BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 011787
(477 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|1DXL|A Chain A, Dihydrolipoamide Dehydrogenase Of Glycine Decarboxylase
From Pisum Sativum
pdb|1DXL|B Chain B, Dihydrolipoamide Dehydrogenase Of Glycine Decarboxylase
From Pisum Sativum
pdb|1DXL|C Chain C, Dihydrolipoamide Dehydrogenase Of Glycine Decarboxylase
From Pisum Sativum
pdb|1DXL|D Chain D, Dihydrolipoamide Dehydrogenase Of Glycine Decarboxylase
From Pisum Sativum
Length = 470
Score = 765 bits (1975), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 382/470 (81%), Positives = 411/470 (87%), Gaps = 30/470 (6%)
Query: 38 ASASDENDXXXXXXXXXXXXAAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSS 97
AS SDEND AAIKAAQLG KTTCIEKRGALGGTCLNVGCIPSKALLHSS
Sbjct: 1 ASGSDENDVVIIGGGPGGYVAAIKAAQLGFKTTCIEKRGALGGTCLNVGCIPSKALLHSS 60
Query: 98 HMYHEAMHSFASHGVKFSSVEVDLPAMMAQKDKAVSNLTRGIEGLFKKNKVTYVKGYGKF 157
HMYHEA HSFA+HGVK S+VE+DL AMM QKDKAVSNLTRGIEGLFKKNKVTYVKGYGKF
Sbjct: 61 HMYHEAKHSFANHGVKVSNVEIDLAAMMGQKDKAVSNLTRGIEGLFKKNKVTYVKGYGKF 120
Query: 158 ISPSEVSVDTIEGGNTVVKGKNIIIATGSDVKSLPGITIDEKRIVSSTGALALNEVPKKL 217
+SPSE+SVDTIEG NTVVKGK+IIIATGSDVKSLPG+TIDEK+IVSSTGALAL+E+PKKL
Sbjct: 121 VSPSEISVDTIEGENTVVKGKHIIIATGSDVKSLPGVTIDEKKIVSSTGALALSEIPKKL 180
Query: 218 VVIGAGYIGLEMGSVWARLGSEVTVVEFAADIVPSMDGEIRKQFQRSLEKQKMKFMLKTK 277
VVIGAGYIGLEMGSVW R+GSEVTVVEFA++IVP+MD EIRKQFQRSLEKQ MKF LKTK
Sbjct: 181 VVIGAGYIGLEMGSVWGRIGSEVTVVEFASEIVPTMDAEIRKQFQRSLEKQGMKFKLKTK 240
Query: 278 VVGVDLSGDGVKLTLEPAAGGEKTILEADVVLVSAGRTPFTAGLGLDKIGVETDKMGRIP 337
VVGVD SGDGVKLT+EP+AGGE+TI+EADVVLVSAGRTPFT+GL LDKIGVETDK+GRI
Sbjct: 241 VVGVDTSGDGVKLTVEPSAGGEQTIIEADVVLVSAGRTPFTSGLNLDKIGVETDKLGRIL 300
Query: 338 VNERFATNIPGVYAIGDVIPGPMLAHKAEEDGVACVEFLAGKHGHVDYDKVPGVVYTHPE 397
VNERF+TN+ GVYAIGDVIPGPMLAHKAEEDGVACVE+LAGK GHVDYDKVPGVVYT+PE
Sbjct: 301 VNERFSTNVSGVYAIGDVIPGPMLAHKAEEDGVACVEYLAGKVGHVDYDKVPGVVYTNPE 360
Query: 398 VASVGKTEEQVKELGVEYRVGKFPFLANSRAKAIDDAEGIVKILAEKETDKILGVHIMAP 457
VASVGKTEEQVKE GVEYRVGKFPF+ANSRAKAID+AEG+VKI+AEKETDKILGVHIMAP
Sbjct: 361 VASVGKTEEQVKETGVEYRVGKFPFMANSRAKAIDNAEGLVKIIAEKETDKILGVHIMAP 420
Query: 458 NAGELIH------------------------------EAAMATHDKPIHI 477
NAGELIH EAAMAT+DKPIHI
Sbjct: 421 NAGELIHEAAIALQYDASSEDIARVCHAHPTMSEAIKEAAMATYDKPIHI 470
>pdb|1ZY8|A Chain A, The Crystal Structure Of Dihydrolipoamide Dehydrogenase
And Dihydrolipoamide Dehydrogenase-Binding Protein
(Didomain) Subcomplex Of Human Pyruvate Dehydrogenase
Complex.
pdb|1ZY8|B Chain B, The Crystal Structure Of Dihydrolipoamide Dehydrogenase
And Dihydrolipoamide Dehydrogenase-Binding Protein
(Didomain) Subcomplex Of Human Pyruvate Dehydrogenase
Complex.
pdb|1ZY8|C Chain C, The Crystal Structure Of Dihydrolipoamide Dehydrogenase
And Dihydrolipoamide Dehydrogenase-Binding Protein
(Didomain) Subcomplex Of Human Pyruvate Dehydrogenase
Complex.
pdb|1ZY8|D Chain D, The Crystal Structure Of Dihydrolipoamide Dehydrogenase
And Dihydrolipoamide Dehydrogenase-Binding Protein
(Didomain) Subcomplex Of Human Pyruvate Dehydrogenase
Complex.
pdb|1ZY8|E Chain E, The Crystal Structure Of Dihydrolipoamide Dehydrogenase
And Dihydrolipoamide Dehydrogenase-Binding Protein
(Didomain) Subcomplex Of Human Pyruvate Dehydrogenase
Complex.
pdb|1ZY8|F Chain F, The Crystal Structure Of Dihydrolipoamide Dehydrogenase
And Dihydrolipoamide Dehydrogenase-Binding Protein
(Didomain) Subcomplex Of Human Pyruvate Dehydrogenase
Complex.
pdb|1ZY8|G Chain G, The Crystal Structure Of Dihydrolipoamide Dehydrogenase
And Dihydrolipoamide Dehydrogenase-Binding Protein
(Didomain) Subcomplex Of Human Pyruvate Dehydrogenase
Complex.
pdb|1ZY8|H Chain H, The Crystal Structure Of Dihydrolipoamide Dehydrogenase
And Dihydrolipoamide Dehydrogenase-Binding Protein
(Didomain) Subcomplex Of Human Pyruvate Dehydrogenase
Complex.
pdb|1ZY8|I Chain I, The Crystal Structure Of Dihydrolipoamide Dehydrogenase
And Dihydrolipoamide Dehydrogenase-Binding Protein
(Didomain) Subcomplex Of Human Pyruvate Dehydrogenase
Complex.
pdb|1ZY8|J Chain J, The Crystal Structure Of Dihydrolipoamide Dehydrogenase
And Dihydrolipoamide Dehydrogenase-Binding Protein
(Didomain) Subcomplex Of Human Pyruvate Dehydrogenase
Complex
Length = 474
Score = 491 bits (1264), Expect = e-139, Method: Compositional matrix adjust.
Identities = 245/415 (59%), Positives = 307/415 (73%), Gaps = 3/415 (0%)
Query: 58 AAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAM-HSFASHGVKFSS 116
AAIKAAQLG KT CIEK LGGTCLNVGCIPSKALL++SH YH A FAS G++ S
Sbjct: 21 AAIKAAQLGFKTVCIEKNETLGGTCLNVGCIPSKALLNNSHYYHMAHGKDFASRGIEMSE 80
Query: 117 VEVDLPAMMAQKDKAVSNLTRGIEGLFKKNKVTYVKGYGKFISPSEVSVDTIEGGNTVVK 176
V ++L MM QK AV LT GI LFK+NKV +V GYGK ++V+ +GG V+
Sbjct: 81 VRLNLDKMMEQKSTAVKALTGGIAHLFKQNKVVHVNGYGKITGKNQVTATKADGGTQVID 140
Query: 177 GKNIIIATGSDVKSLPGITIDEKRIVSSTGALALNEVPKKLVVIGAGYIGLEMGSVWARL 236
KNI+IATGS+V PGITIDE IVSSTGAL+L +VP+K+VVIGAG IG+E+GSVW RL
Sbjct: 141 TKNILIATGSEVTPFPGITIDEDTIVSSTGALSLKKVPEKMVVIGAGVIGVELGSVWQRL 200
Query: 237 GSEVTVVEFAADIVP-SMDGEIRKQFQRSLEKQKMKFMLKTKVVGVDLSGDG-VKLTLEP 294
G++VT VEF + +D EI K FQR L+KQ KF L TKV G DG + +++E
Sbjct: 201 GADVTAVEFLGHVGGVGIDMEISKNFQRILQKQGFKFKLNTKVTGATKKSDGKIDVSIEA 260
Query: 295 AAGGEKTILEADVVLVSAGRTPFTAGLGLDKIGVETDKMGRIPVNERFATNIPGVYAIGD 354
A+GG+ ++ DV+LV GR PFT LGL+++G+E D GRIPVN RF T IP +YAIGD
Sbjct: 261 ASGGKAEVITCDVLLVCIGRRPFTKNLGLEELGIELDPRGRIPVNTRFQTKIPNIYAIGD 320
Query: 355 VIPGPMLAHKAEEDGVACVEFLAGKHGHVDYDKVPGVVYTHPEVASVGKTEEQVKELGVE 414
V+ GPMLAHKAE++G+ CVE +AG H+DY+ VP V+YTHPEVA VGK+EEQ+KE G+E
Sbjct: 321 VVAGPMLAHKAEDEGIICVEGMAGGAVHIDYNCVPSVIYTHPEVAWVGKSEEQLKEEGIE 380
Query: 415 YRVGKFPFLANSRAKAIDDAEGIVKILAEKETDKILGVHIMAPNAGELIHEAAMA 469
Y+VGKFPF ANSRAK D +G+VKIL +K TD++LG HI+ P AGE+++EAA+A
Sbjct: 381 YKVGKFPFAANSRAKTNADTDGMVKILGQKSTDRVLGAHILGPGAGEMVNEAALA 435
>pdb|1ZMC|A Chain A, Crystal Structure Of Human Dihydrolipoamide Dehydrogenase
Complexed To Nad+
pdb|1ZMC|B Chain B, Crystal Structure Of Human Dihydrolipoamide Dehydrogenase
Complexed To Nad+
pdb|1ZMC|C Chain C, Crystal Structure Of Human Dihydrolipoamide Dehydrogenase
Complexed To Nad+
pdb|1ZMC|D Chain D, Crystal Structure Of Human Dihydrolipoamide Dehydrogenase
Complexed To Nad+
pdb|1ZMC|E Chain E, Crystal Structure Of Human Dihydrolipoamide Dehydrogenase
Complexed To Nad+
pdb|1ZMC|F Chain F, Crystal Structure Of Human Dihydrolipoamide Dehydrogenase
Complexed To Nad+
pdb|1ZMC|G Chain G, Crystal Structure Of Human Dihydrolipoamide Dehydrogenase
Complexed To Nad+
pdb|1ZMC|H Chain H, Crystal Structure Of Human Dihydrolipoamide Dehydrogenase
Complexed To Nad+
pdb|1ZMD|A Chain A, Crystal Structure Of Human Dihydrolipoamide Dehydrogenase
Complexed To Nadh
pdb|1ZMD|B Chain B, Crystal Structure Of Human Dihydrolipoamide Dehydrogenase
Complexed To Nadh
pdb|1ZMD|C Chain C, Crystal Structure Of Human Dihydrolipoamide Dehydrogenase
Complexed To Nadh
pdb|1ZMD|D Chain D, Crystal Structure Of Human Dihydrolipoamide Dehydrogenase
Complexed To Nadh
pdb|1ZMD|E Chain E, Crystal Structure Of Human Dihydrolipoamide Dehydrogenase
Complexed To Nadh
pdb|1ZMD|F Chain F, Crystal Structure Of Human Dihydrolipoamide Dehydrogenase
Complexed To Nadh
pdb|1ZMD|G Chain G, Crystal Structure Of Human Dihydrolipoamide Dehydrogenase
Complexed To Nadh
pdb|1ZMD|H Chain H, Crystal Structure Of Human Dihydrolipoamide Dehydrogenase
Complexed To Nadh
pdb|2F5Z|A Chain A, Crystal Structure Of Human Dihydrolipoamide Dehydrogenase
(E3) Complexed To The E3-Binding Domain Of Human E3-
Binding Protein
pdb|2F5Z|B Chain B, Crystal Structure Of Human Dihydrolipoamide Dehydrogenase
(E3) Complexed To The E3-Binding Domain Of Human E3-
Binding Protein
pdb|2F5Z|C Chain C, Crystal Structure Of Human Dihydrolipoamide Dehydrogenase
(E3) Complexed To The E3-Binding Domain Of Human E3-
Binding Protein
pdb|2F5Z|D Chain D, Crystal Structure Of Human Dihydrolipoamide Dehydrogenase
(E3) Complexed To The E3-Binding Domain Of Human E3-
Binding Protein
pdb|2F5Z|E Chain E, Crystal Structure Of Human Dihydrolipoamide Dehydrogenase
(E3) Complexed To The E3-Binding Domain Of Human E3-
Binding Protein
pdb|2F5Z|F Chain F, Crystal Structure Of Human Dihydrolipoamide Dehydrogenase
(E3) Complexed To The E3-Binding Domain Of Human E3-
Binding Protein
pdb|2F5Z|G Chain G, Crystal Structure Of Human Dihydrolipoamide Dehydrogenase
(E3) Complexed To The E3-Binding Domain Of Human E3-
Binding Protein
pdb|2F5Z|H Chain H, Crystal Structure Of Human Dihydrolipoamide Dehydrogenase
(E3) Complexed To The E3-Binding Domain Of Human E3-
Binding Protein
pdb|2F5Z|I Chain I, Crystal Structure Of Human Dihydrolipoamide Dehydrogenase
(E3) Complexed To The E3-Binding Domain Of Human E3-
Binding Protein
pdb|2F5Z|J Chain J, Crystal Structure Of Human Dihydrolipoamide Dehydrogenase
(E3) Complexed To The E3-Binding Domain Of Human E3-
Binding Protein
Length = 474
Score = 491 bits (1263), Expect = e-139, Method: Compositional matrix adjust.
Identities = 245/415 (59%), Positives = 308/415 (74%), Gaps = 3/415 (0%)
Query: 58 AAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHS-FASHGVKFSS 116
AAIKAAQLG KT CIEK LGGTCLNVGCIPSKALL++SH YH A + FAS G++ S
Sbjct: 21 AAIKAAQLGFKTVCIEKNETLGGTCLNVGCIPSKALLNNSHYYHMAHGTDFASRGIEMSE 80
Query: 117 VEVDLPAMMAQKDKAVSNLTRGIEGLFKKNKVTYVKGYGKFISPSEVSVDTIEGGNTVVK 176
V ++L MM QK AV LT GI LFK+NKV +V GYGK ++V+ +GG V+
Sbjct: 81 VRLNLDKMMEQKSTAVKALTGGIAHLFKQNKVVHVNGYGKITGKNQVTATKADGGTQVID 140
Query: 177 GKNIIIATGSDVKSLPGITIDEKRIVSSTGALALNEVPKKLVVIGAGYIGLEMGSVWARL 236
KNI+IATGS+V PGITIDE IVSSTGAL+L +VP+K+VVIGAG IG+E+GSVW RL
Sbjct: 141 TKNILIATGSEVTPFPGITIDEDTIVSSTGALSLKKVPEKMVVIGAGVIGVELGSVWQRL 200
Query: 237 GSEVTVVEFAADIVP-SMDGEIRKQFQRSLEKQKMKFMLKTKVVGVDLSGDG-VKLTLEP 294
G++VT VEF + +D EI K FQR L+KQ KF L TKV G DG + +++E
Sbjct: 201 GADVTAVEFLGHVGGVGIDMEISKNFQRILQKQGFKFKLNTKVTGATKKSDGKIDVSIEA 260
Query: 295 AAGGEKTILEADVVLVSAGRTPFTAGLGLDKIGVETDKMGRIPVNERFATNIPGVYAIGD 354
A+GG+ ++ DV+LV GR PFT LGL+++G+E D GRIPVN RF T IP +YAIGD
Sbjct: 261 ASGGKAEVITCDVLLVCIGRRPFTKNLGLEELGIELDPRGRIPVNTRFQTKIPNIYAIGD 320
Query: 355 VIPGPMLAHKAEEDGVACVEFLAGKHGHVDYDKVPGVVYTHPEVASVGKTEEQVKELGVE 414
V+ GPMLAHKAE++G+ CVE +AG H+DY+ VP V+YTHPEVA VGK+EEQ+KE G+E
Sbjct: 321 VVAGPMLAHKAEDEGIICVEGMAGGAVHIDYNCVPSVIYTHPEVAWVGKSEEQLKEEGIE 380
Query: 415 YRVGKFPFLANSRAKAIDDAEGIVKILAEKETDKILGVHIMAPNAGELIHEAAMA 469
Y+VGKFPF ANSRAK D +G+VKIL +K TD++LG HI+ P AGE+++EAA+A
Sbjct: 381 YKVGKFPFAANSRAKTNADTDGMVKILGQKSTDRVLGAHILGPGAGEMVNEAALA 435
>pdb|3RNM|A Chain A, The Crystal Structure Of The Subunit Binding Of Human
Dihydrolipoamide Transacylase (E2b) Bound To Human
Dihydrolipoamide Dehydrogenase (E3)
pdb|3RNM|B Chain B, The Crystal Structure Of The Subunit Binding Of Human
Dihydrolipoamide Transacylase (E2b) Bound To Human
Dihydrolipoamide Dehydrogenase (E3)
pdb|3RNM|C Chain C, The Crystal Structure Of The Subunit Binding Of Human
Dihydrolipoamide Transacylase (E2b) Bound To Human
Dihydrolipoamide Dehydrogenase (E3)
pdb|3RNM|D Chain D, The Crystal Structure Of The Subunit Binding Of Human
Dihydrolipoamide Transacylase (E2b) Bound To Human
Dihydrolipoamide Dehydrogenase (E3)
Length = 495
Score = 490 bits (1262), Expect = e-139, Method: Compositional matrix adjust.
Identities = 245/415 (59%), Positives = 307/415 (73%), Gaps = 3/415 (0%)
Query: 58 AAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAM-HSFASHGVKFSS 116
AAIKAAQLG KT CIEK LGGTCLNVGCIPSKALL++SH YH A FAS G++ S
Sbjct: 42 AAIKAAQLGFKTVCIEKNETLGGTCLNVGCIPSKALLNNSHYYHMAHGKDFASRGIEMSE 101
Query: 117 VEVDLPAMMAQKDKAVSNLTRGIEGLFKKNKVTYVKGYGKFISPSEVSVDTIEGGNTVVK 176
V ++L MM QK AV LT GI LFK+NKV +V GYGK ++V+ +GG V+
Sbjct: 102 VRLNLDKMMEQKSTAVKALTGGIAHLFKQNKVVHVNGYGKITGKNQVTATKADGGTQVID 161
Query: 177 GKNIIIATGSDVKSLPGITIDEKRIVSSTGALALNEVPKKLVVIGAGYIGLEMGSVWARL 236
KNI+IATGS+V PGITIDE IVSSTGAL+L +VP+K+VVIGAG IG+E+GSVW RL
Sbjct: 162 TKNILIATGSEVTPFPGITIDEDTIVSSTGALSLKKVPEKMVVIGAGVIGVELGSVWQRL 221
Query: 237 GSEVTVVEFAADIVP-SMDGEIRKQFQRSLEKQKMKFMLKTKVVGVDLSGDG-VKLTLEP 294
G++VT VEF + +D EI K FQR L+KQ KF L TKV G DG + +++E
Sbjct: 222 GADVTAVEFLGHVGGVGIDMEISKNFQRILQKQGFKFKLNTKVTGATKKSDGKIDVSIEA 281
Query: 295 AAGGEKTILEADVVLVSAGRTPFTAGLGLDKIGVETDKMGRIPVNERFATNIPGVYAIGD 354
A+GG+ ++ DV+LV GR PFT LGL+++G+E D GRIPVN RF T IP +YAIGD
Sbjct: 282 ASGGKAEVITCDVLLVCIGRRPFTKNLGLEELGIELDPRGRIPVNTRFQTKIPNIYAIGD 341
Query: 355 VIPGPMLAHKAEEDGVACVEFLAGKHGHVDYDKVPGVVYTHPEVASVGKTEEQVKELGVE 414
V+ GPMLAHKAE++G+ CVE +AG H+DY+ VP V+YTHPEVA VGK+EEQ+KE G+E
Sbjct: 342 VVAGPMLAHKAEDEGIICVEGMAGGAVHIDYNCVPSVIYTHPEVAWVGKSEEQLKEEGIE 401
Query: 415 YRVGKFPFLANSRAKAIDDAEGIVKILAEKETDKILGVHIMAPNAGELIHEAAMA 469
Y+VGKFPF ANSRAK D +G+VKIL +K TD++LG HI+ P AGE+++EAA+A
Sbjct: 402 YKVGKFPFAANSRAKTNADTDGMVKILGQKSTDRVLGAHILGPGAGEMVNEAALA 456
>pdb|2QAE|A Chain A, Crystal Structure Analysis Of Trypanosoma Cruzi Lipoamide
Dehydrogenase
pdb|2QAE|B Chain B, Crystal Structure Analysis Of Trypanosoma Cruzi Lipoamide
Dehydrogenase
Length = 468
Score = 456 bits (1174), Expect = e-128, Method: Compositional matrix adjust.
Identities = 237/415 (57%), Positives = 303/415 (73%), Gaps = 4/415 (0%)
Query: 58 AAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSS- 116
A+IKAAQLG+KT C+EKRGALGGTCLNVGCIPSKALLH++H+YH+A +FA +G+
Sbjct: 17 ASIKAAQLGMKTACVEKRGALGGTCLNVGCIPSKALLHATHLYHDAHANFARYGLMGGEG 76
Query: 117 VEVDLPAMMAQKDKAVSNLTRGIEGLFKKNKVTYVKGYGKFISPSEVSVDTIEGGNTVVK 176
V +D M QK++AV LT G+E LFKKNKVTY KG G F + + V+ ++G +++
Sbjct: 77 VTMDSAKMQQQKERAVKGLTGGVEYLFKKNKVTYYKGEGSFETAHSIRVNGLDGKQEMLE 136
Query: 177 GKNIIIATGSDVKSLPGITIDEKRIVSSTGALALNEVPKKLVVIGAGYIGLEMGSVWARL 236
K IIATGS+ LP + DEK ++SSTGALAL VPK +VVIG G IGLE+GSVWARL
Sbjct: 137 TKKTIIATGSEPTELPFLPFDEKVVLSSTGALALPRVPKTMVVIGGGVIGLELGSVWARL 196
Query: 237 GSEVTVVEFAADIVPSMDGEIRKQFQRSLEK-QKMKFMLKTKVVGVDLSGDGVKLTLEPA 295
G+EVTVVEFA P++D ++ +L K +KMKFM TKVVG +GD V L +E
Sbjct: 197 GAEVTVVEFAPRCAPTLDEDVTNALVGALAKNEKMKFMTSTKVVGGTNNGDSVSLEVEGK 256
Query: 296 AGGEKTILEADVVLVSAGRTPFTAGLGLDKIGVETDKMGRIPVNERFATNIPGVYAIGDV 355
G +T+ + +LVS GR PFT GLGLDKI V ++ G + + + F T+IP VYAIGDV
Sbjct: 257 NGKRETVT-CEALLVSVGRRPFTGGLGLDKINVAKNERGFVKIGDHFETSIPDVYAIGDV 315
Query: 356 I-PGPMLAHKAEEDGVACVEFLAGKHGHVDYDKVPGVVYTHPEVASVGKTEEQVKELGVE 414
+ GPMLAHKAE++GVAC E LAGK GHV+Y +P V+YT PEVASVGK+E+++K+ GV
Sbjct: 316 VDKGPMLAHKAEDEGVACAEILAGKPGHVNYGVIPAVIYTMPEVASVGKSEDELKKEGVA 375
Query: 415 YRVGKFPFLANSRAKAIDDAEGIVKILAEKETDKILGVHIMAPNAGELIHEAAMA 469
Y+VGKFPF ANSRAKA+ +G VK+L +K TD+ILGVHI+ AGELI EA +A
Sbjct: 376 YKVGKFPFNANSRAKAVSTEDGFVKVLVDKATDRILGVHIVCTTAGELIGEACLA 430
>pdb|1JEH|A Chain A, Crystal Structure Of Yeast E3, Lipoamide Dehydrogenase
pdb|1JEH|B Chain B, Crystal Structure Of Yeast E3, Lipoamide Dehydrogenase
pdb|1V59|A Chain A, Crystal Structure Of Yeast Lipoamide Dehydrogenase
Complexed With Nad+
pdb|1V59|B Chain B, Crystal Structure Of Yeast Lipoamide Dehydrogenase
Complexed With Nad+
Length = 478
Score = 439 bits (1130), Expect = e-123, Method: Compositional matrix adjust.
Identities = 231/422 (54%), Positives = 305/422 (72%), Gaps = 11/422 (2%)
Query: 58 AAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFAS-HGVKFS- 115
AAIKAAQLG T C+EKRG LGGTCLNVGCIPSKALL++SH++H+ MH+ A G+ +
Sbjct: 20 AAIKAAQLGFNTACVEKRGKLGGTCLNVGCIPSKALLNNSHLFHQ-MHTEAQKRGIDVNG 78
Query: 116 SVEVDLPAMMAQKDKAVSNLTRGIEGLFKKNKVTYVKGYGKFISPSEVSVDTIEGGNTVV 175
+++++ KD AV LT GIE LFKKNKVTY KG G F +++ V ++G V
Sbjct: 79 DIKINVANFQKAKDDAVKQLTGGIELLFKKNKVTYYKGNGSFEDETKIRVTPVDGLEGTV 138
Query: 176 KG------KNIIIATGSDVKSLPGITIDEKRIVSSTGALALNEVPKKLVVIGAGYIGLEM 229
K KNII+ATGS+V PGI IDE++IVSSTGAL+L E+PK+L +IG G IGLEM
Sbjct: 139 KEDHILDVKNIIVATGSEVTPFPGIEIDEEKIVSSTGALSLKEIPKRLTIIGGGIIGLEM 198
Query: 230 GSVWARLGSEVTVVEFAADIVPSMDGEIRKQFQRSLEKQKMKFMLKTKVVGVDLSGDG-- 287
GSV++RLGS+VTVVEF I SMDGE+ K Q+ L+KQ + F L TKV+ + D
Sbjct: 199 GSVYSRLGSKVTVVEFQPQIGASMDGEVAKATQKFLKKQGLDFKLSTKVISAKRNDDKNV 258
Query: 288 VKLTLEPAAGGEKTILEADVVLVSAGRTPFTAGLGLDKIGVETDKMGRIPVNERFATNIP 347
V++ +E ++ LEA+V+LV+ GR P+ AGLG +KIG+E DK GR+ ++++F + P
Sbjct: 259 VEIVVEDTKTNKQENLEAEVLLVAVGRRPYIAGLGAEKIGLEVDKRGRLVIDDQFNSKFP 318
Query: 348 GVYAIGDVIPGPMLAHKAEEDGVACVEFLAGKHGHVDYDKVPGVVYTHPEVASVGKTEEQ 407
+ +GDV GPMLAHKAEE+G+A VE L HGHV+Y+ +P V+Y+HPEVA VGKTEEQ
Sbjct: 319 HIKVVGDVTFGPMLAHKAEEEGIAAVEMLKTGHGHVNYNNIPSVMYSHPEVAWVGKTEEQ 378
Query: 408 VKELGVEYRVGKFPFLANSRAKAIDDAEGIVKILAEKETDKILGVHIMAPNAGELIHEAA 467
+KE G++Y++GKFPF ANSRAK D EG VKIL + +T++ILG HI+ PNAGE+I EA
Sbjct: 379 LKEAGIDYKIGKFPFAANSRAKTNQDTEGFVKILIDSKTERILGAHIIGPNAGEMIAEAG 438
Query: 468 MA 469
+A
Sbjct: 439 LA 440
>pdb|3URH|A Chain A, Crystal Structure Of A Dihydrolipoamide Dehydrogenase From
Sinorhizobium Meliloti 1021
pdb|3URH|B Chain B, Crystal Structure Of A Dihydrolipoamide Dehydrogenase From
Sinorhizobium Meliloti 1021
Length = 491
Score = 439 bits (1129), Expect = e-123, Method: Compositional matrix adjust.
Identities = 231/412 (56%), Positives = 292/412 (70%), Gaps = 2/412 (0%)
Query: 59 AIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSVE 118
AIKAAQLG K +EKR GGTCLNVGCIPSKALLH+S +H+A H + GV+ ++ +
Sbjct: 41 AIKAAQLGXKVAVVEKRSTYGGTCLNVGCIPSKALLHASEXFHQAQHGLEALGVEVANPK 100
Query: 119 VDLPAMMAQKDKAVSNLTRGIEGLFKKNKVTYVKGYGKFISPSEVSVDTIEGGNTVVKGK 178
++L A KD V + G+ LFKKNK+ +G GK + +VSV +G V++ K
Sbjct: 101 LNLQKXXAHKDATVKSNVDGVSFLFKKNKIDGFQGTGKVLGQGKVSVTNEKGEEQVLEAK 160
Query: 179 NIIIATGSDVKSLPGITI--DEKRIVSSTGALALNEVPKKLVVIGAGYIGLEMGSVWARL 236
N++IATGSDV +PG+ + DEK IVSSTGALAL +VP +V+G G IGLE+GSVWARL
Sbjct: 161 NVVIATGSDVAGIPGVEVAFDEKTIVSSTGALALEKVPASXIVVGGGVIGLELGSVWARL 220
Query: 237 GSEVTVVEFAADIVPSMDGEIRKQFQRSLEKQKMKFMLKTKVVGVDLSGDGVKLTLEPAA 296
G++VTVVEF I+ DGE+ KQ QR L KQ + F L KV G SGDG K+T EP
Sbjct: 221 GAKVTVVEFLDTILGGXDGEVAKQLQRXLTKQGIDFKLGAKVTGAVKSGDGAKVTFEPVK 280
Query: 297 GGEKTILEADVVLVSAGRTPFTAGLGLDKIGVETDKMGRIPVNERFATNIPGVYAIGDVI 356
GGE T L+A+VVL++ GR P T GLGL K GV D GR+ ++ F T+I GVYAIGDV+
Sbjct: 281 GGEATTLDAEVVLIATGRKPSTDGLGLAKAGVVLDSRGRVEIDRHFQTSIAGVYAIGDVV 340
Query: 357 PGPMLAHKAEEDGVACVEFLAGKHGHVDYDKVPGVVYTHPEVASVGKTEEQVKELGVEYR 416
GP LAHKAE++GVA E +AG+ GHV+YD +PGVVYT PEVASVGKTEE++K GV Y+
Sbjct: 341 RGPXLAHKAEDEGVAVAEIIAGQAGHVNYDVIPGVVYTQPEVASVGKTEEELKAAGVAYK 400
Query: 417 VGKFPFLANSRAKAIDDAEGIVKILAEKETDKILGVHIMAPNAGELIHEAAM 468
+GKFPF AN RA+A +G VKILA+KETD++LG HI+ AGE IHE A+
Sbjct: 401 IGKFPFTANGRARAXLQTDGFVKILADKETDRVLGGHIIGFGAGEXIHEIAV 452
>pdb|2EQ7|A Chain A, Crystal Structure Of Lipoamide Dehydrogenase From Thermus
Thermophilus Hb8 With Psbdo
pdb|2EQ7|B Chain B, Crystal Structure Of Lipoamide Dehydrogenase From Thermus
Thermophilus Hb8 With Psbdo
pdb|2YQU|A Chain A, Crystal Structures And Evolutionary Relationship Of Two
Different Lipoamide Dehydrogenase(e3s) From Thermus
Thermophilus
pdb|2YQU|B Chain B, Crystal Structures And Evolutionary Relationship Of Two
Different Lipoamide Dehydrogenase(e3s) From Thermus
Thermophilus
Length = 455
Score = 387 bits (995), Expect = e-108, Method: Compositional matrix adjust.
Identities = 203/412 (49%), Positives = 279/412 (67%), Gaps = 10/412 (2%)
Query: 58 AAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSV 117
AAI+AAQLG+K +EK ALGGTCL VGCIPSKALL ++ +EA G K V
Sbjct: 16 AAIRAAQLGMKVGVVEKEKALGGTCLRVGCIPSKALLETTERIYEAKKGLL--GAKVKGV 73
Query: 118 EVDLPAMMAQKDKAVSNLTRGIEGLFKKNKVTYVKGYGKFISPSEVSVDTIEGGNTVVKG 177
E+DLPA+MA KDK V T+G+E LFKKN + +G +F+S +V V+ E G + +
Sbjct: 74 ELDLPALMAHKDKVVQANTQGVEFLFKKNGIARHQGTARFLSERKVLVE--ETGEEL-EA 130
Query: 178 KNIIIATGSDVKSLPGITIDEKRIVSSTGALALNEVPKKLVVIGAGYIGLEMGSVWARLG 237
+ I+IATGS P +D +R+V+ST AL+ EVPK+L+V+G G IGLE+G VW RLG
Sbjct: 131 RYILIATGSAPLIPPWAQVDYERVVTSTEALSFPEVPKRLIVVGGGVIGLELGVVWHRLG 190
Query: 238 SEVTVVEFAADIVPSMDGEIRKQFQRSLEKQKMKFMLKTKVVGVDLSGDGVKLTLEPAAG 297
+EV V+E+ I+P+MD E+ + +R +KQ + +V V G ++ LE G
Sbjct: 191 AEVIVLEYMDRILPTMDLEVSRAAERVFKKQGLTIRTGVRVTAVVPEAKGARVELE---G 247
Query: 298 GEKTILEADVVLVSAGRTPFTAGLGLDKIGVETDKMGRIPVNERFATNIPGVYAIGDVIP 357
GE +LEAD VLV+ GR P+T GL L+ G+ TD+ GRIPV+E T +P +YAIGDV+
Sbjct: 248 GE--VLEADRVLVAVGRRPYTEGLSLENAGLSTDERGRIPVDEHLRTRVPHIYAIGDVVR 305
Query: 358 GPMLAHKAEEDGVACVEFLAGKHGHVDYDKVPGVVYTHPEVASVGKTEEQVKELGVEYRV 417
GPMLAHKA E+G+A VE + GHVDY +P VVYTHPE+A+VG TEE++K G+ Y+V
Sbjct: 306 GPMLAHKASEEGIAAVEHMVRGFGHVDYQAIPSVVYTHPEIAAVGYTEEELKAQGIPYKV 365
Query: 418 GKFPFLANSRAKAIDDAEGIVKILAEKETDKILGVHIMAPNAGELIHEAAMA 469
GKFP+ A+ RA+A+ + EG +K+LA +TD+ILGVH + G+++ EAA+A
Sbjct: 366 GKFPYSASGRARAMGETEGFIKVLAHAKTDRILGVHGIGARVGDVLAEAALA 417
>pdb|1LPF|A Chain A, Three-Dimensional Structure Of Lipoamide Dehydrogenase
From Pseudomonas Fluorescens At 2.8 Angstroms
Resolution. Analysis Of Redox And Thermostability
Properties
pdb|1LPF|B Chain B, Three-Dimensional Structure Of Lipoamide Dehydrogenase
From Pseudomonas Fluorescens At 2.8 Angstroms
Resolution. Analysis Of Redox And Thermostability
Properties
Length = 477
Score = 382 bits (980), Expect = e-106, Method: Compositional matrix adjust.
Identities = 202/417 (48%), Positives = 275/417 (65%), Gaps = 8/417 (1%)
Query: 58 AAIKAAQLGLKTTCIEK------RGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHG 111
AAI+AAQLGLKT CIEK + ALGGTCLNVGCIPSKALL SS+ YHEA +F HG
Sbjct: 18 AAIRAAQLGLKTACIEKYIGKEGKVALGGTCLNVGCIPSKALLDSSYKYHEAKEAFKVHG 77
Query: 112 VKFSSVEVDLPAMMAQKDKAVSNLTRGIEGLFKKNKVTYVKGYGKFISPSEVSVDTIEGG 171
++ V +D+PAM+A+K V NLT GI LFK N VT +G+GK ++ +V V ++G
Sbjct: 78 IEAKGVTIDVPAMVARKANIVKNLTGGIATLFKANGVTSFEGHGKLLANKQVEVTGLDGK 137
Query: 172 NTVVKGKNIIIATGSDVKSLPGITIDEKRIVSSTGALALNEVPKKLVVIGAGYIGLEMGS 231
V++ +N+IIA+GS +P + + IV STGAL VPKKL VIGAG IGLE+GS
Sbjct: 138 TQVLEAENVIIASGSRPVEIPPAPLSDDIIVDSTGALEFQAVPKKLGVIGAGVIGLELGS 197
Query: 232 VWARLGSEVTVVEFAADIVPSMDGEIRKQFQRSLEKQKMKFMLKTKVVGVDLSGDGVKLT 291
VWARLG+EVTV+E +P+ D +I K+ + L KQ + L +V ++ V +T
Sbjct: 198 VWARLGAEVTVLEALDKFLPAADEQIAKEALKVLTKQGLNIRLGARVTASEVKKKQVTVT 257
Query: 292 LEPAAGGEKTILEADVVLVSAGRTPFTAGLGLDKIGVETDKMGRIPVNERFATNIPGVYA 351
A G +K D ++V+ GR P T L GV D+ G I V++ T++PGV+A
Sbjct: 258 FTDANGEQKETF--DKLIVAVGRRPVTTDLLAADSGVTLDERGFIYVDDHCKTSVPGVFA 315
Query: 352 IGDVIPGPMLAHKAEEDGVACVEFLAGKHGHVDYDKVPGVVYTHPEVASVGKTEEQVKEL 411
IGDV+ G MLAHKA E+GV E +AG ++YD +P V+YTHPE+A VGKTE+ +K
Sbjct: 316 IGDVVRGAMLAHKASEEGVMVAERIAGHKAQMNYDLIPSVIYTHPEIAWVGKTEQTLKAE 375
Query: 412 GVEYRVGKFPFLANSRAKAIDDAEGIVKILAEKETDKILGVHIMAPNAGELIHEAAM 468
GVE VG FPF A+ RA A +D G+VK++A+ +TD++LGVH++ P+A EL+ + A+
Sbjct: 376 GVEVNVGTFPFAASGRAMAANDTTGLVKVIADAKTDRVLGVHVIGPSAAELVQQGAI 432
>pdb|3LAD|A Chain A, Refined Crystal Structure Of Lipoamide Dehydrogenase From
Azotobacter Vinelandii At 2.2 Angstroms Resolution. A
Comparison With The Structure Of Glutathione Reductase
pdb|3LAD|B Chain B, Refined Crystal Structure Of Lipoamide Dehydrogenase From
Azotobacter Vinelandii At 2.2 Angstroms Resolution. A
Comparison With The Structure Of Glutathione Reductase
Length = 476
Score = 381 bits (979), Expect = e-106, Method: Compositional matrix adjust.
Identities = 200/418 (47%), Positives = 275/418 (65%), Gaps = 8/418 (1%)
Query: 58 AAIKAAQLGLKTTCIEK------RGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHG 111
AAIK+AQLGLKT IEK + ALGGTCLNVGCIPSKALL SS+ +HEA SF HG
Sbjct: 18 AAIKSAQLGLKTALIEKYKGKEGKTALGGTCLNVGCIPSKALLDSSYKFHEAHESFKLHG 77
Query: 112 VKFSSVEVDLPAMMAQKDKAVSNLTRGIEGLFKKNKVTYVKGYGKFISPSEVSVDTIEGG 171
+ V +D+P M+A+KD+ V NLT G+ L K N VT +G+GK ++ +V V +G
Sbjct: 78 ISTGEVAIDVPTMIARKDQIVRNLTGGVASLIKANGVTLFEGHGKLLAGKKVEVTAADGS 137
Query: 172 NTVVKGKNIIIATGSDVKSLPGITIDEKRIVSSTGALALNEVPKKLVVIGAGYIGLEMGS 231
+ V+ +N+I+A+GS +P +D+ IV STGAL VP KL VIGAG IGLE+GS
Sbjct: 138 SQVLDTENVILASGSKPVEIPPAPVDQDVIVDSTGALDFQNVPGKLGVIGAGVIGLELGS 197
Query: 232 VWARLGSEVTVVEFAADIVPSMDGEIRKQFQRSLEKQKMKFMLKTKVVGVDLSGDGVKLT 291
VWARLG+EVTV+E +P++D ++ K+ Q+ L KQ +K +L +V G ++ V +
Sbjct: 198 VWARLGAEVTVLEAMDKFLPAVDEQVAKEAQKILTKQGLKILLGARVTGTEVKNKQVTVK 257
Query: 292 LEPAAGGEKTILEADVVLVSAGRTPFTAGLGLDKIGVETDKMGRIPVNERFATNIPGVYA 351
A G + D ++V+ GR P T L GV D+ G I V++ AT++PGVYA
Sbjct: 258 FVDAEGEKSQAF--DKLIVAVGRRPVTTDLLAADSGVTLDERGFIYVDDYCATSVPGVYA 315
Query: 352 IGDVIPGPMLAHKAEEDGVACVEFLAGKHGHVDYDKVPGVVYTHPEVASVGKTEEQVKEL 411
IGDV+ G MLAHKA E+GV E +AG ++YD +P V+YTHPE+A VGKTE+ +K
Sbjct: 316 IGDVVRGAMLAHKASEEGVVVAERIAGHKAQMNYDLIPAVIYTHPEIAGVGKTEQALKAE 375
Query: 412 GVEYRVGKFPFLANSRAKAIDDAEGIVKILAEKETDKILGVHIMAPNAGELIHEAAMA 469
GV VG FPF A+ RA A +D G VK++A+ +TD++LGVH++ P+A EL+ + A+A
Sbjct: 376 GVAINVGVFPFAASGRAMAANDTAGFVKVIADAKTDRVLGVHVIGPSAAELVQQGAIA 433
>pdb|1EBD|A Chain A, Dihydrolipoamide Dehydrogenase Complexed With The Binding
Domain Of The Dihydrolipoamide Acetylase
pdb|1EBD|B Chain B, Dihydrolipoamide Dehydrogenase Complexed With The Binding
Domain Of The Dihydrolipoamide Acetylase
Length = 455
Score = 327 bits (837), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 182/412 (44%), Positives = 254/412 (61%), Gaps = 6/412 (1%)
Query: 58 AAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSV 117
AAI+AAQLG K T +EK G LGG CLNVGCIPSKAL+ +SH Y +A HS G+K +V
Sbjct: 18 AAIRAAQLGQKVTIVEK-GNLGGVCLNVGCIPSKALISASHRYEQAKHS-EEMGIKAENV 75
Query: 118 EVDLPAMMAQKDKAVSNLTRGIEGLFKKNKVTYVKGYGKFISPSEVSVDTIEGGNTVVKG 177
+D + K V LT G+EGL K NKV VKG F+ + V V + T
Sbjct: 76 TIDFAKVQEWKASVVKKLTGGVEGLLKGNKVEIVKGEAYFVDANTVRVVNGDSAQTYTF- 134
Query: 178 KNIIIATGSDVKSLPGITIDEKRIVSSTGALALNEVPKKLVVIGAGYIGLEMGSVWARLG 237
KN IIATGS LP RI+ STGAL L EVPK LVVIG GYIG+E+G+ +A G
Sbjct: 135 KNAIIATGSRPIELPNFKFS-NRILDSTGALNLGEVPKSLVVIGGGYIGIELGTAYANFG 193
Query: 238 SEVTVVEFAADIVPSMDGEIRKQFQRSLEKQKMKFMLKTKVVGVDLSGDGVKLTLEPAAG 297
++VT++E A +I+ + ++ ++ L+K+ ++ + G + DGV +T E A
Sbjct: 194 TKVTILEGAGEILSGFEKQMAAIIKKRLKKKGVEVVTNALAKGAEEREDGVTVTYE--AN 251
Query: 298 GEKTILEADVVLVSAGRTPFTAGLGLDKIGVETDKMGRIPVNERFATNIPGVYAIGDVIP 357
GE ++AD VLV+ GR P T LGL++IG++ G I V+++ T++P ++AIGD++P
Sbjct: 252 GETKTIDADYVLVTVGRRPNTDELGLEQIGIKMTNRGLIEVDQQCRTSVPNIFAIGDIVP 311
Query: 358 GPMLAHKAEEDGVACVEFLAGKHGHVDYDKVPGVVYTHPEVASVGKTEEQVKELGVEYRV 417
GP LAHKA +G E +AG VDY +P VV++ PE ASVG E+Q K+ G++
Sbjct: 312 GPALAHKASYEGKVAAEAIAGHPSAVDYVAIPAVVFSDPECASVGYFEQQAKDEGIDVIA 371
Query: 418 GKFPFLANSRAKAIDDAEGIVKILAEKETDKILGVHIMAPNAGELIHEAAMA 469
KFPF AN RA A++D +G +K++ KE I+G I+ PNA ++I E +A
Sbjct: 372 AKFPFAANGRALALNDTDGFLKLVVRKEDGVIIGAQIIGPNASDMIAELGLA 423
>pdb|2EQ6|A Chain A, Crystal Structure Of Lipoamide Dehydrogenase From Thermus
Thermophilus Hb8
pdb|2EQ6|B Chain B, Crystal Structure Of Lipoamide Dehydrogenase From Thermus
Thermophilus Hb8
pdb|2EQ8|A Chain A, Crystal Structure Of Lipoamide Dehydrogenase From Thermus
Thermophilus Hb8 With Psbdp
pdb|2EQ8|B Chain B, Crystal Structure Of Lipoamide Dehydrogenase From Thermus
Thermophilus Hb8 With Psbdp
pdb|2EQ8|D Chain D, Crystal Structure Of Lipoamide Dehydrogenase From Thermus
Thermophilus Hb8 With Psbdp
pdb|2EQ8|E Chain E, Crystal Structure Of Lipoamide Dehydrogenase From Thermus
Thermophilus Hb8 With Psbdp
pdb|2EQ9|A Chain A, Crystal Structure Of Lipoamide Dehydrogenase From Thermus
Thermophilus Hb8 With Psbdb
pdb|2EQ9|B Chain B, Crystal Structure Of Lipoamide Dehydrogenase From Thermus
Thermophilus Hb8 With Psbdb
pdb|2EQ9|D Chain D, Crystal Structure Of Lipoamide Dehydrogenase From Thermus
Thermophilus Hb8 With Psbdb
pdb|2EQ9|E Chain E, Crystal Structure Of Lipoamide Dehydrogenase From Thermus
Thermophilus Hb8 With Psbdb
pdb|2EQ9|G Chain G, Crystal Structure Of Lipoamide Dehydrogenase From Thermus
Thermophilus Hb8 With Psbdb
pdb|2EQ9|H Chain H, Crystal Structure Of Lipoamide Dehydrogenase From Thermus
Thermophilus Hb8 With Psbdb
pdb|2EQ9|J Chain J, Crystal Structure Of Lipoamide Dehydrogenase From Thermus
Thermophilus Hb8 With Psbdb
pdb|2EQ9|K Chain K, Crystal Structure Of Lipoamide Dehydrogenase From Thermus
Thermophilus Hb8 With Psbdb
Length = 464
Score = 320 bits (819), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 192/413 (46%), Positives = 261/413 (63%), Gaps = 11/413 (2%)
Query: 58 AAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSV 117
AAI+AAQLGLK +E G +GG CLNVGCIP+KALLH++ H + G+K +
Sbjct: 21 AAIRAAQLGLKVLAVEA-GEVGGVCLNVGCIPTKALLHAAETLHH-LKVAEGFGLK-AKP 77
Query: 118 EVDLPAMMAQKDKAVSNLTRGIEGLFKKNKVTYVKGYGKFISPSEVSVDTIEGGNTVVKG 177
E+DL + +D+ V LT G+ L K N V ++G+ + + P EV V G
Sbjct: 78 ELDLKKLGGWRDQVVKKLTGGVGTLLKGNGVELLRGFARLVGPKEVEV-----GGERYGA 132
Query: 178 KNIIIATGSDVKSLPGITIDEKRIVSSTGALALNE-VPKKLVVIGAGYIGLEMGSVWARL 236
K++I+ATGS+ L G E + ST AL + E +PK+L+VIG G +GLE+G V+ RL
Sbjct: 133 KSLILATGSEPLELKGFPFGED-VWDSTRALKVEEGLPKRLLVIGGGAVGLELGQVYRRL 191
Query: 237 GSEVTVVEFAADIVPSMDGEIRKQFQRSLEKQKMKFMLKTKVVGVDLSGDGVKLTLEPAA 296
G+EVT++E+ +I+P D E +R+LEK+ ++ KTK VG + DG+ + LEPA
Sbjct: 192 GAEVTLIEYMPEILPQGDPETAALLRRALEKEGIRVRTKTKAVGYEKKKDGLHVRLEPAE 251
Query: 297 GGEKTILEADVVLVSAGRTPFTAGLGLDKIGVETDKMGRIPVNERFATNIPGVYAIGDVI 356
GGE + D VLV+ GR P T GLGL+K GV+ D+ G I VN R T++PGVYAIGD
Sbjct: 252 GGEGEEVVVDKVLVAVGRKPRTEGLGLEKAGVKVDERGFIRVNARMETSVPGVYAIGDAA 311
Query: 357 PGPMLAHKAEEDGVACVEFLAGKHGHVDYDKVPGVVYTHPEVASVGKTEEQVKELGVEYR 416
P+LAHKA +G+ E AGK DY +VP VVYT PE A VG TEE+ K G + +
Sbjct: 312 RPPLLAHKAMREGLIAAENAAGKDSAFDY-QVPSVVYTSPEWAGVGLTEEEAKRAGYKVK 370
Query: 417 VGKFPFLANSRAKAIDDAEGIVKILAEKETDKILGVHIMAPNAGELIHEAAMA 469
VGKFP A+ RA + AEG+VK++ ++ETD +LGV I+ P AGELI EAA+A
Sbjct: 371 VGKFPLAASGRALTLGGAEGMVKVVGDEETDLLLGVFIVGPQAGELIAEAALA 423
>pdb|1BHY|A Chain A, Low Temperature Middle Resolution Structure Of P64k From
Masc Data
Length = 482
Score = 253 bits (646), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 170/418 (40%), Positives = 231/418 (55%), Gaps = 13/418 (3%)
Query: 39 SASDENDXXXXXXXXXXXXAAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSH 98
SA E D AA AA GLK +E+ LGG CLNVGCIPSKALLH++
Sbjct: 2 SADAEYDVVVLGGGPGGYSAAFAAADEGLKVAIVERYKTLGGVCLNVGCIPSKALLHNAA 61
Query: 99 MYHEAMHSFASHGVKFSSVEVDLPAMMAQKDKAVSNLTRGIEGLFKKNKVTYVKGYGKFI 158
+ E H A++G+K+ E+D+ + A KD VS LT G+ G+ K KV ++G G+F+
Sbjct: 62 VIDEVRH-LAANGIKYPEPELDIDMLRAYKDGVVSRLTGGLAGMAKSRKVDVIQGDGQFL 120
Query: 159 SPSEVSV-----DTIE-----GGNTVVKGKNIIIATGSDVKSLPGITIDEKRIVSSTGAL 208
P + V D E G +V KN IIA GS V LP I ++ RI+ S+GAL
Sbjct: 121 DPHHLEVSLTAGDAYEQAAPTGEKKIVAFKNCIIAAGSRVTKLPFIP-EDPRIIDSSGAL 179
Query: 209 ALNEVPKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIVPSMDGEIRKQFQRSLEKQ 268
AL EVP KL++IG G IGLEMG+V++ LGS + VVE ++ D ++ K +Q+ E +
Sbjct: 180 ALKEVPGKLLIIGGGIIGLEMGTVYSTLGSRLDVVEMMDGLMQGADRDLVKVWQKQNEYR 239
Query: 269 KMKFMLKTKVVGVDLSGDGVKLTLEPAAGGEKTILEADVVLVSAGRTPFTAGLGLDKIGV 328
M+ TK V V+ DGV +T E A K D VLV+AGR P + +K GV
Sbjct: 240 FDNIMVNTKTVAVEPKEDGVYVTFE-GANAPKEPQRYDAVLVAAGRAPNGKLISAEKAGV 298
Query: 329 ETDKMGRIPVNERFATNIPGVYAIGDVIPGPMLAHKAEEDGVACVEFLAGKHGHVDYDKV 388
G I V+++ TN+P +YAIGD++ PMLAHKA +G E AG + D +
Sbjct: 299 AVTDRGFIEVDKQMRTNVPHIYAIGDIVGQPMLAHKAVHEGHVAAENCAGHKAYFDARVI 358
Query: 389 PGVVYTHPEVASVGKTEEQVKELGVEYRVGKFPFLANSRAKAIDDAEGIVKILAEKET 446
PGV YT PEVA VG+TE K + FP+ A+ RA A + K++ + ET
Sbjct: 359 PGVAYTSPEVAWVGETELSAKASARKITKANFPWAASGRAIANGCDKPFTKLIFDAET 416
>pdb|1OJT|A Chain A, Structure Of Dihydrolipoamide Dehydrogenase
Length = 482
Score = 253 bits (645), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 170/418 (40%), Positives = 231/418 (55%), Gaps = 13/418 (3%)
Query: 39 SASDENDXXXXXXXXXXXXAAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSH 98
SA E D AA AA GLK +E+ LGG CLNVGCIPSKALLH++
Sbjct: 2 SADAEYDVVVLGGGPGGYSAAFAAADEGLKVAIVERYKTLGGVCLNVGCIPSKALLHNAA 61
Query: 99 MYHEAMHSFASHGVKFSSVEVDLPAMMAQKDKAVSNLTRGIEGLFKKNKVTYVKGYGKFI 158
+ E H A++G+K+ E+D+ + A KD VS LT G+ G+ K KV ++G G+F+
Sbjct: 62 VIDEVRH-LAANGIKYPEPELDIDMLRAYKDGVVSRLTGGLAGMAKSRKVDVIQGDGQFL 120
Query: 159 SPSEVSV-----DTIE-----GGNTVVKGKNIIIATGSDVKSLPGITIDEKRIVSSTGAL 208
P + V D E G +V KN IIA GS V LP I ++ RI+ S+GAL
Sbjct: 121 DPHHLEVSLTAGDAYEQAAPTGEKKIVAFKNCIIAAGSRVTKLPFIP-EDPRIIDSSGAL 179
Query: 209 ALNEVPKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIVPSMDGEIRKQFQRSLEKQ 268
AL EVP KL++IG G IGLEMG+V++ LGS + VVE ++ D ++ K +Q+ E +
Sbjct: 180 ALKEVPGKLLIIGGGIIGLEMGTVYSTLGSRLDVVEMMDGLMQGADRDLVKVWQKQNEYR 239
Query: 269 KMKFMLKTKVVGVDLSGDGVKLTLEPAAGGEKTILEADVVLVSAGRTPFTAGLGLDKIGV 328
M+ TK V V+ DGV +T E A K D VLV+AGR P + +K GV
Sbjct: 240 FDNIMVNTKTVAVEPKEDGVYVTFE-GANAPKEPQRYDAVLVAAGRAPNGKLISAEKAGV 298
Query: 329 ETDKMGRIPVNERFATNIPGVYAIGDVIPGPMLAHKAEEDGVACVEFLAGKHGHVDYDKV 388
G I V+++ TN+P +YAIGD++ PMLAHKA +G E AG + D +
Sbjct: 299 AVTDRGFIEVDKQMRTNVPHIYAIGDIVGQPMLAHKAVHEGHVAAENCAGHKAYFDARVI 358
Query: 389 PGVVYTHPEVASVGKTEEQVKELGVEYRVGKFPFLANSRAKAIDDAEGIVKILAEKET 446
PGV YT PEVA VG+TE K + FP+ A+ RA A + K++ + ET
Sbjct: 359 PGVAYTSPEVAWVGETELSAKASARKITKANFPWAASGRAIANGCDKPFTKLIFDAET 416
>pdb|1LVL|A Chain A, The Refined Structure Of Pseudomonas Putida Lipoamide
Dehydrogenase Complexed With Nad+ At 2.45 Angstroms
Resolution
Length = 458
Score = 249 bits (635), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 154/411 (37%), Positives = 231/411 (56%), Gaps = 23/411 (5%)
Query: 58 AAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEA--MHSFASHGVKFS 115
AAI+A QLG+ T +E + ALGGTCLN+GCIPSKAL+H + +H+A + G+ +
Sbjct: 20 AAIRAGQLGIPTVLVEGQ-ALGGTCLNIGCIPSKALIHVAEQFHQASRFTEPSPLGISVA 78
Query: 116 SVEVDLPAMMAQKDKAVSNLTRGIEGLFKKNKVTYVKGYGKFISPSEVSVDTIEGGNTVV 175
S +D+ +A KD V LT G+ L KK+ V V G+ K + +V VD +
Sbjct: 79 SPRLDIGQSVAWKDGIVDRLTTGVAALLKKHGVKVVHGWAKVLDGKQVEVD-----GQRI 133
Query: 176 KGKNIIIATGSDVKSLPGITIDEKRIVSSTGALALNEVPKKLVVIGAGYIGLEMGSVWAR 235
+ +++++ATGS LP + + ++SST ALA +P+ LVV+G GYIGLE+G + +
Sbjct: 134 QCEHLLLATGSSSVELPMLPLGGP-VISSTEALAPKALPQHLVVVGGGYIGLELGIAYRK 192
Query: 236 LGSEVTVVEFAADIVPSMDGEIRKQFQRSLEKQKMKFMLKTKVVGVD----LSGDGVKLT 291
LG++V+VVE I+P+ D E+ SL+K + L V G + L+ DG
Sbjct: 193 LGAQVSVVEARERILPTYDSELTAPVAESLKKLGIALHLGHSVEGYENGCLLANDG---- 248
Query: 292 LEPAAGGEKTILEADVVLVSAGRTPFTAGLGLDKIGVETDKMGRIPVNERFATNIPGVYA 351
G + LEAD VLV+ GR P T G L+ + ++ + I ++ER T++ V+A
Sbjct: 249 -----KGGQLRLEADRVLVAVGRRPRTKGFNLECLDLKMNGAA-IAIDERCQTSMHNVWA 302
Query: 352 IGDVIPGPMLAHKAEEDGVACVEFLAGKHGHVDYDKVPGVVYTHPEVASVGKTEEQVKEL 411
IGDV PMLAH+A G E +AGK + + V +T PEV VGKT EQ +
Sbjct: 303 IGDVAGEPMLAHRAMAQGEMVAEIIAGKARRFEPAAIAAVCFTDPEVVVVGKTPEQASQQ 362
Query: 412 GVEYRVGKFPFLANSRAKAIDDAEGIVKILAEKETDKILGVHIMAPNAGEL 462
G++ V +FPF AN RA +++ G V+++A ++ ILG + EL
Sbjct: 363 GLDCIVAQFPFAANGRAMSLESKSGFVRVVARRDNHLILGWQAVGVAVSEL 413
>pdb|3II4|A Chain A, Structure Of Mycobacterial Lipoamide Dehydrogenase Bound
To A Triazaspirodimethoxybenzoyl Inhibitor
pdb|3II4|B Chain B, Structure Of Mycobacterial Lipoamide Dehydrogenase Bound
To A Triazaspirodimethoxybenzoyl Inhibitor
Length = 466
Score = 223 bits (567), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 148/414 (35%), Positives = 220/414 (53%), Gaps = 7/414 (1%)
Query: 58 AAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSV 117
AAI+AAQLGL T +E + GG CLNVGCIPSKALL ++ + H + G+ V
Sbjct: 20 AAIRAAQLGLSTAIVEPK-YWGGVCLNVGCIPSKALLRNAELVHIFTKDAKAFGIS-GEV 77
Query: 118 EVDLPAMMAQKDKAVSNLTRGIEGLFKKNKVTYVKGYGKFISPSEVSVDTIEGGNTVVKG 177
D + K G+ L KKNK+T + GYG F + + VD +GG V
Sbjct: 78 TFDYGIAYDRSRKVAEGRVAGVHFLMKKNKITEIHGYGTFADANTLLVDLNDGGTESVTF 137
Query: 178 KNIIIATGSDVKSLPGITIDEKRIVSSTGALALNEVPKKLVVIGAGYIGLEMGSVWARLG 237
N IIATGS + +PG ++ +V+ + E+PK +++ GAG IG+E G V G
Sbjct: 138 DNAIIATGSSTRLVPGTSL-SANVVTYEEQILSRELPKSIIIAGAGAIGMEFGYVLKNYG 196
Query: 238 SEVTVVEFAADIVPSMDGEIRKQFQRSLEKQKMKFMLKTKVVGVDLSGDGVKLTLEPAAG 297
+VT+VEF +P+ D ++ K+ ++ +K + + TKV + G V +T+
Sbjct: 197 VDVTIVEFLPRALPNEDADVSKEIEKQFKKLGVTILTATKVESIADGGSQVTVTVTKDGV 256
Query: 298 GEKTILEADVVLVSAGRTPFTAGLGLDKIGVETDKMGRIPVNERFATNIPGVYAIGDVIP 357
++ L+A+ VL + G P G GLDK GV I V++ TN+ +YAIGDV
Sbjct: 257 AQE--LKAEKVLQAIGFAPNVEGYGLDKAGVALTDRKAIGVDDYMRTNVGHIYAIGDVNG 314
Query: 358 GPMLAHKAEEDGVACVEFLAGKHGHV--DYDKVPGVVYTHPEVASVGKTEEQVKELGVEY 415
LAH AE GV E +AG D+ +P + P VAS G TE+Q + G +
Sbjct: 315 LLQLAHVAEAQGVVAAETIAGAETLTLGDHRMLPRATFCQPNVASFGLTEQQARNEGYDV 374
Query: 416 RVGKFPFLANSRAKAIDDAEGIVKILAEKETDKILGVHIMAPNAGELIHEAAMA 469
V KFPF AN++A + D G VK++A+ + ++LG H++ + EL+ E +A
Sbjct: 375 VVAKFPFTANAKAHGVGDPSGFVKLVADAKHGELLGGHLVGHDVAELLPELTLA 428
>pdb|2A8X|A Chain A, Crystal Structure Of Lipoamide Dehydrogenase From
Mycobacterium Tuberculosis
pdb|2A8X|B Chain B, Crystal Structure Of Lipoamide Dehydrogenase From
Mycobacterium Tuberculosis
Length = 464
Score = 220 bits (560), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 148/414 (35%), Positives = 219/414 (52%), Gaps = 7/414 (1%)
Query: 58 AAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSV 117
AAI+AAQLGL T +E + GG CLNVGCIPSKALL ++ + H + G+ V
Sbjct: 18 AAIRAAQLGLSTAIVEPK-YWGGVCLNVGCIPSKALLRNAELVHIFTKDAKAFGIS-GEV 75
Query: 118 EVDLPAMMAQKDKAVSNLTRGIEGLFKKNKVTYVKGYGKFISPSEVSVDTIEGGNTVVKG 177
D + K G+ L KKNK+T + GYG F + + VD +GG V
Sbjct: 76 TFDYGIAYDRSRKVAEGRVAGVHFLXKKNKITEIHGYGTFADANTLLVDLNDGGTESVTF 135
Query: 178 KNIIIATGSDVKSLPGITIDEKRIVSSTGALALNEVPKKLVVIGAGYIGLEMGSVWARLG 237
N IIATGS + +PG ++ +V+ + E+PK +++ GAG IG E G V G
Sbjct: 136 DNAIIATGSSTRLVPGTSL-SANVVTYEEQILSRELPKSIIIAGAGAIGXEFGYVLKNYG 194
Query: 238 SEVTVVEFAADIVPSMDGEIRKQFQRSLEKQKMKFMLKTKVVGVDLSGDGVKLTLEPAAG 297
+VT+VEF +P+ D ++ K+ ++ +K + + TKV + G V +T+
Sbjct: 195 VDVTIVEFLPRALPNEDADVSKEIEKQFKKLGVTILTATKVESIADGGSQVTVTVTKDGV 254
Query: 298 GEKTILEADVVLVSAGRTPFTAGLGLDKIGVETDKMGRIPVNERFATNIPGVYAIGDVIP 357
++ L+A+ VL + G P G GLDK GV I V++ TN+ +YAIGDV
Sbjct: 255 AQE--LKAEKVLQAIGFAPNVEGYGLDKAGVALTDRKAIGVDDYXRTNVGHIYAIGDVNG 312
Query: 358 GPMLAHKAEEDGVACVEFLAGKHGHV--DYDKVPGVVYTHPEVASVGKTEEQVKELGVEY 415
LAH AE GV E +AG D+ +P + P VAS G TE+Q + G +
Sbjct: 313 LLQLAHVAEAQGVVAAETIAGAETLTLGDHRXLPRATFCQPNVASFGLTEQQARNEGYDV 372
Query: 416 RVGKFPFLANSRAKAIDDAEGIVKILAEKETDKILGVHIMAPNAGELIHEAAMA 469
V KFPF AN++A + D G VK++A+ + ++LG H++ + EL+ E +A
Sbjct: 373 VVAKFPFTANAKAHGVGDPSGFVKLVADAKHGELLGGHLVGHDVAELLPELTLA 426
>pdb|1ZK7|A Chain A, Crystal Structure Of Tn501 Mera
pdb|1ZX9|A Chain A, Crystal Structure Of Tn501 Mera
Length = 467
Score = 189 bits (479), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 137/417 (32%), Positives = 214/417 (51%), Gaps = 24/417 (5%)
Query: 66 GLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSVEVDLPAMM 125
G + T IE RG +GGTC+NVGC+PSK ++ ++H+ H S G+ + +D ++
Sbjct: 27 GAQVTLIE-RGTIGGTCVNVGCVPSKIMIRAAHIAHLRRESPFDGGIAATVPTIDRSKLL 85
Query: 126 AQKDKAVSNLTRG-IEGLFKKNK-VTYVKGYGKFISPSEVSVDTIEGGNTVVKGKNIIIA 183
AQ+ V L EG+ N +T V G +F ++V EGG VV ++A
Sbjct: 86 AQQQARVDELRHAKYEGILGGNPAITVVHGEARFKDDQSLTVRLNEGGERVVMFDRCLVA 145
Query: 184 TGSD--VKSLPGITIDEKRIVSSTGALALNEVPKKLVVIGAGYIGLEMGSVWARLGSEVT 241
TG+ V +PG+ E +ST ALA + +P++L VIG+ + LE+ +ARLGS+VT
Sbjct: 146 TGASPAVPPIPGL--KESPYWTSTEALASDTIPERLAVIGSSVVALELAQAFARLGSKVT 203
Query: 242 VVE-----FAADIVPSMDGEIRKQFQRSLEKQKMKFMLKTKVVGVDLSGDGVKLTLEPAA 296
V+ F D P++ + F R+ + ++ ++V +D G+ V T
Sbjct: 204 VLARNTLFFRED--PAIGEAVTAAF-RAEGIEVLEHTQASQVAHMD--GEFVLTTTH--- 255
Query: 297 GGEKTILEADVVLVSAGRTPFTAGLGLDKIGVETDKMGRIPVNERFATNIPGVYAIGDVI 356
GE L AD +LV+ GRTP T L LD GV + G I +++ T+ P +YA GD
Sbjct: 256 -GE---LRADKLLVATGRTPNTRSLALDAAGVTVNAQGAIVIDQGMRTSNPNIYAAGDCT 311
Query: 357 PGPMLAHKAEEDGVACVEFLAGKHGHVDYDKVPGVVYTHPEVASVGKTEEQVKELGVEYR 416
P + A G + G +D +P VV+T P+VA+VG +E + G+E
Sbjct: 312 DQPQFVYVAAAAGTRAAINMTGGDAALDLTAMPAVVFTDPQVATVGYSEAEAHHDGIETD 371
Query: 417 VGKFPFLANSRAKAIDDAEGIVKILAEKETDKILGVHIMAPNAGELIHEAAMATHDK 473
RA A D G +K++ E+ + +++GV +AP AGELI AA+A ++
Sbjct: 372 SRTLTLDNVPRALANFDTRGFIKLVIEEGSHRLIGVQAVAPEAGELIQTAALAIRNR 428
>pdb|2R9Z|A Chain A, Glutathione Amide Reductase From Chromatium Gracile
pdb|2R9Z|B Chain B, Glutathione Amide Reductase From Chromatium Gracile
pdb|2RAB|A Chain A, Structure Of Glutathione Amide Reductase From Chromatium
Gracile In Complex With Nad
pdb|2RAB|B Chain B, Structure Of Glutathione Amide Reductase From Chromatium
Gracile In Complex With Nad
Length = 463
Score = 186 bits (473), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 130/417 (31%), Positives = 208/417 (49%), Gaps = 22/417 (5%)
Query: 59 AIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSVE 118
A KAA G + IE + ALGGTC+NVGC+P K + ++SH+ EA+ GV+ S
Sbjct: 20 AEKAAAFGKRVALIESK-ALGGTCVNVGCVPKKVMWYASHLA-EAVRDAPGFGVQASGGT 77
Query: 119 VDLPAMMAQKDKAVSNLTRGIEGLFKKNKVTYVKGYGKFISPSEVSVDTIEGGNTVVKGK 178
+D P ++A +D+ + + +G ++ +T V G+ +F V TIE +
Sbjct: 78 LDWPRLVAGRDRYIGAINSFWDGYVERLGITRVDGHARF-----VDAHTIEVEGQRLSAD 132
Query: 179 NIIIATGSD--VKSLPGITIDEKRIVSSTGALALNEVPKKLVVIGAGYIGLEMGSVWARL 236
+I+IATG V LPG + ++S G AL + PK++ +IGAGYIG+E+ +
Sbjct: 133 HIVIATGGRPIVPRLPGAELG----ITSDGFFALQQQPKRVAIIGAGYIGIELAGLLRSF 188
Query: 237 GSEVTVVEFAADIVPSMDGEIRKQFQRSLEKQKMKFMLKTKVVGVDLSGDGVKLTLEPAA 296
GSEVTVV ++ D + ++ Q ++ L+ V ++ G L +
Sbjct: 189 GSEVTVVALEDRLLFQFDPLLSATLAENMHAQGIETHLEFAVAALERDAQGTTLVAQ--- 245
Query: 297 GGEKTILEA-DVVLVSAGRTPFTAGLGLDKIGVETDKMGRIPVNERFATNIPGVYAIGDV 355
+ T LE D V+ + GR P T LGL+ G+E G +P + TN+PGVYA+GD+
Sbjct: 246 --DGTRLEGFDSVIWAVGRAPNTRDLGLEAAGIEVQSNGMVPTDAYQNTNVPGVYALGDI 303
Query: 356 IPGPMLAHKAEEDGVACVE--FLAGKHGHVDYDKVPGVVYTHPEVASVGKTEEQVKE-LG 412
L A G E F +DYD +P VV+ HP ++ VG +E + +E LG
Sbjct: 304 TGRDQLTPVAIAAGRRLAERLFDGQSERKLDYDNIPTVVFAHPPLSKVGLSEPEARERLG 363
Query: 413 VEYRVGKFPFLANSRAKAIDDAEGIVKILAEKETDKILGVHIMAPNAGELIHEAAMA 469
V + F A + +K++ +++GVH++ A E++ A+A
Sbjct: 364 DVLTVYETSFTPMRYALNEHGPKTAMKLVCAGPEQRVVGVHVIGDGADEMLQGFAVA 420
>pdb|3EAN|A Chain A, Crystal Structure Of Recombinant Rat Selenoprotein
Thioredoxin Reductase 1 With Reduced C-Terminal Tail
pdb|3EAN|B Chain B, Crystal Structure Of Recombinant Rat Selenoprotein
Thioredoxin Reductase 1 With Reduced C-Terminal Tail
pdb|3EAN|C Chain C, Crystal Structure Of Recombinant Rat Selenoprotein
Thioredoxin Reductase 1 With Reduced C-Terminal Tail
pdb|3EAN|D Chain D, Crystal Structure Of Recombinant Rat Selenoprotein
Thioredoxin Reductase 1 With Reduced C-Terminal Tail
pdb|3EAN|E Chain E, Crystal Structure Of Recombinant Rat Selenoprotein
Thioredoxin Reductase 1 With Reduced C-Terminal Tail
pdb|3EAN|F Chain F, Crystal Structure Of Recombinant Rat Selenoprotein
Thioredoxin Reductase 1 With Reduced C-Terminal Tail
pdb|3EAO|A Chain A, Crystal Structure Of Recombinant Rat Selenoprotein
Thioredoxin Reductase 1 With Oxidized C-Terminal Tail
pdb|3EAO|B Chain B, Crystal Structure Of Recombinant Rat Selenoprotein
Thioredoxin Reductase 1 With Oxidized C-Terminal Tail
pdb|3EAO|C Chain C, Crystal Structure Of Recombinant Rat Selenoprotein
Thioredoxin Reductase 1 With Oxidized C-Terminal Tail
pdb|3EAO|D Chain D, Crystal Structure Of Recombinant Rat Selenoprotein
Thioredoxin Reductase 1 With Oxidized C-Terminal Tail
pdb|3EAO|E Chain E, Crystal Structure Of Recombinant Rat Selenoprotein
Thioredoxin Reductase 1 With Oxidized C-Terminal Tail
pdb|3EAO|F Chain F, Crystal Structure Of Recombinant Rat Selenoprotein
Thioredoxin Reductase 1 With Oxidized C-Terminal Tail
Length = 499
Score = 172 bits (435), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 125/409 (30%), Positives = 209/409 (51%), Gaps = 19/409 (4%)
Query: 75 RGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKF-SSVEVDLPAMMAQKDKAVS 133
R LGGTC+NVGCIP K L+H + + +A+ ++G K +V+ D M +
Sbjct: 52 RWGLGGTCVNVGCIPKK-LMHQAALLGQALKDSRNYGWKLEDTVKHDWEKMTESVQNHIG 110
Query: 134 NLTRGIEGLFKKNKVTYVKGYGKFISPSEVSVDTIEGGNTVVKGKNIIIATGSDVKSLPG 193
+L G ++ KV Y YGKFI P ++ +G V + +IATG + L G
Sbjct: 111 SLNWGYRVALREKKVVYENAYGKFIGPHKIMATNNKGKEKVYSAERFLIATGERPRYL-G 169
Query: 194 ITIDEKRIVSSTGALALNEVPKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIVPSM 253
I D++ +SS +L P K +V+GA Y+ LE A +G +VTV+ + ++
Sbjct: 170 IPGDKEYCISSDDLFSLPYCPGKTLVVGASYVALECAGFLAGIGLDVTVM-VRSILLRGF 228
Query: 254 DGEIRKQFQRSLEKQKMKFMLK---TKVVGVDLSGDG-VKLTLEPAAGGEKTILEADVVL 309
D ++ + +E+ +KF+ + TK+ ++ G +K+T + E E + VL
Sbjct: 229 DQDMANKIGEHMEEHGIKFIRQFVPTKIEQIEAGTPGRLKVTAKSTNSEETIEDEFNTVL 288
Query: 310 VSAGRTPFTAGLGLDKIGVE-TDKMGRIPVNERFATNIPGVYAIGDVIPGPM-LAHKAEE 367
++ GR T +GL+ +GV+ +K G+IPV + TN+P +YAIGD++ G + L A +
Sbjct: 289 LAVGRDSCTRTIGLETVGVKINEKTGKIPVTDEEQTNVPYIYAIGDILEGKLELTPVAIQ 348
Query: 368 DGVACVEFL-AGKHGHVDYDKVPGVVYTHPEVASVGKTEEQ-VKELGVE----YRVGKFP 421
G + L G DYD VP V+T E G +EE+ V++ G E Y +P
Sbjct: 349 AGRLLAQRLYGGSTVKCDYDNVPTTVFTPLEYGCCGLSEEKAVEKFGEENIEVYHSFFWP 408
Query: 422 FLANSRAKAIDDAEGIVKILAE-KETDKILGVHIMAPNAGELIHEAAMA 469
++ D+ + K++ K+ ++++G H++ PNAGE+ A A
Sbjct: 409 LEWTVPSR--DNNKCYAKVICNLKDNERVVGFHVLGPNAGEVTQGFAAA 455
>pdb|1H6V|A Chain A, Mammalian Thioredoxin Reductase
pdb|1H6V|B Chain B, Mammalian Thioredoxin Reductase
pdb|1H6V|C Chain C, Mammalian Thioredoxin Reductase
pdb|1H6V|D Chain D, Mammalian Thioredoxin Reductase
pdb|1H6V|E Chain E, Mammalian Thioredoxin Reductase
pdb|1H6V|F Chain F, Mammalian Thioredoxin Reductase
Length = 499
Score = 170 bits (430), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 124/406 (30%), Positives = 208/406 (51%), Gaps = 19/406 (4%)
Query: 78 LGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKF-SSVEVDLPAMMAQKDKAVSNLT 136
LGGTC+NVGCIP K L+H + + +A+ ++G K +V+ D M + +L
Sbjct: 55 LGGTCVNVGCIPKK-LMHQAALLGQALKDSRNYGWKLEDTVKHDWEKMTESVQNHIGSLN 113
Query: 137 RGIEGLFKKNKVTYVKGYGKFISPSEVSVDTIEGGNTVVKGKNIIIATGSDVKSLPGITI 196
G ++ KV Y YGKFI P ++ +G V + +IATG + L GI
Sbjct: 114 WGYRVALREKKVVYENAYGKFIGPHKIMATNNKGKEKVYSAERFLIATGERPRYL-GIPG 172
Query: 197 DEKRIVSSTGALALNEVPKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIVPSMDGE 256
D++ +SS +L P K +V+GA Y+ LE A +G +VTV+ + ++ D +
Sbjct: 173 DKEYCISSDDLFSLPYCPGKTLVVGASYVALECAGFLAGIGLDVTVM-VRSILLRGFDQD 231
Query: 257 IRKQFQRSLEKQKMKFMLK---TKVVGVDLSGDG-VKLTLEPAAGGEKTILEADVVLVSA 312
+ + +E+ +KF+ + TK+ ++ G +K+T + E E + VL++
Sbjct: 232 MANKIGEHMEEHGIKFIRQFVPTKIEQIEAGTPGRLKVTAKSTNSEETIEDEFNTVLLAV 291
Query: 313 GRTPFTAGLGLDKIGVE-TDKMGRIPVNERFATNIPGVYAIGDVIPGPM-LAHKAEEDGV 370
GR T +GL+ +GV+ +K G+IPV + TN+P +YAIGD++ G + L A + G
Sbjct: 292 GRDSCTRTIGLETVGVKINEKTGKIPVTDEEQTNVPYIYAIGDILEGKLELTPVAIQAGR 351
Query: 371 ACVEFL-AGKHGHVDYDKVPGVVYTHPEVASVGKTEEQ-VKELGVE----YRVGKFPFLA 424
+ L G DYD VP V+T E G +EE+ V++ G E Y +P
Sbjct: 352 LLAQRLYGGSTVKCDYDNVPTTVFTPLEYGCCGLSEEKAVEKFGEENIEVYHSFFWPLEW 411
Query: 425 NSRAKAIDDAEGIVKILAE-KETDKILGVHIMAPNAGELIHEAAMA 469
++ D+ + K++ K+ ++++G H++ PNAGE+ A A
Sbjct: 412 TVPSR--DNNKCYAKVICNLKDNERVVGFHVLGPNAGEVTQGFAAA 455
>pdb|2GRT|A Chain A, Human Glutathione Reductase A34e, R37w Mutant, Oxidized
Glutathione Complex
pdb|3GRT|A Chain A, Human Glutathione Reductase A34e, R37w Mutant, Oxidized
Trypanothione Complex
pdb|4GRT|A Chain A, Human Glutathione Reductase A34e, R37w Mutant, Mixed
Disulfide Between Trypanothione And The Enzyme
pdb|5GRT|A Chain A, Human Glutathione Reductase A34e, R37w Mutant,
Glutathionylspermidine Complex
Length = 461
Score = 169 bits (429), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 118/425 (27%), Positives = 216/425 (50%), Gaps = 22/425 (5%)
Query: 58 AAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSV 117
+A +AA+LG + +E LGGTC+NVGC+P K + +++ ++ E MH A +G
Sbjct: 18 SAWRAAELGARAAVVESH-KLGGTCVNVGCVPKKVMWNTA-VHSEFMHDHADYGFPSCEG 75
Query: 118 EVDLPAMMAQKDKAVSNLTRGIEGLFKKNKVTYVKGYGKFISPSEVSVDTIEGGNTVVKG 177
+ + + ++D VS L + K+ + ++G+ F S + TIE
Sbjct: 76 KFNWRVIKEKRDAYVSRLNAIYQNNLTKSHIEIIRGHAAFTSDPK---PTIEVSGKKYTA 132
Query: 178 KNIIIATGS-----DVKSLPGITIDEKRIVSSTGALALNEVPKKLVVIGAGYIGLEMGSV 232
+I+IATG +PG ++ ++S G L E+P + V++GAGYI +EM +
Sbjct: 133 PHILIATGGMPSTPHESQIPGASLG----ITSDGFFQLEELPGRSVIVGAGYIAVEMAGI 188
Query: 233 WARLGSEVTVVEFAADIVPSMDGEIRKQFQRSLEKQKMKFMLKTKVVGVDLSGDGVKLTL 292
+ LGS+ +++ ++ S D I LE ++ + ++V V + G+++++
Sbjct: 189 LSALGSKTSLMIRHDKVLRSFDSMISTNCTEELENAGVEVLKFSQVKEVKKTLSGLEVSM 248
Query: 293 EPAAGGEKTIL----EADVVLVSAGRTPFTAGLGLDKIGVETDKMGRIPVNERFATNIPG 348
A G ++ + D +L + GR P T L L+K+G++TD G I V+E TN+ G
Sbjct: 249 VTAVPGRLPVMTMIPDVDCLLWAIGRVPNTKDLSLNKLGIQTDDKGHIIVDEFQNTNVKG 308
Query: 349 VYAIGDVIPGPMLAHKAEEDG--VACVEFLAGKHGHVDYDKVPGVVYTHPEVASVGKTE- 405
+YA+GDV +L A G +A F + +DY+ +P VV++HP + +VG TE
Sbjct: 309 IYAVGDVCGKALLTPVAIAAGRKLAHRLFEYKEDSKLDYNNIPTVVFSHPPIGTVGLTED 368
Query: 406 EQVKELGVE-YRVGKFPFLANSRAKAIDDAEGIVKILAEKETDKILGVHIMAPNAGELIH 464
E + + G+E + F A + ++K++ + +K++G+H+ E++
Sbjct: 369 EAIHKYGIENVKTYSTSFTPMYHAVTKRKTKCVMKMVCANKEEKVVGIHMQGLGCDEMLQ 428
Query: 465 EAAMA 469
A+A
Sbjct: 429 GFAVA 433
>pdb|1GRT|A Chain A, Human Glutathione Reductase A34eR37W MUTANT
Length = 478
Score = 169 bits (428), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 118/425 (27%), Positives = 216/425 (50%), Gaps = 22/425 (5%)
Query: 58 AAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSV 117
+A +AA+LG + +E LGGTC+NVGC+P K + +++ ++ E MH A +G
Sbjct: 35 SAWRAAELGARAAVVESH-KLGGTCVNVGCVPKKVMWNTA-VHSEFMHDHADYGFPSCEG 92
Query: 118 EVDLPAMMAQKDKAVSNLTRGIEGLFKKNKVTYVKGYGKFISPSEVSVDTIEGGNTVVKG 177
+ + + ++D VS L + K+ + ++G+ F S + TIE
Sbjct: 93 KFNWRVIKEKRDAYVSRLNAIYQNNLTKSHIEIIRGHAAFTSDPK---PTIEVSGKKYTA 149
Query: 178 KNIIIATGS-----DVKSLPGITIDEKRIVSSTGALALNEVPKKLVVIGAGYIGLEMGSV 232
+I+IATG +PG ++ ++S G L E+P + V++GAGYI +EM +
Sbjct: 150 PHILIATGGMPSTPHESQIPGASLG----ITSDGFFQLEELPGRSVIVGAGYIAVEMAGI 205
Query: 233 WARLGSEVTVVEFAADIVPSMDGEIRKQFQRSLEKQKMKFMLKTKVVGVDLSGDGVKLTL 292
+ LGS+ +++ ++ S D I LE ++ + ++V V + G+++++
Sbjct: 206 LSALGSKTSLMIRHDKVLRSFDSMISTNCTEELENAGVEVLKFSQVKEVKKTLSGLEVSM 265
Query: 293 EPAAGGEKTIL----EADVVLVSAGRTPFTAGLGLDKIGVETDKMGRIPVNERFATNIPG 348
A G ++ + D +L + GR P T L L+K+G++TD G I V+E TN+ G
Sbjct: 266 VTAVPGRLPVMTMIPDVDCLLWAIGRVPNTKDLSLNKLGIQTDDKGHIIVDEFQNTNVKG 325
Query: 349 VYAIGDVIPGPMLAHKAEEDG--VACVEFLAGKHGHVDYDKVPGVVYTHPEVASVGKTE- 405
+YA+GDV +L A G +A F + +DY+ +P VV++HP + +VG TE
Sbjct: 326 IYAVGDVCGKALLTPVAIAAGRKLAHRLFEYKEDSKLDYNNIPTVVFSHPPIGTVGLTED 385
Query: 406 EQVKELGVE-YRVGKFPFLANSRAKAIDDAEGIVKILAEKETDKILGVHIMAPNAGELIH 464
E + + G+E + F A + ++K++ + +K++G+H+ E++
Sbjct: 386 EAIHKYGIENVKTYSTSFTPMYHAVTKRKTKCVMKMVCANKEEKVVGIHMQGLGCDEMLQ 445
Query: 465 EAAMA 469
A+A
Sbjct: 446 GFAVA 450
>pdb|3DJG|X Chain X, Catalytic Cycle Of Human Glutathione Reductase Near 1 A
Resolution
Length = 477
Score = 169 bits (427), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 118/425 (27%), Positives = 216/425 (50%), Gaps = 22/425 (5%)
Query: 58 AAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSV 117
+A +AA+LG + +E LGGTC+NVGC+P K + +++ ++ E MH A +G
Sbjct: 34 SARRAAELGARAAVVESH-KLGGTCVNVGCVPKKVMWNTA-VHSEFMHDHADYGFPSCEG 91
Query: 118 EVDLPAMMAQKDKAVSNLTRGIEGLFKKNKVTYVKGYGKFISPSEVSVDTIEGGNTVVKG 177
+ + + ++D VS L + K+ + ++G+ F S + TIE
Sbjct: 92 KFNWRVIKEKRDAYVSRLNAIYQNNLTKSHIEIIRGHAAFTSDPK---PTIEVSGKKYTA 148
Query: 178 KNIIIATG-----SDVKSLPGITIDEKRIVSSTGALALNEVPKKLVVIGAGYIGLEMGSV 232
+I+IATG +PG ++ ++S G L E+P + V++GAGYI +EM +
Sbjct: 149 PHILIATGGMPSTPHESQIPGASLG----ITSDGFFQLEELPGRSVIVGAGYIAVEMAGI 204
Query: 233 WARLGSEVTVVEFAADIVPSMDGEIRKQFQRSLEKQKMKFMLKTKVVGVDLSGDGVKLTL 292
+ LGS+ +++ ++ S D I LE ++ + ++V V + G+++++
Sbjct: 205 LSALGSKTSLMIRHDKVLRSFDSMISTNCTEELENAGVEVLKFSQVKEVKKTLSGLEVSM 264
Query: 293 EPAAGGEKTIL----EADVVLVSAGRTPFTAGLGLDKIGVETDKMGRIPVNERFATNIPG 348
A G ++ + D +L + GR P T L L+K+G++TD G I V+E TN+ G
Sbjct: 265 VTAVPGRLPVMTMIPDVDCLLWAIGRVPNTKDLSLNKLGIQTDDKGHIIVDEFQNTNVKG 324
Query: 349 VYAIGDVIPGPMLAHKAEEDG--VACVEFLAGKHGHVDYDKVPGVVYTHPEVASVGKTE- 405
+YA+GDV +L A G +A F + +DY+ +P VV++HP + +VG TE
Sbjct: 325 IYAVGDVCGKALLTPVAIAAGRKLAHRLFEYKEDSKLDYNNIPTVVFSHPPIGTVGLTED 384
Query: 406 EQVKELGVE-YRVGKFPFLANSRAKAIDDAEGIVKILAEKETDKILGVHIMAPNAGELIH 464
E + + G+E + F A + ++K++ + +K++G+H+ E++
Sbjct: 385 EAIHKYGIENVKTYSTSFTPMYHAVTKRKTKCVMKMVCANKEEKVVGIHMQGLGCDEMLQ 444
Query: 465 EAAMA 469
A+A
Sbjct: 445 GFAVA 449
>pdb|1BWC|A Chain A, Structure Of Human Glutathione Reductase Complexed With
Ajoene Inhibitor And Subversive Substrate
pdb|2GH5|A Chain A, Crystal Structure Of Human Glutathione Reductase Complexed
With A Fluoro-analogue Of The Menadione Derivative M5
pdb|2GH5|B Chain B, Crystal Structure Of Human Glutathione Reductase Complexed
With A Fluoro-analogue Of The Menadione Derivative M5
pdb|1GRA|A Chain A, Substrate Binding And Catalysis By Glutathione Reductase
As Derived From Refined Enzyme: Substrate Crystal
Structures At 2 Angstroms Resolution
pdb|1GRB|A Chain A, Substrate Binding And Catalysis By Glutathione Reductase
As Derived From Refined Enzyme: Substrate Crystal
Structures At 2 Angstroms Resolution
pdb|1GRE|A Chain A, Substrate Binding And Catalysis By Glutathione Reductase
As Derived From Refined Enzyme: Substrate Crystal
Structures At 2 Angstroms Resolution
pdb|1GRF|A Chain A, Substrate Binding And Catalysis By Glutathione Reductase
As Derived From Refined Enzyme: Substrate Crystal
Structures At 2 Angstroms Resolution
pdb|3GRS|A Chain A, Refined Structure Of Glutathione Reductase At 1.54
Angstroms Resolution
pdb|4GR1|A Chain A, The Binding Of The Retro-analogue Of Glutathione Disulfide
To Glutathione Reductase
pdb|3DJJ|A Chain A, Catalytic Cycle Of Human Glutathione Reductase Near 1 A
Resolution
pdb|3DK4|A Chain A, Catalytic Cycle Of Human Glutathione Reductase Near 1 A
Resolution
pdb|3DK8|A Chain A, Catalytic Cycle Of Human Glutathione Reductase Near 1 A
Resolution
pdb|3DK9|A Chain A, Catalytic Cycle Of Human Glutathione Reductase Near 1 A
Resolution
pdb|1GRH|A Chain A, Inhibition Of Human Glutathione Reductase By The
Nitrosourea Drugs 1, 3-Bis(2-Chloroethyl)-1-Nitrosourea
And 1-(2-Chloroethyl)-3-(2- Hydroxyethyl)-1-Nitrosourea
pdb|3SQP|A Chain A, Structure Of Human Glutathione Reductase Complexed With
Pyocyanin, An Agent With Antimalarial Activity
pdb|3SQP|B Chain B, Structure Of Human Glutathione Reductase Complexed With
Pyocyanin, An Agent With Antimalarial Activity
Length = 478
Score = 169 bits (427), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 118/425 (27%), Positives = 216/425 (50%), Gaps = 22/425 (5%)
Query: 58 AAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSV 117
+A +AA+LG + +E LGGTC+NVGC+P K + +++ ++ E MH A +G
Sbjct: 35 SARRAAELGARAAVVESH-KLGGTCVNVGCVPKKVMWNTA-VHSEFMHDHADYGFPSCEG 92
Query: 118 EVDLPAMMAQKDKAVSNLTRGIEGLFKKNKVTYVKGYGKFISPSEVSVDTIEGGNTVVKG 177
+ + + ++D VS L + K+ + ++G+ F S + TIE
Sbjct: 93 KFNWRVIKEKRDAYVSRLNAIYQNNLTKSHIEIIRGHAAFTSDPK---PTIEVSGKKYTA 149
Query: 178 KNIIIATG-----SDVKSLPGITIDEKRIVSSTGALALNEVPKKLVVIGAGYIGLEMGSV 232
+I+IATG +PG ++ ++S G L E+P + V++GAGYI +EM +
Sbjct: 150 PHILIATGGMPSTPHESQIPGASLG----ITSDGFFQLEELPGRSVIVGAGYIAVEMAGI 205
Query: 233 WARLGSEVTVVEFAADIVPSMDGEIRKQFQRSLEKQKMKFMLKTKVVGVDLSGDGVKLTL 292
+ LGS+ +++ ++ S D I LE ++ + ++V V + G+++++
Sbjct: 206 LSALGSKTSLMIRHDKVLRSFDSMISTNCTEELENAGVEVLKFSQVKEVKKTLSGLEVSM 265
Query: 293 EPAAGGEKTIL----EADVVLVSAGRTPFTAGLGLDKIGVETDKMGRIPVNERFATNIPG 348
A G ++ + D +L + GR P T L L+K+G++TD G I V+E TN+ G
Sbjct: 266 VTAVPGRLPVMTMIPDVDCLLWAIGRVPNTKDLSLNKLGIQTDDKGHIIVDEFQNTNVKG 325
Query: 349 VYAIGDVIPGPMLAHKAEEDG--VACVEFLAGKHGHVDYDKVPGVVYTHPEVASVGKTE- 405
+YA+GDV +L A G +A F + +DY+ +P VV++HP + +VG TE
Sbjct: 326 IYAVGDVCGKALLTPVAIAAGRKLAHRLFEYKEDSKLDYNNIPTVVFSHPPIGTVGLTED 385
Query: 406 EQVKELGVE-YRVGKFPFLANSRAKAIDDAEGIVKILAEKETDKILGVHIMAPNAGELIH 464
E + + G+E + F A + ++K++ + +K++G+H+ E++
Sbjct: 386 EAIHKYGIENVKTYSTSFTPMYHAVTKRKTKCVMKMVCANKEEKVVGIHMQGLGCDEMLQ 445
Query: 465 EAAMA 469
A+A
Sbjct: 446 GFAVA 450
>pdb|2AAQ|A Chain A, Crystal Structure Analysis Of The Human Glutahione
Reductase, Complexed With Gopi
Length = 479
Score = 169 bits (427), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 118/425 (27%), Positives = 216/425 (50%), Gaps = 22/425 (5%)
Query: 58 AAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSV 117
+A +AA+LG + +E LGGTC+NVGC+P K + +++ ++ E MH A +G
Sbjct: 36 SARRAAELGARAAVVESH-KLGGTCVNVGCVPKKVMWNTA-VHSEFMHDHADYGFPSCEG 93
Query: 118 EVDLPAMMAQKDKAVSNLTRGIEGLFKKNKVTYVKGYGKFISPSEVSVDTIEGGNTVVKG 177
+ + + ++D VS L + K+ + ++G+ F S + TIE
Sbjct: 94 KFNWRVIKEKRDAYVSRLNAIYQNNLTKSHIEIIRGHAAFTSDPK---PTIEVSGKKYTA 150
Query: 178 KNIIIATG-----SDVKSLPGITIDEKRIVSSTGALALNEVPKKLVVIGAGYIGLEMGSV 232
+I+IATG +PG ++ ++S G L E+P + V++GAGYI +EM +
Sbjct: 151 PHILIATGGMPSTPHESQIPGASLG----ITSDGFFQLEELPGRSVIVGAGYIAVEMAGI 206
Query: 233 WARLGSEVTVVEFAADIVPSMDGEIRKQFQRSLEKQKMKFMLKTKVVGVDLSGDGVKLTL 292
+ LGS+ +++ ++ S D I LE ++ + ++V V + G+++++
Sbjct: 207 LSALGSKTSLMIRHDKVLRSFDSMISTNCTEELENAGVEVLKFSQVKEVKKTLSGLEVSM 266
Query: 293 EPAAGGEKTIL----EADVVLVSAGRTPFTAGLGLDKIGVETDKMGRIPVNERFATNIPG 348
A G ++ + D +L + GR P T L L+K+G++TD G I V+E TN+ G
Sbjct: 267 VTAVPGRLPVMTMIPDVDCLLWAIGRVPNTKDLSLNKLGIQTDDKGHIIVDEFQNTNVKG 326
Query: 349 VYAIGDVIPGPMLAHKAEEDG--VACVEFLAGKHGHVDYDKVPGVVYTHPEVASVGKTE- 405
+YA+GDV +L A G +A F + +DY+ +P VV++HP + +VG TE
Sbjct: 327 IYAVGDVCGKALLTPVAIAAGRKLAHRLFEYKEDSKLDYNNIPTVVFSHPPIGTVGLTED 386
Query: 406 EQVKELGVE-YRVGKFPFLANSRAKAIDDAEGIVKILAEKETDKILGVHIMAPNAGELIH 464
E + + G+E + F A + ++K++ + +K++G+H+ E++
Sbjct: 387 EAIHKYGIENVKTYSTSFTPMYHAVTKRKTKCVMKMVCANKEEKVVGIHMQGLGCDEMLQ 446
Query: 465 EAAMA 469
A+A
Sbjct: 447 GFAVA 451
>pdb|1XAN|A Chain A, Human Glutathione Reductase In Complex With A Xanthene
Inhibitor
Length = 461
Score = 168 bits (426), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 118/425 (27%), Positives = 216/425 (50%), Gaps = 22/425 (5%)
Query: 58 AAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSV 117
+A +AA+LG + +E LGGTC+NVGC+P K + +++ ++ E MH A +G
Sbjct: 18 SARRAAELGARAAVVESH-KLGGTCVNVGCVPKKVMWNTA-VHSEFMHDHADYGFPSCEG 75
Query: 118 EVDLPAMMAQKDKAVSNLTRGIEGLFKKNKVTYVKGYGKFISPSEVSVDTIEGGNTVVKG 177
+ + + ++D VS L + K+ + ++G+ F S + TIE
Sbjct: 76 KFNWRVIKEKRDAYVSRLNAIYQNNLTKSHIEIIRGHAAFTSDPK---PTIEVSGKKYTA 132
Query: 178 KNIIIATG-----SDVKSLPGITIDEKRIVSSTGALALNEVPKKLVVIGAGYIGLEMGSV 232
+I+IATG +PG ++ ++S G L E+P + V++GAGYI +EM +
Sbjct: 133 PHILIATGGMPSTPHESQIPGASLG----ITSDGFFQLEELPGRSVIVGAGYIAVEMAGI 188
Query: 233 WARLGSEVTVVEFAADIVPSMDGEIRKQFQRSLEKQKMKFMLKTKVVGVDLSGDGVKLTL 292
+ LGS+ +++ ++ S D I LE ++ + ++V V + G+++++
Sbjct: 189 LSALGSKTSLMIRHDKVLRSFDSMISTNCTEELENAGVEVLKFSQVKEVKKTLSGLEVSM 248
Query: 293 EPAAGGEKTIL----EADVVLVSAGRTPFTAGLGLDKIGVETDKMGRIPVNERFATNIPG 348
A G ++ + D +L + GR P T L L+K+G++TD G I V+E TN+ G
Sbjct: 249 VTAVPGRLPVMTMIPDVDCLLWAIGRVPNTKDLSLNKLGIQTDDKGHIIVDEFQNTNVKG 308
Query: 349 VYAIGDVIPGPMLAHKAEEDG--VACVEFLAGKHGHVDYDKVPGVVYTHPEVASVGKTE- 405
+YA+GDV +L A G +A F + +DY+ +P VV++HP + +VG TE
Sbjct: 309 IYAVGDVCGKALLTPVAIAAGRKLAHRLFEYKEDSKLDYNNIPTVVFSHPPIGTVGLTED 368
Query: 406 EQVKELGVE-YRVGKFPFLANSRAKAIDDAEGIVKILAEKETDKILGVHIMAPNAGELIH 464
E + + G+E + F A + ++K++ + +K++G+H+ E++
Sbjct: 369 EAIHKYGIENVKTYSTSFTPMYHAVTKRKTKCVMKMVCANKEEKVVGIHMQGLGCDEMLQ 428
Query: 465 EAAMA 469
A+A
Sbjct: 429 GFAVA 433
>pdb|2ZZ0|A Chain A, Crystal Structure Of Human Thioredoxin Reductase I (Secys
498 Cys)
pdb|2ZZ0|B Chain B, Crystal Structure Of Human Thioredoxin Reductase I (Secys
498 Cys)
pdb|2ZZ0|C Chain C, Crystal Structure Of Human Thioredoxin Reductase I (Secys
498 Cys)
pdb|2ZZ0|D Chain D, Crystal Structure Of Human Thioredoxin Reductase I (Secys
498 Cys)
pdb|2ZZB|A Chain A, Crystal Structure Of Human Thioredoxin Reductase I And
Terpyridine Platinum(Ii)
pdb|2ZZB|B Chain B, Crystal Structure Of Human Thioredoxin Reductase I And
Terpyridine Platinum(Ii)
pdb|2ZZB|C Chain C, Crystal Structure Of Human Thioredoxin Reductase I And
Terpyridine Platinum(Ii)
pdb|2ZZB|D Chain D, Crystal Structure Of Human Thioredoxin Reductase I And
Terpyridine Platinum(Ii)
pdb|2ZZC|A Chain A, Crystal Structure Of Nadp(H):human Thioredoxin Reductase I
pdb|2ZZC|B Chain B, Crystal Structure Of Nadp(H):human Thioredoxin Reductase I
pdb|2ZZC|C Chain C, Crystal Structure Of Nadp(H):human Thioredoxin Reductase I
pdb|2ZZC|D Chain D, Crystal Structure Of Nadp(H):human Thioredoxin Reductase I
Length = 513
Score = 165 bits (417), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 126/431 (29%), Positives = 216/431 (50%), Gaps = 27/431 (6%)
Query: 61 KAAQLGLKTTCIE--------KRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGV 112
+AAQ G K ++ R LGGTC+NVGCIP K L+H + + +A+ ++G
Sbjct: 44 EAAQYGKKVMVLDFVTPTPLGTRWGLGGTCVNVGCIPKK-LMHQAALLGQALQDSRNYGW 102
Query: 113 KFS-SVEVDLPAMMAQKDKAVSNLTRGIEGLFKKNKVTYVKGYGKFISPSEVSVDTIEGG 171
K +V+ D M+ + +L G ++ KV Y YG+FI P + +G
Sbjct: 103 KVEETVKHDWDRMIEAVQNHIGSLNWGYRVALREKKVVYENAYGQFIGPHRIKATNNKGK 162
Query: 172 NTVVKGKNIIIATGSDVKSLPGITIDEKRIVSSTGALALNEVPKKLVVIGAGYIGLEMGS 231
+ + +IATG + L GI D++ +SS +L P K +V+GA Y+ LE
Sbjct: 163 EKIYSAERFLIATGERPRYL-GIPGDKEYCISSDDLFSLPYCPGKTLVVGASYVALECAG 221
Query: 232 VWARLGSEVTVVEFAADIVPSMDGEIRKQFQRSLEKQKMKFMLK---TKVVGVDLSGDGV 288
A +G +VTV+ + ++ D ++ + +E+ +KF+ + KV ++ G
Sbjct: 222 FLAGIGLDVTVM-VRSILLRGFDQDMANKIGEHMEEHGIKFIRQFVPIKVEQIEAGTPGR 280
Query: 289 KLTLEPAAGGEKTIL-EADVVLVSAGRTPFTAGLGLDKIGVE-TDKMGRIPVNERFATNI 346
+ + E+ I E + V+++ GR T +GL+ +GV+ +K G+IPV + TN+
Sbjct: 281 LRVVAQSTNSEEIIEGEYNTVMLAIGRDACTRKIGLETVGVKINEKTGKIPVTDEEQTNV 340
Query: 347 PGVYAIGDVIPGPM-LAHKAEEDGVACVEFL-AGKHGHVDYDKVPGVVYTHPEVASVGKT 404
P +YAIGD++ + L A + G + L AG DY+ VP V+T E + G +
Sbjct: 341 PYIYAIGDILEDKVELTPVAIQAGRLLAQRLYAGSTVKCDYENVPTTVFTPLEYGACGLS 400
Query: 405 EEQ-VKELGVE----YRVGKFPFLANSRAKAIDDAEGIVKILAE-KETDKILGVHIMAPN 458
EE+ V++ G E Y +P ++ D+ + KI+ K+ ++++G H++ PN
Sbjct: 401 EEKAVEKFGEENIEVYHSYFWPLEWTIPSR--DNNKCYAKIICNTKDNERVVGFHVLGPN 458
Query: 459 AGELIHEAAMA 469
AGE+ A A
Sbjct: 459 AGEVTQGFAAA 469
>pdb|3QFA|A Chain A, Crystal Structure Of The Human Thioredoxin
Reductase-Thioredoxin Complex
pdb|3QFA|B Chain B, Crystal Structure Of The Human Thioredoxin
Reductase-Thioredoxin Complex
pdb|3QFB|A Chain A, Crystal Structure Of The Human Thioredoxin
Reductase-Thioredoxin Complex
pdb|3QFB|B Chain B, Crystal Structure Of The Human Thioredoxin
Reductase-Thioredoxin Complex
Length = 519
Score = 164 bits (416), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 126/431 (29%), Positives = 216/431 (50%), Gaps = 27/431 (6%)
Query: 61 KAAQLGLKTTCIE--------KRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGV 112
+AAQ G K ++ R LGGTC+NVGCIP K L+H + + +A+ ++G
Sbjct: 50 EAAQYGKKVMVLDFVTPTPLGTRWGLGGTCVNVGCIPKK-LMHQAALLGQALQDSRNYGW 108
Query: 113 KFS-SVEVDLPAMMAQKDKAVSNLTRGIEGLFKKNKVTYVKGYGKFISPSEVSVDTIEGG 171
K +V+ D M+ + +L G ++ KV Y YG+FI P + +G
Sbjct: 109 KVEETVKHDWDRMIEAVQNHIGSLNWGYRVALREKKVVYENAYGQFIGPHRIKATNNKGK 168
Query: 172 NTVVKGKNIIIATGSDVKSLPGITIDEKRIVSSTGALALNEVPKKLVVIGAGYIGLEMGS 231
+ + +IATG + L GI D++ +SS +L P K +V+GA Y+ LE
Sbjct: 169 EKIYSAERFLIATGERPRYL-GIPGDKEYCISSDDLFSLPYCPGKTLVVGASYVALECAG 227
Query: 232 VWARLGSEVTVVEFAADIVPSMDGEIRKQFQRSLEKQKMKFMLK---TKVVGVDLSGDGV 288
A +G +VTV+ + ++ D ++ + +E+ +KF+ + KV ++ G
Sbjct: 228 FLAGIGLDVTVM-VRSILLRGFDQDMANKIGEHMEEHGIKFIRQFVPIKVEQIEAGTPGR 286
Query: 289 KLTLEPAAGGEKTIL-EADVVLVSAGRTPFTAGLGLDKIGVE-TDKMGRIPVNERFATNI 346
+ + E+ I E + V+++ GR T +GL+ +GV+ +K G+IPV + TN+
Sbjct: 287 LRVVAQSTNSEEIIEGEYNTVMLAIGRDACTRKIGLETVGVKINEKTGKIPVTDEEQTNV 346
Query: 347 PGVYAIGDVIPGPM-LAHKAEEDGVACVEFL-AGKHGHVDYDKVPGVVYTHPEVASVGKT 404
P +YAIGD++ + L A + G + L AG DY+ VP V+T E + G +
Sbjct: 347 PYIYAIGDILEDKVELTPVAIQAGRLLAQRLYAGSTVKCDYENVPTTVFTPLEYGACGLS 406
Query: 405 EEQ-VKELGVE----YRVGKFPFLANSRAKAIDDAEGIVKILAE-KETDKILGVHIMAPN 458
EE+ V++ G E Y +P ++ D+ + KI+ K+ ++++G H++ PN
Sbjct: 407 EEKAVEKFGEENIEVYHSYFWPLEWTIPSR--DNNKCYAKIICNTKDNERVVGFHVLGPN 464
Query: 459 AGELIHEAAMA 469
AGE+ A A
Sbjct: 465 AGEVTQGFAAA 475
>pdb|2CFY|A Chain A, Crystal Structure Of Human Thioredoxin Reductase 1
pdb|2CFY|B Chain B, Crystal Structure Of Human Thioredoxin Reductase 1
pdb|2CFY|C Chain C, Crystal Structure Of Human Thioredoxin Reductase 1
pdb|2CFY|D Chain D, Crystal Structure Of Human Thioredoxin Reductase 1
pdb|2CFY|E Chain E, Crystal Structure Of Human Thioredoxin Reductase 1
pdb|2CFY|F Chain F, Crystal Structure Of Human Thioredoxin Reductase 1
Length = 521
Score = 164 bits (416), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 126/431 (29%), Positives = 216/431 (50%), Gaps = 27/431 (6%)
Query: 61 KAAQLGLKTTCIE--------KRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGV 112
+AAQ G K ++ R LGGTC+NVGCIP K L+H + + +A+ ++G
Sbjct: 52 EAAQYGKKVMVLDFVTPTPLGTRWGLGGTCVNVGCIPKK-LMHQAALLGQALQDSRNYGW 110
Query: 113 KFS-SVEVDLPAMMAQKDKAVSNLTRGIEGLFKKNKVTYVKGYGKFISPSEVSVDTIEGG 171
K +V+ D M+ + +L G ++ KV Y YG+FI P + +G
Sbjct: 111 KVEETVKHDWDRMIEAVQNHIGSLNWGYRVALREKKVVYENAYGQFIGPHRIKATNNKGK 170
Query: 172 NTVVKGKNIIIATGSDVKSLPGITIDEKRIVSSTGALALNEVPKKLVVIGAGYIGLEMGS 231
+ + +IATG + L GI D++ +SS +L P K +V+GA Y+ LE
Sbjct: 171 EKIYSAERFLIATGERPRYL-GIPGDKEYCISSDDLFSLPYCPGKTLVVGASYVALECAG 229
Query: 232 VWARLGSEVTVVEFAADIVPSMDGEIRKQFQRSLEKQKMKFMLK---TKVVGVDLSGDGV 288
A +G +VTV+ + ++ D ++ + +E+ +KF+ + KV ++ G
Sbjct: 230 FLAGIGLDVTVM-VRSILLRGFDQDMANKIGEHMEEHGIKFIRQFVPIKVEQIEAGTPGR 288
Query: 289 KLTLEPAAGGEKTIL-EADVVLVSAGRTPFTAGLGLDKIGVE-TDKMGRIPVNERFATNI 346
+ + E+ I E + V+++ GR T +GL+ +GV+ +K G+IPV + TN+
Sbjct: 289 LRVVAQSTNSEEIIEGEYNTVMLAIGRDACTRKIGLETVGVKINEKTGKIPVTDEEQTNV 348
Query: 347 PGVYAIGDVIPGPM-LAHKAEEDGVACVEFL-AGKHGHVDYDKVPGVVYTHPEVASVGKT 404
P +YAIGD++ + L A + G + L AG DY+ VP V+T E + G +
Sbjct: 349 PYIYAIGDILEDKVELTPVAIQAGRLLAQRLYAGSTVKCDYENVPTTVFTPLEYGACGLS 408
Query: 405 EEQ-VKELGVE----YRVGKFPFLANSRAKAIDDAEGIVKILAE-KETDKILGVHIMAPN 458
EE+ V++ G E Y +P ++ D+ + KI+ K+ ++++G H++ PN
Sbjct: 409 EEKAVEKFGEENIEVYHSYFWPLEWTIPSR--DNNKCYAKIICNTKDNERVVGFHVLGPN 466
Query: 459 AGELIHEAAMA 469
AGE+ A A
Sbjct: 467 AGEVTQGFAAA 477
>pdb|2J3N|A Chain A, X-Ray Structure Of Human Thioredoxin Reductase 1
pdb|2J3N|B Chain B, X-Ray Structure Of Human Thioredoxin Reductase 1
pdb|2J3N|C Chain C, X-Ray Structure Of Human Thioredoxin Reductase 1
pdb|2J3N|D Chain D, X-Ray Structure Of Human Thioredoxin Reductase 1
pdb|2J3N|E Chain E, X-Ray Structure Of Human Thioredoxin Reductase 1
pdb|2J3N|F Chain F, X-Ray Structure Of Human Thioredoxin Reductase 1
Length = 519
Score = 164 bits (415), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 126/431 (29%), Positives = 216/431 (50%), Gaps = 27/431 (6%)
Query: 61 KAAQLGLKTTCIE--------KRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGV 112
+AAQ G K ++ R LGGTC+NVGCIP K L+H + + +A+ ++G
Sbjct: 50 EAAQYGKKVMVLDFVTPTPLGTRWGLGGTCVNVGCIPKK-LMHQAALLGQALQDSRNYGW 108
Query: 113 KFS-SVEVDLPAMMAQKDKAVSNLTRGIEGLFKKNKVTYVKGYGKFISPSEVSVDTIEGG 171
K +V+ D M+ + +L G ++ KV Y YG+FI P + +G
Sbjct: 109 KVEETVKHDWDRMIEAVQNHIGSLNWGYRVALREKKVVYENAYGQFIGPHRIKATNNKGK 168
Query: 172 NTVVKGKNIIIATGSDVKSLPGITIDEKRIVSSTGALALNEVPKKLVVIGAGYIGLEMGS 231
+ + +IATG + L GI D++ +SS +L P K +V+GA Y+ LE
Sbjct: 169 EKIYSAERFLIATGERPRYL-GIPGDKEYCISSDDLFSLPYCPGKTLVVGASYVALECAG 227
Query: 232 VWARLGSEVTVVEFAADIVPSMDGEIRKQFQRSLEKQKMKFMLK---TKVVGVDLSGDGV 288
A +G +VTV+ + ++ D ++ + +E+ +KF+ + KV ++ G
Sbjct: 228 FLAGIGLDVTVM-VRSILLRGFDQDMANKIGEHMEEHGIKFIRQFVPIKVEQIEAGTPGR 286
Query: 289 KLTLEPAAGGEKTIL-EADVVLVSAGRTPFTAGLGLDKIGVE-TDKMGRIPVNERFATNI 346
+ + E+ I E + V+++ GR T +GL+ +GV+ +K G+IPV + TN+
Sbjct: 287 LRVVAQSTNSEEIIEGEYNTVMLAIGRDACTRKIGLETVGVKINEKTGKIPVTDEEQTNV 346
Query: 347 PGVYAIGDVIPGPM-LAHKAEEDGVACVEFL-AGKHGHVDYDKVPGVVYTHPEVASVGKT 404
P +YAIGD++ + L A + G + L AG DY+ VP V+T E + G +
Sbjct: 347 PYIYAIGDILEDKVELTPVAIQAGRLLAQRLYAGSTVKCDYENVPTTVFTPLEYGACGLS 406
Query: 405 EEQ-VKELGVE----YRVGKFPFLANSRAKAIDDAEGIVKILAE-KETDKILGVHIMAPN 458
EE+ V++ G E Y +P ++ D+ + KI+ K+ ++++G H++ PN
Sbjct: 407 EEKAVEKFGEENIEVYHSYFWPLEWTIPSR--DNNKCYAKIICNTKDNERVVGFHVLGPN 464
Query: 459 AGELIHEAAMA 469
AGE+ A A
Sbjct: 465 AGEVTQGFAAA 475
>pdb|1GRG|A Chain A, Substrate Binding And Catalysis By Glutathione Reductase
As Derived From Refined Enzyme: Substrate Crystal
Structures At 2 Angstroms Resolution
Length = 478
Score = 164 bits (415), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 117/425 (27%), Positives = 215/425 (50%), Gaps = 22/425 (5%)
Query: 58 AAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSV 117
+A +AA+LG + +E LGGT +NVGC+P K + +++ ++ E MH A +G
Sbjct: 35 SARRAAELGARAAVVESH-KLGGTXVNVGCVPKKVMWNTA-VHSEFMHDHADYGFPSCEG 92
Query: 118 EVDLPAMMAQKDKAVSNLTRGIEGLFKKNKVTYVKGYGKFISPSEVSVDTIEGGNTVVKG 177
+ + + ++D VS L + K+ + ++G+ F S + TIE
Sbjct: 93 KFNWRVIKEKRDAYVSRLNAIYQNNLTKSHIEIIRGHAAFTSDPK---PTIEVSGKKYTA 149
Query: 178 KNIIIATG-----SDVKSLPGITIDEKRIVSSTGALALNEVPKKLVVIGAGYIGLEMGSV 232
+I+IATG +PG ++ ++S G L E+P + V++GAGYI +EM +
Sbjct: 150 PHILIATGGMPSTPHESQIPGASLG----ITSDGFFQLEELPGRSVIVGAGYIAVEMAGI 205
Query: 233 WARLGSEVTVVEFAADIVPSMDGEIRKQFQRSLEKQKMKFMLKTKVVGVDLSGDGVKLTL 292
+ LGS+ +++ ++ S D I LE ++ + ++V V + G+++++
Sbjct: 206 LSALGSKTSLMIRHDKVLRSFDSMISTNCTEELENAGVEVLKFSQVKEVKKTLSGLEVSM 265
Query: 293 EPAAGGEKTIL----EADVVLVSAGRTPFTAGLGLDKIGVETDKMGRIPVNERFATNIPG 348
A G ++ + D +L + GR P T L L+K+G++TD G I V+E TN+ G
Sbjct: 266 VTAVPGRLPVMTMIPDVDCLLWAIGRVPNTKDLSLNKLGIQTDDKGHIIVDEFQNTNVKG 325
Query: 349 VYAIGDVIPGPMLAHKAEEDG--VACVEFLAGKHGHVDYDKVPGVVYTHPEVASVGKTE- 405
+YA+GDV +L A G +A F + +DY+ +P VV++HP + +VG TE
Sbjct: 326 IYAVGDVCGKALLTPVAIAAGRKLAHRLFEYKEDSKLDYNNIPTVVFSHPPIGTVGLTED 385
Query: 406 EQVKELGVE-YRVGKFPFLANSRAKAIDDAEGIVKILAEKETDKILGVHIMAPNAGELIH 464
E + + G+E + F A + ++K++ + +K++G+H+ E++
Sbjct: 386 EAIHKYGIENVKTYSTSFTPMYHAVTKRKTKCVMKMVCANKEEKVVGIHMQGLGCDEMLQ 445
Query: 465 EAAMA 469
A+A
Sbjct: 446 GFAVA 450
>pdb|1DNC|A Chain A, Human Glutathione Reductase Modified By
Diglutathione-Dinitroso-Iron
Length = 478
Score = 164 bits (415), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 117/425 (27%), Positives = 215/425 (50%), Gaps = 22/425 (5%)
Query: 58 AAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSV 117
+A +AA+LG + +E LGGTC+NVG +P K + +++ ++ E MH A +G
Sbjct: 35 SARRAAELGARAAVVESH-KLGGTCVNVGXVPKKVMWNTA-VHSEFMHDHADYGFPSCEG 92
Query: 118 EVDLPAMMAQKDKAVSNLTRGIEGLFKKNKVTYVKGYGKFISPSEVSVDTIEGGNTVVKG 177
+ + + ++D VS L + K+ + ++G+ F S + TIE
Sbjct: 93 KFNWRVIKEKRDAYVSRLNAIYQNNLTKSHIEIIRGHAAFTSDPK---PTIEVSGKKYTA 149
Query: 178 KNIIIATG-----SDVKSLPGITIDEKRIVSSTGALALNEVPKKLVVIGAGYIGLEMGSV 232
+I+IATG +PG ++ ++S G L E+P + V++GAGYI +EM +
Sbjct: 150 PHILIATGGMPSTPHESQIPGASLG----ITSDGFFQLEELPGRSVIVGAGYIAVEMAGI 205
Query: 233 WARLGSEVTVVEFAADIVPSMDGEIRKQFQRSLEKQKMKFMLKTKVVGVDLSGDGVKLTL 292
+ LGS+ +++ ++ S D I LE ++ + ++V V + G+++++
Sbjct: 206 LSALGSKTSLMIRHDKVLRSFDSMISTNCTEELENAGVEVLKFSQVKEVKKTLSGLEVSM 265
Query: 293 EPAAGGEKTIL----EADVVLVSAGRTPFTAGLGLDKIGVETDKMGRIPVNERFATNIPG 348
A G ++ + D +L + GR P T L L+K+G++TD G I V+E TN+ G
Sbjct: 266 VTAVPGRLPVMTMIPDVDCLLWAIGRVPNTKDLSLNKLGIQTDDKGHIIVDEFQNTNVKG 325
Query: 349 VYAIGDVIPGPMLAHKAEEDG--VACVEFLAGKHGHVDYDKVPGVVYTHPEVASVGKTE- 405
+YA+GDV +L A G +A F + +DY+ +P VV++HP + +VG TE
Sbjct: 326 IYAVGDVCGKALLTPVAIAAGRKLAHRLFEYKEDSKLDYNNIPTVVFSHPPIGTVGLTED 385
Query: 406 EQVKELGVE-YRVGKFPFLANSRAKAIDDAEGIVKILAEKETDKILGVHIMAPNAGELIH 464
E + + G+E + F A + ++K++ + +K++G+H+ E++
Sbjct: 386 EAIHKYGIENVKTYSTSFTPMYHAVTKRKTKCVMKMVCANKEEKVVGIHMQGLGCDEMLQ 445
Query: 465 EAAMA 469
A+A
Sbjct: 446 GFAVA 450
>pdb|1GSN|A Chain A, Human Glutathione Reductase Modified By
Dinitrosoglutathione
Length = 478
Score = 163 bits (413), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 117/425 (27%), Positives = 215/425 (50%), Gaps = 22/425 (5%)
Query: 58 AAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSV 117
+A +AA+LG + +E LGGTC+NVG +P K + +++ ++ E MH A +G
Sbjct: 35 SARRAAELGARAAVVESH-KLGGTCVNVGXVPKKVMWNTA-VHSEFMHDHADYGFPSCEG 92
Query: 118 EVDLPAMMAQKDKAVSNLTRGIEGLFKKNKVTYVKGYGKFISPSEVSVDTIEGGNTVVKG 177
+ + + ++D VS L + K+ + ++G+ F S + TIE
Sbjct: 93 KFNWRVIKEKRDAYVSRLNAIYQNNLTKSHIEIIRGHAAFTSDPK---PTIEVSGKKYTA 149
Query: 178 KNIIIATG-----SDVKSLPGITIDEKRIVSSTGALALNEVPKKLVVIGAGYIGLEMGSV 232
+I+IATG +PG ++ ++S G L E+P + V++GAGYI +EM +
Sbjct: 150 PHILIATGGMPSTPHESQIPGASLG----ITSDGFFQLEELPGRSVIVGAGYIAVEMAGI 205
Query: 233 WARLGSEVTVVEFAADIVPSMDGEIRKQFQRSLEKQKMKFMLKTKVVGVDLSGDGVKLTL 292
+ LGS+ +++ ++ S D I LE ++ + ++V V + G+++++
Sbjct: 206 LSALGSKTSLMIRHDKVLRSFDSMISTNXTEELENAGVEVLKFSQVKEVKKTLSGLEVSM 265
Query: 293 EPAAGGEKTIL----EADVVLVSAGRTPFTAGLGLDKIGVETDKMGRIPVNERFATNIPG 348
A G ++ + D +L + GR P T L L+K+G++TD G I V+E TN+ G
Sbjct: 266 VTAVPGRLPVMTMIPDVDXLLWAIGRVPNTKDLSLNKLGIQTDDKGHIIVDEFQNTNVKG 325
Query: 349 VYAIGDVIPGPMLAHKAEEDG--VACVEFLAGKHGHVDYDKVPGVVYTHPEVASVGKTE- 405
+YA+GDV +L A G +A F + +DY+ +P VV++HP + +VG TE
Sbjct: 326 IYAVGDVCGKALLTPVAIAAGRKLAHRLFEYKEDSKLDYNNIPTVVFSHPPIGTVGLTED 385
Query: 406 EQVKELGVE-YRVGKFPFLANSRAKAIDDAEGIVKILAEKETDKILGVHIMAPNAGELIH 464
E + + G+E + F A + ++K++ + +K++G+H+ E++
Sbjct: 386 EAIHKYGIENVKTYSTSFTPMYHAVTKRKTKCVMKMVXANKEEKVVGIHMQGLGCDEMLQ 445
Query: 465 EAAMA 469
A+A
Sbjct: 446 GFAVA 450
>pdb|1K4Q|A Chain A, Human Glutathione Reductase Inactivated By Peroxynitrite
Length = 463
Score = 161 bits (407), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 116/427 (27%), Positives = 215/427 (50%), Gaps = 24/427 (5%)
Query: 58 AAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSV 117
+A +AA+LG + +E LGGTC+NVGC+P K + +++ ++ E MH A +G
Sbjct: 18 SARRAAELGARAAVVESH-KLGGTCVNVGCVPKKVMWNTA-VHSEFMHDHADYGFPSCEG 75
Query: 118 EVDLPAMMAQKDKAVSNLTRGI--EGLFKKNKVTYVKGYGKFISPSEVSVDTIEGGNTVV 175
+ + + ++D + I + K+ + ++G+ F S + TIE
Sbjct: 76 KFNWRVIKEKRDAXYVSRLNAIXYQNNLTKSHIEIIRGHAAFTSDPK---PTIEVSGKKY 132
Query: 176 KGKNIIIATG-----SDVKSLPGITIDEKRIVSSTGALALNEVPKKLVVIGAGYIGLEMG 230
+I+IATG +PG ++ ++S G L E+P + V++GAGYI +EM
Sbjct: 133 TAPHILIATGGMPSTPHESQIPGASLG----ITSDGFFQLEELPGRSVIVGAGYIAVEMA 188
Query: 231 SVWARLGSEVTVVEFAADIVPSMDGEIRKQFQRSLEKQKMKFMLKTKVVGVDLSGDGVKL 290
+ + LGS+ +++ ++ S D I LE ++ + ++V V + G+++
Sbjct: 189 GILSALGSKTSLMIRHDKVLRSFDSMISTNCTEELENAGVEVLKFSQVKEVKKTLSGLEV 248
Query: 291 TLEPAAGGEKTIL----EADVVLVSAGRTPFTAGLGLDKIGVETDKMGRIPVNERFATNI 346
++ A G ++ + D +L + GR P T L L+K+G++TD G I V+E TN+
Sbjct: 249 SMVTAVPGRLPVMTMIPDVDCLLWAIGRVPNTKDLSLNKLGIQTDDKGHIIVDEFQNTNV 308
Query: 347 PGVYAIGDVIPGPMLAHKAEEDG--VACVEFLAGKHGHVDYDKVPGVVYTHPEVASVGKT 404
G+YA+GDV +L A G +A F + +DY+ +P VV++HP + +VG T
Sbjct: 309 KGIYAVGDVCGKALLTPVAIAAGRKLAHRLFEYKEDSKLDYNNIPTVVFSHPPIGTVGLT 368
Query: 405 E-EQVKELGVE-YRVGKFPFLANSRAKAIDDAEGIVKILAEKETDKILGVHIMAPNAGEL 462
E E + + G+E + F A + ++K++ + +K++G+H+ E+
Sbjct: 369 EDEAIHKYGIENVKTYSTSFTPMYHAVTKRKTKCVMKMVCANKEEKVVGIHMQGLGCDEM 428
Query: 463 IHEAAMA 469
+ A+A
Sbjct: 429 LQGFAVA 435
>pdb|1GES|A Chain A, Anatomy Of An Engineered Nad-Binding Site
pdb|1GES|B Chain B, Anatomy Of An Engineered Nad-Binding Site
pdb|1GEU|A Chain A, Anatomy Of An Engineered Nad-Binding Site
pdb|1GEU|B Chain B, Anatomy Of An Engineered Nad-Binding Site
Length = 450
Score = 160 bits (406), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 122/416 (29%), Positives = 201/416 (48%), Gaps = 22/416 (5%)
Query: 61 KAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFA-SHGVKFSSVEV 119
+AA G K IE + LGGTC+NVGC+P K + H++ + EA+H + +G + +
Sbjct: 22 RAAMYGQKCALIEAK-ELGGTCVNVGCVPKKVMWHAAQI-REAIHMYGPDYGFDTTINKF 79
Query: 120 DLPAMMAQKDKAVSNLTRGIEGLFKKNKVTYVKGYGKFISPSEVSVDTIEGGNTVVKGKN 179
+ ++A + + + E + KN V +KG+ +F V T+E + +
Sbjct: 80 NWETLIASRTAYIDRIHTSYENVLGKNNVDVIKGFARF-----VDAKTLEVNGETITADH 134
Query: 180 IIIATGSDVK--SLPGITIDEKRIVSSTGALALNEVPKKLVVIGAGYIGLEMGSVWARLG 237
I+IATG +PG+ + S G AL +P+++ V+GAGYIG+E+G V LG
Sbjct: 135 ILIATGGRPSHPDIPGVEYG----IDSDGFFALPALPERVAVVGAGYIGVELGGVINGLG 190
Query: 238 SEVTVVEFAADIVPSMDGEIRKQFQRSLEKQKMKFMLKTKVVGVDLSGDGVKLTLEPAAG 297
++ + E +PS D I + + + + V + DG LTLE G
Sbjct: 191 AKTHLFEMFDAPLPSFDPMISETLVEVMNAEGPQLHTNAIPKAVVKNTDG-SLTLELEDG 249
Query: 298 GEKTILEADVVLVSAGRTPFTAGLGLDKIGVETDKMGRIPVNERFATNIPGVYAIGDVIP 357
+T+ D ++ + GR P + L+ GV+T++ G I V++ TNI G+YA+GD
Sbjct: 250 RSETV---DCLIWAIGREPANDNINLEAAGVKTNEKGYIVVDKYQNTNIEGIYAVGDNTG 306
Query: 358 GPMLAHKAEEDGVACVEFLAGKHG--HVDYDKVPGVVYTHPEVASVGKTEEQVKEL--GV 413
L A G E L H+DY +P VV++HP + +VG TE Q +E
Sbjct: 307 AVELTPVAVAAGRRLSERLFNNKPDEHLDYSNIPTVVFSHPPIGTVGLTEPQAREQYGDD 366
Query: 414 EYRVGKFPFLANSRAKAIDDAEGIVKILAEKETDKILGVHIMAPNAGELIHEAAMA 469
+ +V K F A A +K++ +KI+G+H + E++ A+A
Sbjct: 367 QVKVYKSSFTAMYTAVTTHRQPCRMKLVCVGSEEKIVGIHGIGFGMDEMLQGFAVA 422
>pdb|2HQM|A Chain A, Crystal Structure Of Glutathione Reductase Glr1 From The
Yeast Saccharomyces Cerevisiae
pdb|2HQM|B Chain B, Crystal Structure Of Glutathione Reductase Glr1 From The
Yeast Saccharomyces Cerevisiae
Length = 479
Score = 157 bits (398), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 117/421 (27%), Positives = 207/421 (49%), Gaps = 22/421 (5%)
Query: 58 AAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHS-----FASHGV 112
+A +AA G KT +E + ALGGTC+NVGC+P K + ++S + H+ + + +
Sbjct: 26 SARRAASYGAKTLLVEAK-ALGGTCVNVGCVPKKVMWYASDLATRVSHANEYGLYQNLPL 84
Query: 113 KFSSVEVDLPAMMAQKDKAVSNLTRGIEGLFKKNKVTYVKGYGKFISPSEVSVDTIEGGN 172
+ + P ++D V L + +K KV V G+ +F V V +
Sbjct: 85 DKEHLTFNWPEFKQKRDAYVHRLNGIYQKNLEKEKVDVVFGWARFNKDGNVEVQKRDNTT 144
Query: 173 TVVKGKNIIIATGSDV---KSLPGITIDEKRIVSSTGALALNEVPKKLVVIGAGYIGLEM 229
V +I++ATG +++PG + S G L E PKK+VV+GAGYIG+E+
Sbjct: 145 EVYSANHILVATGGKAIFPENIPGFELG----TDSDGFFRLEEQPKKVVVVGAGYIGIEL 200
Query: 230 GSVWARLGSEVTVVEFAADIVPSMDGEIRKQFQRSLEKQKMKFMLKTKVVGVDLSGDGVK 289
V+ LGSE +V ++ D I+ K+ + +K+V V+ + + K
Sbjct: 201 AGVFHGLGSETHLVIRGETVLRKFDECIQNTITDHYVKEGINVHKLSKIVKVEKNVETDK 260
Query: 290 LTLEPAAGGEKTILEADVVLVSAGRTPFTAGLGLDKIGVETDKMGRIPVNERFATNIPGV 349
L + K+I + D ++ + GR G+G + +G++ + +I +E TN+P +
Sbjct: 261 LKIH--MNDSKSIDDVDELIWTIGRKSHL-GMGSENVGIKLNSHDQIIADEYQNTNVPNI 317
Query: 350 YAIGDVIPGPMLAHKAEEDGVACVEFLAG----KHGHVDYDKVPGVVYTHPEVASVGKTE 405
Y++GDV+ L A G L G ++ +DY+ VP V+++HPE S+G +E
Sbjct: 318 YSLGDVVGKVELTPVAIAAGRKLSNRLFGPEKFRNDKLDYENVPSVIFSHPEAGSIGISE 377
Query: 406 -EQVKELGVE-YRVGKFPFLANSRAKAIDDAEGIVKILAEKETDKILGVHIMAPNAGELI 463
E +++ G E +V F A A + + KI+ +K++G+HI+ ++ E++
Sbjct: 378 KEAIEKYGKENIKVYNSKFTAMYYAMLSEKSPTRYKIVCAGPNEKVVGLHIVGDSSAEIL 437
Query: 464 H 464
Sbjct: 438 Q 438
>pdb|2WBA|A Chain A, Properties Of Trypanothione Reductase From T. Brucei
pdb|2WBA|B Chain B, Properties Of Trypanothione Reductase From T. Brucei
Length = 492
Score = 151 bits (381), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 123/409 (30%), Positives = 206/409 (50%), Gaps = 37/409 (9%)
Query: 77 ALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKF--SSVEVDLPAMMAQKDKAVSN 134
ALGGTC+NVGC+P K L+ + Y + + A G +F SSV+ + ++A K++AV +
Sbjct: 47 ALGGTCVNVGCVPKK-LMVTGAQYMDHLRESAGFGWEFDGSSVKANWKKLIAAKNEAVLD 105
Query: 135 LTRGIEGLFKKNK-VTYVKGYGKFISPSEVSVDTIEGGNTVVKGK----NIIIATGS--D 187
+ + EG+F + + + G+G S + V V + VK + +I++ATGS
Sbjct: 106 INKSYEGMFNDTEGLDFFLGWGSLESKNVVVVRETADPKSAVKERLQADHILLATGSWPQ 165
Query: 188 VKSLPGITIDEKRIVSSTGALALNEVPKKLVVIGAGYIGLEMGSVWARL---GSEVTVVE 244
+ ++PGI + +SS A L E P++++ +G G+I +E ++ G +VT+
Sbjct: 166 MPAIPGI----EHCISSNEAFYLPEPPRRVLTVGGGFISVEFAGIFNAYKPPGGKVTLCY 221
Query: 245 FAADIVPSMDGEIRKQFQRSLEKQKMKFMLKTKVVGVDLSGDGVK-LTLEPAAGGEKTIL 303
I+ D IR++ + L ++ M V L+ DG K +T E KT L
Sbjct: 222 RNNLILRGFDETIREEVTKQLTANGIEIMTNENPAKVSLNTDGSKHVTFESG----KT-L 276
Query: 304 EADVVLVSAGRTPFTAGLGLDKIGVETDKMGRIPVNERFATNIPGVYAIGDVIPGPMLAH 363
+ DVV+++ GR P T L L +GV+ G + V+E TN+P +YAIGD+ ML
Sbjct: 277 DVDVVMMAIGRIPRTNDLQLGNVGVKLTPKGGVQVDEFSRTNVPNIYAIGDITDRLMLTP 336
Query: 364 KAEEDGVACVEFLAG-KHGHVDYDKVPGVVYTHPEVASVGKTEE----QVKELGVEYRVG 418
A +G A V+ + G K D+ +V V++ P + + G EE + +++ V Y
Sbjct: 337 VAINEGAALVDTVFGNKPRKTDHTRVASAVFSIPPIGTCGLIEEVAAKEFEKVAV-YMSS 395
Query: 419 KFPFLAN---SRAKAIDDAEGIVKILAEKETDKILGVHIMAPNAGELIH 464
P + N S+ K + KI+ +LGVH++ A E+I
Sbjct: 396 FTPLMHNISGSKYKKF-----VAKIVTNHSDGTVLGVHLLGDGAPEIIQ 439
>pdb|2WOI|A Chain A, Trypanothione Reductase From Trypanosoma Brucei
pdb|2WOI|B Chain B, Trypanothione Reductase From Trypanosoma Brucei
pdb|2WOI|C Chain C, Trypanothione Reductase From Trypanosoma Brucei
pdb|2WOI|D Chain D, Trypanothione Reductase From Trypanosoma Brucei
pdb|2WOV|A Chain A, Trypanosoma Brucei Trypanothione Reductase With Bound
Nadp.
pdb|2WOV|B Chain B, Trypanosoma Brucei Trypanothione Reductase With Bound
Nadp.
pdb|2WOV|C Chain C, Trypanosoma Brucei Trypanothione Reductase With Bound
Nadp.
pdb|2WOV|D Chain D, Trypanosoma Brucei Trypanothione Reductase With Bound
Nadp.
pdb|2WOW|A Chain A, Trypanosoma Brucei Trypanothione Reductase With Nadp And
Trypanothione Bound
pdb|2WOW|B Chain B, Trypanosoma Brucei Trypanothione Reductase With Nadp And
Trypanothione Bound
pdb|2WOW|C Chain C, Trypanosoma Brucei Trypanothione Reductase With Nadp And
Trypanothione Bound
pdb|2WOW|D Chain D, Trypanosoma Brucei Trypanothione Reductase With Nadp And
Trypanothione Bound
pdb|2WP5|A Chain A, Trypanosoma Brucei Trypanothione Reductase In Complex With
3,4-Dihydroquinazoline Inhibitor (Ddd00065414)
pdb|2WP5|B Chain B, Trypanosoma Brucei Trypanothione Reductase In Complex With
3,4-Dihydroquinazoline Inhibitor (Ddd00065414)
pdb|2WP5|C Chain C, Trypanosoma Brucei Trypanothione Reductase In Complex With
3,4-Dihydroquinazoline Inhibitor (Ddd00065414)
pdb|2WP5|D Chain D, Trypanosoma Brucei Trypanothione Reductase In Complex With
3,4-Dihydroquinazoline Inhibitor (Ddd00065414)
pdb|2WP6|A Chain A, Trypanosoma Brucei Trypanothione Reductase In Complex With
3,4-Dihydroquinazoline Inhibitor (Ddd00071494)
pdb|2WP6|B Chain B, Trypanosoma Brucei Trypanothione Reductase In Complex With
3,4-Dihydroquinazoline Inhibitor (Ddd00071494)
pdb|2WP6|C Chain C, Trypanosoma Brucei Trypanothione Reductase In Complex With
3,4-Dihydroquinazoline Inhibitor (Ddd00071494)
pdb|2WP6|D Chain D, Trypanosoma Brucei Trypanothione Reductase In Complex With
3,4-Dihydroquinazoline Inhibitor (Ddd00071494)
pdb|2WPC|A Chain A, Trypanosoma Brucei Trypanothione Reductase In Complex With
3,4-Dihydroquinazoline Inhibitor (Ddd00073357)
pdb|2WPC|B Chain B, Trypanosoma Brucei Trypanothione Reductase In Complex With
3,4-Dihydroquinazoline Inhibitor (Ddd00073357)
pdb|2WPC|C Chain C, Trypanosoma Brucei Trypanothione Reductase In Complex With
3,4-Dihydroquinazoline Inhibitor (Ddd00073357)
pdb|2WPC|D Chain D, Trypanosoma Brucei Trypanothione Reductase In Complex With
3,4-Dihydroquinazoline Inhibitor (Ddd00073357)
pdb|2WPE|A Chain A, Trypanosoma Brucei Trypanothione Reductase In Complex With
3,4-Dihydroquinazoline Inhibitor (Ddd00073359)
pdb|2WPE|B Chain B, Trypanosoma Brucei Trypanothione Reductase In Complex With
3,4-Dihydroquinazoline Inhibitor (Ddd00073359)
pdb|2WPE|C Chain C, Trypanosoma Brucei Trypanothione Reductase In Complex With
3,4-Dihydroquinazoline Inhibitor (Ddd00073359)
pdb|2WPE|D Chain D, Trypanosoma Brucei Trypanothione Reductase In Complex With
3,4-Dihydroquinazoline Inhibitor (Ddd00073359)
pdb|2WPF|A Chain A, Trypanosoma Brucei Trypanothione Reductase In Complex With
3,4-Dihydroquinazoline Inhibitor (Ddd00085762)
pdb|2WPF|B Chain B, Trypanosoma Brucei Trypanothione Reductase In Complex With
3,4-Dihydroquinazoline Inhibitor (Ddd00085762)
pdb|2WPF|C Chain C, Trypanosoma Brucei Trypanothione Reductase In Complex With
3,4-Dihydroquinazoline Inhibitor (Ddd00085762)
pdb|2WPF|D Chain D, Trypanosoma Brucei Trypanothione Reductase In Complex With
3,4-Dihydroquinazoline Inhibitor (Ddd00085762)
Length = 495
Score = 151 bits (381), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 123/409 (30%), Positives = 206/409 (50%), Gaps = 37/409 (9%)
Query: 77 ALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKF--SSVEVDLPAMMAQKDKAVSN 134
ALGGTC+NVGC+P K L+ + Y + + A G +F SSV+ + ++A K++AV +
Sbjct: 50 ALGGTCVNVGCVPKK-LMVTGAQYMDHLRESAGFGWEFDGSSVKANWKKLIAAKNEAVLD 108
Query: 135 LTRGIEGLFKKNK-VTYVKGYGKFISPSEVSVDTIEGGNTVVKGK----NIIIATGS--D 187
+ + EG+F + + + G+G S + V V + VK + +I++ATGS
Sbjct: 109 INKSYEGMFNDTEGLDFFLGWGSLESKNVVVVRETADPKSAVKERLQADHILLATGSWPQ 168
Query: 188 VKSLPGITIDEKRIVSSTGALALNEVPKKLVVIGAGYIGLEMGSVWARL---GSEVTVVE 244
+ ++PGI + +SS A L E P++++ +G G+I +E ++ G +VT+
Sbjct: 169 MPAIPGI----EHCISSNEAFYLPEPPRRVLTVGGGFISVEFAGIFNAYKPPGGKVTLCY 224
Query: 245 FAADIVPSMDGEIRKQFQRSLEKQKMKFMLKTKVVGVDLSGDGVK-LTLEPAAGGEKTIL 303
I+ D IR++ + L ++ M V L+ DG K +T E KT L
Sbjct: 225 RNNLILRGFDETIREEVTKQLTANGIEIMTNENPAKVSLNTDGSKHVTFESG----KT-L 279
Query: 304 EADVVLVSAGRTPFTAGLGLDKIGVETDKMGRIPVNERFATNIPGVYAIGDVIPGPMLAH 363
+ DVV+++ GR P T L L +GV+ G + V+E TN+P +YAIGD+ ML
Sbjct: 280 DVDVVMMAIGRIPRTNDLQLGNVGVKLTPKGGVQVDEFSRTNVPNIYAIGDITDRLMLTP 339
Query: 364 KAEEDGVACVEFLAG-KHGHVDYDKVPGVVYTHPEVASVGKTEE----QVKELGVEYRVG 418
A +G A V+ + G K D+ +V V++ P + + G EE + +++ V Y
Sbjct: 340 VAINEGAALVDTVFGNKPRKTDHTRVASAVFSIPPIGTCGLIEEVAAKEFEKVAV-YMSS 398
Query: 419 KFPFLAN---SRAKAIDDAEGIVKILAEKETDKILGVHIMAPNAGELIH 464
P + N S+ K + KI+ +LGVH++ A E+I
Sbjct: 399 FTPLMHNISGSKYKKF-----VAKIVTNHSDGTVLGVHLLGDGAPEIIQ 442
>pdb|1GER|A Chain A, The Structure Of Glutathione Reductase From Escherichia
Coli At 1.86 Angstroms Resolution: Comparison With The
Enzyme From Human Erythrocytes
pdb|1GER|B Chain B, The Structure Of Glutathione Reductase From Escherichia
Coli At 1.86 Angstroms Resolution: Comparison With The
Enzyme From Human Erythrocytes
pdb|1GET|A Chain A, Anatomy Of An Engineered Nad-Binding Site
pdb|1GET|B Chain B, Anatomy Of An Engineered Nad-Binding Site
Length = 450
Score = 149 bits (375), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 118/416 (28%), Positives = 197/416 (47%), Gaps = 22/416 (5%)
Query: 61 KAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFA-SHGVKFSSVEV 119
+AA G K IE + LGGTC+NVGC+P K + H++ + EA+H + +G + +
Sbjct: 22 RAAMYGQKCALIEAK-ELGGTCVNVGCVPKKVMWHAAQI-REAIHMYGPDYGFDTTINKF 79
Query: 120 DLPAMMAQKDKAVSNLTRGIEGLFKKNKVTYVKGYGKFISPSEVSVDTIEGGNTVVKGKN 179
+ ++A + + + E + KN V +KG+ +F V T+E + +
Sbjct: 80 NWETLIASRTAYIDRIHTSYENVLGKNNVDVIKGFARF-----VDAKTLEVNGETITADH 134
Query: 180 IIIATGSDVK--SLPGITIDEKRIVSSTGALALNEVPKKLVVIGAGYIGLEMGSVWARLG 237
I+IATG +PG+ + S G AL +P+++ V+GAGYI +E+ V LG
Sbjct: 135 ILIATGGRPSHPDIPGVEYG----IDSDGFFALPALPERVAVVGAGYIAVELAGVINGLG 190
Query: 238 SEVTVVEFAADIVPSMDGEIRKQFQRSLEKQKMKFMLKTKVVGVDLSGDGVKLTLEPAAG 297
++ + + S D I + + + + V + DG LTLE G
Sbjct: 191 AKTHLFVRKHAPLRSFDPMISETLVEVMNAEGPQLHTNAIPKAVVKNTDG-SLTLELEDG 249
Query: 298 GEKTILEADVVLVSAGRTPFTAGLGLDKIGVETDKMGRIPVNERFATNIPGVYAIGDVIP 357
+T+ D ++ + GR P + L+ GV+T++ G I V++ TNI G+YA+GD
Sbjct: 250 RSETV---DCLIWAIGREPANDNINLEAAGVKTNEKGYIVVDKYQNTNIEGIYAVGDNTG 306
Query: 358 GPMLAHKAEEDGVACVEFLAGKHG--HVDYDKVPGVVYTHPEVASVGKTEEQVKEL--GV 413
L A G E L H+DY +P VV++HP + +VG TE Q +E
Sbjct: 307 AVELTPVAVAAGRRLSERLFNNKPDEHLDYSNIPTVVFSHPPIGTVGLTEPQAREQYGDD 366
Query: 414 EYRVGKFPFLANSRAKAIDDAEGIVKILAEKETDKILGVHIMAPNAGELIHEAAMA 469
+ +V K F A A +K++ +KI+G+H + E++ A+A
Sbjct: 367 QVKVYKSSFTAMYTAVTTHRQPCRMKLVCVGSEEKIVGIHGIGFGMDEMLQGFAVA 422
>pdb|1TYT|A Chain A, Crystal And Molecular Structure Of Crithidia Fasciculata
Trypanothione Reductase At 2.6 Angstroms Resolution
pdb|1TYT|B Chain B, Crystal And Molecular Structure Of Crithidia Fasciculata
Trypanothione Reductase At 2.6 Angstroms Resolution
Length = 487
Score = 147 bits (372), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 124/410 (30%), Positives = 197/410 (48%), Gaps = 29/410 (7%)
Query: 77 ALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFS--SVEVDLPAMMAQKDKAVSN 134
ALGGTC+NVGC+P K ++ ++ Y + + A G + SV + A++A K+KAVS
Sbjct: 47 ALGGTCVNVGCVPKKLMVTGAN-YMDTIRESAGFGWELDRESVRPNWKALIAAKNKAVSG 105
Query: 135 LTRGIEGLFKKNK-VTYVKGYGKFISPSEVSVDTIEGGNTVV----KGKNIIIATGSDVK 189
+ EG+F + +T+ +G+G V V N+ V + I++ATGS +
Sbjct: 106 INDSYEGMFADTEGLTFHQGFGALQDNHTVLVRESADPNSAVLETLDTEYILLATGSWPQ 165
Query: 190 SLPGITIDEKRIVSSTGALALNEVPKKLVVIGAGYIGLEMGSVW----ARLGSEVTVVEF 245
L GI D+ ++S A L+E PK+ + +G GYI +E ++ AR G +V +
Sbjct: 166 HL-GIEGDD-LCITSNEAFYLDEAPKRALCVGGGYISIEFAGIFNAYKAR-GGQVDLAYR 222
Query: 246 AADIVPSMDGEIRKQFQRSLEKQKMKFMLKTKVVGVDLSGDGVK-LTLEPAAGGEKTILE 304
I+ D E+RKQ L + V + DG + + E A +
Sbjct: 223 GDMILRGFDSELRKQLTEQLRANGINVRTHENPAKVTKNADGTRHVVFESGAEADY---- 278
Query: 305 ADVVLVSAGRTPFTAGLGLDKIGVETDKMGRIPVNERFATNIPGVYAIGDVIPGPMLAHK 364
DVV+++ GR P + L LDK GVE K G I V+ TN+ +YAIGDV ML
Sbjct: 279 -DVVMLAIGRVPRSQTLQLDKAGVEVAKNGAIKVDAYSKTNVDNIYAIGDVTDRVMLTPV 337
Query: 365 AEEDGVACVE-FLAGKHGHVDYDKVPGVVYTHPEVASVGKTEE----QVKELGVEYRVGK 419
A +G A V+ A K D+ KV V++ P + G EE + ++ V Y
Sbjct: 338 AINEGAAFVDTVFANKPRATDHTKVACAVFSIPPMGVCGYVEEDAAKKYDQVAV-YESSF 396
Query: 420 FPFLANSRAKAIDDAEGIVKILAEKETDKILGVHIMAPNAGELIHEAAMA 469
P + N + +V+I+ ++LGVH++ ++ E+I A+
Sbjct: 397 TPLMHNISGSTY--KKFMVRIVTNHADGEVLGVHMLGDSSPEIIQSVAIC 444
>pdb|1TYP|A Chain A, Substrate Interactions Between Trypanothione Reductase And
N1-Glutathionylspermidine Disulphide At 0.28-Nm
Resolution
pdb|1TYP|B Chain B, Substrate Interactions Between Trypanothione Reductase And
N1-Glutathionylspermidine Disulphide At 0.28-Nm
Resolution
Length = 487
Score = 147 bits (372), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 124/410 (30%), Positives = 197/410 (48%), Gaps = 29/410 (7%)
Query: 77 ALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFS--SVEVDLPAMMAQKDKAVSN 134
ALGGTC+NVGC+P K ++ ++ Y + + A G + SV + A++A K+KAVS
Sbjct: 47 ALGGTCVNVGCVPKKLMVTGAN-YMDTIRESAGFGWELDRESVRPNWKALIAAKNKAVSG 105
Query: 135 LTRGIEGLFKKNK-VTYVKGYGKFISPSEVSVDTIEGGNTVV----KGKNIIIATGSDVK 189
+ EG+F + +T+ +G+G V V N+ V + I++ATGS +
Sbjct: 106 INDSYEGMFADTEGLTFHQGWGALQDNHTVLVRESADPNSAVLETLDTEYILLATGSWPQ 165
Query: 190 SLPGITIDEKRIVSSTGALALNEVPKKLVVIGAGYIGLEMGSVW----ARLGSEVTVVEF 245
L GI D+ ++S A L+E PK+ + +G GYI +E ++ AR G +V +
Sbjct: 166 HL-GIEGDD-LCITSNEAFYLDEAPKRALCVGGGYISIEFAGIFNAYKAR-GGQVDLAYR 222
Query: 246 AADIVPSMDGEIRKQFQRSLEKQKMKFMLKTKVVGVDLSGDGVK-LTLEPAAGGEKTILE 304
I+ D E+RKQ L + V + DG + + E A +
Sbjct: 223 GDMILRGFDSELRKQLTEQLRANGINVRTHENPAKVTKNADGTRHVVFESGAEADY---- 278
Query: 305 ADVVLVSAGRTPFTAGLGLDKIGVETDKMGRIPVNERFATNIPGVYAIGDVIPGPMLAHK 364
DVV+++ GR P + L LDK GVE K G I V+ TN+ +YAIGDV ML
Sbjct: 279 -DVVMLAIGRVPRSQTLQLDKAGVEVAKNGAIKVDAYSKTNVDNIYAIGDVTDRVMLTPV 337
Query: 365 AEEDGVACVE-FLAGKHGHVDYDKVPGVVYTHPEVASVGKTEE----QVKELGVEYRVGK 419
A +G A V+ A K D+ KV V++ P + G EE + ++ V Y
Sbjct: 338 AINEGAAFVDTVFANKPRATDHTKVACAVFSIPPMGVCGYVEEDAAKKYDQVAV-YESSF 396
Query: 420 FPFLANSRAKAIDDAEGIVKILAEKETDKILGVHIMAPNAGELIHEAAMA 469
P + N + +V+I+ ++LGVH++ ++ E+I A+
Sbjct: 397 TPLMHNISGSTY--KKFMVRIVTNHADGEVLGVHMLGDSSPEIIQSVAIC 444
>pdb|3H4K|A Chain A, Crystal Structure Of The Wild Type Thioredoxin Glutatione
Reductase From Schistosoma Mansoni In Complex With
Auranofin
Length = 598
Score = 146 bits (368), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 124/433 (28%), Positives = 201/433 (46%), Gaps = 27/433 (6%)
Query: 61 KAAQLGLKT--------TCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGV 112
+AA+ G KT T I LGGTC+NVGCIP K L+H + + A+ G
Sbjct: 125 EAAKYGAKTAVLDYVEPTPIGTTWGLGGTCVNVGCIPKK-LMHQAGLLSHALEDAEHFGW 183
Query: 113 KF--SSVEVDLPAMMAQKDKAVSNLTRGIEGLFKKNKVTYVKGYGKFISPSEVSVDTIEG 170
S + + M+ + +L G + + N+VTY+ G+ ISP EV +
Sbjct: 184 SLDRSKISHNWSTMVEGVQSHIGSLNWGYKVALRDNQVTYLNAKGRLISPHEVQITDKNQ 243
Query: 171 GNTVVKGKNIIIATGSDVKSLPGITIDEKRIVSSTGALALNEVPKKLVVIGAGYIGLEMG 230
+ + G II+ATG K P I + ++S +L P K +VIGA Y+ LE
Sbjct: 244 KVSTITGNKIILATGERPK-YPEIPGAVEYGITSDDLFSLPYFPGKTLVIGASYVALECA 302
Query: 231 SVWARLGSEVTVVEFAADIVPSMDGEIRKQFQRSLEKQKMKF--------MLKTKVVGVD 282
A LG +VTV+ + ++ D ++ ++ +E +KF + + KVV +
Sbjct: 303 GFLASLGGDVTVM-VRSILLRGFDQQMAEKVGDYMENHGVKFAKLCVPDEIKQLKVVDTE 361
Query: 283 LSGDGVKLTLEPAAGGEKTILEADVVLVSAGRTPFTAGLGLDKIGVETDKMGRIPVNERF 342
+ G+ L G+K E + V+ + GR P + + + +GV+ DK GR+ +
Sbjct: 362 NNKPGLLLVKGHYTDGKKFEEEFETVIFAVGREPQLSKVLCETVGVKLDKNGRVVCTDDE 421
Query: 343 ATNIPGVYAIGDVIPG-PMLAHKAEEDG-VACVEFLAGKHGHVDYDKVPGVVYTHPEVAS 400
T + VYAIGD+ G P L A + G AG DY V V+T E +
Sbjct: 422 QTTVSNVYAIGDINAGKPQLTPVAIQAGRYLARRLFAGATELTDYSNVATTVFTPLEYGA 481
Query: 401 VGKTEEQ-VKELG---VEYRVGKFPFLANSRAKAIDDAEGIVKILAEKETDKILGVHIMA 456
G +EE +++ G +E F L + A D+ + + + + ++LG+H++
Sbjct: 482 CGLSEEDAIEKYGDKDIEVYHSNFKPLEWTVAHREDNVCYMKLVCRKSDNMRVLGLHVLG 541
Query: 457 PNAGELIHEAAMA 469
PNAGE+ A+A
Sbjct: 542 PNAGEITQGYAVA 554
>pdb|2X8C|A Chain A, Thioredoxin Glutathione Reductase From Schistosoma Mansoni
With The Reduced C-Terminal End
pdb|2X8C|B Chain B, Thioredoxin Glutathione Reductase From Schistosoma Mansoni
With The Reduced C-Terminal End
pdb|2X8G|A Chain A, Oxidized Thioredoxin Glutathione Reductase From
Schistosoma Mansoni
pdb|2X8H|A Chain A, Thioredoxin Glutathione Reductase From Schistosoma Mansoni
In Complex With Gsh
pdb|2X99|A Chain A, Thioredoxin Glutathione Reductase From Schistosoma Mansoni
In Complex With Nadph
Length = 598
Score = 145 bits (367), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 124/433 (28%), Positives = 201/433 (46%), Gaps = 27/433 (6%)
Query: 61 KAAQLGLKT--------TCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGV 112
+AA+ G KT T I LGGTC+NVGCIP K L+H + + A+ G
Sbjct: 125 EAAKYGAKTAVLDYVEPTPIGTTWGLGGTCVNVGCIPKK-LMHQAGLLSHALEDAEHFGW 183
Query: 113 KF--SSVEVDLPAMMAQKDKAVSNLTRGIEGLFKKNKVTYVKGYGKFISPSEVSVDTIEG 170
S + + M+ + +L G + + N+VTY+ G+ ISP EV +
Sbjct: 184 SLDRSKISHNWSTMVEGVQSHIGSLNWGYKVALRDNQVTYLNAKGRLISPHEVQITDKNQ 243
Query: 171 GNTVVKGKNIIIATGSDVKSLPGITIDEKRIVSSTGALALNEVPKKLVVIGAGYIGLEMG 230
+ + G II+ATG K P I + ++S +L P K +VIGA Y+ LE
Sbjct: 244 KVSTITGNKIILATGERPK-YPEIPGAVEYGITSDDLFSLPYFPGKTLVIGASYVALECA 302
Query: 231 SVWARLGSEVTVVEFAADIVPSMDGEIRKQFQRSLEKQKMKF--------MLKTKVVGVD 282
A LG +VTV+ + ++ D ++ ++ +E +KF + + KVV +
Sbjct: 303 GFLASLGGDVTVM-VRSILLRGFDQQMAEKVGDYMENHGVKFAKLCVPDEIKQLKVVDTE 361
Query: 283 LSGDGVKLTLEPAAGGEKTILEADVVLVSAGRTPFTAGLGLDKIGVETDKMGRIPVNERF 342
+ G+ L G+K E + V+ + GR P + + + +GV+ DK GR+ +
Sbjct: 362 NNKPGLLLVKGHYTDGKKFEEEFETVIFAVGREPQLSKVLCETVGVKLDKNGRVVCTDDE 421
Query: 343 ATNIPGVYAIGDVIPG-PMLAHKAEEDG-VACVEFLAGKHGHVDYDKVPGVVYTHPEVAS 400
T + VYAIGD+ G P L A + G AG DY V V+T E +
Sbjct: 422 QTTVSNVYAIGDINAGKPQLTPVAIQAGRYLARRLFAGATELTDYSNVATTVFTPLEYGA 481
Query: 401 VGKTEEQ-VKELG---VEYRVGKFPFLANSRAKAIDDAEGIVKILAEKETDKILGVHIMA 456
G +EE +++ G +E F L + A D+ + + + + ++LG+H++
Sbjct: 482 CGLSEEDAIEKYGDKDIEVYHSNFKPLEWTVAHREDNVCYMKLVCRKSDNMRVLGLHVLG 541
Query: 457 PNAGELIHEAAMA 469
PNAGE+ A+A
Sbjct: 542 PNAGEITQGYAVA 554
>pdb|1NDA|A Chain A, The Structure Of Trypanosoma Cruzi Trypanothione Reductase
In The Oxidized And Nadph Reduced State
pdb|1NDA|B Chain B, The Structure Of Trypanosoma Cruzi Trypanothione Reductase
In The Oxidized And Nadph Reduced State
pdb|1NDA|C Chain C, The Structure Of Trypanosoma Cruzi Trypanothione Reductase
In The Oxidized And Nadph Reduced State
pdb|1NDA|D Chain D, The Structure Of Trypanosoma Cruzi Trypanothione Reductase
In The Oxidized And Nadph Reduced State
Length = 491
Score = 145 bits (367), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 118/408 (28%), Positives = 205/408 (50%), Gaps = 36/408 (8%)
Query: 77 ALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKF--SSVEVDLPAMMAQKDKAVSN 134
ALGGTC+NVGC+P K L+ + Y E + A G +F +++ + ++A KD+AV N
Sbjct: 47 ALGGTCVNVGCVPKK-LMVTGAQYMEHLRESAGFGWEFDRTTLRAEWKKLIAVKDEAVLN 105
Query: 135 LTRGIEGLFKKNK-VTYVKGYGKFISPSEVSVDTIEGGNTVVKGK----NIIIATGS--D 187
+ + E +F+ + + + G+G S + V+V + VK + NI++A+GS
Sbjct: 106 INKSYEEMFRDTEGLEFFLGWGSLESKNVVNVRESADPASAVKERLETENILLASGSWPH 165
Query: 188 VKSLPGITIDEKRIVSSTGALALNEVPKKLVVIGAGYIGLEMGSVWARL---GSEVTVVE 244
+ ++PGI + +SS A L E P++++ +G G+I +E ++ +VT+
Sbjct: 166 MPNIPGI----EHCISSNEAFYLPEPPRRVLTVGGGFISVEFAGIFNAYKPKDGQVTLCY 221
Query: 245 FAADIVPSMDGEIRKQFQRSLEKQKMKFMLKTKVVGVDLSGDGVK-LTLEPAAGGEKTIL 303
I+ D +R++ + L ++ + K V+L+ DG K +T E G+K +
Sbjct: 222 RGEMILRGFDHTLREELTKQLTANGIQILTKENPAKVELNADGSKSVTFE---SGKK--M 276
Query: 304 EADVVLVSAGRTPFTAGLGLDKIGVETDKMGRIPVNERFATNIPGVYAIGDVIPGPMLAH 363
+ D+V+++ GR+P T L L GV K G + V+E TN+ +YAIGDV ML
Sbjct: 277 DFDLVMMAIGRSPRTKDLQLQNAGVMI-KNGGVQVDEYSRTNVSNIYAIGDVTNRVMLTP 335
Query: 364 KAEEDGVACVEFLAGKHGH-VDYDKVPGVVYTHPEVASVGKTEE---QVKELGVEYRVGK 419
A + A V+ + G + D+ +V V++ P + + G EE + E+ Y
Sbjct: 336 VAINEAAALVDTVFGTNPRKTDHTRVASAVFSIPPIGTCGLIEEVASKRYEVVAVYLSSF 395
Query: 420 FPFLAN---SRAKAIDDAEGIVKILAEKETDKILGVHIMAPNAGELIH 464
P + N S+ K + KI+ +LGVH++ NA E+I
Sbjct: 396 TPLMHNISGSKYKTF-----VAKIITNHSDGTVLGVHLLGDNAPEIIQ 438
>pdb|2V6O|A Chain A, Structure Of Schistosoma Mansoni Thioredoxin-Glutathione
Reductase (Smtgr)
Length = 596
Score = 145 bits (367), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 124/433 (28%), Positives = 201/433 (46%), Gaps = 27/433 (6%)
Query: 61 KAAQLGLKT--------TCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGV 112
+AA+ G KT T I LGGTC+NVGCIP K L+H + + A+ G
Sbjct: 125 EAAKYGAKTAVLDYVEPTPIGTTWGLGGTCVNVGCIPKK-LMHQAGLLSHALEDAEHFGW 183
Query: 113 KF--SSVEVDLPAMMAQKDKAVSNLTRGIEGLFKKNKVTYVKGYGKFISPSEVSVDTIEG 170
S + + M+ + +L G + + N+VTY+ G+ ISP EV +
Sbjct: 184 SLDRSKISHNWSTMVEGVQSHIGSLNWGYKVALRDNQVTYLNAKGRLISPHEVQITDKNQ 243
Query: 171 GNTVVKGKNIIIATGSDVKSLPGITIDEKRIVSSTGALALNEVPKKLVVIGAGYIGLEMG 230
+ + G II+ATG K P I + ++S +L P K +VIGA Y+ LE
Sbjct: 244 KVSTITGNKIILATGERPK-YPEIPGAVEYGITSDDLFSLPYFPGKTLVIGASYVALECA 302
Query: 231 SVWARLGSEVTVVEFAADIVPSMDGEIRKQFQRSLEKQKMKF--------MLKTKVVGVD 282
A LG +VTV+ + ++ D ++ ++ +E +KF + + KVV +
Sbjct: 303 GFLASLGGDVTVM-VRSILLRGFDQQMAEKVGDYMENHGVKFAKLCVPDEIKQLKVVDTE 361
Query: 283 LSGDGVKLTLEPAAGGEKTILEADVVLVSAGRTPFTAGLGLDKIGVETDKMGRIPVNERF 342
+ G+ L G+K E + V+ + GR P + + + +GV+ DK GR+ +
Sbjct: 362 NNKPGLLLVKGHYTDGKKFEEEFETVIFAVGREPQLSKVLCETVGVKLDKNGRVVCTDDE 421
Query: 343 ATNIPGVYAIGDVIPG-PMLAHKAEEDG-VACVEFLAGKHGHVDYDKVPGVVYTHPEVAS 400
T + VYAIGD+ G P L A + G AG DY V V+T E +
Sbjct: 422 QTTVSNVYAIGDINAGKPQLTPVAIQAGRYLARRLFAGATELTDYSNVATTVFTPLEYGA 481
Query: 401 VGKTEEQ-VKELG---VEYRVGKFPFLANSRAKAIDDAEGIVKILAEKETDKILGVHIMA 456
G +EE +++ G +E F L + A D+ + + + + ++LG+H++
Sbjct: 482 CGLSEEDAIEKYGDKDIEVYHSNFKPLEWTVAHREDNVCYMKLVCRKSDNMRVLGLHVLG 541
Query: 457 PNAGELIHEAAMA 469
PNAGE+ A+A
Sbjct: 542 PNAGEITQGYAVA 554
>pdb|1FEA|A Chain A, Unliganded Crithidia Fasciculata Trypanothione Reductase
At 2.2 Angstrom Resolution
pdb|1FEA|B Chain B, Unliganded Crithidia Fasciculata Trypanothione Reductase
At 2.2 Angstrom Resolution
pdb|1FEA|C Chain C, Unliganded Crithidia Fasciculata Trypanothione Reductase
At 2.2 Angstrom Resolution
pdb|1FEA|D Chain D, Unliganded Crithidia Fasciculata Trypanothione Reductase
At 2.2 Angstrom Resolution
pdb|1FEB|A Chain A, Unliganded Crithidia Fasciculata Trypanothione Reductase
At 2.0 Angstrom Resolution
pdb|1FEB|B Chain B, Unliganded Crithidia Fasciculata Trypanothione Reductase
At 2.0 Angstrom Resolution
pdb|1FEC|A Chain A, Unliganded Crithidia Fasciculata Trypanothione Reductase
At 1.7 Angstrom Resolution
pdb|1FEC|B Chain B, Unliganded Crithidia Fasciculata Trypanothione Reductase
At 1.7 Angstrom Resolution
Length = 490
Score = 145 bits (367), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 123/410 (30%), Positives = 197/410 (48%), Gaps = 29/410 (7%)
Query: 77 ALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFS--SVEVDLPAMMAQKDKAVSN 134
ALGGTC+NVGC+P K ++ ++ Y + + A G + SV + A++A K+KAVS
Sbjct: 46 ALGGTCVNVGCVPKKLMVTGAN-YMDTIRESAGFGWELDRESVRPNWKALIAAKNKAVSG 104
Query: 135 LTRGIEGLFKKNK-VTYVKGYGKFISPSEVSVDTIEGGNTVV----KGKNIIIATGSDVK 189
+ EG+F + +T+ +G+G V V N+ V + I++ATGS +
Sbjct: 105 INDSYEGMFADTEGLTFHQGFGALQDNHTVLVRESADPNSAVLETLDTEYILLATGSWPQ 164
Query: 190 SLPGITIDEKRIVSSTGALALNEVPKKLVVIGAGYIGLEMGSVW----ARLGSEVTVVEF 245
L GI D+ ++S A L+E PK+ + +G GYI +E ++ AR G +V +
Sbjct: 165 HL-GIEGDD-LCITSNEAFYLDEAPKRALCVGGGYISIEFAGIFNAYKAR-GGQVDLAYR 221
Query: 246 AADIVPSMDGEIRKQFQRSLEKQKMKFMLKTKVVGVDLSGDGVK-LTLEPAAGGEKTILE 304
I+ D E+RKQ L + V + DG + + E A +
Sbjct: 222 GDMILRGFDSELRKQLTEQLRANGINVRTHENPAKVTKNADGTRHVVFESGAEADY---- 277
Query: 305 ADVVLVSAGRTPFTAGLGLDKIGVETDKMGRIPVNERFATNIPGVYAIGDVIPGPMLAHK 364
DVV+++ GR P + L L+K GVE K G I V+ TN+ +YAIGDV ML
Sbjct: 278 -DVVMLAIGRVPRSQTLQLEKAGVEVAKNGAIKVDAYSKTNVDNIYAIGDVTDRVMLTPV 336
Query: 365 AEEDGVACVE-FLAGKHGHVDYDKVPGVVYTHPEVASVGKTEE----QVKELGVEYRVGK 419
A +G A V+ A K D+ KV V++ P + G EE + ++ V Y
Sbjct: 337 AINEGAAFVDTVFANKPRATDHTKVACAVFSIPPMGVCGYVEEDAAKKYDQVAV-YESSF 395
Query: 420 FPFLANSRAKAIDDAEGIVKILAEKETDKILGVHIMAPNAGELIHEAAMA 469
P + N + +V+I+ ++LGVH++ ++ E+I A+
Sbjct: 396 TPLMHNISGSTY--KKFMVRIVTNHADGEVLGVHMLGDSSPEIIQSVAIC 443
>pdb|2TPR|A Chain A, X-ray Structure Of Trypanothione Reductase From Crithidia
Fasciculata At 2.4 Angstroms Resolution
pdb|2TPR|B Chain B, X-ray Structure Of Trypanothione Reductase From Crithidia
Fasciculata At 2.4 Angstroms Resolution
Length = 490
Score = 145 bits (366), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 123/410 (30%), Positives = 197/410 (48%), Gaps = 29/410 (7%)
Query: 77 ALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFS--SVEVDLPAMMAQKDKAVSN 134
ALGGTC+NVGC+P K ++ ++ Y + + A G + SV + A++A K+KAVS
Sbjct: 46 ALGGTCVNVGCVPKKLMVTGAN-YMDTIRESAGFGWELDRESVRPNWKALIAAKNKAVSG 104
Query: 135 LTRGIEGLFKKNK-VTYVKGYGKFISPSEVSVDTIEGGNTVV----KGKNIIIATGSDVK 189
+ EG+F + +T+ +G+G V V N+ V + I++ATGS +
Sbjct: 105 INDSYEGMFADTEGLTFHQGFGALQDNHTVLVRESADPNSAVLETLDTEYILLATGSWPQ 164
Query: 190 SLPGITIDEKRIVSSTGALALNEVPKKLVVIGAGYIGLEMGSVW----ARLGSEVTVVEF 245
L GI D+ ++S A L+E PK+ + +G GYI +E ++ AR G +V +
Sbjct: 165 HL-GIEGDD-LCITSNEAFYLDEAPKRALCVGGGYISIEFAGIFNAYKAR-GGQVDLAYR 221
Query: 246 AADIVPSMDGEIRKQFQRSLEKQKMKFMLKTKVVGVDLSGDGVK-LTLEPAAGGEKTILE 304
I+ D E+RKQ L + V + DG + + E A +
Sbjct: 222 GDMILRGFDSELRKQLTEQLRANGINVRTHENPAKVTKNADGTRHVVFESGAEADY---- 277
Query: 305 ADVVLVSAGRTPFTAGLGLDKIGVETDKMGRIPVNERFATNIPGVYAIGDVIPGPMLAHK 364
DVV+++ GR P + L L+K GVE K G I V+ TN+ +YAIGDV ML
Sbjct: 278 -DVVMLAIGRVPRSQTLQLEKAGVEVAKNGAIKVDAYSKTNVDNIYAIGDVTDRVMLTPV 336
Query: 365 AEEDGVACVE-FLAGKHGHVDYDKVPGVVYTHPEVASVGKTEE----QVKELGVEYRVGK 419
A +G A V+ A K D+ KV V++ P + G EE + ++ V Y
Sbjct: 337 AINEGAAFVDTVFANKPRATDHTKVACAVFSIPPMGVCGYVEEDAAKKYDQVAV-YESSF 395
Query: 420 FPFLANSRAKAIDDAEGIVKILAEKETDKILGVHIMAPNAGELIHEAAMA 469
P + N + +V+I+ ++LGVH++ ++ E+I A+
Sbjct: 396 TPLMHNISGSTY--KKFMVRIVTNHADGEVLGVHMLGDSSPEIIQSVAIC 443
>pdb|1BZL|A Chain A, Crystal Structure Of Trypanosoma Cruzi Trypanothione
Reductase In Complex With Trypanothione, And The
Structure- Based Discovery Of New Natural Product
Inhibitors
pdb|1BZL|B Chain B, Crystal Structure Of Trypanosoma Cruzi Trypanothione
Reductase In Complex With Trypanothione, And The
Structure- Based Discovery Of New Natural Product
Inhibitors
Length = 486
Score = 139 bits (350), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 115/408 (28%), Positives = 204/408 (50%), Gaps = 36/408 (8%)
Query: 77 ALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKF--SSVEVDLPAMMAQKDKAVSN 134
ALGGTC+NVGC+P K L+ + Y E + A G +F +++ + ++A KD+AV N
Sbjct: 47 ALGGTCVNVGCVPKK-LMVTGAQYMEHLRESAGFGWEFDRTTLRAEWKNLIAVKDEAVLN 105
Query: 135 LTRGIEGLFKKNK-VTYVKGYGKFISPSEVSVDTIEGGNTVVKGK----NIIIATGS--D 187
+ + + +F+ + + + G+G S + V+V + VK + +I++A+GS
Sbjct: 106 INKSYDEMFRDTEGLEFFLGWGSLESKNVVNVRESADPASAVKERLETEHILLASGSWPH 165
Query: 188 VKSLPGITIDEKRIVSSTGALALNEVPKKLVVIGAGYIGLEMGSVWARL---GSEVTVVE 244
+ ++PGI + +SS A L E P++++ +G G+I +E ++ +VT+
Sbjct: 166 MPNIPGI----EHCISSNEAFYLPEPPRRVLTVGGGFISVEFAGIFNAYKPKDGQVTLCY 221
Query: 245 FAADIVPSMDGEIRKQFQRSLEKQKMKFMLKTKVVGVDLSGDGVK-LTLEPAAGGEKTIL 303
I+ D +R++ + L ++ + K V+L+ DG K +T E G+K +
Sbjct: 222 RGEMILRGFDHTLREELTKQLTANGIQILTKENPAKVELNADGSKSVTFE---SGKK--M 276
Query: 304 EADVVLVSAGRTPFTAGLGLDKIGVETDKMGRIPVNERFATNIPGVYAIGDVIPGPMLAH 363
+ D+V+++ GR+P T L L GV K G + V+E TN+ +YAIGDV ML
Sbjct: 277 DFDLVMMAIGRSPRTKDLQLQNAGVMI-KNGGVQVDEYSRTNVSNIYAIGDVTNRVMLTP 335
Query: 364 KAEEDGVACVEFLAGKHGH-VDYDKVPGVVYTHPEVASVGKTEE---QVKELGVEYRVGK 419
A + A V+ + G D+ +V V++ P + + G EE + E+ Y
Sbjct: 336 VAINEAAALVDTVFGTTPRKTDHTRVASAVFSIPPIGTCGLIEEVASKRYEVVAVYLSSF 395
Query: 420 FPFL---ANSRAKAIDDAEGIVKILAEKETDKILGVHIMAPNAGELIH 464
P + + S+ K + KI+ +LGVH++ NA E+I
Sbjct: 396 TPLMHKVSGSKYKTF-----VAKIITNHSDGTVLGVHLLGDNAPEIIQ 438
>pdb|1AOG|A Chain A, Trypanosoma Cruzi Trypanothione Reductase (Oxidized Form)
pdb|1AOG|B Chain B, Trypanosoma Cruzi Trypanothione Reductase (Oxidized Form)
Length = 485
Score = 139 bits (350), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 115/408 (28%), Positives = 204/408 (50%), Gaps = 36/408 (8%)
Query: 77 ALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKF--SSVEVDLPAMMAQKDKAVSN 134
ALGGTC+NVGC+P K L+ + Y E + A G +F +++ + ++A KD+AV N
Sbjct: 46 ALGGTCVNVGCVPKK-LMVTGAQYMEHLRESAGFGWEFDRTTLRAEWKNLIAVKDEAVLN 104
Query: 135 LTRGIEGLFKKNK-VTYVKGYGKFISPSEVSVDTIEGGNTVVKGK----NIIIATGS--D 187
+ + + +F+ + + + G+G S + V+V + VK + +I++A+GS
Sbjct: 105 INKSYDEMFRDTEGLEFFLGWGSLESKNVVNVRESADPASAVKERLETEHILLASGSWPH 164
Query: 188 VKSLPGITIDEKRIVSSTGALALNEVPKKLVVIGAGYIGLEMGSVWARL---GSEVTVVE 244
+ ++PGI + +SS A L E P++++ +G G+I +E ++ +VT+
Sbjct: 165 MPNIPGI----EHCISSNEAFYLPEPPRRVLTVGGGFISVEFAGIFNAYKPKDGQVTLCY 220
Query: 245 FAADIVPSMDGEIRKQFQRSLEKQKMKFMLKTKVVGVDLSGDGVK-LTLEPAAGGEKTIL 303
I+ D +R++ + L ++ + K V+L+ DG K +T E G+K +
Sbjct: 221 RGEMILRGFDHTLREELTKQLTANGIQILTKENPAKVELNADGSKSVTFE---SGKK--M 275
Query: 304 EADVVLVSAGRTPFTAGLGLDKIGVETDKMGRIPVNERFATNIPGVYAIGDVIPGPMLAH 363
+ D+V+++ GR+P T L L GV K G + V+E TN+ +YAIGDV ML
Sbjct: 276 DFDLVMMAIGRSPRTKDLQLQNAGVMI-KNGGVQVDEYSRTNVSNIYAIGDVTNRVMLTP 334
Query: 364 KAEEDGVACVEFLAGKHGH-VDYDKVPGVVYTHPEVASVGKTEE---QVKELGVEYRVGK 419
A + A V+ + G D+ +V V++ P + + G EE + E+ Y
Sbjct: 335 VAINEAAALVDTVFGTTPRKTDHTRVASAVFSIPPIGTCGLIEEVASKRYEVVAVYLSSF 394
Query: 420 FPFL---ANSRAKAIDDAEGIVKILAEKETDKILGVHIMAPNAGELIH 464
P + + S+ K + KI+ +LGVH++ NA E+I
Sbjct: 395 TPLMHKVSGSKYKTF-----VAKIITNHSDGTVLGVHLLGDNAPEIIQ 437
>pdb|1GXF|A Chain A, Crystal Structure Of Trypanosoma Cruzi Trypanothione
Reductase In Complex With The Inhibitor Quinacrine
Mustard
pdb|1GXF|B Chain B, Crystal Structure Of Trypanosoma Cruzi Trypanothione
Reductase In Complex With The Inhibitor Quinacrine
Mustard
Length = 492
Score = 139 bits (349), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 115/408 (28%), Positives = 204/408 (50%), Gaps = 36/408 (8%)
Query: 77 ALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKF--SSVEVDLPAMMAQKDKAVSN 134
ALGGTC+NVGC+P K L+ + Y E + A G +F +++ + ++A KD+AV N
Sbjct: 48 ALGGTCVNVGCVPKK-LMVTGAQYMEHLRESAGFGWEFDRTTLRAEWKNLIAVKDEAVLN 106
Query: 135 LTRGIEGLFKKNK-VTYVKGYGKFISPSEVSVDTIEGGNTVVKGK----NIIIATGS--D 187
+ + + +F+ + + + G+G S + V+V + VK + +I++A+GS
Sbjct: 107 INKSYDEMFRDTEGLEFFLGWGSLESKNVVNVRESADPASAVKERLETEHILLASGSWPH 166
Query: 188 VKSLPGITIDEKRIVSSTGALALNEVPKKLVVIGAGYIGLEMGSVWARL---GSEVTVVE 244
+ ++PGI + +SS A L E P++++ +G G+I +E ++ +VT+
Sbjct: 167 MPNIPGI----EHCISSNEAFYLPEPPRRVLTVGGGFISVEFAGIFNAYKPKDGQVTLCY 222
Query: 245 FAADIVPSMDGEIRKQFQRSLEKQKMKFMLKTKVVGVDLSGDGVK-LTLEPAAGGEKTIL 303
I+ D +R++ + L ++ + K V+L+ DG K +T E G+K +
Sbjct: 223 RGEMILRGFDHTLREELTKQLTANGIQILTKENPAKVELNADGSKSVTFE---SGKK--M 277
Query: 304 EADVVLVSAGRTPFTAGLGLDKIGVETDKMGRIPVNERFATNIPGVYAIGDVIPGPMLAH 363
+ D+V+++ GR+P T L L GV K G + V+E TN+ +YAIGDV ML
Sbjct: 278 DFDLVMMAIGRSPRTKDLQLQNAGVMI-KNGGVQVDEYSRTNVSNIYAIGDVTNRVMLTP 336
Query: 364 KAEEDGVACVEFLAGKHGH-VDYDKVPGVVYTHPEVASVGKTEE---QVKELGVEYRVGK 419
A + A V+ + G D+ +V V++ P + + G EE + E+ Y
Sbjct: 337 VAINEAAALVDTVFGTTPRKTDHTRVASAVFSIPPIGTCGLIEEVASKRYEVVAVYLSSF 396
Query: 420 FPFL---ANSRAKAIDDAEGIVKILAEKETDKILGVHIMAPNAGELIH 464
P + + S+ K + KI+ +LGVH++ NA E+I
Sbjct: 397 TPLMHKVSGSKYKTF-----VAKIITNHSDGTVLGVHLLGDNAPEIIQ 439
>pdb|3DH9|A Chain A, Crystal Structure Of Drosophila Thioredoxin Reductase,
Wild-Type
pdb|3DH9|B Chain B, Crystal Structure Of Drosophila Thioredoxin Reductase,
Wild-Type
Length = 482
Score = 139 bits (349), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 120/415 (28%), Positives = 197/415 (47%), Gaps = 25/415 (6%)
Query: 69 TTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSS-VEVDLPAMMAQ 127
T + + +GGTC+NVGCIP K L+H + + EA+H A++G ++ D ++
Sbjct: 40 TPTLGTKWGVGGTCVNVGCIPKK-LMHQASLLGEAVHEAAAYGWNVDDKIKPDWHKLVQS 98
Query: 128 KDKAVSNLTRGIEGLFKKNKVTYVKGYGKFISPSEVSVDTIEGGNTVVKGKNIIIATGSD 187
+ ++ + KV Y+ G G F+ S + ++ G + + +IA G
Sbjct: 99 VQNHIKSVNWVTRVDLRDKKVEYINGLGSFVD-SHTLLAKLKSGERTITAQTFVIAVGGR 157
Query: 188 VKSLPGITIDEKRIVSSTGALALNEVPKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAA 247
+ P I + ++S +L+ P K +V+GAGYIGLE LG E TV+ +
Sbjct: 158 PR-YPDIPGAVEYGITSDDLFSLDREPGKTLVVGAGYIGLECAGFLKGLGYEPTVM-VRS 215
Query: 248 DIVPSMDGEIRKQFQRSLEKQKMKFMLKTKVVGVDLSGDGVKLT-LEPAAGGEKTILEAD 306
++ D ++ + S+E++ + F+ KT + V+ DG L + GE++ D
Sbjct: 216 IVLRGFDQQMAELVAASMEERGIPFLRKTVPLSVEKQDDGKLLVKYKNVETGEESEDVYD 275
Query: 307 VVLVSAGRTPFTAGLGLDKIGVETDKMGRIPVNERFATNIPGVYAIGDVIPG-PMLAHKA 365
VL + GR L L GV K +IPV+ + ATN+ +YA+GD+I G P L A
Sbjct: 276 TVLWAIGRKGLVDDLNLPNAGVTVQK-DKIPVDSQEATNVANIYAVGDIIYGKPELTPVA 334
Query: 366 EEDG-VACVEFLAGKHGHVDYDKVPGVVYTHPEVASVGKTEEQ-VKELGVE--------Y 415
G + G +DY V V+T E A VG +EE VK+ G + Y
Sbjct: 335 VLAGRLLARRLYGGSTQRMDYKDVATTVFTPLEYACVGLSEEDAVKQFGADEIEVFHGYY 394
Query: 416 RVGKFPFLANSRAKAIDDAEGIVKILAEKETD-KILGVHIMAPNAGELIHEAAMA 469
+ +F F+ + +K +AE+ D ++ G+H + P AGE+I A A
Sbjct: 395 KPTEF-FIPQKSVRYC-----YLKAVAERHGDQRVYGLHYIGPVAGEVIQGFAAA 443
>pdb|3DGH|A Chain A, Crystal Structure Of Drosophila Thioredoxin Reductase,
C-Terminal 8- Residue Truncation
pdb|3DGH|B Chain B, Crystal Structure Of Drosophila Thioredoxin Reductase,
C-Terminal 8- Residue Truncation
Length = 483
Score = 138 bits (348), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 120/415 (28%), Positives = 197/415 (47%), Gaps = 25/415 (6%)
Query: 69 TTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSS-VEVDLPAMMAQ 127
T + + +GGTC+NVGCIP K L+H + + EA+H A++G ++ D ++
Sbjct: 44 TPTLGTKWGVGGTCVNVGCIPKK-LMHQASLLGEAVHEAAAYGWNVDDKIKPDWHKLVQS 102
Query: 128 KDKAVSNLTRGIEGLFKKNKVTYVKGYGKFISPSEVSVDTIEGGNTVVKGKNIIIATGSD 187
+ ++ + KV Y+ G G F+ S + ++ G + + +IA G
Sbjct: 103 VQNHIKSVNWVTRVDLRDKKVEYINGLGSFVD-SHTLLAKLKSGERTITAQTFVIAVGGR 161
Query: 188 VKSLPGITIDEKRIVSSTGALALNEVPKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAA 247
+ P I + ++S +L+ P K +V+GAGYIGLE LG E TV+ +
Sbjct: 162 PR-YPDIPGAVEYGITSDDLFSLDREPGKTLVVGAGYIGLECAGFLKGLGYEPTVM-VRS 219
Query: 248 DIVPSMDGEIRKQFQRSLEKQKMKFMLKTKVVGVDLSGDGVKLT-LEPAAGGEKTILEAD 306
++ D ++ + S+E++ + F+ KT + V+ DG L + GE++ D
Sbjct: 220 IVLRGFDQQMAELVAASMEERGIPFLRKTVPLSVEKQDDGKLLVKYKNVETGEESEDVYD 279
Query: 307 VVLVSAGRTPFTAGLGLDKIGVETDKMGRIPVNERFATNIPGVYAIGDVIPG-PMLAHKA 365
VL + GR L L GV K +IPV+ + ATN+ +YA+GD+I G P L A
Sbjct: 280 TVLWAIGRKGLVDDLNLPNAGVTVQK-DKIPVDSQEATNVANIYAVGDIIYGKPELTPVA 338
Query: 366 EEDG-VACVEFLAGKHGHVDYDKVPGVVYTHPEVASVGKTEEQ-VKELGVE--------Y 415
G + G +DY V V+T E A VG +EE VK+ G + Y
Sbjct: 339 VLAGRLLARRLYGGSTQRMDYKDVATTVFTPLEYACVGLSEEDAVKQFGADEIEVFHGYY 398
Query: 416 RVGKFPFLANSRAKAIDDAEGIVKILAEKETD-KILGVHIMAPNAGELIHEAAMA 469
+ +F F+ + +K +AE+ D ++ G+H + P AGE+I A A
Sbjct: 399 KPTEF-FIPQKSVRYC-----YLKAVAERHGDQRVYGLHYIGPVAGEVIQGFAAA 447
>pdb|2NVK|X Chain X, Crystal Structure Of Thioredoxin Reductase From Drosophila
Melanogaster
Length = 488
Score = 138 bits (348), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 120/415 (28%), Positives = 197/415 (47%), Gaps = 25/415 (6%)
Query: 69 TTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSS-VEVDLPAMMAQ 127
T + + +GGTC+NVGCIP K L+H + + EA+H A++G ++ D ++
Sbjct: 44 TPTLGTKWGVGGTCVNVGCIPKK-LMHQASLLGEAVHEAAAYGWNVDDKIKPDWHKLVQS 102
Query: 128 KDKAVSNLTRGIEGLFKKNKVTYVKGYGKFISPSEVSVDTIEGGNTVVKGKNIIIATGSD 187
+ ++ + KV Y+ G G F+ S + ++ G + + +IA G
Sbjct: 103 VQNHIKSVNWVTRVDLRDKKVEYINGLGSFVD-SHTLLAKLKSGERTITAQTFVIAVGGR 161
Query: 188 VKSLPGITIDEKRIVSSTGALALNEVPKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAA 247
+ P I + ++S +L+ P K +V+GAGYIGLE LG E TV+ +
Sbjct: 162 PR-YPDIPGAVEYGITSDDLFSLDREPGKTLVVGAGYIGLECAGFLKGLGYEPTVM-VRS 219
Query: 248 DIVPSMDGEIRKQFQRSLEKQKMKFMLKTKVVGVDLSGDGVKLT-LEPAAGGEKTILEAD 306
++ D ++ + S+E++ + F+ KT + V+ DG L + GE++ D
Sbjct: 220 IVLRGFDQQMAELVAASMEERGIPFLRKTVPLSVEKQDDGKLLVKYKNVETGEESEDVYD 279
Query: 307 VVLVSAGRTPFTAGLGLDKIGVETDKMGRIPVNERFATNIPGVYAIGDVIPG-PMLAHKA 365
VL + GR L L GV K +IPV+ + ATN+ +YA+GD+I G P L A
Sbjct: 280 TVLWAIGRKGLVDDLNLPNAGVTVQK-DKIPVDSQEATNVANIYAVGDIIYGKPELTPVA 338
Query: 366 EEDG-VACVEFLAGKHGHVDYDKVPGVVYTHPEVASVGKTEEQ-VKELGVE--------Y 415
G + G +DY V V+T E A VG +EE VK+ G + Y
Sbjct: 339 VLAGRLLARRLYGGSTQRMDYKDVATTVFTPLEYACVGLSEEDAVKQFGADEIEVFHGYY 398
Query: 416 RVGKFPFLANSRAKAIDDAEGIVKILAEKETD-KILGVHIMAPNAGELIHEAAMA 469
+ +F F+ + +K +AE+ D ++ G+H + P AGE+I A A
Sbjct: 399 KPTEF-FIPQKSVRYC-----YLKAVAERHGDQRVYGLHYIGPVAGEVIQGFAAA 447
>pdb|4DNA|A Chain A, Crystal Structure Of Putative Glutathione Reductase From
Sinorhizobium Meliloti 1021
pdb|4DNA|B Chain B, Crystal Structure Of Putative Glutathione Reductase From
Sinorhizobium Meliloti 1021
Length = 463
Score = 135 bits (340), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 109/408 (26%), Positives = 190/408 (46%), Gaps = 25/408 (6%)
Query: 62 AAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSVEVDL 121
AA LG K I + GGTC+ GC+P K +++S + E A G D
Sbjct: 24 AAALG-KKVAIAEEFRYGGTCVIRGCVPKKLYVYASQ-FAEHFEDAAGFGWTVGESRFDW 81
Query: 122 PAMMAQKDKAVSNLTRGIEGLFKKNKVT----YVKGYGKFISPSEVSVDTIEGGNTVVKG 177
++A K++ ++ L EGL++K + + P+ V + + G TV
Sbjct: 82 AKLVAAKEQEIARL----EGLYRKGLANAGAEILDTRAELAGPNTVKL--LASGKTVT-A 134
Query: 178 KNIIIATG---SDVKSLPGITIDEKRIVSSTGALALNEVPKKLVVIGAGYIGLEMGSVWA 234
+ I+IA G S +LPG + ++S A L +P+ +++ G GYI +E +++
Sbjct: 135 ERIVIAVGGHPSPHDALPG----HELCITSNEAFDLPALPESILIAGGGYIAVEFANIFH 190
Query: 235 RLGSEVTVVEFAADIVPSMDGEIRKQFQRSLEKQKMKFMLKTKVVGVDLSGDGVKLTLEP 294
LG + T++ +I+ D + R+ + E++ ++ + + + V DG ++
Sbjct: 191 GLGVKTTLIYRGKEILSRFDQDXRRGLHAAXEEKGIRILCEDIIQSVSADADGRRVATTX 250
Query: 295 AAGGEKTILEADVVLVSAGRTPFTAGLGLDKIGVETDKMGRIPVNERFATNIPGVYAIGD 354
G + AD V ++ GR P T GLGL+ GV T+++G I V+ T+ PG+YA+GD
Sbjct: 251 KHGE----IVADQVXLALGRXPNTNGLGLEAAGVRTNELGAIIVDAFSRTSTPGIYALGD 306
Query: 355 VIPGPMLAHKAEEDGVACVEF-LAGKHGHVDYDKVPGVVYTHPEVASVGKTEEQVKELGV 413
V L A + +E D+D + V++ PE+ +VG TEE+
Sbjct: 307 VTDRVQLTPVAIHEAXCFIETEYKNNPTSPDHDLIATAVFSQPEIGTVGITEEEAARKFQ 366
Query: 414 EYRVGKFPFLANSRAKAIDDAEGIVKILAEKETDKILGVHIMAPNAGE 461
E V + F + + I K++ K++G HI+ +AGE
Sbjct: 367 EIEVYRAEFRPXKATLSGRKEKTIXKLVVNAADRKVVGAHILGHDAGE 414
>pdb|3O0H|A Chain A, Crystal Structure Of Glutathione Reductase From Bartonella
Henselae
pdb|3O0H|B Chain B, Crystal Structure Of Glutathione Reductase From Bartonella
Henselae
Length = 484
Score = 135 bits (339), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 105/410 (25%), Positives = 199/410 (48%), Gaps = 20/410 (4%)
Query: 58 AAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSV 117
AA A LG K I + +GGTC+ GC+P K ++S E S G K++
Sbjct: 41 AARLAGALG-KRVAIAEEYRIGGTCVIRGCVPKKLYFYASQYAQEFSKSIG-FGWKYADP 98
Query: 118 EVDLPAMMAQKDKAVSNLTRGIEGLFKK----NKVTYVKGYGKFISPSEVSVDTIEGGNT 173
+ ++A K+K +S L EGL+++ + V + F+ + + ++ G
Sbjct: 99 IFNWEKLVAAKNKEISRL----EGLYREGLQNSNVHIYESRAVFVDEHTLEL-SVTGER- 152
Query: 174 VVKGKNIIIATGSDVKSLPGITIDEKRIVSSTGALALNEVPKKLVVIGAGYIGLEMGSVW 233
+ + I+IATG+ + S I ++S L ++PK +V++G GYIG+E +++
Sbjct: 153 -ISAEKILIATGAKIVSNSAIK-GSDLCLTSNEIFDLEKLPKSIVIVGGGYIGVEFANIF 210
Query: 234 ARLGSEVTVVEFAADIVPSMDGEIRKQFQRSLEKQKMKFMLKTKVVGVDLSGDGVKLTLE 293
LG + T++ I+ + D ++R+ ++ + + + + V V + + + L
Sbjct: 211 HGLGVKTTLLHRGDLILRNFDYDLRQLLNDAMVAKGISIIYEATVSQVQSTENCYNVVLT 270
Query: 294 PAAGGEKTILEADVVLVSAGRTPFTAGLGLDKIGVETDKMGRIPVNERFATNIPGVYAIG 353
+TI AD V+++ GR P T GLGL++ GV+ ++ G + V+E+ TN+ ++A+G
Sbjct: 271 NG----QTIC-ADRVMLATGRVPNTTGLGLERAGVKVNEFGAVVVDEKMTTNVSHIWAVG 325
Query: 354 DVIPGPMLAHKAEEDGVACVE-FLAGKHGHVDYDKVPGVVYTHPEVASVGKTEEQVKELG 412
DV L A D + V+ DYD + V++ PE+ +VG +EE
Sbjct: 326 DVTGHIQLTPVAIHDAMCFVKNAFENTSTTPDYDLITTAVFSQPEIGTVGLSEEDALHRY 385
Query: 413 VEYRVGKFPFLANSRAKAIDDAEGIVKILAEKETDKILGVHIMAPNAGEL 462
+ + F + + +K++ + E+ ++G H++ NAGE+
Sbjct: 386 KRVEIYRTVFRPMRNVLSGSPEKMFMKLVVDGESRIVVGAHVLGENAGEI 435
>pdb|3IC9|A Chain A, The Structure Of Dihydrolipoamide Dehydrogenase From
Colwellia Psychrerythraea 34h.
pdb|3IC9|B Chain B, The Structure Of Dihydrolipoamide Dehydrogenase From
Colwellia Psychrerythraea 34h.
pdb|3IC9|C Chain C, The Structure Of Dihydrolipoamide Dehydrogenase From
Colwellia Psychrerythraea 34h.
pdb|3IC9|D Chain D, The Structure Of Dihydrolipoamide Dehydrogenase From
Colwellia Psychrerythraea 34h
Length = 492
Score = 134 bits (336), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 114/430 (26%), Positives = 200/430 (46%), Gaps = 28/430 (6%)
Query: 59 AIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHM-YHEAMHSFASHGVKFSSV 117
A +AA+ + + GA G TC VGC PSK L+ ++ YH + G++ +
Sbjct: 23 AYRAAKKHTDKVVLIEGGAYGTTCARVGCXPSKLLIAAADASYHASQTDL--FGIQVDRI 80
Query: 118 EVDLPA----MMAQKDKAVSNLTRGIEGLFKKNKVTYVKGYGKFISPSEVSVDTIEGGNT 173
V+ A + ++D+ V + +E +++K+ +G+ KF+ + VD ++
Sbjct: 81 SVNGKAVXKRIQTERDRFVGFVVESVESFDEQDKI---RGFAKFLDEHTLQVDD----HS 133
Query: 174 VVKGKNIIIATGSDVKSLPGITIDEKRIVSSTGALALNEVPKKLVVIGAGYIGLEMGSVW 233
V K I+IATGS + R++++ LN++PK + V G G IGLE+G
Sbjct: 134 QVIAKRIVIATGSRPNYPEFLAAAGSRLLTNDNLFELNDLPKSVAVFGPGVIGLELGQAL 193
Query: 234 ARLGSEVTVVEFAADIVPSMDGEIRKQFQRSLEKQKMKFMLKTKVVGVDLSGDGVKLTLE 293
+RLG V V + + D E ++ +++ ++ F K +V+ D V++
Sbjct: 194 SRLGVIVKVFGRSGSVANLQDEEXKRYAEKTF-NEEFYFDAKARVISTIEKEDAVEVIYF 252
Query: 294 PAAGGEKTILEADVVLVSAGRTPFTAGLGLDKIGVETDKMGRIPVNE-RFATNIPGVYAI 352
+ G+KT VL + GR LGL+ +E DK +E T++ ++
Sbjct: 253 DKS-GQKTTESFQYVLAATGRKANVDKLGLENTSIELDKKNSPLFDELTLQTSVDHIFVA 311
Query: 353 GDVIPGPMLAHKAEEDG-VACVEFLAGKHGHV--DYDKVP-GVVYTHPEVASVGKTEEQV 408
GD L H+A +DG VA AG + + + P VV+T P+VASVG + Q+
Sbjct: 312 GDANNTLTLLHEAADDGKVAGTN--AGAYPVIAQGQRRAPLSVVFTEPQVASVGLSLRQI 369
Query: 409 KEL-----GVEYRVGKFPFLANSRAKAIDDAEGIVKILAEKETDKILGVHIMAPNAGELI 463
++L Y VG+ F R++ +G++ + A++ + + LG P A +
Sbjct: 370 EDLYADQDAANYVVGQVSFEGQGRSRVXGKNKGLLNVYADRTSGEFLGAEXFGPAAEHIG 429
Query: 464 HEAAMATHDK 473
H A A +
Sbjct: 430 HLLAWARQQQ 439
>pdb|2JK6|A Chain A, Structure Of Trypanothione Reductase From Leishmania
Infantum
pdb|2JK6|B Chain B, Structure Of Trypanothione Reductase From Leishmania
Infantum
pdb|2W0H|A Chain A, X Ray Structure Of Leishmania Infantum Trypanothione
Reductase In Complex With Antimony And Nadph
pdb|2W0H|B Chain B, X Ray Structure Of Leishmania Infantum Trypanothione
Reductase In Complex With Antimony And Nadph
pdb|2YAU|A Chain A, X-Ray Structure Of The Leishmania Infantum Tryopanothione
Reductase In Complex With Auranofin
pdb|2YAU|B Chain B, X-Ray Structure Of The Leishmania Infantum Tryopanothione
Reductase In Complex With Auranofin
pdb|4ADW|A Chain A, Crystal Structure Of Leishmania Infantum Trypanothione
Reductase In Complex With Nadph And Trypanothione
pdb|4ADW|B Chain B, Crystal Structure Of Leishmania Infantum Trypanothione
Reductase In Complex With Nadph And Trypanothione
Length = 511
Score = 130 bits (327), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 112/407 (27%), Positives = 189/407 (46%), Gaps = 23/407 (5%)
Query: 77 ALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFS--SVEVDLPAMMAQKDKAVSN 134
ALGGTC+NVGC+P K L+ + Y + + G + S+ + ++A K+K V++
Sbjct: 67 ALGGTCVNVGCVPKK-LMVTGAQYMDLIRESGGFGWEMDRESLCPNWKTLIAAKNKVVNS 125
Query: 135 LTRGIEGLFKKNK-VTYVKGYGKFISPSEVSVDTIEGGNT----VVKGKNIIIATGSDVK 189
+ + +F + +++ G+G V V E ++ + + I+IATGS
Sbjct: 126 INESYKSMFADTEGLSFHMGFGALQDAHTVVVRKSEDPHSDVLETLDTEYILIATGSWPT 185
Query: 190 SLPGITIDEKRIVSSTGALALNEVPKKLVVIGAGYIGLEMGSV---WARLGSEVTVVEFA 246
L G+ DE I S+ A L + PK+++ +G GYI +E + + G V +
Sbjct: 186 RL-GVPGDEFCITSNE-AFYLEDAPKRMLCVGGGYIAVEFAGIFNGYKPCGGYVDLCYRG 243
Query: 247 ADIVPSMDGEIRKQFQRSLEKQKMKFMLKTKVVGVDLSGDGVKLTLEPAAGGEKTILEAD 306
I+ D E+RK + L ++ + + DG + G E+ + D
Sbjct: 244 DLILRGFDTEVRKSLTKQLGANGIRVRTNLNPTKITKNEDGSN-HVHFNDGTEE---DYD 299
Query: 307 VVLVSAGRTPFTAGLGLDKIGVETDKMGRIPVNERFATNIPGVYAIGDVIPGPMLAHKAE 366
V+++ GR P + L LDK GV T K G + V+ T++ +YAIGDV ML A
Sbjct: 300 QVMLAIGRVPRSQALQLDKAGVRTGKNGAVQVDAYSKTSVDNIYAIGDVTNRVMLTPVAI 359
Query: 367 EDGVACVE-FLAGKHGHVDYDKVPGVVYTHPEVASVGKTEEQVK---ELGVEYRVGKFPF 422
+G A VE GK D+ KV V++ P + + G TEE+ E Y P
Sbjct: 360 NEGAAFVETVFGGKPRATDHTKVACAVFSIPPIGTCGMTEEEAAKNYETVAVYASSFTPL 419
Query: 423 LANSRAKAIDDAEGIVKILAEKETDKILGVHIMAPNAGELIHEAAMA 469
+ N E +++I+ + ++LGVH++ +A E+I +
Sbjct: 420 MHNISGS--KHKEFMIRIITNESNGEVLGVHMLGDSAPEIIQSVGIC 464
>pdb|2X50|A Chain A, Crystal Structure Of Trypanothione Reductase From
Leishmania Infantum In Complex With Nadph And Silver
pdb|2X50|B Chain B, Crystal Structure Of Trypanothione Reductase From
Leishmania Infantum In Complex With Nadph And Silver
Length = 510
Score = 130 bits (326), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 111/407 (27%), Positives = 189/407 (46%), Gaps = 23/407 (5%)
Query: 77 ALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFS--SVEVDLPAMMAQKDKAVSN 134
ALGGTC+NVGC+P K L+ + Y + + G + S+ + ++A K+K V++
Sbjct: 67 ALGGTCVNVGCVPKK-LMVTGAQYMDLIRESGGFGWEMDRESLCPNWKTLIAAKNKVVNS 125
Query: 135 LTRGIEGLFKKNK-VTYVKGYGKFISPSEVSVDTIEGGNT----VVKGKNIIIATGSDVK 189
+ + +F + +++ G+G V V E ++ + + I+IATGS
Sbjct: 126 INESYKSMFADTEGLSFHMGFGALQDAHTVVVRKSEDPHSDVLETLDTEYILIATGSWPT 185
Query: 190 SLPGITIDEKRIVSSTGALALNEVPKKLVVIGAGYIGLEMGSV---WARLGSEVTVVEFA 246
L G+ DE ++S A L + PK+++ +G GYI +E + + G V +
Sbjct: 186 RL-GVPGDE-FCITSNEAFYLEDAPKRMLCVGGGYIAVEFAGIFNGYKPCGGYVDLCYRG 243
Query: 247 ADIVPSMDGEIRKQFQRSLEKQKMKFMLKTKVVGVDLSGDGVKLTLEPAAGGEKTILEAD 306
I+ D E+RK + L ++ + + DG + G E+ + D
Sbjct: 244 DLILRGFDTEVRKSLTKQLGANGIRVRTNLNPTKITKNEDGSN-HVHFNDGTEE---DYD 299
Query: 307 VVLVSAGRTPFTAGLGLDKIGVETDKMGRIPVNERFATNIPGVYAIGDVIPGPMLAHKAE 366
V+++ GR P + L LDK GV T K G + V+ T++ +YAIGDV ML A
Sbjct: 300 QVMLAIGRVPRSQALQLDKAGVRTGKNGAVQVDAYSKTSVDNIYAIGDVTNRVMLTPVAI 359
Query: 367 EDGVACVE-FLAGKHGHVDYDKVPGVVYTHPEVASVGKTEEQVK---ELGVEYRVGKFPF 422
+G A VE GK D+ KV V++ P + + G TEE+ E Y P
Sbjct: 360 NEGAAFVETVFGGKPRATDHTKVACAVFSIPPIGTCGMTEEEAAKNYETVAVYASSFTPL 419
Query: 423 LANSRAKAIDDAEGIVKILAEKETDKILGVHIMAPNAGELIHEAAMA 469
+ N E +++I+ + ++LGVH++ +A E+I +
Sbjct: 420 MHNISGS--KHKEFMIRIITNESNGEVLGVHMLGDSAPEIIQSVGIC 464
>pdb|3DGZ|A Chain A, Crystal Structure Of Mouse Mitochondrial Thioredoxin
Reductase, C- Terminal 3-Residue Truncation
Length = 488
Score = 128 bits (322), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 121/429 (28%), Positives = 197/429 (45%), Gaps = 21/429 (4%)
Query: 58 AAIKAAQLGLKTTCIE--------KRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFAS 109
A +AAQLG K + + LGGTC+NVGCIP K L+H + + +
Sbjct: 21 CAKEAAQLGKKVAVADYVEPSPRGTKWGLGGTCVNVGCIPKK-LMHQAALLGGMIRDAHH 79
Query: 110 HGVKFSS-VEVDLPAMMAQKDKAVSNLTRGIEGLFKKNKVTYVKGYGKFISPSEVSVDTI 168
+G + + V+ + M V +L G + KV Y F+ V
Sbjct: 80 YGWEVAQPVQHNWKTMAEAVQNHVKSLNWGHRVQLQDRKVKYFNIKASFVDEHTVRGVDK 139
Query: 169 EGGNTVVKGKNIIIATGSDVKSLPGITIDEKRIVSSTGALALNEVPKKLVVIGAGYIGLE 228
G T++ ++I+IATG + + + ++S L E P K +V+GA Y+ LE
Sbjct: 140 GGKATLLSAEHIVIATGGRPRYPTQVKGALEYGITSDDIFWLKESPGKTLVVGASYVALE 199
Query: 229 MGSVWARLGSEVTVVEFAADIVPSMDGEIRKQFQRSLEKQKMKFMLKTKVVGV-DLSGDG 287
+G + TV+ + + D ++ +E +F+ + L +
Sbjct: 200 CAGFLTGIGLDTTVMMRSIPLR-GFDQQMSSLVTEHMESHGTQFLKGCVPSHIKKLPTNQ 258
Query: 288 VKLTLEPAAGGEKTILEADVVLVSAGRTPFTAGLGLDKIGVETD-KMGRIPVNERFATNI 346
+++T E A G++ D VL + GR P T L L+K G+ T+ K +I V+ + AT++
Sbjct: 259 LQVTWEDHASGKEDTGTFDTVLWAIGRVPETRTLNLEKAGISTNPKNQKIIVDAQEATSV 318
Query: 347 PGVYAIGDVIPG-PMLAHKAEEDGVACVEFLAGKHGHV-DYDKVPGVVYTHPEVASVGKT 404
P +YAIGDV G P L A + G + L GK + DY VP V+T E VG +
Sbjct: 319 PHIYAIGDVAEGRPELTPTAIKAGKLLAQRLFGKSSTLMDYSNVPTTVFTPLEYGCVGLS 378
Query: 405 EEQVKEL----GVEYRVGKFPFLANSRAKAIDDAEGIVKILAEKETDK-ILGVHIMAPNA 459
EE+ L VE + L + A D ++ +K++ +E + +LG+H + PNA
Sbjct: 379 EEEAVALHGQEHVEVYHAYYKPLEFTVADR-DASQCYIKMVCMREPPQLVLGLHFLGPNA 437
Query: 460 GELIHEAAM 468
GE+ A+
Sbjct: 438 GEVTQGFAL 446
>pdb|1ZDL|A Chain A, Crystal Structure Of Mouse Thioredoxin Reductase Type 2
pdb|1ZKQ|A Chain A, Crystal Structure Of Mouse Thioredoxin Reductase Type 2
Length = 517
Score = 128 bits (322), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 121/429 (28%), Positives = 197/429 (45%), Gaps = 21/429 (4%)
Query: 58 AAIKAAQLGLKTTCIE--------KRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFAS 109
A +AAQLG K + + LGGTC+NVGCIP K L+H + + +
Sbjct: 47 CAKEAAQLGKKVAVADYVEPSPRGTKWGLGGTCVNVGCIPKK-LMHQAALLGGMIRDAHH 105
Query: 110 HGVKFSS-VEVDLPAMMAQKDKAVSNLTRGIEGLFKKNKVTYVKGYGKFISPSEVSVDTI 168
+G + + V+ + M V +L G + KV Y F+ V
Sbjct: 106 YGWEVAQPVQHNWKTMAEAVQNHVKSLNWGHRVQLQDRKVKYFNIKASFVDEHTVRGVDK 165
Query: 169 EGGNTVVKGKNIIIATGSDVKSLPGITIDEKRIVSSTGALALNEVPKKLVVIGAGYIGLE 228
G T++ ++I+IATG + + + ++S L E P K +V+GA Y+ LE
Sbjct: 166 GGKATLLSAEHIVIATGGRPRYPTQVKGALEYGITSDDIFWLKESPGKTLVVGASYVALE 225
Query: 229 MGSVWARLGSEVTVVEFAADIVPSMDGEIRKQFQRSLEKQKMKFMLKTKVVGV-DLSGDG 287
+G + TV+ + + D ++ +E +F+ + L +
Sbjct: 226 CAGFLTGIGLDTTVMMRSIPLR-GFDQQMSSLVTEHMESHGTQFLKGCVPSHIKKLPTNQ 284
Query: 288 VKLTLEPAAGGEKTILEADVVLVSAGRTPFTAGLGLDKIGVETD-KMGRIPVNERFATNI 346
+++T E A G++ D VL + GR P T L L+K G+ T+ K +I V+ + AT++
Sbjct: 285 LQVTWEDHASGKEDTGTFDTVLWAIGRVPETRTLNLEKAGISTNPKNQKIIVDAQEATSV 344
Query: 347 PGVYAIGDVIPG-PMLAHKAEEDGVACVEFLAGKHGHV-DYDKVPGVVYTHPEVASVGKT 404
P +YAIGDV G P L A + G + L GK + DY VP V+T E VG +
Sbjct: 345 PHIYAIGDVAEGRPELTPTAIKAGKLLAQRLFGKSSTLMDYSNVPTTVFTPLEYGCVGLS 404
Query: 405 EEQVKEL----GVEYRVGKFPFLANSRAKAIDDAEGIVKILAEKETDK-ILGVHIMAPNA 459
EE+ L VE + L + A D ++ +K++ +E + +LG+H + PNA
Sbjct: 405 EEEAVALHGQEHVEVYHAYYKPLEFTVADR-DASQCYIKMVCMREPPQLVLGLHFLGPNA 463
Query: 460 GELIHEAAM 468
GE+ A+
Sbjct: 464 GEVTQGFAL 472
>pdb|3L8K|A Chain A, Crystal Structure Of A Dihydrolipoyl Dehydrogenase From
Sulfolobus Solfataricus
pdb|3L8K|B Chain B, Crystal Structure Of A Dihydrolipoyl Dehydrogenase From
Sulfolobus Solfataricus
Length = 466
Score = 126 bits (317), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 111/415 (26%), Positives = 197/415 (47%), Gaps = 40/415 (9%)
Query: 73 EKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSVEVDLPAMMAQKDKAV 132
+ +G LGG CL GC+PSK + E + + A ++V++ L Q K
Sbjct: 34 DPKGELGGNCLYSGCVPSKTV-------REVIQT-AWRLTNIANVKIPLDFSTVQDRKDY 85
Query: 133 SNLTRGIEGLFKKNK--------VTYVKGYGKFISPSEVSVDTIEGGNTVVKGKNIIIAT 184
R FK++K +T+ KGY K P+ V V T EG + + +IIA+
Sbjct: 86 VQELR-----FKQHKRNMSQYETLTFYKGYVKIKDPTHVIVKTDEGKEIEAETRYMIIAS 140
Query: 185 GSDVKSL--PGITIDEKRIVSSTGAL----ALNEVPKKLVVIGAGYIGLEMGSVWARLGS 238
G++ L PG+ + ++S + ++P+ +V+IGAGYIGLE+ S++ +G
Sbjct: 141 GAETAKLRLPGV----EYCLTSDDIFGYKTSFRKLPQDMVIIGAGYIGLEIASIFRLMGV 196
Query: 239 EVTVVEFAADIVPSMDGEIRKQFQRSLEKQKMKFMLKTKVVGVD-LSGDGVKLTLEPAAG 297
+ ++E + +++ + S+ K +KF + V V + D ++ G
Sbjct: 197 QTHIIEMLDRALITLEDQDIVNTLLSILKLNIKF--NSPVTEVKKIKDDEYEVIYSTKDG 254
Query: 298 GEKTILEADVVLVSAGRTPFTAGLGLDKIGVETDKMGRIPVNERFATNIPGVYAIGDVIP 357
+K+I VVL +AGR P G +IG+ K G I V+E TNIP V+A GD
Sbjct: 255 SKKSIFTNSVVL-AAGRRPVIPE-GAREIGLSISKTG-IVVDETMKTNIPNVFATGDANG 311
Query: 358 GPMLAHKAEEDGVACVEFLAGKHGHVDY---DKVPGVVYTHPEVASVGKTEEQVKELGVE 414
H A +A + VDY +P +YT P ++ VG + +++G+E
Sbjct: 312 LAPYYHAAVRMSIAAANNIMANGMPVDYVDVKSIPVTIYTIPSLSYVGILPSKARKMGIE 371
Query: 415 YRVGKFPFLANSRAKAIDDAEGIVKILAEKETDKILGVHIMAPNAGELIHEAAMA 469
++ + A+ EG++K++ E+ + +++G ++ ++ LI+E +A
Sbjct: 372 IVEAEYNMEEDVSAQIYGQKEGVLKLIFERGSMRLIGAWMIGVHSQYLINELGLA 426
>pdb|1XDI|A Chain A, Crystal Structure Of Lpda (Rv3303c) From Mycobacterium
Tuberculosis
pdb|1XDI|B Chain B, Crystal Structure Of Lpda (Rv3303c) From Mycobacterium
Tuberculosis
Length = 499
Score = 125 bits (313), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 104/415 (25%), Positives = 184/415 (44%), Gaps = 16/415 (3%)
Query: 68 KTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHS--FASHGVKFSSVEVDLPAMM 125
+ T I+ G +GG + C+PSK + S+ + E + H + F ++ LP +
Sbjct: 30 QVTVIDCDG-IGGAAVLDDCVPSKTFIASTGLRTELRRAPHLGFH-IDFDDAKISLPQIH 87
Query: 126 AQKDKAVSNLTRGIEGLFKKNKVTYVKGYGKFISPS------EVSVDTIEGGNTVVKGKN 179
A+ + + I V + G G+ I + + +G + +
Sbjct: 88 ARVKTLAAAQSADITAQLLSMGVQVIAGRGELIDSTPGLARHRIKATAADGSTSEHEADV 147
Query: 180 IIIATGSDVKSLPGITIDEKRIVSSTGALALNEVPKKLVVIGAGYIGLEMGSVWARLGSE 239
+++ATG+ + LP D +RI++ L+ +P L+V+G+G G E + LG
Sbjct: 148 VLVATGASPRILPSAQPDGERILTWRQLYDLDALPDHLIVVGSGVTGAEFVDAYTELGVP 207
Query: 240 VTVVEFAADIVPSMDGEIRKQFQRSLEKQKMKFMLKTKVVGVDLSGDGVKLTLEPAAGGE 299
VTVV ++P D + + S ++ ++ + V +G GV +T+ +
Sbjct: 208 VTVVASQDHVLPYEDADAALVLEESFAERGVRLFKNARAASVTRTGAGVLVTMT-----D 262
Query: 300 KTILEADVVLVSAGRTPFTAGLGLDKIGVETDKMGRIPVNERFATNIPGVYAIGDVIPGP 359
+E L++ G P T+GLGL+++G++ + + V+ T G+YA GD
Sbjct: 263 GRTVEGSHALMTIGSVPNTSGLGLERVGIQLGRGNYLTVDRVSRTLATGIYAAGDCTGLL 322
Query: 360 MLAHKAEEDG-VACVEFLAGKHGHVDYDKVPGVVYTHPEVASVGKTEEQVKELGVEYRVG 418
LA A G +A L + V V+T PE+A+VG + + V R
Sbjct: 323 PLASVAAMQGRIAMYHALGEGVSPIRLRTVAATVFTRPEIAAVGVPQSVIDAGSVAARTI 382
Query: 419 KFPFLANSRAKAIDDAEGIVKILAEKETDKILGVHIMAPNAGELIHEAAMATHDK 473
P N+RAK + G VKI + T ++G ++AP A ELI A+A ++
Sbjct: 383 MLPLRTNARAKMSEMRHGFVKIFCRRSTGVVIGGVVVAPIASELILPIAVAVQNR 437
>pdb|4B1B|A Chain A, Crystal Structure Of Plasmodium Falciparum Oxidised
Thioredoxin Reductase At 2.9 Angstrom
pdb|4B1B|B Chain B, Crystal Structure Of Plasmodium Falciparum Oxidised
Thioredoxin Reductase At 2.9 Angstrom
Length = 542
Score = 119 bits (298), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 113/419 (26%), Positives = 193/419 (46%), Gaps = 31/419 (7%)
Query: 75 RGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSVEVDLPAMMAQKDKAVSN 134
+ +GGTC+NVGC+P K + ++ HM ++G KF +++ D ++ + +
Sbjct: 82 KWGIGGTCVNVGCVPKKLMHYAGHMGSIFKLDSKAYGWKFDNLKHDWKKLVTTVQSHIRS 141
Query: 135 LTRGIEGLFKKNKVTYVKGYGKFISPSEVSVDTIEGG---NTVVKGKNIIIATGSDVKSL 191
L + +KV Y+ G K + VS ++G V GK I+IATG
Sbjct: 142 LNFSYMTGLRSSKVKYINGLAKLKDKNTVSY-YLKGDLSKEETVTGKYILIATGCRPHIP 200
Query: 192 PGITIDEKRIVSSTGALALNEVPKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIVP 251
+ ++ ++S +L + P K +V+GA Y+ LE LG +VTV + ++
Sbjct: 201 DDVEGAKELSITSDDIFSLKKDPGKTLVVGASYVALECSGFLNSLGYDVTVA-VRSIVLR 259
Query: 252 SMDGEIRKQFQRSLEKQKMKFMLKTKVVGVDLSGDGVKLTLEPAAGGEKTILEADVVLVS 311
D + + + +E+Q + M K ++ L+ K+ +E + +KT D VL +
Sbjct: 260 GFDQQCAVKVKLYMEEQGV--MFKNGILPKKLTKMDDKILVEFS---DKTSELYDTVLYA 314
Query: 312 AGRTPFTAGLGLDKIGVETDKM-GRIPVNERFATNIPGVYAIGDVIPG-PMLAHKAEEDG 369
GR GL L+ + + +K +I + TNIP ++A+GDV P LA A + G
Sbjct: 315 IGRKGDIDGLNLESLNMNVNKSNNKIIADHLSCTNIPSIFAVGDVAENVPELAPVAIKAG 374
Query: 370 VACVEFLAGKHGHV-DYDKVPGVVYTHPEVASVGKTEEQVKEL----GVEYRVGKFPFL- 423
L + DY +P +YT E + G +EE+ EL VE + +F L
Sbjct: 375 EILARRLFKDSDEIMDYSYIPTSIYTPIEYGACGYSEEKAYELYGKSNVEVFLQEFNNLE 434
Query: 424 --ANSRAKAID----------DAEGIVKILAEK-ETDKILGVHIMAPNAGELIHEAAMA 469
A R K I + + K++ K E ++++G H + PNAGE+ A+A
Sbjct: 435 ISAVHRQKHIRAQKDEYDLDVSSTCLAKLVCLKNEDNRVIGFHYVGPNAGEVTQGMALA 493
>pdb|1ONF|A Chain A, Crystal Structure Of Plasmodium Falciparum Glutathione
Reductase
Length = 500
Score = 112 bits (280), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 109/454 (24%), Positives = 202/454 (44%), Gaps = 64/454 (14%)
Query: 68 KTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHG--VKFSSVEVDLPAMM 125
K +EK LGGTC+NVGC+P K + +++ + H+ + + +G KFS +LP ++
Sbjct: 27 KVALVEK-SRLGGTCVNVGCVPKKIMFNAASV-HDILENSRHYGFDTKFS---FNLPLLV 81
Query: 126 AQKDKAVSNLTRGIEGLFKKNKVTYVKGYGKFISPSEVSVDTIEGGNT---------VVK 176
++DK + L K+KV +G F+S + + + + N +++
Sbjct: 82 ERRDKYIQRLNNIYRQNLSKDKVDLYEGTASFLSENRILIKGTKDNNNKDNGPLNEEILE 141
Query: 177 GKNIIIATGSDVKSLPGITIDEKRIVSSTGALALNEVPKKLVVIGAGYIGLEMGSVWARL 236
G+NI+IA G+ P I+ +SS + E KK+ ++G+GYI +E+ +V RL
Sbjct: 142 GRNILIAVGNKPVFPPVKGIE--NTISSDEFFNIKE-SKKIGIVGSGYIAVELINVIKRL 198
Query: 237 GSEVTVVEFAADIVPSMDGEIRKQFQRSLEKQKMKFMLKTKVVGVDLSGDGVKLTLEPAA 296
G + + I+ D + + ++K + + VV + D L++ +
Sbjct: 199 GIDSYIFARGNRILRKFDESVINVLENDMKKNNINIVTFADVVEIKKVSDK-NLSIHLSD 257
Query: 297 GGEKTILEADVVLVSAGRTPFTAGLGLDKIGVETDKMGRIPVNERFATNIPGVYAIGD-- 354
G + D V+ GR+P T L L+K+ VET+ I V+E T++ +YA+GD
Sbjct: 258 G--RIYEHFDHVIYCVGRSPDTENLKLEKLNVETNN-NYIVVDENQRTSVNNIYAVGDCC 314
Query: 355 ---------------VIPGPMLAHKAE---EDGVACVE---------------FLAGKHG 381
+ +K E ED V+ K
Sbjct: 315 MVKKSKEIEDLNLLKLYNEERYLNKKENVTEDIFYNVQLTPVAINAGRLLADRLFLKKTR 374
Query: 382 HVDYDKVPGVVYTHPEVASVGKTEEQVKEL----GVEYRVGKFP--FLANSRAKAIDDAE 435
+Y +P V+++HP + ++G +EE ++ V+ KF F + + +
Sbjct: 375 KTNYKLIPTVIFSHPPIGTIGLSEEAAIQIYGKENVKIYESKFTNLFFSVYDIEPELKEK 434
Query: 436 GIVKILAEKETDKILGVHIMAPNAGELIHEAAMA 469
+K++ + + I G+HI+ NA E++ A+A
Sbjct: 435 TYLKLVCVGKDELIKGLHIIGLNADEIVQGFAVA 468
>pdb|1MO9|A Chain A, Nadph Dependent 2-Ketopropyl Coenzyme M
OxidoreductaseCARBOXYLASE Complexed With 2-Ketopropyl
Coenzyme M
pdb|1MO9|B Chain B, Nadph Dependent 2-Ketopropyl Coenzyme M
OxidoreductaseCARBOXYLASE Complexed With 2-Ketopropyl
Coenzyme M
pdb|1MOK|A Chain A, Nadph Dependent 2-Ketopropyl Coenzyme M
OxidoreductaseCARBOXYLASE
pdb|1MOK|B Chain B, Nadph Dependent 2-Ketopropyl Coenzyme M
OxidoreductaseCARBOXYLASE
pdb|1MOK|C Chain C, Nadph Dependent 2-Ketopropyl Coenzyme M
OxidoreductaseCARBOXYLASE
pdb|1MOK|D Chain D, Nadph Dependent 2-Ketopropyl Coenzyme M
OxidoreductaseCARBOXYLASE
pdb|2C3D|A Chain A, 2.15 Angstrom Crystal Structure Of 2-Ketopropyl Coenzyme M
Oxidoreductase Carboxylase With A Coenzyme M Disulfide
Bound At The Active Site
pdb|2C3D|B Chain B, 2.15 Angstrom Crystal Structure Of 2-Ketopropyl Coenzyme M
Oxidoreductase Carboxylase With A Coenzyme M Disulfide
Bound At The Active Site
pdb|2C3C|A Chain A, 2.01 Angstrom X-Ray Crystal Structure Of A Mixed Disulfide
Between Coenzyme M And Nadph-Dependent Oxidoreductase 2-
Ketopropyl Coenzyme M Carboxylase
pdb|2C3C|B Chain B, 2.01 Angstrom X-Ray Crystal Structure Of A Mixed Disulfide
Between Coenzyme M And Nadph-Dependent Oxidoreductase 2-
Ketopropyl Coenzyme M Carboxylase
pdb|3Q6J|A Chain A, Structural Basis For Carbon Dioxide Binding By
2-Ketopropyl Coenzyme M OxidoreductaseCARBOXYLASE
pdb|3Q6J|B Chain B, Structural Basis For Carbon Dioxide Binding By
2-Ketopropyl Coenzyme M OxidoreductaseCARBOXYLASE
Length = 523
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 102/420 (24%), Positives = 171/420 (40%), Gaps = 47/420 (11%)
Query: 65 LGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSVEVDLPAM 124
+G + +++ LGG+C + C+P H++ + + S + P M
Sbjct: 65 MGGRQLIVDRWPFLGGSCPHNACVPH-------HLFSDCAAELML--ARTFSGQYWFPDM 115
Query: 125 MAQ--KDKAVSNLTR----GIEGLFKKNKVTYVKGYGKFISPSEV-SVDTIEGGNTVVKG 177
+ K V +L R G G+ + P++V T+E V K
Sbjct: 116 TEKVVGIKEVVDLFRAGRNGPHGIMNFQSKEQLNLEYILNCPAKVIDNHTVEAAGKVFKA 175
Query: 178 KNIIIATGSDVKSL--PGIT----IDEKRIVSSTGALALNEVP-KKLVVIGAGYIGLEMG 230
KN+I+A G+ +L PG+ D +V L+ P +VV+G +E G
Sbjct: 176 KNLILAVGAGPGTLDVPGVNAKGVFDHATLVEE-----LDYEPGSTVVVVGGSKTAVEYG 230
Query: 231 SVWARLGSEVTVVEFAADIVPSMDGEIRKQFQRSLEKQKMKFMLKTKVVGVDLSGDG-VK 289
+ G ++ + D E R +++Q M+ + + V ++ +G V+
Sbjct: 231 CFFNATGRRTVMLVRTEPLKLIKDNETRAYVLDRMKEQGMEIISGSNVTRIEEDANGRVQ 290
Query: 290 LTLEPAAGGEKTILEADVVLVSAGRTPFTAGLGLDKIGVETDKMGRIPVNERFATNIPGV 349
+ GE I E D V + G P +A L +G++ G + VNE T++P V
Sbjct: 291 AVVAMTPNGEMRI-ETDFVFLGLGEQPRSAELA-KILGLDLGPKGEVLVNEYLQTSVPNV 348
Query: 350 YAIGDVIPGPMLAHKAEEDGVACVEFLAGKHGHVDYDKVPGVVYTHPEVASVGKTEEQVK 409
YA+GD+I GPM KA + G + G+ P ++TH EV+ +G EE+ +
Sbjct: 349 YAVGDLIGGPMEMFKARKSGCYAARNVMGEKISYTPKNYPDFLHTHYEVSFLGMGEEEAR 408
Query: 410 ELGVEYRVGKFP----------FLANSRA------KAIDDAEGIVKILAEKETDKILGVH 453
G E K P A+ R K G KI+ + +T K+LG H
Sbjct: 409 AAGHEIVTIKMPPDTENGLNVALPASDRTMLYAFGKGTAHMSGFQKIVIDAKTRKVLGAH 468
>pdb|3ICR|A Chain A, Crystal Structure Of Oxidized Bacillus Anthracis Coadr-Rhd
pdb|3ICR|B Chain B, Crystal Structure Of Oxidized Bacillus Anthracis Coadr-Rhd
pdb|3ICS|A Chain A, Crystal Structure Of Partially Reduced Bacillus Anthracis
Coadr-Rhd
pdb|3ICS|B Chain B, Crystal Structure Of Partially Reduced Bacillus Anthracis
Coadr-Rhd
pdb|3ICT|A Chain A, Crystal Structure Of Reduced Bacillus Anthracis Coadr-Rhd
pdb|3ICT|B Chain B, Crystal Structure Of Reduced Bacillus Anthracis Coadr-Rhd
Length = 588
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 72/261 (27%), Positives = 113/261 (43%), Gaps = 36/261 (13%)
Query: 214 PKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIVPSMDGEIRKQFQRSLEKQKMKFM 273
P+ VIG G+IG+E G EVT+VE A + P +D E + ++ +
Sbjct: 187 PRHATVIGGGFIGVEXVENLRERGIEVTLVEXANQVXPPIDYEXAAYVHEHXKNHDVELV 246
Query: 274 LKTKVVGVDLSGDGVKLTLEPAAGGEKTILEADVVLVSAGRTP---FTAGLGLDKIGVET 330
+ V ++ +G V+L ++++ D ++++ G P G GL +GV
Sbjct: 247 FEDGVDALEENGAVVRLK-------SGSVIQTDXLILAIGVQPESSLAKGAGL-ALGVR- 297
Query: 331 DKMGRIPVNERFATNIPGVYAIGDVI----------PGPMLAHKAEEDGVACVEFLAGKH 380
G I VNE+F T+ P +YAIGD I LA A G + + H
Sbjct: 298 ---GTIKVNEKFQTSDPHIYAIGDAIEVKDFVTETETXIPLAWPANRQGRXLADII---H 351
Query: 381 GHVD--YDKVPGVVYTHP---EVASVGKTEEQVKELGVEYRVGKFPFLANSRAKAIDDAE 435
GH D Y G VA+ G E+ +K L + Y V ANS A +A
Sbjct: 352 GHTDSLYKGTLGTSVAKVFDLTVATTGLNEKILKRLNIPYEV--VHVQANSHAGYYPNAT 409
Query: 436 GI-VKILAEKETDKILGVHIM 455
+ +K++ K++ KI G +
Sbjct: 410 PVLIKLIFNKDSGKIYGAQTL 430
>pdb|3IWA|A Chain A, Crystal Structure Of A Fad-Dependent Pyridine
Nucleotide-Disulphide Oxidoreductase From Desulfovibrio
Vulgaris
Length = 472
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 66/205 (32%), Positives = 98/205 (47%), Gaps = 23/205 (11%)
Query: 170 GGNTVVKGKNIIIATGSDVKSLP-------GIT----IDEKRIVSSTGALALNEVPKKLV 218
G +K +++A GS P G+T +DE V A++ EV K V
Sbjct: 107 GERRTLKYDKLVLALGSKANRPPVEGMDLAGVTPVTNLDEAEFVQH--AISAGEV-SKAV 163
Query: 219 VIGAGYIGLEMGSVWARL-GSEVTVVEFAADIVPSMDGEIRKQFQR-SLEKQKMKFMLKT 276
++G G+IGLEM A + G + TVVE A I+P + Q R LEK +
Sbjct: 164 IVGGGFIGLEMAVSLADMWGIDTTVVELADQIMPGFTSKSLSQMLRHDLEKNDVVVHTGE 223
Query: 277 KVVGVDLSGDGVKLTLEPAAGGEKTILEADVVLVSAGRTPFTAGLGLDKIGVETDKMGRI 336
KVV ++ V + +K L+AD+V+++AG +P T L D G+E D G I
Sbjct: 224 KVVRLEGENGKVARVIT-----DKRTLDADLVILAAGVSPNTQ-LARDA-GLELDPRGAI 276
Query: 337 PVNERFATNIPGVYAIGDVIPGPML 361
V+ R T+ P ++A GD + P L
Sbjct: 277 IVDTRMRTSDPDIFAGGDCVTIPNL 301
>pdb|4EQX|A Chain A, Crystal Structure Of The C43s Mutant Of Staphylococcus
Aureus Coadr
pdb|4EQX|B Chain B, Crystal Structure Of The C43s Mutant Of Staphylococcus
Aureus Coadr
Length = 437
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 81/165 (49%), Gaps = 15/165 (9%)
Query: 216 KLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIVPSMDGEIRKQFQRSLEKQKMKFMLK 275
K++V+GAGY+ LE+ G T++ + I MD ++ + L+K+++ + L
Sbjct: 149 KVLVVGAGYVSLEVLENLYERGLHPTLIHRSDKINKLMDADMNQPILDELDKREIPYRLN 208
Query: 276 TKVVGVDLSGDGVKLTLEPAAGGEKTILEADVVLVSAGRTPFTAGLGLDKIGVETDKMGR 335
++ ++ G ++T + + D+++ G P + + + ++ D+ G
Sbjct: 209 EEINAIN----GNEITFKSGK-----VEHYDMIIEGVGTHPNSKFI--ESSNIKLDRKGF 257
Query: 336 IPVNERFATNIPGVYAIGDVIPGPMLAHKAEEDGVACVEFLAGKH 380
IPVN++F TN+P +YAIGD+ +H D A V G H
Sbjct: 258 IPVNDKFETNVPNIYAIGDI----ATSHYRHVDLPASVPLAWGAH 298
>pdb|1YQZ|A Chain A, Structure Of Coenzyme A-Disulfide Reductase From
Staphylococcus Aureus Refined At 1.54 Angstrom
Resolution
pdb|1YQZ|B Chain B, Structure Of Coenzyme A-Disulfide Reductase From
Staphylococcus Aureus Refined At 1.54 Angstrom
Resolution
Length = 438
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 81/165 (49%), Gaps = 15/165 (9%)
Query: 216 KLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIVPSMDGEIRKQFQRSLEKQKMKFMLK 275
K++V+GAGY+ LE+ G T++ + I MD ++ + L+K+++ + L
Sbjct: 150 KVLVVGAGYVSLEVLENLYERGLHPTLIHRSDKINKLMDADMNQPILDELDKREIPYRLN 209
Query: 276 TKVVGVDLSGDGVKLTLEPAAGGEKTILEADVVLVSAGRTPFTAGLGLDKIGVETDKMGR 335
++ ++ G ++T + + D+++ G P + + + ++ D+ G
Sbjct: 210 EEINAIN----GNEITFKSGK-----VEHYDMIIEGVGTHPNSKFI--ESSNIKLDRKGF 258
Query: 336 IPVNERFATNIPGVYAIGDVIPGPMLAHKAEEDGVACVEFLAGKH 380
IPVN++F TN+P +YAIGD+ +H D A V G H
Sbjct: 259 IPVNDKFETNVPNIYAIGDI----ATSHYRHVDLPASVPLAWGAH 299
>pdb|4EMW|A Chain A, Crystal Structure Of Staphylococcus Aureus Bound With The
Covalent Inhibitor Etvc-Coa
pdb|4EMW|B Chain B, Crystal Structure Of Staphylococcus Aureus Bound With The
Covalent Inhibitor Etvc-Coa
Length = 436
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 81/165 (49%), Gaps = 15/165 (9%)
Query: 216 KLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIVPSMDGEIRKQFQRSLEKQKMKFMLK 275
K++V+GAGY+ LE+ G T++ + I MD ++ + L+K+++ + L
Sbjct: 149 KVLVVGAGYVSLEVLENLYERGLHPTLIHRSDKINKLMDADMNQPILDELDKREIPYRLN 208
Query: 276 TKVVGVDLSGDGVKLTLEPAAGGEKTILEADVVLVSAGRTPFTAGLGLDKIGVETDKMGR 335
++ ++ G ++T + + D+++ G P + + + ++ D+ G
Sbjct: 209 EEINAIN----GNEITFKSGK-----VEHYDMIIEGVGTHPNSKFI--ESSNIKLDRKGF 257
Query: 336 IPVNERFATNIPGVYAIGDVIPGPMLAHKAEEDGVACVEFLAGKH 380
IPVN++F TN+P +YAIGD+ +H D A V G H
Sbjct: 258 IPVNDKFETNVPNIYAIGDI----ATSHYRHVDLPASVPLAWGAH 298
>pdb|4EM3|A Chain A, Crystal Structure Of Staphylococcus Aureus Bound With The
Covalent Inhibitor Mevs-Coa
pdb|4EM3|B Chain B, Crystal Structure Of Staphylococcus Aureus Bound With The
Covalent Inhibitor Mevs-Coa
pdb|4EM4|A Chain A, Crystal Structure Of Staphylococcus Aureus Bound With The
Covalent Inhibitor Pethyl-Vs-Coa
pdb|4EM4|B Chain B, Crystal Structure Of Staphylococcus Aureus Bound With The
Covalent Inhibitor Pethyl-Vs-Coa
Length = 437
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 81/165 (49%), Gaps = 15/165 (9%)
Query: 216 KLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIVPSMDGEIRKQFQRSLEKQKMKFMLK 275
K++V+GAGY+ LE+ G T++ + I MD ++ + L+K+++ + L
Sbjct: 149 KVLVVGAGYVSLEVLENLYERGLHPTLIHRSDKINKLMDADMNQPILDELDKREIPYRLN 208
Query: 276 TKVVGVDLSGDGVKLTLEPAAGGEKTILEADVVLVSAGRTPFTAGLGLDKIGVETDKMGR 335
++ ++ G ++T + + D+++ G P + + + ++ D+ G
Sbjct: 209 EEINAIN----GNEITFKSGK-----VEHYDMIIEGVGTHPNSKFI--ESSNIKLDRKGF 257
Query: 336 IPVNERFATNIPGVYAIGDVIPGPMLAHKAEEDGVACVEFLAGKH 380
IPVN++F TN+P +YAIGD+ +H D A V G H
Sbjct: 258 IPVNDKFETNVPNIYAIGDI----ATSHYRHVDLPASVPLAWGAH 298
>pdb|4EQS|A Chain A, Crystal Structure Of The Y419f Mutant Of Staphylococcus
Aureus Coadr
pdb|4EQS|B Chain B, Crystal Structure Of The Y419f Mutant Of Staphylococcus
Aureus Coadr
Length = 437
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 81/165 (49%), Gaps = 15/165 (9%)
Query: 216 KLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIVPSMDGEIRKQFQRSLEKQKMKFMLK 275
K++V+GAGY+ LE+ G T++ + I MD ++ + L+K+++ + L
Sbjct: 149 KVLVVGAGYVSLEVLENLYERGLHPTLIHRSDKINKLMDADMNQPILDELDKREIPYRLN 208
Query: 276 TKVVGVDLSGDGVKLTLEPAAGGEKTILEADVVLVSAGRTPFTAGLGLDKIGVETDKMGR 335
++ ++ G ++T + + D+++ G P + + + ++ D+ G
Sbjct: 209 EEINAIN----GNEITFKSGK-----VEHYDMIIEGVGTHPNSKFI--ESSNIKLDRKGF 257
Query: 336 IPVNERFATNIPGVYAIGDVIPGPMLAHKAEEDGVACVEFLAGKH 380
IPVN++F TN+P +YAIGD+ +H D A V G H
Sbjct: 258 IPVNDKFETNVPNIYAIGDI----ATSHYRHVDLPASVPLAWGAH 298
>pdb|4EQR|A Chain A, Crystal Structure Of The Y361f Mutant Of Staphylococcus
Aureus Coadr
pdb|4EQR|B Chain B, Crystal Structure Of The Y361f Mutant Of Staphylococcus
Aureus Coadr
Length = 437
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 81/165 (49%), Gaps = 15/165 (9%)
Query: 216 KLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIVPSMDGEIRKQFQRSLEKQKMKFMLK 275
K++V+GAGY+ LE+ G T++ + I MD ++ + L+K+++ + L
Sbjct: 149 KVLVVGAGYVSLEVLENLYERGLHPTLIHRSDKINKLMDADMNQPILDELDKREIPYRLN 208
Query: 276 TKVVGVDLSGDGVKLTLEPAAGGEKTILEADVVLVSAGRTPFTAGLGLDKIGVETDKMGR 335
++ ++ G ++T + + D+++ G P + + + ++ D+ G
Sbjct: 209 EEINAIN----GNEITFKSGK-----VEHYDMIIEGVGTHPNSKFI--ESSNIKLDRKGF 257
Query: 336 IPVNERFATNIPGVYAIGDVIPGPMLAHKAEEDGVACVEFLAGKH 380
IPVN++F TN+P +YAIGD+ +H D A V G H
Sbjct: 258 IPVNDKFETNVPNIYAIGDI----ATSHYRHVDLPASVPLAWGAH 298
>pdb|4EQW|A Chain A, Crystal Structure Of The Y361f, Y419f Mutant Of
Staphylococcus Aureus Coadr
pdb|4EQW|B Chain B, Crystal Structure Of The Y361f, Y419f Mutant Of
Staphylococcus Aureus Coadr
Length = 437
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 81/165 (49%), Gaps = 15/165 (9%)
Query: 216 KLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIVPSMDGEIRKQFQRSLEKQKMKFMLK 275
K++V+GAGY+ LE+ G T++ + I MD ++ + L+K+++ + L
Sbjct: 149 KVLVVGAGYVSLEVLENLYERGLHPTLIHRSDKINKLMDADMNQPILDELDKREIPYRLN 208
Query: 276 TKVVGVDLSGDGVKLTLEPAAGGEKTILEADVVLVSAGRTPFTAGLGLDKIGVETDKMGR 335
++ ++ G ++T + + D+++ G P + + + ++ D+ G
Sbjct: 209 EEINAIN----GNEITFKSGK-----VEHYDMIIEGVGTHPNSKFI--ESSNIKLDRKGF 257
Query: 336 IPVNERFATNIPGVYAIGDVIPGPMLAHKAEEDGVACVEFLAGKH 380
IPVN++F TN+P +YAIGD+ +H D A V G H
Sbjct: 258 IPVNDKFETNVPNIYAIGDI----ATSHYRHVDLPASVPLAWGAH 298
>pdb|2BC0|A Chain A, Structural Analysis Of Streptococcus Pyogenes Nadh
Oxidase: Wild-Type Nox
pdb|2BC0|B Chain B, Structural Analysis Of Streptococcus Pyogenes Nadh
Oxidase: Wild-Type Nox
Length = 490
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 70/264 (26%), Positives = 119/264 (45%), Gaps = 33/264 (12%)
Query: 211 NEVPKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIVPS-MDGEIRKQFQRSLEKQK 269
N+ K++ V+GAGYIG+E+ + R G EV +++ + D ++ +++E+
Sbjct: 191 NKDIKRVAVVGAGYIGVELAEAFQRKGKEVVLIDVVDTCLAGYYDRDLTDLMAKNMEEHG 250
Query: 270 MKFMLKTKVVGVDLSGDGVKLTLEPAAGGEKTILEADVVLVSAGRTPFTAGLGLDKIGVE 329
++ V V +G K+ +K + D+V+++ G P T LG KI +
Sbjct: 251 IQLAFGETVKEVAGNGKVEKIIT------DKNEYDVDMVILAVGFRPNTT-LGNGKI--D 301
Query: 330 TDKMGRIPVNERFATNIPGVYAIGDV----------IPGPMLAHKAEEDGV-----ACVE 374
+ G VN+R T+IPGVYAIGD LA A G+ AC
Sbjct: 302 LFRNGAFLVNKRQETSIPGVYAIGDCATIYDNATRDTNYIALASNAVRTGIVAAHNACGT 361
Query: 375 FLAGKHGHVDYDKVPGVVYTHPEVASVGKTEEQVKELGVEYRVGKFPFLANSRAKAIDDA 434
L G + G+ + S G T E+ K LG + V ++ N + + I+
Sbjct: 362 DLEG----IGVQGSNGISIYGLHMVSTGLTLEKAKRLGFDAAVTEYT--DNQKPEFIEHG 415
Query: 435 EG--IVKILAEKETDKILGVHIMA 456
+KI+ +K++ +ILG + A
Sbjct: 416 NFPVTIKIVYDKDSRRILGAQMAA 439
>pdb|2BC1|A Chain A, Structural Analysis Of Streptococcus Pyogenes Nadh
Oxidase: C44s Nox
pdb|2BC1|B Chain B, Structural Analysis Of Streptococcus Pyogenes Nadh
Oxidase: C44s Nox
pdb|2BCP|A Chain A, Structural Analysis Of Streptococcus Pyogenes Nadh
Oxidase: C44s Nox With Azide
pdb|2BCP|B Chain B, Structural Analysis Of Streptococcus Pyogenes Nadh
Oxidase: C44s Nox With Azide
Length = 490
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 70/264 (26%), Positives = 119/264 (45%), Gaps = 33/264 (12%)
Query: 211 NEVPKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIVPS-MDGEIRKQFQRSLEKQK 269
N+ K++ V+GAGYIG+E+ + R G EV +++ + D ++ +++E+
Sbjct: 191 NKDIKRVAVVGAGYIGVELAEAFQRKGKEVVLIDVVDTCLAGYYDRDLTDLMAKNMEEHG 250
Query: 270 MKFMLKTKVVGVDLSGDGVKLTLEPAAGGEKTILEADVVLVSAGRTPFTAGLGLDKIGVE 329
++ V V +G K+ +K + D+V+++ G P T LG KI +
Sbjct: 251 IQLAFGETVKEVAGNGKVEKIIT------DKNEYDVDMVILAVGFRPNTT-LGNGKI--D 301
Query: 330 TDKMGRIPVNERFATNIPGVYAIGDV----------IPGPMLAHKAEEDGV-----ACVE 374
+ G VN+R T+IPGVYAIGD LA A G+ AC
Sbjct: 302 LFRNGAFLVNKRQETSIPGVYAIGDCATIYDNATRDTNYIALASNAVRTGIVAAHNACGT 361
Query: 375 FLAGKHGHVDYDKVPGVVYTHPEVASVGKTEEQVKELGVEYRVGKFPFLANSRAKAIDDA 434
L G + G+ + S G T E+ K LG + V ++ N + + I+
Sbjct: 362 DLEG----IGVQGSNGISIYGLHMVSTGLTLEKAKRLGFDAAVTEYT--DNQKPEFIEHG 415
Query: 435 EG--IVKILAEKETDKILGVHIMA 456
+KI+ +K++ +ILG + A
Sbjct: 416 NFPVTIKIVYDKDSRRILGAQMAA 439
>pdb|3NTD|A Chain A, Structure Of The Shewanella Loihica Pv-4 Nadh-Dependent
Persulfide Reductase C531s Mutant
pdb|3NTD|B Chain B, Structure Of The Shewanella Loihica Pv-4 Nadh-Dependent
Persulfide Reductase C531s Mutant
Length = 565
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 66/255 (25%), Positives = 112/255 (43%), Gaps = 53/255 (20%)
Query: 197 DEKRIVSSTGALALNEVPKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIVPSMDGE 256
D RI+ + + +N V + V+G G+IGLEM LG + T++E A ++ +D E
Sbjct: 138 DMDRILQT---IQMNNV-EHATVVGGGFIGLEMMESLHHLGIKTTLLELADQVMTPVDRE 193
Query: 257 IRKQFQRSLEKQKMKFMLKTKVVGVDLSGDGVKLTLEPAAGGEKT--------------- 301
+ +++ Q + L T + V V+ + A GE T
Sbjct: 194 MAGFAHQAIRDQGVDLRLGTALSEVSYQ---VQTHVASDAAGEDTAHQHIKGHLSLTLSN 250
Query: 302 --ILEADVVLVSAGRTPFTAGLGLDKIGVETDKMGRIPVNERFATNIPGVYAIGDVIPGP 359
+LE D+++++ G P T L D G+ ++G I VN T+ P +YA+GD +
Sbjct: 251 GELLETDLLIMAIGVRPETQ-LARDA-GLAIGELGGIKVNAMMQTSDPAIYAVGDAV--- 305
Query: 360 MLAHKAEED---GVACVEFLAG---KHGHVDYDKVPGVVYTHP-------------EVAS 400
E+D G AC+ LAG + G + D + G + V +
Sbjct: 306 -----EEQDFVTGQACLVPLAGPANRQGRMAADNMFGREERYQGTQGTAICKVFDLAVGA 360
Query: 401 VGKTEEQVKELGVEY 415
GK E+Q+K+ G+ +
Sbjct: 361 TGKNEKQLKQAGIAF 375
>pdb|3CTY|A Chain A, Crystal Structure Of T. Acidophilum Thioredoxin Reductase
pdb|3CTY|B Chain B, Crystal Structure Of T. Acidophilum Thioredoxin Reductase
Length = 319
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 98/212 (46%), Gaps = 19/212 (8%)
Query: 168 IEGGNTVVKGKNIIIATGSDVKSLPGITIDEKRIVSSTGALALNE----VPKKLVVIGAG 223
IE + K +II TG+ K L G+ + + T + + K++V IG G
Sbjct: 106 IETNDDTYHAKYVIITTGTTHKHL-GVKGESEYFGKGTSYCSTCDGYLFKGKRVVTIGGG 164
Query: 224 YIGLEMGSVWARLGSEVTVVEFAADIVPSMDGEIRKQFQRSLEKQKMKFMLKTKVVGVDL 283
G + VT++E+ +P E + + ++K+ + +++ +V ++
Sbjct: 165 NSGAIAAISMSEYVKNVTIIEY----MPKYMCE--NAYVQEIKKRNIPYIMNAQVT--EI 216
Query: 284 SGDGVKLT---LEPAAGGEKTILEADVVLVSAGRTPFTAGLGLDKIGVETDKMGRIPVNE 340
GDG K+T + GE+ ++E D V + G P T+ L GV+ D+ G I V+
Sbjct: 217 VGDGKKVTGVKYKDRTTGEEKLIETDGVFIYVGLIPQTSFL--KDSGVKLDERGYIVVDS 274
Query: 341 RFATNIPGVYAIGDVIPGPMLAHKAEEDGVAC 372
R T++PGVYA GDV G A A G C
Sbjct: 275 RQRTSVPGVYAAGDVTSGN-FAQIASAVGDGC 305
>pdb|3CGC|A Chain A, Pyridine Nucleotide Complexes With Bacillus Anthracis
Coenzyme A- Disulfide Reductase: A Structural Analysis
Of Dual Nad(p)h Specificity
pdb|3CGC|B Chain B, Pyridine Nucleotide Complexes With Bacillus Anthracis
Coenzyme A- Disulfide Reductase: A Structural Analysis
Of Dual Nad(p)h Specificity
pdb|3CGD|A Chain A, Pyridine Nucleotide Complexes With Bacillus Anthracis
Coenzyme A- Disulfide Reductase: A Structural Analysis
Of Dual Nad(p)h Specificity
pdb|3CGD|B Chain B, Pyridine Nucleotide Complexes With Bacillus Anthracis
Coenzyme A- Disulfide Reductase: A Structural Analysis
Of Dual Nad(p)h Specificity
pdb|3CGE|A Chain A, Pyridine Nucleotide Complexes With Bacillus Anthracis
Coenzyme A- Disulfide Reductase: A Structural Analysis
Of Dual Nad(P)h Specificity
pdb|3CGE|B Chain B, Pyridine Nucleotide Complexes With Bacillus Anthracis
Coenzyme A- Disulfide Reductase: A Structural Analysis
Of Dual Nad(P)h Specificity
Length = 480
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 80/167 (47%), Gaps = 16/167 (9%)
Query: 188 VKSLPGITIDEKRIVSSTGALALNEVPKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAA 247
+K++P D +RI+ + L N+V + + +IG G IGLEM + LG +V ++E
Sbjct: 168 LKTIP----DAERILKT---LETNKV-EDVTIIGGGAIGLEMAETFVELGKKVRMIERND 219
Query: 248 DIVPSMDGEIRKQFQRSLEKQKMKFMLKTKVVGVDLSGDGVKLTLEPAAGGEKTILEADV 307
I DG++ + + +K ++ + V G+ +E G K AD+
Sbjct: 220 HIGTIYDGDMAEYIYKEADKHHIEILTNENVKA--FKGNERVEAVETDKGTYK----ADL 273
Query: 308 VLVSAGRTPFTAGLGLDKIGVETDKMGRIPVNERFATNIPGVYAIGD 354
VLVS G P T L+ + T+ G I VN TN+ VYA GD
Sbjct: 274 VLVSVGVKPNTD--FLEGTNIRTNHKGAIEVNAYMQTNVQDVYAAGD 318
>pdb|3LXD|A Chain A, Crystal Structure Of Ferredoxin Reductase Arr From
Novosphingobium Aromaticivorans
Length = 415
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/197 (29%), Positives = 89/197 (45%), Gaps = 25/197 (12%)
Query: 171 GNTVVKGKNIIIATGSDVKSLPGITID------------EKRIVSSTGALALNEVPKKLV 218
G+ + GK +I ATG D + L + D R+++ A A K V
Sbjct: 103 GSAIEYGK-LIWATGGDPRRLSCVGADLAGVHAVRTKEDADRLMAELDAGA-----KNAV 156
Query: 219 VIGAGYIGLEMGSVWARLGSEVTVVEFAADIVPSMDGEIRKQFQRSLEKQKMKFMLKTKV 278
VIG GYIGLE +V + G VT++E ++ + GE +F ++ E + L+T
Sbjct: 157 VIGGGYIGLEAAAVLTKFGVNVTLLEALPRVLARVAGEALSEFYQA-EHRAHGVDLRTGA 215
Query: 279 VGVDLSGDGVKLTLEPAAGGEKTILEADVVLVSAGRTPFTAGLGLDKIGVETDKMGRIPV 338
+ GDG K+T G +++ AD+V+V G P L I + V
Sbjct: 216 AMDCIEGDGTKVTGVRMQDG--SVIPADIVIVGIGIVPCVGAL----ISAGASGGNGVDV 269
Query: 339 NERFATNIPGVYAIGDV 355
+E T++ VYAIGD
Sbjct: 270 DEFCRTSLTDVYAIGDC 286
>pdb|2Q7V|A Chain A, Crystal Structure Of Deinococcus Radiodurans Thioredoxin
Reductase
pdb|2Q7V|B Chain B, Crystal Structure Of Deinococcus Radiodurans Thioredoxin
Reductase
Length = 325
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 61/195 (31%), Positives = 89/195 (45%), Gaps = 17/195 (8%)
Query: 167 TIEGGNTVVKGKNIIIATGSDVKSL--PGITIDEKRIVSSTGAL-ALNEVPKKLVVIGAG 223
T+ G N + K +I+ATG+D + L PG + VS+ KK+VVIG G
Sbjct: 102 TVRGYNGEYRAKAVILATGADPRKLGIPGEDNFWGKGVSTCATCDGFFYKGKKVVVIGGG 161
Query: 224 YIGLEMGSVWARLGSEVTVVEFAADIVPSMDGEIRKQFQRSLEKQKMKFMLKT---KVVG 280
+E G + EVTV+ + + + R+ KMKF+ T ++ G
Sbjct: 162 DAAVEEGMFLTKFADEVTVIHRRDTLRANKVAQ-----ARAFANPKMKFIWDTAVEEIQG 216
Query: 281 VDLSGDGVKLTLEPAAGGEKTILEADVVLVSAGRTPFTAGLGLDKIGVETDKMGRIPVNE 340
D S GVK L GE + L D V + G P TA + D + + D G + V +
Sbjct: 217 AD-SVSGVK--LRNLKTGEVSELATDGVFIFIGHVPNTAFVK-DTVSLRDD--GYVDVRD 270
Query: 341 RFATNIPGVYAIGDV 355
TNIP ++A GDV
Sbjct: 271 EIYTNIPMLFAAGDV 285
>pdb|4GCM|A Chain A, Crystal Structure Of A Thioredoxine Reductase (Trxb) From
Staphylococcus Aureus Subsp. Aureus Mu50 At 1.80 A
Resolution
pdb|4GCM|B Chain B, Crystal Structure Of A Thioredoxine Reductase (Trxb) From
Staphylococcus Aureus Subsp. Aureus Mu50 At 1.80 A
Resolution
Length = 312
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 89/198 (44%), Gaps = 24/198 (12%)
Query: 168 IEGGNTVVKGKNIIIATGSDVKSL--PGITIDEKRIVS----STGALALNEVPKKLVVIG 221
I GN + K +IIATG++ K + PG R VS GA N K+L VIG
Sbjct: 96 INFGNKELTAKAVIIATGAEYKKIGVPGEQELGGRGVSYCAVCDGAFFKN---KRLFVIG 152
Query: 222 AGYIGLEMGSVWARLGSEVTVVEFAADIVPSMDGEIRKQF---QRSLEKQKMKFMLKTKV 278
G +E G+ + +VT+V E+R Q R+ + K+ F+ +
Sbjct: 153 GGDSAVEEGTFLTKFADKVTIVH--------RRDELRAQRILQDRAFKNDKIDFIWSHTL 204
Query: 279 VGVDLSGDGV-KLTLEPAAGGEKTILEADVVLVSAGRTPFTAGLGLDKIGVETDKMGRIP 337
++ V +TL G + EAD V + G P TA +G+ T+ +G I
Sbjct: 205 KSINEKDGKVGSVTLTSTKDGSEETHEADGVFIYIGXKPLTAPF--KDLGI-TNDVGYIV 261
Query: 338 VNERFATNIPGVYAIGDV 355
+ T++PG++A GDV
Sbjct: 262 TKDDXTTSVPGIFAAGDV 279
>pdb|3CGB|A Chain A, Pyridine Nucleotide Complexes With Bacillus Anthracis
Coenzyme A- Disulfide Reductase: A Structural Analysis
Of Dual Nad(P)h Specificity
pdb|3CGB|B Chain B, Pyridine Nucleotide Complexes With Bacillus Anthracis
Coenzyme A- Disulfide Reductase: A Structural Analysis
Of Dual Nad(P)h Specificity
Length = 480
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/167 (29%), Positives = 77/167 (46%), Gaps = 16/167 (9%)
Query: 188 VKSLPGITIDEKRIVSSTGALALNEVPKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAA 247
+K++P D +RI+ + L N+V + + +IG G IGLE + LG +V +E
Sbjct: 168 LKTIP----DAERILKT---LETNKV-EDVTIIGGGAIGLEXAETFVELGKKVRXIERND 219
Query: 248 DIVPSMDGEIRKQFQRSLEKQKMKFMLKTKVVGVDLSGDGVKLTLEPAAGGEKTILEADV 307
I DG+ + + +K ++ + V G+ +E G K AD+
Sbjct: 220 HIGTIYDGDXAEYIYKEADKHHIEILTNENVKA--FKGNERVEAVETDKGTYK----ADL 273
Query: 308 VLVSAGRTPFTAGLGLDKIGVETDKMGRIPVNERFATNIPGVYAIGD 354
VLVS G P T L+ + T+ G I VN TN+ VYA GD
Sbjct: 274 VLVSVGVKPNTD--FLEGTNIRTNHKGAIEVNAYXQTNVQDVYAAGD 318
>pdb|3OC4|A Chain A, Crystal Structure Of A Pyridine Nucleotide-Disulfide
Family Oxidoreductase From The Enterococcus Faecalis
V583
pdb|3OC4|B Chain B, Crystal Structure Of A Pyridine Nucleotide-Disulfide
Family Oxidoreductase From The Enterococcus Faecalis
V583
Length = 452
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 50/156 (32%), Positives = 75/156 (48%), Gaps = 13/156 (8%)
Query: 205 TGALA---LNEVPKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIVPS-MDGEIRKQ 260
+GALA L E + + VIGAG IG E + V V E +++P D E +
Sbjct: 135 SGALAAVPLLENSQTVAVIGAGPIGXEAIDFLVKXKKTVHVFESLENLLPKYFDKEXVAE 194
Query: 261 FQRSLEKQKMKFMLKTKVVGVDLSGDGVKLTLEPAAGGEKTILEADVVLVSAGRTPFTAG 320
Q+SLEKQ + F + V+G++ + +G+ L E+ I D + + P A
Sbjct: 195 VQKSLEKQAVIFHFEETVLGIEETANGIVL-----ETSEQEI-SCDSGIFALNLHPQLAY 248
Query: 321 LGLDKIGVETDKMGRIPVNERFATNIPGVYAIGDVI 356
L KI D+ I V+ T++P V+AIGD I
Sbjct: 249 LD-KKIQRNLDQT--IAVDAYLQTSVPNVFAIGDCI 281
>pdb|3NT6|A Chain A, Structure Of The Shewanella Loihica Pv-4 Nadh-Dependent
Persulfide Reductase C43sC531S DOUBLE MUTANT
pdb|3NT6|B Chain B, Structure Of The Shewanella Loihica Pv-4 Nadh-Dependent
Persulfide Reductase C43sC531S DOUBLE MUTANT
Length = 574
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 65/255 (25%), Positives = 105/255 (41%), Gaps = 53/255 (20%)
Query: 197 DEKRIVSSTGALALNEVPKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIVPSMDGE 256
D RI+ + + N V + V+G G+IGLE LG + T++E A + +D E
Sbjct: 138 DXDRILQT---IQXNNV-EHATVVGGGFIGLEXXESLHHLGIKTTLLELADQVXTPVDRE 193
Query: 257 IRKQFQRSLEKQKMKFMLKTKVVGVDLSGDGVKLTLEPAAGGEKT--------------- 301
+++ Q + L T + V V+ + A GE T
Sbjct: 194 XAGFAHQAIRDQGVDLRLGTALSEVSYQ---VQTHVASDAAGEDTAHQHIKGHLSLTLSN 250
Query: 302 --ILEADVVLVSAGRTPFTAGLGLDKIGVETDKMGRIPVNERFATNIPGVYAIGDVIPGP 359
+LE D+++ + G P T L D G+ ++G I VN T+ P +YA+GD +
Sbjct: 251 GELLETDLLIXAIGVRPETQ-LARDA-GLAIGELGGIKVNAXXQTSDPAIYAVGDAV--- 305
Query: 360 MLAHKAEED---GVACVEFLAG---KHGHVDYDKVPGVVYTHP-------------EVAS 400
E+D G AC+ LAG + G D G + V +
Sbjct: 306 -----EEQDFVTGQACLVPLAGPANRQGRXAADNXFGREERYQGTQGTAICKVFDLAVGA 360
Query: 401 VGKTEEQVKELGVEY 415
GK E+Q+K+ G+ +
Sbjct: 361 TGKNEKQLKQAGIAF 375
>pdb|3NTA|A Chain A, Structure Of The Shewanella Loihica Pv-4 Nadh-Dependent
Persulfide Reductase
pdb|3NTA|B Chain B, Structure Of The Shewanella Loihica Pv-4 Nadh-Dependent
Persulfide Reductase
Length = 574
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 65/255 (25%), Positives = 105/255 (41%), Gaps = 53/255 (20%)
Query: 197 DEKRIVSSTGALALNEVPKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIVPSMDGE 256
D RI+ + + N V + V+G G+IGLE LG + T++E A + +D E
Sbjct: 138 DXDRILQT---IQXNNV-EHATVVGGGFIGLEXXESLHHLGIKTTLLELADQVXTPVDRE 193
Query: 257 IRKQFQRSLEKQKMKFMLKTKVVGVDLSGDGVKLTLEPAAGGEKT--------------- 301
+++ Q + L T + V V+ + A GE T
Sbjct: 194 XAGFAHQAIRDQGVDLRLGTALSEVSYQ---VQTHVASDAAGEDTAHQHIKGHLSLTLSN 250
Query: 302 --ILEADVVLVSAGRTPFTAGLGLDKIGVETDKMGRIPVNERFATNIPGVYAIGDVIPGP 359
+LE D+++ + G P T L D G+ ++G I VN T+ P +YA+GD +
Sbjct: 251 GELLETDLLIXAIGVRPETQ-LARDA-GLAIGELGGIKVNAXXQTSDPAIYAVGDAV--- 305
Query: 360 MLAHKAEED---GVACVEFLAG---KHGHVDYDKVPGVVYTHP-------------EVAS 400
E+D G AC+ LAG + G D G + V +
Sbjct: 306 -----EEQDFVTGQACLVPLAGPANRQGRXAADNXFGREERYQGTQGTAICKVFDLAVGA 360
Query: 401 VGKTEEQVKELGVEY 415
GK E+Q+K+ G+ +
Sbjct: 361 TGKNEKQLKQAGIAF 375
>pdb|3LB8|A Chain A, Crystal Structure Of The Covalent Putidaredoxin Reductase-
Putidaredoxin Complex
pdb|3LB8|B Chain B, Crystal Structure Of The Covalent Putidaredoxin Reductase-
Putidaredoxin Complex
Length = 436
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 68/146 (46%), Gaps = 17/146 (11%)
Query: 215 KKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIVPSMDGEIRKQFQRSLEKQK-MKFM 273
+LVVIG GYIGLE+ + + VT+++ AA ++ + F L ++ +
Sbjct: 149 NRLVVIGGGYIGLEVAATAIKANMHVTLLDTAARVLERVTAPPVSAFYEHLHREAGVDIR 208
Query: 274 LKTKVVGVDLSGDGVKLTLEPAAGGEKTILEADVVLVSAGRTPFT-----AGLGLDKIGV 328
T+V G ++S D K+T G T L AD+V+ G P AGL +D
Sbjct: 209 TGTQVCGFEMSTDQQKVTAVLCEDG--TRLPADLVIAGIGLIPNCELASAAGLQVDN--- 263
Query: 329 ETDKMGRIPVNERFATNIPGVYAIGD 354
I +NE T+ P + A+GD
Sbjct: 264 ------GIVINEHMQTSDPLIMAVGD 283
>pdb|1Q1R|A Chain A, Crystal Structure Of Putidaredoxin Reductase From
Pseudomonas Putida
pdb|1Q1R|B Chain B, Crystal Structure Of Putidaredoxin Reductase From
Pseudomonas Putida
pdb|1Q1W|A Chain A, Crystal Structure Of Putidaredoxin Reductase From
Pseudomonas Putida
pdb|1Q1W|B Chain B, Crystal Structure Of Putidaredoxin Reductase From
Pseudomonas Putida
Length = 431
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 68/146 (46%), Gaps = 17/146 (11%)
Query: 215 KKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIVPSMDGEIRKQFQRSLEKQK-MKFM 273
+LVVIG GYIGLE+ + + VT+++ AA ++ + F L ++ +
Sbjct: 150 NRLVVIGGGYIGLEVAATAIKANMHVTLLDTAARVLERVTAPPVSAFYEHLHREAGVDIR 209
Query: 274 LKTKVVGVDLSGDGVKLTLEPAAGGEKTILEADVVLVSAGRTPFT-----AGLGLDKIGV 328
T+V G ++S D K+T G T L AD+V+ G P AGL +D
Sbjct: 210 TGTQVCGFEMSTDQQKVTAVLCEDG--TRLPADLVIAGIGLIPNCELASAAGLQVDN--- 264
Query: 329 ETDKMGRIPVNERFATNIPGVYAIGD 354
I +NE T+ P + A+GD
Sbjct: 265 ------GIVINEHMQTSDPLIMAVGD 284
>pdb|1FL2|A Chain A, Catalytic Core Component Of The Alkylhydroperoxide
Reductase Ahpf From E.Coli
Length = 310
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 56/196 (28%), Positives = 90/196 (45%), Gaps = 24/196 (12%)
Query: 174 VVKGKNIIIATGSDVKSLPGITIDEKRIVSST------GALALNEVPKKLVVIGAGYIGL 227
V+K ++II+ATG+ +++ D+ R T G L K++ VIG G G+
Sbjct: 101 VLKARSIIVATGAKWRNMNVPGEDQYRTKGVTYCPHCDGPLFKG---KRVAVIGGGNSGV 157
Query: 228 EMGSVWARLGSEVTVVEFAADIVPSMDG-EIRKQFQRSLEKQKMKFMLKTKVVGVDLSGD 286
E A + VT++EFA P M ++ + RSL+ + +T ++ GD
Sbjct: 158 EAAIDLAGIVEHVTLLEFA----PEMKADQVLQDKLRSLKNVDIILNAQT----TEVKGD 209
Query: 287 GVK---LTLEPAAGGEKTILEADVVLVSAGRTPFTAGLGLDKIGVETDKMGRIPVNERFA 343
G K L G+ +E + V G P T L + VE ++MG I ++ +
Sbjct: 210 GSKVVGLEYRDRVSGDIHNIELAGIFVQIGLLPNTNWL---EGAVERNRMGEIIIDAKCE 266
Query: 344 TNIPGVYAIGDVIPGP 359
TN+ GV+A GD P
Sbjct: 267 TNVKGVFAAGDCTTVP 282
>pdb|3EF6|A Chain A, Crystal Structure Of Toluene 2,3-Dioxygenase Reductase
pdb|4EMI|A Chain A, Toluene Dioxygenase Reductase In Reduced State In Complex
With Nad+
pdb|4EMJ|A Chain A, Complex Between The Reductase And Ferredoxin Components Of
Toluene Dioxygenase
Length = 410
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 93/207 (44%), Gaps = 36/207 (17%)
Query: 173 TVVKGKNIIIATGSDVKS-------LPGI----TIDEKRIVSSTGALALNEVPKKLVVIG 221
T + I+IATGS ++ LPG+ T + +++ + A +L+++G
Sbjct: 96 TTLSADAIVIATGSRARTMALPGSQLPGVVTLRTYGDVQVLRDSWTSA-----TRLLIVG 150
Query: 222 AGYIGLEMGSVWARLGSEVTVVEFAADIVPSMDGEIRKQFQRSLEKQ-KMKFMLKTKVVG 280
G IG E+ + +LG VT++E +++ + G + R L + ++ L T VVG
Sbjct: 151 GGLIGCEVATTARKLGLSVTILEAGDELLVRVLGRRIGAWLRGLLTELGVQVELGTGVVG 210
Query: 281 VDLSGDGVKLTLEPAAGGEKTILEADVVLVSAGRTPF-----TAGLGLDKIGVETDKMGR 335
SG+G LE + AD L+ G P AGL D+ GV D G
Sbjct: 211 --FSGEG---QLEQVMASDGRSFVADSALICVGAEPADQLARQAGLACDR-GVIVDHCG- 263
Query: 336 IPVNERFATNIPGVYAIGDVIPGPMLA 362
AT GV+A+GDV P+ A
Sbjct: 264 -------ATLAKGVFAVGDVASWPLRA 283
>pdb|1NHR|A Chain A, An L40c Mutation Converts The Cysteine-Sulfenic Acid Redox
Centre In Enterococcal Nadh Peroxidase To A Disulfide
Length = 447
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 76/289 (26%), Positives = 117/289 (40%), Gaps = 53/289 (18%)
Query: 215 KKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIVPS-----MDGEIRKQFQRSLEKQK 269
+VVIG+GYIG+E +A+ G +VTV+ DI+ +D E +E
Sbjct: 150 NNVVVIGSGYIGIEAAEAFAKAGKKVTVI----DILDRPLGVYLDKEFTDVLTEEMEANN 205
Query: 270 MKFMLKTKVVGVDLSGDGVKLTLEPAAGGEKTILEADVVLVSAGRTPFTAGLGLDKIGVE 329
+ V + G K+ +K +AD+V+V+ G P TA L K +E
Sbjct: 206 ITIATGETVERYEGDGRVQKVVT------DKNAYDADLVVVAVGVRPNTAWL---KGTLE 256
Query: 330 TDKMGRIPVNERFATNIPGVYAIGDVI-----PGPM-----LAHKAEEDGVACVEFLAGK 379
G I +E T+ P V+A+GD P LA A + G V K
Sbjct: 257 LHPNGLIKTDEYMRTSEPDVFAVGDATLIKYNPADTEVNIALATNARKQGRFAV-----K 311
Query: 380 HGHVDYDKVPGV-------VYTHPEVASVGKTEEQVKELGVEYRVGKF--PFLANSRAKA 430
+ PGV V+ + + AS G E ++LG E + +L +
Sbjct: 312 NLEEPVKPFPGVQGSSGLAVFDY-KFASTGINEVMAQKLGKETKAVTVVEDYLMDFNP-- 368
Query: 431 IDDAEGIVKILAEKETDKILGVHIMAP-------NAGELIHEAAMATHD 472
D + K++ + ET +ILG +M+ NA L +A M D
Sbjct: 369 -DKQKAWFKLVYDPETTQILGAQLMSKADLTANINAISLAIQAKMTIED 416
>pdb|1NHS|A Chain A, An L40c Mutation Converts The Cysteine-Sulfenic Acid Redox
Centre In Enterococcal Nadh Peroxidase To A Disulfide
Length = 447
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 76/289 (26%), Positives = 117/289 (40%), Gaps = 53/289 (18%)
Query: 215 KKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIVPS-----MDGEIRKQFQRSLEKQK 269
+VVIG+GYIG+E +A+ G +VTV+ DI+ +D E +E
Sbjct: 150 NNVVVIGSGYIGIEAAEAFAKAGKKVTVI----DILDRPLGVYLDKEFTDVLTEEMEANN 205
Query: 270 MKFMLKTKVVGVDLSGDGVKLTLEPAAGGEKTILEADVVLVSAGRTPFTAGLGLDKIGVE 329
+ V + G K+ +K +AD+V+V+ G P TA L K +E
Sbjct: 206 ITIATGETVERYEGDGRVQKVVT------DKNAYDADLVVVAVGVRPNTAWL---KGTLE 256
Query: 330 TDKMGRIPVNERFATNIPGVYAIGDVI-----PGPM-----LAHKAEEDGVACVEFLAGK 379
G I +E T+ P V+A+GD P LA A + G V K
Sbjct: 257 LHPNGLIKTDEYMRTSEPDVFAVGDATLIKYNPADTEVNIALATNARKQGRFAV-----K 311
Query: 380 HGHVDYDKVPGV-------VYTHPEVASVGKTEEQVKELGVEYRVGKF--PFLANSRAKA 430
+ PGV V+ + + AS G E ++LG E + +L +
Sbjct: 312 NLEEPVKPFPGVQGSSGLAVFDY-KFASTGINEVMAQKLGKETKAVTVVEDYLMDFNP-- 368
Query: 431 IDDAEGIVKILAEKETDKILGVHIMAP-------NAGELIHEAAMATHD 472
D + K++ + ET +ILG +M+ NA L +A M D
Sbjct: 369 -DKQKAWFKLVYDPETTQILGAQLMSKADLTANINAISLAIQAKMTIED 416
>pdb|1JOA|A Chain A, Nadh Peroxidase With Cysteine-Sulfenic Acid
pdb|1NPX|A Chain A, Structure Of Nadh Peroxidase From Streptococcus Faecalis
10c1 Refined At 2.16 Angstroms Resolution
pdb|2NPX|A Chain A, Nadh Binding Site And Catalysis Of Nadh Peroxidase
Length = 447
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 76/289 (26%), Positives = 117/289 (40%), Gaps = 53/289 (18%)
Query: 215 KKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIVPS-----MDGEIRKQFQRSLEKQK 269
+VVIG+GYIG+E +A+ G +VTV+ DI+ +D E +E
Sbjct: 150 NNVVVIGSGYIGIEAAEAFAKAGKKVTVI----DILDRPLGVYLDKEFTDVLTEEMEANN 205
Query: 270 MKFMLKTKVVGVDLSGDGVKLTLEPAAGGEKTILEADVVLVSAGRTPFTAGLGLDKIGVE 329
+ V + G K+ +K +AD+V+V+ G P TA L K +E
Sbjct: 206 ITIATGETVERYEGDGRVQKVVT------DKNAYDADLVVVAVGVRPNTAWL---KGTLE 256
Query: 330 TDKMGRIPVNERFATNIPGVYAIGDVI-----PGPM-----LAHKAEEDGVACVEFLAGK 379
G I +E T+ P V+A+GD P LA A + G V K
Sbjct: 257 LHPNGLIKTDEYMRTSEPDVFAVGDATLIKYNPADTEVNIALATNARKQGRFAV-----K 311
Query: 380 HGHVDYDKVPGV-------VYTHPEVASVGKTEEQVKELGVEYRVGKF--PFLANSRAKA 430
+ PGV V+ + + AS G E ++LG E + +L +
Sbjct: 312 NLEEPVKPFPGVQGSSGLAVFDY-KFASTGINEVMAQKLGKETKAVTVVEDYLMDFNP-- 368
Query: 431 IDDAEGIVKILAEKETDKILGVHIMAP-------NAGELIHEAAMATHD 472
D + K++ + ET +ILG +M+ NA L +A M D
Sbjct: 369 -DKQKAWFKLVYDPETTQILGAQLMSKADLTANINAISLAIQAKMTIED 416
>pdb|1NHQ|A Chain A, Crystallographic Analyses Of Nadh Peroxidase Cys42ala And
Cys42ser Mutants: Active Site Structure, Mechanistic
Implications, And An Unusual Environment Of Arg303
Length = 447
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 76/289 (26%), Positives = 117/289 (40%), Gaps = 53/289 (18%)
Query: 215 KKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIVPS-----MDGEIRKQFQRSLEKQK 269
+VVIG+GYIG+E +A+ G +VTV+ DI+ +D E +E
Sbjct: 150 NNVVVIGSGYIGIEAAEAFAKAGKKVTVI----DILDRPLGVYLDKEFTDVLTEEMEANN 205
Query: 270 MKFMLKTKVVGVDLSGDGVKLTLEPAAGGEKTILEADVVLVSAGRTPFTAGLGLDKIGVE 329
+ V + G K+ +K +AD+V+V+ G P TA L K +E
Sbjct: 206 ITIATGETVERYEGDGRVQKVVT------DKNAYDADLVVVAVGVRPNTAWL---KGTLE 256
Query: 330 TDKMGRIPVNERFATNIPGVYAIGDVI-----PGPM-----LAHKAEEDGVACVEFLAGK 379
G I +E T+ P V+A+GD P LA A + G V K
Sbjct: 257 LHPNGLIKTDEYMRTSEPDVFAVGDATLIKYNPADTEVNIALATNARKQGRFAV-----K 311
Query: 380 HGHVDYDKVPGV-------VYTHPEVASVGKTEEQVKELGVEYRVGKF--PFLANSRAKA 430
+ PGV V+ + + AS G E ++LG E + +L +
Sbjct: 312 NLEEPVKPFPGVQGSSGLAVFDY-KFASTGINEVMAQKLGKETKAVTVVEDYLMDFNP-- 368
Query: 431 IDDAEGIVKILAEKETDKILGVHIMAP-------NAGELIHEAAMATHD 472
D + K++ + ET +ILG +M+ NA L +A M D
Sbjct: 369 -DKQKAWFKLVYDPETTQILGAQLMSKADLTANINAISLAIQAKMTIED 416
>pdb|1NHP|A Chain A, Crystallographic Analyses Of Nadh Peroxidase Cys42ala And
Cys42ser Mutants: Active Site Structure, Mechanistic
Implications, And An Unusual Environment Of Arg303
Length = 447
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 76/289 (26%), Positives = 117/289 (40%), Gaps = 53/289 (18%)
Query: 215 KKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIVPS-----MDGEIRKQFQRSLEKQK 269
+VVIG+GYIG+E +A+ G +VTV+ DI+ +D E +E
Sbjct: 150 NNVVVIGSGYIGIEAAEAFAKAGKKVTVI----DILDRPLGVYLDKEFTDVLTEEMEANN 205
Query: 270 MKFMLKTKVVGVDLSGDGVKLTLEPAAGGEKTILEADVVLVSAGRTPFTAGLGLDKIGVE 329
+ V + G K+ +K +AD+V+V+ G P TA L K +E
Sbjct: 206 ITIATGETVERYEGDGRVQKVVT------DKNAYDADLVVVAVGVRPNTAWL---KGTLE 256
Query: 330 TDKMGRIPVNERFATNIPGVYAIGDVI-----PGPM-----LAHKAEEDGVACVEFLAGK 379
G I +E T+ P V+A+GD P LA A + G V K
Sbjct: 257 LHPNGLIKTDEYMRTSEPDVFAVGDATLIKYNPADTEVNIALATNARKQGRFAV-----K 311
Query: 380 HGHVDYDKVPGV-------VYTHPEVASVGKTEEQVKELGVEYRVGKF--PFLANSRAKA 430
+ PGV V+ + + AS G E ++LG E + +L +
Sbjct: 312 NLEEPVKPFPGVQGSSGLAVFDY-KFASTGINEVMAQKLGKETKAVTVVEDYLMDFNP-- 368
Query: 431 IDDAEGIVKILAEKETDKILGVHIMAP-------NAGELIHEAAMATHD 472
D + K++ + ET +ILG +M+ NA L +A M D
Sbjct: 369 -DKQKAWFKLVYDPETTQILGAQLMSKADLTANINAISLAIQAKMTIED 416
>pdb|1F8W|A Chain A, Crystal Structure Of Nadh Peroxidase Mutant: R303m
Length = 447
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 76/289 (26%), Positives = 117/289 (40%), Gaps = 53/289 (18%)
Query: 215 KKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIVPS-----MDGEIRKQFQRSLEKQK 269
+VVIG+GYIG+E +A+ G +VTV+ DI+ +D E +E
Sbjct: 150 NNVVVIGSGYIGIEAAEAFAKAGKKVTVI----DILDRPLGVYLDKEFTDVLTEEMEANN 205
Query: 270 MKFMLKTKVVGVDLSGDGVKLTLEPAAGGEKTILEADVVLVSAGRTPFTAGLGLDKIGVE 329
+ V + G K+ +K +AD+V+V+ G P TA L K +E
Sbjct: 206 ITIATGETVERYEGDGRVQKVVT------DKNAYDADLVVVAVGVRPNTAWL---KGTLE 256
Query: 330 TDKMGRIPVNERFATNIPGVYAIGDVI-----PGPM-----LAHKAEEDGVACVEFLAGK 379
G I +E T+ P V+A+GD P LA A + G V K
Sbjct: 257 LHPNGLIKTDEYMRTSEPDVFAVGDATLIKYNPADTEVNIALATNAMKQGRFAV-----K 311
Query: 380 HGHVDYDKVPGV-------VYTHPEVASVGKTEEQVKELGVEYRVGKF--PFLANSRAKA 430
+ PGV V+ + + AS G E ++LG E + +L +
Sbjct: 312 NLEEPVKPFPGVQGSSGLAVFDY-KFASTGINEVMAQKLGKETKAVTVVEDYLMDFNP-- 368
Query: 431 IDDAEGIVKILAEKETDKILGVHIMAP-------NAGELIHEAAMATHD 472
D + K++ + ET +ILG +M+ NA L +A M D
Sbjct: 369 -DKQKAWFKLVYDPETTQILGAQLMSKADLTANINAISLAIQAKMTIED 416
>pdb|2A87|A Chain A, Crystal Structure Of M. Tuberculosis Thioredoxin Reductase
pdb|2A87|B Chain B, Crystal Structure Of M. Tuberculosis Thioredoxin Reductase
Length = 335
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 80/189 (42%), Gaps = 20/189 (10%)
Query: 176 KGKNIIIATGSDVKSL--PGITIDEKRIVSSTGAL-ALNEVPKKLVVIGAGYIGLEMGSV 232
+ + +I+A G+ + L PG R VSS + + VIG G +E +
Sbjct: 114 RARAVILAMGAAARYLQVPGEQELLGRGVSSCATCDGFFFRDQDIAVIGGGDSAMEEATF 173
Query: 233 WARLGSEVTVV----EFAADIVPSMDGEIRKQFQRSLEKQKMKFMLKTKVVGVDLSGDGV 288
R VT+V EF A + R+ K++F+ VV VD
Sbjct: 174 LTRFARSVTLVHRRDEFRASKI---------MLDRARNNDKIRFLTNHTVVAVDGDTTVT 224
Query: 289 KLTLEPAAGGEKTILEADVVLVSAGRTPFTAGLGLDKIGVETDKMGRIPVNERF-ATNIP 347
L + G +T L V V+ G P + GL + ++ D G + V R +T++P
Sbjct: 225 GLRVRDTNTGAETTLPVTGVFVAIGHEPRS---GLVREAIDVDPDGYVLVQGRTTSTSLP 281
Query: 348 GVYAIGDVI 356
GV+A GD++
Sbjct: 282 GVFAAGDLV 290
>pdb|1HYU|A Chain A, Crystal Structure Of Intact Ahpf
Length = 521
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 89/196 (45%), Gaps = 24/196 (12%)
Query: 174 VVKGKNIIIATGSDVKSLPGITIDEKRIVSST------GALALNEVPKKLVVIGAGYIGL 227
V+K ++IIIATG+ +++ D+ R T G L K++ VIG G G+
Sbjct: 312 VLKARSIIIATGAKWRNMNVPGEDQYRTKGVTYCPHCDGPLFKG---KRVAVIGGGNSGV 368
Query: 228 EMGSVWARLGSEVTVVEFAADIVPSMDG-EIRKQFQRSLEKQKMKFMLKTKVVGVDLSGD 286
E A + VT++EFA P M ++ + RSL+ + +T ++ GD
Sbjct: 369 EAAIDLAGIVEHVTLLEFA----PEMKADQVLQDKVRSLKNVDIILNAQT----TEVKGD 420
Query: 287 GVK---LTLEPAAGGEKTILEADVVLVSAGRTPFTAGLGLDKIGVETDKMGRIPVNERFA 343
G K L G+ + + V G P T L + +E ++MG I ++ +
Sbjct: 421 GSKVVGLEYRDRVSGDIHSVALAGIFVQIGLLPNTHWL---EGALERNRMGEIIIDAKCE 477
Query: 344 TNIPGVYAIGDVIPGP 359
T++ GV+A GD P
Sbjct: 478 TSVKGVFAAGDCTTVP 493
>pdb|2V3A|A Chain A, Crystal Structure Of Rubredoxin Reductase From Pseudomonas
Aeruginosa.
pdb|2V3B|A Chain A, Crystal Structure Of The Electron Transfer Complex
Rubredoxin - Rubredoxin Reductase From Pseudomonas
Aeruginosa
Length = 384
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 87/199 (43%), Gaps = 42/199 (21%)
Query: 215 KKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIVPS-MDGEIRKQFQRSLEKQKMKFM 273
++++++GAG IG E + + G ++ VV ++P + K Q LE ++F
Sbjct: 146 RRVLLLGAGLIGCEFANDLSSGGYQLDVVAPCEQVMPGLLHPAAAKAVQAGLEGLGVRFH 205
Query: 274 LKTKVVGVDLSGDGVKLTLEPAAGGEKTILEADVVLVSAGRTP-----FTAGLGLDKIGV 328
L + + +G+G++ L + ++ D+V+ + G P F AGL +++ G+
Sbjct: 206 LGPVLASLKKAGEGLEAHLS-----DGEVIPCDLVVSAVGLRPRTELAFAAGLAVNR-GI 259
Query: 329 ETDKMGRIPVNERFATNIPGVYAIGDVIPGPMLAHKAEEDGV---------AC----VEF 375
D+ R T+ +YA+GD AE DG+ AC +
Sbjct: 260 VVDRSLR--------TSHANIYALGDC---------AEVDGLNLLYVMPLMACARALAQT 302
Query: 376 LAGKHGHVDYDKVPGVVYT 394
LAG V Y +P V T
Sbjct: 303 LAGNPSQVAYGPMPVTVKT 321
>pdb|3FG2|P Chain P, Crystal Structure Of Ferredoxin Reductase For The Cyp199a2
System From Rhodopseudomonas Palustris
Length = 404
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 95/221 (42%), Gaps = 40/221 (18%)
Query: 156 KFISPSEVSVDT-----IEGGNTVVKGKNIIIATGS-----DVK--SLPGI----TIDEK 199
+ IS VS+D + T ++ ++++ATG+ DV SLP + T+DE
Sbjct: 73 ELISDRMVSIDREGRKLLLASGTAIEYGHLVLATGARNRMLDVPNASLPDVLYLRTLDES 132
Query: 200 RIVSSTGALALNEVPKK--LVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIVPS-MDGE 256
++ +P K +VVIGAG+IGLE + G EV VVE A ++ + E
Sbjct: 133 EVLR-------QRMPDKKHVVVIGAGFIGLEFAATARAKGLEVDVVELAPRVMARVVTPE 185
Query: 257 IRKQFQRSLEKQKMKFMLKTKVVGVDLSGD---GVKLTLEPAAGGEKTILEADVVLVSAG 313
I F ++ + + GD GV L+ + L D+V+V G
Sbjct: 186 ISSYFHDRHSGAGIRMHYGVRATEIAAEGDRVTGVVLS-------DGNTLPCDLVVVGVG 238
Query: 314 RTPFTAGLGLDKIGVETDKMGRIPVNERFATNIPGVYAIGD 354
P + + G I V+++ T+ P + AIGD
Sbjct: 239 VIP---NVEIAAAAGLPTAAG-IIVDQQLLTSDPHISAIGD 275
>pdb|2GR3|A Chain A, Crystal Structure Of Ferredoxin Reductase, Bpha4 (Oxidized
Form)
Length = 408
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 84/200 (42%), Gaps = 31/200 (15%)
Query: 168 IEGGNTVVKGKNIIIATGSDVKSLPGIT-----IDEKRIVSSTGALALNEVPK-KLVVIG 221
+ G T+ G +++ATG+ ++LP + + R + + P+ +L+++G
Sbjct: 94 LSDGRTLPYG-TLVLATGAAPRALPTLQGATMPVHTLRTLEDARRIQAGLRPQSRLLIVG 152
Query: 222 AGYIGLEMGSVWARLGSEVTVVEFAADIVPSMDGEIRKQF-QRSLEKQKMKFMLKTKVVG 280
G IGLE+ + G V++VE ++ F R Q + + V G
Sbjct: 153 GGVIGLELAATARTAGVHVSLVETQPRLMSRAAPATLADFVARYHAAQGVDLRFERSVTG 212
Query: 281 VDLSGDGVKLTLEPAAGGEKTILEADVVLVSAG-----RTPFTAGLGLDKIGVETDKMGR 335
S DGV L + T + AD+V+V G AGL D G+ D GR
Sbjct: 213 ---SVDGVVLL------DDGTRIAADMVVVGIGVLANDALARAAGLACDD-GIFVDAYGR 262
Query: 336 IPVNERFATNIPGVYAIGDV 355
T P VYA+GDV
Sbjct: 263 --------TTCPDVYALGDV 274
>pdb|1D7Y|A Chain A, Crystal Structure Of Nadh-Dependent Ferredoxin Reductase,
Bpha4
pdb|1F3P|A Chain A, Ferredoxin Reductase (Bpha4)-Nadh Complex
pdb|2GQW|A Chain A, Crystal Structure Of Ferredoxin Reductase, Bpha4 (Oxidized
Form)
pdb|2GR0|A Chain A, Crystal Structure Of Ferredoxin Reductase, Bpha4 (oxidized
Form, Nad+ Complex)
pdb|2GR1|A Chain A, Crystal Structure Of Ferredoxin Reductase, Bpha4
(Hydroquinone)
pdb|2GR2|A Chain A, Crystal Structure Of Ferredoxin Reductase, Bpha4 (Oxidized
Form)
pdb|2YVF|A Chain A, Crystal Structure Of Ferredoxin Reductase Bpha4
(Hydroquinone)
pdb|2YVG|A Chain A, Crystal Structure Of Ferredoxin Reductase, Bpha4
(Blue-Semiquinone)
pdb|2YVJ|A Chain A, Crystal Structure Of The Ferredoxin-Ferredoxin Reductase
(Bpha3-Bpha4)complex
pdb|2YVJ|P Chain P, Crystal Structure Of The Ferredoxin-Ferredoxin Reductase
(Bpha3-Bpha4)complex
Length = 408
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 84/200 (42%), Gaps = 31/200 (15%)
Query: 168 IEGGNTVVKGKNIIIATGSDVKSLPGIT-----IDEKRIVSSTGALALNEVPK-KLVVIG 221
+ G T+ G +++ATG+ ++LP + + R + + P+ +L+++G
Sbjct: 94 LSDGRTLPYG-TLVLATGAAPRALPTLQGATMPVHTLRTLEDARRIQAGLRPQSRLLIVG 152
Query: 222 AGYIGLEMGSVWARLGSEVTVVEFAADIVPSMDGEIRKQF-QRSLEKQKMKFMLKTKVVG 280
G IGLE+ + G V++VE ++ F R Q + + V G
Sbjct: 153 GGVIGLELAATARTAGVHVSLVETQPRLMSRAAPATLADFVARYHAAQGVDLRFERSVTG 212
Query: 281 VDLSGDGVKLTLEPAAGGEKTILEADVVLVSAG-----RTPFTAGLGLDKIGVETDKMGR 335
S DGV L + T + AD+V+V G AGL D G+ D GR
Sbjct: 213 ---SVDGVVLL------DDGTRIAADMVVVGIGVLANDALARAAGLACDD-GIFVDAYGR 262
Query: 336 IPVNERFATNIPGVYAIGDV 355
T P VYA+GDV
Sbjct: 263 --------TTCPDVYALGDV 274
>pdb|3F8P|A Chain A, Structure Of Sulfolobus Solfataricus Trxr-B3
pdb|3F8P|B Chain B, Structure Of Sulfolobus Solfataricus Trxr-B3
pdb|3F8P|C Chain C, Structure Of Sulfolobus Solfataricus Trxr-B3
pdb|3F8P|D Chain D, Structure Of Sulfolobus Solfataricus Trxr-B3
pdb|3F8R|A Chain A, Crystal Structure Of Sulfolobus Solfataricus Thioredoxin
Reductase B3 In Complex With Two Nadp Molecules
pdb|3F8R|B Chain B, Crystal Structure Of Sulfolobus Solfataricus Thioredoxin
Reductase B3 In Complex With Two Nadp Molecules
pdb|3F8R|C Chain C, Crystal Structure Of Sulfolobus Solfataricus Thioredoxin
Reductase B3 In Complex With Two Nadp Molecules
pdb|3F8R|D Chain D, Crystal Structure Of Sulfolobus Solfataricus Thioredoxin
Reductase B3 In Complex With Two Nadp Molecules
Length = 323
Score = 37.7 bits (86), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 48/91 (52%), Gaps = 6/91 (6%)
Query: 266 EKQKMKFMLKTKVVGVDLSGDGV--KLTLEPAAGGEKTILEADVVLVSAGRTPFTAGLGL 323
+K ++F+L + V ++ GD V ++ +E GE L + V + G P T
Sbjct: 201 KKPNVEFVLNSVVK--EIKGDKVVKQVVVENLKTGEIKELNVNGVFIEIGFDPPTDFAKS 258
Query: 324 DKIGVETDKMGRIPVNERFATNIPGVYAIGD 354
+ G+ETD G I V+E T++PGV+A GD
Sbjct: 259 N--GIETDTNGYIKVDEWMRTSVPGVFAAGD 287
>pdb|3F8D|A Chain A, Structure Of Sulfolobus Solfataricus Thioredoxin Reductase
Mutant C147a
pdb|3F8D|B Chain B, Structure Of Sulfolobus Solfataricus Thioredoxin Reductase
Mutant C147a
pdb|3F8D|C Chain C, Structure Of Sulfolobus Solfataricus Thioredoxin Reductase
Mutant C147a
pdb|3F8D|D Chain D, Structure Of Sulfolobus Solfataricus Thioredoxin Reductase
Mutant C147a
Length = 323
Score = 37.7 bits (86), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 48/91 (52%), Gaps = 6/91 (6%)
Query: 266 EKQKMKFMLKTKVVGVDLSGDGV--KLTLEPAAGGEKTILEADVVLVSAGRTPFTAGLGL 323
+K ++F+L + V ++ GD V ++ +E GE L + V + G P T
Sbjct: 201 KKPNVEFVLNSVVK--EIKGDKVVKQVVVENLKTGEIKELNVNGVFIEIGFDPPTDFAKS 258
Query: 324 DKIGVETDKMGRIPVNERFATNIPGVYAIGD 354
+ G+ETD G I V+E T++PGV+A GD
Sbjct: 259 N--GIETDTNGYIKVDEWMRTSVPGVFAAGD 287
>pdb|2ZBW|A Chain A, Crystal Structure Of Thioredoxin Reductase-Like Protein
From Thermus Thermophilus Hb8
pdb|2ZBW|B Chain B, Crystal Structure Of Thioredoxin Reductase-Like Protein
From Thermus Thermophilus Hb8
Length = 335
Score = 37.4 bits (85), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 36/62 (58%), Gaps = 5/62 (8%)
Query: 299 EKTILEADVVLVSAGRTPFTAGLG-LDKIGVETDKMGRIPVNERFATNIPGVYAIGDVIP 357
E+ LE D VL+ AG + LG L G+ +K +I V+ AT+IPGVYA GD++
Sbjct: 235 EELALEVDAVLILAG---YITKLGPLANWGLALEK-NKIKVDTTXATSIPGVYACGDIVT 290
Query: 358 GP 359
P
Sbjct: 291 YP 292
>pdb|3ITJ|A Chain A, Crystal Structure Of Saccharomyces Cerevisiae Thioredoxin
Reductase 1 (trr1)
pdb|3ITJ|B Chain B, Crystal Structure Of Saccharomyces Cerevisiae Thioredoxin
Reductase 1 (trr1)
pdb|3ITJ|C Chain C, Crystal Structure Of Saccharomyces Cerevisiae Thioredoxin
Reductase 1 (trr1)
pdb|3ITJ|D Chain D, Crystal Structure Of Saccharomyces Cerevisiae Thioredoxin
Reductase 1 (trr1)
Length = 338
Score = 37.0 bits (84), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 85/186 (45%), Gaps = 21/186 (11%)
Query: 180 IIIATGSDVKS--LPGITIDEKRIVSSTGALALNEVP----KKLVVIGAGYIGLEMGSVW 233
II+ATG+ K LPG ++ +S+ A+ VP K L VIG G E
Sbjct: 134 IILATGASAKRMHLPGEETYWQKGISAC-AVCDGAVPIFRNKPLAVIGGGDSACEEAQFL 192
Query: 234 ARLGSEVTVVEFAADIVPSMDGEIRKQFQRSLEKQKMKFMLKTKVVGVDLSGDGV---KL 290
+ GS+V ++ + S + +R+ + +K++ + T V ++ GDG L
Sbjct: 193 TKYGSKVFMLVRKDHLRASTIMQ-----KRAEKNEKIEILYNT--VALEAKGDGKLLNAL 245
Query: 291 TLEPAAGGEKTILEADVVLVSAGRTPFTAGLGLDKIGVETDKMGRI-PVNERFATNIPGV 349
++ E+T L + + G TP T + V+TD+ G I V T++PG
Sbjct: 246 RIKNTKKNEETDLPVSGLFYAIGHTPATKIVAGQ---VDTDEAGYIKTVPGSSLTSVPGF 302
Query: 350 YAIGDV 355
+A GDV
Sbjct: 303 FAAGDV 308
>pdb|3D8X|A Chain A, Crystal Structure Of Saccharomyces Cerevisiae Nadph
Dependent Thioredoxin Reductase 1
pdb|3D8X|B Chain B, Crystal Structure Of Saccharomyces Cerevisiae Nadph
Dependent Thioredoxin Reductase 1
Length = 326
Score = 36.6 bits (83), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 54/189 (28%), Positives = 86/189 (45%), Gaps = 27/189 (14%)
Query: 180 IIIATGSDVKS--LPGITIDEKRIVSSTGALALNEVP----KKLVVIGAGYIGLEMGSVW 233
II+ATG+ K LPG ++ +S+ A+ VP K L VIG G E
Sbjct: 122 IILATGASAKRMHLPGEETYWQKGISAC-AVCDGAVPIFRNKPLAVIGGGDSACEEAQFL 180
Query: 234 ARLGSEVTVVEFAADIVPSMDGEIRKQFQRSLEKQKMKFMLKTKVVGVDLSGDGV---KL 290
+ GS+V ++ + S + +R+ + +K++ + T V ++ GDG L
Sbjct: 181 TKYGSKVFMLVRKDHLRASTIMQ-----KRAEKNEKIEILYNT--VALEAKGDGKLLNAL 233
Query: 291 TLEPAAGGEKTILEADVVLVSAGRTPFT---AGLGLDKIGVETDKMGRI-PVNERFATNI 346
++ E+T L + + G TP T AG V+TD+ G I V T++
Sbjct: 234 RIKNTKKNEETDLPVSGLFYAIGHTPATKIVAGQ------VDTDEAGYIKTVPGSSLTSV 287
Query: 347 PGVYAIGDV 355
PG +A GDV
Sbjct: 288 PGFFAAGDV 296
>pdb|3LZW|A Chain A, Crystal Structure Of Ferredoxin-Nadp+ Oxidoreductase From
Bacillus Subtilis (Form I)
pdb|3LZX|A Chain A, Crystal Structure Of Ferredoxin-Nadp+ Oxidoreductase From
Bacillus Subtilis (Form Ii)
pdb|3LZX|B Chain B, Crystal Structure Of Ferredoxin-Nadp+ Oxidoreductase From
Bacillus Subtilis (Form Ii)
Length = 332
Score = 35.8 bits (81), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 36/68 (52%), Gaps = 5/68 (7%)
Query: 289 KLTLEPAAGGEKTILEADVVLVSAGRTPFTAGLG-LDKIGVETDKMGRIPVNERFATNIP 347
+L LE G K ILE D ++V+ G F + LG + G++ +K I V TNI
Sbjct: 223 QLVLEEVKGDRKEILEIDDLIVNYG---FVSSLGPIKNWGLDIEK-NSIVVKSTMETNIE 278
Query: 348 GVYAIGDV 355
G +A GD+
Sbjct: 279 GFFAAGDI 286
>pdb|3KD9|A Chain A, Crystal Structure Of Pyridine Nucleotide Disulfide
Oxidoreductase From Pyrococcus Horikoshii
pdb|3KD9|B Chain B, Crystal Structure Of Pyridine Nucleotide Disulfide
Oxidoreductase From Pyrococcus Horikoshii
pdb|3KD9|C Chain C, Crystal Structure Of Pyridine Nucleotide Disulfide
Oxidoreductase From Pyrococcus Horikoshii
Length = 449
Score = 35.4 bits (80), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 94/377 (24%), Positives = 164/377 (43%), Gaps = 72/377 (19%)
Query: 139 IEGLFKKNKVTYV--------KGYGKFISPSEVSVDT------IEGGNTVVKGKNIIIAT 184
+EGL +K+ Y +G ++ + VDT GG + ++ A
Sbjct: 51 VEGLSTPDKLMYYPPEVFIKKRGIDLHLNAEVIEVDTGYVRVRENGGEKSYEWDYLVFAN 110
Query: 185 GS--DVKSLPGITIDEKRIVSS---TGALALNEVPKK-----LVVIGAGYIGLEMGSVWA 234
G+ V ++ G+ + K + ++ ALA+ E +K +V+IG GYIG+EM +A
Sbjct: 111 GASPQVPAIEGVNL--KGVFTADLPPDALAIREYMEKYKVENVVIIGGGYIGIEMAEAFA 168
Query: 235 RLGSEVTVVEFAADIVPSMDGEIRKQFQRSLEKQKMKFMLKTKVVGVDLSGDGVKLTLEP 294
G VT++ + GE + +RS +K+ + + V+L + + +E
Sbjct: 169 AQGKNVTMI---------VRGE--RVLRRSFDKEVTDILEEKLKKHVNLRLQEITMKIEG 217
Query: 295 AAGGEKTILE-----ADVVLVSAGRTPFTAGLGLDK-IGVETDKMGRIPVNERFATNIPG 348
EK + + A++V+++ G P + L K +GV + G I NE+ T++
Sbjct: 218 EERVEKVVTDAGEYKAELVILATGIKP---NIELAKQLGVRIGETGAIWTNEKMQTSVEN 274
Query: 349 VYAIGD------VIPGPM----LAHKAEEDGVACVEFLAGKHGHVDYDKVPGVV------ 392
VYA GD VI G LA + G +AGK H PGV+
Sbjct: 275 VYAAGDVAETRHVITGRRVWVPLAPAGNKMGYVAGSNIAGKELH-----FPGVLGTAVTK 329
Query: 393 YTHPEVASVGKTEEQVKELGVEYRVGKFPFL-ANSRAKAIDDAEGI-VKILAEKETDKIL 450
+ E+ G TE + + G + R F+ A++R I +K + + ET+++L
Sbjct: 330 FMDVEIGKTGLTEMEALKEGYDVRTA---FIKASTRPHYYPGGREIWLKGVVDNETNRLL 386
Query: 451 GVHIMAPNAGELIHEAA 467
GV ++ + I AA
Sbjct: 387 GVQVVGSDILPRIDTAA 403
>pdb|1VDC|A Chain A, Structure Of Nadph Dependent Thioredoxin Reductase
Length = 333
Score = 34.3 bits (77), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 64/147 (43%), Gaps = 16/147 (10%)
Query: 215 KKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIVPSMDGEIRKQFQRSLEKQKMKFML 274
K L VIG G +E + + GS+V ++ S + QR+L K+ +
Sbjct: 160 KPLAVIGGGDSAMEEANFLTKYGSKVYIIHRRDAFRAS-----KIMQQRALSNPKIDVIW 214
Query: 275 KTKVVGVDLSGDGVK-----LTLEPAAGGEKTILEADVVLVSAGRTPFTAGLGLDKIGVE 329
+ VV + GDG + L ++ G+ + L+ + + G P T L GVE
Sbjct: 215 NSSVV--EAYGDGERDVLGGLKVKNVVTGDVSDLKVSGLFFAIGHEPATKFL---DGGVE 269
Query: 330 TDKMGRIPVNE-RFATNIPGVYAIGDV 355
D G + T++PGV+A GDV
Sbjct: 270 LDSDGYVVTKPGTTQTSVPGVFAAGDV 296
>pdb|2VDC|G Chain G, The 9.5 A Resolution Structure Of Glutamate Synthase From
Cryo-Electron Microscopy And Its Oligomerization
Behavior In Solution: Functional Implications.
pdb|2VDC|H Chain H, The 9.5 A Resolution Structure Of Glutamate Synthase From
Cryo-Electron Microscopy And Its Oligomerization
Behavior In Solution: Functional Implications.
pdb|2VDC|I Chain I, The 9.5 A Resolution Structure Of Glutamate Synthase From
Cryo-Electron Microscopy And Its Oligomerization
Behavior In Solution: Functional Implications.
pdb|2VDC|J Chain J, The 9.5 A Resolution Structure Of Glutamate Synthase From
Cryo-Electron Microscopy And Its Oligomerization
Behavior In Solution: Functional Implications.
pdb|2VDC|K Chain K, The 9.5 A Resolution Structure Of Glutamate Synthase From
Cryo-Electron Microscopy And Its Oligomerization
Behavior In Solution: Functional Implications.
pdb|2VDC|L Chain L, The 9.5 A Resolution Structure Of Glutamate Synthase From
Cryo-Electron Microscopy And Its Oligomerization
Behavior In Solution: Functional Implications
Length = 456
Score = 33.9 bits (76), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 44/179 (24%), Positives = 77/179 (43%), Gaps = 23/179 (12%)
Query: 209 ALNEVPKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIVPSMDGEIRKQFQRSLEKQ 268
+LN K +VV+G G ++ R G+ + D +M G R+ E++
Sbjct: 259 SLNAAGKHVVVLGGGDTAMDCVRTAIRQGATSVKCLYRRD-RKNMPGSQREVAH--AEEE 315
Query: 269 KMKFMLKTKVVGVDLSGDGV---------KLTLEPAAG--------GEKTILEADVVLVS 311
++F+ + G +GD V L + A G G + ++AD+V+ +
Sbjct: 316 GVEFIWQAAPEG--FTGDTVVTGVRAVRIHLGVADATGRQTPQVIEGSEFTVQADLVIKA 373
Query: 312 AGRTPFTAGLGLDKIGVETDKMGRIPVNERFA-TNIPGVYAIGDVIPGPMLAHKAEEDG 369
G P D+ ++ + G + V+ R TN+ GV+A GD++ G L A DG
Sbjct: 374 LGFEPEDLPNAFDEPELKVTRWGTLLVDHRTKMTNMDGVFAAGDIVRGASLVVWAIRDG 432
>pdb|3AB1|A Chain A, Crystal Structure Of Ferredoxin Nadp+ Oxidoreductase
pdb|3AB1|B Chain B, Crystal Structure Of Ferredoxin Nadp+ Oxidoreductase
Length = 360
Score = 33.9 bits (76), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 48/216 (22%), Positives = 97/216 (44%), Gaps = 19/216 (8%)
Query: 156 KFISPSEVSVDTIEGGNTVVKGKNIIIATG---SDVKSLPGI-TIDEKRIVSSTGALALN 211
K+ + + +T V + + ++IA G + + LP + ID + S+ A+
Sbjct: 99 KYTKLDDGTFETRTNTGNVYRSRAVLIAAGLGAFEPRKLPQLGNID--HLTGSSVYYAVK 156
Query: 212 EVP----KKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIVPSMDGEIRKQFQRSLEK 267
V K++V++G G L+ + + VT+V + G+ + +R+
Sbjct: 157 SVEDFKGKRVVIVGGGDSALDWTVGLIKNAASVTLVHRGHEF--QGHGKTAHEVERARAN 214
Query: 268 QKMKFMLKTKVVGVDLSGDGVKLTLEPAAGGEKTILEADVVLVSAGRTPFTAGLG-LDKI 326
+ L+T+V ++ S + ++ G K +EAD +L+ G F + LG L +
Sbjct: 215 GTIDVYLETEVASIEESNGVLTRVHLRSSDGSKWTVEADRLLILIG---FKSNLGPLARW 271
Query: 327 GVETDKMGRIPVNERFATNIPGVYAIGDV--IPGPM 360
+E + + V+ T++ G+YA GD+ PG +
Sbjct: 272 DLELYENALV-VDSHMKTSVDGLYAAGDIAYYPGKL 306
>pdb|2E1M|A Chain A, Crystal Structure Of L-Glutamate Oxidase From Streptomyces
Sp. X-119-6
Length = 376
Score = 33.9 bits (76), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 15/37 (40%), Positives = 25/37 (67%)
Query: 214 PKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIV 250
PK+++++GAG GL G + R G +VT++E A+ V
Sbjct: 44 PKRILIVGAGIAGLVAGDLLTRAGHDVTILEANANRV 80
>pdb|2CDU|A Chain A, The Crystal Structure Of Water-Forming Nad(P)h Oxidase
From Lactobacillus Sanfranciscensis
pdb|2CDU|B Chain B, The Crystal Structure Of Water-Forming Nad(P)h Oxidase
From Lactobacillus Sanfranciscensis
Length = 452
Score = 33.5 bits (75), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 43/184 (23%), Positives = 78/184 (42%), Gaps = 19/184 (10%)
Query: 180 IIIATGSD--VKSLPGITIDEKRIV----SSTGALALNEVPK--KLVVIGAGYIGLEMGS 231
+I+ TGS V +PGI D R+ + E PK + +IG+GYIG E+
Sbjct: 109 LIMTTGSKPTVPPIPGI--DSSRVYLCKNYNDAKKLFEEAPKAKTITIIGSGYIGAELAE 166
Query: 232 VWARLGSEVTVVEFAADIV-PSMDGEIRKQFQRSLEKQKMKFMLKTKVVGVDLSGDGVKL 290
++ V +++ ++ D E + E + +L +KV + D ++
Sbjct: 167 AYSNQNYNVNLIDGHERVLYKYFDKEFTDILAKDYEAHGVNLVLGSKVAAFEEVDD--EI 224
Query: 291 TLEPAAGGEKTILEADVVLVSAGRTPFTAGLGLDKIGVETDKMGRIPVNERFATNIPGVY 350
+ G E +++D+ ++ G P T L K V G I +E ++ ++
Sbjct: 225 ITKTLDGKE---IKSDIAILCIGFRPNTELL---KGKVAMLDNGAIITDEYMHSSNRDIF 278
Query: 351 AIGD 354
A GD
Sbjct: 279 AAGD 282
>pdb|4E0V|A Chain A, Structure Of L-Amino Acid Oxidase From The B. Jararacussu
Venom
pdb|4E0V|B Chain B, Structure Of L-Amino Acid Oxidase From The B. Jararacussu
Venom
Length = 497
Score = 33.1 bits (74), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 16/37 (43%), Positives = 23/37 (62%)
Query: 208 LALNEVPKKLVVIGAGYIGLEMGSVWARLGSEVTVVE 244
L+ PK++V++GAG GL V A G +VTV+E
Sbjct: 40 LSTTSNPKRVVIVGAGMSGLSAAYVLANAGHQVTVLE 76
>pdb|3EMK|A Chain A, 2.5a Crystal Structure Of GlucoseRIBITOL DEHYDROGENASE
From Brucella Melitensis
pdb|3EMK|B Chain B, 2.5a Crystal Structure Of GlucoseRIBITOL DEHYDROGENASE
From Brucella Melitensis
pdb|3EMK|C Chain C, 2.5a Crystal Structure Of GlucoseRIBITOL DEHYDROGENASE
From Brucella Melitensis
pdb|3EMK|D Chain D, 2.5a Crystal Structure Of GlucoseRIBITOL DEHYDROGENASE
From Brucella Melitensis
Length = 246
Score = 31.2 bits (69), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 31/59 (52%), Gaps = 6/59 (10%)
Query: 402 GKTEEQVKELGVEYRVGKFPFLANSRAKAIDDAEGIVKILAEKETDKILGVHIMAPNAG 460
G EE++KEL E F F AN + D E VK L +K +++ GV I+ NAG
Sbjct: 38 GTREEKLKELAAELGERIFVFPAN-----LSDREA-VKALGQKAEEEMGGVDILVNNAG 90
>pdb|3ENN|A Chain A, 2.1a Crystal Structure Of GlucoseRIBITOL DEHYDROGENASE
FROM BRUCELLA Melitensis (P43212)
pdb|3ENN|B Chain B, 2.1a Crystal Structure Of GlucoseRIBITOL DEHYDROGENASE
FROM BRUCELLA Melitensis (P43212)
pdb|3ENN|C Chain C, 2.1a Crystal Structure Of GlucoseRIBITOL DEHYDROGENASE
FROM BRUCELLA Melitensis (P43212)
pdb|3ENN|D Chain D, 2.1a Crystal Structure Of GlucoseRIBITOL DEHYDROGENASE
FROM BRUCELLA Melitensis (P43212)
Length = 249
Score = 30.8 bits (68), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 31/59 (52%), Gaps = 6/59 (10%)
Query: 402 GKTEEQVKELGVEYRVGKFPFLANSRAKAIDDAEGIVKILAEKETDKILGVHIMAPNAG 460
G EE++KEL E F F AN + D E VK L +K +++ GV I+ NAG
Sbjct: 41 GTREEKLKELAAELGERIFVFPAN-----LSDREA-VKALGQKAEEEMGGVDILVNNAG 93
>pdb|1F8R|A Chain A, Crystal Structure Of L-Amino Acid Oxidase From
Calloselasma Rhodostoma Complexed With Citrate
pdb|1F8R|B Chain B, Crystal Structure Of L-Amino Acid Oxidase From
Calloselasma Rhodostoma Complexed With Citrate
pdb|1F8R|C Chain C, Crystal Structure Of L-Amino Acid Oxidase From
Calloselasma Rhodostoma Complexed With Citrate
pdb|1F8R|D Chain D, Crystal Structure Of L-Amino Acid Oxidase From
Calloselasma Rhodostoma Complexed With Citrate
pdb|1F8S|A Chain A, Crystal Structure Of L-Amino Acid Oxidase From
Calloselasma Rhodostoma, Complexed With Three Molecules
Of O-Aminobenzoate.
pdb|1F8S|B Chain B, Crystal Structure Of L-Amino Acid Oxidase From
Calloselasma Rhodostoma, Complexed With Three Molecules
Of O-Aminobenzoate.
pdb|1F8S|C Chain C, Crystal Structure Of L-Amino Acid Oxidase From
Calloselasma Rhodostoma, Complexed With Three Molecules
Of O-Aminobenzoate.
pdb|1F8S|D Chain D, Crystal Structure Of L-Amino Acid Oxidase From
Calloselasma Rhodostoma, Complexed With Three Molecules
Of O-Aminobenzoate.
pdb|1F8S|E Chain E, Crystal Structure Of L-Amino Acid Oxidase From
Calloselasma Rhodostoma, Complexed With Three Molecules
Of O-Aminobenzoate.
pdb|1F8S|F Chain F, Crystal Structure Of L-Amino Acid Oxidase From
Calloselasma Rhodostoma, Complexed With Three Molecules
Of O-Aminobenzoate.
pdb|1F8S|G Chain G, Crystal Structure Of L-Amino Acid Oxidase From
Calloselasma Rhodostoma, Complexed With Three Molecules
Of O-Aminobenzoate.
pdb|1F8S|H Chain H, Crystal Structure Of L-Amino Acid Oxidase From
Calloselasma Rhodostoma, Complexed With Three Molecules
Of O-Aminobenzoate.
pdb|2IID|A Chain A, Structure Of L-Amino Acid Oxidase From Calloselasma
Rhodostoma In Complex With L-Phenylalanine
pdb|2IID|B Chain B, Structure Of L-Amino Acid Oxidase From Calloselasma
Rhodostoma In Complex With L-Phenylalanine
pdb|2IID|C Chain C, Structure Of L-Amino Acid Oxidase From Calloselasma
Rhodostoma In Complex With L-Phenylalanine
pdb|2IID|D Chain D, Structure Of L-Amino Acid Oxidase From Calloselasma
Rhodostoma In Complex With L-Phenylalanine
Length = 498
Score = 30.8 bits (68), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 15/31 (48%), Positives = 20/31 (64%)
Query: 214 PKKLVVIGAGYIGLEMGSVWARLGSEVTVVE 244
PK +V++GAG GL V A G +VTV+E
Sbjct: 33 PKHVVIVGAGMAGLSAAYVLAGAGHQVTVLE 63
>pdb|3KVE|A Chain A, Structure Of Native L-Amino Acid Oxidase From Vipera
Ammodytes Ammodytes: Stabilization Of The Quaternary
Structure By Divalent Ions And Structural Changes In The
Dynamic Active Site
pdb|3KVE|B Chain B, Structure Of Native L-Amino Acid Oxidase From Vipera
Ammodytes Ammodytes: Stabilization Of The Quaternary
Structure By Divalent Ions And Structural Changes In The
Dynamic Active Site
pdb|3KVE|C Chain C, Structure Of Native L-Amino Acid Oxidase From Vipera
Ammodytes Ammodytes: Stabilization Of The Quaternary
Structure By Divalent Ions And Structural Changes In The
Dynamic Active Site
pdb|3KVE|D Chain D, Structure Of Native L-Amino Acid Oxidase From Vipera
Ammodytes Ammodytes: Stabilization Of The Quaternary
Structure By Divalent Ions And Structural Changes In The
Dynamic Active Site
Length = 486
Score = 30.0 bits (66), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 20/31 (64%)
Query: 214 PKKLVVIGAGYIGLEMGSVWARLGSEVTVVE 244
PK +VV+GAG GL V A G +VTV+E
Sbjct: 33 PKHVVVVGAGMSGLSAAYVLAGAGHKVTVLE 63
>pdb|1REO|A Chain A, L-Amino Acid Oxidase From Agkistrodon Halys Pallas
pdb|1TDK|A Chain A, L-amino Acid Oxidase From Agkistrodon Halys In Complex
With Suicide Substrate L-vinylglycine
pdb|1TDN|A Chain A, L-Amino Acid Oxidase From Agkistrodon Halys In Complex
With L-Leucine
pdb|1TDO|A Chain A, L-Amino Acid Oxidae From Agkistrodon Halys In Complex With
L- Phenylalanine
Length = 486
Score = 29.6 bits (65), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 15/31 (48%), Positives = 20/31 (64%)
Query: 214 PKKLVVIGAGYIGLEMGSVWARLGSEVTVVE 244
PK +VV+GAG GL V + G +VTV+E
Sbjct: 33 PKHVVVVGAGMSGLSAAYVLSGAGHQVTVLE 63
>pdb|3MWD|A Chain A, Truncated Human Atp-Citrate Lyase With Citrate Bound
Length = 425
Score = 29.6 bits (65), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 28/50 (56%)
Query: 268 QKMKFMLKTKVVGVDLSGDGVKLTLEPAAGGEKTILEADVVLVSAGRTPF 317
Q +K K +VGV+L+ DGVK L+P G E T+ +A L + PF
Sbjct: 61 QLIKRRGKLGLVGVNLTLDGVKSWLKPRLGQEATVGKATGFLKNFLIEPF 110
>pdb|1JXA|A Chain A, Glucosamine 6-Phosphate Synthase With Glucose 6-Phosphate
pdb|1JXA|B Chain B, Glucosamine 6-Phosphate Synthase With Glucose 6-Phosphate
pdb|1JXA|C Chain C, Glucosamine 6-Phosphate Synthase With Glucose 6-Phosphate
pdb|2BPL|A Chain A, E.Coli Glucosamine-6p Synthase In Complex With Fructose-6p
pdb|2BPL|B Chain B, E.Coli Glucosamine-6p Synthase In Complex With Fructose-6p
pdb|2BPL|C Chain C, E.Coli Glucosamine-6p Synthase In Complex With Fructose-6p
Length = 608
Score = 29.3 bits (64), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 11/37 (29%), Positives = 21/37 (56%)
Query: 306 DVVLVSAGRTPFTAGLGLDKIGVETDKMGRIPVNERF 342
D +L + +P GLG+ + + +D++ +PV RF
Sbjct: 167 DTLLAARSGSPLVIGLGMGENFIASDQLALLPVTRRF 203
>pdb|2J6H|A Chain A, E. Coli Glucosamine-6-p Synthase In Complex With
Glucose-6p And 5-oxo-l-norleucine
pdb|2J6H|B Chain B, E. Coli Glucosamine-6-p Synthase In Complex With
Glucose-6p And 5-oxo-l-norleucine
pdb|2VF4|X Chain X, E. Coli Glucosamine-6-P Synthase
pdb|2VF5|X Chain X, Glucosamine-6-Phosphate Synthase In Complex With
Glucosamine-6-Phosphate
Length = 608
Score = 29.3 bits (64), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 11/37 (29%), Positives = 21/37 (56%)
Query: 306 DVVLVSAGRTPFTAGLGLDKIGVETDKMGRIPVNERF 342
D +L + +P GLG+ + + +D++ +PV RF
Sbjct: 167 DTLLAARSGSPLVIGLGMGENFIASDQLALLPVTRRF 203
>pdb|3OOJ|A Chain A, C1a Mutant Of E. Coli Glms In Complex With Glucose-6p And
Glutamate
pdb|3OOJ|B Chain B, C1a Mutant Of E. Coli Glms In Complex With Glucose-6p And
Glutamate
pdb|3OOJ|C Chain C, C1a Mutant Of E. Coli Glms In Complex With Glucose-6p And
Glutamate
pdb|3OOJ|D Chain D, C1a Mutant Of E. Coli Glms In Complex With Glucose-6p And
Glutamate
pdb|3OOJ|E Chain E, C1a Mutant Of E. Coli Glms In Complex With Glucose-6p And
Glutamate
pdb|3OOJ|F Chain F, C1a Mutant Of E. Coli Glms In Complex With Glucose-6p And
Glutamate
pdb|3OOJ|G Chain G, C1a Mutant Of E. Coli Glms In Complex With Glucose-6p And
Glutamate
pdb|3OOJ|H Chain H, C1a Mutant Of E. Coli Glms In Complex With Glucose-6p And
Glutamate
Length = 608
Score = 29.3 bits (64), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 11/37 (29%), Positives = 21/37 (56%)
Query: 306 DVVLVSAGRTPFTAGLGLDKIGVETDKMGRIPVNERF 342
D +L + +P GLG+ + + +D++ +PV RF
Sbjct: 167 DTLLAARSGSPLVIGLGMGENFIASDQLALLPVTRRF 203
>pdb|3PFF|A Chain A, Truncated Human Atp-Citrate Lyase With Adp And Tartrate
Bound
Length = 829
Score = 29.3 bits (64), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 28/50 (56%)
Query: 268 QKMKFMLKTKVVGVDLSGDGVKLTLEPAAGGEKTILEADVVLVSAGRTPF 317
Q +K K +VGV+L+ DGVK L+P G E T+ +A L + PF
Sbjct: 61 QLIKRRGKLGLVGVNLTLDGVKSWLKPRLGQEATVGKATGFLKNFLIEPF 110
>pdb|3MWE|A Chain A, Truncated Human Atp-Citrate Lyase With Tartrate Bound
Length = 425
Score = 29.3 bits (64), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 28/50 (56%)
Query: 268 QKMKFMLKTKVVGVDLSGDGVKLTLEPAAGGEKTILEADVVLVSAGRTPF 317
Q +K K +VGV+L+ DGVK L+P G E T+ +A L + PF
Sbjct: 61 QLIKRRGKLGLVGVNLTLDGVKSWLKPRLGQEATVGKATGFLKNFLIEPF 110
>pdb|3GJA|A Chain A, Cytc3
pdb|3GJA|B Chain B, Cytc3
pdb|3GJB|A Chain A, Cytc3 With Fe(Ii) And Alpha-Ketoglutarate
pdb|3GJB|B Chain B, Cytc3 With Fe(Ii) And Alpha-Ketoglutarate
Length = 319
Score = 29.3 bits (64), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 16/65 (24%), Positives = 29/65 (44%), Gaps = 2/65 (3%)
Query: 352 IGDVIPGPMLAHKAEEDGVACVEFLAGKHGHVDYDKVPGVVYTHPEVASVGKTEEQVKEL 411
IG + H E++G C++ + G H ++YD+ G+ Y + K +
Sbjct: 144 IGTITVWTAFTHSTEQNG--CLQLMPGTHTSMNYDESKGMDYDADAINQREKDGIKRGFF 201
Query: 412 GVEYR 416
G +YR
Sbjct: 202 GYDYR 206
>pdb|2VHW|A Chain A, Crystal Structure Of Holo L-Alanine Dehydrogenase From
Mycobacterium Tuberculosis In The Open And Closed
Conformation
pdb|2VHW|B Chain B, Crystal Structure Of Holo L-Alanine Dehydrogenase From
Mycobacterium Tuberculosis In The Open And Closed
Conformation
pdb|2VHW|C Chain C, Crystal Structure Of Holo L-Alanine Dehydrogenase From
Mycobacterium Tuberculosis In The Open And Closed
Conformation
pdb|2VHW|D Chain D, Crystal Structure Of Holo L-Alanine Dehydrogenase From
Mycobacterium Tuberculosis In The Open And Closed
Conformation
pdb|2VHW|E Chain E, Crystal Structure Of Holo L-Alanine Dehydrogenase From
Mycobacterium Tuberculosis In The Open And Closed
Conformation
pdb|2VHW|F Chain F, Crystal Structure Of Holo L-Alanine Dehydrogenase From
Mycobacterium Tuberculosis In The Open And Closed
Conformation
pdb|2VHX|A Chain A, Crystal Structure Of The Ternary Complex Of L-Alanine
Dehydrogenase From Mycobacterium Tuberculosis With Nad+
And Pyruvate
pdb|2VHX|B Chain B, Crystal Structure Of The Ternary Complex Of L-Alanine
Dehydrogenase From Mycobacterium Tuberculosis With Nad+
And Pyruvate
pdb|2VHX|C Chain C, Crystal Structure Of The Ternary Complex Of L-Alanine
Dehydrogenase From Mycobacterium Tuberculosis With Nad+
And Pyruvate
pdb|2VHX|D Chain D, Crystal Structure Of The Ternary Complex Of L-Alanine
Dehydrogenase From Mycobacterium Tuberculosis With Nad+
And Pyruvate
pdb|2VHX|E Chain E, Crystal Structure Of The Ternary Complex Of L-Alanine
Dehydrogenase From Mycobacterium Tuberculosis With Nad+
And Pyruvate
pdb|2VHX|F Chain F, Crystal Structure Of The Ternary Complex Of L-Alanine
Dehydrogenase From Mycobacterium Tuberculosis With Nad+
And Pyruvate
pdb|2VHY|A Chain A, Crystal Structure Of Apo L-Alanine Dehydrogenase From
Mycobacterium Tuberculosis
pdb|2VHY|B Chain B, Crystal Structure Of Apo L-Alanine Dehydrogenase From
Mycobacterium Tuberculosis
pdb|2VHZ|A Chain A, Crystal Structure Of Holo L-Alanine Dehydrogenase From
Mycobacterium Tuberculosis In The Closed Conformation
pdb|2VHZ|B Chain B, Crystal Structure Of Holo L-Alanine Dehydrogenase From
Mycobacterium Tuberculosis In The Closed Conformation
Length = 377
Score = 29.3 bits (64), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 15/44 (34%), Positives = 23/44 (52%)
Query: 214 PKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIVPSMDGEI 257
P +VVIGAG G + +G+ VTV++ D + +D E
Sbjct: 168 PADVVVIGAGTAGYNAARIANGMGATVTVLDINIDKLRQLDAEF 211
>pdb|2VOE|A Chain A, Crystal Structure Of Rv2780 From M. Tuberculosis H37rv
pdb|2VOE|B Chain B, Crystal Structure Of Rv2780 From M. Tuberculosis H37rv
pdb|2VOE|C Chain C, Crystal Structure Of Rv2780 From M. Tuberculosis H37rv
pdb|2VOE|D Chain D, Crystal Structure Of Rv2780 From M. Tuberculosis H37rv
pdb|2VOE|E Chain E, Crystal Structure Of Rv2780 From M. Tuberculosis H37rv
pdb|2VOE|F Chain F, Crystal Structure Of Rv2780 From M. Tuberculosis H37rv
pdb|2VOJ|A Chain A, Ternary Complex Of M. Tuberculosis Rv2780 With Nad And
Pyruvate
pdb|2VOJ|C Chain C, Ternary Complex Of M. Tuberculosis Rv2780 With Nad And
Pyruvate
pdb|2VOJ|E Chain E, Ternary Complex Of M. Tuberculosis Rv2780 With Nad And
Pyruvate
Length = 371
Score = 29.3 bits (64), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 15/44 (34%), Positives = 23/44 (52%)
Query: 214 PKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIVPSMDGEI 257
P +VVIGAG G + +G+ VTV++ D + +D E
Sbjct: 168 PADVVVIGAGTAGYNAARIANGMGATVTVLDINIDKLRQLDAEF 211
>pdb|2VHV|A Chain A, Crystal Structure Of The D270a Mutant Of L-Alanine
Dehydrogenase From Mycobacterium Tuberculosis In Complex
With Nadh.
pdb|2VHV|B Chain B, Crystal Structure Of The D270a Mutant Of L-Alanine
Dehydrogenase From Mycobacterium Tuberculosis In Complex
With Nadh
Length = 377
Score = 29.3 bits (64), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 15/44 (34%), Positives = 23/44 (52%)
Query: 214 PKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIVPSMDGEI 257
P +VVIGAG G + +G+ VTV++ D + +D E
Sbjct: 168 PADVVVIGAGTAGYNAARIANGMGATVTVLDINIDKLRQLDAEF 211
>pdb|2E7W|A Chain A, Crystal Structure Of The LrpASNC LIKE TRANSCRIPTIONAL
REGULATORS FROM Sulfolobus Tokodaii 7
pdb|2E7X|A Chain A, Structure Of The LrpASNC LIKE TRANSCRIPTIONAL REGULATOR
FROM Sulfolobus Tokodaii 7 Complexed With Its Cognate
Ligand
Length = 150
Score = 29.3 bits (64), Expect = 5.1, Method: Composition-based stats.
Identities = 16/52 (30%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
Query: 144 KKNKVTYVKGYGKFISPSEVSVDTIEGGNTVVK-GKNIIIATGSDVKSLPGI 194
K K +KGY +I+P+ +++D I + K GKN + G+ + +PG+
Sbjct: 40 KLEKDGVIKGYYAYINPASLNLDYIVITSVKAKYGKNYHVELGNKLAQIPGV 91
>pdb|2YX7|A Chain A, Crystals Structure Of T132a Mutant Of St1022 From
Sulfolobus Tokodaii 7
pdb|2PMH|A Chain A, Crystal Structure Of Thr132ala Of St1022 From Sulfolobus
Tokodaii
Length = 150
Score = 29.3 bits (64), Expect = 5.2, Method: Composition-based stats.
Identities = 16/52 (30%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
Query: 144 KKNKVTYVKGYGKFISPSEVSVDTIEGGNTVVK-GKNIIIATGSDVKSLPGI 194
K K +KGY +I+P+ +++D I + K GKN + G+ + +PG+
Sbjct: 40 KLEKDGVIKGYYAYINPASLNLDYIVITSVKAKYGKNYHVELGNKLAQIPGV 91
>pdb|2EFQ|A Chain A, Crystal Structure Of Thr134 To Ala Of St1022-Glutamine
Complex From Sulfolobus Tokodaii 7
pdb|2YX4|A Chain A, Crystal Structure Of T134a Of St1022 From Sulfolobus
Tokodaii
Length = 150
Score = 29.3 bits (64), Expect = 5.2, Method: Composition-based stats.
Identities = 16/52 (30%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
Query: 144 KKNKVTYVKGYGKFISPSEVSVDTIEGGNTVVK-GKNIIIATGSDVKSLPGI 194
K K +KGY +I+P+ +++D I + K GKN + G+ + +PG+
Sbjct: 40 KLEKDGVIKGYYAYINPASLNLDYIVITSVKAKYGKNYHVELGNKLAQIPGV 91
>pdb|2EFN|A Chain A, Crystal Structure Of Ser 32 To Ala Of St1022 From
Sulfolobus Tokodaii 7
pdb|2PN6|A Chain A, Crystal Structure Of S32a Of St1022-Gln Complex From
Sulfolobus Tokodaii
Length = 150
Score = 29.3 bits (64), Expect = 5.2, Method: Composition-based stats.
Identities = 16/52 (30%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
Query: 144 KKNKVTYVKGYGKFISPSEVSVDTIEGGNTVVK-GKNIIIATGSDVKSLPGI 194
K K +KGY +I+P+ +++D I + K GKN + G+ + +PG+
Sbjct: 40 KLEKDGVIKGYYAYINPASLNLDYIVITSVKAKYGKNYHVELGNKLAQIPGV 91
>pdb|2EFO|A Chain A, Crystal Structure Of Tyr77 To Ala Of St1022 From
Sulfolobus Tokodaii 7
pdb|2EFP|A Chain A, Crystal Structure Of Tyr77 To Ala Of St1022-Glutamine
Complex From Sulolobus Tokodaii 7
Length = 150
Score = 29.3 bits (64), Expect = 5.3, Method: Composition-based stats.
Identities = 16/52 (30%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
Query: 144 KKNKVTYVKGYGKFISPSEVSVDTIEGGNTVVK-GKNIIIATGSDVKSLPGI 194
K K +KGY +I+P+ +++D I + K GKN + G+ + +PG+
Sbjct: 40 KLEKDGVIKGYYAYINPASLNLDYIVITSVKAKYGKNAHVELGNKLAQIPGV 91
>pdb|1XFF|A Chain A, Glutaminase Domain Of Glucosamine 6-Phosphate Synthase
Complexed With Glutamate
pdb|1XFF|B Chain B, Glutaminase Domain Of Glucosamine 6-Phosphate Synthase
Complexed With Glutamate
pdb|1XFG|A Chain A, Glutaminase Domain Of Glucosamine 6-phosphate Synthase
Complexed With L-glu Hydroxamate
pdb|1XFG|B Chain B, Glutaminase Domain Of Glucosamine 6-phosphate Synthase
Complexed With L-glu Hydroxamate
Length = 240
Score = 28.9 bits (63), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 11/37 (29%), Positives = 21/37 (56%)
Query: 306 DVVLVSAGRTPFTAGLGLDKIGVETDKMGRIPVNERF 342
D +L + +P GLG+ + + +D++ +PV RF
Sbjct: 167 DTLLAARSGSPLVIGLGMGENFIASDQLALLPVTRRF 203
>pdb|3GG2|A Chain A, Crystal Structure Of Udp-Glucose 6-Dehydrogenase From
Porphyromonas Gingivalis Bound To Product
Udp-Glucuronate
pdb|3GG2|B Chain B, Crystal Structure Of Udp-Glucose 6-Dehydrogenase From
Porphyromonas Gingivalis Bound To Product
Udp-Glucuronate
pdb|3GG2|C Chain C, Crystal Structure Of Udp-Glucose 6-Dehydrogenase From
Porphyromonas Gingivalis Bound To Product
Udp-Glucuronate
pdb|3GG2|D Chain D, Crystal Structure Of Udp-Glucose 6-Dehydrogenase From
Porphyromonas Gingivalis Bound To Product
Udp-Glucuronate
Length = 450
Score = 28.5 bits (62), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 22/108 (20%), Positives = 48/108 (44%), Gaps = 31/108 (28%)
Query: 217 LVVIGAGYIGLEMGSVWARLGSEVTVV--------EFAADIVPSMDGEIRKQFQRSLEKQ 268
+ V+G GY+GL + +A LG+ V + + + +P + + K R+++
Sbjct: 5 IAVVGIGYVGLVSATCFAELGANVRCIDTDRNKIEQLNSGTIPIYEPGLEKMIARNVKAG 64
Query: 269 KMKFMLKTKVVGVDLSGDGVKLTLEPAAGGEKTILEADVVLVSAGRTP 316
+++F G ++ E+ + EAD++ ++ G TP
Sbjct: 65 RLRF-------GTEI---------------EQAVPEADIIFIAVG-TP 89
>pdb|3FS8|A Chain A, Crystal Structure Of Qdtc, The Dtdp-3-Amino-3,6-Dideoxy-D-
Glucose N-Acetyl Transferase From Thermoanaerobacterium
Thermosaccharolyticum In Complex With Acetyl-Coa
pdb|3FS8|B Chain B, Crystal Structure Of Qdtc, The Dtdp-3-Amino-3,6-Dideoxy-D-
Glucose N-Acetyl Transferase From Thermoanaerobacterium
Thermosaccharolyticum In Complex With Acetyl-Coa
pdb|3FSB|A Chain A, Crystal Structure Of Qdtc, The Dtdp-3-Amino-3,6-Dideoxy-D-
Glucose N-Acetyl Transferase From Thermoanaerobacterium
Thermosaccharolyticum In Complex With Coa And
Dtdp-3-Amino- Quinovose
pdb|3FSB|B Chain B, Crystal Structure Of Qdtc, The Dtdp-3-Amino-3,6-Dideoxy-D-
Glucose N-Acetyl Transferase From Thermoanaerobacterium
Thermosaccharolyticum In Complex With Coa And
Dtdp-3-Amino- Quinovose
pdb|3FSC|A Chain A, Crystal Structure Of Qdtc, The Dtdp-3-Amino-3,6-Dideoxy-D-
Glucose N-Acetyl Transferase From Thermoanaerobacterium
Thermosaccharolyticum In Complex With Coa And
Dtdp-3-Amino- Fucose
pdb|3FSC|B Chain B, Crystal Structure Of Qdtc, The Dtdp-3-Amino-3,6-Dideoxy-D-
Glucose N-Acetyl Transferase From Thermoanaerobacterium
Thermosaccharolyticum In Complex With Coa And
Dtdp-3-Amino- Fucose
Length = 273
Score = 28.5 bits (62), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 15/31 (48%), Positives = 22/31 (70%), Gaps = 1/31 (3%)
Query: 191 LPGITIDEKRIVSSTGALALNEVPKKLVVIG 221
LPGI I+E +V + GA+ +VPK+ VV+G
Sbjct: 186 LPGIHINEDALVGA-GAVVTKDVPKETVVVG 215
>pdb|4A7P|A Chain A, Se-Met Derivatized Ugdg, Udp-Glucose Dehydrogenase From
Sphingomonas Elodea
pdb|4A7P|B Chain B, Se-Met Derivatized Ugdg, Udp-Glucose Dehydrogenase From
Sphingomonas Elodea
Length = 446
Score = 28.5 bits (62), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 11/29 (37%), Positives = 18/29 (62%)
Query: 216 KLVVIGAGYIGLEMGSVWARLGSEVTVVE 244
++ IG GY+GL G+ ++ G EV V+
Sbjct: 10 RIAXIGTGYVGLVSGACFSDFGHEVVCVD 38
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.316 0.134 0.378
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,118,242
Number of Sequences: 62578
Number of extensions: 557629
Number of successful extensions: 2690
Number of sequences better than 100.0: 179
Number of HSP's better than 100.0 without gapping: 133
Number of HSP's successfully gapped in prelim test: 46
Number of HSP's that attempted gapping in prelim test: 2147
Number of HSP's gapped (non-prelim): 257
length of query: 477
length of database: 14,973,337
effective HSP length: 102
effective length of query: 375
effective length of database: 8,590,381
effective search space: 3221392875
effective search space used: 3221392875
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 53 (25.0 bits)