7 bits), Expect = 2.0e-25, Sum P(2) = 2.0e-25
Identities = 39/134 (29%), Positives = 66/134 (49%)
Query: 311 KVDSPV-VDSHQVKLQPVTPSSQTAFMSPVQSKTPKDGGIKMDAAVTFLFNKMTKLGAVR 369
KV SPV + +H L +P QT + + K ++ + K+ L +VR
Sbjct: 746 KVKSPVSLTAHS--LIGASPK-QTNLTKAQEVHSTGINRPKRTGSLALFYRKVYHLASVR 802
Query: 370 INSMAERLKLSQQIREKTYLLFRQILVEKTYLFFNRHIDLIILCCFCGVAKINKLKLKFE 429
+ + +L +S ++R K + F LV L +RH+D ++LC F +AK+ K + F+
Sbjct: 803 LRDLCLKLDVSNELRRKIWTCFEFTLVHCPDLMKDRHLDQLLLCAFYIMAKVTKEERTFQ 862
Query: 430 EITDNYVKEPQCRS 443
EI +Y +PQ S
Sbjct: 863 EIMKSYRNQPQANS 876
Score = 40 (19.1 bits), Expect = 1.4e-14, Sum P(2) = 1.4e-14
Identities = 16/55 (29%), Positives = 22/55 (40%)
Query: 248 KLLAEPMPSLHEISMNNHLASGVLAYQHNLHKHKPSTGNNGMKRLCDENGSKLTK 302
K P SL +I NN + G + + S + KR+C EN L K
Sbjct: 1005 KFNGSPSKSLKDI--NNMIRQGEQRTKKRVIAID-SDAESPAKRVCQENDDVLLK 1056
Score = 38 (18.4 bits), Expect = 2.2e-14, Sum P(2) = 2.2e-14
Identities = 15/63 (23%), Positives = 26/63 (41%)
Query: 312 VDSPVVDSH-QVKLQPVTPSSQTAFMSPVQSKTPKDGGIKMDAAVTFLFNKMTKLGAVRI 370
+D+P + +K QP +P + S S G+ +A+ + FN I
Sbjct: 958 MDAPPLSPFPHIKQQPGSPRRISQQHSIYISPHKNGSGLTPRSALLYKFNGSPSKSLKDI 1017
Query: 371 NSM 373
N+M
Sbjct: 1018 NNM 1020
>UNIPROTKB|E1BMR3 [details] [associations]
symbol:RBL1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0043550 "regulation of lipid kinase activity"
evidence=IEA] [GO:0008134 "transcription factor binding"
evidence=IEA] [GO:0005667 "transcription factor complex"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0051726
"regulation of cell cycle" evidence=IEA] InterPro:IPR002719
InterPro:IPR002720 Pfam:PF01857 Pfam:PF01858 GO:GO:0005667
GO:GO:0000122 GO:GO:0051726 Gene3D:1.10.472.10 InterPro:IPR013763
SMART:SM00385 SUPFAM:SSF47954 GeneTree:ENSGT00530000063235
KO:K04681 InterPro:IPR024599 Pfam:PF11934 CTD:5933 OMA:RRDMQPL
GO:GO:0043550 InterPro:IPR015030 Pfam:PF08934 EMBL:DAAA02036543
EMBL:DAAA02036542 EMBL:DAAA02036544 IPI:IPI00693192
RefSeq:NP_001179531.1 UniGene:Bt.26367 Ensembl:ENSBTAT00000015333
GeneID:524870 KEGG:bta:524870 NextBio:20874052 Uniprot:E1BMR3
Length = 1068
Score = 223 (83.6 bits), Expect = 2.1e-25, Sum P(2) = 2.1e-25
Identities = 69/221 (31%), Positives = 109/221 (49%)
Query: 31 TPVRTAQNTASNWLKTVIAPLPSKPSAELEKFLSLGSVSIANEVESGANIVLEAIFPSIK 90
TPV +A + S L++++A L + PS +L N ES +E I +K
Sbjct: 385 TPVASATQSVSR-LQSIVAGLKNAPSEQL-----------INIFESCMRNPMENIMKIVK 432
Query: 91 -LGERLFNWSLLNVNLMDS--LWSGQERTEALK-LYYKVLESICASEAGKSSSRDLSGLL 146
+GE + + + R + + LYYK+LE++ E + D+S LL
Sbjct: 433 GIGETFCQHYTQSTDEQPGSHIDFAVNRLKLAEILYYKILETVMVQETRRLHGMDMSVLL 492
Query: 147 TNEKFHRCMLACSAELVSMARTRVSILFPLILERAGITAFDMCKVTESFIRHEDSLPREL 206
+ FH ++AC E+V A + FP I+E + F KV E IR E+ L R++
Sbjct: 493 EQDIFHHSLMACCLEIVLFAYSSPRT-FPWIIEVLNLRPFYFYKVIEVVIRSEEGLSRDM 551
Query: 207 MRHLNSLEETMLESMVWEKGSSLYNSLIASR---PDLQEEI 244
++HLNS+EE +LES+ W S+L+ +L AS P +E I
Sbjct: 552 VKHLNSIEEQILESLAWSHDSALWEALQASENRVPTCEEVI 592
Score = 148 (57.2 bits), Expect = 2.1e-25, Sum P(2) = 2.1e-25
Identities = 40/136 (29%), Positives = 69/136 (50%)
Query: 311 KVDSPVVDSHQ--VKLQPV-TPSSQTAFMSPVQSKTPKDGGIKMDAAVTFLFNKMTKLGA 367
KV+SPV + Q + P T ++ + P+ PK G ++ + K+ L +
Sbjct: 746 KVESPVSLTAQSLIGASPKQTHLTKAQEVHPIGISKPKRTG-----SLALFYRKVYHLAS 800
Query: 368 VRINSMAERLKLSQQIREKTYLLFRQILVEKTYLFFNRHIDLIILCCFCGVAKINKLKLK 427
VR+ + +L +S ++R K + F LV L +RH+D ++LC F +AK+ K +
Sbjct: 801 VRLRDLCLKLDVSNELRRKIWTCFEFTLVHCPDLMKDRHLDQLLLCAFYIMAKVTKEERT 860
Query: 428 FEEITDNYVKEPQCRS 443
F+EI +Y +PQ S
Sbjct: 861 FQEIMKSYRNQPQANS 876
Score = 39 (18.8 bits), Expect = 4.9e-14, Sum P(2) = 4.9e-14
Identities = 8/13 (61%), Positives = 8/13 (61%)
Query: 290 KRLCDENGSKLTK 302
KRLC EN L K
Sbjct: 1044 KRLCQENDDVLLK 1056
Score = 37 (18.1 bits), Expect = 7.9e-14, Sum P(2) = 7.9e-14
Identities = 14/59 (23%), Positives = 23/59 (38%)
Query: 315 PVVDSHQVKLQPVTPSSQTAFMSPVQSKTPKDGGIKMDAAVTFLFNKMTKLGAVRINSM 373
P+ +K QP +P + S S G+ +A+ + FN IN+M
Sbjct: 962 PLSPFPHIKQQPGSPRRISQQHSIYVSPHKNGSGLTPRSALLYKFNGSPSKSLKDINNM 1020
>UNIPROTKB|F1SEM0 [details] [associations]
symbol:RBL1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0043550 "regulation of lipid kinase activity"
evidence=IEA] [GO:0008134 "transcription factor binding"
evidence=IEA] [GO:0005667 "transcription factor complex"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0051726
"regulation of cell cycle" evidence=IEA] InterPro:IPR002719
InterPro:IPR002720 Pfam:PF01857 Pfam:PF01858 GO:GO:0005667
GO:GO:0000122 GO:GO:0051726 Gene3D:1.10.472.10 InterPro:IPR013763
SMART:SM00385 SUPFAM:SSF47954 GeneTree:ENSGT00530000063235
InterPro:IPR024599 Pfam:PF11934 OMA:RRDMQPL GO:GO:0043550
InterPro:IPR015030 Pfam:PF08934 EMBL:CU607009
Ensembl:ENSSSCT00000008022 Uniprot:F1SEM0
Length = 1069
Score = 223 (83.6 bits), Expect = 2.7e-25, Sum P(2) = 2.7e-25
Identities = 67/210 (31%), Positives = 105/210 (50%)
Query: 31 TPVRTAQNTASNWLKTVIAPLPSKPSAELEKFLSLGSVSIANEVESGANIVLEAIFPSIK 90
TPV +A + S L++++A L + PS +L N ES +E I +K
Sbjct: 387 TPVASATQSVSR-LQSIVAGLKNAPSEQL-----------INIFESCMRNPMENIMKIVK 434
Query: 91 -LGERLFNWSLLNVNLMDS--LWSGQERTEALK-LYYKVLESICASEAGKSSSRDLSGLL 146
+GE + + + R + + LYYK+LE+I E + D+S LL
Sbjct: 435 GIGEAFCQHYTQSTDEQPGSHIDFAVNRLKLAEILYYKILETIMVQETRRLHGMDMSVLL 494
Query: 147 TNEKFHRCMLACSAELVSMARTRVSILFPLILERAGITAFDMCKVTESFIRHEDSLPREL 206
+ FH ++AC E+V A + FP I+E + F KV E IR E+ L R++
Sbjct: 495 EQDIFHHSLMACCLEIVLFAYSSPRT-FPWIIEVLNLRPFYFYKVIEVVIRSEEGLSRDM 553
Query: 207 MRHLNSLEETMLESMVWEKGSSLYNSLIAS 236
++HLNS+EE +LES+ W S+L+ +L AS
Sbjct: 554 VKHLNSIEEQILESLAWSHDSALWEALQAS 583
Score = 147 (56.8 bits), Expect = 2.7e-25, Sum P(2) = 2.7e-25
Identities = 39/136 (28%), Positives = 69/136 (50%)
Query: 311 KVDSPVVDSHQ--VKLQPV-TPSSQTAFMSPVQSKTPKDGGIKMDAAVTFLFNKMTKLGA 367
KV+SP+ + Q + P T ++ + P+ PK G ++ + K+ L +
Sbjct: 747 KVESPISLTAQSLIGASPKQTHLTKAQEVHPIGISKPKRTG-----SLALFYRKVYHLAS 801
Query: 368 VRINSMAERLKLSQQIREKTYLLFRQILVEKTYLFFNRHIDLIILCCFCGVAKINKLKLK 427
VR+ + +L +S ++R K + F LV L +RH+D ++LC F +AK+ K +
Sbjct: 802 VRLRDLCLKLDVSNELRRKIWTCFEFTLVHCPDLMKDRHLDQLLLCAFYIMAKVTKEERT 861
Query: 428 FEEITDNYVKEPQCRS 443
F+EI +Y +PQ S
Sbjct: 862 FQEIMKSYRNQPQANS 877
Score = 37 (18.1 bits), Expect = 7.9e-14, Sum P(2) = 7.9e-14
Identities = 7/13 (53%), Positives = 8/13 (61%)
Query: 290 KRLCDENGSKLTK 302
KR+C EN L K
Sbjct: 1045 KRICQENDDVLLK 1057
>UNIPROTKB|F1MD46 [details] [associations]
symbol:RB1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0071930 "negative regulation of transcription involved
in G1/S phase of mitotic cell cycle" evidence=IEA] [GO:0071922
"regulation of cohesin localization to chromatin" evidence=IEA]
[GO:0071459 "protein localization to chromosome, centromeric
region" evidence=IEA] [GO:0051402 "neuron apoptotic process"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0051219
"phosphoprotein binding" evidence=IEA] [GO:0051146 "striated muscle
cell differentiation" evidence=IEA] [GO:0050680 "negative
regulation of epithelial cell proliferation" evidence=IEA]
[GO:0048667 "cell morphogenesis involved in neuron differentiation"
evidence=IEA] [GO:0048565 "digestive tract development"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0045879
"negative regulation of smoothened signaling pathway" evidence=IEA]
[GO:0045842 "positive regulation of mitotic metaphase/anaphase
transition" evidence=IEA] [GO:0045651 "positive regulation of
macrophage differentiation" evidence=IEA] [GO:0045445 "myoblast
differentiation" evidence=IEA] [GO:0043550 "regulation of lipid
kinase activity" evidence=IEA] [GO:0043353 "enucleate erythrocyte
differentiation" evidence=IEA] [GO:0042551 "neuron maturation"
evidence=IEA] [GO:0035189 "Rb-E2F complex" evidence=IEA]
[GO:0034088 "maintenance of mitotic sister chromatid cohesion"
evidence=IEA] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0031175 "neuron projection development"
evidence=IEA] [GO:0031134 "sister chromatid biorientation"
evidence=IEA] [GO:0019900 "kinase binding" evidence=IEA]
[GO:0016605 "PML body" evidence=IEA] [GO:0007265 "Ras protein
signal transduction" evidence=IEA] [GO:0007090 "regulation of S
phase of mitotic cell cycle" evidence=IEA] [GO:0007050 "cell cycle
arrest" evidence=IEA] [GO:0006469 "negative regulation of protein
kinase activity" evidence=IEA] [GO:0005819 "spindle" evidence=IEA]
[GO:0001102 "RNA polymerase II activating transcription factor
binding" evidence=IEA] [GO:0001047 "core promoter binding"
evidence=IEA] InterPro:IPR002719 InterPro:IPR002720 Pfam:PF01857
Pfam:PF01858 GO:GO:0007265 GO:GO:0051301 GO:GO:0005819
GO:GO:0006469 GO:GO:0016605 GO:GO:0045944 GO:GO:0051402
GO:GO:0007050 GO:GO:0001047 GO:GO:0051146 GO:GO:0031175
GO:GO:0048565 GO:GO:0071459 GO:GO:0050680 GO:GO:0045445
Gene3D:1.10.472.10 InterPro:IPR013763 SMART:SM00385 SUPFAM:SSF47954
GO:GO:0031134 GO:GO:0007090 GO:GO:0045651 GO:GO:0071922
GO:GO:0045842 GO:GO:0045879 GO:GO:0042551 GO:GO:0035189
GO:GO:0043353 GO:GO:0034088 GO:GO:0071930 GO:GO:0048667
GeneTree:ENSGT00530000063235 InterPro:IPR024599 Pfam:PF11934
GO:GO:0043550 InterPro:IPR015030 Pfam:PF08934 InterPro:IPR015652
PANTHER:PTHR13742:SF10 OMA:TNILQYA EMBL:DAAA02032883
EMBL:DAAA02032882 EMBL:DAAA02032884 EMBL:DAAA02032885
IPI:IPI00703019 UniGene:Bt.47780 Ensembl:ENSBTAT00000008728
Uniprot:F1MD46
Length = 928
Score = 231 (86.4 bits), Expect = 3.2e-25, Sum P(2) = 3.2e-25
Identities = 77/249 (30%), Positives = 122/249 (48%)
Query: 31 TPVRTAQNTASNWLKTVIAPLPSKPSAELEKFLSLGSVSIANEVESGANIVLEAIFPSIK 90
TPVRT NT L ++ +PS L + + +V N +S I +K
Sbjct: 373 TPVRTVMNTIQQ-LMMILNSASDQPSENLISYFNNCTV---NPKDS--------ILKRVK 420
Query: 91 -LGERLFNWSLLNVNLMDSLWSGQERTE-ALKLYYKVLESICASEAGKSSSRDLSGLLTN 148
+G+ +F + G +R + ++LYY+V+ES+ SE + S ++ S LL +
Sbjct: 421 DIGD-VFKEKFAKAVGQGCMEIGSQRYKLGVRLYYRVMESMLKSEEERLSIQNFSKLLND 479
Query: 149 EKFHRCMLACSAELV------SMAR---TRVSILFPLILERAGITAFDMCKVTESFIRHE 199
FH +LAC+ E+V SM++ T + FP IL + AFD KV ESFI+ E
Sbjct: 480 NIFHMSLLACALEVVMATYSRSMSQSLDTGTDLSFPWILNVFNLKAFDFYKVIESFIKAE 539
Query: 200 DSLPRELMRHLNSLEETMLESMVWEKGSSLYNSLIASRPDLQEEIKRLKLLAEPMPSLHE 259
+L RE+++HL E ++ES+ W S L++ LI D + + EP +L+
Sbjct: 540 ANLTREMIKHLERCEHRIMESLAWLSDSPLFD-LIKQAKDREGPVDHF----EPACTLNL 594
Query: 260 ISMNNHLAS 268
NNH A+
Sbjct: 595 PLQNNHTAA 603
Score = 136 (52.9 bits), Expect = 3.2e-25, Sum P(2) = 3.2e-25
Identities = 41/148 (27%), Positives = 70/148 (47%)
Query: 328 TPSSQTAFMSPVQSKTPKDGGIKMDAAVTFLFNKMTKLGAVRINSMAERLKLSQ--QIRE 385
TP+S+ S Q++ P +K +++ + K+ +L +R+N++ RL LS ++
Sbjct: 625 TPNSEAQATSAFQTQKP----LK-STSLSLFYKKVYRLAYLRLNTLCARL-LSDHPELEH 678
Query: 386 KTYLLFRQILVEKTYLFFNRHIDLIILCCFCGVAKINKLKLKFEEITDNYVKEPQCRSQD 445
+ LF+ L + L +RH+D I++C G+ K+ + LKF+ I Y P +
Sbjct: 679 IIWTLFQHTLQNEYELMRDRHLDQIMMCSMYGICKVKNIDLKFKIIVTAYKDLPHAVQET 738
Query: 446 FGFVFAGWLSKHKGKNRENYKSIDAFYN 473
F V E Y SI FYN
Sbjct: 739 FKRVLI---------REEEYDSIIVFYN 757
Score = 39 (18.8 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 18/70 (25%), Positives = 28/70 (40%)
Query: 28 MTP-TPVRTAQNTASNWLKTVIAPLPSKPSAELEKFLSLGSVSIAN-EVESGANIVLEAI 85
M P TP R A A+ + PLP P + E+ + +A E E A+
Sbjct: 1 MPPKTPRRAAAAAAAAAAEPPPPPLPPPPEEDPEQDSGSEDLPLARLEFEETEEPDFTAL 60
Query: 86 FPSIKLGERL 95
+KL + +
Sbjct: 61 CQKLKLPDHV 70
>UNIPROTKB|Q9BDQ3 [details] [associations]
symbol:RB1 "Retinoblastoma protein 1" species:9598 "Pan
troglodytes" [GO:0005634 "nucleus" evidence=ISS] [GO:0006469
"negative regulation of protein kinase activity" evidence=ISS]
[GO:0008134 "transcription factor binding" evidence=ISS]
[GO:0016605 "PML body" evidence=ISS] [GO:0019900 "kinase binding"
evidence=ISS] [GO:0043550 "regulation of lipid kinase activity"
evidence=ISS] [GO:0045445 "myoblast differentiation" evidence=ISS]
InterPro:IPR002719 InterPro:IPR002720 Pfam:PF01857 Pfam:PF01858
GO:GO:0006469 GO:GO:0016605 GO:GO:0019900 GO:GO:0051726
GO:GO:0008134 GO:GO:0045445 Gene3D:1.10.472.10 InterPro:IPR013763
SMART:SM00385 SUPFAM:SSF47954 eggNOG:NOG296920 InterPro:IPR024599
Pfam:PF11934 GO:GO:0043550 InterPro:IPR015030 Pfam:PF08934
HSSP:P06400 HOGENOM:HOG000136539 HOVERGEN:HBG008967
InterPro:IPR015652 PANTHER:PTHR13742:SF10 OrthoDB:EOG4TXBRB
EMBL:AH010623 ProteinModelPortal:Q9BDQ3 STRING:Q9BDQ3
InParanoid:Q9BDQ3 Uniprot:Q9BDQ3
Length = 882
Score = 221 (82.9 bits), Expect = 1.8e-24, Sum P(2) = 1.8e-24
Identities = 80/264 (30%), Positives = 121/264 (45%)
Query: 31 TPVRTAQNTASNWLKTVIAPLPSKPSAELEKFLSLGSVSIANEVESGANIVLEAIFPSIK 90
TPVRT NT L ++ +PS L + + +V N ES I +K
Sbjct: 327 TPVRTVMNTIQQ-LMMILNSASDQPSENLISYFNNCTV---NPKES--------ILKRVK 374
Query: 91 LGERLFNWSLLNVNLMDSLWSGQERTE-ALKLYYKVLESICASEAGKSSSRDLSGLLTNE 149
+F + G +R + ++LYY+V+ES+ SE + S ++ S LL +
Sbjct: 375 DIGYIFKEKFAKAVGQGCVEIGSQRYKLGVRLYYRVMESMLKSEEERLSIQNFSKLLNDN 434
Query: 150 KFHRCMLACSAELVSMARTR---------VSILFPLILERAGITAFDMCKVTESFIRHED 200
FH +LAC+ E+V +R + FP IL + AFD KV ESFI+ E
Sbjct: 435 IFHMSLLACALEVVMATYSRSTSQNLDSGTDLSFPWILNVLNLKAFDFYKVIESFIKAEG 494
Query: 201 SLPRELMRHLNSLEETMLESMVWEKGSSLYNSLIASRPDLQEEIKRLKLLAEPMPSLHEI 260
+L RE+++HL E ++ES+ W S L++ LI D + L+ A P L+
Sbjct: 495 NLTREMIKHLERCEHRIMESLAWLSDSPLFD-LIKQSKDREGPTDHLES-ACP---LNLP 549
Query: 261 SMNNHLASGVLAYQHNLHKHKPST 284
NNH A+ + K K ST
Sbjct: 550 LQNNHTAADMYLSPVRSPKKKGST 573
Score = 139 (54.0 bits), Expect = 1.8e-24, Sum P(2) = 1.8e-24
Identities = 43/148 (29%), Positives = 74/148 (50%)
Query: 328 TPSSQTAFMSPVQSKTPKDGGIKMDAAVTFLFNKMTKLGAVRINSMAERLKLSQ--QIRE 385
T +++T S Q++ P +K +++ + K+ +L +R+N++ ERL LS+ ++
Sbjct: 579 TANAETQATSAFQTQKP----LK-STSLSLFYKKVYRLAYLRLNTLCERL-LSEHPELEH 632
Query: 386 KTYLLFRQILVEKTYLFFNRHIDLIILCCFCGVAKINKLKLKFEEITDNYVKEPQCRSQD 445
+ LF+ L + L +RH+D I++C G+ K+ + LKF+ I Y P +
Sbjct: 633 IIWTLFQHTLQNEYELMRDRHLDQIMMCSMYGICKVKNIDLKFKIIVTAYKDLPHAVQET 692
Query: 446 FGFVFAGWLSKHKGKNRENYKSIDAFYN 473
F V L K E Y SI FYN
Sbjct: 693 FKRV----LIKE-----EEYDSIIVFYN 711
>UNIPROTKB|P06400 [details] [associations]
symbol:RB1 "Retinoblastoma-associated protein" species:9606
"Homo sapiens" [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0019048 "virus-host interaction" evidence=IEA]
[GO:0001102 "RNA polymerase II activating transcription factor
binding" evidence=IEA] [GO:0005819 "spindle" evidence=IEA]
[GO:0031175 "neuron projection development" evidence=IEA]
[GO:0042551 "neuron maturation" evidence=IEA] [GO:0043353
"enucleate erythrocyte differentiation" evidence=IEA] [GO:0045651
"positive regulation of macrophage differentiation" evidence=IEA]
[GO:0045879 "negative regulation of smoothened signaling pathway"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0048565
"digestive tract development" evidence=IEA] [GO:0048667 "cell
morphogenesis involved in neuron differentiation" evidence=IEA]
[GO:0050680 "negative regulation of epithelial cell proliferation"
evidence=IEA] [GO:0051146 "striated muscle cell differentiation"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0051402
"neuron apoptotic process" evidence=IEA] [GO:0071930 "negative
regulation of transcription involved in G1/S phase of mitotic cell
cycle" evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0016605 "PML body" evidence=IDA] [GO:0043550 "regulation of
lipid kinase activity" evidence=IDA] [GO:0019900 "kinase binding"
evidence=IDA] [GO:0003713 "transcription coactivator activity"
evidence=NAS] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=NAS] [GO:0050681 "androgen receptor
binding" evidence=NAS] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IDA;TAS] [GO:0045445
"myoblast differentiation" evidence=IMP] [GO:0006469 "negative
regulation of protein kinase activity" evidence=IPI] [GO:0030521
"androgen receptor signaling pathway" evidence=NAS] [GO:0031625
"ubiquitin protein ligase binding" evidence=IPI] [GO:0008134
"transcription factor binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0051219 "phosphoprotein binding" evidence=IPI]
[GO:0001047 "core promoter binding" evidence=IDA] [GO:0000075 "cell
cycle checkpoint" evidence=TAS] [GO:0003677 "DNA binding"
evidence=TAS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=TAS] [GO:0000785
"chromatin" evidence=TAS] [GO:0000080 "G1 phase of mitotic cell
cycle" evidence=TAS] [GO:0000082 "G1/S transition of mitotic cell
cycle" evidence=TAS] [GO:0000084 "S phase of mitotic cell cycle"
evidence=TAS] [GO:0000278 "mitotic cell cycle" evidence=TAS]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0007265 "Ras protein
signal transduction" evidence=IEP] [GO:0007346 "regulation of
mitotic cell cycle" evidence=IMP] [GO:0031134 "sister chromatid
biorientation" evidence=IMP] [GO:0090230 "regulation of centromere
complex assembly" evidence=TAS] [GO:0034088 "maintenance of mitotic
sister chromatid cohesion" evidence=IMP] [GO:0045842 "positive
regulation of mitotic metaphase/anaphase transition" evidence=IMP]
[GO:0071922 "regulation of cohesin localization to chromatin"
evidence=IMP] [GO:0071459 "protein localization to chromosome,
centromeric region" evidence=IMP] [GO:0016514 "SWI/SNF complex"
evidence=TAS] [GO:0006338 "chromatin remodeling" evidence=TAS]
[GO:0000083 "regulation of transcription involved in G1/S phase of
mitotic cell cycle" evidence=TAS] [GO:0045749 "negative regulation
of S phase of mitotic cell cycle" evidence=TAS] [GO:0007050 "cell
cycle arrest" evidence=TAS] [GO:0035189 "Rb-E2F complex"
evidence=TAS] [GO:0043433 "negative regulation of sequence-specific
DNA binding transcription factor activity" evidence=TAS]
[GO:0007093 "mitotic cell cycle checkpoint" evidence=TAS]
InterPro:IPR002719 InterPro:IPR002720 Pfam:PF01857 Pfam:PF01858
GO:GO:0045892 GO:GO:0007265 Reactome:REACT_115566 GO:GO:0019048
GO:GO:0045893 GO:GO:0030521 GO:GO:0051301 GO:GO:0030308
GO:GO:0005819 GO:GO:0006469 GO:GO:0016605 EMBL:CH471075
GO:GO:0045944 GO:GO:0051402 GO:GO:0000785 GO:GO:0003700
GO:GO:0007050 GO:GO:0006351 GO:GO:0006338 GO:GO:0019900
GO:GO:0003713 GO:GO:0016514 GO:GO:0001047 GO:GO:0043433
GO:GO:0051146 GO:GO:0031175 GO:GO:0048565 GO:GO:0071459
GO:GO:0000084 GO:GO:0050680 GO:GO:0050681 GO:GO:0045749
GO:GO:0045445 Gene3D:1.10.472.10 InterPro:IPR013763 SMART:SM00385
SUPFAM:SSF47954 GO:GO:0031134 GO:GO:0000080
Pathway_Interaction_DB:foxm1pathway GO:GO:0000083 GO:GO:0045651
DrugBank:DB00047 DrugBank:DB00046 DrugBank:DB00030 DrugBank:DB00071
GO:GO:0071922 Reactome:REACT_383 PDB:1H25 PDBsum:1H25 GO:GO:0045842
GO:GO:0045879 GO:GO:0042551 GO:GO:0031575 GO:GO:0035189
GO:GO:0043353 MIM:259500 GO:GO:0034088 PDB:2R7G PDBsum:2R7G
GO:GO:0071930 PDB:1O9K PDB:2AZE PDBsum:1O9K PDBsum:2AZE PDB:1N4M
PDBsum:1N4M GO:GO:0048667 MIM:109800 EMBL:L11910 EMBL:AF551763
EMBL:AL392048 PDB:1GH6 PDBsum:1GH6 PDB:3N5U PDBsum:3N5U
eggNOG:NOG296920 InterPro:IPR024599 Pfam:PF11934 GO:GO:0043550
InterPro:IPR015030 Pfam:PF08934 CTD:5925 HOVERGEN:HBG008967
KO:K06618 InterPro:IPR015652 PANTHER:PTHR13742:SF10 EMBL:M15400
EMBL:M28419 EMBL:M33647 EMBL:L41870 EMBL:M27866 EMBL:M27845
EMBL:M27846 EMBL:M27847 EMBL:M27849 EMBL:M27850 EMBL:M27851
EMBL:L35146 EMBL:M27852 EMBL:M27853 EMBL:M27854 EMBL:M27855
EMBL:M27856 EMBL:M27857 EMBL:M27858 EMBL:M27859 EMBL:M27860
EMBL:L35147 EMBL:M27862 EMBL:M27863 EMBL:M27864 EMBL:M27865
EMBL:L41889 EMBL:L41890 EMBL:L41891 EMBL:L41893 EMBL:L41894
EMBL:L41895 EMBL:L41896 EMBL:L41897 EMBL:L41898 EMBL:L41899
EMBL:L41997 EMBL:X16439 EMBL:AK291258 EMBL:AL136960 EMBL:BC039060
EMBL:BC040540 IPI:IPI00302829 PIR:JS0276 RefSeq:NP_000312.2
UniGene:Hs.408528 PDB:1AD6 PDB:1GUX PDB:1PJM PDB:2QDJ PDB:3POM
PDB:4ELJ PDB:4ELL PDBsum:1AD6 PDBsum:1GUX PDBsum:1PJM PDBsum:2QDJ
PDBsum:3POM PDBsum:4ELJ PDBsum:4ELL ProteinModelPortal:P06400
SMR:P06400 DIP:DIP-582N IntAct:P06400 MINT:MINT-98847 STRING:P06400
PhosphoSite:P06400 DMDM:132164 PaxDb:P06400 PeptideAtlas:P06400
PRIDE:P06400 DNASU:5925 Ensembl:ENST00000267163 GeneID:5925
KEGG:hsa:5925 UCSC:uc001vcb.3 GeneCards:GC13P048877 HGNC:HGNC:9884
HPA:CAB000095 HPA:CAB016687 MIM:180200 MIM:614041
neXtProt:NX_P06400 Orphanet:790 PharmGKB:PA295 InParanoid:P06400
OMA:TNILQYA OrthoDB:EOG4TXBRB PhylomeDB:P06400 BindingDB:P06400
ChEMBL:CHEMBL5288 ChiTaRS:RB1 EvolutionaryTrace:P06400
GenomeRNAi:5925 NextBio:23076 PMAP-CutDB:P06400 ArrayExpress:P06400
Bgee:P06400 CleanEx:HS_RB1 Genevestigator:P06400
GermOnline:ENSG00000139687 GO:GO:0090230 Uniprot:P06400
Length = 928
Score = 221 (82.9 bits), Expect = 2.1e-24, Sum P(2) = 2.1e-24
Identities = 80/264 (30%), Positives = 121/264 (45%)
Query: 31 TPVRTAQNTASNWLKTVIAPLPSKPSAELEKFLSLGSVSIANEVESGANIVLEAIFPSIK 90
TPVRT NT L ++ +PS L + + +V N ES I +K
Sbjct: 373 TPVRTVMNTIQQ-LMMILNSASDQPSENLISYFNNCTV---NPKES--------ILKRVK 420
Query: 91 LGERLFNWSLLNVNLMDSLWSGQERTE-ALKLYYKVLESICASEAGKSSSRDLSGLLTNE 149
+F + G +R + ++LYY+V+ES+ SE + S ++ S LL +
Sbjct: 421 DIGYIFKEKFAKAVGQGCVEIGSQRYKLGVRLYYRVMESMLKSEEERLSIQNFSKLLNDN 480
Query: 150 KFHRCMLACSAELVSMARTR---------VSILFPLILERAGITAFDMCKVTESFIRHED 200
FH +LAC+ E+V +R + FP IL + AFD KV ESFI+ E
Sbjct: 481 IFHMSLLACALEVVMATYSRSTSQNLDSGTDLSFPWILNVLNLKAFDFYKVIESFIKAEG 540
Query: 201 SLPRELMRHLNSLEETMLESMVWEKGSSLYNSLIASRPDLQEEIKRLKLLAEPMPSLHEI 260
+L RE+++HL E ++ES+ W S L++ LI D + L+ A P L+
Sbjct: 541 NLTREMIKHLERCEHRIMESLAWLSDSPLFD-LIKQSKDREGPTDHLES-ACP---LNLP 595
Query: 261 SMNNHLASGVLAYQHNLHKHKPST 284
NNH A+ + K K ST
Sbjct: 596 LQNNHTAADMYLSPVRSPKKKGST 619
Score = 139 (54.0 bits), Expect = 2.1e-24, Sum P(2) = 2.1e-24
Identities = 43/148 (29%), Positives = 74/148 (50%)
Query: 328 TPSSQTAFMSPVQSKTPKDGGIKMDAAVTFLFNKMTKLGAVRINSMAERLKLSQ--QIRE 385
T +++T S Q++ P +K +++ + K+ +L +R+N++ ERL LS+ ++
Sbjct: 625 TANAETQATSAFQTQKP----LK-STSLSLFYKKVYRLAYLRLNTLCERL-LSEHPELEH 678
Query: 386 KTYLLFRQILVEKTYLFFNRHIDLIILCCFCGVAKINKLKLKFEEITDNYVKEPQCRSQD 445
+ LF+ L + L +RH+D I++C G+ K+ + LKF+ I Y P +
Sbjct: 679 IIWTLFQHTLQNEYELMRDRHLDQIMMCSMYGICKVKNIDLKFKIIVTAYKDLPHAVQET 738
Query: 446 FGFVFAGWLSKHKGKNRENYKSIDAFYN 473
F V L K E Y SI FYN
Sbjct: 739 FKRV----LIKE-----EEYDSIIVFYN 757
>ZFIN|ZDB-GENE-030131-8179 [details] [associations]
symbol:rbl1 "retinoblastoma-like 1 (p107)"
species:7955 "Danio rerio" [GO:0005634 "nucleus" evidence=IEA]
[GO:0051726 "regulation of cell cycle" evidence=IEA]
InterPro:IPR002719 InterPro:IPR002720 Pfam:PF01857 Pfam:PF01858
ZFIN:ZDB-GENE-030131-8179 GO:GO:0005634 GO:GO:0051726
Gene3D:1.10.472.10 InterPro:IPR013763 SMART:SM00385 SUPFAM:SSF47954
GeneTree:ENSGT00530000063235 InterPro:IPR024599 Pfam:PF11934
OMA:RRDMQPL EMBL:BX936390 IPI:IPI00770273
Ensembl:ENSDART00000073865 ArrayExpress:F1QY31 Bgee:F1QY31
Uniprot:F1QY31
Length = 1058
Score = 227 (85.0 bits), Expect = 4.4e-24, Sum P(2) = 4.4e-24
Identities = 76/233 (32%), Positives = 117/233 (50%)
Query: 6 EATNSTSPPCSPASQSNGSMAKMTPTPVRTAQNTASNWLKTVIAPLPSKPS-AELEKFLS 64
E T S +P + ++ TPV +A + S L+++++ L + PS A L+ F+S
Sbjct: 361 EKTRSLAPSTPLTGRRYLKEKEVLVTPVSSATQSVSR-LQSMVSGLRNAPSDALLQIFIS 419
Query: 65 LGSVSIANEVESGANIVLEAIFPSIKLGERLFNWSLLNV--NLMDSLWSGQERTEALK-- 120
N ES N V LGE+ F + N +L + E+ L
Sbjct: 420 CSR----NPTESILNRVKT-------LGEK-FKQAYTNPTDDLPGAHMDFAEKRLKLAEI 467
Query: 121 LYYKVLESICASEAGKSSSRDLSGLLTNEKFHRCMLACSAELVSMARTRVSILFPLILER 180
LY+K+LE++ E + +D + LL E H +LAC E+V + + FP ILE
Sbjct: 468 LYFKILENVMTQEMKRLQGKDWAVLLEQEVLHCSLLACCLEVVLFSYSSQRT-FPWILEI 526
Query: 181 AGITAFDMCKVTESFIRHEDSLPRELMRHLNSLEETMLESMVWEKGSSLYNSL 233
I F KV E FIR E+ L R++++HLNS+EE +LES W + S+L+N+L
Sbjct: 527 FQIPPFYFYKVIEVFIRSEEGLSRDMVKHLNSIEEQVLESRAWTRDSALWNAL 579
Score = 131 (51.2 bits), Expect = 4.4e-24, Sum P(2) = 4.4e-24
Identities = 31/116 (26%), Positives = 58/116 (50%)
Query: 331 SQTAFMSPV---QSKTPKDGGIKMDAAVTFLFNKMTKLGAVRINSMAERLKLSQQIREKT 387
S+ A +P S+ P + ++ F K+ L +VR+ + +L +S ++R K
Sbjct: 745 SRPALAAPAISSDSQPPPANKPRRTGSLALFFRKVYHLASVRLRDLCLKLDISSELRGKI 804
Query: 388 YLLFRQILVEKTYLFFNRHIDLIILCCFCGVAKINKLKLKFEEITDNYVKEPQCRS 443
+ F L+ T L +RH+D ++LC +++I K + F++I Y +PQ S
Sbjct: 805 WTCFEHSLLHCTDLMKDRHLDQLLLCAVYIISRITKEEHTFQDIMKCYRTQPQANS 860
>UNIPROTKB|J9NU49 [details] [associations]
symbol:RB1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0051726 "regulation of cell cycle"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR002719 InterPro:IPR002720 Pfam:PF01857 Pfam:PF01858
GO:GO:0005634 GO:GO:0051726 Gene3D:1.10.472.10 InterPro:IPR013763
SMART:SM00385 SUPFAM:SSF47954 GeneTree:ENSGT00530000063235
InterPro:IPR024599 Pfam:PF11934 InterPro:IPR015030 Pfam:PF08934
InterPro:IPR015652 PANTHER:PTHR13742:SF10 EMBL:AAEX03013115
EMBL:AAEX03013116 EMBL:AAEX03013117 EMBL:AAEX03013118
Ensembl:ENSCAFT00000045816 Uniprot:J9NU49
Length = 920
Score = 227 (85.0 bits), Expect = 9.8e-24, Sum P(2) = 9.8e-24
Identities = 84/292 (28%), Positives = 134/292 (45%)
Query: 5 VEATNSTSPPCSPA-SQSNGSMAKMTP-TPVRTAQNTASNWLKTVIAPLPSKPSAELEKF 62
++ T+S +P S S+ + + P TPVRT NT L ++ +PS L +
Sbjct: 337 IDPTDSFEMQRTPQKSNSDEEVNVILPQTPVRTVMNTIQQ-LMMILNSASDQPSENLISY 395
Query: 63 LSLGSVSIANEVESGANIVLEAIFPSIKLGERLFNWSLLNVNLMDSLWSGQERTE-ALKL 121
+ +V N ES I +K +F + G +R + ++L
Sbjct: 396 FNNCTV---NPKES--------ILKRVKDVGYIFKEKFAKAVGQGCMEIGSQRYKLGVRL 444
Query: 122 YYKVLESICASEAGKSSSRDLSGLLTNEKFHRCMLACSAELVSMARTR---------VSI 172
YY+V+ES+ SE + S ++ S LL ++ FH +LAC+ E+V +R +
Sbjct: 445 YYRVMESMLKSEEERLSIQNFSKLLNDDIFHMSLLACALEVVMATYSRSTSQNLDTGTDL 504
Query: 173 LFPLILERAGITAFDMCKVTESFIRHEDSLPRELMRHLNSLEETMLESMVWEKGSSLYNS 232
FP IL + AFD KV ESFI+ E +L RE+++HL E ++ES+ W S L++
Sbjct: 505 SFPWILNVLNLKAFDFYKVIESFIKAEANLTREMIKHLERCEHRIMESLAWLSDSPLFD- 563
Query: 233 LIASRPDLQEEIKRLKLLAEPMPSLHEISMNNHLASGVLAYQHNLHKHKPST 284
LI D + L E +L+ +NH A+ + K K ST
Sbjct: 564 LIKQAKDREGPADHL----ESACTLNLPLQSNHTAADMYLSPVRSPKKKGST 611
Score = 126 (49.4 bits), Expect = 9.8e-24, Sum P(2) = 9.8e-24
Identities = 42/164 (25%), Positives = 75/164 (45%)
Query: 312 VDSPVVDSHQVKLQPVTPSSQTAFMSPVQSKTPKDGGIKMDAAVTFLFNKMTKLGAVRIN 371
V SP +++ T +++ S Q++ P +K +++ + K+ +L +R+N
Sbjct: 602 VRSPKKKGSTIRVNS-TVNTEAQATSAFQTQKP----LK-STSLSLFYKKVYRLAYLRLN 655
Query: 372 SMAERLKLSQ--QIREKTYLLFRQILVEKTYLFFNRHIDLIILCCFCGVAKINKLKLKFE 429
++ RL LS ++ + LF+ L + L +RH+D I++C G+ K+ + LKF+
Sbjct: 656 TLCARL-LSDHPELEHIIWTLFQHTLQNEYELMRDRHLDQIMMCSMYGICKVKNIDLKFK 714
Query: 430 EITDNYVKEPQCRSQDFGFVFAGWLSKHKGKNRENYKSIDAFYN 473
I Y P + F V E Y SI FYN
Sbjct: 715 IIVTAYKDLPHAVQETFKRVLI---------REEEYDSIIVFYN 749
Score = 38 (18.4 bits), Expect = 1.5e-14, Sum P(2) = 1.5e-14
Identities = 10/29 (34%), Positives = 18/29 (62%)
Query: 330 SSQTA---FMSPVQSKTPKDGGIKMDAAV 355
S+ TA ++SPV+S K I++++ V
Sbjct: 590 SNHTAADMYLSPVRSPKKKGSTIRVNSTV 618
>RGD|3540 [details] [associations]
symbol:Rb1 "retinoblastoma 1" species:10116 "Rattus norvegicus"
[GO:0000082 "G1/S transition of mitotic cell cycle" evidence=ISO]
[GO:0000122 "negative regulation of transcription from RNA polymerase
II promoter" evidence=ISO] [GO:0001047 "core promoter binding"
evidence=IEA;ISO] [GO:0001102 "RNA polymerase II activating
transcription factor binding" evidence=IEA;ISO] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=ISO;ISS;IDA]
[GO:0005667 "transcription factor complex" evidence=ISO] [GO:0005819
"spindle" evidence=IEA;ISO] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006469 "negative regulation of
protein kinase activity" evidence=ISO;ISS] [GO:0007050 "cell cycle
arrest" evidence=IEA;ISO] [GO:0007090 "regulation of S phase of
mitotic cell cycle" evidence=IEA;ISO] [GO:0007265 "Ras protein signal
transduction" evidence=IEA;ISO] [GO:0007346 "regulation of mitotic
cell cycle" evidence=ISO] [GO:0008134 "transcription factor binding"
evidence=ISO;ISS] [GO:0008285 "negative regulation of cell
proliferation" evidence=ISO] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0016605 "PML body" evidence=ISO;ISS] [GO:0019899
"enzyme binding" evidence=ISO] [GO:0019900 "kinase binding"
evidence=ISO;ISS] [GO:0030182 "neuron differentiation" evidence=ISO]
[GO:0031134 "sister chromatid biorientation" evidence=IEA;ISO]
[GO:0031175 "neuron projection development" evidence=IEA;ISO]
[GO:0031625 "ubiquitin protein ligase binding" evidence=IEA;ISO]
[GO:0034088 "maintenance of mitotic sister chromatid cohesion"
evidence=IEA;ISO] [GO:0035189 "Rb-E2F complex" evidence=IEA;ISO]
[GO:0035914 "skeletal muscle cell differentiation" evidence=ISO]
[GO:0042551 "neuron maturation" evidence=IEA;ISO] [GO:0043353
"enucleate erythrocyte differentiation" evidence=IEA;ISO] [GO:0043550
"regulation of lipid kinase activity" evidence=ISO;ISS] [GO:0045445
"myoblast differentiation" evidence=ISO;ISS] [GO:0045651 "positive
regulation of macrophage differentiation" evidence=IEA;ISO]
[GO:0045786 "negative regulation of cell cycle" evidence=ISO]
[GO:0045842 "positive regulation of mitotic metaphase/anaphase
transition" evidence=IEA;ISO] [GO:0045879 "negative regulation of
smoothened signaling pathway" evidence=IEA;ISO] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=ISO] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IEA;ISO] [GO:0048565 "digestive tract development"
evidence=IEA;ISO] [GO:0048667 "cell morphogenesis involved in neuron
differentiation" evidence=IEA;ISO] [GO:0050680 "negative regulation
of epithelial cell proliferation" evidence=IEA;ISO] [GO:0051146
"striated muscle cell differentiation" evidence=IEA;ISO] [GO:0051219
"phosphoprotein binding" evidence=IEA;ISO] [GO:0051301 "cell
division" evidence=IEA;ISO] [GO:0051402 "neuron apoptotic process"
evidence=IEA;ISO] [GO:0051726 "regulation of cell cycle"
evidence=ISO] [GO:0071459 "protein localization to chromosome,
centromeric region" evidence=IEA;ISO] [GO:0071922 "regulation of
cohesin localization to chromatin" evidence=IEA;ISO] [GO:0071930
"negative regulation of transcription involved in G1/S phase of
mitotic cell cycle" evidence=IEA;ISO] InterPro:IPR002719
InterPro:IPR002720 Pfam:PF01857 Pfam:PF01858 RGD:3540 GO:GO:0007265
GO:GO:0051301 GO:GO:0005819 GO:GO:0006469 GO:GO:0016605 GO:GO:0045944
GO:GO:0051402 GO:GO:0007050 GO:GO:0006351 GO:GO:0016568 GO:GO:0019900
GO:GO:0001047 GO:GO:0008134 GO:GO:0051146 GO:GO:0031175 GO:GO:0048565
GO:GO:0071459 GO:GO:0050680 GO:GO:0045445 Gene3D:1.10.472.10
InterPro:IPR013763 SMART:SM00385 SUPFAM:SSF47954 GO:GO:0031134
GO:GO:0007090 GO:GO:0045651 GO:GO:0071922 GO:GO:0045842 GO:GO:0045879
GO:GO:0042551 GO:GO:0035189 GO:GO:0043353 GO:GO:0034088 GO:GO:0071930
GO:GO:0048667 eggNOG:NOG296920 GeneTree:ENSGT00530000063235
InterPro:IPR024599 Pfam:PF11934 GO:GO:0043550 InterPro:IPR015030
Pfam:PF08934 CTD:5925 HOGENOM:HOG000136539 HOVERGEN:HBG008967
KO:K06618 InterPro:IPR015652 PANTHER:PTHR13742:SF10 OMA:TNILQYA
OrthoDB:EOG4TXBRB EMBL:D25233 EMBL:L07126 IPI:IPI00192561 PIR:S35544
RefSeq:NP_058741.1 UniGene:Rn.55115 IntAct:P33568 STRING:P33568
PhosphoSite:P33568 PRIDE:P33568 Ensembl:ENSRNOT00000021752
GeneID:24708 KEGG:rno:24708 UCSC:RGD:3540 InParanoid:P33568
NextBio:604187 Genevestigator:P33568 GermOnline:ENSRNOG00000016029
Uniprot:P33568
Length = 920
Score = 227 (85.0 bits), Expect = 3.3e-23, Sum P(2) = 3.3e-23
Identities = 80/266 (30%), Positives = 124/266 (46%)
Query: 8 TNSTSPPCSPASQSNGSMAKMTP-TPVRTAQNTASNWLKTVIAPLPSKPSAELEKFLSLG 66
T T +P ++N +TP TPVRT NT L ++ +PS L + S
Sbjct: 346 TERTPRKSNPDEEAN----MVTPHTPVRTVMNTIQQ-LMVILNSASDQPSENLISYFSNC 400
Query: 67 SVSIANEVESGANIVLEAIFPSIKLGERLFNWSLLNVNLMDSLWSGQERTE-ALKLYYKV 125
+V N E+ I +K +F + + G +R + ++LYY+V
Sbjct: 401 TV---NPKEN--------ILKRVKDVGHIFKEKFASAVGQGCIDIGAQRYKLGVRLYYRV 449
Query: 126 LESICASEAGKSSSRDLSGLLTNEKFHRCMLACSAELVSMARTR---------VSILFPL 176
+ES+ SE + S ++ S LL + FH +LAC+ E+V +R + FP
Sbjct: 450 MESMLKSEEERLSIQNFSKLLNDNIFHMSLLACALEVVMATYSRSMLQNLDSGTDLSFPW 509
Query: 177 ILERAGITAFDMCKVTESFIRHEDSLPRELMRHLNSLEETMLESMVWEKGSSLYNSLIAS 236
IL + AFD KV ESFI+ E +L RE+++HL E ++ES+ W S L++ + S
Sbjct: 510 ILNVLNLKAFDFYKVIESFIKVEANLTREMIKHLERCEHRIMESLAWLSDSPLFDLIKQS 569
Query: 237 R----PDLQEEIKRLKLLAEPMPSLH 258
+ PD E L L P+ S H
Sbjct: 570 KDGEGPDHLESACSLSL---PLQSNH 592
Score = 121 (47.7 bits), Expect = 3.3e-23, Sum P(2) = 3.3e-23
Identities = 33/122 (27%), Positives = 58/122 (47%)
Query: 354 AVTFLFNKMTKLGAVRINSMAERLKLSQ--QIREKTYLLFRQILVEKTYLFFNRHIDLII 411
+++ + K+ +L +R+N++ RL LS ++ + LF+ L + L +RH+D I+
Sbjct: 638 SLSLFYKKVYRLAYLRLNTLCARL-LSDHPELEHIIWTLFQHTLENEYELMKDRHLDQIM 696
Query: 412 LCCFCGVAKINKLKLKFEEITDNYVKEPQCRSQDFGFVFAGWLSKHKGKNRENYKSIDAF 471
+C G+ K+ + LKF+ I Y P + F V E + SI F
Sbjct: 697 MCSMYGICKVKNIDLKFKIIVTAYKDLPHAAQETFKRVLI---------REEEFDSIIVF 747
Query: 472 YN 473
YN
Sbjct: 748 YN 749
>UNIPROTKB|E1BZL8 [details] [associations]
symbol:RB1 "Retinoblastoma-associated protein" species:9031
"Gallus gallus" [GO:0005634 "nucleus" evidence=IEA] [GO:0051726
"regulation of cell cycle" evidence=IEA] InterPro:IPR002719
InterPro:IPR002720 Pfam:PF01857 Pfam:PF01858 GO:GO:0005634
GO:GO:0051726 Gene3D:1.10.472.10 InterPro:IPR013763 SMART:SM00385
SUPFAM:SSF47954 GeneTree:ENSGT00530000063235 InterPro:IPR024599
Pfam:PF11934 InterPro:IPR015030 Pfam:PF08934 InterPro:IPR015652
PANTHER:PTHR13742:SF10 EMBL:AADN02005407 EMBL:AADN02005408
EMBL:AADN02005409 IPI:IPI00682055 Ensembl:ENSGALT00000030147
ArrayExpress:E1BZL8 Uniprot:E1BZL8
Length = 902
Score = 219 (82.2 bits), Expect = 4.6e-23, Sum P(2) = 4.6e-23
Identities = 75/250 (30%), Positives = 120/250 (48%)
Query: 31 TPVRTAQNTASNWLKTVIAPLPSKPSAELEKFLSLGSVSIANEVESGANIVLEAIFPSIK 90
TPVR A NT L ++ KPS L + + +V N +S +L+ +
Sbjct: 356 TPVRAAMNTIQQ-LMMILNSATDKPSDTLIAYFNNCTV---NPEDS----ILKRVE---S 404
Query: 91 LGERLFNWSLLNVNLMDSLWSGQERTE-ALKLYYKVLESICASEAGKSSSRDLSGLLTNE 149
LG +F G +R + ++LYY+V+ES+ SE + S + S LL +
Sbjct: 405 LGH-IFKKKFAEAVGQGCAEIGSQRYQLGVRLYYRVMESMLKSEEERLSVHNFSKLLNDN 463
Query: 150 KFHRCMLACSAELV--SMART---------RVSILFPLILERAGITAFDMCKVTESFIRH 198
FH +LAC+ E+V + RT + FP IL + AFD KV ESFI+
Sbjct: 464 IFHTSLLACALEIVMATYGRTASQSDGTSAETDLSFPWILNVFDLKAFDFYKVIESFIKV 523
Query: 199 EDSLPRELMRHLNSLEETMLESMVWEKGSSLYNSLIASRPDLQEEIKRLKLLAEPMPSLH 258
E SL R++++HL E ++ES+ W+ S L++ LI + + + + EP +L+
Sbjct: 524 EPSLTRDMIKHLERCEHRIMESLAWQSDSPLFD-LIKQSKEREGQTDQ----PEPTSTLN 578
Query: 259 EISMNNHLAS 268
+NH A+
Sbjct: 579 LPLQHNHTAA 588
Score = 128 (50.1 bits), Expect = 4.6e-23, Sum P(2) = 4.6e-23
Identities = 45/174 (25%), Positives = 80/174 (45%)
Query: 302 KHNSYATAMKVDSPVVDSHQVKLQPVTPSSQTAFMSPVQSKTPKDGGIKMDAAVTFLFNK 361
+HN A + + SPV S + K P S T+ S T + + +++ + K
Sbjct: 582 QHNHTAADLYL-SPV-RSPKKKASG-HPQSGTSNPDAQPSATSQTQKPQKSTSLSLFYKK 638
Query: 362 MTKLGAVRINSMAERLKLSQQ--IREKTYLLFRQILVEKTYLFFNRHIDLIILCCFCGVA 419
+ +L +R++++ RL LS+ + + LF+ L ++ L +RH+D I++C G+
Sbjct: 639 VFRLAYLRLHTLFFRL-LSEHPDLEPLIWTLFQHTLQNESELMRDRHLDQIMMCSMYGIC 697
Query: 420 KINKLKLKFEEITDNYVKEPQCRSQDFGFVFAGWLSKHKGKNRENYKSIDAFYN 473
K+ + L+F+ I Y + P + F V E Y SI FYN
Sbjct: 698 KVKNVDLRFKTIVSAYKELPNTNQETFKRVLI---------REEQYDSIIVFYN 742
>UNIPROTKB|E1C0H8 [details] [associations]
symbol:RB1 "Retinoblastoma-associated protein" species:9031
"Gallus gallus" [GO:0005634 "nucleus" evidence=IEA] [GO:0051726
"regulation of cell cycle" evidence=IEA] InterPro:IPR002719
InterPro:IPR002720 Pfam:PF01857 Pfam:PF01858 GO:GO:0005634
GO:GO:0051726 Gene3D:1.10.472.10 InterPro:IPR013763 SMART:SM00385
SUPFAM:SSF47954 GeneTree:ENSGT00530000063235 InterPro:IPR024599
Pfam:PF11934 InterPro:IPR015030 Pfam:PF08934 InterPro:IPR015652
PANTHER:PTHR13742:SF10 EMBL:AADN02005407 EMBL:AADN02005408
EMBL:AADN02005409 IPI:IPI00821844 Ensembl:ENSGALT00000036485
ArrayExpress:E1C0H8 Uniprot:E1C0H8
Length = 908
Score = 219 (82.2 bits), Expect = 4.7e-23, Sum P(2) = 4.7e-23
Identities = 75/250 (30%), Positives = 120/250 (48%)
Query: 31 TPVRTAQNTASNWLKTVIAPLPSKPSAELEKFLSLGSVSIANEVESGANIVLEAIFPSIK 90
TPVR A NT L ++ KPS L + + +V N +S +L+ +
Sbjct: 362 TPVRAAMNTIQQ-LMMILNSATDKPSDTLIAYFNNCTV---NPEDS----ILKRVE---S 410
Query: 91 LGERLFNWSLLNVNLMDSLWSGQERTE-ALKLYYKVLESICASEAGKSSSRDLSGLLTNE 149
LG +F G +R + ++LYY+V+ES+ SE + S + S LL +
Sbjct: 411 LGH-IFKKKFAEAVGQGCAEIGSQRYQLGVRLYYRVMESMLKSEEERLSVHNFSKLLNDN 469
Query: 150 KFHRCMLACSAELV--SMART---------RVSILFPLILERAGITAFDMCKVTESFIRH 198
FH +LAC+ E+V + RT + FP IL + AFD KV ESFI+
Sbjct: 470 IFHTSLLACALEIVMATYGRTASQSDGTSAETDLSFPWILNVFDLKAFDFYKVIESFIKV 529
Query: 199 EDSLPRELMRHLNSLEETMLESMVWEKGSSLYNSLIASRPDLQEEIKRLKLLAEPMPSLH 258
E SL R++++HL E ++ES+ W+ S L++ LI + + + + EP +L+
Sbjct: 530 EPSLTRDMIKHLERCEHRIMESLAWQSDSPLFD-LIKQSKEREGQTDQ----PEPTSTLN 584
Query: 259 EISMNNHLAS 268
+NH A+
Sbjct: 585 LPLQHNHTAA 594
Score = 128 (50.1 bits), Expect = 4.7e-23, Sum P(2) = 4.7e-23
Identities = 45/174 (25%), Positives = 80/174 (45%)
Query: 302 KHNSYATAMKVDSPVVDSHQVKLQPVTPSSQTAFMSPVQSKTPKDGGIKMDAAVTFLFNK 361
+HN A + + SPV S + K P S T+ S T + + +++ + K
Sbjct: 588 QHNHTAADLYL-SPV-RSPKKKASG-HPQSGTSNPDAQPSATSQTQKPQKSTSLSLFYKK 644
Query: 362 MTKLGAVRINSMAERLKLSQQ--IREKTYLLFRQILVEKTYLFFNRHIDLIILCCFCGVA 419
+ +L +R++++ RL LS+ + + LF+ L ++ L +RH+D I++C G+
Sbjct: 645 VFRLAYLRLHTLFFRL-LSEHPDLEPLIWTLFQHTLQNESELMRDRHLDQIMMCSMYGIC 703
Query: 420 KINKLKLKFEEITDNYVKEPQCRSQDFGFVFAGWLSKHKGKNRENYKSIDAFYN 473
K+ + L+F+ I Y + P + F V E Y SI FYN
Sbjct: 704 KVKNVDLRFKTIVSAYKELPNTNQETFKRVLI---------REEQYDSIIVFYN 748
>UNIPROTKB|Q90600 [details] [associations]
symbol:RB1 "Retinoblastoma-associated protein" species:9031
"Gallus gallus" [GO:0051726 "regulation of cell cycle"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0016568 "chromatin
modification" evidence=IEA] [GO:0019048 "virus-host interaction"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR002719 InterPro:IPR002720 Pfam:PF01857 Pfam:PF01858
GO:GO:0005634 GO:GO:0019048 GO:GO:0006355 GO:GO:0003677
GO:GO:0006351 GO:GO:0016568 GO:GO:0007049 GO:GO:0051726
Gene3D:1.10.472.10 InterPro:IPR013763 SMART:SM00385 SUPFAM:SSF47954
eggNOG:NOG296920 InterPro:IPR024599 Pfam:PF11934 InterPro:IPR015030
Pfam:PF08934 HSSP:P06400 EMBL:X72218 EMBL:U00113 EMBL:X72217
IPI:IPI00592698 PIR:S45298 RefSeq:NP_989750.1 UniGene:Gga.2986
ProteinModelPortal:Q90600 SMR:Q90600 STRING:Q90600 GeneID:386582
KEGG:gga:386582 CTD:5925 HOGENOM:HOG000136539 HOVERGEN:HBG008967
KO:K06618 NextBio:20813945 InterPro:IPR015652
PANTHER:PTHR13742:SF10 Uniprot:Q90600
Length = 921
Score = 219 (82.2 bits), Expect = 4.9e-23, Sum P(2) = 4.9e-23
Identities = 75/250 (30%), Positives = 120/250 (48%)
Query: 31 TPVRTAQNTASNWLKTVIAPLPSKPSAELEKFLSLGSVSIANEVESGANIVLEAIFPSIK 90
TPVR A NT L ++ KPS L + + +V N +S +L+ +
Sbjct: 363 TPVRAAMNTIQQ-LMMILNSATDKPSDTLIAYFNNCTV---NPEDS----ILKRVE---S 411
Query: 91 LGERLFNWSLLNVNLMDSLWSGQERTE-ALKLYYKVLESICASEAGKSSSRDLSGLLTNE 149
LG +F G +R + ++LYY+V+ES+ SE + S + S LL +
Sbjct: 412 LGH-IFKKKFAEAVGQGCAEIGSQRYQLGVRLYYRVMESMLKSEEERLSVHNFSKLLNDN 470
Query: 150 KFHRCMLACSAELV--SMART---------RVSILFPLILERAGITAFDMCKVTESFIRH 198
FH +LAC+ E+V + RT + FP IL + AFD KV ESFI+
Sbjct: 471 IFHTSLLACALEIVMATYGRTASQSDGTSAETDLSFPWILNVFDLKAFDFYKVIESFIKV 530
Query: 199 EDSLPRELMRHLNSLEETMLESMVWEKGSSLYNSLIASRPDLQEEIKRLKLLAEPMPSLH 258
E SL R++++HL E ++ES+ W+ S L++ LI + + + + EP +L+
Sbjct: 531 EPSLTRDMIKHLERCEHRIMESLAWQSDSPLFD-LIKQSKEREGQTDQ----PEPTSTLN 585
Query: 259 EISMNNHLAS 268
+NH A+
Sbjct: 586 LPLQHNHTAA 595
Score = 128 (50.1 bits), Expect = 4.9e-23, Sum P(2) = 4.9e-23
Identities = 45/174 (25%), Positives = 80/174 (45%)
Query: 302 KHNSYATAMKVDSPVVDSHQVKLQPVTPSSQTAFMSPVQSKTPKDGGIKMDAAVTFLFNK 361
+HN A + + SPV S + K P S T+ S T + + +++ + K
Sbjct: 589 QHNHTAADLYL-SPV-RSPKKKASG-HPQSGTSNPDAQPSATSQTQKPQKSTSLSLFYKK 645
Query: 362 MTKLGAVRINSMAERLKLSQQ--IREKTYLLFRQILVEKTYLFFNRHIDLIILCCFCGVA 419
+ +L +R++++ RL LS+ + + LF+ L ++ L +RH+D I++C G+
Sbjct: 646 VFRLAYLRLHTLFFRL-LSEHPDLEPLIWTLFQHTLQNESELMRDRHLDQIMMCSMYGIC 704
Query: 420 KINKLKLKFEEITDNYVKEPQCRSQDFGFVFAGWLSKHKGKNRENYKSIDAFYN 473
K+ + L+F+ I Y + P + F V E Y SI FYN
Sbjct: 705 KVKNVDLRFKTIVSAYKELPNTNQETFKRVLI---------REEQYDSIIVFYN 749
>UNIPROTKB|F1RK14 [details] [associations]
symbol:RB1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071930 "negative regulation of transcription involved
in G1/S phase of mitotic cell cycle" evidence=IEA] [GO:0071922
"regulation of cohesin localization to chromatin" evidence=IEA]
[GO:0071459 "protein localization to chromosome, centromeric
region" evidence=IEA] [GO:0051402 "neuron apoptotic process"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0051219
"phosphoprotein binding" evidence=IEA] [GO:0051146 "striated muscle
cell differentiation" evidence=IEA] [GO:0050680 "negative
regulation of epithelial cell proliferation" evidence=IEA]
[GO:0048667 "cell morphogenesis involved in neuron differentiation"
evidence=IEA] [GO:0048565 "digestive tract development"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0045879
"negative regulation of smoothened signaling pathway" evidence=IEA]
[GO:0045842 "positive regulation of mitotic metaphase/anaphase
transition" evidence=IEA] [GO:0045651 "positive regulation of
macrophage differentiation" evidence=IEA] [GO:0045445 "myoblast
differentiation" evidence=IEA] [GO:0043550 "regulation of lipid
kinase activity" evidence=IEA] [GO:0043353 "enucleate erythrocyte
differentiation" evidence=IEA] [GO:0042551 "neuron maturation"
evidence=IEA] [GO:0035189 "Rb-E2F complex" evidence=IEA]
[GO:0034088 "maintenance of mitotic sister chromatid cohesion"
evidence=IEA] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0031175 "neuron projection development"
evidence=IEA] [GO:0031134 "sister chromatid biorientation"
evidence=IEA] [GO:0019900 "kinase binding" evidence=IEA]
[GO:0016605 "PML body" evidence=IEA] [GO:0007265 "Ras protein
signal transduction" evidence=IEA] [GO:0007090 "regulation of S
phase of mitotic cell cycle" evidence=IEA] [GO:0007050 "cell cycle
arrest" evidence=IEA] [GO:0006469 "negative regulation of protein
kinase activity" evidence=IEA] [GO:0005819 "spindle" evidence=IEA]
[GO:0001102 "RNA polymerase II activating transcription factor
binding" evidence=IEA] [GO:0001047 "core promoter binding"
evidence=IEA] InterPro:IPR002719 InterPro:IPR002720 Pfam:PF01857
Pfam:PF01858 GO:GO:0007265 GO:GO:0051301 GO:GO:0005819
GO:GO:0006469 GO:GO:0016605 GO:GO:0045944 GO:GO:0051402
GO:GO:0007050 GO:GO:0001047 GO:GO:0051146 GO:GO:0031175
GO:GO:0048565 GO:GO:0071459 GO:GO:0050680 GO:GO:0045445
Gene3D:1.10.472.10 InterPro:IPR013763 SMART:SM00385 SUPFAM:SSF47954
GO:GO:0031134 GO:GO:0007090 GO:GO:0045651 GO:GO:0071922
GO:GO:0045842 GO:GO:0045879 GO:GO:0042551 GO:GO:0035189
GO:GO:0043353 GO:GO:0034088 GO:GO:0071930 GO:GO:0048667
GeneTree:ENSGT00530000063235 InterPro:IPR024599 Pfam:PF11934
GO:GO:0043550 InterPro:IPR015030 Pfam:PF08934 CTD:5925 KO:K06618
InterPro:IPR015652 PANTHER:PTHR13742:SF10 OMA:TNILQYA EMBL:CU457728
EMBL:CU406986 RefSeq:XP_001926888.4 Ensembl:ENSSSCT00000010300
GeneID:100151828 KEGG:ssc:100151828 Uniprot:F1RK14
Length = 938
Score = 219 (82.2 bits), Expect = 5.2e-23, Sum P(2) = 5.2e-23
Identities = 73/242 (30%), Positives = 113/242 (46%)
Query: 31 TPVRTAQNTASNWLKTVIAPLPSKPSAELEKFLSLGSVSIANEVESGANIVLEAIFPSIK 90
TPVRT NT L ++ +PS L + + +V N ES I +K
Sbjct: 382 TPVRTVMNTIQQ-LMMILNSASDQPSENLISYFNNCTV---NPKES--------ILKRVK 429
Query: 91 LGERLFNWSLLNVNLMDSLWSGQERTE-ALKLYYKVLESICASEAGKSSSRDLSGLLTNE 149
+F + G +R + ++LYY+V+ES+ SE + S ++ S LL +
Sbjct: 430 DIGYIFKEQFAKAVGQGCMEIGSQRYKLGVRLYYRVMESMLKSEEERLSIQNFSKLLNDN 489
Query: 150 KFHRCMLACSAELVSMARTR---------VSILFPLILERAGITAFDMCKVTESFIRHED 200
FH +LAC+ E+V +R + FP IL + AFD KV ESFI+ E
Sbjct: 490 IFHMSLLACALEVVMATYSRSTSQNLDTGTDLSFPWILNVLNLKAFDFYKVIESFIKAEA 549
Query: 201 SLPRELMRHLNSLEETMLESMVWEKGSSLYNSLIASRPDLQEEIKRLK----LLAEPMPS 256
+L RE+++HL E ++ES+ W S L++ LI D + L+ L+ P+ S
Sbjct: 550 NLTREMIKHLERCEHRIMESLAWRSDSPLFD-LIKQAKDREGPADHLESACTLINLPLQS 608
Query: 257 LH 258
H
Sbjct: 609 NH 610
Score = 128 (50.1 bits), Expect = 5.2e-23, Sum P(2) = 5.2e-23
Identities = 40/148 (27%), Positives = 69/148 (46%)
Query: 328 TPSSQTAFMSPVQSKTPKDGGIKMDAAVTFLFNKMTKLGAVRINSMAERLKLSQ--QIRE 385
T +S+ S Q++ P +K +++ + K+ +L +R+N++ RL LS ++
Sbjct: 635 TANSEAQATSTFQTQKP----LK-STSLSLFYKKVYRLAYLRLNTLCARL-LSDHPELEH 688
Query: 386 KTYLLFRQILVEKTYLFFNRHIDLIILCCFCGVAKINKLKLKFEEITDNYVKEPQCRSQD 445
+ LF+ L + L +RH+D I++C G+ K+ + LKF+ I Y P +
Sbjct: 689 IIWTLFQHTLQNEYELMRDRHLDQIMMCSMYGICKVKNIDLKFKIIVTAYKDLPHAVQET 748
Query: 446 FGFVFAGWLSKHKGKNRENYKSIDAFYN 473
F V E Y SI FYN
Sbjct: 749 FKRVLI---------REEEYDSIIVFYN 767
>UNIPROTKB|F1NV90 [details] [associations]
symbol:RB1 "Retinoblastoma-associated protein" species:9031
"Gallus gallus" [GO:0005634 "nucleus" evidence=IEA] [GO:0051726
"regulation of cell cycle" evidence=IEA] InterPro:IPR002719
InterPro:IPR002720 Pfam:PF01857 Pfam:PF01858 GO:GO:0005634
GO:GO:0051726 Gene3D:1.10.472.10 InterPro:IPR013763 SMART:SM00385
SUPFAM:SSF47954 GeneTree:ENSGT00530000063235 InterPro:IPR024599
Pfam:PF11934 InterPro:IPR015030 Pfam:PF08934 InterPro:IPR015652
PANTHER:PTHR13742:SF10 EMBL:AADN02005407 EMBL:AADN02005408
EMBL:AADN02005409 IPI:IPI00818985 Ensembl:ENSGALT00000027459
ArrayExpress:F1NV90 Uniprot:F1NV90
Length = 881
Score = 218 (81.8 bits), Expect = 5.6e-23, Sum P(2) = 5.6e-23
Identities = 78/253 (30%), Positives = 119/253 (47%)
Query: 31 TPVRTAQNTASNWLKTVIAPLPSKPSAELEKFLSLGSV----SIANEVESGANIVLEAIF 86
TPVR A NT L ++ KPS L + + +V SI VES L IF
Sbjct: 321 TPVRAAMNTIQQ-LMMILNSATDKPSDTLIAYFNNCTVNPEDSILKRVES-----LGHIF 374
Query: 87 PSIKLGERLFNWSLLNVNLMDSLWSGQERTEALKLYYKVLESICASEAGKSSSRDLSGLL 146
K E + + S + ++LYY+V+ES+ SE + S + S LL
Sbjct: 375 KK-KFAEAV-GQGCAEIGSQASRYQ-----LGVRLYYRVMESMLKSEEERLSVHNFSKLL 427
Query: 147 TNEKFHRCMLACSAELV--SMART---------RVSILFPLILERAGITAFDMCKVTESF 195
+ FH +LAC+ E+V + RT + FP IL + AFD KV ESF
Sbjct: 428 NDNIFHTSLLACALEIVMATYGRTASQSDGTSAETDLSFPWILNVFDLKAFDFYKVIESF 487
Query: 196 IRHEDSLPRELMRHLNSLEETMLESMVWEKGSSLYNSLIASRPDLQEEIKRLKLLAEPMP 255
I+ E SL R++++HL E ++ES+ W+ S L++ LI + + + + EP
Sbjct: 488 IKVEPSLTRDMIKHLERCEHRIMESLAWQSDSPLFD-LIKQSKEREGQTDQ----PEPTS 542
Query: 256 SLHEISMNNHLAS 268
+L+ +NH A+
Sbjct: 543 TLNLPLQHNHTAA 555
Score = 128 (50.1 bits), Expect = 5.6e-23, Sum P(2) = 5.6e-23
Identities = 45/174 (25%), Positives = 80/174 (45%)
Query: 302 KHNSYATAMKVDSPVVDSHQVKLQPVTPSSQTAFMSPVQSKTPKDGGIKMDAAVTFLFNK 361
+HN A + + SPV S + K P S T+ S T + + +++ + K
Sbjct: 549 QHNHTAADLYL-SPV-RSPKKKASG-HPQSGTSNPDAQPSATSQTQKPQKSTSLSLFYKK 605
Query: 362 MTKLGAVRINSMAERLKLSQQ--IREKTYLLFRQILVEKTYLFFNRHIDLIILCCFCGVA 419
+ +L +R++++ RL LS+ + + LF+ L ++ L +RH+D I++C G+
Sbjct: 606 VFRLAYLRLHTLFFRL-LSEHPDLEPLIWTLFQHTLQNESELMRDRHLDQIMMCSMYGIC 664
Query: 420 KINKLKLKFEEITDNYVKEPQCRSQDFGFVFAGWLSKHKGKNRENYKSIDAFYN 473
K+ + L+F+ I Y + P + F V E Y SI FYN
Sbjct: 665 KVKNVDLRFKTIVSAYKELPNTNQETFKRVLI---------REEQYDSIIVFYN 709
>UNIPROTKB|F1NAY1 [details] [associations]
symbol:RB1 "Retinoblastoma-associated protein" species:9031
"Gallus gallus" [GO:0001047 "core promoter binding" evidence=IEA]
[GO:0001102 "RNA polymerase II activating transcription factor
binding" evidence=IEA] [GO:0005819 "spindle" evidence=IEA]
[GO:0006469 "negative regulation of protein kinase activity"
evidence=IEA] [GO:0007050 "cell cycle arrest" evidence=IEA]
[GO:0007090 "regulation of S phase of mitotic cell cycle"
evidence=IEA] [GO:0007265 "Ras protein signal transduction"
evidence=IEA] [GO:0016605 "PML body" evidence=IEA] [GO:0019900
"kinase binding" evidence=IEA] [GO:0031134 "sister chromatid
biorientation" evidence=IEA] [GO:0031175 "neuron projection
development" evidence=IEA] [GO:0031625 "ubiquitin protein ligase
binding" evidence=IEA] [GO:0034088 "maintenance of mitotic sister
chromatid cohesion" evidence=IEA] [GO:0035189 "Rb-E2F complex"
evidence=IEA] [GO:0042551 "neuron maturation" evidence=IEA]
[GO:0043353 "enucleate erythrocyte differentiation" evidence=IEA]
[GO:0043550 "regulation of lipid kinase activity" evidence=IEA]
[GO:0045445 "myoblast differentiation" evidence=IEA] [GO:0045651
"positive regulation of macrophage differentiation" evidence=IEA]
[GO:0045842 "positive regulation of mitotic metaphase/anaphase
transition" evidence=IEA] [GO:0045879 "negative regulation of
smoothened signaling pathway" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0048565 "digestive tract development"
evidence=IEA] [GO:0048667 "cell morphogenesis involved in neuron
differentiation" evidence=IEA] [GO:0050680 "negative regulation of
epithelial cell proliferation" evidence=IEA] [GO:0051146 "striated
muscle cell differentiation" evidence=IEA] [GO:0051219
"phosphoprotein binding" evidence=IEA] [GO:0051301 "cell division"
evidence=IEA] [GO:0051402 "neuron apoptotic process" evidence=IEA]
[GO:0071459 "protein localization to chromosome, centromeric
region" evidence=IEA] [GO:0071922 "regulation of cohesin
localization to chromatin" evidence=IEA] [GO:0071930 "negative
regulation of transcription involved in G1/S phase of mitotic cell
cycle" evidence=IEA] InterPro:IPR002719 InterPro:IPR002720
Pfam:PF01857 Pfam:PF01858 GO:GO:0007265 GO:GO:0051301 GO:GO:0005819
GO:GO:0006469 GO:GO:0016605 GO:GO:0045944 GO:GO:0051402
GO:GO:0007050 GO:GO:0001047 GO:GO:0071459 GO:GO:0050680
Gene3D:1.10.472.10 InterPro:IPR013763 SMART:SM00385 SUPFAM:SSF47954
GO:GO:0031134 GO:GO:0007090 GO:GO:0045651 GO:GO:0071922
GO:GO:0045842 GO:GO:0045879 GO:GO:0035189 GO:GO:0034088
GO:GO:0071930 GeneTree:ENSGT00530000063235 InterPro:IPR024599
Pfam:PF11934 GO:GO:0043550 InterPro:IPR015030 Pfam:PF08934
InterPro:IPR015652 PANTHER:PTHR13742:SF10 OMA:TNILQYA
EMBL:AADN02005407 EMBL:AADN02005408 EMBL:AADN02005409
IPI:IPI00819754 Ensembl:ENSGALT00000036486 ArrayExpress:F1NAY1
Uniprot:F1NAY1
Length = 962
Score = 219 (82.2 bits), Expect = 5.6e-23, Sum P(2) = 5.6e-23
Identities = 75/250 (30%), Positives = 120/250 (48%)
Query: 31 TPVRTAQNTASNWLKTVIAPLPSKPSAELEKFLSLGSVSIANEVESGANIVLEAIFPSIK 90
TPVR A NT L ++ KPS L + + +V N +S +L+ +
Sbjct: 416 TPVRAAMNTIQQ-LMMILNSATDKPSDTLIAYFNNCTV---NPEDS----ILKRVE---S 464
Query: 91 LGERLFNWSLLNVNLMDSLWSGQERTE-ALKLYYKVLESICASEAGKSSSRDLSGLLTNE 149
LG +F G +R + ++LYY+V+ES+ SE + S + S LL +
Sbjct: 465 LGH-IFKKKFAEAVGQGCAEIGSQRYQLGVRLYYRVMESMLKSEEERLSVHNFSKLLNDN 523
Query: 150 KFHRCMLACSAELV--SMART---------RVSILFPLILERAGITAFDMCKVTESFIRH 198
FH +LAC+ E+V + RT + FP IL + AFD KV ESFI+
Sbjct: 524 IFHTSLLACALEIVMATYGRTASQSDGTSAETDLSFPWILNVFDLKAFDFYKVIESFIKV 583
Query: 199 EDSLPRELMRHLNSLEETMLESMVWEKGSSLYNSLIASRPDLQEEIKRLKLLAEPMPSLH 258
E SL R++++HL E ++ES+ W+ S L++ LI + + + + EP +L+
Sbjct: 584 EPSLTRDMIKHLERCEHRIMESLAWQSDSPLFD-LIKQSKEREGQTDQ----PEPTSTLN 638
Query: 259 EISMNNHLAS 268
+NH A+
Sbjct: 639 LPLQHNHTAA 648
Score = 128 (50.1 bits), Expect = 5.6e-23, Sum P(2) = 5.6e-23
Identities = 45/174 (25%), Positives = 80/174 (45%)
Query: 302 KHNSYATAMKVDSPVVDSHQVKLQPVTPSSQTAFMSPVQSKTPKDGGIKMDAAVTFLFNK 361
+HN A + + SPV S + K P S T+ S T + + +++ + K
Sbjct: 642 QHNHTAADLYL-SPV-RSPKKKASG-HPQSGTSNPDAQPSATSQTQKPQKSTSLSLFYKK 698
Query: 362 MTKLGAVRINSMAERLKLSQQ--IREKTYLLFRQILVEKTYLFFNRHIDLIILCCFCGVA 419
+ +L +R++++ RL LS+ + + LF+ L ++ L +RH+D I++C G+
Sbjct: 699 VFRLAYLRLHTLFFRL-LSEHPDLEPLIWTLFQHTLQNESELMRDRHLDQIMMCSMYGIC 757
Query: 420 KINKLKLKFEEITDNYVKEPQCRSQDFGFVFAGWLSKHKGKNRENYKSIDAFYN 473
K+ + L+F+ I Y + P + F V E Y SI FYN
Sbjct: 758 KVKNVDLRFKTIVSAYKELPNTNQETFKRVLI---------REEQYDSIIVFYN 802
>UNIPROTKB|F1NAY3 [details] [associations]
symbol:RB1 "Retinoblastoma-associated protein" species:9031
"Gallus gallus" [GO:0005634 "nucleus" evidence=IEA] [GO:0051726
"regulation of cell cycle" evidence=IEA] InterPro:IPR002719
InterPro:IPR002720 Pfam:PF01857 Pfam:PF01858 GO:GO:0005634
GO:GO:0051726 Gene3D:1.10.472.10 InterPro:IPR013763 SMART:SM00385
SUPFAM:SSF47954 GeneTree:ENSGT00530000063235 InterPro:IPR024599
Pfam:PF11934 InterPro:IPR015030 Pfam:PF08934 IPI:IPI00592698
InterPro:IPR015652 PANTHER:PTHR13742:SF10 EMBL:AADN02005407
EMBL:AADN02005408 EMBL:AADN02005409 Ensembl:ENSGALT00000036484
ArrayExpress:F1NAY3 Uniprot:F1NAY3
Length = 920
Score = 218 (81.8 bits), Expect = 6.3e-23, Sum P(2) = 6.3e-23
Identities = 78/253 (30%), Positives = 119/253 (47%)
Query: 31 TPVRTAQNTASNWLKTVIAPLPSKPSAELEKFLSLGSV----SIANEVESGANIVLEAIF 86
TPVR A NT L ++ KPS L + + +V SI VES L IF
Sbjct: 360 TPVRAAMNTIQQ-LMMILNSATDKPSDTLIAYFNNCTVNPEDSILKRVES-----LGHIF 413
Query: 87 PSIKLGERLFNWSLLNVNLMDSLWSGQERTEALKLYYKVLESICASEAGKSSSRDLSGLL 146
K E + + S + ++LYY+V+ES+ SE + S + S LL
Sbjct: 414 KK-KFAEAV-GQGCAEIGSQASRYQ-----LGVRLYYRVMESMLKSEEERLSVHNFSKLL 466
Query: 147 TNEKFHRCMLACSAELV--SMART---------RVSILFPLILERAGITAFDMCKVTESF 195
+ FH +LAC+ E+V + RT + FP IL + AFD KV ESF
Sbjct: 467 NDNIFHTSLLACALEIVMATYGRTASQSDGTSAETDLSFPWILNVFDLKAFDFYKVIESF 526
Query: 196 IRHEDSLPRELMRHLNSLEETMLESMVWEKGSSLYNSLIASRPDLQEEIKRLKLLAEPMP 255
I+ E SL R++++HL E ++ES+ W+ S L++ LI + + + + EP
Sbjct: 527 IKVEPSLTRDMIKHLERCEHRIMESLAWQSDSPLFD-LIKQSKEREGQTDQ----PEPTS 581
Query: 256 SLHEISMNNHLAS 268
+L+ +NH A+
Sbjct: 582 TLNLPLQHNHTAA 594
Score = 128 (50.1 bits), Expect = 6.3e-23, Sum P(2) = 6.3e-23
Identities = 45/174 (25%), Positives = 80/174 (45%)
Query: 302 KHNSYATAMKVDSPVVDSHQVKLQPVTPSSQTAFMSPVQSKTPKDGGIKMDAAVTFLFNK 361
+HN A + + SPV S + K P S T+ S T + + +++ + K
Sbjct: 588 QHNHTAADLYL-SPV-RSPKKKASG-HPQSGTSNPDAQPSATSQTQKPQKSTSLSLFYKK 644
Query: 362 MTKLGAVRINSMAERLKLSQQ--IREKTYLLFRQILVEKTYLFFNRHIDLIILCCFCGVA 419
+ +L +R++++ RL LS+ + + LF+ L ++ L +RH+D I++C G+
Sbjct: 645 VFRLAYLRLHTLFFRL-LSEHPDLEPLIWTLFQHTLQNESELMRDRHLDQIMMCSMYGIC 703
Query: 420 KINKLKLKFEEITDNYVKEPQCRSQDFGFVFAGWLSKHKGKNRENYKSIDAFYN 473
K+ + L+F+ I Y + P + F V E Y SI FYN
Sbjct: 704 KVKNVDLRFKTIVSAYKELPNTNQETFKRVLI---------REEQYDSIIVFYN 748
>MGI|MGI:97874 [details] [associations]
symbol:Rb1 "retinoblastoma 1" species:10090 "Mus musculus"
[GO:0000082 "G1/S transition of mitotic cell cycle" evidence=IMP]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IGI;IDA] [GO:0001047 "core
promoter binding" evidence=ISO] [GO:0001102 "RNA polymerase II
activating transcription factor binding" evidence=IPI] [GO:0003677
"DNA binding" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0005667
"transcription factor complex" evidence=IDA] [GO:0005819 "spindle"
evidence=IDA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0006469 "negative regulation of
protein kinase activity" evidence=ISO] [GO:0007049 "cell cycle"
evidence=IEA] [GO:0007050 "cell cycle arrest" evidence=IMP]
[GO:0007090 "regulation of S phase of mitotic cell cycle"
evidence=IMP] [GO:0007346 "regulation of mitotic cell cycle"
evidence=ISO;IMP] [GO:0008134 "transcription factor binding"
evidence=ISO;IPI] [GO:0008285 "negative regulation of cell
proliferation" evidence=IGI;IMP] [GO:0016568 "chromatin
modification" evidence=IEA] [GO:0016605 "PML body" evidence=ISO]
[GO:0019899 "enzyme binding" evidence=IPI] [GO:0019900 "kinase
binding" evidence=ISO] [GO:0030182 "neuron differentiation"
evidence=IMP] [GO:0031134 "sister chromatid biorientation"
evidence=ISO] [GO:0031175 "neuron projection development"
evidence=IMP] [GO:0031625 "ubiquitin protein ligase binding"
evidence=ISO] [GO:0034088 "maintenance of mitotic sister chromatid
cohesion" evidence=ISO] [GO:0035189 "Rb-E2F complex" evidence=IDA]
[GO:0035914 "skeletal muscle cell differentiation" evidence=IMP]
[GO:0042551 "neuron maturation" evidence=IMP] [GO:0043353
"enucleate erythrocyte differentiation" evidence=IGI] [GO:0043550
"regulation of lipid kinase activity" evidence=ISO] [GO:0045445
"myoblast differentiation" evidence=ISO] [GO:0045651 "positive
regulation of macrophage differentiation" evidence=IGI] [GO:0045786
"negative regulation of cell cycle" evidence=IMP] [GO:0045842
"positive regulation of mitotic metaphase/anaphase transition"
evidence=ISO] [GO:0045879 "negative regulation of smoothened
signaling pathway" evidence=IMP] [GO:0045892 "negative regulation
of transcription, DNA-dependent" evidence=ISO;IDA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IGI;IMP;IDA] [GO:0048565 "digestive tract
development" evidence=IMP] [GO:0048667 "cell morphogenesis involved
in neuron differentiation" evidence=IMP] [GO:0050680 "negative
regulation of epithelial cell proliferation" evidence=IMP]
[GO:0051146 "striated muscle cell differentiation" evidence=IGI]
[GO:0051219 "phosphoprotein binding" evidence=ISO] [GO:0051301
"cell division" evidence=IMP] [GO:0051402 "neuron apoptotic
process" evidence=IMP] [GO:0051726 "regulation of cell cycle"
evidence=IMP] [GO:0071459 "protein localization to chromosome,
centromeric region" evidence=ISO] [GO:0071922 "regulation of
cohesin localization to chromatin" evidence=ISO] [GO:0071930
"negative regulation of transcription involved in G1/S phase of
mitotic cell cycle" evidence=IGI] InterPro:IPR002719
InterPro:IPR002720 Pfam:PF01857 Pfam:PF01858 MGI:MGI:97874
GO:GO:0007265 GO:GO:0051301 GO:GO:0005819 GO:GO:0006469
GO:GO:0016605 GO:GO:0045944 GO:GO:0051402 GO:GO:0007050
GO:GO:0006351 GO:GO:0016568 GO:GO:0019900 GO:GO:0001047
GO:GO:0008134 GO:GO:0031175 GO:GO:0048565 GO:GO:0071459
GO:GO:0050680 GO:GO:0035914 GO:GO:0045445 Gene3D:1.10.472.10
InterPro:IPR013763 SMART:SM00385 SUPFAM:SSF47954 GO:GO:0031134
GO:GO:0007090 GO:GO:0045651 GO:GO:0071922 GO:GO:0045842
GO:GO:0045879 GO:GO:0042551 GO:GO:0035189 GO:GO:0043353
GO:GO:0034088 GO:GO:0071930 GO:GO:0048667 eggNOG:NOG296920
GeneTree:ENSGT00530000063235 InterPro:IPR024599 Pfam:PF11934
GO:GO:0043550 InterPro:IPR015030 Pfam:PF08934 CTD:5925
HOGENOM:HOG000136539 HOVERGEN:HBG008967 KO:K06618
InterPro:IPR015652 PANTHER:PTHR13742:SF10 OMA:TNILQYA
OrthoDB:EOG4TXBRB EMBL:M26391 EMBL:DQ400415 EMBL:BC096525
IPI:IPI00121418 PIR:A33718 RefSeq:NP_033055.2 UniGene:Mm.273862
ProteinModelPortal:P13405 SMR:P13405 DIP:DIP-37637N IntAct:P13405
MINT:MINT-225292 STRING:P13405 PhosphoSite:P13405 PaxDb:P13405
PRIDE:P13405 Ensembl:ENSMUST00000022701 GeneID:19645 KEGG:mmu:19645
InParanoid:Q4VA62 NextBio:296890 Bgee:P13405 CleanEx:MM_RB1
Genevestigator:P13405 GermOnline:ENSMUSG00000022105 Uniprot:P13405
Length = 921
Score = 221 (82.9 bits), Expect = 2.0e-22, Sum P(2) = 2.0e-22
Identities = 73/247 (29%), Positives = 119/247 (48%)
Query: 4 PVEA--TNSTSPPCSPASQSNGSMAKMTP-TPVRTAQNTASNWLKTVIAPLPSKPSAELE 60
P+++ T T +P ++N +TP TPVRT NT L ++ +PS L
Sbjct: 341 PIDSFETERTPRKNNPDEEAN----VVTPHTPVRTVMNTIQQ-LMVILNSASDQPSENLI 395
Query: 61 KFLSLGSVSIANEVESGANIVLEAIFPSIKLGERLFNWSLLNVNLMDSLWSGQERTE-AL 119
+ + +V N E+ I +K +F N + G +R + +
Sbjct: 396 SYFNNCTV---NPKEN--------ILKRVKDVGHIFKEKFANAVGQGCVDIGVQRYKLGV 444
Query: 120 KLYYKVLESICASEAGKSSSRDLSGLLTNEKFHRCMLACSAELVSMARTR---------V 170
+LYY+V+ES+ SE + S ++ S LL + FH +LAC+ E+V +R
Sbjct: 445 RLYYRVMESMLKSEEERLSIQNFSKLLNDNIFHMSLLACALEVVMATYSRSTLQHLDSGT 504
Query: 171 SILFPLILERAGITAFDMCKVTESFIRHEDSLPRELMRHLNSLEETMLESMVWEKGSSLY 230
+ FP IL + AFD KV ESFI+ E +L RE+++HL E ++ES+ W S L+
Sbjct: 505 DLSFPWILNVLNLKAFDFYKVIESFIKVEANLTREMIKHLERCEHRIMESLAWLSDSPLF 564
Query: 231 NSLIASR 237
+ + S+
Sbjct: 565 DLIKQSK 571
Score = 120 (47.3 bits), Expect = 2.0e-22, Sum P(2) = 2.0e-22
Identities = 33/122 (27%), Positives = 57/122 (46%)
Query: 354 AVTFLFNKMTKLGAVRINSMAERLKLSQ--QIREKTYLLFRQILVEKTYLFFNRHIDLII 411
++ + K+ +L +R+N++ RL LS ++ + LF+ L + L +RH+D I+
Sbjct: 639 SLALFYKKVYRLAYLRLNTLCARL-LSDHPELEHIIWTLFQHTLQNEYELMRDRHLDQIM 697
Query: 412 LCCFCGVAKINKLKLKFEEITDNYVKEPQCRSQDFGFVFAGWLSKHKGKNRENYKSIDAF 471
+C G+ K+ + LKF+ I Y P + F V E + SI F
Sbjct: 698 MCSMYGICKVKNIDLKFKIIVTAYKDLPHAAQETFKRVLI---------REEEFDSIIVF 748
Query: 472 YN 473
YN
Sbjct: 749 YN 750
>UNIPROTKB|F1PQ32 [details] [associations]
symbol:RB1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0051726 "regulation of cell cycle"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR002719 InterPro:IPR002720 Pfam:PF01857 Pfam:PF01858
GO:GO:0005634 GO:GO:0051726 Gene3D:1.10.472.10 InterPro:IPR013763
SMART:SM00385 SUPFAM:SSF47954 GeneTree:ENSGT00530000063235
InterPro:IPR024599 Pfam:PF11934 InterPro:IPR015030 Pfam:PF08934
InterPro:IPR015652 PANTHER:PTHR13742:SF10 OMA:TNILQYA
EMBL:AAEX03013115 EMBL:AAEX03013116 EMBL:AAEX03013117
EMBL:AAEX03013118 Ensembl:ENSCAFT00000007150 Uniprot:F1PQ32
Length = 928
Score = 212 (79.7 bits), Expect = 4.9e-22, Sum P(2) = 4.9e-22
Identities = 83/292 (28%), Positives = 133/292 (45%)
Query: 5 VEATNSTSPPCSPA-SQSNGSMAKMTP-TPVRTAQNTASNWLKTVIAPLPSKPSAELEKF 62
++ T+S +P S S+ + + P TPVRT NT L ++ +PS L +
Sbjct: 348 IDPTDSFEMQRTPQKSNSDEEVNVILPQTPVRTVMNTIQQ-LMMILNSASDQPSENLISY 406
Query: 63 LSLGSVSIANEVESGANIVLEAIFPSIKLGERLFNWSLLNVNLMDSLWSGQERTE-ALKL 121
+ +V N ES I +K +F + G +R + ++L
Sbjct: 407 FNNCTV---NPKES--------ILKRVKDVGYIFKEKFAKAVGQGCMEIGSQRYKLGVRL 455
Query: 122 YYKVLESICASEAGKSSSRDLSGLLTNEKFHRCMLACSAELVSMARTR---------VSI 172
YY+V+ES+ S + S ++ S LL ++ FH +LAC+ E+V +R +
Sbjct: 456 YYRVMESMLKS---RLSIQNFSKLLNDDIFHMSLLACALEVVMATYSRSTSQNLDTGTDL 512
Query: 173 LFPLILERAGITAFDMCKVTESFIRHEDSLPRELMRHLNSLEETMLESMVWEKGSSLYNS 232
FP IL + AFD KV ESFI+ E +L RE+++HL E ++ES+ W S L++
Sbjct: 513 SFPWILNVLNLKAFDFYKVIESFIKAEANLTREMIKHLERCEHRIMESLAWLSDSPLFD- 571
Query: 233 LIASRPDLQEEIKRLKLLAEPMPSLHEISMNNHLASGVLAYQHNLHKHKPST 284
LI D + L E +L+ +NH A+ + K K ST
Sbjct: 572 LIKQAKDREGPADHL----ESACTLNLPLQSNHTAADMYLSPVRSPKKKGST 619
Score = 126 (49.4 bits), Expect = 4.9e-22, Sum P(2) = 4.9e-22
Identities = 42/164 (25%), Positives = 75/164 (45%)
Query: 312 VDSPVVDSHQVKLQPVTPSSQTAFMSPVQSKTPKDGGIKMDAAVTFLFNKMTKLGAVRIN 371
V SP +++ T +++ S Q++ P +K +++ + K+ +L +R+N
Sbjct: 610 VRSPKKKGSTIRVNS-TVNTEAQATSAFQTQKP----LK-STSLSLFYKKVYRLAYLRLN 663
Query: 372 SMAERLKLSQ--QIREKTYLLFRQILVEKTYLFFNRHIDLIILCCFCGVAKINKLKLKFE 429
++ RL LS ++ + LF+ L + L +RH+D I++C G+ K+ + LKF+
Sbjct: 664 TLCARL-LSDHPELEHIIWTLFQHTLQNEYELMRDRHLDQIMMCSMYGICKVKNIDLKFK 722
Query: 430 EITDNYVKEPQCRSQDFGFVFAGWLSKHKGKNRENYKSIDAFYN 473
I Y P + F V E Y SI FYN
Sbjct: 723 IIVTAYKDLPHAVQETFKRVLI---------REEEYDSIIVFYN 757
Score = 38 (18.4 bits), Expect = 7.1e-13, Sum P(2) = 7.1e-13
Identities = 10/29 (34%), Positives = 18/29 (62%)
Query: 330 SSQTA---FMSPVQSKTPKDGGIKMDAAV 355
S+ TA ++SPV+S K I++++ V
Sbjct: 598 SNHTAADMYLSPVRSPKKKGSTIRVNSTV 626
>UNIPROTKB|F1NEZ1 [details] [associations]
symbol:F1NEZ1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005634 "nucleus" evidence=IEA] [GO:0051726
"regulation of cell cycle" evidence=IEA] InterPro:IPR002720
Pfam:PF01858 GO:GO:0005634 GO:GO:0051726 Gene3D:1.10.472.10
InterPro:IPR013763 SUPFAM:SSF47954 GeneTree:ENSGT00530000063235
InterPro:IPR024599 Pfam:PF11934 EMBL:AADN02038292 EMBL:AADN02038287
EMBL:AADN02038288 EMBL:AADN02038289 EMBL:AADN02038290
EMBL:AADN02038291 IPI:IPI00820273 Ensembl:ENSGALT00000039692
Uniprot:F1NEZ1
Length = 1120
Score = 270 (100.1 bits), Expect = 4.5e-20, P = 4.5e-20
Identities = 100/329 (30%), Positives = 157/329 (47%)
Query: 31 TPVRTAQNTASNWLKTVIAPLPSKPSAELEKFLSLGSVSIANEVESGANIVLEAIFPSIK 90
TPV A + S L T++A L + PS LE+ S + + S + E S++
Sbjct: 416 TPVSIATYSLSR-LHTMLAGLKNAPSENLEQIFRACSRDPSQSIASRVKEMYEVYCQSMQ 474
Query: 91 LGERLFNWSLLNVNLMDSLWSGQERTEALKLYYKVLESICASEAGKSSSRDLSGLLTNEK 150
E N S D R E L YYKVLES+ E + DLS +L +
Sbjct: 475 AEEEFSNLS------KDVASKHFRRAEVL--YYKVLESVIEQERRRLGDTDLSAVLEQDV 526
Query: 151 FHRCMLACSAELVSMARTRVSILFPLILERAGITAFDMCKVTESFIRHEDSLPRELMRHL 210
FHR +LAC E+V+ ++ FP I E I + KV E FIR ED L RE+++HL
Sbjct: 527 FHRSLLACCLEIVTFTY-KLPGSFPFITEIFDIPVYHFYKVIEVFIRAEDGLCREVVKHL 585
Query: 211 NSLEETMLESMVWEKGSSLYNSL------IAS-----RPDLQEEIKRLKLLAEPM-PS-L 257
N +EE +LESM W++ S L++ + + S P E ++ P+ P L
Sbjct: 586 NHIEEQILESMAWKQESILWDRIRDNDNKVPSCEEVMPPQYFERSAANSVVGSPLTPRRL 645
Query: 258 HEI-SMNNHLASGVLAYQHNLH-KHKPSTGNNGMKRLCDENGSKLTKHNSYATAMKVDS- 314
+E+ + + L G+ + L+ ++ T + +RL +N + T N T ++V
Sbjct: 646 NEVRAESGGLGKGISSSPTTLYDRYSSPTAHPTRRRLFVDNDN--TSDNG--TPVRVSQQ 701
Query: 315 PVVDSHQVKLQPVTPSSQTAFMSPVQSKT 343
PVV++ V +Q V P + + ++PV +T
Sbjct: 702 PVVNT--VPVQNVNPEAVS--VTPVPGQT 726
>UNIPROTKB|B7Z913 [details] [associations]
symbol:RBL2 "cDNA FLJ53278, highly similar to
Retinoblastoma-like protein 2" species:9606 "Homo sapiens"
[GO:0005634 "nucleus" evidence=IEA] [GO:0051726 "regulation of cell
cycle" evidence=IEA] InterPro:IPR002720 Pfam:PF01858 GO:GO:0005634
GO:GO:0051726 Gene3D:1.10.472.10 InterPro:IPR013763 SUPFAM:SSF47954
UniGene:Hs.513609 HGNC:HGNC:9894 ChiTaRS:RBL2 EMBL:AC007342
EMBL:AK304283 IPI:IPI00922321 SMR:B7Z913 STRING:B7Z913
Ensembl:ENST00000544545 UCSC:uc010vgw.2 Uniprot:B7Z913
Length = 518
Score = 238 (88.8 bits), Expect = 1.2e-16, Sum P(2) = 1.2e-16
Identities = 67/203 (33%), Positives = 102/203 (50%)
Query: 31 TPVRTAQNTASNWLKTVIAPLPSKPSAELEKFLSLGSVSIANEVESGANIVLEAIFPSIK 90
TPV TA ++ S L T++ L + PS +LE+ L S + + + E +
Sbjct: 201 TPVSTATHSLSR-LHTMLTGLRNAPSEKLEQILRTCSRDPTQAIANRLKEMFEIYSQHFQ 259
Query: 91 LGERLFNWSLLNVNLMDSLWSGQERTEALKLYYKVLESICASEAGKSSSRDLSGLLTNEK 150
E ++S N + S R + LYYKVLES+ E + DLSG+L +
Sbjct: 260 PDE---DFS----NCAKEIASKHFRFAEM-LYYKVLESVIEQEQKRLGDMDLSGILEQDA 311
Query: 151 FHRCMLACSAELVSMARTRVSILFPLILERAGITAFDMCKVTESFIRHEDSLPRELMRHL 210
FHR +LAC E+V+ + FP I E + + KV E FIR ED L RE+++HL
Sbjct: 312 FHRSLLACCLEVVTFSYKPPGN-FPFITEIFDVPLYHFYKVIEVFIRAEDGLCREVVKHL 370
Query: 211 NSLEETMLESMVWEKGSSLYNSL 233
N +EE +L+ + W+ S L+ +
Sbjct: 371 NQIEEQILDHLAWKPESPLWEKI 393
Score = 37 (18.1 bits), Expect = 1.2e-16, Sum P(2) = 1.2e-16
Identities = 7/13 (53%), Positives = 9/13 (69%)
Query: 290 KRLCDENGSKLTK 302
KR+C EN S L +
Sbjct: 494 KRICPENHSALLR 506
>UNIPROTKB|F5H837 [details] [associations]
symbol:RBL2 "Retinoblastoma-like protein 2" species:9606
"Homo sapiens" [GO:0005634 "nucleus" evidence=IEA] [GO:0051726
"regulation of cell cycle" evidence=IEA] InterPro:IPR002720
Pfam:PF01858 GO:GO:0005634 GO:GO:0051726 Gene3D:1.10.472.10
InterPro:IPR013763 SUPFAM:SSF47954 InterPro:IPR024599 Pfam:PF11934
HGNC:HGNC:9894 ChiTaRS:RBL2 EMBL:AC007342 IPI:IPI01011272
Ensembl:ENST00000544405 ArrayExpress:F5H837 Bgee:F5H837
Uniprot:F5H837
Length = 639
Score = 238 (88.8 bits), Expect = 3.0e-16, Sum P(2) = 3.0e-16
Identities = 67/203 (33%), Positives = 102/203 (50%)
Query: 31 TPVRTAQNTASNWLKTVIAPLPSKPSAELEKFLSLGSVSIANEVESGANIVLEAIFPSIK 90
TPV TA ++ S L T++ L + PS +LE+ L S + + + E +
Sbjct: 343 TPVSTATHSLSR-LHTMLTGLRNAPSEKLEQILRTCSRDPTQAIANRLKEMFEIYSQHFQ 401
Query: 91 LGERLFNWSLLNVNLMDSLWSGQERTEALKLYYKVLESICASEAGKSSSRDLSGLLTNEK 150
E ++S N + S R + LYYKVLES+ E + DLSG+L +
Sbjct: 402 PDE---DFS----NCAKEIASKHFRFAEM-LYYKVLESVIEQEQKRLGDMDLSGILEQDA 453
Query: 151 FHRCMLACSAELVSMARTRVSILFPLILERAGITAFDMCKVTESFIRHEDSLPRELMRHL 210
FHR +LAC E+V+ + FP I E + + KV E FIR ED L RE+++HL
Sbjct: 454 FHRSLLACCLEVVTFSYKPPGN-FPFITEIFDVPLYHFYKVIEVFIRAEDGLCREVVKHL 512
Query: 211 NSLEETMLESMVWEKGSSLYNSL 233
N +EE +L+ + W+ S L+ +
Sbjct: 513 NQIEEQILDHLAWKPESPLWEKI 535
Score = 37 (18.1 bits), Expect = 3.0e-16, Sum P(2) = 3.0e-16
Identities = 8/20 (40%), Positives = 12/20 (60%)
Query: 329 PSSQTAFMSPVQSKTPKDGG 348
P+S T V++ +P DGG
Sbjct: 600 PASTTRRRLFVENDSPSDGG 619
>FB|FBgn0015799 [details] [associations]
symbol:Rbf "Retinoblastoma-family protein" species:7227
"Drosophila melanogaster" [GO:0035189 "Rb-E2F complex"
evidence=IDA;TAS] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IGI;IMP;IDA] [GO:0008134
"transcription factor binding" evidence=IPI] [GO:0051101
"regulation of DNA binding" evidence=IDA] [GO:0051726 "regulation
of cell cycle" evidence=ISS;IMP] [GO:0000080 "G1 phase of mitotic
cell cycle" evidence=IMP] [GO:0008156 "negative regulation of DNA
replication" evidence=IMP] [GO:0008285 "negative regulation of cell
proliferation" evidence=NAS] [GO:0005634 "nucleus"
evidence=IDA;NAS] [GO:0003677 "DNA binding" evidence=NAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0007307 "eggshell
chorion gene amplification" evidence=TAS] [GO:0007113 "endomitotic
cell cycle" evidence=TAS] [GO:0042023 "DNA endoreduplication"
evidence=IMP] [GO:0031523 "Myb complex" evidence=IDA] [GO:0000785
"chromatin" evidence=IDA] [GO:0045749 "negative regulation of S
phase of mitotic cell cycle" evidence=IMP] [GO:0044212
"transcription regulatory region DNA binding" evidence=IDA]
[GO:0010629 "negative regulation of gene expression" evidence=IMP]
[GO:0008630 "intrinsic apoptotic signaling pathway in response to
DNA damage" evidence=IMP] [GO:0043066 "negative regulation of
apoptotic process" evidence=IMP] [GO:0042127 "regulation of cell
proliferation" evidence=IMP] [GO:0007095 "mitotic G2 DNA damage
checkpoint" evidence=IGI] InterPro:IPR002719 InterPro:IPR002720
Pfam:PF01857 Pfam:PF01858 GO:GO:0007095 GO:GO:0043066 GO:GO:0008630
GO:GO:0008285 EMBL:AE014298 GO:GO:0000785 GO:GO:0006351
GO:GO:0000122 GO:GO:0044212 GO:GO:0045749 GO:GO:0007113
Gene3D:1.10.472.10 InterPro:IPR013763 SMART:SM00385 SUPFAM:SSF47954
GO:GO:0000080 GO:GO:0008156 GO:GO:0051101 GO:GO:0042023
GO:GO:0031523 GO:GO:0007307 GO:GO:0071922 GO:GO:0035189
GO:GO:0034088 Reactome:REACT_118133 EMBL:AL031583 ChiTaRS:Rb97D
EMBL:AY047549 EMBL:AY089532 EMBL:X96975 PIR:T13480
RefSeq:NP_525036.2 UniGene:Dm.4654 ProteinModelPortal:Q24472
SMR:Q24472 IntAct:Q24472 STRING:Q24472 PaxDb:Q24472
EnsemblMetazoa:FBtr0070146 GeneID:31027 KEGG:dme:Dmel_CG7413
CTD:31027 FlyBase:FBgn0015799 eggNOG:NOG296920
GeneTree:ENSGT00530000063235 InParanoid:Q24472 KO:K04681
OMA:CCIDLIY OrthoDB:EOG47D7X2 PhylomeDB:Q24472 GenomeRNAi:31027
NextBio:771579 Bgee:Q24472 GermOnline:CG7413 InterPro:IPR024599
Pfam:PF11934 Uniprot:Q24472
Length = 845
Score = 168 (64.2 bits), Expect = 9.5e-15, Sum P(2) = 9.5e-15
Identities = 43/126 (34%), Positives = 69/126 (54%)
Query: 118 ALKLYYKVLESICASEAGKSSSRDLSGLLTNEK----FHRCMLACSAELVSMARTRVSIL 173
A ++ +L+ I +E DL LL + F+ ++AC ELV A + +
Sbjct: 439 AKSFFFYLLDQILQAEIRNKPDIDLKRLLVQKVSLVIFNITLMACCVELVLEAY-KTELK 497
Query: 174 FPLILERAGITAFDMCKVTESFIRH---EDSLPRELMRHLNSLEETMLESMVWEKGSSLY 230
FP +L+ I+AF+ K+ E +RH E L R L++HLNS+EET LE + W + S+++
Sbjct: 498 FPWVLDCFSISAFEFQKIIEIVVRHGSHEGCLNRSLIKHLNSIEETCLERLAWARNSTVW 557
Query: 231 NSLIAS 236
+IAS
Sbjct: 558 E-MIAS 562
Score = 102 (41.0 bits), Expect = 9.5e-15, Sum P(2) = 9.5e-15
Identities = 32/118 (27%), Positives = 55/118 (46%)
Query: 357 FLFNKMTKLGAVRINSMAERLKLSQQIREKTYLLFRQILVEKTYLFFNRHIDLIILCCFC 416
FL K+ LG +RI + L L ++ E + +F + +T L +RH+D I+C
Sbjct: 585 FL-RKVYLLGWLRIQKLCSELSLCEKTPESIWHIFEHSITHETELMKDRHLDQNIMCAIY 643
Query: 417 GVAKINKLK-LKFEEITDNYVKEPQCRSQDFGFVFAGWLSKHKGKNRENYKSIDAFYN 473
++ +++ KF +I Y +PQ + + VF G+ + K I FYN
Sbjct: 644 IYIRVKRMEDPKFSDIMRAYRNQPQAVNSVYREVFID--INEDGEPK--VKDIIHFYN 697
>DICTYBASE|DDB_G0290551 [details] [associations]
symbol:rblA "retinoblastoma-like protein"
species:44689 "Dictyostelium discoideum" [GO:0045165 "cell fate
commitment" evidence=IGI] [GO:0010628 "positive regulation of gene
expression" evidence=IMP] [GO:0051330 "G1 phase of meiotic cell
cycle" evidence=IMP] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IMP]
[GO:0051726 "regulation of cell cycle" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0045786 "negative regulation of cell
cycle" evidence=ISS] [GO:0044212 "transcription regulatory region
DNA binding" evidence=ISS] [GO:0005667 "transcription factor
complex" evidence=ISS] InterPro:IPR002719 InterPro:IPR002720
Pfam:PF01857 Pfam:PF01858 dictyBase:DDB_G0290551
GenomeReviews:CM000154_GR GO:GO:0005667 GO:GO:0000122
Gene3D:1.10.472.10 InterPro:IPR013763 SUPFAM:SSF47954 GO:GO:0045786
EMBL:AAFI02000164 GO:GO:0030332 eggNOG:NOG296920 InterPro:IPR024599
Pfam:PF11934 EMBL:AB211596 RefSeq:XP_635645.1
ProteinModelPortal:Q54FX2 EnsemblProtists:DDB0232004 GeneID:8627717
KEGG:ddi:DDB_G0290551 InParanoid:Q54FX2 OMA:AWCLLEN GO:GO:0051330
Uniprot:Q54FX2
Length = 1312
Score = 160 (61.4 bits), Expect = 1.7e-13, Sum P(2) = 1.7e-13
Identities = 52/222 (23%), Positives = 103/222 (46%)
Query: 19 SQSNGSMAKMTP-TPVRTAQNTASNWLKTVIAPLPS-KPSAELEKFL-SLGSVSIANEVE 75
S S G++ + P TP+ T +WLK I PS L L S +EV+
Sbjct: 615 SLSAGNLGSVIPQTPISLTL-TLESWLKVEIQNYRDPNPSLNLINILKSADQPQQTSEVD 673
Query: 76 SGANIVLEAIFPSIKLGERLFNWSLLNVNLMDSLWSGQ----ERTEALKLYYKVLESICA 131
++E + + LF+ ++ + + + A++LYY +LE +
Sbjct: 674 K----MIERVSSLTNNTDSLFSIGGIDDHQQQQQQQQEVKQRRKNMAIQLYYCLLEKLIK 729
Query: 132 SEAGKSSSRDLSGLLTNEKFHRCMLACSAELVSMARTRVSILFPLILERAGITAFDMCKV 191
E SS+ ++ LL +E FH+ +L+ S E+++ + FP + + F ++
Sbjct: 730 FEQNTSSN--INVLLNHEDFHKSLLSNSFEIIAYVYKMEGLYFPHFINVFKLHPFSYLRL 787
Query: 192 TESFIRHEDSLPRELMRHLNSLEETMLESMVWEKGSSLYNSL 233
+ ++ + LP+ L +H + +EE +LE VW S++++++
Sbjct: 788 IDLVLKVDADLPKLLAQHFSQIEEKILEKYVWSNNSTVFSTI 829
Score = 103 (41.3 bits), Expect = 1.7e-13, Sum P(2) = 1.7e-13
Identities = 21/84 (25%), Positives = 42/84 (50%)
Query: 350 KMDAAVTFLFNKMTKLGAVRINSMAERLKLSQQIREKTYLLFRQILVEKTYLFFNRHIDL 409
K + + K++ L + + + LS + Y + +IL+++T LF NR ID+
Sbjct: 885 KKNPFIQNFIKKVSTLIIAKCRKLIHAMGLSSDYVVQIYQVMIKILIDETLLFKNREIDV 944
Query: 410 IILCCFCGVAKINKLKLKFEEITD 433
+++C + K+N + F+ I D
Sbjct: 945 LLICSIYAICKVNSKNITFKAIID 968
Score = 39 (18.8 bits), Expect = 6.8e-07, Sum P(2) = 6.8e-07
Identities = 17/80 (21%), Positives = 35/80 (43%)
Query: 256 SLHEISMNNHLASGVLAYQHNLHKHKPSTGNNGMKRLCDENGSKLTKHNSYATAMK-VDS 314
S++ + NN+ + +N + + + NN + N S +N+ T K V
Sbjct: 1183 SINNNNNNNNNNNNNNNNNNNNNSNDNNNNNNNNNNNNNNNNSNNNSNNNNNTEKKMVGK 1242
Query: 315 PVVDSHQVKLQPVTPSSQTA 334
++ ++ P TPSS ++
Sbjct: 1243 RLLFDYEES--PSTPSSSSS 1260
>FB|FBgn0038390 [details] [associations]
symbol:Rbf2 "Retinoblastoma-family protein 2" species:7227
"Drosophila melanogaster" [GO:0051726 "regulation of cell cycle"
evidence=ISS] [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISS] [GO:0001078 "RNA polymerase II core
promoter proximal region sequence-specific DNA binding
transcription factor activity involved in negative regulation of
transcription" evidence=IPI] [GO:0035189 "Rb-E2F complex"
evidence=IDA;TAS] [GO:0045749 "negative regulation of S phase of
mitotic cell cycle" evidence=IDA] [GO:0008134 "transcription factor
binding" evidence=IPI] [GO:0031523 "Myb complex" evidence=IDA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IGI] [GO:0044212 "transcription
regulatory region DNA binding" evidence=IDA] InterPro:IPR002719
InterPro:IPR002720 Pfam:PF01857 Pfam:PF01858 EMBL:AE014297
GO:GO:0000122 GO:GO:0044212 GO:GO:0045749 Gene3D:1.10.472.10
InterPro:IPR013763 SUPFAM:SSF47954 GO:GO:0031523 GO:GO:0035189
GeneTree:ENSGT00530000063235 KO:K04681 InterPro:IPR024599
Pfam:PF11934 HSSP:P06400 FlyBase:FBgn0038390 EMBL:AF197059
EMBL:AY071301 RefSeq:NP_524372.1 UniGene:Dm.2418 SMR:Q9VF04
IntAct:Q9VF04 STRING:Q9VF04 EnsemblMetazoa:FBtr0083213 GeneID:41941
KEGG:dme:Dmel_CG5083 UCSC:CG5083-RA CTD:41941 InParanoid:Q9VF04
OMA:ICLRKFY GenomeRNAi:41941 NextBio:826382 Uniprot:Q9VF04
Length = 783
Score = 171 (65.3 bits), Expect = 2.7e-13, Sum P(2) = 2.7e-13
Identities = 42/142 (29%), Positives = 72/142 (50%)
Query: 104 NLMDSLWSGQERTEALKLYYKVLESICASEAGKSSSRDLSGLLTNEKFHRCMLACSAELV 163
+ +D+ SG+ +A LYYK L+ I E + + L+ K +LAC EL
Sbjct: 407 DFLDAELSGKRFRQARGLYYKYLQKILGPELVQKPQLKIGQLMKQRKLTAALLACCLELA 466
Query: 164 SMARTRV--SILFPLILERAGITAFDMCKVTESFIRHEDS-LPRELMRHLNSLEETMLES 220
++ + FP +L + A+D K+ E +R++ L REL++HL+ +EE L+S
Sbjct: 467 LHVHHKLVEGLRFPFVLHCFSLDAYDFQKILELVVRYDHGFLGRELIKHLDVVEEMCLDS 526
Query: 221 MVWEKGSSLYNSLIASRPDLQE 242
+++ K S L+ L P +E
Sbjct: 527 LIFRKSSQLWWELNQRLPRYKE 548
Score = 84 (34.6 bits), Expect = 2.7e-13, Sum P(2) = 2.7e-13
Identities = 22/84 (26%), Positives = 38/84 (45%)
Query: 369 RINSMAERLKLSQQIREKTYLLFRQILVEKTYLFFNRHIDLIILCCFCGVAKINKLKLKF 428
R+ + + L L + +L +E + L NRH+D ++LC ++ KL L F
Sbjct: 577 RLLLLCKSLCLVDSFPQIWHLAEHSFTLESSRLLRNRHLDQLLLCAIHLHVRLEKLHLTF 636
Query: 429 EEITDNYVKEPQCRSQDFGFVFAG 452
I +Y ++P R + V G
Sbjct: 637 SMIIQHYRRQPHFRRSAYREVSLG 660
Score = 37 (18.1 bits), Expect = 1.9e-08, Sum P(2) = 1.9e-08
Identities = 9/16 (56%), Positives = 10/16 (62%)
Query: 235 ASRPDLQEEIKRLKLL 250
AS DL EIKR +L
Sbjct: 760 ASSNDLMREIKRPNIL 775
>WB|WBGene00003020 [details] [associations]
symbol:lin-35 species:6239 "Caenorhabditis elegans"
[GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0051726 "regulation of
cell cycle" evidence=IEA] [GO:0002009 "morphogenesis of an
epithelium" evidence=IMP] [GO:0040010 "positive regulation of
growth rate" evidence=IMP] [GO:0018991 "oviposition" evidence=IMP]
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IGI;IMP] [GO:0040007 "growth" evidence=IMP] [GO:0002119
"nematode larval development" evidence=IGI;IMP] [GO:0000003
"reproduction" evidence=IGI;IMP] [GO:0010171 "body morphogenesis"
evidence=IMP] [GO:0040027 "negative regulation of vulval
development" evidence=IGI;IMP] [GO:0040018 "positive regulation of
multicellular organism growth" evidence=IGI] [GO:0016479 "negative
regulation of transcription from RNA polymerase I promoter"
evidence=ISS] [GO:0048557 "embryonic digestive tract morphogenesis"
evidence=IGI] [GO:0071850 "mitotic cell cycle arrest" evidence=IGI]
InterPro:IPR002719 InterPro:IPR002720 Pfam:PF01857 Pfam:PF01858
GO:GO:0005634 GO:GO:0009792 GO:GO:0002009 GO:GO:0040007
GO:GO:0018991 GO:GO:0040010 GO:GO:0002119 GO:GO:0010171
GO:GO:0040018 Gene3D:1.10.472.10 InterPro:IPR013763 SUPFAM:SSF47954
GO:GO:0040027 GO:GO:0071850 GO:GO:0048557 EMBL:FO080198
GO:GO:0016479 GeneTree:ENSGT00530000063235 KO:K04681
InterPro:IPR024599 Pfam:PF11934 HSSP:P06400 EMBL:AF116529
PIR:T34024 RefSeq:NP_491686.1 UniGene:Cel.5952
ProteinModelPortal:G5EDT1 SMR:G5EDT1 IntAct:G5EDT1
EnsemblMetazoa:C32F10.2 GeneID:172249 KEGG:cel:CELE_C32F10.2
CTD:172249 WormBase:C32F10.2 OMA:PWILNAL NextBio:874671
Uniprot:G5EDT1
Length = 961
Score = 125 (49.1 bits), Expect = 4.5e-12, Sum P(2) = 4.5e-12
Identities = 34/135 (25%), Positives = 64/135 (47%)
Query: 101 LNVNLMDSLWSGQERTEALKLYYKVLESICASEAGKS-SSRDLSGLLTNEKFHRCMLACS 159
+N N+ ++ ++ E + L + +E I +E K DL ++ E+F +
Sbjct: 561 INENIPKYHYNVRKELELVFLIF--MEKIIVAELKKKVREEDLLNVIRREEFLDSVFCFC 618
Query: 160 AELVSMARTRVSILFPLILERAGITAFDMCKVTESFIRHEDSLPRELMRHLNSLEETMLE 219
EL+ + FP E G+ F KV + I HE L R++++H + +EET++E
Sbjct: 619 VELI-LVSNGYDRPFPWSAELCGVHPFMFHKVIDLMITHEKQLSRQMVQHFSRIEETVIE 677
Query: 220 SMVWEKGSSLYNSLI 234
W+ S L+ ++
Sbjct: 678 YFSWKSDSPLWPMVV 692
Score = 123 (48.4 bits), Expect = 4.5e-12, Sum P(2) = 4.5e-12
Identities = 25/82 (30%), Positives = 45/82 (54%)
Query: 358 LFNKMTKLGAVR-INSMAERLKLSQQIREKTYLLFRQILVEKTYLFFNRHIDLIILCCFC 416
+F K T A R + + +R+ + + + + + LF +L T +F +RH+D I+LCC
Sbjct: 747 IFLKRTYFTAARRLQDLTDRVSMGARAKSQCWSLFDYLLRNDTLIFMDRHLDQILLCCVF 806
Query: 417 GVAKINKLKLKFEEITDNYVKE 438
+ KIN+ + F EI Y ++
Sbjct: 807 VIMKINESSMLFTEIMAQYRRQ 828
>UNIPROTKB|G5EDT1 [details] [associations]
symbol:lin-35 "Synthetic multivulva protein LIN-35 Rb"
species:6239 "Caenorhabditis elegans" [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR002719 InterPro:IPR002720 Pfam:PF01857
Pfam:PF01858 GO:GO:0005634 GO:GO:0009792 GO:GO:0002009
GO:GO:0040007 GO:GO:0018991 GO:GO:0040010 GO:GO:0002119
GO:GO:0010171 GO:GO:0040018 Gene3D:1.10.472.10 InterPro:IPR013763
SUPFAM:SSF47954 GO:GO:0040027 GO:GO:0071850 GO:GO:0048557
EMBL:FO080198 GO:GO:0016479 GeneTree:ENSGT00530000063235 KO:K04681
InterPro:IPR024599 Pfam:PF11934 HSSP:P06400 EMBL:AF116529
PIR:T34024 RefSeq:NP_491686.1 UniGene:Cel.5952
ProteinModelPortal:G5EDT1 SMR:G5EDT1 IntAct:G5EDT1
EnsemblMetazoa:C32F10.2 GeneID:172249 KEGG:cel:CELE_C32F10.2
CTD:172249 WormBase:C32F10.2 OMA:PWILNAL NextBio:874671
Uniprot:G5EDT1
Length = 961
Score = 125 (49.1 bits), Expect = 4.5e-12, Sum P(2) = 4.5e-12
Identities = 34/135 (25%), Positives = 64/135 (47%)
Query: 101 LNVNLMDSLWSGQERTEALKLYYKVLESICASEAGKS-SSRDLSGLLTNEKFHRCMLACS 159
+N N+ ++ ++ E + L + +E I +E K DL ++ E+F +
Sbjct: 561 INENIPKYHYNVRKELELVFLIF--MEKIIVAELKKKVREEDLLNVIRREEFLDSVFCFC 618
Query: 160 AELVSMARTRVSILFPLILERAGITAFDMCKVTESFIRHEDSLPRELMRHLNSLEETMLE 219
EL+ + FP E G+ F KV + I HE L R++++H + +EET++E
Sbjct: 619 VELI-LVSNGYDRPFPWSAELCGVHPFMFHKVIDLMITHEKQLSRQMVQHFSRIEETVIE 677
Query: 220 SMVWEKGSSLYNSLI 234
W+ S L+ ++
Sbjct: 678 YFSWKSDSPLWPMVV 692
Score = 123 (48.4 bits), Expect = 4.5e-12, Sum P(2) = 4.5e-12
Identities = 25/82 (30%), Positives = 45/82 (54%)
Query: 358 LFNKMTKLGAVR-INSMAERLKLSQQIREKTYLLFRQILVEKTYLFFNRHIDLIILCCFC 416
+F K T A R + + +R+ + + + + + LF +L T +F +RH+D I+LCC
Sbjct: 747 IFLKRTYFTAARRLQDLTDRVSMGARAKSQCWSLFDYLLRNDTLIFMDRHLDQILLCCVF 806
Query: 417 GVAKINKLKLKFEEITDNYVKE 438
+ KIN+ + F EI Y ++
Sbjct: 807 VIMKINESSMLFTEIMAQYRRQ 828
>ZFIN|ZDB-GENE-040428-1 [details] [associations]
symbol:rb1 "retinoblastoma 1" species:7955 "Danio
rerio" [GO:0051726 "regulation of cell cycle" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0031290 "retinal ganglion
cell axon guidance" evidence=IMP] [GO:0021554 "optic nerve
development" evidence=IMP] [GO:0007601 "visual perception"
evidence=IMP] InterPro:IPR002719 InterPro:IPR002720 Pfam:PF01857
Pfam:PF01858 ZFIN:ZDB-GENE-040428-1 GO:GO:0005634 GO:GO:0051726
Gene3D:1.10.472.10 InterPro:IPR013763 SMART:SM00385 SUPFAM:SSF47954
GO:GO:0031290 GO:GO:0021554 GeneTree:ENSGT00530000063235
InterPro:IPR024599 Pfam:PF11934 InterPro:IPR015030 Pfam:PF08934
EMBL:CU694531 IPI:IPI00501767 Ensembl:ENSDART00000024309
ArrayExpress:F1Q9D6 Bgee:F1Q9D6 Uniprot:F1Q9D6
Length = 903
Score = 142 (55.0 bits), Expect = 6.3e-12, Sum P(2) = 6.3e-12
Identities = 64/256 (25%), Positives = 115/256 (44%)
Query: 31 TPVRTAQNTASNWLKTVIAPLPSKPSAELEKFLSLGSVSIANE----VESGANIVLEAIF 86
TP+R A T+ L+ + +PS+ L + +V + E VE + ++
Sbjct: 359 TPIRAAM-TSIQQLRGDLTSGSDQPSSNLLVYYKNCTVDPSGEIKKRVEELGEVFIQRFA 417
Query: 87 PSIK-----LG-ERLFNWSLLNVNLMDSLWSGQERTEALKLYYKVLESI--------CAS 132
++ LG +R + + L +M+S+ +E+ +++ + K+L + CA
Sbjct: 418 QAVGQHCEGLGRKRFYLGAQLYYKVMESMLKSEEKRLSVQNFSKLLNNAAFHTSLLACAL 477
Query: 133 EAGKSSSRDLSGLLTNEKFHRCMLACSAELVSMARTRVSILFPLILERAGITAFDMCKVT 192
E ++ + L N F R A + + FP IL + AFD KV
Sbjct: 478 EVVIATY--VGSSLKNGGFGRSSGASDS-------VESDLCFPWILSVFQLPAFDFYKVI 528
Query: 193 ESFIRHEDSLPRELMRHLNSLEETMLESMVWEKGSSLYNSLIASRPDLQEEIKRLKLLAE 252
ESFI+ E +L ++++HL E ++ES+ W S L++ L SR + E AE
Sbjct: 529 ESFIKAEPTLKHDMVKHLEQCEHVIMESLAWRADSPLFDLLKQSREEGPGE------QAE 582
Query: 253 PMPSLHEISMNNHLAS 268
P +L++ +NH A+
Sbjct: 583 PPATLNQPLHHNHTAA 598
Score = 103 (41.3 bits), Expect = 6.3e-12, Sum P(2) = 6.3e-12
Identities = 38/166 (22%), Positives = 69/166 (41%)
Query: 312 VDSPVVDSH---QVKLQPVTPSSQTAFMSPVQSKTPKDGGIKMDAAVTFLFNKMTKLGAV 368
++ P+ +H + L PV P Q M + TP + ++ F + K+ ++ +
Sbjct: 587 LNQPLHHNHTAADLYLSPVRPCRQPPVME-AEPPTPGTRAPRSNSLSLF-YKKLYRMAYL 644
Query: 369 RINSMAERLKLSQQIREKTYLLFRQILVEKTY-LFFNRHIDLIILCCFCGVAKINKLKLK 427
R+ + L S E Q ++ Y L +RH+D +I+ + K+ + L+
Sbjct: 645 RLKMLFSNLLTSHPEMEPIIWTLLQHTLQNEYELMRDRHLDQLIMSAMYAICKVKNVDLR 704
Query: 428 FEEITDNYVKEPQCRSQDFGFVFAGWLSKHKGKNRENYKSIDAFYN 473
F+ I Y + P + F V +G+ Y SI FYN
Sbjct: 705 FKTIVTAYKELPNTNQETFKRVLI-----REGQ----YDSIIVFYN 741
>UNIPROTKB|I3LUP8 [details] [associations]
symbol:RBL2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0043550 "regulation of lipid kinase activity"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] [GO:0005667 "transcription factor
complex" evidence=IEA] [GO:0051726 "regulation of cell cycle"
evidence=IEA] InterPro:IPR002719 Pfam:PF01857 GO:GO:0005737
GO:GO:0005730 GO:GO:0005667 GO:GO:0051726 Gene3D:1.10.472.10
InterPro:IPR013763 SMART:SM00385 SUPFAM:SSF47954
GeneTree:ENSGT00530000063235 GO:GO:0043550
Ensembl:ENSSSCT00000026766 OMA:AENDSPS Uniprot:I3LUP8
Length = 411
Score = 161 (61.7 bits), Expect = 9.5e-09, P = 9.5e-09
Identities = 40/148 (27%), Positives = 74/148 (50%)
Query: 321 QVKLQPVTPSSQTAFMS-PVQSKTPKDGGIKMDAAVTFLFNKMTKLGAVRINSMAERLKL 379
QV +Q ++P Q P+ S + + + ++++ F K+ L VR+ + +L +
Sbjct: 75 QVAIQQISPGGQQQKQGLPLTSSSVRP---RKTSSLSLFFRKVYHLAGVRLRDLCAKLDI 131
Query: 380 SQQIREKTYLLFRQILVEKTYLFFNRHIDLIILCCFCGVAKINKLKLKFEEITDNYVKEP 439
S ++R+K + F +++ L +RH+D +++C +AK+ K F+ I Y +P
Sbjct: 132 SDELRKKIWTCFEFSIIQCPELMMDRHLDQLLMCAIYVMAKVTKEDKSFQNIMRCYRTQP 191
Query: 440 QCRSQDFGFVFAGWLSKHKGKNRENYKS 467
Q RSQ V+ L K K K R + S
Sbjct: 192 QARSQ----VYRSVLIKGKRKRRNSGSS 215
>UNIPROTKB|H9KZ60 [details] [associations]
symbol:RBL2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005634 "nucleus" evidence=IEA] [GO:0051726 "regulation
of cell cycle" evidence=IEA] InterPro:IPR002720 Pfam:PF01858
GO:GO:0005634 GO:GO:0051726 Gene3D:1.10.472.10 InterPro:IPR013763
SUPFAM:SSF47954 GeneTree:ENSGT00530000063235 InterPro:IPR024599
Pfam:PF11934 EMBL:AADN02043607 Ensembl:ENSGALT00000005059
Uniprot:H9KZ60
Length = 425
Score = 149 (57.5 bits), Expect = 2.2e-07, P = 2.2e-07
Identities = 51/161 (31%), Positives = 71/161 (44%)
Query: 31 TPVRTAQNTASNWLKTVIAPLPSKPSAELEKFLSLGSVSIANEVESGANIVLEAIFPSIK 90
TPV A + S L T++A L + PS LE+ S + + S + E S++
Sbjct: 272 TPVSIATYSLSR-LHTMLAGLKNAPSENLEQIFRACSRDPSQSIASRVKEMYEVYCQSMQ 330
Query: 91 LGERLFNWSLLNVNLMDSLWSGQERTEALKLYYKVLESICASEAGKSSSRDLSGLLTNEK 150
E N S D R E L YYKVLES+ E + DLS +L +
Sbjct: 331 AEEEFSNLS------KDVASKHFRRAEVL--YYKVLESVIEQERRRLGDTDLSAVLEQDV 382
Query: 151 FHRCMLACSAELVSMARTRVSILFPLILERAGITAFDMCKV 191
FHR +LAC E+V+ ++ FP I E I + KV
Sbjct: 383 FHRSLLACCLEIVTFTY-KLPGSFPFITEIFDIPVYHFYKV 422
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.317 0.130 0.376 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 477 477 0.00079 119 3 11 22 0.40 34
35 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 44
No. of states in DFA: 614 (65 KB)
Total size of DFA: 281 KB (2148 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 45.44u 0.15s 45.59t Elapsed: 00:00:02
Total cpu time: 45.45u 0.15s 45.60t Elapsed: 00:00:02
Start: Sat May 11 13:19:55 2013 End: Sat May 11 13:19:57 2013