Query 011787
Match_columns 477
No_of_seqs 316 out of 2811
Neff 10.0
Searched_HMMs 29240
Date Mon Mar 25 15:18:58 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/011787.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/011787hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3urh_A Dihydrolipoyl dehydroge 100.0 2.8E-71 9.7E-76 562.7 50.7 437 37-473 19-457 (491)
2 4b1b_A TRXR, thioredoxin reduc 100.0 2.2E-72 7.5E-77 569.1 41.7 427 41-473 40-497 (542)
3 3lad_A Dihydrolipoamide dehydr 100.0 4.8E-69 1.6E-73 544.8 46.5 430 42-473 2-437 (476)
4 1zmd_A Dihydrolipoyl dehydroge 100.0 3.4E-67 1.2E-71 530.6 46.9 432 42-473 5-439 (474)
5 2qae_A Lipoamide, dihydrolipoy 100.0 5.6E-67 1.9E-71 528.2 48.3 430 43-473 2-434 (468)
6 1v59_A Dihydrolipoamide dehydr 100.0 3.9E-67 1.3E-71 531.1 46.4 432 42-473 4-444 (478)
7 1ojt_A Surface protein; redox- 100.0 5.5E-67 1.9E-71 529.7 46.3 431 40-473 3-443 (482)
8 1dxl_A Dihydrolipoamide dehydr 100.0 7.4E-67 2.5E-71 528.1 46.4 433 41-473 4-436 (470)
9 1ebd_A E3BD, dihydrolipoamide 100.0 8.6E-66 2.9E-70 517.7 49.4 425 43-473 3-427 (455)
10 2eq6_A Pyruvate dehydrogenase 100.0 8.9E-66 3E-70 518.1 47.3 421 43-473 6-427 (464)
11 2a8x_A Dihydrolipoyl dehydroge 100.0 4.5E-66 1.5E-70 521.0 45.1 426 43-473 3-430 (464)
12 3dk9_A Grase, GR, glutathione 100.0 1.1E-65 3.8E-70 520.1 45.9 424 41-473 18-454 (478)
13 3l8k_A Dihydrolipoyl dehydroge 100.0 1.5E-65 5.3E-70 516.9 44.8 417 42-473 3-430 (466)
14 3ic9_A Dihydrolipoamide dehydr 100.0 7.4E-66 2.5E-70 521.8 42.6 423 43-473 8-439 (492)
15 3qfa_A Thioredoxin reductase 1 100.0 3.9E-65 1.3E-69 519.5 48.2 432 39-473 28-479 (519)
16 4dna_A Probable glutathione re 100.0 2E-65 6.8E-70 515.9 45.1 419 42-473 4-426 (463)
17 1xdi_A RV3303C-LPDA; reductase 100.0 4.2E-65 1.4E-69 518.1 45.6 423 43-472 2-436 (499)
18 2wpf_A Trypanothione reductase 100.0 8.3E-65 2.8E-69 514.1 46.5 426 40-473 4-451 (495)
19 3dgz_A Thioredoxin reductase 2 100.0 9.5E-65 3.2E-69 514.1 46.0 430 42-473 5-451 (488)
20 3o0h_A Glutathione reductase; 100.0 7.2E-65 2.5E-69 514.5 44.3 420 42-473 25-446 (484)
21 2hqm_A GR, grase, glutathione 100.0 2.5E-64 8.4E-69 509.6 47.7 422 40-473 8-447 (479)
22 1fec_A Trypanothione reductase 100.0 2.7E-64 9.1E-69 510.1 47.8 424 42-473 2-447 (490)
23 1ges_A Glutathione reductase; 100.0 6.7E-65 2.3E-69 509.7 42.9 417 42-473 3-426 (450)
24 1zk7_A HGII, reductase, mercur 100.0 5.9E-64 2E-68 506.0 49.7 424 41-473 2-428 (467)
25 2yqu_A 2-oxoglutarate dehydrog 100.0 2.1E-64 7E-69 507.7 43.2 421 43-473 1-421 (455)
26 2r9z_A Glutathione amide reduc 100.0 6.7E-64 2.3E-68 503.9 45.6 417 41-473 2-424 (463)
27 1lvl_A Dihydrolipoamide dehydr 100.0 3.5E-64 1.2E-68 505.6 42.1 418 42-473 4-424 (458)
28 3dgh_A TRXR-1, thioredoxin red 100.0 1.5E-63 5E-68 505.0 46.8 425 42-473 8-451 (483)
29 1onf_A GR, grase, glutathione 100.0 2.7E-62 9.4E-67 496.9 45.3 417 43-473 2-472 (500)
30 1mo9_A ORF3; nucleotide bindin 100.0 1.1E-62 3.8E-67 502.3 39.5 418 39-473 39-488 (523)
31 2x8g_A Thioredoxin glutathione 100.0 5.3E-58 1.8E-62 476.1 46.9 427 41-473 105-558 (598)
32 4eqs_A Coenzyme A disulfide re 100.0 3.8E-56 1.3E-60 443.6 32.5 379 45-473 2-405 (437)
33 3kd9_A Coenzyme A disulfide re 100.0 7.9E-55 2.7E-59 437.2 37.0 380 43-473 3-409 (449)
34 3oc4_A Oxidoreductase, pyridin 100.0 3.4E-54 1.2E-58 432.7 37.0 380 44-473 3-407 (452)
35 3iwa_A FAD-dependent pyridine 100.0 8.3E-54 2.8E-58 432.5 35.0 390 43-473 3-426 (472)
36 3ics_A Coenzyme A-disulfide re 100.0 3.4E-53 1.2E-57 439.4 34.9 403 19-473 17-449 (588)
37 3ntd_A FAD-dependent pyridine 100.0 5.1E-53 1.7E-57 436.8 34.5 384 44-473 2-433 (565)
38 3cgb_A Pyridine nucleotide-dis 100.0 1.4E-51 4.9E-56 416.4 41.0 381 43-473 36-448 (480)
39 2cdu_A NADPH oxidase; flavoenz 100.0 7.6E-52 2.6E-56 415.9 38.7 384 44-473 1-412 (452)
40 2bc0_A NADH oxidase; flavoprot 100.0 1.5E-51 5.1E-56 417.3 39.5 382 43-472 35-456 (490)
41 1nhp_A NADH peroxidase; oxidor 100.0 6.7E-51 2.3E-55 408.4 37.1 380 44-473 1-411 (447)
42 2v3a_A Rubredoxin reductase; a 100.0 2.8E-48 9.6E-53 381.8 26.5 360 41-467 2-377 (384)
43 1xhc_A NADH oxidase /nitrite r 100.0 9.7E-47 3.3E-51 367.4 20.7 334 43-460 8-354 (367)
44 3klj_A NAD(FAD)-dependent dehy 100.0 7.6E-45 2.6E-49 355.7 23.0 345 40-471 6-367 (385)
45 2gqw_A Ferredoxin reductase; f 100.0 1.1E-43 3.9E-48 351.2 29.2 352 42-471 6-382 (408)
46 1q1r_A Putidaredoxin reductase 100.0 2.6E-43 9.1E-48 350.8 27.2 363 43-472 4-394 (431)
47 3lxd_A FAD-dependent pyridine 100.0 2.5E-41 8.6E-46 335.7 35.2 349 42-459 8-383 (415)
48 3ef6_A Toluene 1,2-dioxygenase 100.0 2.2E-42 7.6E-47 342.3 26.8 347 44-460 3-372 (410)
49 3fg2_P Putative rubredoxin red 100.0 5.6E-41 1.9E-45 331.9 32.2 349 44-459 2-372 (404)
50 4gcm_A TRXR, thioredoxin reduc 100.0 7.4E-41 2.5E-45 319.9 30.5 293 42-378 5-303 (312)
51 4a5l_A Thioredoxin reductase; 100.0 1.5E-40 5E-45 318.2 22.8 299 40-377 1-308 (314)
52 2q7v_A Thioredoxin reductase; 100.0 9.8E-39 3.3E-43 307.0 29.0 295 41-378 6-309 (325)
53 1m6i_A Programmed cell death p 100.0 6.6E-39 2.2E-43 324.3 27.2 327 39-390 7-361 (493)
54 3f8d_A Thioredoxin reductase ( 100.0 1.7E-38 5.8E-43 304.9 28.5 292 43-378 15-314 (323)
55 2q0l_A TRXR, thioredoxin reduc 100.0 5.3E-38 1.8E-42 300.0 28.7 293 43-378 1-306 (311)
56 3cty_A Thioredoxin reductase; 100.0 7.7E-38 2.6E-42 300.0 29.6 294 40-378 13-313 (319)
57 1fl2_A Alkyl hydroperoxide red 100.0 1.2E-37 4E-42 297.4 29.6 290 43-378 1-302 (310)
58 3r9u_A Thioredoxin reductase; 100.0 5.3E-38 1.8E-42 300.4 27.1 296 42-378 3-309 (315)
59 4g6h_A Rotenone-insensitive NA 100.0 5.5E-39 1.9E-43 324.3 21.2 298 40-377 39-397 (502)
60 2zbw_A Thioredoxin reductase; 100.0 2.9E-38 1E-42 305.0 23.2 300 40-378 2-314 (335)
61 4fk1_A Putative thioredoxin re 100.0 3.2E-38 1.1E-42 300.3 22.9 284 40-377 3-296 (304)
62 3itj_A Thioredoxin reductase 1 100.0 7.7E-38 2.6E-42 302.4 23.7 296 40-378 19-332 (338)
63 1trb_A Thioredoxin reductase; 100.0 2.3E-37 7.9E-42 296.8 24.9 295 42-378 4-311 (320)
64 2a87_A TRXR, TR, thioredoxin r 100.0 5.3E-37 1.8E-41 296.1 24.5 296 40-378 11-313 (335)
65 3fbs_A Oxidoreductase; structu 100.0 4.1E-37 1.4E-41 291.7 22.5 279 43-378 2-289 (297)
66 3lzw_A Ferredoxin--NADP reduct 100.0 1.5E-37 5E-42 299.7 18.8 292 43-378 7-312 (332)
67 3ab1_A Ferredoxin--NADP reduct 100.0 7.4E-37 2.5E-41 298.2 23.2 300 40-379 11-326 (360)
68 1vdc_A NTR, NADPH dependent th 100.0 2E-36 6.7E-41 292.0 25.3 294 42-378 7-320 (333)
69 1hyu_A AHPF, alkyl hydroperoxi 100.0 8.9E-36 3E-40 303.2 30.3 292 41-378 210-513 (521)
70 1gte_A Dihydropyrimidine dehyd 100.0 2.4E-36 8.3E-41 329.0 13.6 309 42-403 186-533 (1025)
71 2vdc_G Glutamate synthase [NAD 100.0 3.5E-36 1.2E-40 299.9 13.5 282 41-378 120-441 (456)
72 3d1c_A Flavin-containing putat 100.0 1.3E-34 4.5E-39 283.2 22.4 311 43-379 4-337 (369)
73 4a9w_A Monooxygenase; baeyer-v 100.0 4.3E-34 1.5E-38 278.1 22.6 303 43-379 3-350 (357)
74 3sx6_A Sulfide-quinone reducta 100.0 5.1E-34 1.7E-38 284.9 19.4 289 42-377 3-340 (437)
75 3hyw_A Sulfide-quinone reducta 100.0 4.5E-34 1.5E-38 284.4 18.1 287 44-378 3-330 (430)
76 1lqt_A FPRA; NADP+ derivative, 100.0 3.5E-33 1.2E-37 278.8 16.8 281 43-378 3-384 (456)
77 3h8l_A NADH oxidase; membrane 100.0 4.7E-33 1.6E-37 275.8 17.3 284 44-379 2-334 (409)
78 3h28_A Sulfide-quinone reducta 100.0 2E-32 7E-37 272.8 20.0 284 44-378 3-330 (430)
79 1cjc_A Protein (adrenodoxin re 100.0 8.5E-33 2.9E-37 276.3 16.3 281 43-378 6-392 (460)
80 3k30_A Histamine dehydrogenase 100.0 7.9E-33 2.7E-37 290.8 16.4 296 14-379 363-673 (690)
81 2xve_A Flavin-containing monoo 100.0 3.3E-31 1.1E-35 265.9 27.2 308 44-380 3-340 (464)
82 3s5w_A L-ornithine 5-monooxyge 100.0 1.5E-30 5.2E-35 262.2 29.8 316 42-377 29-445 (463)
83 1o94_A Tmadh, trimethylamine d 100.0 1.4E-32 4.8E-37 289.9 15.1 315 14-390 361-706 (729)
84 3vrd_B FCCB subunit, flavocyto 100.0 3.8E-33 1.3E-37 275.9 10.1 284 44-377 3-320 (401)
85 2gag_A Heterotetrameric sarcos 100.0 5.7E-31 2E-35 284.9 21.2 280 42-378 127-441 (965)
86 2gv8_A Monooxygenase; FMO, FAD 100.0 2.7E-30 9.3E-35 258.7 22.4 300 42-379 5-360 (447)
87 1ps9_A 2,4-dienoyl-COA reducta 100.0 6.1E-30 2.1E-34 268.2 22.0 280 15-376 351-671 (671)
88 1y56_A Hypothetical protein PH 100.0 6.7E-29 2.3E-33 251.0 18.1 255 42-379 107-375 (493)
89 3gwf_A Cyclohexanone monooxyge 100.0 6.5E-28 2.2E-32 245.4 21.5 303 42-377 7-453 (540)
90 3uox_A Otemo; baeyer-villiger 100.0 6.3E-27 2.2E-31 238.4 23.3 195 41-249 7-220 (545)
91 4ap3_A Steroid monooxygenase; 99.9 1.4E-25 4.7E-30 228.7 24.0 193 41-253 19-231 (549)
92 1w4x_A Phenylacetone monooxyge 99.9 1.5E-25 5E-30 229.4 17.7 308 42-378 15-463 (542)
93 2ywl_A Thioredoxin reductase r 99.9 2E-23 6.7E-28 182.3 14.6 152 216-379 3-169 (180)
94 4b63_A L-ornithine N5 monooxyg 99.9 5.2E-20 1.8E-24 186.1 23.3 216 162-378 185-484 (501)
95 2e5v_A L-aspartate oxidase; ar 99.8 1E-21 3.6E-26 197.0 3.3 303 45-376 1-364 (472)
96 2gqf_A Hypothetical protein HI 99.7 1.8E-18 6E-23 169.7 6.0 201 42-255 3-267 (401)
97 3fpz_A Thiazole biosynthetic e 99.7 1.6E-20 5.4E-25 179.8 -10.1 247 42-378 64-322 (326)
98 3k7m_X 6-hydroxy-L-nicotine ox 99.6 7.3E-17 2.5E-21 160.6 1.7 97 254-357 203-307 (431)
99 2cul_A Glucose-inhibited divis 99.6 5.3E-15 1.8E-19 134.0 11.1 157 215-378 4-229 (232)
100 3ces_A MNMG, tRNA uridine 5-ca 99.6 1.8E-14 6.1E-19 146.6 15.3 167 42-244 27-220 (651)
101 2zxi_A TRNA uridine 5-carboxym 99.4 4.8E-13 1.6E-17 135.6 13.6 174 42-244 26-219 (637)
102 3nlc_A Uncharacterized protein 99.4 4.1E-12 1.4E-16 128.3 15.8 142 42-188 106-277 (549)
103 1chu_A Protein (L-aspartate ox 99.3 4.4E-12 1.5E-16 128.9 11.9 39 42-81 7-45 (540)
104 1rp0_A ARA6, thiazole biosynth 99.3 5.7E-12 1.9E-16 117.6 11.4 165 215-379 40-273 (284)
105 1kf6_A Fumarate reductase flav 99.3 7.6E-12 2.6E-16 128.7 10.1 36 43-78 5-42 (602)
106 3v76_A Flavoprotein; structura 99.2 5.1E-11 1.8E-15 117.0 12.9 57 255-317 132-188 (417)
107 3cp8_A TRNA uridine 5-carboxym 99.2 1.2E-11 4E-16 126.0 4.9 171 41-244 19-214 (641)
108 3gyx_A Adenylylsulfate reducta 99.2 1.6E-10 5.4E-15 119.6 13.1 38 43-80 22-65 (662)
109 3dme_A Conserved exported prot 99.1 8.9E-10 3.1E-14 106.7 15.9 60 254-316 149-209 (369)
110 2cul_A Glucose-inhibited divis 99.1 4.9E-10 1.7E-14 101.1 10.7 119 43-189 3-126 (232)
111 2ywl_A Thioredoxin reductase r 99.0 1.2E-09 4.2E-14 94.3 11.1 108 43-188 1-110 (180)
112 1y56_B Sarcosine oxidase; dehy 99.0 8.9E-09 3.1E-13 100.2 17.9 57 254-316 148-205 (382)
113 3oz2_A Digeranylgeranylglycero 99.0 3.2E-09 1.1E-13 103.7 14.1 60 256-316 103-162 (397)
114 1rp0_A ARA6, thiazole biosynth 99.0 5.5E-09 1.9E-13 97.3 13.5 132 42-189 38-192 (284)
115 1y0p_A Fumarate reductase flav 99.0 1.6E-09 5.6E-14 111.2 10.2 41 43-83 126-166 (571)
116 3cgv_A Geranylgeranyl reductas 99.0 6E-09 2E-13 102.0 13.9 59 256-316 103-162 (397)
117 3ps9_A TRNA 5-methylaminomethy 98.9 1.5E-08 5E-13 106.3 16.7 59 254-317 416-474 (676)
118 3nix_A Flavoprotein/dehydrogen 98.9 1.3E-08 4.5E-13 100.5 15.3 60 256-316 107-166 (421)
119 4dgk_A Phytoene dehydrogenase; 98.9 1.1E-08 3.7E-13 103.5 14.9 55 256-315 222-277 (501)
120 3pvc_A TRNA 5-methylaminomethy 98.9 2.8E-08 9.7E-13 104.3 18.3 58 254-316 411-469 (689)
121 2gf3_A MSOX, monomeric sarcosi 98.9 5.1E-08 1.7E-12 95.1 18.7 71 239-317 136-206 (389)
122 2i0z_A NAD(FAD)-utilizing dehy 98.9 6.6E-09 2.2E-13 103.4 12.4 137 43-188 26-191 (447)
123 3dje_A Fructosyl amine: oxygen 98.9 9.6E-09 3.3E-13 102.0 13.1 57 255-316 161-221 (438)
124 2oln_A NIKD protein; flavoprot 98.9 4.6E-08 1.6E-12 95.7 17.4 55 255-315 153-207 (397)
125 1qo8_A Flavocytochrome C3 fuma 98.9 2.3E-09 8E-14 109.9 8.5 41 42-82 120-160 (566)
126 3rp8_A Flavoprotein monooxygen 98.9 6.2E-09 2.1E-13 102.4 10.7 56 256-318 128-183 (407)
127 3alj_A 2-methyl-3-hydroxypyrid 98.9 7.7E-09 2.6E-13 100.6 10.7 136 42-188 10-160 (379)
128 2bry_A NEDD9 interacting prote 98.9 6.9E-09 2.4E-13 104.5 10.4 125 41-189 90-231 (497)
129 2uzz_A N-methyl-L-tryptophan o 98.9 6.6E-08 2.3E-12 93.7 16.9 56 255-316 149-204 (372)
130 2gag_B Heterotetrameric sarcos 98.8 7.5E-08 2.6E-12 94.4 17.2 56 255-316 174-230 (405)
131 3jsk_A Cypbp37 protein; octame 98.8 6.1E-09 2.1E-13 98.1 8.8 49 43-91 79-129 (344)
132 1ryi_A Glycine oxidase; flavop 98.8 5.2E-08 1.8E-12 94.8 15.3 58 254-317 163-220 (382)
133 4at0_A 3-ketosteroid-delta4-5a 98.8 2.6E-08 8.9E-13 100.8 13.3 42 42-83 40-81 (510)
134 3i3l_A Alkylhalidase CMLS; fla 98.8 2E-08 6.9E-13 102.9 12.3 38 41-78 21-58 (591)
135 2bry_A NEDD9 interacting prote 98.8 6E-10 2E-14 112.3 0.8 107 213-319 91-233 (497)
136 3e1t_A Halogenase; flavoprotei 98.8 2.3E-08 7.9E-13 101.3 12.2 61 256-317 112-173 (512)
137 3nyc_A D-arginine dehydrogenas 98.8 1.5E-07 5.1E-12 91.4 16.3 56 255-316 154-209 (381)
138 3pl8_A Pyranose 2-oxidase; sub 98.8 6.9E-10 2.4E-14 114.5 -0.9 64 266-329 271-337 (623)
139 3ka7_A Oxidoreductase; structu 98.7 1.3E-07 4.5E-12 93.3 15.5 56 255-316 196-252 (425)
140 1d4d_A Flavocytochrome C fumar 98.7 1.7E-08 5.9E-13 103.4 9.0 41 42-82 125-165 (572)
141 1pj5_A N,N-dimethylglycine oxi 98.7 1.3E-07 4.4E-12 101.5 16.0 56 254-315 150-206 (830)
142 3c96_A Flavin-containing monoo 98.7 1.5E-07 5.2E-12 92.5 15.3 62 256-318 108-171 (410)
143 3da1_A Glycerol-3-phosphate de 98.7 2.4E-07 8.2E-12 94.6 17.1 63 254-316 169-232 (561)
144 3kkj_A Amine oxidase, flavin-c 98.7 9.4E-09 3.2E-13 95.1 5.5 40 44-83 3-42 (336)
145 2wdq_A Succinate dehydrogenase 98.7 6.5E-08 2.2E-12 99.2 11.1 62 255-316 143-206 (588)
146 1yvv_A Amine oxidase, flavin-c 98.7 1.3E-07 4.4E-12 90.2 12.3 41 43-83 2-42 (336)
147 2x3n_A Probable FAD-dependent 98.7 1.1E-07 3.7E-12 93.1 11.7 36 43-78 6-41 (399)
148 4a9w_A Monooxygenase; baeyer-v 98.7 2.2E-07 7.4E-12 89.2 13.3 95 215-315 4-131 (357)
149 2vou_A 2,6-dihydroxypyridine h 98.6 2.4E-08 8.3E-13 97.8 5.5 37 41-77 3-39 (397)
150 2gmh_A Electron transfer flavo 98.6 1.1E-07 3.8E-12 97.6 10.5 41 43-83 35-81 (584)
151 2qa1_A PGAE, polyketide oxygen 98.6 8.7E-08 3E-12 96.5 9.5 41 39-79 7-47 (500)
152 2e4g_A Tryptophan halogenase; 98.6 1.6E-07 5.3E-12 96.0 11.0 58 255-318 194-254 (550)
153 3f8d_A Thioredoxin reductase ( 98.6 2.2E-07 7.7E-12 87.8 11.3 100 215-320 16-129 (323)
154 3lzw_A Ferredoxin--NADP reduct 98.6 1.8E-07 6.1E-12 88.9 10.5 100 215-320 8-130 (332)
155 3ihg_A RDME; flavoenzyme, anth 98.6 4.5E-07 1.5E-11 92.4 14.0 39 41-79 3-41 (535)
156 3qj4_A Renalase; FAD/NAD(P)-bi 98.6 1.9E-07 6.6E-12 89.3 10.2 40 44-83 2-44 (342)
157 3atr_A Conserved archaeal prot 98.6 4E-08 1.4E-12 97.9 5.5 37 41-77 4-40 (453)
158 2h88_A Succinate dehydrogenase 98.6 1.9E-07 6.4E-12 96.1 10.3 38 42-79 17-54 (621)
159 4gut_A Lysine-specific histone 98.6 4.4E-09 1.5E-13 110.7 -1.9 41 41-81 334-374 (776)
160 3itj_A Thioredoxin reductase 1 98.6 3.5E-07 1.2E-11 87.1 11.6 104 214-320 22-146 (338)
161 2bs2_A Quinol-fumarate reducta 98.6 2E-07 6.8E-12 96.6 10.5 37 42-78 4-40 (660)
162 2zbw_A Thioredoxin reductase; 98.6 7.2E-07 2.5E-11 84.9 13.7 96 215-315 6-120 (335)
163 3fmw_A Oxygenase; mithramycin, 98.6 7.1E-08 2.4E-12 98.6 7.0 38 42-79 48-85 (570)
164 2qcu_A Aerobic glycerol-3-phos 98.5 2E-06 6.7E-11 86.8 17.4 63 254-316 148-210 (501)
165 2gjc_A Thiazole biosynthetic e 98.5 5.9E-08 2E-12 90.9 5.7 39 43-81 65-105 (326)
166 2xve_A Flavin-containing monoo 98.5 7.3E-07 2.5E-11 88.9 13.9 106 215-320 3-172 (464)
167 2xdo_A TETX2 protein; tetracyc 98.5 7.2E-07 2.5E-11 87.2 13.5 37 42-78 25-61 (398)
168 3axb_A Putative oxidoreductase 98.5 3.2E-07 1.1E-11 91.2 11.1 37 42-78 22-59 (448)
169 3fbs_A Oxidoreductase; structu 98.5 5.3E-07 1.8E-11 84.2 11.7 99 215-319 3-115 (297)
170 1k0i_A P-hydroxybenzoate hydro 98.5 1.2E-07 4E-12 92.7 7.4 35 43-77 2-36 (394)
171 2aqj_A Tryptophan halogenase, 98.5 5.9E-07 2E-11 91.5 12.5 35 42-76 4-41 (538)
172 2qa2_A CABE, polyketide oxygen 98.5 5.4E-07 1.8E-11 90.7 11.9 39 41-79 10-48 (499)
173 2q0l_A TRXR, thioredoxin reduc 98.5 8.9E-07 3E-11 83.3 12.7 99 216-320 3-118 (311)
174 3c4n_A Uncharacterized protein 98.5 5.5E-07 1.9E-11 88.3 11.3 38 42-79 35-74 (405)
175 2gv8_A Monooxygenase; FMO, FAD 98.5 1.3E-06 4.3E-11 86.9 13.8 106 214-319 6-182 (447)
176 2rgh_A Alpha-glycerophosphate 98.5 1.5E-06 5.2E-11 88.9 14.6 62 254-315 187-249 (571)
177 2dkh_A 3-hydroxybenzoate hydro 98.5 4.3E-07 1.5E-11 94.4 10.6 40 40-79 29-69 (639)
178 3ab1_A Ferredoxin--NADP reduct 98.5 1.5E-06 5.1E-11 83.7 13.5 98 214-316 14-131 (360)
179 3nlc_A Uncharacterized protein 98.5 8.6E-07 3E-11 89.5 12.1 99 214-317 107-278 (549)
180 3klj_A NAD(FAD)-dependent dehy 98.4 6.1E-07 2.1E-11 87.1 10.2 99 215-320 10-120 (385)
181 4gde_A UDP-galactopyranose mut 98.4 8.5E-08 2.9E-12 97.2 4.1 41 43-83 10-51 (513)
182 2q7v_A Thioredoxin reductase; 98.4 2E-06 6.7E-11 81.6 12.5 99 215-319 9-126 (325)
183 2gqf_A Hypothetical protein HI 98.4 2.1E-06 7.3E-11 83.7 12.5 97 215-317 5-169 (401)
184 1v0j_A UDP-galactopyranose mut 98.4 2.2E-07 7.5E-12 90.9 5.2 46 40-85 4-50 (399)
185 3d1c_A Flavin-containing putat 98.4 2.9E-06 9.8E-11 81.9 13.1 97 215-317 5-144 (369)
186 2bcg_G Secretory pathway GDP d 98.4 2.7E-07 9.2E-12 91.8 5.8 45 40-84 8-52 (453)
187 3r9u_A Thioredoxin reductase; 98.4 1.7E-06 5.8E-11 81.4 10.9 99 214-320 4-122 (315)
188 3alj_A 2-methyl-3-hydroxypyrid 98.4 2.5E-06 8.6E-11 82.7 12.2 97 214-318 11-162 (379)
189 3sx6_A Sulfide-quinone reducta 98.4 3E-07 1E-11 91.1 5.6 98 215-320 5-116 (437)
190 1jnr_A Adenylylsulfate reducta 98.4 2.8E-06 9.7E-11 88.1 13.0 58 258-315 154-217 (643)
191 1fl2_A Alkyl hydroperoxide red 98.3 1.5E-06 5.3E-11 81.6 10.1 99 216-319 3-118 (310)
192 2e1m_A L-glutamate oxidase; L- 98.3 4.1E-07 1.4E-11 87.4 5.9 49 37-85 38-87 (376)
193 3h8l_A NADH oxidase; membrane 98.3 3.3E-07 1.1E-11 90.0 5.1 101 215-319 2-116 (409)
194 2pyx_A Tryptophan halogenase; 98.3 1.4E-06 4.7E-11 88.5 9.8 35 42-76 6-52 (526)
195 2x3n_A Probable FAD-dependent 98.3 2.1E-06 7.2E-11 83.9 10.5 99 215-318 7-168 (399)
196 3oc4_A Oxidoreductase, pyridin 98.3 1.4E-06 5E-11 86.6 9.3 102 215-320 3-119 (452)
197 3cty_A Thioredoxin reductase; 98.3 3.8E-06 1.3E-10 79.3 11.7 98 215-319 17-129 (319)
198 2r0c_A REBC; flavin adenine di 98.3 3.3E-06 1.1E-10 86.1 12.0 37 43-79 26-62 (549)
199 4ap3_A Steroid monooxygenase; 98.3 2.2E-06 7.6E-11 87.1 10.5 100 215-319 22-164 (549)
200 1xhc_A NADH oxidase /nitrite r 98.3 9.2E-07 3.2E-11 85.3 7.4 99 213-320 7-117 (367)
201 1trb_A Thioredoxin reductase; 98.3 3.3E-06 1.1E-10 79.7 11.1 99 215-320 6-120 (320)
202 3ef6_A Toluene 1,2-dioxygenase 98.3 2.2E-06 7.7E-11 84.0 10.2 99 215-320 3-115 (410)
203 3gwf_A Cyclohexanone monooxyge 98.3 4.7E-06 1.6E-10 84.5 12.7 100 215-319 9-152 (540)
204 3hdq_A UDP-galactopyranose mut 98.3 5.8E-07 2E-11 87.0 5.7 45 40-84 26-70 (397)
205 3hyw_A Sulfide-quinone reducta 98.3 3E-07 1E-11 90.9 3.6 97 214-318 2-111 (430)
206 2yqu_A 2-oxoglutarate dehydrog 98.3 8.3E-06 2.8E-10 81.1 14.1 97 43-190 167-266 (455)
207 1vdc_A NTR, NADPH dependent th 98.3 2.3E-06 8E-11 81.3 9.6 99 215-320 9-128 (333)
208 1s3e_A Amine oxidase [flavin-c 98.3 4.9E-07 1.7E-11 91.8 5.0 43 42-84 3-45 (520)
209 2a87_A TRXR, TR, thioredoxin r 98.3 4.8E-06 1.6E-10 79.2 11.4 100 214-320 14-130 (335)
210 4hb9_A Similarities with proba 98.3 4.4E-06 1.5E-10 81.8 11.4 35 44-78 2-36 (412)
211 2vou_A 2,6-dihydroxypyridine h 98.3 3.7E-06 1.3E-10 82.1 10.7 100 214-318 5-155 (397)
212 3nrn_A Uncharacterized protein 98.2 6.7E-07 2.3E-11 88.1 5.3 41 44-84 1-41 (421)
213 3h28_A Sulfide-quinone reducta 98.2 5.3E-07 1.8E-11 89.1 4.5 97 215-319 3-112 (430)
214 1q1r_A Putidaredoxin reductase 98.2 1.8E-06 6.1E-11 85.3 8.2 100 214-320 4-118 (431)
215 2b9w_A Putative aminooxidase; 98.2 8.9E-07 3.1E-11 87.3 6.1 43 42-84 5-48 (424)
216 2yg5_A Putrescine oxidase; oxi 98.2 5E-07 1.7E-11 90.0 4.1 43 42-84 4-46 (453)
217 1yvv_A Amine oxidase, flavin-c 98.2 8.5E-06 2.9E-10 77.4 12.4 96 215-316 3-162 (336)
218 1rsg_A FMS1 protein; FAD bindi 98.2 5.7E-07 2E-11 91.1 3.9 42 42-83 7-49 (516)
219 2jae_A L-amino acid oxidase; o 98.2 1.4E-06 4.8E-11 87.7 6.6 43 40-82 8-50 (489)
220 4fk1_A Putative thioredoxin re 98.2 9E-06 3.1E-10 76.2 11.7 100 216-320 8-121 (304)
221 3uox_A Otemo; baeyer-villiger 98.2 4.5E-06 1.5E-10 84.8 10.1 100 215-319 10-152 (545)
222 3vrd_B FCCB subunit, flavocyto 98.2 1.1E-06 3.7E-11 86.0 5.4 99 214-320 2-112 (401)
223 2weu_A Tryptophan 5-halogenase 98.2 4.9E-06 1.7E-10 84.1 10.4 33 44-76 3-38 (511)
224 3fg2_P Putative rubredoxin red 98.2 2.1E-06 7.2E-11 84.1 7.3 98 215-320 2-114 (404)
225 4eqs_A Coenzyme A disulfide re 98.2 3.2E-06 1.1E-10 83.6 8.6 103 216-320 2-120 (437)
226 1hyu_A AHPF, alkyl hydroperoxi 98.2 6.8E-06 2.3E-10 83.2 11.1 101 214-319 212-329 (521)
227 2i0z_A NAD(FAD)-utilizing dehy 98.2 8.3E-06 2.8E-10 80.9 11.5 97 215-316 27-191 (447)
228 3i6d_A Protoporphyrinogen oxid 98.2 6.3E-07 2.1E-11 89.6 3.3 42 43-84 5-52 (470)
229 3ntd_A FAD-dependent pyridine 98.2 3.8E-06 1.3E-10 86.1 9.2 104 215-320 2-121 (565)
230 3atr_A Conserved archaeal prot 98.2 1.1E-05 3.9E-10 80.1 12.3 104 215-318 7-164 (453)
231 3lxd_A FAD-dependent pyridine 98.2 2.7E-06 9.1E-11 83.6 7.5 100 214-320 9-123 (415)
232 2vvm_A Monoamine oxidase N; FA 98.2 1.2E-06 4E-11 88.3 5.1 56 255-315 255-311 (495)
233 3iwa_A FAD-dependent pyridine 98.2 5.5E-06 1.9E-10 82.9 9.9 104 215-320 4-129 (472)
234 1lvl_A Dihydrolipoamide dehydr 98.2 3.4E-06 1.2E-10 84.0 8.2 99 43-190 171-270 (458)
235 4a5l_A Thioredoxin reductase; 98.2 1.3E-05 4.3E-10 75.4 11.7 100 215-320 5-125 (314)
236 3kd9_A Coenzyme A disulfide re 98.2 5E-06 1.7E-10 82.6 9.4 101 214-320 3-118 (449)
237 3ics_A Coenzyme A-disulfide re 98.1 5.3E-06 1.8E-10 85.4 9.6 105 214-320 36-156 (588)
238 1i8t_A UDP-galactopyranose mut 98.1 1.3E-06 4.4E-11 84.3 4.5 42 43-84 1-42 (367)
239 2v3a_A Rubredoxin reductase; a 98.1 1.7E-05 6E-10 76.9 12.5 97 43-189 145-244 (384)
240 4gcm_A TRXR, thioredoxin reduc 98.1 1.2E-05 4.3E-10 75.5 11.2 98 216-320 8-120 (312)
241 2eq6_A Pyruvate dehydrogenase 98.1 1.3E-05 4.3E-10 80.0 11.8 99 43-190 169-273 (464)
242 1c0p_A D-amino acid oxidase; a 98.1 2.6E-06 8.9E-11 82.1 6.5 38 40-77 3-40 (363)
243 2cdu_A NADPH oxidase; flavoenz 98.1 4.5E-06 1.5E-10 83.0 8.3 103 216-320 2-121 (452)
244 2gqw_A Ferredoxin reductase; f 98.1 5E-06 1.7E-10 81.4 8.4 100 214-320 7-117 (408)
245 2bi7_A UDP-galactopyranose mut 98.1 2E-06 7E-11 83.4 5.4 42 43-84 3-44 (384)
246 3s5w_A L-ornithine 5-monooxyge 98.1 1.1E-05 3.8E-10 80.4 11.0 103 216-319 32-195 (463)
247 3nks_A Protoporphyrinogen oxid 98.1 1.5E-06 5.3E-11 87.0 4.7 41 44-84 3-45 (477)
248 1k0i_A P-hydroxybenzoate hydro 98.1 1.6E-05 5.3E-10 77.5 11.6 103 215-319 3-166 (394)
249 1sez_A Protoporphyrinogen oxid 98.1 2E-06 6.7E-11 86.9 5.3 43 41-83 11-53 (504)
250 3p1w_A Rabgdi protein; GDI RAB 98.1 2.2E-06 7.6E-11 84.7 5.1 56 255-315 256-313 (475)
251 1nhp_A NADH peroxidase; oxidor 98.1 1.1E-05 3.7E-10 80.1 10.1 104 215-320 1-119 (447)
252 3lov_A Protoporphyrinogen oxid 98.1 2E-06 7E-11 86.1 4.8 42 43-84 4-47 (475)
253 2ivd_A PPO, PPOX, protoporphyr 98.1 1.9E-06 6.6E-11 86.3 4.6 43 42-84 15-57 (478)
254 1d5t_A Guanine nucleotide diss 98.1 3E-06 1E-10 83.7 5.8 58 255-317 234-291 (433)
255 2qa2_A CABE, polyketide oxygen 98.1 4.2E-05 1.4E-09 76.8 14.3 101 214-316 12-166 (499)
256 4dsg_A UDP-galactopyranose mut 98.1 3E-06 1E-10 84.9 5.8 43 42-84 8-51 (484)
257 3ihg_A RDME; flavoenzyme, anth 98.1 2.7E-05 9.3E-10 79.1 12.8 100 215-316 6-183 (535)
258 2qa1_A PGAE, polyketide oxygen 98.1 4.5E-05 1.5E-09 76.7 14.0 100 215-316 12-165 (500)
259 2iid_A L-amino-acid oxidase; f 98.0 3E-06 1E-10 85.4 5.3 45 39-83 29-73 (498)
260 1ebd_A E3BD, dihydrolipoamide 98.0 1.9E-05 6.4E-10 78.6 10.7 98 43-189 170-271 (455)
261 3i3l_A Alkylhalidase CMLS; fla 98.0 5E-05 1.7E-09 77.7 14.0 101 214-316 23-188 (591)
262 3fmw_A Oxygenase; mithramycin, 98.0 2.2E-05 7.5E-10 80.2 11.3 99 215-316 50-207 (570)
263 2bc0_A NADH oxidase; flavoprot 98.0 6.9E-06 2.4E-10 82.5 7.5 103 214-320 35-153 (490)
264 1v59_A Dihydrolipoamide dehydr 98.0 2.3E-05 7.7E-10 78.5 11.3 99 43-190 183-289 (478)
265 1y0p_A Fumarate reductase flav 98.0 4.3E-05 1.5E-09 78.3 13.5 101 215-316 127-317 (571)
266 3ces_A MNMG, tRNA uridine 5-ca 98.0 3.9E-05 1.3E-09 78.2 12.5 98 215-318 29-183 (651)
267 2r9z_A Glutathione amide reduc 98.0 3.6E-05 1.2E-09 76.7 12.0 98 43-190 166-266 (463)
268 1ges_A Glutathione reductase; 98.0 1.4E-05 4.8E-10 79.3 8.9 97 43-190 167-267 (450)
269 2xdo_A TETX2 protein; tetracyc 98.0 2.4E-05 8.2E-10 76.3 10.4 101 214-319 26-185 (398)
270 3ihm_A Styrene monooxygenase A 98.0 6.4E-06 2.2E-10 81.3 5.9 47 43-89 22-71 (430)
271 3qj4_A Renalase; FAD/NAD(P)-bi 98.0 2.3E-05 7.8E-10 74.8 9.6 95 215-314 2-163 (342)
272 2a8x_A Dihydrolipoyl dehydroge 98.0 3.2E-05 1.1E-09 77.1 11.0 98 43-189 171-272 (464)
273 3cp8_A TRNA uridine 5-carboxym 98.0 5.4E-05 1.9E-09 77.2 12.6 98 214-317 21-175 (641)
274 3g5s_A Methylenetetrahydrofola 98.0 8E-06 2.7E-10 77.5 6.0 49 43-91 1-55 (443)
275 1onf_A GR, grase, glutathione 98.0 3.8E-05 1.3E-09 77.3 11.4 97 43-190 176-277 (500)
276 4b1b_A TRXR, thioredoxin reduc 98.0 5E-05 1.7E-09 76.7 12.3 95 43-189 223-320 (542)
277 4g6h_A Rotenone-insensitive NA 98.0 1.2E-05 4.2E-10 80.7 7.8 105 215-320 43-173 (502)
278 1qo8_A Flavocytochrome C3 fuma 98.0 5.4E-05 1.9E-09 77.4 12.6 102 215-317 122-313 (566)
279 3jsk_A Cypbp37 protein; octame 98.0 6.3E-05 2.2E-09 70.8 12.0 163 215-378 80-332 (344)
280 2gjc_A Thiazole biosynthetic e 97.9 0.00017 5.7E-09 67.5 14.5 163 215-378 66-322 (326)
281 3cgb_A Pyridine nucleotide-dis 97.9 1.8E-05 6.3E-10 79.2 8.5 104 215-320 37-156 (480)
282 2zxi_A TRNA uridine 5-carboxym 97.9 7.5E-05 2.6E-09 75.9 12.9 98 215-318 28-182 (637)
283 1zmd_A Dihydrolipoyl dehydroge 97.9 3.7E-05 1.3E-09 76.8 10.6 100 43-190 178-284 (474)
284 3ic9_A Dihydrolipoamide dehydr 97.9 9E-05 3.1E-09 74.3 13.4 97 43-189 174-275 (492)
285 1w4x_A Phenylacetone monooxyge 97.9 6.1E-05 2.1E-09 76.6 12.1 99 215-318 17-158 (542)
286 1d4d_A Flavocytochrome C fumar 97.9 9.7E-05 3.3E-09 75.5 13.5 103 214-317 126-318 (572)
287 2qae_A Lipoamide, dihydrolipoy 97.9 4.1E-05 1.4E-09 76.4 10.5 98 43-189 174-277 (468)
288 1fec_A Trypanothione reductase 97.9 5.2E-05 1.8E-09 76.0 10.8 97 43-190 187-290 (490)
289 1mo9_A ORF3; nucleotide bindin 97.9 4.3E-05 1.5E-09 77.3 10.2 96 44-190 215-318 (523)
290 2wpf_A Trypanothione reductase 97.9 5.3E-05 1.8E-09 76.1 10.8 97 43-190 191-294 (495)
291 2hqm_A GR, grase, glutathione 97.9 5.3E-05 1.8E-09 75.8 10.6 98 43-190 185-287 (479)
292 4hb9_A Similarities with proba 97.9 7.5E-05 2.5E-09 72.9 11.2 96 216-316 3-166 (412)
293 2vdc_G Glutamate synthase [NAD 97.8 1.1E-05 3.6E-10 80.1 5.0 89 213-315 121-218 (456)
294 1b37_A Protein (polyamine oxid 97.8 1E-05 3.5E-10 80.9 4.9 43 42-84 3-46 (472)
295 3l8k_A Dihydrolipoyl dehydroge 97.8 6.5E-05 2.2E-09 74.8 10.6 98 215-320 5-148 (466)
296 3dgz_A Thioredoxin reductase 2 97.8 0.0001 3.5E-09 73.9 11.7 97 43-189 185-288 (488)
297 1ojt_A Surface protein; redox- 97.8 0.00016 5.4E-09 72.4 13.0 102 215-319 7-163 (482)
298 3urh_A Dihydrolipoyl dehydroge 97.8 9.4E-05 3.2E-09 74.2 11.3 99 43-190 198-302 (491)
299 2z3y_A Lysine-specific histone 97.8 1.8E-05 6E-10 82.5 5.8 43 41-83 105-147 (662)
300 1xdi_A RV3303C-LPDA; reductase 97.8 5.7E-05 2E-09 76.0 9.4 97 43-190 182-281 (499)
301 1zk7_A HGII, reductase, mercur 97.8 0.00014 4.8E-09 72.5 12.1 101 214-320 4-154 (467)
302 1dxl_A Dihydrolipoamide dehydr 97.8 8.6E-05 2.9E-09 74.1 10.5 99 215-319 7-154 (470)
303 2r0c_A REBC; flavin adenine di 97.8 0.00029 9.8E-09 71.7 14.4 99 215-316 27-196 (549)
304 1y56_A Hypothetical protein PH 97.8 3E-05 1E-09 77.8 6.8 103 214-320 108-223 (493)
305 3c4a_A Probable tryptophan hyd 97.8 2.2E-05 7.5E-10 76.1 5.4 35 44-78 1-37 (381)
306 2gmh_A Electron transfer flavo 97.7 0.00022 7.5E-09 73.1 13.0 103 215-317 36-218 (584)
307 2xag_A Lysine-specific histone 97.7 2.7E-05 9.1E-10 82.7 6.3 42 41-82 276-317 (852)
308 1m6i_A Programmed cell death p 97.7 2E-05 6.8E-10 79.2 4.9 97 215-318 12-146 (493)
309 3lad_A Dihydrolipoamide dehydr 97.7 0.0002 7E-09 71.5 12.3 99 43-190 180-282 (476)
310 3g3e_A D-amino-acid oxidase; F 97.7 1.6E-05 5.5E-10 76.1 3.7 34 44-77 1-40 (351)
311 1cjc_A Protein (adrenodoxin re 97.7 2E-05 6.9E-10 78.3 4.3 90 213-316 5-106 (460)
312 3dk9_A Grase, GR, glutathione 97.7 0.00022 7.5E-09 71.3 11.9 99 43-190 187-295 (478)
313 4dna_A Probable glutathione re 97.7 0.00047 1.6E-08 68.5 13.7 95 43-189 170-269 (463)
314 3o0h_A Glutathione reductase; 97.6 0.0002 7E-09 71.6 10.7 96 43-189 191-289 (484)
315 3c4n_A Uncharacterized protein 97.6 7.5E-05 2.6E-09 72.9 7.3 33 215-247 37-71 (405)
316 3dgh_A TRXR-1, thioredoxin red 97.6 0.00026 8.9E-09 70.8 11.2 97 43-189 187-290 (483)
317 3qfa_A Thioredoxin reductase 1 97.6 0.00039 1.3E-08 70.1 12.1 97 43-189 210-316 (519)
318 1lqt_A FPRA; NADP+ derivative, 97.6 3E-05 1E-09 76.9 3.6 91 214-318 3-111 (456)
319 2dkh_A 3-hydroxybenzoate hydro 97.6 0.00043 1.5E-08 71.7 12.3 102 215-316 33-211 (639)
320 2x8g_A Thioredoxin glutathione 97.6 0.00057 2E-08 70.3 12.8 33 43-75 286-318 (598)
321 1pn0_A Phenol 2-monooxygenase; 97.5 0.00071 2.4E-08 70.3 13.2 34 215-248 9-47 (665)
322 4at0_A 3-ketosteroid-delta4-5a 97.5 0.00076 2.6E-08 67.9 12.9 59 256-316 203-264 (510)
323 1ps9_A 2,4-dienoyl-COA reducta 97.5 7.3E-05 2.5E-09 78.1 5.4 87 214-320 373-471 (671)
324 2gag_A Heterotetrameric sarcos 97.5 0.00041 1.4E-08 75.3 11.2 106 214-319 128-256 (965)
325 1gte_A Dihydropyrimidine dehyd 97.5 4E-05 1.4E-09 83.8 3.3 93 214-318 187-290 (1025)
326 3k30_A Histamine dehydrogenase 97.5 0.00068 2.3E-08 71.0 12.5 99 43-189 523-625 (690)
327 1pn0_A Phenol 2-monooxygenase; 97.4 8.3E-05 2.8E-09 77.3 5.0 36 43-78 8-48 (665)
328 2aqj_A Tryptophan halogenase, 97.4 0.0013 4.6E-08 66.6 13.4 53 260-318 170-224 (538)
329 2e5v_A L-aspartate oxidase; ar 97.4 0.00089 3E-08 66.6 11.5 99 216-319 1-179 (472)
330 3t37_A Probable dehydrogenase; 97.4 8.8E-05 3E-09 75.1 4.1 38 40-77 14-52 (526)
331 3nrn_A Uncharacterized protein 97.4 0.0013 4.5E-08 64.4 12.4 47 263-316 197-243 (421)
332 1kf6_A Fumarate reductase flav 97.3 0.0017 5.8E-08 66.6 12.8 99 216-314 7-195 (602)
333 1kdg_A CDH, cellobiose dehydro 97.3 0.00017 5.9E-09 73.3 5.1 36 42-77 6-41 (546)
334 4b63_A L-ornithine N5 monooxyg 97.2 0.0019 6.6E-08 64.7 12.0 105 216-320 41-218 (501)
335 3ayj_A Pro-enzyme of L-phenyla 97.2 0.00011 3.7E-09 76.0 2.6 36 43-78 56-100 (721)
336 1vg0_A RAB proteins geranylger 97.2 0.00035 1.2E-08 71.3 5.9 44 41-84 6-49 (650)
337 1ju2_A HydroxynitrIle lyase; f 97.2 0.00014 4.8E-09 73.6 2.8 35 42-77 25-59 (536)
338 3q9t_A Choline dehydrogenase a 97.1 0.00028 9.4E-09 71.9 4.4 36 42-77 5-41 (577)
339 2weu_A Tryptophan 5-halogenase 97.1 0.0044 1.5E-07 62.3 12.7 52 261-318 179-232 (511)
340 4gde_A UDP-galactopyranose mut 97.1 0.00088 3E-08 67.4 7.5 35 215-249 11-46 (513)
341 1n4w_A CHOD, cholesterol oxida 97.0 0.0005 1.7E-08 69.1 5.2 38 42-79 4-41 (504)
342 1o94_A Tmadh, trimethylamine d 97.0 0.0017 5.9E-08 68.3 9.4 34 43-76 528-563 (729)
343 2h88_A Succinate dehydrogenase 97.0 0.0069 2.3E-07 62.2 13.1 52 265-316 165-217 (621)
344 3c4a_A Probable tryptophan hyd 97.0 0.00044 1.5E-08 66.9 4.0 86 216-317 2-144 (381)
345 2pyx_A Tryptophan halogenase; 96.9 0.0086 3E-07 60.4 13.5 51 262-318 182-235 (526)
346 3qvp_A Glucose oxidase; oxidor 96.9 0.00048 1.6E-08 70.1 4.1 35 42-76 18-53 (583)
347 1coy_A Cholesterol oxidase; ox 96.9 0.00067 2.3E-08 68.2 5.2 37 41-77 9-45 (507)
348 1chu_A Protein (L-aspartate ox 96.8 0.0039 1.3E-07 63.1 10.0 33 215-248 9-41 (540)
349 3fim_B ARYL-alcohol oxidase; A 96.8 0.00059 2E-08 69.3 3.1 36 43-78 2-38 (566)
350 2bs2_A Quinol-fumarate reducta 96.7 0.015 5.3E-07 60.0 13.7 52 263-314 166-218 (660)
351 1gpe_A Protein (glucose oxidas 96.7 0.0011 3.7E-08 67.9 5.0 37 41-77 22-59 (587)
352 2jbv_A Choline oxidase; alcoho 96.7 0.0011 3.8E-08 67.2 4.4 37 42-78 12-49 (546)
353 3i6d_A Protoporphyrinogen oxid 96.7 0.0068 2.3E-07 60.0 10.1 40 270-314 248-287 (470)
354 3kkj_A Amine oxidase, flavin-c 96.2 0.0034 1.2E-07 56.9 4.7 34 216-249 4-37 (336)
355 2g1u_A Hypothetical protein TM 96.1 0.0072 2.5E-07 49.9 5.4 36 40-75 16-51 (155)
356 3gyx_A Adenylylsulfate reducta 96.0 0.018 6.2E-07 59.5 9.3 33 215-247 23-61 (662)
357 3fwz_A Inner membrane protein 95.8 0.016 5.4E-07 46.9 6.0 33 43-75 7-39 (140)
358 4dgk_A Phytoene dehydrogenase; 95.7 0.0075 2.6E-07 60.4 4.4 35 215-249 2-36 (501)
359 1lss_A TRK system potassium up 95.5 0.017 5.7E-07 46.4 5.1 31 44-74 5-35 (140)
360 3llv_A Exopolyphosphatase-rela 95.3 0.021 7E-07 46.2 5.3 33 43-75 6-38 (141)
361 1id1_A Putative potassium chan 95.3 0.022 7.7E-07 46.7 5.5 33 43-75 3-35 (153)
362 3ic5_A Putative saccharopine d 95.3 0.02 6.9E-07 44.3 4.9 32 43-74 5-37 (118)
363 3oz2_A Digeranylgeranylglycero 95.0 0.019 6.7E-07 55.1 4.8 34 216-249 6-39 (397)
364 3ihm_A Styrene monooxygenase A 94.7 0.026 8.8E-07 55.3 4.9 35 213-247 21-55 (430)
365 4dio_A NAD(P) transhydrogenase 94.3 0.093 3.2E-06 50.2 7.4 33 43-75 190-222 (405)
366 2hmt_A YUAA protein; RCK, KTN, 94.1 0.051 1.7E-06 43.7 4.7 31 44-74 7-37 (144)
367 3nix_A Flavoprotein/dehydrogen 94.1 0.031 1.1E-06 54.3 3.9 33 215-247 6-38 (421)
368 3dfz_A SIRC, precorrin-2 dehyd 94.1 0.047 1.6E-06 47.8 4.5 34 42-75 30-63 (223)
369 2iid_A L-amino-acid oxidase; f 94.0 0.043 1.5E-06 54.8 4.9 38 213-250 32-69 (498)
370 3lk7_A UDP-N-acetylmuramoylala 94.0 0.023 7.8E-07 56.0 2.7 80 213-320 8-88 (451)
371 3ka7_A Oxidoreductase; structu 94.0 0.047 1.6E-06 53.1 5.0 34 216-249 2-35 (425)
372 3rp8_A Flavoprotein monooxygen 94.0 0.049 1.7E-06 52.7 5.1 36 214-249 23-58 (407)
373 3c85_A Putative glutathione-re 93.9 0.061 2.1E-06 45.6 5.0 33 43-75 39-72 (183)
374 3eag_A UDP-N-acetylmuramate:L- 93.9 0.039 1.3E-06 51.8 3.9 77 214-320 4-82 (326)
375 4e12_A Diketoreductase; oxidor 93.8 0.07 2.4E-06 48.8 5.5 34 42-75 3-36 (283)
376 3k7m_X 6-hydroxy-L-nicotine ox 93.7 0.057 2E-06 52.7 4.9 34 216-249 3-36 (431)
377 3dme_A Conserved exported prot 93.7 0.058 2E-06 51.2 4.8 34 215-248 5-38 (369)
378 2e1m_A L-glutamate oxidase; L- 93.6 0.066 2.3E-06 51.1 5.1 36 214-249 44-80 (376)
379 3l4b_C TRKA K+ channel protien 93.6 0.059 2E-06 47.1 4.4 31 45-75 2-32 (218)
380 3p2y_A Alanine dehydrogenase/p 93.6 0.12 4.1E-06 49.0 6.7 33 43-75 184-216 (381)
381 3nks_A Protoporphyrinogen oxid 93.5 0.057 1.9E-06 53.5 4.7 35 215-249 3-39 (477)
382 1kyq_A Met8P, siroheme biosynt 93.5 0.046 1.6E-06 49.4 3.6 34 42-75 12-45 (274)
383 3v76_A Flavoprotein; structura 93.5 0.06 2E-06 52.4 4.7 36 214-249 27-62 (417)
384 2oln_A NIKD protein; flavoprot 93.5 0.068 2.3E-06 51.5 5.0 35 215-249 5-39 (397)
385 3c96_A Flavin-containing monoo 93.4 0.073 2.5E-06 51.6 5.2 35 215-249 5-40 (410)
386 3cgv_A Geranylgeranyl reductas 93.4 0.067 2.3E-06 51.4 4.8 34 216-249 6-39 (397)
387 2b9w_A Putative aminooxidase; 93.3 0.07 2.4E-06 51.9 4.9 36 214-249 6-42 (424)
388 3g5s_A Methylenetetrahydrofola 93.3 0.072 2.5E-06 50.7 4.6 33 215-247 2-34 (443)
389 1ryi_A Glycine oxidase; flavop 93.3 0.068 2.3E-06 51.1 4.6 33 215-247 18-50 (382)
390 2uzz_A N-methyl-L-tryptophan o 93.3 0.058 2E-06 51.4 4.1 34 215-248 3-36 (372)
391 3lk7_A UDP-N-acetylmuramoylala 93.3 0.097 3.3E-06 51.5 5.8 34 42-75 8-41 (451)
392 1f0y_A HCDH, L-3-hydroxyacyl-C 93.2 0.1 3.6E-06 48.2 5.6 33 43-75 15-47 (302)
393 3fwz_A Inner membrane protein 93.2 0.34 1.2E-05 38.8 8.0 35 213-247 6-40 (140)
394 2g1u_A Hypothetical protein TM 93.1 0.11 3.8E-06 42.6 5.1 35 213-247 18-52 (155)
395 1rsg_A FMS1 protein; FAD bindi 93.1 0.078 2.7E-06 53.2 4.9 35 215-249 9-44 (516)
396 2jae_A L-amino acid oxidase; o 93.1 0.085 2.9E-06 52.4 5.1 36 214-249 11-46 (489)
397 2gf3_A MSOX, monomeric sarcosi 93.1 0.076 2.6E-06 50.9 4.6 34 215-248 4-37 (389)
398 1pzg_A LDH, lactate dehydrogen 93.0 0.11 3.7E-06 48.7 5.4 33 43-75 9-42 (331)
399 1c0p_A D-amino acid oxidase; a 93.0 0.089 3E-06 50.0 4.9 33 215-247 7-39 (363)
400 1s3e_A Amine oxidase [flavin-c 93.0 0.081 2.8E-06 53.1 4.8 35 215-249 5-39 (520)
401 2bcg_G Secretory pathway GDP d 93.0 0.079 2.7E-06 52.2 4.6 36 215-250 12-47 (453)
402 2a9f_A Putative malic enzyme ( 92.9 0.091 3.1E-06 49.8 4.6 35 42-76 187-222 (398)
403 1y56_B Sarcosine oxidase; dehy 92.8 0.081 2.8E-06 50.6 4.4 33 215-247 6-38 (382)
404 1bg6_A N-(1-D-carboxylethyl)-L 92.8 0.1 3.6E-06 49.4 5.1 32 43-74 4-35 (359)
405 1t2d_A LDH-P, L-lactate dehydr 92.7 0.14 4.6E-06 47.8 5.6 34 42-75 3-37 (322)
406 3dfz_A SIRC, precorrin-2 dehyd 92.7 0.13 4.6E-06 44.9 5.1 75 213-317 30-104 (223)
407 2x5o_A UDP-N-acetylmuramoylala 92.6 0.077 2.6E-06 52.0 3.9 34 43-76 5-38 (439)
408 3k96_A Glycerol-3-phosphate de 92.6 0.12 4.1E-06 49.0 5.1 35 41-75 27-61 (356)
409 2bi7_A UDP-galactopyranose mut 92.5 0.11 3.8E-06 49.8 4.9 35 215-249 4-38 (384)
410 3nyc_A D-arginine dehydrogenas 92.5 0.084 2.9E-06 50.3 4.0 35 214-249 9-43 (381)
411 2ivd_A PPO, PPOX, protoporphyr 92.4 0.1 3.4E-06 51.7 4.7 36 214-249 16-51 (478)
412 3tl2_A Malate dehydrogenase; c 92.3 0.16 5.6E-06 47.0 5.6 36 39-74 4-40 (315)
413 3ghy_A Ketopantoate reductase 92.3 0.14 4.6E-06 48.2 5.2 32 43-74 3-34 (335)
414 3fpz_A Thiazole biosynthetic e 92.3 0.1 3.5E-06 48.8 4.3 65 214-278 65-139 (326)
415 2e4g_A Tryptophan halogenase; 92.3 0.095 3.3E-06 53.0 4.3 34 214-247 25-61 (550)
416 2yg5_A Putrescine oxidase; oxi 92.3 0.12 4E-06 50.8 4.8 35 215-249 6-40 (453)
417 2vvm_A Monoamine oxidase N; FA 92.2 0.23 7.9E-06 49.3 7.1 40 44-83 40-79 (495)
418 1vl6_A Malate oxidoreductase; 92.2 0.13 4.3E-06 48.7 4.7 34 42-75 191-225 (388)
419 3hdq_A UDP-galactopyranose mut 92.2 0.13 4.4E-06 49.5 4.8 36 214-249 29-64 (397)
420 1y6j_A L-lactate dehydrogenase 92.2 0.15 5.2E-06 47.4 5.2 34 42-75 6-41 (318)
421 4ffl_A PYLC; amino acid, biosy 92.2 0.16 5.5E-06 48.3 5.5 34 43-76 1-34 (363)
422 2gag_B Heterotetrameric sarcos 92.1 0.11 3.7E-06 50.1 4.3 33 215-247 22-56 (405)
423 4g65_A TRK system potassium up 92.1 0.073 2.5E-06 52.4 3.1 34 43-76 3-36 (461)
424 3dje_A Fructosyl amine: oxygen 92.1 0.14 4.7E-06 50.1 5.1 35 215-249 7-42 (438)
425 1jnr_A Adenylylsulfate reducta 92.1 0.1 3.4E-06 53.9 4.2 35 43-77 22-60 (643)
426 2ewd_A Lactate dehydrogenase,; 92.1 0.15 5E-06 47.5 5.0 33 43-75 4-37 (317)
427 1sez_A Protoporphyrinogen oxid 91.9 0.13 4.5E-06 51.3 4.8 36 214-249 13-48 (504)
428 1v0j_A UDP-galactopyranose mut 91.9 0.12 4.2E-06 49.8 4.4 35 215-249 8-43 (399)
429 3g3e_A D-amino-acid oxidase; F 91.8 0.12 4E-06 48.9 4.1 32 216-247 2-39 (351)
430 3i83_A 2-dehydropantoate 2-red 91.7 0.17 5.9E-06 47.1 5.1 31 44-74 3-33 (320)
431 3doj_A AT3G25530, dehydrogenas 91.7 0.2 6.7E-06 46.5 5.4 35 41-75 19-53 (310)
432 1x13_A NAD(P) transhydrogenase 91.6 0.18 6.3E-06 48.5 5.3 33 43-75 172-204 (401)
433 3pvc_A TRNA 5-methylaminomethy 91.6 0.15 5.2E-06 53.1 5.0 36 214-249 264-299 (689)
434 2ew2_A 2-dehydropantoate 2-red 91.6 0.18 6E-06 46.8 5.0 31 44-74 4-34 (316)
435 1l7d_A Nicotinamide nucleotide 91.6 0.2 7E-06 48.0 5.5 33 43-75 172-204 (384)
436 3ps9_A TRNA 5-methylaminomethy 91.5 0.16 5.4E-06 52.9 5.0 35 215-249 273-307 (676)
437 3e1t_A Halogenase; flavoprotei 91.5 0.14 4.7E-06 51.3 4.4 33 215-247 8-40 (512)
438 2raf_A Putative dinucleotide-b 91.5 0.22 7.6E-06 43.1 5.3 34 43-76 19-52 (209)
439 4e21_A 6-phosphogluconate dehy 91.5 0.19 6.5E-06 47.6 5.1 37 38-74 17-53 (358)
440 3lov_A Protoporphyrinogen oxid 91.5 0.15 5.2E-06 50.3 4.7 35 215-249 5-41 (475)
441 1i8t_A UDP-galactopyranose mut 91.3 0.15 5.2E-06 48.5 4.4 34 216-249 3-36 (367)
442 2qcu_A Aerobic glycerol-3-phos 91.3 0.15 5.1E-06 50.9 4.4 33 215-247 4-36 (501)
443 3vtf_A UDP-glucose 6-dehydroge 91.2 0.22 7.6E-06 48.3 5.3 37 39-75 17-53 (444)
444 1lld_A L-lactate dehydrogenase 91.2 0.21 7.3E-06 46.4 5.1 31 44-74 8-40 (319)
445 1id1_A Putative potassium chan 91.2 0.27 9.2E-06 40.1 5.2 33 214-246 3-35 (153)
446 3eag_A UDP-N-acetylmuramate:L- 91.2 0.25 8.4E-06 46.2 5.5 33 43-75 4-37 (326)
447 1ks9_A KPA reductase;, 2-dehyd 91.1 0.23 8E-06 45.3 5.3 32 45-76 2-33 (291)
448 3gvi_A Malate dehydrogenase; N 91.1 0.25 8.7E-06 45.9 5.5 34 42-75 6-40 (324)
449 3hn2_A 2-dehydropantoate 2-red 91.1 0.19 6.6E-06 46.6 4.7 31 44-74 3-33 (312)
450 3qha_A Putative oxidoreductase 91.1 0.18 6.3E-06 46.3 4.5 35 42-76 14-48 (296)
451 1jw9_B Molybdopterin biosynthe 91.0 0.18 6.3E-06 45.0 4.3 32 44-75 32-64 (249)
452 2uyy_A N-PAC protein; long-cha 90.9 0.28 9.6E-06 45.5 5.7 35 41-75 28-62 (316)
453 3e8x_A Putative NAD-dependent 90.9 0.25 8.5E-06 43.5 5.1 34 42-75 20-54 (236)
454 3ado_A Lambda-crystallin; L-gu 90.9 0.22 7.5E-06 46.2 4.8 32 44-75 7-38 (319)
455 3g79_A NDP-N-acetyl-D-galactos 90.9 0.21 7E-06 49.2 4.8 35 43-77 18-54 (478)
456 1pjc_A Protein (L-alanine dehy 90.9 0.23 7.7E-06 47.2 5.0 31 44-74 168-198 (361)
457 3llv_A Exopolyphosphatase-rela 90.8 0.21 7.2E-06 40.0 4.1 33 214-246 6-38 (141)
458 2rgh_A Alpha-glycerophosphate 90.7 0.18 6.2E-06 51.2 4.4 34 214-247 32-65 (571)
459 3g0o_A 3-hydroxyisobutyrate de 90.6 0.27 9.1E-06 45.4 5.1 33 43-75 7-39 (303)
460 2z3y_A Lysine-specific histone 90.5 0.26 8.8E-06 51.0 5.4 36 213-248 106-141 (662)
461 2y0c_A BCEC, UDP-glucose dehyd 90.5 0.26 8.8E-06 48.7 5.1 33 43-75 8-40 (478)
462 2hjr_A Malate dehydrogenase; m 90.4 0.32 1.1E-05 45.4 5.5 32 44-75 15-47 (328)
463 3oj0_A Glutr, glutamyl-tRNA re 90.4 0.12 4.3E-06 41.6 2.4 32 43-74 21-52 (144)
464 2dpo_A L-gulonate 3-dehydrogen 90.3 0.27 9.2E-06 45.7 4.9 33 43-75 6-38 (319)
465 3p1w_A Rabgdi protein; GDI RAB 90.3 0.43 1.5E-05 46.9 6.6 46 40-85 17-62 (475)
466 3axb_A Putative oxidoreductase 90.3 0.18 6.2E-06 49.4 3.9 31 215-245 24-55 (448)
467 3l9w_A Glutathione-regulated p 90.3 0.3 1E-05 47.2 5.3 33 43-75 4-36 (413)
468 1d5t_A Guanine nucleotide diss 90.2 0.29 1E-05 47.7 5.3 46 40-85 3-48 (433)
469 2xag_A Lysine-specific histone 90.2 0.27 9.3E-06 52.2 5.3 36 214-249 278-313 (852)
470 3phh_A Shikimate dehydrogenase 90.2 0.36 1.2E-05 43.5 5.4 33 43-75 118-150 (269)
471 2v6b_A L-LDH, L-lactate dehydr 90.0 0.31 1E-05 45.0 5.0 31 45-75 2-34 (304)
472 3da1_A Glycerol-3-phosphate de 90.0 0.25 8.4E-06 50.1 4.7 34 214-247 18-51 (561)
473 4dsg_A UDP-galactopyranose mut 90.0 0.29 9.8E-06 48.6 5.1 36 214-249 9-45 (484)
474 3pqe_A L-LDH, L-lactate dehydr 90.0 0.28 9.7E-06 45.6 4.7 33 42-74 4-38 (326)
475 3ic5_A Putative saccharopine d 90.0 0.3 1E-05 37.4 4.2 33 214-246 5-38 (118)
476 1lss_A TRK system potassium up 90.0 0.37 1.3E-05 38.2 4.9 32 215-246 5-36 (140)
477 2qyt_A 2-dehydropantoate 2-red 89.9 0.19 6.7E-06 46.5 3.6 32 43-74 8-45 (317)
478 1kyq_A Met8P, siroheme biosynt 89.9 0.27 9.2E-06 44.4 4.3 35 213-247 12-46 (274)
479 3l6d_A Putative oxidoreductase 89.8 0.45 1.5E-05 44.0 6.0 34 42-75 8-41 (306)
480 3k5i_A Phosphoribosyl-aminoimi 89.8 0.29 9.9E-06 47.3 4.8 37 37-73 18-54 (403)
481 3gpi_A NAD-dependent epimerase 89.8 0.41 1.4E-05 43.5 5.7 34 43-76 3-36 (286)
482 1pjq_A CYSG, siroheme synthase 89.7 0.29 9.9E-06 48.1 4.8 33 43-75 12-44 (457)
483 3q2o_A Phosphoribosylaminoimid 89.7 0.5 1.7E-05 45.3 6.4 35 42-76 13-47 (389)
484 2eez_A Alanine dehydrogenase; 89.7 0.38 1.3E-05 45.8 5.4 32 43-74 166-197 (369)
485 4huj_A Uncharacterized protein 89.7 0.17 5.7E-06 44.3 2.7 33 42-74 22-55 (220)
486 1nyt_A Shikimate 5-dehydrogena 89.6 0.39 1.3E-05 43.5 5.2 32 43-74 119-150 (271)
487 3gg2_A Sugar dehydrogenase, UD 89.5 0.33 1.1E-05 47.5 5.0 32 44-75 3-34 (450)
488 3p7m_A Malate dehydrogenase; p 89.5 0.43 1.5E-05 44.3 5.5 33 43-75 5-38 (321)
489 2vns_A Metalloreductase steap3 89.4 0.42 1.4E-05 41.5 5.2 31 44-74 29-59 (215)
490 3g17_A Similar to 2-dehydropan 89.4 0.25 8.7E-06 45.3 3.9 32 44-75 3-34 (294)
491 3cky_A 2-hydroxymethyl glutara 89.4 0.36 1.2E-05 44.3 5.0 32 43-74 4-35 (301)
492 3k6j_A Protein F01G10.3, confi 89.4 0.66 2.2E-05 45.3 6.9 34 42-75 53-86 (460)
493 2vhw_A Alanine dehydrogenase; 89.4 0.41 1.4E-05 45.7 5.4 32 43-74 168-199 (377)
494 2q3e_A UDP-glucose 6-dehydroge 89.1 0.32 1.1E-05 48.0 4.6 33 43-75 5-39 (467)
495 3dhn_A NAD-dependent epimerase 89.1 0.32 1.1E-05 42.4 4.2 33 43-75 4-37 (227)
496 3pid_A UDP-glucose 6-dehydroge 89.1 0.36 1.2E-05 46.8 4.8 34 41-75 34-67 (432)
497 3mog_A Probable 3-hydroxybutyr 88.9 0.42 1.4E-05 47.2 5.3 33 43-75 5-37 (483)
498 1zcj_A Peroxisomal bifunctiona 88.8 0.45 1.5E-05 46.8 5.4 33 43-75 37-69 (463)
499 2hmt_A YUAA protein; RCK, KTN, 88.8 0.41 1.4E-05 38.1 4.4 33 214-246 6-38 (144)
500 4a7p_A UDP-glucose dehydrogena 88.8 0.45 1.6E-05 46.4 5.3 34 43-76 8-41 (446)
No 1
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=100.00 E-value=2.8e-71 Score=562.68 Aligned_cols=437 Identities=56% Similarity=0.922 Sum_probs=399.6
Q ss_pred CCCCCCCCcEEEECCChHHHHHHHHHHHCCCeEEEEecCCCCCceeeccCccCchhhhhhhHHHHHHHhhhhhCCccccc
Q 011787 37 FASASDENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSS 116 (477)
Q Consensus 37 ~~~~~~~~dvvIIGgG~AGl~aA~~l~~~g~~V~lie~~~~~GG~~~~~~~~p~~~l~~~~~~~~~~~~~~~~~g~~~~~ 116 (477)
+.+++.++||+||||||||++||..|++.|++|+|||+++.+||+|.+.+|+|++.++.....+......+..+++....
T Consensus 19 ~~~~m~~~dVvVIGgG~aGl~aA~~la~~G~~V~liEk~~~~GG~~~~~gciP~k~l~~~~~~~~~~~~~~~~~g~~~~~ 98 (491)
T 3urh_A 19 YFQSMMAYDLIVIGSGPGGYVCAIKAAQLGMKVAVVEKRSTYGGTCLNVGCIPSKALLHASEMFHQAQHGLEALGVEVAN 98 (491)
T ss_dssp -------CCEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHSSGGGTEECCC
T ss_pred chhhcccCCEEEECCCHHHHHHHHHHHHCCCeEEEEecCCCCCCccccccchhhHHHHHHHHHHHHHHhhHhhcCcccCC
Confidence 44455679999999999999999999999999999999899999999999999999998888888777767788888777
Q ss_pred cccChHHHHHHHHHHHHHHHHHHHHHhhhCCeEEEEeEEEEecCCEEEEEecCCceEEEEecEEEEccCCCCCCCCCCc-
Q 011787 117 VEVDLPAMMAQKDKAVSNLTRGIEGLFKKNKVTYVKGYGKFISPSEVSVDTIEGGNTVVKGKNIIIATGSDVKSLPGIT- 195 (477)
Q Consensus 117 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~v~~~~g~~~~i~~d~lvlAtG~~~~~~~g~~- 195 (477)
..++|..+..+.......+...+...+++.+++++.+.+.+++++.+.|.+.+|...++.||+||||||++|+.+|++.
T Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~~~~~~~~~~v~~~~g~~~~~~~d~lViATGs~p~~ipg~~~ 178 (491)
T 3urh_A 99 PKLNLQKMMAHKDATVKSNVDGVSFLFKKNKIDGFQGTGKVLGQGKVSVTNEKGEEQVLEAKNVVIATGSDVAGIPGVEV 178 (491)
T ss_dssp CEECHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEESEEEECSSSEEEEECTTSCEEEEECSEEEECCCEECCCBTTBCC
T ss_pred CccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEEEecCCEEEEEeCCCceEEEEeCEEEEccCCCCCCCCCccc
Confidence 7899999999999999888888888899999999999999999999999988876678999999999999998888876
Q ss_pred -cCCceEecchhhhcccCCCCeeEEEcccHHHHHHHHHHHHcCCcEEEEEeCCCcCCCCCHHHHHHHHHHHHhcCcEEEe
Q 011787 196 -IDEKRIVSSTGALALNEVPKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIVPSMDGEIRKQFQRSLEKQKMKFML 274 (477)
Q Consensus 196 -~~~~~~~~~~~~~~~~~~~~~v~IiG~G~~g~e~a~~l~~~g~~Vtli~~~~~~~~~~~~~~~~~~~~~l~~~gv~~~~ 274 (477)
.+...++++.+...+...+++++|||+|++|+|+|..|++.|.+|+++++.+++++.+++++.+.+.+.+++.||++++
T Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~~d~~~~~~l~~~l~~~gV~v~~ 258 (491)
T 3urh_A 179 AFDEKTIVSSTGALALEKVPASMIVVGGGVIGLELGSVWARLGAKVTVVEFLDTILGGMDGEVAKQLQRMLTKQGIDFKL 258 (491)
T ss_dssp CCCSSSEECHHHHTSCSSCCSEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSSSSSSCHHHHHHHHHHHHHTTCEEEC
T ss_pred ccCCeeEEehhHhhhhhhcCCeEEEECCCHHHHHHHHHHHHcCCEEEEEeccccccccCCHHHHHHHHHHHHhCCCEEEE
Confidence 4567789999998888899999999999999999999999999999999999999999999999999999999999999
Q ss_pred CceEEEEEEcCCeEEEEEeecCCCceEEEEcCEEEEeecCCCCCCCCCccccceeecCCCCeecCCCCCCCCCCeEEecc
Q 011787 275 KTKVVGVDLSGDGVKLTLEPAAGGEKTILEADVVLVSAGRTPFTAGLGLDKIGVETDKMGRIPVNERFATNIPGVYAIGD 354 (477)
Q Consensus 275 ~~~v~~i~~~~~~~~v~~~~~~~~~~~~i~~D~vi~a~G~~p~~~~l~~~~~gl~~~~~g~i~vd~~l~t~~~~vya~GD 354 (477)
++++.+++.+++++.+.+.+..+++.+++++|.|++|+|++|+++.+.++..|+.++++|+|.||+++||++|+|||+||
T Consensus 259 ~~~v~~i~~~~~~~~v~~~~~~~g~~~~i~~D~Vi~a~G~~p~~~~l~l~~~g~~~~~~G~i~vd~~~~t~~~~IyA~GD 338 (491)
T 3urh_A 259 GAKVTGAVKSGDGAKVTFEPVKGGEATTLDAEVVLIATGRKPSTDGLGLAKAGVVLDSRGRVEIDRHFQTSIAGVYAIGD 338 (491)
T ss_dssp SEEEEEEEEETTEEEEEEEETTSCCCEEEEESEEEECCCCEECCTTSCHHHHTCCBCTTSCBCCCTTCBCSSTTEEECGG
T ss_pred CCeEEEEEEeCCEEEEEEEecCCCceEEEEcCEEEEeeCCccCCCccCchhcCceECCCCCEeECCCCCCCCCCEEEEEe
Confidence 99999999888888887765333445789999999999999999987778889999999999999999999999999999
Q ss_pred cCCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCCceEEEcCCCeeeecCCHHHHHHcCCCEEEEEEecCccccchhcCCC
Q 011787 355 VIPGPMLAHKAEEDGVACVEFLAGKHGHVDYDKVPGVVYTHPEVASVGKTEEQVKELGVEYRVGKFPFLANSRAKAIDDA 434 (477)
Q Consensus 355 ~~~~~~~~~~A~~~g~~aa~~i~~~~~~~~~~~~p~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 434 (477)
|++.|.+++.|..||++||+||++...++++..+|+++|++|+++++|+||+||++.|+++.++.+++....++.+.+++
T Consensus 339 ~~~~~~~~~~A~~~g~~aa~~i~g~~~~~~~~~~p~~~~~~p~~a~vGlte~~a~~~g~~~~~~~~~~~~~~~~~~~~~~ 418 (491)
T 3urh_A 339 VVRGPMLAHKAEDEGVAVAEIIAGQAGHVNYDVIPGVVYTQPEVASVGKTEEELKAAGVAYKIGKFPFTANGRARAMLQT 418 (491)
T ss_dssp GSSSCCCHHHHHHHHHHHHHHHTTSCCCCCTTCCCEEECSSSCEEEEECCHHHHHHTTCCEEEEEEEGGGCHHHHHTTCC
T ss_pred cCCCccchhHHHHHHHHHHHHHcCCCcccCCCCCCEEEEccCCeEEEeCCHHHHHhCCCCEEEEEEecCcchhhhcCCCC
Confidence 99999999999999999999999987778899999999999999999999999999999999999999999999988888
Q ss_pred ceEEEEEEECCCCeEEEEEEEcCChHHHHHHHHHHhcCC
Q 011787 435 EGIVKILAEKETDKILGVHIMAPNAGELIHEAAMATHDK 473 (477)
Q Consensus 435 ~~~~k~~~~~~~~~i~G~~~~g~~~~~~~~~~~~~~~~~ 473 (477)
+|++|+++|+++++|||+|++|++|.|+|+.+++||.++
T Consensus 419 ~g~~k~i~~~~~~~ilG~~~~g~~a~e~i~~~~~ai~~~ 457 (491)
T 3urh_A 419 DGFVKILADKETDRVLGGHIIGFGAGEMIHEIAVLMEFG 457 (491)
T ss_dssp CCEEEEEEETTTCBEEEEEEESTTHHHHHHHHHHHHHTT
T ss_pred cEEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHCC
Confidence 999999999999999999999999999999999999854
No 2
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=100.00 E-value=2.2e-72 Score=569.14 Aligned_cols=427 Identities=27% Similarity=0.385 Sum_probs=372.8
Q ss_pred CCCCcEEEECCChHHHHHHHHHHHCCCeEEEEecC--------CCCCceeeccCccCchhhhhhhHHHHHHHhhhhhCCc
Q 011787 41 SDENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKR--------GALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGV 112 (477)
Q Consensus 41 ~~~~dvvIIGgG~AGl~aA~~l~~~g~~V~lie~~--------~~~GG~~~~~~~~p~~~l~~~~~~~~~~~~~~~~~g~ 112 (477)
..+||++||||||||++||.+++++|.+|+|||+. ..+||+|+|.||+|+|.|+..+..++........+|+
T Consensus 40 ~ydYDviVIG~GpaG~~aA~~aa~~G~kValIE~~~~~~~~~k~~lGGtCln~GCIPsK~L~~aa~~~~~~~~~~~~~Gi 119 (542)
T 4b1b_A 40 TYDYDYVVIGGGPGGMASAKEAAAHGARVLLFDYVKPSSQGTKWGIGGTCVNVGCVPKKLMHYAGHMGSIFKLDSKAYGW 119 (542)
T ss_dssp CSSEEEEEECCSHHHHHHHHHHHTTTCCEEEECCCCCCTTCCCCCSSHHHHHHSHHHHHHHHHHHHHHHHHHHTGGGGTE
T ss_pred CCCCCEEEECCCHHHHHHHHHHHHCCCeEEEEeccccccccccCCCCCcccccchHHHHHHHHHHHHHHHHHhhhHhcCc
Confidence 34699999999999999999999999999999963 4589999999999999999988888777656677898
Q ss_pred cccccccChHHHHHHHHHHHHHHHHHHHHHhhhCCeEEEEeEEEEecCCEEEEEecC--CceEEEEecEEEEccCCCCCC
Q 011787 113 KFSSVEVDLPAMMAQKDKAVSNLTRGIEGLFKKNKVTYVKGYGKFISPSEVSVDTIE--GGNTVVKGKNIIIATGSDVKS 190 (477)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~v~~~~--g~~~~i~~d~lvlAtG~~~~~ 190 (477)
......++|.++..+.+..++.+...+...+++.+|+++.+.+.+++++++.|...+ +..+++++|++|||||++|..
T Consensus 120 ~~~~~~~d~~~~~~~~~~~v~~l~~~~~~~l~~~~V~~i~G~a~f~~~~~v~V~~~~~~~~~~~i~a~~iiIATGs~P~~ 199 (542)
T 4b1b_A 120 KFDNLKHDWKKLVTTVQSHIRSLNFSYMTGLRSSKVKYINGLAKLKDKNTVSYYLKGDLSKEETVTGKYILIATGCRPHI 199 (542)
T ss_dssp EEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEECEEEEEEETTEEEEEEC--CCCEEEEEEEEEEECCCEEECC
T ss_pred ccCcccccHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEeeeEEEcCCCcceEeecccCCceEEEeeeeEEeccCCCCCC
Confidence 888888999999999999999998888889999999999999999999999886543 345789999999999999987
Q ss_pred CCCCccCCceEecchhhhcccCCCCeeEEEcccHHHHHHHHHHHHcCCcEEEEEeCCCcCCCCCHHHHHHHHHHHHhcCc
Q 011787 191 LPGITIDEKRIVSSTGALALNEVPKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIVPSMDGEIRKQFQRSLEKQKM 270 (477)
Q Consensus 191 ~~g~~~~~~~~~~~~~~~~~~~~~~~v~IiG~G~~g~e~a~~l~~~g~~Vtli~~~~~~~~~~~~~~~~~~~~~l~~~gv 270 (477)
||..+.....++++++++.+++.|++++|||||++|+|+|..|+++|.+||++.+ +++++.+|+++.+.+++.|+++||
T Consensus 200 P~~~~~~~~~~~ts~~~l~l~~lP~~lvIIGgG~IGlE~A~~~~~lG~~VTii~~-~~~L~~~D~ei~~~l~~~l~~~gi 278 (542)
T 4b1b_A 200 PDDVEGAKELSITSDDIFSLKKDPGKTLVVGASYVALECSGFLNSLGYDVTVAVR-SIVLRGFDQQCAVKVKLYMEEQGV 278 (542)
T ss_dssp CSSSBTHHHHCBCHHHHTTCSSCCCSEEEECCSHHHHHHHHHHHHHTCCEEEEES-SCSSTTSCHHHHHHHHHHHHHTTC
T ss_pred CCcccCCCccccCchhhhccccCCceEEEECCCHHHHHHHHHHHhcCCeEEEecc-cccccccchhHHHHHHHHHHhhcc
Confidence 7766655667899999999999999999999999999999999999999999986 567899999999999999999999
Q ss_pred EEEeCceEEEEEEcCCeEEEEEeecCCCceEEEEcCEEEEeecCCCCCCCCCccccceeecCCCCe-ecCCCCCCCCCCe
Q 011787 271 KFMLKTKVVGVDLSGDGVKLTLEPAAGGEKTILEADVVLVSAGRTPFTAGLGLDKIGVETDKMGRI-PVNERFATNIPGV 349 (477)
Q Consensus 271 ~~~~~~~v~~i~~~~~~~~v~~~~~~~~~~~~i~~D~vi~a~G~~p~~~~l~~~~~gl~~~~~g~i-~vd~~l~t~~~~v 349 (477)
.++++..+.+++..++.+.+.+. ++..+.+|.|++|+|++||++.+.++.+|+.++.++++ .+|+++||++|+|
T Consensus 279 ~~~~~~~v~~~~~~~~~~~v~~~-----~~~~~~~D~vLvAvGR~Pnt~~L~le~~gv~~~~~~~~i~vd~~~~Ts~p~I 353 (542)
T 4b1b_A 279 MFKNGILPKKLTKMDDKILVEFS-----DKTSELYDTVLYAIGRKGDIDGLNLESLNMNVNKSNNKIIADHLSCTNIPSI 353 (542)
T ss_dssp EEEETCCEEEEEEETTEEEEEET-----TSCEEEESEEEECSCEEESCGGGCGGGTTCCEETTTTEECCCTTSBCSSTTE
T ss_pred eeecceEEEEEEecCCeEEEEEc-----CCCeEEEEEEEEcccccCCccccCcccceeeecccCceEeccccccccCCCe
Confidence 99999999999998888888775 55678899999999999999999999999999877665 7889999999999
Q ss_pred EEecccCCC-CCchhHHHHHHHHHHHHHcCCC-CCCCCCCCceEEEcCCCeeeecCCHHHHHHcCCCEEEEEEecCcccc
Q 011787 350 YAIGDVIPG-PMLAHKAEEDGVACVEFLAGKH-GHVDYDKVPGVVYTHPEVASVGKTEEQVKELGVEYRVGKFPFLANSR 427 (477)
Q Consensus 350 ya~GD~~~~-~~~~~~A~~~g~~aa~~i~~~~-~~~~~~~~p~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~ 427 (477)
||+|||++. |++++.|..||+++++||++.. ...++..+|+++|++|++++||+||+||++.+.++.+..+++....+
T Consensus 354 yAiGDv~~~~p~La~~A~~eg~~aa~~i~g~~~~~~d~~~iP~~vft~PeiA~VGlTE~eA~~~g~~~~v~~~~~~~~~~ 433 (542)
T 4b1b_A 354 FAVGDVAENVPELAPVAIKAGEILARRLFKDSDEIMDYSYIPTSIYTPIEYGACGYSEEKAYELYGKSNVEVFLQEFNNL 433 (542)
T ss_dssp EECTTSBTTCCCCHHHHHHHHHHHHHHHHSCCCCCCCCSSCCEEECSSSCEEEEECCHHHHHHHHCTTTEEEEEC-----
T ss_pred EEeccccCCchhHHHHHHHHHHHHHHHHhcCCCcccCCCCCceEEeCCCCeEEEeCCHHHHHHhCCCCcEEEEEeeccch
Confidence 999999965 7899999999999999999865 44689999999999999999999999999887766665555443222
Q ss_pred c-----------------hhcCCCceEEEEEE-ECCCCeEEEEEEEcCChHHHHHHHHHHhcCC
Q 011787 428 A-----------------KAIDDAEGIVKILA-EKETDKILGVHIMAPNAGELIHEAAMATHDK 473 (477)
Q Consensus 428 ~-----------------~~~~~~~~~~k~~~-~~~~~~i~G~~~~g~~~~~~~~~~~~~~~~~ 473 (477)
+ ....+++||+|+++ +++|++|||+|++|++|+|||+.+++||.+.
T Consensus 434 ~~~~~~~~~~~~~~~~~~~~~~~~~g~vKli~~~~~t~~ILGa~ivG~~A~ElI~~~alAi~~~ 497 (542)
T 4b1b_A 434 EISAVHRQKHIRAQKDEYDLDVSSTCLAKLVCLKNEDNRVIGFHYVGPNAGEVTQGMALALRLK 497 (542)
T ss_dssp ------------------------CCCEEEEEETTTTTBEEEEEEESTTHHHHHHHHHHHHHTC
T ss_pred hhhhhhhhhhhhcccccccccCCCceEEEEEEEeCCCCEEEEEEEECCCHHHHHHHHHHHHHcC
Confidence 1 12245679999985 5678999999999999999999999999854
No 3
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=100.00 E-value=4.8e-69 Score=544.77 Aligned_cols=430 Identities=49% Similarity=0.795 Sum_probs=394.4
Q ss_pred CCCcEEEECCChHHHHHHHHHHHCCCeEEEEecCC------CCCceeeccCccCchhhhhhhHHHHHHHhhhhhCCcccc
Q 011787 42 DENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRG------ALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFS 115 (477)
Q Consensus 42 ~~~dvvIIGgG~AGl~aA~~l~~~g~~V~lie~~~------~~GG~~~~~~~~p~~~l~~~~~~~~~~~~~~~~~g~~~~ 115 (477)
.+|||+|||||+||++||.+|++.|++|+|||++. .+||+|.+.+|+|++.++.....++.....+..+++...
T Consensus 2 ~~~DVvVIGgG~aGl~aA~~la~~G~~V~liEk~~~~gG~~~~GG~~~~~gciPsk~l~~~~~~~~~~~~~~~~~g~~~~ 81 (476)
T 3lad_A 2 QKFDVIVIGAGPGGYVAAIKSAQLGLKTALIEKYKGKEGKTALGGTCLNVGCIPSKALLDSSYKFHEAHESFKLHGISTG 81 (476)
T ss_dssp CCCSEEEECCSHHHHHHHHHHHHHTCCEEEEECCBCTTSSBCCSHHHHHHSHHHHHHHHHHHHHHHHHHTTSGGGTEECS
T ss_pred CcCCEEEECcCHHHHHHHHHHHhCCCEEEEEeCCCccCCCCCcCCccccccHHHHHHHHHHHHHHHHHHHHHHhcCcccC
Confidence 35899999999999999999999999999999975 489999999999999999888888877776778888777
Q ss_pred ccccChHHHHHHHHHHHHHHHHHHHHHhhhCCeEEEEeEEEEecCCEEEEEecCCceEEEEecEEEEccCCCCCCCCCCc
Q 011787 116 SVEVDLPAMMAQKDKAVSNLTRGIEGLFKKNKVTYVKGYGKFISPSEVSVDTIEGGNTVVKGKNIIIATGSDVKSLPGIT 195 (477)
Q Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~v~~~~g~~~~i~~d~lvlAtG~~~~~~~g~~ 195 (477)
...++|..+..+.....+.+...+...+++.+++++.+.+.+++.+.+.|...+|....+.||+||||||++|..+|+.+
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~~~~~~~~~~v~~~~g~~~~~~~d~lvlAtG~~p~~~~~~~ 161 (476)
T 3lad_A 82 EVAIDVPTMIARKDQIVRNLTGGVASLIKANGVTLFEGHGKLLAGKKVEVTAADGSSQVLDTENVILASGSKPVEIPPAP 161 (476)
T ss_dssp CCEECHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEESEEEECSTTCEEEECTTSCEEEECCSCEEECCCEEECCCTTSC
T ss_pred CCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEEecCCEEEEEcCCCceEEEEcCEEEEcCCCCCCCCCCCC
Confidence 77899999999999988888888888888899999999999999999999887776678999999999999987777766
Q ss_pred cCCceEecchhhhcccCCCCeeEEEcccHHHHHHHHHHHHcCCcEEEEEeCCCcCCCCCHHHHHHHHHHHHhcCcEEEeC
Q 011787 196 IDEKRIVSSTGALALNEVPKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIVPSMDGEIRKQFQRSLEKQKMKFMLK 275 (477)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~~v~IiG~G~~g~e~a~~l~~~g~~Vtli~~~~~~~~~~~~~~~~~~~~~l~~~gv~~~~~ 275 (477)
.+...++++.++..+...+++++|||+|++|+|+|..|++.|.+|+++++.+++++.+++++.+.+.+.+++.||+++++
T Consensus 162 ~~~~~v~~~~~~~~~~~~~~~v~ViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~l~~~l~~~Gv~v~~~ 241 (476)
T 3lad_A 162 VDQDVIVDSTGALDFQNVPGKLGVIGAGVIGLELGSVWARLGAEVTVLEAMDKFLPAVDEQVAKEAQKILTKQGLKILLG 241 (476)
T ss_dssp CCSSSEEEHHHHTSCSSCCSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSSTTSCHHHHHHHHHHHHHTTEEEEET
T ss_pred CCcccEEechhhhccccCCCeEEEECCCHHHHHHHHHHHHcCCcEEEEecCCCcCcccCHHHHHHHHHHHHhCCCEEEEC
Confidence 66778899999988888899999999999999999999999999999999999999999999999999999999999999
Q ss_pred ceEEEEEEcCCeEEEEEeecCCCceEEEEcCEEEEeecCCCCCCCCCccccceeecCCCCeecCCCCCCCCCCeEEeccc
Q 011787 276 TKVVGVDLSGDGVKLTLEPAAGGEKTILEADVVLVSAGRTPFTAGLGLDKIGVETDKMGRIPVNERFATNIPGVYAIGDV 355 (477)
Q Consensus 276 ~~v~~i~~~~~~~~v~~~~~~~~~~~~i~~D~vi~a~G~~p~~~~l~~~~~gl~~~~~g~i~vd~~l~t~~~~vya~GD~ 355 (477)
+++++++.+++++.+.+.+.. ..+++++|.|++|+|++|+++.+.++..|+.++++|+|.||+++||++|+|||+|||
T Consensus 242 ~~v~~i~~~~~~~~v~~~~~~--g~~~~~~D~vi~a~G~~p~~~~l~~~~~g~~~~~~G~i~vd~~~~t~~~~Iya~GD~ 319 (476)
T 3lad_A 242 ARVTGTEVKNKQVTVKFVDAE--GEKSQAFDKLIVAVGRRPVTTDLLAADSGVTLDERGFIYVDDYCATSVPGVYAIGDV 319 (476)
T ss_dssp CEEEEEEECSSCEEEEEESSS--EEEEEEESEEEECSCEEECCTTCCSSCCSCCBCTTSCBCCCTTSBCSSTTEEECGGG
T ss_pred CEEEEEEEcCCEEEEEEEeCC--CcEEEECCEEEEeeCCcccCCCCCccccCccccCCCCEeeCCCcccCCCCEEEEEcc
Confidence 999999988777777775311 126899999999999999998766888999999999999999999999999999999
Q ss_pred CCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCCceEEEcCCCeeeecCCHHHHHHcCCCEEEEEEecCccccchhcCCCc
Q 011787 356 IPGPMLAHKAEEDGVACVEFLAGKHGHVDYDKVPGVVYTHPEVASVGKTEEQVKELGVEYRVGKFPFLANSRAKAIDDAE 435 (477)
Q Consensus 356 ~~~~~~~~~A~~~g~~aa~~i~~~~~~~~~~~~p~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 435 (477)
++.|.+++.|..||++||+||++...++++..+|+++|++|+++++|+||+||++.|+++.++.+++....++.+.++++
T Consensus 320 ~~~~~~~~~A~~~g~~aa~~i~g~~~~~~~~~~p~~~~~~~~~a~vGlte~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~ 399 (476)
T 3lad_A 320 VRGAMLAHKASEEGVVVAERIAGHKAQMNYDLIPAVIYTHPEIAGVGKTEQALKAEGVAINVGVFPFAASGRAMAANDTA 399 (476)
T ss_dssp SSSCCCHHHHHHHHHHHHHHHHHCCCCCCTTCCCEEECSSSEEEEEECCHHHHHHTTCCEEEEEEEGGGCHHHHHHTCCC
T ss_pred CCCcccHHHHHHHHHHHHHHhcCCCcccCCCCCCEEEECcCCEEEeeCCHHHHHhcCCCEEEEEEeccccchheecCCCc
Confidence 99999999999999999999998877788999999999999999999999999999999999999999999999888889
Q ss_pred eEEEEEEECCCCeEEEEEEEcCChHHHHHHHHHHhcCC
Q 011787 436 GIVKILAEKETDKILGVHIMAPNAGELIHEAAMATHDK 473 (477)
Q Consensus 436 ~~~k~~~~~~~~~i~G~~~~g~~~~~~~~~~~~~~~~~ 473 (477)
+++|+++|++|++|||+|++|+++.|+|+.+++||.++
T Consensus 400 ~~~k~~~~~~~~~ilG~~~~g~~a~~~i~~~~~ai~~~ 437 (476)
T 3lad_A 400 GFVKVIADAKTDRVLGVHVIGPSAAELVQQGAIAMEFG 437 (476)
T ss_dssp CEEEEEEETTTCBEEEEEEEETTHHHHHHHHHHHHHHT
T ss_pred EEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHCC
Confidence 99999999999999999999999999999999999743
No 4
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=100.00 E-value=3.4e-67 Score=530.64 Aligned_cols=432 Identities=59% Similarity=0.976 Sum_probs=381.4
Q ss_pred CCCcEEEECCChHHHHHHHHHHHCCCeEEEEecCCCCCceeeccCccCchhhhhhhHHHHHHH-hhhhhCCccccccccC
Q 011787 42 DENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAM-HSFASHGVKFSSVEVD 120 (477)
Q Consensus 42 ~~~dvvIIGgG~AGl~aA~~l~~~g~~V~lie~~~~~GG~~~~~~~~p~~~l~~~~~~~~~~~-~~~~~~g~~~~~~~~~ 120 (477)
.++||+|||||+||++||..|++.|++|+|||+++.+||+|.+.+|+|++.++.....++... ..+..+|+.......+
T Consensus 5 ~~~dvvIIGgG~aGl~aA~~l~~~g~~V~liE~~~~~GG~~~~~g~~Psk~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 84 (474)
T 1zmd_A 5 IDADVTVIGSGPGGYVAAIKAAQLGFKTVCIEKNETLGGTCLNVGCIPSKALLNNSHYYHMAHGTDFASRGIEMSEVRLN 84 (474)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSSSSHHHHHHSHHHHHHHHHHHHHHHHHHSSHHHHTTEEESCEEEC
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCcCCcccccCccchHHHHHHHHHHHHhhhhhHhhCccccCCCccC
Confidence 358999999999999999999999999999999889999999999999998887766665443 1345667765556788
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhhhCCeEEEEeEEEEecCCEEEEEecCCceEEEEecEEEEccCCCCCCCCCCccCCce
Q 011787 121 LPAMMAQKDKAVSNLTRGIEGLFKKNKVTYVKGYGKFISPSEVSVDTIEGGNTVVKGKNIIIATGSDVKSLPGITIDEKR 200 (477)
Q Consensus 121 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~v~~~~g~~~~i~~d~lvlAtG~~~~~~~g~~~~~~~ 200 (477)
+..+..+..+..+.+...+...+++.+++++.+++.+++.+.+.|.+.+|...++.||+||+|||++|..+|..+.+...
T Consensus 85 ~~~~~~~~~~~~~~l~~~~~~~~~~~gv~~~~g~~~~~~~~~~~v~~~~gg~~~~~~d~lViAtGs~p~~p~i~g~~~~~ 164 (474)
T 1zmd_A 85 LDKMMEQKSTAVKALTGGIAHLFKQNKVVHVNGYGKITGKNQVTATKADGGTQVIDTKNILIATGSEVTPFPGITIDEDT 164 (474)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEESEEEEEETTEEEEECTTSCEEEEEEEEEEECCCEEECCCTTCCCCSSS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEEEecCCEEEEEecCCCcEEEEeCEEEECCCCCCCCCCCCCCCcCc
Confidence 99999888888888877778888889999999998888988888887763346799999999999998655443333446
Q ss_pred EecchhhhcccCCCCeeEEEcccHHHHHHHHHHHHcCCcEEEEEeCCCcCC-CCCHHHHHHHHHHHHhcCcEEEeCceEE
Q 011787 201 IVSSTGALALNEVPKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIVP-SMDGEIRKQFQRSLEKQKMKFMLKTKVV 279 (477)
Q Consensus 201 ~~~~~~~~~~~~~~~~v~IiG~G~~g~e~a~~l~~~g~~Vtli~~~~~~~~-~~~~~~~~~~~~~l~~~gv~~~~~~~v~ 279 (477)
+++++++..+...+++++|||+|++|+|+|..|++.|.+|+++++.+++++ .+++++.+.+.+.+++.||+++++++|+
T Consensus 165 v~t~~~~~~~~~~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~~l~~~l~~~Gv~i~~~~~v~ 244 (474)
T 1zmd_A 165 IVSSTGALSLKKVPEKMVVIGAGVIGVELGSVWQRLGADVTAVEFLGHVGGVGIDMEISKNFQRILQKQGFKFKLNTKVT 244 (474)
T ss_dssp EECHHHHTTCSSCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSCSSCCHHHHHHHHHHHHHTTCEEECSEEEE
T ss_pred EEcHHHHhhccccCceEEEECCCHHHHHHHHHHHHcCCEEEEEeccCccCCcccCHHHHHHHHHHHHHCCCEEEeCceEE
Confidence 888888888878899999999999999999999999999999999999999 9999999999999999999999999999
Q ss_pred EEEEcCCe-EEEEEeecCCCceEEEEcCEEEEeecCCCCCCCCCccccceeecCCCCeecCCCCCCCCCCeEEecccCCC
Q 011787 280 GVDLSGDG-VKLTLEPAAGGEKTILEADVVLVSAGRTPFTAGLGLDKIGVETDKMGRIPVNERFATNIPGVYAIGDVIPG 358 (477)
Q Consensus 280 ~i~~~~~~-~~v~~~~~~~~~~~~i~~D~vi~a~G~~p~~~~l~~~~~gl~~~~~g~i~vd~~l~t~~~~vya~GD~~~~ 358 (477)
+++.++++ +.+++.+...++++++++|.|++|+|++||+..+.++++|++++++|+|.||+++||+.|+|||+|||++.
T Consensus 245 ~i~~~~~~~~~v~~~~~~~~~~~~i~~D~vv~a~G~~p~~~~l~l~~~g~~~~~~G~i~vd~~~~t~~~~IyA~GD~~~~ 324 (474)
T 1zmd_A 245 GATKKSDGKIDVSIEAASGGKAEVITCDVLLVCIGRRPFTKNLGLEELGIELDPRGRIPVNTRFQTKIPNIYAIGDVVAG 324 (474)
T ss_dssp EEEECTTSCEEEEEEETTSCCCEEEEESEEEECSCEEECCTTSSHHHHTCCCCTTSCCCCCTTCBCSSTTEEECGGGSSS
T ss_pred EEEEcCCceEEEEEEecCCCCceEEEcCEEEECcCCCcCCCcCCchhcCCccCCCCCEEECcCCccCCCCEEEeeecCCC
Confidence 99877665 66665433334667899999999999999998765678899998889999999999999999999999999
Q ss_pred CCchhHHHHHHHHHHHHHcCCCCCCCCCCCceEEEcCCCeeeecCCHHHHHHcCCCEEEEEEecCccccchhcCCCceEE
Q 011787 359 PMLAHKAEEDGVACVEFLAGKHGHVDYDKVPGVVYTHPEVASVGKTEEQVKELGVEYRVGKFPFLANSRAKAIDDAEGIV 438 (477)
Q Consensus 359 ~~~~~~A~~~g~~aa~~i~~~~~~~~~~~~p~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 438 (477)
+.+++.|..||+.||.||++...++++..+|+++|++|+++++|++|++++..|+++++..+++....++...+++++|+
T Consensus 325 ~~~~~~A~~~g~~aa~~i~~~~~~~~~~~~p~~~~~~~~~a~vG~~e~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 404 (474)
T 1zmd_A 325 PMLAHKAEDEGIICVEGMAGGAVHIDYNCVPSVIYTHPEVAWVGKSEEQLKEEGIEYKVGKFPFAANSRAKTNADTDGMV 404 (474)
T ss_dssp CCCHHHHHHHHHHHHHHHTTCCCCCCGGGCCEEECSSSEEEEEECCHHHHHHHTCCEEEEEEEGGGCHHHHHTTCCCCEE
T ss_pred CccHHHHHHHHHHHHHHhcCCCCcCCCCCCCEEEECCCCeEEEeCCHHHHHhcCCCEEEEEEecccchhhhhcCCCcEEE
Confidence 99999999999999999998766678889999999999999999999999999999999999999888888878888999
Q ss_pred EEEEECCCCeEEEEEEEcCChHHHHHHHHHHhcCC
Q 011787 439 KILAEKETDKILGVHIMAPNAGELIHEAAMATHDK 473 (477)
Q Consensus 439 k~~~~~~~~~i~G~~~~g~~~~~~~~~~~~~~~~~ 473 (477)
|+++|+++++|+|+|++|+++.|+|+.+++||.++
T Consensus 405 k~~~~~~~~~ilG~~~~g~~a~~~i~~~~~ai~~~ 439 (474)
T 1zmd_A 405 KILGQKSTDRVLGAHILGPGAGEMVNEAALALEYG 439 (474)
T ss_dssp EEEEETTTCBEEEEEEEETTHHHHHHHHHHHHHHT
T ss_pred EEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHCC
Confidence 99999989999999999999999999999999743
No 5
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=100.00 E-value=5.6e-67 Score=528.23 Aligned_cols=430 Identities=58% Similarity=0.944 Sum_probs=380.3
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCeEEEEecCCCCCceeeccCccCchhhhhhhHHHHHHHhhhhhCCccc-cccccCh
Q 011787 43 ENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKF-SSVEVDL 121 (477)
Q Consensus 43 ~~dvvIIGgG~AGl~aA~~l~~~g~~V~lie~~~~~GG~~~~~~~~p~~~l~~~~~~~~~~~~~~~~~g~~~-~~~~~~~ 121 (477)
++||+|||||+||++||.+|++.|++|+|||+++.+||+|.+.+|+|++.++.....++.....+..+|+.. ....+++
T Consensus 2 ~~dvvIIGgG~aGl~aA~~l~~~g~~V~lie~~~~~GG~~~~~g~~psk~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 81 (468)
T 2qae_A 2 PYDVVVIGGGPGGYVASIKAAQLGMKTACVEKRGALGGTCLNVGCIPSKALLHATHLYHDAHANFARYGLMGGEGVTMDS 81 (468)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHTHHHHTEECGGGCEECH
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCcCCcCCCcCcHhHHHHHHHHHHHHHHHHHHHhcCcccCCCCccCH
Confidence 489999999999999999999999999999998899999999999999998877776666554355667765 4456789
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhCCeEEEEeEEEEecCCEEEEEecCCceEEEEecEEEEccCCCCCCCCCCccCCceE
Q 011787 122 PAMMAQKDKAVSNLTRGIEGLFKKNKVTYVKGYGKFISPSEVSVDTIEGGNTVVKGKNIIIATGSDVKSLPGITIDEKRI 201 (477)
Q Consensus 122 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~v~~~~g~~~~i~~d~lvlAtG~~~~~~~g~~~~~~~~ 201 (477)
..+..+.....+.+...+...+++.+++++.+++.+++.+.+.+.+.+|....+.||+||+|||++|..+|..+.+...+
T Consensus 82 ~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~g~~~~i~~~~~~v~~~~G~~~~~~~d~lviAtG~~p~~p~~~g~~~~~v 161 (468)
T 2qae_A 82 AKMQQQKERAVKGLTGGVEYLFKKNKVTYYKGEGSFETAHSIRVNGLDGKQEMLETKKTIIATGSEPTELPFLPFDEKVV 161 (468)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEEEEEEETTEEEEEETTSCEEEEEEEEEEECCCEEECCBTTBCCCSSSE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEEEeeCCEEEEEecCCceEEEEcCEEEECCCCCcCCCCCCCCCcCce
Confidence 99998888888888777788888889999999988899999999877765568999999999999886544333334468
Q ss_pred ecchhhhcccCCCCeeEEEcccHHHHHHHHHHHHcCCcEEEEEeCCCcCCCCCHHHHHHHHHHH-HhcCcEEEeCceEEE
Q 011787 202 VSSTGALALNEVPKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIVPSMDGEIRKQFQRSL-EKQKMKFMLKTKVVG 280 (477)
Q Consensus 202 ~~~~~~~~~~~~~~~v~IiG~G~~g~e~a~~l~~~g~~Vtli~~~~~~~~~~~~~~~~~~~~~l-~~~gv~~~~~~~v~~ 280 (477)
++.+++..+...+++++|||+|++|+|+|..+++.|.+|+++++.+++++.+|+++.+.+.+.+ +++||+++++++|++
T Consensus 162 ~t~~~~~~~~~~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~~d~~~~~~l~~~l~~~~gv~i~~~~~v~~ 241 (468)
T 2qae_A 162 LSSTGALALPRVPKTMVVIGGGVIGLELGSVWARLGAEVTVVEFAPRCAPTLDEDVTNALVGALAKNEKMKFMTSTKVVG 241 (468)
T ss_dssp ECHHHHHTCSSCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSTTSCHHHHHHHHHHHHHHTCCEEECSCEEEE
T ss_pred echHHHhhcccCCceEEEECCCHHHHHHHHHHHHhCCEEEEEecCCcccccCCHHHHHHHHHHHhhcCCcEEEeCCEEEE
Confidence 8999998888889999999999999999999999999999999999999999999999999999 999999999999999
Q ss_pred EEEcCCeEEEEEeecCCCceEEEEcCEEEEeecCCCCCCCCCccccceeecCCCCeecCCCCCCCCCCeEEecccCC-CC
Q 011787 281 VDLSGDGVKLTLEPAAGGEKTILEADVVLVSAGRTPFTAGLGLDKIGVETDKMGRIPVNERFATNIPGVYAIGDVIP-GP 359 (477)
Q Consensus 281 i~~~~~~~~v~~~~~~~~~~~~i~~D~vi~a~G~~p~~~~l~~~~~gl~~~~~g~i~vd~~l~t~~~~vya~GD~~~-~~ 359 (477)
++.+++++.+.+.. .+++.+++++|.|++|+|++||+..+.++++|++++++|+|.||+++||+.|+|||+|||++ .+
T Consensus 242 i~~~~~~~~v~~~~-~~g~~~~i~~D~vv~a~G~~p~~~~l~l~~~gl~~~~~G~i~vd~~~~t~~~~IyA~GD~~~~~~ 320 (468)
T 2qae_A 242 GTNNGDSVSLEVEG-KNGKRETVTCEALLVSVGRRPFTGGLGLDKINVAKNERGFVKIGDHFETSIPDVYAIGDVVDKGP 320 (468)
T ss_dssp EEECSSSEEEEEEC-C---EEEEEESEEEECSCEEECCTTSCHHHHTCCBCTTSCBCCCTTSBCSSTTEEECGGGBSSSC
T ss_pred EEEcCCeEEEEEEc-CCCceEEEECCEEEECCCcccCCCCCCchhcCCccCCCCCEeECCCcccCCCCEEEeeccCCCCC
Confidence 98876666666542 12233689999999999999999876667889999888999999999999999999999999 89
Q ss_pred CchhHHHHHHHHHHHHHcCCCCCCCCCCCceEEEcCCCeeeecCCHHHHHHcCCCEEEEEEecCccccchhcCCCceEEE
Q 011787 360 MLAHKAEEDGVACVEFLAGKHGHVDYDKVPGVVYTHPEVASVGKTEEQVKELGVEYRVGKFPFLANSRAKAIDDAEGIVK 439 (477)
Q Consensus 360 ~~~~~A~~~g~~aa~~i~~~~~~~~~~~~p~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k 439 (477)
.+++.|..||++||.||++...++++..+|+++|++|+++++|++|++|+..|+++++..+++....++...+++.+|+|
T Consensus 321 ~~~~~A~~~g~~aa~~i~~~~~~~~~~~~p~~~~~~~~~a~vG~~e~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~k 400 (468)
T 2qae_A 321 MLAHKAEDEGVACAEILAGKPGHVNYGVIPAVIYTMPEVASVGKSEDELKKEGVAYKVGKFPFNANSRAKAVSTEDGFVK 400 (468)
T ss_dssp SCHHHHHHHHHHHHHHHTTCCCCCCTTSCCEEECSSSEEEEEECCHHHHHHTTCCEEEEEEEGGGCHHHHHTTCCCCEEE
T ss_pred ccHhHHHHHHHHHHHHHcCCCccCCCCCCCEEEECCCceEEEeCCHHHHHhcCCCEEEEEEecccchhhhhcCCCcEEEE
Confidence 99999999999999999987766788889999999999999999999999999999999999998888888888889999
Q ss_pred EEEECCCCeEEEEEEEcCChHHHHHHHHHHhcCC
Q 011787 440 ILAEKETDKILGVHIMAPNAGELIHEAAMATHDK 473 (477)
Q Consensus 440 ~~~~~~~~~i~G~~~~g~~~~~~~~~~~~~~~~~ 473 (477)
+++|+++++|+|+|++|+++.|+|+.+++||.++
T Consensus 401 l~~~~~~~~ilG~~~~g~~a~e~i~~~~~ai~~~ 434 (468)
T 2qae_A 401 VLVDKATDRILGVHIVCTTAGELIGEACLAMEYG 434 (468)
T ss_dssp EEEETTTCBEEEEEEEETTHHHHHHHHHHHHHTT
T ss_pred EEEECCCCEEEEEEEECCCHHHHHHHHHHHHHCC
Confidence 9999989999999999999999999999999854
No 6
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=100.00 E-value=3.9e-67 Score=531.05 Aligned_cols=432 Identities=55% Similarity=0.916 Sum_probs=384.6
Q ss_pred CCCcEEEECCChHHHHHHHHHHHCCCeEEEEecCCCCCceeeccCccCchhhhhhhHHHHHHHhhhhhCCccc-cccccC
Q 011787 42 DENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKF-SSVEVD 120 (477)
Q Consensus 42 ~~~dvvIIGgG~AGl~aA~~l~~~g~~V~lie~~~~~GG~~~~~~~~p~~~l~~~~~~~~~~~~~~~~~g~~~-~~~~~~ 120 (477)
.++||+|||||+||+++|..|++.|++|+|||+++.+||+|.+.+|+|++.++.....++.....+..+++.. ....++
T Consensus 4 ~~~dVvIIGgG~aGl~aA~~l~~~G~~V~liE~~~~~GG~~~~~g~~psk~l~~~~~~~~~~~~~~~~~gi~~~~~~~~~ 83 (478)
T 1v59_A 4 KSHDVVIIGGGPAGYVAAIKAAQLGFNTACVEKRGKLGGTCLNVGCIPSKALLNNSHLFHQMHTEAQKRGIDVNGDIKIN 83 (478)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHTSGGGTEEECSCEEEC
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCeEEEEecCCCcCCccceeccHHHHHHHHHHHHHHHHHHHHHhcCcccCCCCccC
Confidence 4589999999999999999999999999999998899999999999999999888777777665566677765 445678
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhhhCCeEEEEeEEEEecCCEEEEEecCCceEE------EEecEEEEccCCCCCCCCCC
Q 011787 121 LPAMMAQKDKAVSNLTRGIEGLFKKNKVTYVKGYGKFISPSEVSVDTIEGGNTV------VKGKNIIIATGSDVKSLPGI 194 (477)
Q Consensus 121 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~v~~~~g~~~~------i~~d~lvlAtG~~~~~~~g~ 194 (477)
+..+..+.......+...+...+++.+++++.++..+.+.+.+.|.+.+|.... +.||+||+|||++|+.+|+.
T Consensus 84 ~~~~~~~~~~~~~~l~~~~~~~~~~~gv~~~~g~~~~~~~~~v~V~~~~G~~~~~~~~~~i~~d~lViAtGs~p~~~~g~ 163 (478)
T 1v59_A 84 VANFQKAKDDAVKQLTGGIELLFKKNKVTYYKGNGSFEDETKIRVTPVDGLEGTVKEDHILDVKNIIVATGSEVTPFPGI 163 (478)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEESEEEESSSSEEEEECCTTCTTCCSSCEEEEEEEEEECCCEEECCCTTC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEEEccCCeEEEEecCCCcccccccceEEeCEEEECcCCCCCCCCCC
Confidence 888888888888877777778888899999999988888888888876663235 99999999999999878887
Q ss_pred ccCCceEecchhhhcccCCCCeeEEEcccHHHHHHHHHHHHcCCcEEEEEeCCCcCCCCCHHHHHHHHHHHHhcCcEEEe
Q 011787 195 TIDEKRIVSSTGALALNEVPKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIVPSMDGEIRKQFQRSLEKQKMKFML 274 (477)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~v~IiG~G~~g~e~a~~l~~~g~~Vtli~~~~~~~~~~~~~~~~~~~~~l~~~gv~~~~ 274 (477)
+..+..+++++++..+...+++++|||+|++|+|+|..|++.|.+|+++++.+++++.+++++.+.+.+.+++.||++++
T Consensus 164 ~~~~~~v~~~~~~~~~~~~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~l~~~l~~~gv~i~~ 243 (478)
T 1v59_A 164 EIDEEKIVSSTGALSLKEIPKRLTIIGGGIIGLEMGSVYSRLGSKVTVVEFQPQIGASMDGEVAKATQKFLKKQGLDFKL 243 (478)
T ss_dssp CCCSSSEECHHHHTTCSSCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSSSSCHHHHHHHHHHHHHTTCEEEC
T ss_pred CCCCceEEcHHHHHhhhccCceEEEECCCHHHHHHHHHHHHcCCEEEEEEeCCccccccCHHHHHHHHHHHHHCCCEEEe
Confidence 65555688999988888889999999999999999999999999999999999999999999999999999999999999
Q ss_pred CceEEEEEE--cCCeEEEEEeecCCCceEEEEcCEEEEeecCCCCCCCCCccccceeecCCCCeecCCCCCCCCCCeEEe
Q 011787 275 KTKVVGVDL--SGDGVKLTLEPAAGGEKTILEADVVLVSAGRTPFTAGLGLDKIGVETDKMGRIPVNERFATNIPGVYAI 352 (477)
Q Consensus 275 ~~~v~~i~~--~~~~~~v~~~~~~~~~~~~i~~D~vi~a~G~~p~~~~l~~~~~gl~~~~~g~i~vd~~l~t~~~~vya~ 352 (477)
+++|++++. +++.+.+++.+..+++++++++|.|++|+|++||++.+.++++|++++++|+|.||+++||+.|+|||+
T Consensus 244 ~~~v~~i~~~~~~~~~~v~~~~~~~g~~~~~~~D~vv~a~G~~p~~~~l~l~~~g~~~~~~G~i~vd~~~~t~~~~IyA~ 323 (478)
T 1v59_A 244 STKVISAKRNDDKNVVEIVVEDTKTNKQENLEAEVLLVAVGRRPYIAGLGAEKIGLEVDKRGRLVIDDQFNSKFPHIKVV 323 (478)
T ss_dssp SEEEEEEEEETTTTEEEEEEEETTTTEEEEEEESEEEECSCEEECCTTSCTTTTTCCBCTTSCBCCCTTSBCSSTTEEEC
T ss_pred CCEEEEEEEecCCCeEEEEEEEcCCCCceEEECCEEEECCCCCcCCCCCCchhcCceeCCCCCEeECcCCccCCCCEEEe
Confidence 999999987 555666666543344567899999999999999998544788899999889999999999999999999
Q ss_pred cccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCCceEEEcCCCeeeecCCHHHHHHcCCCEEEEEEecCccccchhcC
Q 011787 353 GDVIPGPMLAHKAEEDGVACVEFLAGKHGHVDYDKVPGVVYTHPEVASVGKTEEQVKELGVEYRVGKFPFLANSRAKAID 432 (477)
Q Consensus 353 GD~~~~~~~~~~A~~~g~~aa~~i~~~~~~~~~~~~p~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 432 (477)
|||++.+.+++.|..||+.||+||++...+++|..+|+++|++|+++++|+++++|+..|+++.+..+++....++...+
T Consensus 324 GD~~~~~~~~~~A~~~g~~aa~~i~~~~~~~~~~~~p~~~~~~~~~a~vG~~e~~a~~~g~~~~~~~~~~~~~~~~~~~~ 403 (478)
T 1v59_A 324 GDVTFGPMLAHKAEEEGIAAVEMLKTGHGHVNYNNIPSVMYSHPEVAWVGKTEEQLKEAGIDYKIGKFPFAANSRAKTNQ 403 (478)
T ss_dssp GGGSSSCCCHHHHHHHHHHHHHHHHHSCCCCCTTSCCEEECSSSEEEEEECCHHHHHHTTCCEEEEEEEGGGCHHHHHTT
T ss_pred eccCCCcccHHHHHHHHHHHHHHHcCCCCCCCCCCCCEEEEcCCcEEEEECCHHHHHHcCCCEEEEEEecccchhhhhcC
Confidence 99999999999999999999999998666678899999999999999999999999999999999999999888887777
Q ss_pred CCceEEEEEEECCCCeEEEEEEEcCChHHHHHHHHHHhcCC
Q 011787 433 DAEGIVKILAEKETDKILGVHIMAPNAGELIHEAAMATHDK 473 (477)
Q Consensus 433 ~~~~~~k~~~~~~~~~i~G~~~~g~~~~~~~~~~~~~~~~~ 473 (477)
++.+++|+++|+++++|+|++++|+++.|+|+.+++||.++
T Consensus 404 ~~~~~~k~~~~~~~~~ilG~~~~g~~a~~~i~~~~~~i~~~ 444 (478)
T 1v59_A 404 DTEGFVKILIDSKTERILGAHIIGPNAGEMIAEAGLALEYG 444 (478)
T ss_dssp CCCCEEEEEEETTTCBEEEEEEEETTHHHHHHHHHHHHHTT
T ss_pred CCcEEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHCC
Confidence 78899999999889999999999999999999999999854
No 7
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=100.00 E-value=5.5e-67 Score=529.71 Aligned_cols=431 Identities=43% Similarity=0.670 Sum_probs=380.0
Q ss_pred CCCCCcEEEECCChHHHHHHHHHHHCCCeEEEEecCCCCCceeeccCccCchhhhhhhHHHHHHHhhhhhCCcccccccc
Q 011787 40 ASDENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSVEV 119 (477)
Q Consensus 40 ~~~~~dvvIIGgG~AGl~aA~~l~~~g~~V~lie~~~~~GG~~~~~~~~p~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~ 119 (477)
|+.++||+|||||+||+++|..|++.|++|+|||+++.+||+|.+.+|+|++.++.....+... ..+..+++......+
T Consensus 3 m~~~~dVvIIGaG~aGl~aA~~l~~~G~~V~liE~~~~~GG~~~~~g~~psk~ll~~~~~~~~~-~~~~~~gi~~~~~~~ 81 (482)
T 1ojt_A 3 ADAEYDVVVLGGGPGGYSAAFAAADEGLKVAIVERYKTLGGVCLNVGCIPSKALLHNAAVIDEV-RHLAANGIKYPEPEL 81 (482)
T ss_dssp SEEEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSCSSHHHHHHSHHHHHHHHHHHHHHHHH-HHGGGGTCCCCCCCC
T ss_pred CCCcCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCCCCceeeecccchHHHHHHHHHHHHH-HHHHhCCcccCCCcc
Confidence 3446899999999999999999999999999999988999999999999999888776666555 335567777666678
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHHhhhCCeEEEEeEEEEecCCEEEEEecCC----------ceEEEEecEEEEccCCCCC
Q 011787 120 DLPAMMAQKDKAVSNLTRGIEGLFKKNKVTYVKGYGKFISPSEVSVDTIEG----------GNTVVKGKNIIIATGSDVK 189 (477)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~v~~~~g----------~~~~i~~d~lvlAtG~~~~ 189 (477)
++..+..+.......+...+...+++.+++++.++..+++.+.+.+.+.+| +..+++||+||+|||++|.
T Consensus 82 ~~~~~~~~~~~~~~~l~~~~~~~~~~~gv~~~~g~~~~~~~~~v~v~~~~g~~~~~~~~~g~~~~i~ad~lViAtGs~p~ 161 (482)
T 1ojt_A 82 DIDMLRAYKDGVVSRLTGGLAGMAKSRKVDVIQGDGQFLDPHHLEVSLTAGDAYEQAAPTGEKKIVAFKNCIIAAGSRVT 161 (482)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEEEEEEETTEEEEEEEEEEETTEEEEEEEEEEEEEEEEEECCCEEEC
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHhCCcEEEeeEEEEccCCEEEEEecCCcccccccccCcceEEEcCEEEECCCCCCC
Confidence 899999888888888877788888889999999998888888888865433 2257999999999999987
Q ss_pred CCCCCccCCceEecchhhhcccCCCCeeEEEcccHHHHHHHHHHHHcCCcEEEEEeCCCcCCCCCHHHHHHHHHHHHhcC
Q 011787 190 SLPGITIDEKRIVSSTGALALNEVPKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIVPSMDGEIRKQFQRSLEKQK 269 (477)
Q Consensus 190 ~~~g~~~~~~~~~~~~~~~~~~~~~~~v~IiG~G~~g~e~a~~l~~~g~~Vtli~~~~~~~~~~~~~~~~~~~~~l~~~g 269 (477)
.+|+++.+. .+++.+++..+...+++++|||+|++|+|+|..|++.|.+|+++++.+++++.+++++.+.+.+.|++.|
T Consensus 162 ~~~~i~~~~-~v~~~~~~~~~~~~~~~vvViGgG~ig~E~A~~l~~~G~~Vtlv~~~~~~l~~~~~~~~~~l~~~l~~~g 240 (482)
T 1ojt_A 162 KLPFIPEDP-RIIDSSGALALKEVPGKLLIIGGGIIGLEMGTVYSTLGSRLDVVEMMDGLMQGADRDLVKVWQKQNEYRF 240 (482)
T ss_dssp CCSSCCCCT-TEECHHHHTTCCCCCSEEEEESCSHHHHHHHHHHHHHTCEEEEECSSSSSSTTSCHHHHHHHHHHHGGGE
T ss_pred CCCCCCccC-cEEcHHHHhcccccCCeEEEECCCHHHHHHHHHHHHcCCeEEEEEECCccccccCHHHHHHHHHHHHhcC
Confidence 666444333 5888899888888899999999999999999999999999999999999999999999999999999999
Q ss_pred cEEEeCceEEEEEEcCCeEEEEEeecCCCceEEEEcCEEEEeecCCCCCCCCCccccceeecCCCCeecCCCCCCCCCCe
Q 011787 270 MKFMLKTKVVGVDLSGDGVKLTLEPAAGGEKTILEADVVLVSAGRTPFTAGLGLDKIGVETDKMGRIPVNERFATNIPGV 349 (477)
Q Consensus 270 v~~~~~~~v~~i~~~~~~~~v~~~~~~~~~~~~i~~D~vi~a~G~~p~~~~l~~~~~gl~~~~~g~i~vd~~l~t~~~~v 349 (477)
|+++++++|.+++.+++++.+++.+. .+.++++++|.|++|+|++||++.+.++.+|++++++|+|.||+++||+.|+|
T Consensus 241 V~i~~~~~v~~i~~~~~~~~v~~~~~-~~~g~~~~~D~vv~a~G~~p~~~~l~~~~~gl~~~~~G~i~vd~~~~t~~~~I 319 (482)
T 1ojt_A 241 DNIMVNTKTVAVEPKEDGVYVTFEGA-NAPKEPQRYDAVLVAAGRAPNGKLISAEKAGVAVTDRGFIEVDKQMRTNVPHI 319 (482)
T ss_dssp EEEECSCEEEEEEEETTEEEEEEESS-SCCSSCEEESCEEECCCEEECGGGTTGGGTTCCCCTTSCCCCCTTSBCSSTTE
T ss_pred CEEEECCEEEEEEEcCCeEEEEEecc-CCCceEEEcCEEEECcCCCcCCCCCChhhcCceeCCCCCEeeCCCcccCCCCE
Confidence 99999999999988777777766521 11145789999999999999998766788899999889999999999999999
Q ss_pred EEecccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCCceEEEcCCCeeeecCCHHHHHHcCCCEEEEEEecCccccch
Q 011787 350 YAIGDVIPGPMLAHKAEEDGVACVEFLAGKHGHVDYDKVPGVVYTHPEVASVGKTEEQVKELGVEYRVGKFPFLANSRAK 429 (477)
Q Consensus 350 ya~GD~~~~~~~~~~A~~~g~~aa~~i~~~~~~~~~~~~p~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~ 429 (477)
||+|||++.+.+++.|..||++||.||++...++++..+|+++|++|+++++|+||++|+..++++.+..+++....++.
T Consensus 320 yA~GD~~~~~~l~~~A~~~g~~aa~~i~g~~~~~~~~~~p~~~~~~~~~a~vG~te~~a~~~g~~~~~~~~~~~~~~~~~ 399 (482)
T 1ojt_A 320 YAIGDIVGQPMLAHKAVHEGHVAAENCAGHKAYFDARVIPGVAYTSPEVAWVGETELSAKASARKITKANFPWAASGRAI 399 (482)
T ss_dssp EECGGGTCSSCCHHHHHHHHHHHHHHHTTCCCCCCCCCCCEEECSSSCEEEEECCHHHHHHHTCCEEEEEEEGGGCHHHH
T ss_pred EEEEcccCCCccHHHHHHHHHHHHHHHcCCCccCCCCCCCEEEEcCCCeEEEeCCHHHHHhcCCCEEEEEEEcCcchHHh
Confidence 99999999999999999999999999998776678888999999999999999999999999999999999999888888
Q ss_pred hcCCCceEEEEEEECCCCeEEEEEEEcCChHHHHHHHHHHhcCC
Q 011787 430 AIDDAEGIVKILAEKETDKILGVHIMAPNAGELIHEAAMATHDK 473 (477)
Q Consensus 430 ~~~~~~~~~k~~~~~~~~~i~G~~~~g~~~~~~~~~~~~~~~~~ 473 (477)
..+++.+|+|+++|+++++|+|+|++|+++.|+|+.+++||.++
T Consensus 400 ~~~~~~~~~k~~~~~~~~~ilG~~~~g~~a~e~i~~~~~ai~~~ 443 (482)
T 1ojt_A 400 ANGCDKPFTKLIFDAETGRIIGGGIVGPNGGDMIGEVCLAIEMG 443 (482)
T ss_dssp HTTCCSCEEEEEEETTTCBEEEEEEESTTHHHHHHHHHHHHHTT
T ss_pred hcCCCcEEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHCC
Confidence 88888899999999999999999999999999999999999854
No 8
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=100.00 E-value=7.4e-67 Score=528.12 Aligned_cols=433 Identities=88% Similarity=1.312 Sum_probs=382.0
Q ss_pred CCCCcEEEECCChHHHHHHHHHHHCCCeEEEEecCCCCCceeeccCccCchhhhhhhHHHHHHHhhhhhCCccccccccC
Q 011787 41 SDENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSVEVD 120 (477)
Q Consensus 41 ~~~~dvvIIGgG~AGl~aA~~l~~~g~~V~lie~~~~~GG~~~~~~~~p~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~~ 120 (477)
+.++||+|||||+||++||..|++.|++|+|||+++.+||+|.+.+|+|++.++.....++.....+..+++.......+
T Consensus 4 ~~~~dvvIIGaG~aGl~aA~~l~~~g~~V~liE~~~~~GG~~~~~g~~p~k~l~~~~~~~~~~~~~~~~~g~~~~~~~~~ 83 (470)
T 1dxl_A 4 SDENDVVIIGGGPGGYVAAIKAAQLGFKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAKHSFANHGVKVSNVEID 83 (470)
T ss_dssp CCCCCEEEECCSHHHHHHHHHHHHHTCCEEEEECSSSSCCSHHHHSHHHHHHHHHHHHHHHHHHHTHHHHTEEESCEEEC
T ss_pred CccCCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCccccccCcCccchHHHHHHHHHHHHHHHHHHhcCcccCCCccC
Confidence 34689999999999999999999999999999998899999999999999988877766665544355567765555678
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhhhCCeEEEEeEEEEecCCEEEEEecCCceEEEEecEEEEccCCCCCCCCCCccCCce
Q 011787 121 LPAMMAQKDKAVSNLTRGIEGLFKKNKVTYVKGYGKFISPSEVSVDTIEGGNTVVKGKNIIIATGSDVKSLPGITIDEKR 200 (477)
Q Consensus 121 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~v~~~~g~~~~i~~d~lvlAtG~~~~~~~g~~~~~~~ 200 (477)
+..+..+.......+...+...+++.+++++.+++.+++.+.+.|.+.+|....++||+||+|||++|..++..+.+...
T Consensus 84 ~~~~~~~~~~~~~~l~~~~~~~~~~~gv~~~~g~~~~~~~~~~~v~~~~G~~~~i~~d~lIiAtGs~p~~p~~~g~~~~~ 163 (470)
T 1dxl_A 84 LAAMMGQKDKAVSNLTRGIEGLFKKNKVTYVKGYGKFVSPSEISVDTIEGENTVVKGKHIIIATGSDVKSLPGVTIDEKK 163 (470)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEESCEEEEETTEEEECCSSSCCEEEECSEEEECCCEEECCBTTBCCCSSS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEEecCCEEEEEeCCCceEEEEcCEEEECCCCCCCCCCCCCCCccc
Confidence 99998888887777777777778888999999988888888888887666446799999999999988655433333446
Q ss_pred EecchhhhcccCCCCeeEEEcccHHHHHHHHHHHHcCCcEEEEEeCCCcCCCCCHHHHHHHHHHHHhcCcEEEeCceEEE
Q 011787 201 IVSSTGALALNEVPKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIVPSMDGEIRKQFQRSLEKQKMKFMLKTKVVG 280 (477)
Q Consensus 201 ~~~~~~~~~~~~~~~~v~IiG~G~~g~e~a~~l~~~g~~Vtli~~~~~~~~~~~~~~~~~~~~~l~~~gv~~~~~~~v~~ 280 (477)
+++..+...+...+++++|||+|++|+|+|..|++.|.+|+++++.+++++.+++++.+.+.+.+++.||++++++++.+
T Consensus 164 v~~~~~~~~~~~~~~~vvViGgG~~g~e~A~~l~~~g~~Vtli~~~~~~l~~~~~~~~~~l~~~l~~~gv~i~~~~~v~~ 243 (470)
T 1dxl_A 164 IVSSTGALALSEIPKKLVVIGAGYIGLEMGSVWGRIGSEVTVVEFASEIVPTMDAEIRKQFQRSLEKQGMKFKLKTKVVG 243 (470)
T ss_dssp EECHHHHTTCSSCCSEEEESCCSHHHHHHHHHHHHHTCEEEEECSSSSSSTTSCHHHHHHHHHHHHHSSCCEECSEEEEE
T ss_pred EEeHHHhhhhhhcCCeEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCcccccccHHHHHHHHHHHHHcCCEEEeCCEEEE
Confidence 88888888888889999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEcCCeEEEEEeecCCCceEEEEcCEEEEeecCCCCCCCCCccccceeecCCCCeecCCCCCCCCCCeEEecccCCCCC
Q 011787 281 VDLSGDGVKLTLEPAAGGEKTILEADVVLVSAGRTPFTAGLGLDKIGVETDKMGRIPVNERFATNIPGVYAIGDVIPGPM 360 (477)
Q Consensus 281 i~~~~~~~~v~~~~~~~~~~~~i~~D~vi~a~G~~p~~~~l~~~~~gl~~~~~g~i~vd~~l~t~~~~vya~GD~~~~~~ 360 (477)
++.+++++.+.+.+..+++++++++|.|++|+|++||++.+.++++|++++++|+|.||+++||+.|+|||+|||++.+.
T Consensus 244 i~~~~~~~~v~~~~~~~g~~~~~~~D~vv~a~G~~p~~~~l~~~~~gl~~~~~G~i~vd~~~~t~~~~Iya~GD~~~~~~ 323 (470)
T 1dxl_A 244 VDTSGDGVKLTVEPSAGGEQTIIEADVVLVSAGRTPFTSGLNLDKIGVETDKLGRILVNERFSTNVSGVYAIGDVIPGPM 323 (470)
T ss_dssp EECSSSSEEEEEEESSSCCCEEEEESEEECCCCEEECCTTSCCTTTTCCBCSSSCBCCCTTCBCSSTTEEECSTTSSSCC
T ss_pred EEEcCCeEEEEEEecCCCcceEEECCEEEECCCCCcCCCCCCchhcCCccCCCCCEeECcCCccCCCCEEEEeccCCCCc
Confidence 98776667666653223445789999999999999999876678889999888999999999999999999999999999
Q ss_pred chhHHHHHHHHHHHHHcCCCCCCCCCCCceEEEcCCCeeeecCCHHHHHHcCCCEEEEEEecCccccchhcCCCceEEEE
Q 011787 361 LAHKAEEDGVACVEFLAGKHGHVDYDKVPGVVYTHPEVASVGKTEEQVKELGVEYRVGKFPFLANSRAKAIDDAEGIVKI 440 (477)
Q Consensus 361 ~~~~A~~~g~~aa~~i~~~~~~~~~~~~p~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~ 440 (477)
+++.|..||++||.||++...++++..+|+++|++|+++++|+++++|+..|+++.+..+++....++...+++++|+|+
T Consensus 324 ~~~~A~~~g~~aa~~i~g~~~~~~~~~~p~~~~~~~~~a~vG~~e~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~k~ 403 (470)
T 1dxl_A 324 LAHKAEEDGVACVEYLAGKVGHVDYDKVPGVVYTNPEVASVGKTEEQVKETGVEYRVGKFPFMANSRAKAIDNAEGLVKI 403 (470)
T ss_dssp CHHHHHHHHHHHHHHHTTSCCCCCTTSCCEEECSSSEEEEEECCHHHHHHTTCCEEEEEEEGGGCHHHHHHSCCCCEEEE
T ss_pred cHHHHHHHHHHHHHHHcCCCcCCCCCCCCEEEECCCceEEEcCCHHHHHhcCCcEEEEEEecccchHHHhcCCCcEEEEE
Confidence 99999999999999999877667888999999999999999999999999999999999999988888888888899999
Q ss_pred EEECCCCeEEEEEEEcCChHHHHHHHHHHhcCC
Q 011787 441 LAEKETDKILGVHIMAPNAGELIHEAAMATHDK 473 (477)
Q Consensus 441 ~~~~~~~~i~G~~~~g~~~~~~~~~~~~~~~~~ 473 (477)
++|+++++|+|++++|+++.|+|+.+++||.++
T Consensus 404 ~~~~~~~~ilG~~~~g~~a~~~i~~~~~ai~~~ 436 (470)
T 1dxl_A 404 IAEKETDKILGVHIMAPNAGELIHEAAIALQYD 436 (470)
T ss_dssp EEETTTCBEEEEEEEETTHHHHHHHHHHHHHTT
T ss_pred EEECCCCEEEEEEEECCCHHHHHHHHHHHHHCC
Confidence 999989999999999999999999999999754
No 9
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=100.00 E-value=8.6e-66 Score=517.72 Aligned_cols=425 Identities=44% Similarity=0.735 Sum_probs=376.9
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCeEEEEecCCCCCceeeccCccCchhhhhhhHHHHHHHhhhhhCCccccccccChH
Q 011787 43 ENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSVEVDLP 122 (477)
Q Consensus 43 ~~dvvIIGgG~AGl~aA~~l~~~g~~V~lie~~~~~GG~~~~~~~~p~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 122 (477)
++||+|||||+||++||.+|++.|++|+|||++ .+||+|.+.+|+|++.++.....++... .+..+++.+.....++.
T Consensus 3 ~~dvvIIGgG~aGl~aA~~l~~~g~~V~lie~~-~~gG~~~~~g~~p~k~l~~~~~~~~~~~-~~~~~g~~~~~~~~~~~ 80 (455)
T 1ebd_A 3 ETETLVVGAGPGGYVAAIRAAQLGQKVTIVEKG-NLGGVCLNVGCIPSKALISASHRYEQAK-HSEEMGIKAENVTIDFA 80 (455)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHTTCCEEEEESS-CTTHHHHHTSHHHHHHHHHHHHHHHHHH-TCGGGTEECCSCEECHH
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEEECC-CCCCcCcCcCchhhHHHHHHHHHHHHHH-HHHhcCcccCCCccCHH
Confidence 489999999999999999999999999999996 8999999999999998887776665543 45566776655668899
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhCCeEEEEeEEEEecCCEEEEEecCCceEEEEecEEEEccCCCCCCCCCCccCCceEe
Q 011787 123 AMMAQKDKAVSNLTRGIEGLFKKNKVTYVKGYGKFISPSEVSVDTIEGGNTVVKGKNIIIATGSDVKSLPGITIDEKRIV 202 (477)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~v~~~~g~~~~i~~d~lvlAtG~~~~~~~g~~~~~~~~~ 202 (477)
.+..+.....+.+...+...+++.+++++.+++.+++++.+.+.+.+| ..++.||+||+|||++|..++..+.+.. ++
T Consensus 81 ~~~~~~~~~~~~l~~~~~~~~~~~gv~~~~g~~~~id~~~v~V~~~~G-~~~i~~d~lViATGs~p~~~~~~g~~~~-v~ 158 (455)
T 1ebd_A 81 KVQEWKASVVKKLTGGVEGLLKGNKVEIVKGEAYFVDANTVRVVNGDS-AQTYTFKNAIIATGSRPIELPNFKFSNR-IL 158 (455)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTTCEEEESEEEEEETTEEEEEETTE-EEEEECSEEEECCCEEECCBTTBCCCSS-EE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEEEccCCeEEEEeCCC-cEEEEeCEEEEecCCCCCCCCCCCccce-Ee
Confidence 988888888887878788888889999999998888988888887665 2579999999999999865443332233 78
Q ss_pred cchhhhcccCCCCeeEEEcccHHHHHHHHHHHHcCCcEEEEEeCCCcCCCCCHHHHHHHHHHHHhcCcEEEeCceEEEEE
Q 011787 203 SSTGALALNEVPKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIVPSMDGEIRKQFQRSLEKQKMKFMLKTKVVGVD 282 (477)
Q Consensus 203 ~~~~~~~~~~~~~~v~IiG~G~~g~e~a~~l~~~g~~Vtli~~~~~~~~~~~~~~~~~~~~~l~~~gv~~~~~~~v~~i~ 282 (477)
+.++...+...+++++|||+|++|+|+|..|++.|.+|+++++.+++++.+++++.+.+.+.+++.||+++++++|++++
T Consensus 159 ~~~~~~~~~~~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~l~~~l~~~gv~i~~~~~v~~i~ 238 (455)
T 1ebd_A 159 DSTGALNLGEVPKSLVVIGGGYIGIELGTAYANFGTKVTILEGAGEILSGFEKQMAAIIKKRLKKKGVEVVTNALAKGAE 238 (455)
T ss_dssp CHHHHHTCSSCCSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSSTTSCHHHHHHHHHHHHHTTCEEEESEEEEEEE
T ss_pred cHHHHhccccCCCeEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCccccccCHHHHHHHHHHHHHCCCEEEeCCEEEEEE
Confidence 88888888778999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred EcCCeEEEEEeecCCCceEEEEcCEEEEeecCCCCCCCCCccccceeecCCCCeecCCCCCCCCCCeEEecccCCCCCch
Q 011787 283 LSGDGVKLTLEPAAGGEKTILEADVVLVSAGRTPFTAGLGLDKIGVETDKMGRIPVNERFATNIPGVYAIGDVIPGPMLA 362 (477)
Q Consensus 283 ~~~~~~~v~~~~~~~~~~~~i~~D~vi~a~G~~p~~~~l~~~~~gl~~~~~g~i~vd~~l~t~~~~vya~GD~~~~~~~~ 362 (477)
.+++++.+++.. +++++++++|.|++|+|++|+++.+.++.+|++++++|+|.||+++||+.|+|||+|||++.+.++
T Consensus 239 ~~~~~~~v~~~~--~g~~~~~~~D~vv~a~G~~p~~~~l~~~~~g~~~~~~G~i~vd~~~~t~~~~Iya~GD~~~~~~~~ 316 (455)
T 1ebd_A 239 EREDGVTVTYEA--NGETKTIDADYVLVTVGRRPNTDELGLEQIGIKMTNRGLIEVDQQCRTSVPNIFAIGDIVPGPALA 316 (455)
T ss_dssp EETTEEEEEEEE--TTEEEEEEESEEEECSCEEESCSSSSTTTTTCCBCTTSCBCCCTTCBCSSTTEEECGGGSSSCCCH
T ss_pred EeCCeEEEEEEe--CCceeEEEcCEEEECcCCCcccCcCChhhcCCccCCCCCEeeCCCcccCCCCEEEEeccCCCcccH
Confidence 877777666542 335678999999999999999987666888999988899999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHcCCCCCCCCCCCceEEEcCCCeeeecCCHHHHHHcCCCEEEEEEecCccccchhcCCCceEEEEEE
Q 011787 363 HKAEEDGVACVEFLAGKHGHVDYDKVPGVVYTHPEVASVGKTEEQVKELGVEYRVGKFPFLANSRAKAIDDAEGIVKILA 442 (477)
Q Consensus 363 ~~A~~~g~~aa~~i~~~~~~~~~~~~p~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~ 442 (477)
+.|..||+.||.||++...++++..+|+++|++|+++++|+++++|+..|+++.+..+++....++...+++.+|+|+++
T Consensus 317 ~~A~~~g~~aa~~i~~~~~~~~~~~~p~~~~~~~~~a~vG~~e~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~ 396 (455)
T 1ebd_A 317 HKASYEGKVAAEAIAGHPSAVDYVAIPAVVFSDPECASVGYFEQQAKDEGIDVIAAKFPFAANGRALALNDTDGFLKLVV 396 (455)
T ss_dssp HHHHHHHHHHHHHHTSCCCCCCCSCCCEEECSSSCEEEEECCHHHHHTTTCCEEEEEEEGGGCHHHHHHTCCCCEEEEEE
T ss_pred HHHHHHHHHHHHHHcCCCccCCCCCCCEEEECCCceEEEeCCHHHHHhcCCCEEEEEEEcCcchHHhhcCCCcEEEEEEE
Confidence 99999999999999987766788899999999999999999999999999999999999998888888888889999999
Q ss_pred ECCCCeEEEEEEEcCChHHHHHHHHHHhcCC
Q 011787 443 EKETDKILGVHIMAPNAGELIHEAAMATHDK 473 (477)
Q Consensus 443 ~~~~~~i~G~~~~g~~~~~~~~~~~~~~~~~ 473 (477)
|+++++|+|+|++|+++.|+|+.+++||.++
T Consensus 397 ~~~~~~ilG~~~~g~~a~e~i~~~~~ai~~~ 427 (455)
T 1ebd_A 397 RKEDGVIIGAQIIGPNASDMIAELGLAIEAG 427 (455)
T ss_dssp ETTTTEEEEEEEESTTHHHHHHHHHHHHHHT
T ss_pred ECCCCEEEEEEEeCCCHHHHHHHHHHHHHCC
Confidence 9989999999999999999999999999743
No 10
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=100.00 E-value=8.9e-66 Score=518.08 Aligned_cols=421 Identities=47% Similarity=0.776 Sum_probs=370.6
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCeEEEEecCCCCCceeeccCccCchhhhhhhHHHHHHHhhhhhCCccccccccChH
Q 011787 43 ENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSVEVDLP 122 (477)
Q Consensus 43 ~~dvvIIGgG~AGl~aA~~l~~~g~~V~lie~~~~~GG~~~~~~~~p~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 122 (477)
++||+|||||+||++||..|++.|++|+|||++. +||+|.+.+|+|++.++.....++... ....+|+. ....+++.
T Consensus 6 ~~dvvIIG~G~aG~~aA~~l~~~g~~V~lie~~~-~GG~~~~~g~iP~k~l~~~~~~~~~~~-~~~~~g~~-~~~~~~~~ 82 (464)
T 2eq6_A 6 TYDLIVIGTGPGGYHAAIRAAQLGLKVLAVEAGE-VGGVCLNVGCIPTKALLHAAETLHHLK-VAEGFGLK-AKPELDLK 82 (464)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSC-TTHHHHHTSHHHHHHHHHHHHHHHHHH-HHGGGTEE-CCCEECHH
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCeEEEEeCCC-CCCCCCCcChHHHHHHHHHHHHHHHHH-hHHhcCCC-CCCCcCHH
Confidence 5899999999999999999999999999999966 999999999999998887776665553 34556765 44568899
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhCCeEEEEeEEEEecCCEEEEEecCCceEEEEecEEEEccCCCCCCCCCCccCCceEe
Q 011787 123 AMMAQKDKAVSNLTRGIEGLFKKNKVTYVKGYGKFISPSEVSVDTIEGGNTVVKGKNIIIATGSDVKSLPGITIDEKRIV 202 (477)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~v~~~~g~~~~i~~d~lvlAtG~~~~~~~g~~~~~~~~~ 202 (477)
.+..+..+..+.+...+..++++.+++++.+++.+++.+.+.+. | .++.||+||||||++|..+|+++.+ ..++
T Consensus 83 ~~~~~~~~~~~~l~~~~~~~~~~~gv~~~~g~~~~~~~~~v~v~---g--~~~~~d~lViATGs~p~~p~gi~~~-~~v~ 156 (464)
T 2eq6_A 83 KLGGWRDQVVKKLTGGVGTLLKGNGVELLRGFARLVGPKEVEVG---G--ERYGAKSLILATGSEPLELKGFPFG-EDVW 156 (464)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTCEEEESCEEEEETTEEEET---T--EEEEEEEEEECCCEEECCBTTBCCS-SSEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCEEEeeeEEEccCCEEEEc---c--EEEEeCEEEEcCCCCCCCCCCCCCC-CcEE
Confidence 99988888888877777788888999999998888887766553 4 5899999999999998766655432 2578
Q ss_pred cchhhhcccC-CCCeeEEEcccHHHHHHHHHHHHcCCcEEEEEeCCCcCCCCCHHHHHHHHHHHHhcCcEEEeCceEEEE
Q 011787 203 SSTGALALNE-VPKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIVPSMDGEIRKQFQRSLEKQKMKFMLKTKVVGV 281 (477)
Q Consensus 203 ~~~~~~~~~~-~~~~v~IiG~G~~g~e~a~~l~~~g~~Vtli~~~~~~~~~~~~~~~~~~~~~l~~~gv~~~~~~~v~~i 281 (477)
+++++..+.. .+++++|||+|++|+|+|..|++.|.+|+++++.+++++.+++++.+.+.+.+++.||+++++++|+++
T Consensus 157 ~~~~~~~l~~~~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~l~~~l~~~gV~i~~~~~v~~i 236 (464)
T 2eq6_A 157 DSTRALKVEEGLPKRLLVIGGGAVGLELGQVYRRLGAEVTLIEYMPEILPQGDPETAALLRRALEKEGIRVRTKTKAVGY 236 (464)
T ss_dssp CHHHHTCGGGCCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSTTSCHHHHHHHHHHHHHTTCEEECSEEEEEE
T ss_pred cHHHHHhhhhhcCCEEEEECCCHHHHHHHHHHHHCCCeEEEEEcCCccccccCHHHHHHHHHHHHhcCCEEEcCCEEEEE
Confidence 8888888877 799999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEcCCeEEEEEeecCCCceEEEEcCEEEEeecCCCCCCCCCccccceeecCCCCeecCCCCCCCCCCeEEecccCCCCCc
Q 011787 282 DLSGDGVKLTLEPAAGGEKTILEADVVLVSAGRTPFTAGLGLDKIGVETDKMGRIPVNERFATNIPGVYAIGDVIPGPML 361 (477)
Q Consensus 282 ~~~~~~~~v~~~~~~~~~~~~i~~D~vi~a~G~~p~~~~l~~~~~gl~~~~~g~i~vd~~l~t~~~~vya~GD~~~~~~~ 361 (477)
+.+++++.+++.+..++...++++|.|++|+|++|++..+.++..|+.++++|+|.||+++||+.|+|||+|||++.+.+
T Consensus 237 ~~~~~~~~v~~~~~~~g~~~~i~~D~vv~a~G~~p~~~~l~l~~~g~~~~~~G~i~vd~~~~t~~~~Iya~GD~~~~~~l 316 (464)
T 2eq6_A 237 EKKKDGLHVRLEPAEGGEGEEVVVDKVLVAVGRKPRTEGLGLEKAGVKVDERGFIRVNARMETSVPGVYAIGDAARPPLL 316 (464)
T ss_dssp EEETTEEEEEEEETTCCSCEEEEESEEEECSCEEESCTTSSHHHHTCCBCTTSCBCCCTTCBCSSTTEEECGGGTCSSCC
T ss_pred EEeCCEEEEEEeecCCCceeEEEcCEEEECCCcccCCCCCChhhcCceecCCCCEEECCCcccCCCCEEEEeccCCCccc
Confidence 88777776766421113334899999999999999998765678899988889999999999999999999999999999
Q ss_pred hhHHHHHHHHHHHHHcCCCCCCCCCCCceEEEcCCCeeeecCCHHHHHHcCCCEEEEEEecCccccchhcCCCceEEEEE
Q 011787 362 AHKAEEDGVACVEFLAGKHGHVDYDKVPGVVYTHPEVASVGKTEEQVKELGVEYRVGKFPFLANSRAKAIDDAEGIVKIL 441 (477)
Q Consensus 362 ~~~A~~~g~~aa~~i~~~~~~~~~~~~p~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~ 441 (477)
++.|..||+.||.||++...++++. +|++.|++|+++++|+++++++..|+++.+..+++....++...+++.+|+|++
T Consensus 317 ~~~A~~~g~~aa~~i~g~~~~~~~~-~p~~~~~~~~~a~vG~~e~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~k~~ 395 (464)
T 2eq6_A 317 AHKAMREGLIAAENAAGKDSAFDYQ-VPSVVYTSPEWAGVGLTEEEAKRAGYKVKVGKFPLAASGRALTLGGAEGMVKVV 395 (464)
T ss_dssp HHHHHHHHHHHHHHHTTCCCCCCCC-CCEEECSSSEEEEEECCHHHHHHTTCCEEEEEEEGGGCHHHHHTSCCCCEEEEE
T ss_pred HHHHHHHHHHHHHHhcCCCcccCCC-CCeEEECCCCEEEEeCCHHHHHhcCCCEEEEEEEcCcchhhhhcCCCcEEEEEE
Confidence 9999999999999999876667788 999999999999999999999999999999999999888888877888999999
Q ss_pred EECCCCeEEEEEEEcCChHHHHHHHHHHhcCC
Q 011787 442 AEKETDKILGVHIMAPNAGELIHEAAMATHDK 473 (477)
Q Consensus 442 ~~~~~~~i~G~~~~g~~~~~~~~~~~~~~~~~ 473 (477)
+|+++++|+|+|++|+++.|+|+.+++||.++
T Consensus 396 ~~~~~~~ilG~~~~g~~a~e~i~~~~~ai~~~ 427 (464)
T 2eq6_A 396 GDEETDLLLGVFIVGPQAGELIAEAALALEMG 427 (464)
T ss_dssp EETTTCBEEEEEEEETTHHHHHHHHHHHHHTT
T ss_pred EECCCCEEEEEEEECCCHHHHHHHHHHHHHCC
Confidence 99889999999999999999999999999754
No 11
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=100.00 E-value=4.5e-66 Score=521.05 Aligned_cols=426 Identities=38% Similarity=0.609 Sum_probs=374.6
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCeEEEEecCCCCCceeeccCccCchhhhhhhHHHHHHHhhhhhCCccccccccChH
Q 011787 43 ENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSVEVDLP 122 (477)
Q Consensus 43 ~~dvvIIGgG~AGl~aA~~l~~~g~~V~lie~~~~~GG~~~~~~~~p~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 122 (477)
++||+|||||+||+++|..|++.|++|+|||++ .+||+|.+.+|+|++.++.....++.....+..+++. ....+++.
T Consensus 3 ~~dvvIIGaG~aGl~aA~~l~~~G~~V~liE~~-~~gG~~~~~g~~psk~ll~~~~~~~~~~~~~~~~g~~-~~~~~~~~ 80 (464)
T 2a8x_A 3 HYDVVVLGAGPGGYVAAIRAAQLGLSTAIVEPK-YWGGVCLNVGCIPSKALLRNAELVHIFTKDAKAFGIS-GEVTFDYG 80 (464)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSS-CTTHHHHHHSHHHHHHHHHHHHHHHHHHHHTTTTTEE-ECCEECHH
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCC-CCCCcccccCchhhHHHHHHHHHHHHHHHHHHhcCCC-CCCccCHH
Confidence 489999999999999999999999999999996 8999999999999998887777666655445556665 44567888
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhCCeEEEEeEEEEecCCEEEEEecCCceEEEEecEEEEccCCCCCCCCCCccCCceEe
Q 011787 123 AMMAQKDKAVSNLTRGIEGLFKKNKVTYVKGYGKFISPSEVSVDTIEGGNTVVKGKNIIIATGSDVKSLPGITIDEKRIV 202 (477)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~v~~~~g~~~~i~~d~lvlAtG~~~~~~~g~~~~~~~~~ 202 (477)
.+..+.......+...+...+++.+++++.++...++.+.+.+.+.+|...++.||+||+|||++|..++..+.+.. ++
T Consensus 81 ~~~~~~~~~~~~l~~~l~~~~~~~gv~~~~g~~~~id~~~v~V~~~~G~~~~~~~d~lViAtG~~~~~~~~~g~~~~-~~ 159 (464)
T 2a8x_A 81 IAYDRSRKVAEGRVAGVHFLMKKNKITEIHGYGTFADANTLLVDLNDGGTESVTFDNAIIATGSSTRLVPGTSLSAN-VV 159 (464)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTCEEECEEEEESSSSEEEEEETTSCCEEEEEEEEEECCCEEECCCTTCCCBTT-EE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEEecCCeEEEEeCCCceEEEEcCEEEECCCCCCCCCCCCCCCce-EE
Confidence 88887777777777777778888899999998888888888888777644679999999999998865443332223 78
Q ss_pred cchhhhcccCCCCeeEEEcccHHHHHHHHHHHHcCCcEEEEEeCCCcCCCCCHHHHHHHHHHHHhcCcEEEeCceEEEEE
Q 011787 203 SSTGALALNEVPKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIVPSMDGEIRKQFQRSLEKQKMKFMLKTKVVGVD 282 (477)
Q Consensus 203 ~~~~~~~~~~~~~~v~IiG~G~~g~e~a~~l~~~g~~Vtli~~~~~~~~~~~~~~~~~~~~~l~~~gv~~~~~~~v~~i~ 282 (477)
+.++...+...+++++|||+|++|+|+|..|++.|.+|+++++.+++++.+++++.+.+.+.+++.||++++++++++++
T Consensus 160 ~~~~~~~~~~~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~l~~~l~~~gv~i~~~~~v~~i~ 239 (464)
T 2a8x_A 160 TYEEQILSRELPKSIIIAGAGAIGMEFGYVLKNYGVDVTIVEFLPRALPNEDADVSKEIEKQFKKLGVTILTATKVESIA 239 (464)
T ss_dssp CHHHHHTCSSCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSTTSCHHHHHHHHHHHHHHTCEEECSCEEEEEE
T ss_pred ecHHHhhccccCCeEEEECCcHHHHHHHHHHHHcCCeEEEEEcCCccccccCHHHHHHHHHHHHHcCCEEEeCcEEEEEE
Confidence 88888888888999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred EcCCeEEEEEeecCCCceEEEEcCEEEEeecCCCCCCCCCccccceeecCCCCeecCCCCCCCCCCeEEecccCCCCCch
Q 011787 283 LSGDGVKLTLEPAAGGEKTILEADVVLVSAGRTPFTAGLGLDKIGVETDKMGRIPVNERFATNIPGVYAIGDVIPGPMLA 362 (477)
Q Consensus 283 ~~~~~~~v~~~~~~~~~~~~i~~D~vi~a~G~~p~~~~l~~~~~gl~~~~~g~i~vd~~l~t~~~~vya~GD~~~~~~~~ 362 (477)
.+++++.+.+. .+++.+++++|.|++|+|++||++.+.++++|+.++++|+|.||+++||+.|+|||+|||++.+.++
T Consensus 240 ~~~~~~~v~~~--~~g~~~~~~~D~vv~a~G~~p~~~~l~~~~~gl~~~~~G~i~vd~~~~t~~~~IyA~GD~~~~~~~~ 317 (464)
T 2a8x_A 240 DGGSQVTVTVT--KDGVAQELKAEKVLQAIGFAPNVEGYGLDKAGVALTDRKAIGVDDYMRTNVGHIYAIGDVNGLLQLA 317 (464)
T ss_dssp ECSSCEEEEEE--SSSCEEEEEESEEEECSCEEECCSSSCHHHHTCCBCTTSSBCCCTTSBCSSTTEEECGGGGCSSCSH
T ss_pred EcCCeEEEEEE--cCCceEEEEcCEEEECCCCCccCCCCCchhcCCccCCCCCEeECcCCccCCCCEEEeECcCCCccCH
Confidence 77666666654 1234478999999999999999987666888999988899999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHcC-CCCC-CCCCCCceEEEcCCCeeeecCCHHHHHHcCCCEEEEEEecCccccchhcCCCceEEEE
Q 011787 363 HKAEEDGVACVEFLAG-KHGH-VDYDKVPGVVYTHPEVASVGKTEEQVKELGVEYRVGKFPFLANSRAKAIDDAEGIVKI 440 (477)
Q Consensus 363 ~~A~~~g~~aa~~i~~-~~~~-~~~~~~p~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~ 440 (477)
+.|..||++||.||++ ...+ ++|..+|+++|++|+++++|+++++|+..|+++++..+++....++...+++++|+|+
T Consensus 318 ~~A~~~g~~aa~~i~g~~~~~~~~~~~~p~~~~~~~~~a~vG~~e~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~k~ 397 (464)
T 2a8x_A 318 HVAEAQGVVAAETIAGAETLTLGDHRMLPRATFCQPNVASFGLTEQQARNEGYDVVVAKFPFTANAKAHGVGDPSGFVKL 397 (464)
T ss_dssp HHHHHHHHHHHHHHHTCCCCCCCCGGGSCEEECSSSEEEEEECCHHHHHHTTCCEEEEEEEGGGCHHHHHHTCCCCEEEE
T ss_pred HHHHHHHHHHHHHhcCCCCcccCCCCCCCEEEECCCCeEEEcCCHHHHHhcCCCEEEEEEEcchhhhhhhcCCCcEEEEE
Confidence 9999999999999998 5555 6788889999999999999999999999999999999999988888888888899999
Q ss_pred EEECCCCeEEEEEEEcCChHHHHHHHHHHhcCC
Q 011787 441 LAEKETDKILGVHIMAPNAGELIHEAAMATHDK 473 (477)
Q Consensus 441 ~~~~~~~~i~G~~~~g~~~~~~~~~~~~~~~~~ 473 (477)
++|+++++|+|+|++|+++.|+|+.+++||.++
T Consensus 398 ~~~~~~~~ilG~~~~g~~a~e~i~~~~~ai~~~ 430 (464)
T 2a8x_A 398 VADAKHGELLGGHLVGHDVAELLPELTLAQRWD 430 (464)
T ss_dssp EEETTTTEEEEEEEEETTGGGGHHHHHHHHHTT
T ss_pred EEECCCCEEEEEEEECcCHHHHHHHHHHHHHCC
Confidence 999989999999999999999999999999854
No 12
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=100.00 E-value=1.1e-65 Score=520.11 Aligned_cols=424 Identities=28% Similarity=0.469 Sum_probs=372.2
Q ss_pred CCCCcEEEECCChHHHHHHHHHHHCCCeEEEEecCCCCCceeeccCccCchhhhhhhHHHHHHHhhhhhCCccccccccC
Q 011787 41 SDENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSVEVD 120 (477)
Q Consensus 41 ~~~~dvvIIGgG~AGl~aA~~l~~~g~~V~lie~~~~~GG~~~~~~~~p~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~~ 120 (477)
+.++||+|||||+||++||..|++.|++|+|||+ +.+||+|.+.+|+|++.++.....+... ..+..+++......++
T Consensus 18 ~~~~dVvIIGgG~aGl~aA~~la~~G~~V~liE~-~~~GG~~~~~gc~p~k~l~~~~~~~~~~-~~~~~~g~~~~~~~~~ 95 (478)
T 3dk9_A 18 VASYDYLVIGGGSGGLASARRAAELGARAAVVES-HKLGGTCVNVGCVPKKVMWNTAVHSEFM-HDHADYGFPSCEGKFN 95 (478)
T ss_dssp EEECSEEEECCSHHHHHHHHHHHHTTCCEEEEES-SCTTHHHHHHSHHHHHHHHHHHHHHHHH-TTTTTTTSCCCCCCCC
T ss_pred CCCCCEEEECCCHHHHHHHHHHHhCCCeEEEEec-CCCCCcccccCccchHHHHHHHHHHHHH-HHHHhcCccCCCCccC
Confidence 3468999999999999999999999999999997 5899999999999999988877666544 3456677776667889
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhhhCCeEEEEeEEEEecCCEEEEEecCCceEEEEecEEEEccCCCCCCC-----CCCc
Q 011787 121 LPAMMAQKDKAVSNLTRGIEGLFKKNKVTYVKGYGKFISPSEVSVDTIEGGNTVVKGKNIIIATGSDVKSL-----PGIT 195 (477)
Q Consensus 121 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~v~~~~g~~~~i~~d~lvlAtG~~~~~~-----~g~~ 195 (477)
|..+..+.......+...+...+++.+++++.+.+.+++...+.+. .++ .++.||+||||||++|..+ ||..
T Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~g~~~~~~~~~~~v~-~~g--~~~~~d~lviAtG~~p~~p~~~~i~G~~ 172 (478)
T 3dk9_A 96 WRVIKEKRDAYVSRLNAIYQNNLTKSHIEIIRGHAAFTSDPKPTIE-VSG--KKYTAPHILIATGGMPSTPHESQIPGAS 172 (478)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEESCEEECSCSSCEEE-ETT--EEEECSCEEECCCEEECCCCTTTSTTGG
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCcEEEEeEEEEeeCCeEEEE-ECC--EEEEeeEEEEccCCCCCCCCcCCCCCCc
Confidence 9999999999988888888888889999999999999988776666 345 6799999999999988544 3332
Q ss_pred cCCceEecchhhhcccCCCCeeEEEcccHHHHHHHHHHHHcCCcEEEEEeCCCcCCCCCHHHHHHHHHHHHhcCcEEEeC
Q 011787 196 IDEKRIVSSTGALALNEVPKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIVPSMDGEIRKQFQRSLEKQKMKFMLK 275 (477)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~~v~IiG~G~~g~e~a~~l~~~g~~Vtli~~~~~~~~~~~~~~~~~~~~~l~~~gv~~~~~ 275 (477)
.+++++++..+...+++++|||+|++|+|+|..|++.|.+|+++++.+++++.+++++.+.+.+.+++.||+++++
T Consensus 173 ----~~~~~~~~~~~~~~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~~d~~~~~~~~~~l~~~gv~i~~~ 248 (478)
T 3dk9_A 173 ----LGITSDGFFQLEELPGRSVIVGAGYIAVEMAGILSALGSKTSLMIRHDKVLRSFDSMISTNCTEELENAGVEVLKF 248 (478)
T ss_dssp ----GSBCHHHHTTCCSCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCTTSCHHHHHHHHHHHHHTTCEEETT
T ss_pred ----eeEchHHhhchhhcCccEEEECCCHHHHHHHHHHHHcCCeEEEEEeCCccccccCHHHHHHHHHHHHHCCCEEEeC
Confidence 4567888888888899999999999999999999999999999999999999999999999999999999999999
Q ss_pred ceEEEEEEcCCe--EEEEEeecCCCc--eEEEEcCEEEEeecCCCCCCCCCccccceeecCCCCeecCCCCCCCCCCeEE
Q 011787 276 TKVVGVDLSGDG--VKLTLEPAAGGE--KTILEADVVLVSAGRTPFTAGLGLDKIGVETDKMGRIPVNERFATNIPGVYA 351 (477)
Q Consensus 276 ~~v~~i~~~~~~--~~v~~~~~~~~~--~~~i~~D~vi~a~G~~p~~~~l~~~~~gl~~~~~g~i~vd~~l~t~~~~vya 351 (477)
+.+++++.++++ +.+.+.+...+. +.++++|.|++|+|++|++..+.++.+|++++++|+|.||+++||++|+|||
T Consensus 249 ~~v~~i~~~~~~~~~~v~~~~~~~g~~~g~~~~~D~vi~a~G~~p~~~~l~l~~~g~~~~~~G~i~vd~~~~t~~~~IyA 328 (478)
T 3dk9_A 249 SQVKEVKKTLSGLEVSMVTAVPGRLPVMTMIPDVDCLLWAIGRVPNTKDLSLNKLGIQTDDKGHIIVDEFQNTNVKGIYA 328 (478)
T ss_dssp EEEEEEEECSSSEEEEEEECCTTSCCEEEEEEEESEEEECSCEEESCTTSCGGGGTCCBCTTCCBCCCTTCBCSSTTEEE
T ss_pred CEEEEEEEcCCCcEEEEEEccCCCCcccceEEEcCEEEEeeccccCCCCCCchhcCCeeCCCCCEeeCCCcccCCCCEEE
Confidence 999999876555 455554322222 3789999999999999999877688899999999999999999999999999
Q ss_pred ecccCCCCCchhHHHHHHHHHHHHHcCC--CCCCCCCCCceEEEcCCCeeeecCCHHHHHHcC--CCEEEEEEecCcccc
Q 011787 352 IGDVIPGPMLAHKAEEDGVACVEFLAGK--HGHVDYDKVPGVVYTHPEVASVGKTEEQVKELG--VEYRVGKFPFLANSR 427 (477)
Q Consensus 352 ~GD~~~~~~~~~~A~~~g~~aa~~i~~~--~~~~~~~~~p~~~~~~~~~~~~G~~~~~~~~~~--~~~~~~~~~~~~~~~ 427 (477)
+|||++.|.+++.|..||++||+||++. ....++..+|+++|++|+++++|+||+||++.+ .++.+...++....+
T Consensus 329 ~GD~~~~~~~~~~A~~~g~~aa~~i~~~~~~~~~~~~~~p~~~~~~p~~a~vGlte~~a~~~~~~~~~~~~~~~~~~~~~ 408 (478)
T 3dk9_A 329 VGDVCGKALLTPVAIAAGRKLAHRLFEYKEDSKLDYNNIPTVVFSHPPIGTVGLTEDEAIHKYGIENVKTYSTSFTPMYH 408 (478)
T ss_dssp CGGGGCSSCCHHHHHHHHHHHHHHHHSCCTTCCCCCTTCCEEECCSSCEEEEECCHHHHHHHHCGGGEEEEEEEECCGGG
T ss_pred EEecCCCCccHhHHHHHHHHHHHHHcCCCCcccCCCCCCCeEEECCCceEEeeCCHHHHHhhCCCccEEEEEeecCcchh
Confidence 9999999999999999999999999986 345688999999999999999999999999875 567777778888888
Q ss_pred chhcCCCceEEEEEEECCCCeEEEEEEEcCChHHHHHHHHHHhcCC
Q 011787 428 AKAIDDAEGIVKILAEKETDKILGVHIMAPNAGELIHEAAMATHDK 473 (477)
Q Consensus 428 ~~~~~~~~~~~k~~~~~~~~~i~G~~~~g~~~~~~~~~~~~~~~~~ 473 (477)
+...++++|++|+++|+++++|||+|++|++|.|+|+.+++||.++
T Consensus 409 ~~~~~~~~g~~k~i~~~~~~~ilG~~~~g~~a~e~i~~~~~ai~~~ 454 (478)
T 3dk9_A 409 AVTKRKTKCVMKMVCANKEEKVVGIHMQGLGCDEMLQGFAVAVKMG 454 (478)
T ss_dssp GGCSSCCCEEEEEEEETTTTEEEEEEEESTTHHHHHHHHHHHHHTT
T ss_pred hhhcCCCcEEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHCC
Confidence 8777788999999999999999999999999999999999999854
No 13
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=100.00 E-value=1.5e-65 Score=516.91 Aligned_cols=417 Identities=26% Similarity=0.457 Sum_probs=366.7
Q ss_pred CCCcEEEECCChHHHHHHHHHHHCCCeEEEEecCCCCCceeeccCccCchhhhhhhHHHHHHHhhhhhCCccccccccCh
Q 011787 42 DENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSVEVDL 121 (477)
Q Consensus 42 ~~~dvvIIGgG~AGl~aA~~l~~~g~~V~lie~~~~~GG~~~~~~~~p~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 121 (477)
.++||+|||||+||++||..|++.|++|+||||++.+||+|.+.+|+|++.++.....+....... . ....++|
T Consensus 3 ~~~DVvVIGgG~aGl~aA~~l~~~G~~V~liEk~~~~GG~~~~~gciPsk~l~~~a~~~~~~~~~~-~-----~~~~~~~ 76 (466)
T 3l8k_A 3 LKYDVVVIGAGGAGYHGAFRLAKAKYNVLMADPKGELGGNCLYSGCVPSKTVREVIQTAWRLTNIA-N-----VKIPLDF 76 (466)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEECTTSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHHH-C-----SCCCCCH
T ss_pred ccceEEEECCCHHHHHHHHHHHhCCCeEEEEECCCCCCCcccccCCCchHHHHHHHHHHHHHHhcc-c-----CCCCcCH
Confidence 358999999999999999999999999999998899999999999999999888877766554332 1 2346789
Q ss_pred HHHHHHHHHHHHHHH--HHHHHHhhhCCeEEEEeEEEEecCCEEEEEecCCceEEEEecEEEEccCCCCCCCCCCccCCc
Q 011787 122 PAMMAQKDKAVSNLT--RGIEGLFKKNKVTYVKGYGKFISPSEVSVDTIEGGNTVVKGKNIIIATGSDVKSLPGITIDEK 199 (477)
Q Consensus 122 ~~~~~~~~~~~~~~~--~~~~~~~~~~~v~~~~~~~~~~~~~~~~v~~~~g~~~~i~~d~lvlAtG~~~~~~~g~~~~~~ 199 (477)
..+..+.....+ +. ..+...+++.+++++.+++.+++.+.+.|.+.+|...++.||+||||||++|..++..+.+
T Consensus 77 ~~~~~~~~~~~~-l~~~~~~~~~~~~~~v~~~~g~v~~id~~~~~V~~~~g~~~~~~~d~lviAtG~~p~~p~i~G~~-- 153 (466)
T 3l8k_A 77 STVQDRKDYVQE-LRFKQHKRNMSQYETLTFYKGYVKIKDPTHVIVKTDEGKEIEAETRYMIIASGAETAKLRLPGVE-- 153 (466)
T ss_dssp HHHHHHHHHHHH-HHHHHHHHHHTTCTTEEEESEEEEEEETTEEEEEETTSCEEEEEEEEEEECCCEEECCCCCTTGG--
T ss_pred HHHHHHHHhhee-ccccchHHHHHHhCCCEEEEeEEEEecCCeEEEEcCCCcEEEEecCEEEECCCCCccCCCCCCcc--
Confidence 999888888777 76 7777888889999999999999999999998887333499999999999988544322222
Q ss_pred eEecchhhh----cccCCCCeeEEEcccHHHHHHHHHHHHcCCcEEEEEeCCCcCCCC-CHHHHHHHHHHHHhcCcEEEe
Q 011787 200 RIVSSTGAL----ALNEVPKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIVPSM-DGEIRKQFQRSLEKQKMKFML 274 (477)
Q Consensus 200 ~~~~~~~~~----~~~~~~~~v~IiG~G~~g~e~a~~l~~~g~~Vtli~~~~~~~~~~-~~~~~~~~~~~l~~~gv~~~~ 274 (477)
.+++..++. .+...+++++|||+|++|+|+|..|++.|.+|+++++.+++++.+ ++++.+.+.+.++ |++++
T Consensus 154 ~~~t~~~~~~~~~~l~~~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~~d~~~~~~l~~~l~---v~i~~ 230 (466)
T 3l8k_A 154 YCLTSDDIFGYKTSFRKLPQDMVIIGAGYIGLEIASIFRLMGVQTHIIEMLDRALITLEDQDIVNTLLSILK---LNIKF 230 (466)
T ss_dssp GSBCHHHHHSTTCSCCSCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCTTSCCHHHHHHHHHHHC---CCEEC
T ss_pred ceEeHHHHHHHHHHHhhCCCeEEEECCCHHHHHHHHHHHHcCCEEEEEEeCCcCCCCCCCHHHHHHHHhcCE---EEEEE
Confidence 578888888 666679999999999999999999999999999999999999988 9999999988886 99999
Q ss_pred CceEEEEEEcC-CeEEEEEeecCCCceEEEEcCEEEEeecCCCCCCCCCccccceeecCCCCeecCCCCCCCCCCeEEec
Q 011787 275 KTKVVGVDLSG-DGVKLTLEPAAGGEKTILEADVVLVSAGRTPFTAGLGLDKIGVETDKMGRIPVNERFATNIPGVYAIG 353 (477)
Q Consensus 275 ~~~v~~i~~~~-~~~~v~~~~~~~~~~~~i~~D~vi~a~G~~p~~~~l~~~~~gl~~~~~g~i~vd~~l~t~~~~vya~G 353 (477)
++++++++.++ +++.+.+.+ .+++..++++|.|++|+|++|++. +.++..|++++++| |.||+++||++|+|||+|
T Consensus 231 ~~~v~~i~~~~~~~v~v~~~~-~~G~~~~i~~D~vi~a~G~~p~~~-l~l~~~gl~~~~~G-i~vd~~~~t~~~~Iya~G 307 (466)
T 3l8k_A 231 NSPVTEVKKIKDDEYEVIYST-KDGSKKSIFTNSVVLAAGRRPVIP-EGAREIGLSISKTG-IVVDETMKTNIPNVFATG 307 (466)
T ss_dssp SCCEEEEEEEETTEEEEEECC-TTSCCEEEEESCEEECCCEEECCC-TTTGGGTCCBCSSS-BCCCTTCBCSSTTEEECG
T ss_pred CCEEEEEEEcCCCcEEEEEEe-cCCceEEEEcCEEEECcCCCcccc-cchhhcCceeCCCC-EeECCCccCCCCCEEEEE
Confidence 99999998876 777776642 123345899999999999999998 65788999999989 999999999999999999
Q ss_pred ccCCCCCchhHHHHHHHHHHHHHcCC---CCCCCCCCCceEEEcCCCeeeecCCHHHHHHcCCCEEEEEEecCccccchh
Q 011787 354 DVIPGPMLAHKAEEDGVACVEFLAGK---HGHVDYDKVPGVVYTHPEVASVGKTEEQVKELGVEYRVGKFPFLANSRAKA 430 (477)
Q Consensus 354 D~~~~~~~~~~A~~~g~~aa~~i~~~---~~~~~~~~~p~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 430 (477)
||++.|.+++.|..||++||.||++. ....++..+|+++|++|+++++|+||++|+..|+++++..+++....++..
T Consensus 308 D~~~~~~~~~~A~~~g~~aa~~i~~~~~~~~~~~~~~~p~~~~~~~~~a~vG~te~~a~~~g~~~~~~~~~~~~~~~~~~ 387 (466)
T 3l8k_A 308 DANGLAPYYHAAVRMSIAAANNIMANGMPVDYVDVKSIPVTIYTIPSLSYVGILPSKARKMGIEIVEAEYNMEEDVSAQI 387 (466)
T ss_dssp GGTCSCCSHHHHHHHHHHHHHHHHTTTSCCCCCCSTTSCEEECSSSCEEEEECCHHHHHHHTCCEEEEEEEGGGSHHHHH
T ss_pred ecCCCCccHhHHHHHHHHHHHHHhCCCCCccccCCCCCcEEEECCCCeEEecCCHHHHHhCCCCEEEEEEEcccChhhee
Confidence 99999999999999999999999975 345688899999999999999999999999999999999999999999888
Q ss_pred cCCCceEEEEEEECCCCeEEEEEEEcCChHHHHHHHHHHhcCC
Q 011787 431 IDDAEGIVKILAEKETDKILGVHIMAPNAGELIHEAAMATHDK 473 (477)
Q Consensus 431 ~~~~~~~~k~~~~~~~~~i~G~~~~g~~~~~~~~~~~~~~~~~ 473 (477)
.++++||+|+++|++|++|||+|++|+++.|+|+.+++||.++
T Consensus 388 ~~~~~g~~k~i~~~~~~~ilG~~~~g~~a~e~i~~~~~ai~~~ 430 (466)
T 3l8k_A 388 YGQKEGVLKLIFERGSMRLIGAWMIGVHSQYLINELGLAVAYG 430 (466)
T ss_dssp HTCCCCEEEEEEETTTCBEEEEEEESTTHHHHHHHHHHHHHTT
T ss_pred cCCCeEEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHCc
Confidence 8888999999999999999999999999999999999999854
No 14
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=100.00 E-value=7.4e-66 Score=521.77 Aligned_cols=423 Identities=26% Similarity=0.409 Sum_probs=370.1
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCeEEEEecCCCCCceeeccCccCchhhhhhhHHHHHHHhhhhhCCccccccccChH
Q 011787 43 ENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSVEVDLP 122 (477)
Q Consensus 43 ~~dvvIIGgG~AGl~aA~~l~~~g~~V~lie~~~~~GG~~~~~~~~p~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 122 (477)
+|||+||||||||++||.+|++.|++|+|||++ .+||+|.+.+|+|++.++.....++.... +..+|+......+++.
T Consensus 8 ~~DvvVIGgG~aGl~aA~~la~~G~~V~liE~~-~~GGtc~~~gciPsk~l~~~a~~~~~~~~-~~~~g~~~~~~~~~~~ 85 (492)
T 3ic9_A 8 NVDVAIIGTGTAGMGAYRAAKKHTDKVVLIEGG-AYGTTCARVGCMPSKLLIAAADASYHASQ-TDLFGIQVDRISVNGK 85 (492)
T ss_dssp EEEEEEECCSHHHHHHHHHHHTTCSCEEEEESS-CSSCHHHHHSHHHHHHHHHHHHHHHHHTC-GGGGTEECSEEEECHH
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCcEEEEeCC-CCCCcccccChhcCHHHHHHHHHHHHHhh-hhhcCcCCCCCccCHH
Confidence 589999999999999999999999999999995 69999999999999999888877665543 4667776555678898
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhC-CeEEEEeEEEEecCCEEEEEecCCceEEEEecEEEEccCCCCCCCCCCccCCceE
Q 011787 123 AMMAQKDKAVSNLTRGIEGLFKKN-KVTYVKGYGKFISPSEVSVDTIEGGNTVVKGKNIIIATGSDVKSLPGITIDEKRI 201 (477)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~~-~v~~~~~~~~~~~~~~~~v~~~~g~~~~i~~d~lvlAtG~~~~~~~g~~~~~~~~ 201 (477)
.+..+.......+...+....... +++++.+.+.+.+...+.+ .++ .++.||+||||||++|..++..+.....+
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~g~a~~~~~~~v~~--~~~--~~~~~d~lViATGs~p~~p~~~~~~~~~v 161 (492)
T 3ic9_A 86 AVMKRIQTERDRFVGFVVESVESFDEQDKIRGFAKFLDEHTLQV--DDH--SQVIAKRIVIATGSRPNYPEFLAAAGSRL 161 (492)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHSCGGGEEESCEEEEETTEEEE--TTT--EEEEEEEEEECCCEECCCCHHHHTTGGGE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcCeeEEEEEEEEecCCEEEE--cCC--cEEEeCEEEEccCCCCcCCCCCCccCCcE
Confidence 888887777666655554444443 5778999999988886665 355 78999999999999987655333345678
Q ss_pred ecchhhhcccCCCCeeEEEcccHHHHHHHHHHHHcCCcEEEEEeCCCcCCCCCHHHHHHHHHHHHhcCcEEEeCceEEEE
Q 011787 202 VSSTGALALNEVPKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIVPSMDGEIRKQFQRSLEKQKMKFMLKTKVVGV 281 (477)
Q Consensus 202 ~~~~~~~~~~~~~~~v~IiG~G~~g~e~a~~l~~~g~~Vtli~~~~~~~~~~~~~~~~~~~~~l~~~gv~~~~~~~v~~i 281 (477)
++++++..+...+++++|||+|++|+|+|..|++.|.+|+++++.+++++.+++++.+.+.+.|++. |++++++.++++
T Consensus 162 ~t~~~~~~~~~~~k~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~~~d~~~~~~l~~~l~~~-V~i~~~~~v~~i 240 (492)
T 3ic9_A 162 LTNDNLFELNDLPKSVAVFGPGVIGLELGQALSRLGVIVKVFGRSGSVANLQDEEMKRYAEKTFNEE-FYFDAKARVIST 240 (492)
T ss_dssp ECHHHHTTCSSCCSEEEEESSCHHHHHHHHHHHHTTCEEEEECCTTCCTTCCCHHHHHHHHHHHHTT-SEEETTCEEEEE
T ss_pred EcHHHHhhhhhcCCeEEEECCCHHHHHHHHHHHHcCCeEEEEEECCcccccCCHHHHHHHHHHHhhC-cEEEECCEEEEE
Confidence 9999999888899999999999999999999999999999999999999999999999999999988 999999999999
Q ss_pred EEcCCeEEEEEeecCCCceEEEEcCEEEEeecCCCCCCCCCccccceeecCCCCeecC-CCCCCCCCCeEEecccCCCCC
Q 011787 282 DLSGDGVKLTLEPAAGGEKTILEADVVLVSAGRTPFTAGLGLDKIGVETDKMGRIPVN-ERFATNIPGVYAIGDVIPGPM 360 (477)
Q Consensus 282 ~~~~~~~~v~~~~~~~~~~~~i~~D~vi~a~G~~p~~~~l~~~~~gl~~~~~g~i~vd-~~l~t~~~~vya~GD~~~~~~ 360 (477)
+.+++++.+++.+ .+++..++++|.|++|+|++|+++.+.++.+|++++++|+|.|| +++||+.|+|||+|||++.+.
T Consensus 241 ~~~~~~v~v~~~~-~~G~~~~i~~D~Vi~a~G~~p~~~~l~l~~~gl~~~~~G~i~vd~~~~~t~~~~IyA~GD~~~~~~ 319 (492)
T 3ic9_A 241 IEKEDAVEVIYFD-KSGQKTTESFQYVLAATGRKANVDKLGLENTSIELDKKNSPLFDELTLQTSVDHIFVAGDANNTLT 319 (492)
T ss_dssp EECSSSEEEEEEC-TTCCEEEEEESEEEECSCCEESCSSSCGGGSCCCBCTTCCBCCCTTTCBCSSTTEEECGGGGTSSC
T ss_pred EEcCCEEEEEEEe-CCCceEEEECCEEEEeeCCccCCCCCChhhcCCEECCCCCEeECcccccCCCCCEEEEEecCCCCc
Confidence 9887777777642 22333789999999999999999987788999999999999999 899999999999999999999
Q ss_pred chhHHHHHHHHHHHHHcCCC--CCCCCCCCceEEEcCCCeeeecCCHHHHHHc-----CCCEEEEEEecCccccchhcCC
Q 011787 361 LAHKAEEDGVACVEFLAGKH--GHVDYDKVPGVVYTHPEVASVGKTEEQVKEL-----GVEYRVGKFPFLANSRAKAIDD 433 (477)
Q Consensus 361 ~~~~A~~~g~~aa~~i~~~~--~~~~~~~~p~~~~~~~~~~~~G~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~ 433 (477)
+++.|..||++||.||++.. ...++..+|+++|++|+++++|+||+||++. +++|.+..+++....++.+.++
T Consensus 320 ~~~~A~~~g~~aa~~i~~~~~~~~~~~~~~p~~~~~~p~~a~vGlte~~a~~~~g~~~g~~~~~~~~~~~~~~~a~~~~~ 399 (492)
T 3ic9_A 320 LLHEAADDGKVAGTNAGAYPVIAQGQRRAPLSVVFTEPQVASVGLSLRQIEDLYADQDAANYVVGQVSFEGQGRSRVMGK 399 (492)
T ss_dssp SHHHHHHHHHHHHHHHHHTTSCCEECCCCCEEEECSSSEEEEEESCHHHHHHHCSCSSSCCEEEEEEEGGGCHHHHHTTC
T ss_pred cHHHHHHHHHHHHHHHcCCCCCcccCCCCCcEEEECCCCeEEecCCHHHHHhccCccCCccEEEEEEEeccchhhhhcCC
Confidence 99999999999999999732 3467888999999999999999999999988 3789999999999999998888
Q ss_pred CceEEEEEEECCCCeEEEEEEEcCChHHHHHHHHHHhcCC
Q 011787 434 AEGIVKILAEKETDKILGVHIMAPNAGELIHEAAMATHDK 473 (477)
Q Consensus 434 ~~~~~k~~~~~~~~~i~G~~~~g~~~~~~~~~~~~~~~~~ 473 (477)
+.+++|+++|++|++|||+|++|+++.|+|+.+++||.++
T Consensus 400 ~~g~~kli~~~~~~~ilG~~~~g~~a~e~i~~~~~ai~~~ 439 (492)
T 3ic9_A 400 NKGLLNVYADRTSGEFLGAEMFGPAAEHIGHLLAWARQQQ 439 (492)
T ss_dssp CCCEEEEEEETTTCBEEEEEEEETTHHHHHHHHHHHHHTT
T ss_pred CcEEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHCC
Confidence 8999999999999999999999999999999999999854
No 15
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=100.00 E-value=3.9e-65 Score=519.47 Aligned_cols=432 Identities=28% Similarity=0.459 Sum_probs=365.1
Q ss_pred CCCCCCcEEEECCChHHHHHHHHHHHCCCeEEEEecCC--------CCCceeeccCccCchhhhhhhHHHHHHHhhhhhC
Q 011787 39 SASDENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRG--------ALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASH 110 (477)
Q Consensus 39 ~~~~~~dvvIIGgG~AGl~aA~~l~~~g~~V~lie~~~--------~~GG~~~~~~~~p~~~l~~~~~~~~~~~~~~~~~ 110 (477)
+++.+|||+||||||||++||..|++.|++|+|||+++ .+||+|.+.+|+|++.++.....+... ..+..+
T Consensus 28 ~~~~~~DVvVIGgGpaGl~aA~~la~~G~~V~liEk~~~~~~~~~~~~GGtc~~~GciPsk~l~~~~~~~~~~-~~~~~~ 106 (519)
T 3qfa_A 28 PKSYDYDLIIIGGGSGGLAAAKEAAQYGKKVMVLDFVTPTPLGTRWGLGGTCVNVGCIPKKLMHQAALLGQAL-QDSRNY 106 (519)
T ss_dssp CSSCSEEEEEECCSHHHHHHHHHHHHTTCCEEEECCCCCCTTCCCCCTTCHHHHHSHHHHHHHHHHHHHHHHH-HHHHHT
T ss_pred CcCCCCCEEEECCCHHHHHHHHHHHhCCCeEEEEeccCccccccCCCcccccCCcCccchHHHHHHHHHHHHH-HHHHhc
Confidence 34557999999999999999999999999999999854 799999999999999887776655543 445677
Q ss_pred Cccccc-cccChHHHHHHHHHHHHHHHHHHHHHhhhCCeEEEEeEEEEecCCEEEEEecCCceEEEEecEEEEccCCCCC
Q 011787 111 GVKFSS-VEVDLPAMMAQKDKAVSNLTRGIEGLFKKNKVTYVKGYGKFISPSEVSVDTIEGGNTVVKGKNIIIATGSDVK 189 (477)
Q Consensus 111 g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~v~~~~g~~~~i~~d~lvlAtG~~~~ 189 (477)
|+.... ..++|..+..+.+.....+...+...++..+++++.+.+.+++++.+.|.+.+|+..++.||+||||||++|.
T Consensus 107 g~~~~~~~~~d~~~~~~~~~~~~~~l~~~~~~~~~~~gV~~i~g~a~~~d~~~v~v~~~~g~~~~i~~d~lViATGs~p~ 186 (519)
T 3qfa_A 107 GWKVEETVKHDWDRMIEAVQNHIGSLNWGYRVALREKKVVYENAYGQFIGPHRIKATNNKGKEKIYSAERFLIATGERPR 186 (519)
T ss_dssp TBCCCSSCCBCHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEECSEEEEEETTEEEEECTTCCCCEEEEEEEEECCCEEEC
T ss_pred CcccCCcCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEEEeeCCEEEEEcCCCCEEEEECCEEEEECCCCcC
Confidence 877643 5789999999999988888888888888899999999999999999999888775568999999999999886
Q ss_pred CCCCCccCCceEecchhhhcccCCCCeeEEEcccHHHHHHHHHHHHcCCcEEEEEeCCCcCCCCCHHHHHHHHHHHHhcC
Q 011787 190 SLPGITIDEKRIVSSTGALALNEVPKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIVPSMDGEIRKQFQRSLEKQK 269 (477)
Q Consensus 190 ~~~g~~~~~~~~~~~~~~~~~~~~~~~v~IiG~G~~g~e~a~~l~~~g~~Vtli~~~~~~~~~~~~~~~~~~~~~l~~~g 269 (477)
.++..+ ....+++.+++..+...+++++|||+|++|+|+|..|++.|.+|+++++. .+++.+|+++.+.+.+.|++.|
T Consensus 187 ~p~i~G-~~~~~~t~~~~~~l~~~~~~vvVIGgG~ig~E~A~~l~~~G~~Vtlv~~~-~~l~~~d~~~~~~~~~~l~~~G 264 (519)
T 3qfa_A 187 YLGIPG-DKEYCISSDDLFSLPYCPGKTLVVGASYVALECAGFLAGIGLDVTVMVRS-ILLRGFDQDMANKIGEHMEEHG 264 (519)
T ss_dssp CCCCTT-HHHHCBCHHHHTTCSSCCCSEEEECCSHHHHHHHHHHHHTTCCEEEEESS-CSSTTSCHHHHHHHHHHHHHTT
T ss_pred CCCCCC-ccCceEcHHHHhhhhhcCCeEEEECCcHHHHHHHHHHHHcCCeEEEEecc-cccccCCHHHHHHHHHHHHHCC
Confidence 443211 12346788888888888999999999999999999999999999999984 6888999999999999999999
Q ss_pred cEEEeCceEEEEEEcC----CeEEEEEeecCCCceEEEEcCEEEEeecCCCCCCCCCccccceeec-CCCCeecCCCCCC
Q 011787 270 MKFMLKTKVVGVDLSG----DGVKLTLEPAAGGEKTILEADVVLVSAGRTPFTAGLGLDKIGVETD-KMGRIPVNERFAT 344 (477)
Q Consensus 270 v~~~~~~~v~~i~~~~----~~~~v~~~~~~~~~~~~i~~D~vi~a~G~~p~~~~l~~~~~gl~~~-~~g~i~vd~~l~t 344 (477)
|++++++.++++...+ +.+.+++.....+...++++|.|++|+|++||++.+.++.+|++++ ++|+|.||+++||
T Consensus 265 V~v~~~~~v~~v~~~~~~~~~~~~v~~~~~~g~~~~~~~~D~vi~a~G~~p~~~~l~l~~~gl~~~~~~G~I~Vd~~~~T 344 (519)
T 3qfa_A 265 IKFIRQFVPIKVEQIEAGTPGRLRVVAQSTNSEEIIEGEYNTVMLAIGRDACTRKIGLETVGVKINEKTGKIPVTDEEQT 344 (519)
T ss_dssp CEEEESEEEEEEEEEECCTTCEEEEEEEESSSSCEEEEEESEEEECSCEEESCSSSCSTTTTCCCCTTTCCBCCCTTSBC
T ss_pred CEEEeCCeEEEEEEccCCCCceEEEEEEECCCcEEEEEECCEEEEecCCcccCCCCChhhcCcEEcCCCCeEeeCCCCcc
Confidence 9999999888876533 4455555432222224689999999999999999877888999998 5799999999999
Q ss_pred CCCCeEEecccC-CCCCchhHHHHHHHHHHHHHcCCC-CCCCCCCCceEEEcCCCeeeecCCHHHHHHcC--CCEEEEEE
Q 011787 345 NIPGVYAIGDVI-PGPMLAHKAEEDGVACVEFLAGKH-GHVDYDKVPGVVYTHPEVASVGKTEEQVKELG--VEYRVGKF 420 (477)
Q Consensus 345 ~~~~vya~GD~~-~~~~~~~~A~~~g~~aa~~i~~~~-~~~~~~~~p~~~~~~~~~~~~G~~~~~~~~~~--~~~~~~~~ 420 (477)
++|+|||+|||+ +.+.+++.|..||++||+||++.. ...++..+|+++|++|+++++|+||+||++.+ ..+.+...
T Consensus 345 s~~~IyA~GD~~~g~~~~~~~A~~~g~~aa~~i~g~~~~~~~~~~~p~~~~~~p~~a~vGlte~~a~~~~~~~~~~~~~~ 424 (519)
T 3qfa_A 345 NVPYIYAIGDILEDKVELTPVAIQAGRLLAQRLYAGSTVKCDYENVPTTVFTPLEYGACGLSEEKAVEKFGEENIEVYHS 424 (519)
T ss_dssp SSTTEEECGGGBSSSCCCHHHHHHHHHHHHHHHHSCCCCCCCCTTCCEEECSSSCEEEEECCHHHHHHHHCGGGEEEEEE
T ss_pred CCCCEEEEEeccCCCCccHHHHHHHHHHHHHHHcCCCCccCCCCcCcEEEECCCceEEecCCHHHHHhhCCCCCEEEEEE
Confidence 999999999998 678899999999999999999765 34678899999999999999999999998762 35776666
Q ss_pred ecCccccchhc-CCCceEEEEEEEC-CCCeEEEEEEEcCChHHHHHHHHHHhcCC
Q 011787 421 PFLANSRAKAI-DDAEGIVKILAEK-ETDKILGVHIMAPNAGELIHEAAMATHDK 473 (477)
Q Consensus 421 ~~~~~~~~~~~-~~~~~~~k~~~~~-~~~~i~G~~~~g~~~~~~~~~~~~~~~~~ 473 (477)
++....++... .++++|+|+++|+ +|++|||+|++|++|.|+|+.+++||.++
T Consensus 425 ~~~~~~~~~~~~~~~~g~~Kli~~~~~~~~ilGa~i~g~~a~e~i~~~~~ai~~~ 479 (519)
T 3qfa_A 425 YFWPLEWTIPSRDNNKCYAKIICNTKDNERVVGFHVLGPNAGEVTQGFAAALKCG 479 (519)
T ss_dssp EECCHHHHTTTCCTTTEEEEEEEETTTTCEEEEEEEESTTHHHHHHHHHHHHHTT
T ss_pred eccchhhhhhccCCCcEEEEEEEecCCCCEEEEEEEECCCHHHHHHHHHHHHHCC
Confidence 66544444333 2468999999997 58999999999999999999999999864
No 16
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=100.00 E-value=2e-65 Score=515.94 Aligned_cols=419 Identities=26% Similarity=0.422 Sum_probs=372.8
Q ss_pred CCCcEEEECCChHHHHHHHHHHHCCCeEEEEecCCCCCceeeccCccCchhhhhhhHHHHHHHhhhhhCCccccccccCh
Q 011787 42 DENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSVEVDL 121 (477)
Q Consensus 42 ~~~dvvIIGgG~AGl~aA~~l~~~g~~V~lie~~~~~GG~~~~~~~~p~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 121 (477)
.++||+|||||++|++||..|++.|++|+|||+ +.+||+|.+.+|+|++.++.......... .+..+++......++|
T Consensus 4 ~~~DVvVIGaG~aGl~aA~~la~~G~~V~liEk-~~~GG~~~~~gcip~k~l~~~~~~~~~~~-~~~~~g~~~~~~~~~~ 81 (463)
T 4dna_A 4 FDYDLFVIGGGSGGVRSGRLAAALGKKVAIAEE-FRYGGTCVIRGCVPKKLYVYASQFAEHFE-DAAGFGWTVGESRFDW 81 (463)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHTTTCCEEEEES-SCTTHHHHHHSHHHHHHHHHHHHHHHHHH-HGGGGTEEECCCEECH
T ss_pred CCCcEEEECcCHHHHHHHHHHHhCCCEEEEEeC-CCCCCcccccCchhhHHHHHHHHHHHHHH-HHHhcCcccCCCCcCH
Confidence 368999999999999999999999999999999 88999999999999999888777666554 3567777766678899
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhCCeEEEEeEEEEecCCEEEEEecCCceEEEEecEEEEccCCCCC-CCCCCccCCce
Q 011787 122 PAMMAQKDKAVSNLTRGIEGLFKKNKVTYVKGYGKFISPSEVSVDTIEGGNTVVKGKNIIIATGSDVK-SLPGITIDEKR 200 (477)
Q Consensus 122 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~v~~~~g~~~~i~~d~lvlAtG~~~~-~~~g~~~~~~~ 200 (477)
..+..+.......+...+...+++.+++++.+.+.+++...+.+. .++ ..+.||++|+|||++|. .++..+. ..
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~g~~~~i~~~~v~~~-~~~--~~~~~d~lviAtG~~p~~~p~i~G~--~~ 156 (463)
T 4dna_A 82 AKLVAAKEQEIARLEGLYRKGLANAGAEILDTRAELAGPNTVKLL-ASG--KTVTAERIVIAVGGHPSPHDALPGH--EL 156 (463)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTCEEEESCEEESSSSEEEET-TTT--EEEEEEEEEECCCEEECCCTTSTTG--GG
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEEEeeCCEEEEe-cCC--eEEEeCEEEEecCCCcccCCCCCCc--cc
Confidence 999999998888888888888888899999999999988766553 344 78999999999999887 4332111 24
Q ss_pred EecchhhhcccCCCCeeEEEcccHHHHHHHHHHHHcCCcEEEEEeCCCcCCCCCHHHHHHHHHHHHhcCcEEEeCceEEE
Q 011787 201 IVSSTGALALNEVPKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIVPSMDGEIRKQFQRSLEKQKMKFMLKTKVVG 280 (477)
Q Consensus 201 ~~~~~~~~~~~~~~~~v~IiG~G~~g~e~a~~l~~~g~~Vtli~~~~~~~~~~~~~~~~~~~~~l~~~gv~~~~~~~v~~ 280 (477)
+++.+++..+...+++++|||+|++|+|+|..+++.|.+|+++++.+++++.+++++.+.+.+.+++.||++++++.|++
T Consensus 157 ~~~~~~~~~~~~~~~~v~ViGgG~~g~e~A~~l~~~g~~Vt~v~~~~~~l~~~~~~~~~~l~~~l~~~Gv~i~~~~~v~~ 236 (463)
T 4dna_A 157 CITSNEAFDLPALPESILIAGGGYIAVEFANIFHGLGVKTTLIYRGKEILSRFDQDMRRGLHAAMEEKGIRILCEDIIQS 236 (463)
T ss_dssp CBCHHHHTTCSSCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSTTSCHHHHHHHHHHHHHTTCEEECSCCEEE
T ss_pred cccHHHHhhhhcCCCeEEEECCCHHHHHHHHHHHHcCCeEEEEEcCCccccccCHHHHHHHHHHHHHCCCEEECCCEEEE
Confidence 67788888888889999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEcCCe-EEEE-EeecCCCceEEEEcCEEEEeecCCCCCCCCCccccceeecCCCCeecCCCCCCCCCCeEEecccCCC
Q 011787 281 VDLSGDG-VKLT-LEPAAGGEKTILEADVVLVSAGRTPFTAGLGLDKIGVETDKMGRIPVNERFATNIPGVYAIGDVIPG 358 (477)
Q Consensus 281 i~~~~~~-~~v~-~~~~~~~~~~~i~~D~vi~a~G~~p~~~~l~~~~~gl~~~~~g~i~vd~~l~t~~~~vya~GD~~~~ 358 (477)
++.++++ +.++ +. +++ +++|.|++|+|++|++..+.++..|++++++|+|.||+++||++|+|||+|||++.
T Consensus 237 i~~~~~~~~~v~~~~-----~g~-i~aD~Vv~a~G~~p~~~~l~l~~~g~~~~~~G~i~vd~~~~t~~~~iya~GD~~~~ 310 (463)
T 4dna_A 237 VSADADGRRVATTMK-----HGE-IVADQVMLALGRMPNTNGLGLEAAGVRTNELGAIIVDAFSRTSTPGIYALGDVTDR 310 (463)
T ss_dssp EEECTTSCEEEEESS-----SCE-EEESEEEECSCEEESCTTSSTGGGTCCBCTTSCBCCCTTCBCSSTTEEECSGGGSS
T ss_pred EEEcCCCEEEEEEcC-----CCe-EEeCEEEEeeCcccCCCCCCccccCceECCCCCEeECcCCCCCCCCEEEEEecCCC
Confidence 9887554 4555 43 445 99999999999999999877788999999999999999999999999999999999
Q ss_pred CCchhHHHHHHHHHHHHHcCCC-CCCCCCCCceEEEcCCCeeeecCCHHHHHHcCCCEEEEEEecCccccchhcCCCceE
Q 011787 359 PMLAHKAEEDGVACVEFLAGKH-GHVDYDKVPGVVYTHPEVASVGKTEEQVKELGVEYRVGKFPFLANSRAKAIDDAEGI 437 (477)
Q Consensus 359 ~~~~~~A~~~g~~aa~~i~~~~-~~~~~~~~p~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 437 (477)
+.+++.|..||+++|+||++.. ...++..+|+++|++|+++++|+||+||++.|.++.+..+++....++...++++++
T Consensus 311 ~~~~~~A~~~g~~aa~~i~g~~~~~~~~~~~p~~~~~~p~~a~vG~te~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 390 (463)
T 4dna_A 311 VQLTPVAIHEAMCFIETEYKNNPTSPDHDLIATAVFSQPEIGTVGITEEEAARKFQEIEVYRAEFRPMKATLSGRKEKTI 390 (463)
T ss_dssp CCCHHHHHHHHHHHHHHHHSSCCCCCCCSCCCEEECSSSCEEEEECCHHHHHHHSSEEEEEEEEECCTTHHHHCCCCCEE
T ss_pred CCChHHHHHHHHHHHHHHcCCCCcccCCCCCCEEEECCCCeEEecCCHHHHHHcCCCeEEEEEeccccchhhcCCCceEE
Confidence 9999999999999999999864 346788999999999999999999999999999999999999988888887888999
Q ss_pred EEEEEECCCCeEEEEEEEcCChHHHHHHHHHHhcCC
Q 011787 438 VKILAEKETDKILGVHIMAPNAGELIHEAAMATHDK 473 (477)
Q Consensus 438 ~k~~~~~~~~~i~G~~~~g~~~~~~~~~~~~~~~~~ 473 (477)
+|+++|++|++|||+|++|+++.|+|+.+++||.++
T Consensus 391 ~k~~~~~~~~~ilG~~~~g~~a~~~i~~~~~ai~~~ 426 (463)
T 4dna_A 391 MKLVVNAADRKVVGAHILGHDAGEMAQLLGISLRAG 426 (463)
T ss_dssp EEEEEETTTCBEEEEEEESTTHHHHHHHHHHHHHTT
T ss_pred EEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHCC
Confidence 999999999999999999999999999999999854
No 17
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=100.00 E-value=4.2e-65 Score=518.11 Aligned_cols=423 Identities=27% Similarity=0.463 Sum_probs=372.1
Q ss_pred CCcEEEECCChHHHHHHHHHHHC---CCeEEEEecCCCCCceeeccCccCchhhhhhhHHHHHHHhhhhhCCcc--cccc
Q 011787 43 ENDVVVIGGGPGGYVAAIKAAQL---GLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVK--FSSV 117 (477)
Q Consensus 43 ~~dvvIIGgG~AGl~aA~~l~~~---g~~V~lie~~~~~GG~~~~~~~~p~~~l~~~~~~~~~~~~~~~~~g~~--~~~~ 117 (477)
++||+|||||+||++||.+|++. |++|+|||+++ +||+|.+.+|+|++.++.....++... .+..+|+. ....
T Consensus 2 ~~dVvIIGgG~aGl~aA~~l~~~~~~G~~V~liE~~~-~GG~~~~~g~~psk~l~~~a~~~~~~~-~~~~~g~~~~~~~~ 79 (499)
T 1xdi_A 2 VTRIVILGGGPAGYEAALVAATSHPETTQVTVIDCDG-IGGAAVLDDCVPSKTFIASTGLRTELR-RAPHLGFHIDFDDA 79 (499)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHCTTTEEEEEEESSC-TTHHHHHTSHHHHHHHHHHHHHHHHHT-TTTTTTBC------
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCCcCEEEEEeCCC-cCCcccCcCccchHHHHHHHHHHHHHH-HHHhCCCccccCCC
Confidence 48999999999999999999999 99999999977 999999999999998887776665433 34556665 3445
Q ss_pred ccChHHHHHHHHHHHHHHHHHHHHHhhhCCeEEEEeEEEEecC------CEEEEEecCCceEEEEecEEEEccCCCCCCC
Q 011787 118 EVDLPAMMAQKDKAVSNLTRGIEGLFKKNKVTYVKGYGKFISP------SEVSVDTIEGGNTVVKGKNIIIATGSDVKSL 191 (477)
Q Consensus 118 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~------~~~~v~~~~g~~~~i~~d~lvlAtG~~~~~~ 191 (477)
..++..+..+..+....+...+..++++.+++++.+++.+++. +.+.|.+.+|+...+.||+||+|||++|..+
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~g~~~~i~~~~~~~~~~~~V~~~~g~~~~~~~d~lviATGs~p~~p 159 (499)
T 1xdi_A 80 KISLPQIHARVKTLAAAQSADITAQLLSMGVQVIAGRGELIDSTPGLARHRIKATAADGSTSEHEADVVLVATGASPRIL 159 (499)
T ss_dssp CBCHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEESEEEECCSSSCCSSEEEEEECTTSCEEEEEESEEEECCCEEECCC
T ss_pred ccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEEecCcccCCCCEEEEEeCCCcEEEEEeCEEEEcCCCCCCCC
Confidence 6789999988888888888888888888999999999888887 6677777666334799999999999988654
Q ss_pred CCCccCCceEecchhhhcccCCCCeeEEEcccHHHHHHHHHHHHcCCcEEEEEeCCCcCCCCCHHHHHHHHHHHHhcCcE
Q 011787 192 PGITIDEKRIVSSTGALALNEVPKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIVPSMDGEIRKQFQRSLEKQKMK 271 (477)
Q Consensus 192 ~g~~~~~~~~~~~~~~~~~~~~~~~v~IiG~G~~g~e~a~~l~~~g~~Vtli~~~~~~~~~~~~~~~~~~~~~l~~~gv~ 271 (477)
+..+.+...+++..+...+...+++++|||+|++|+|+|..+++.|.+|+++++.+++++.+++++.+.+.+.+++.||+
T Consensus 160 ~i~g~~~~~v~~~~~~~~~~~~~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~~~d~~~~~~l~~~l~~~GV~ 239 (499)
T 1xdi_A 160 PSAQPDGERILTWRQLYDLDALPDHLIVVGSGVTGAEFVDAYTELGVPVTVVASQDHVLPYEDADAALVLEESFAERGVR 239 (499)
T ss_dssp GGGCCCSSSEEEGGGGGGCSSCCSSEEEESCSHHHHHHHHHHHHTTCCEEEECSSSSSSCCSSHHHHHHHHHHHHHTTCE
T ss_pred CCCCCCcCcEEehhHhhhhhccCCeEEEECCCHHHHHHHHHHHHcCCeEEEEEcCCccccccCHHHHHHHHHHHHHCCCE
Confidence 43223344588888888888889999999999999999999999999999999999999999999999999999999999
Q ss_pred EEeCceEEEEEEcCCeEEEEEeecCCCceEEEEcCEEEEeecCCCCCCCCCccccceeecCCCCeecCCCCCCCCCCeEE
Q 011787 272 FMLKTKVVGVDLSGDGVKLTLEPAAGGEKTILEADVVLVSAGRTPFTAGLGLDKIGVETDKMGRIPVNERFATNIPGVYA 351 (477)
Q Consensus 272 ~~~~~~v~~i~~~~~~~~v~~~~~~~~~~~~i~~D~vi~a~G~~p~~~~l~~~~~gl~~~~~g~i~vd~~l~t~~~~vya 351 (477)
++++++|++++.+++++.+.+. +++++++|.||+|+|++||++.+.++++|++++++|+|.||+++||+.|+|||
T Consensus 240 i~~~~~V~~i~~~~~~v~v~~~-----~g~~i~aD~Vv~a~G~~p~~~~l~l~~~gl~~~~~G~i~Vd~~~~t~~~~IyA 314 (499)
T 1xdi_A 240 LFKNARAASVTRTGAGVLVTMT-----DGRTVEGSHALMTIGSVPNTSGLGLERVGIQLGRGNYLTVDRVSRTLATGIYA 314 (499)
T ss_dssp EETTCCEEEEEECSSSEEEEET-----TSCEEEESEEEECCCEEECCSSSCTTTTTCCCBTTTBCCCCSSSBCSSTTEEE
T ss_pred EEeCCEEEEEEEeCCEEEEEEC-----CCcEEEcCEEEECCCCCcCCCcCCchhcCceECCCCCEEECCCcccCCCCEEE
Confidence 9999999999887666666543 55789999999999999999876678889999988999999999999999999
Q ss_pred ecccCCCCCchhHHHHHHHHHHHHHcCC-CCCCCCCCCceEEEcCCCeeeecCCHHHHHHcCCCEEEEEEecCccccchh
Q 011787 352 IGDVIPGPMLAHKAEEDGVACVEFLAGK-HGHVDYDKVPGVVYTHPEVASVGKTEEQVKELGVEYRVGKFPFLANSRAKA 430 (477)
Q Consensus 352 ~GD~~~~~~~~~~A~~~g~~aa~~i~~~-~~~~~~~~~p~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 430 (477)
+|||++.+.+++.|..||++||+||++. ..++++..+|+++|++|+++++|+++++|+..|+++.+..+++....++..
T Consensus 315 ~GD~~~~~~l~~~A~~~g~~aa~~i~g~~~~~~~~~~~p~~~~~~~~~a~vG~~e~~a~~~g~~~~~~~~~~~~~~~~~~ 394 (499)
T 1xdi_A 315 AGDCTGLLPLASVAAMQGRIAMYHALGEGVSPIRLRTVAATVFTRPEIAAVGVPQSVIDAGSVAARTIMLPLRTNARAKM 394 (499)
T ss_dssp CSGGGTSCSCHHHHHHHHHHHHHHHTTCCCCCCCGGGCEEEECSSSEEEEEESCHHHHHHTSSCEEEEEEESTTSHHHHH
T ss_pred EeccCCCcccHHHHHHHHHHHHHHhcCCCCccCCCCCCcEEEEecCCceEeCCCHHHHHhCCCCEEEEEEecCcccceee
Confidence 9999999999999999999999999987 456778889999999999999999999999999999999999998888888
Q ss_pred cCCCceEEEEEEECCCCeEEEEEEEcCChHHHHHHHHHHhcC
Q 011787 431 IDDAEGIVKILAEKETDKILGVHIMAPNAGELIHEAAMATHD 472 (477)
Q Consensus 431 ~~~~~~~~k~~~~~~~~~i~G~~~~g~~~~~~~~~~~~~~~~ 472 (477)
.+++.+|+|+++|+++++|+|++++|+++.|+|+.+++||.+
T Consensus 395 ~~~~~g~~k~~~~~~~~~ilG~~~~g~~a~~~i~~~~~ai~~ 436 (499)
T 1xdi_A 395 SEMRHGFVKIFCRRSTGVVIGGVVVAPIASELILPIAVAVQN 436 (499)
T ss_dssp TTCSSCEEEEEEETTTCBEEEEEEEETTHHHHHHHHHHHHHH
T ss_pred cCCCceEEEEEEECCCCEEEEEEEECCchHHHHHHHHHHHHC
Confidence 778889999999988999999999999999999999999974
No 18
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=100.00 E-value=8.3e-65 Score=514.10 Aligned_cols=426 Identities=28% Similarity=0.456 Sum_probs=368.9
Q ss_pred CCCCCcEEEECCChHHHHHHHHHHH-CCCeEEEEe--------cCCCCCceeeccCccCchhhhhhhHHHHHHHhhhhhC
Q 011787 40 ASDENDVVVIGGGPGGYVAAIKAAQ-LGLKTTCIE--------KRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASH 110 (477)
Q Consensus 40 ~~~~~dvvIIGgG~AGl~aA~~l~~-~g~~V~lie--------~~~~~GG~~~~~~~~p~~~l~~~~~~~~~~~~~~~~~ 110 (477)
|+.++||+|||||+||++||.+|++ .|++|+||| +...+||+|.+.+|+|++.++.....++... ....+
T Consensus 4 M~~~~dvvVIGgG~aGl~aA~~la~~~G~~V~liE~~~~~~~~~~~~~GG~~~~~gciP~k~l~~~a~~~~~~~-~~~~~ 82 (495)
T 2wpf_A 4 MSKAFDLVVIGAGSGGLEAGWNAATLYGKRVAVVDVQTSHGPPFYAALGGTCVNVGCVPKKLMVTGAQYMDHLR-ESAGF 82 (495)
T ss_dssp CCEEEEEEEECCSHHHHHHHHHHHHHHCCCEEEEESCSSSBTTTBCBTTHHHHHHSHHHHHHHHHHHHHHHHHH-HHHTT
T ss_pred cccccCEEEECCChhHHHHHHHHHHhcCCeEEEEecccccccccCCCCCCeeecCCcchHHHHHHHHHHHHHHh-HHHhc
Confidence 4446899999999999999999999 999999999 3578999999999999999887776665544 35566
Q ss_pred Ccccccc--ccChHHHHHHHHHHHHHHHHHHHHHhhhC-CeEEEEeEEEEecCCEEEEEecCC----ceEEEEecEEEEc
Q 011787 111 GVKFSSV--EVDLPAMMAQKDKAVSNLTRGIEGLFKKN-KVTYVKGYGKFISPSEVSVDTIEG----GNTVVKGKNIIIA 183 (477)
Q Consensus 111 g~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~v~~~~~~~~~~~~~~~~v~~~~g----~~~~i~~d~lvlA 183 (477)
++..... .++|..+..+..+....+...+...+++. +++++.+++.+++.+.+.+...++ ....+.||+||||
T Consensus 83 g~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~gv~~~~g~~~~i~~~~v~v~~~~~~~~~~~~~~~~d~lViA 162 (495)
T 2wpf_A 83 GWEFDGSSVKANWKKLIAAKNEAVLDINKSYEGMFNDTEGLDFFLGWGSLESKNVVVVRETADPKSAVKERLQADHILLA 162 (495)
T ss_dssp TEECCGGGCEECHHHHHHHHHHHHHHHHHHHHHHHHHCTTEEEEESEEEEEETTEEEEESSSSTTSCEEEEEEEEEEEEC
T ss_pred CcccCCcccccCHHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEeEEEEeeCCEEEEeecCCccCCCCeEEEcCEEEEe
Confidence 7765544 68999999999988888888888888888 999999999999888777652111 0368999999999
Q ss_pred cCCCCCCCCCCccCCceEecchhhhcccCCCCeeEEEcccHHHHHHHHHHHHc---CCcEEEEEeCCCcCCCCCHHHHHH
Q 011787 184 TGSDVKSLPGITIDEKRIVSSTGALALNEVPKKLVVIGAGYIGLEMGSVWARL---GSEVTVVEFAADIVPSMDGEIRKQ 260 (477)
Q Consensus 184 tG~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~v~IiG~G~~g~e~a~~l~~~---g~~Vtli~~~~~~~~~~~~~~~~~ 260 (477)
||++|..++..+. ..+++++++..+...+++++|||+|++|+|+|..|++. |.+|+++++.+++++.+++++.+.
T Consensus 163 TGs~p~~p~i~G~--~~~~~~~~~~~~~~~~~~vvViGgG~ig~E~A~~l~~~~~~g~~Vtlv~~~~~~l~~~d~~~~~~ 240 (495)
T 2wpf_A 163 TGSWPQMPAIPGI--EHCISSNEAFYLPEPPRRVLTVGGGFISVEFAGIFNAYKPPGGKVTLCYRNNLILRGFDETIREE 240 (495)
T ss_dssp CCEEECCCCCTTG--GGCEEHHHHTTCSSCCSEEEEECSSHHHHHHHHHHHHHCCTTCEEEEEESSSSSCTTSCHHHHHH
T ss_pred CCCCcCCCCCCCc--cccccHHHHHhhhhcCCeEEEECCCHHHHHHHHHHHhhCCCCCeEEEEEcCCccccccCHHHHHH
Confidence 9998864331111 24678888888888899999999999999999999999 999999999999999999999999
Q ss_pred HHHHHHhcCcEEEeCceEEEEEEcCC-eEEEEEeecCCCceEEEEcCEEEEeecCCCCCCCCCccccceeecCCCCeecC
Q 011787 261 FQRSLEKQKMKFMLKTKVVGVDLSGD-GVKLTLEPAAGGEKTILEADVVLVSAGRTPFTAGLGLDKIGVETDKMGRIPVN 339 (477)
Q Consensus 261 ~~~~l~~~gv~~~~~~~v~~i~~~~~-~~~v~~~~~~~~~~~~i~~D~vi~a~G~~p~~~~l~~~~~gl~~~~~g~i~vd 339 (477)
+.+.++++||+++++++|++++.+++ .+.+++. +++++++|.||+|+|++||++.+.++.+|++++++|+|.||
T Consensus 241 l~~~l~~~GV~i~~~~~v~~i~~~~~~~~~v~~~-----~G~~i~~D~vv~a~G~~p~~~~L~l~~~gl~~~~~G~i~Vd 315 (495)
T 2wpf_A 241 VTKQLTANGIEIMTNENPAKVSLNTDGSKHVTFE-----SGKTLDVDVVMMAIGRIPRTNDLQLGNVGVKLTPKGGVQVD 315 (495)
T ss_dssp HHHHHHHTTCEEEESCCEEEEEECTTSCEEEEET-----TSCEEEESEEEECSCEEECCGGGTGGGTTCCBCTTSSBCCC
T ss_pred HHHHHHhCCCEEEeCCEEEEEEEcCCceEEEEEC-----CCcEEEcCEEEECCCCcccccccchhhcCccCCCCCCEEEC
Confidence 99999999999999999999987654 3566654 45689999999999999999865578889999988999999
Q ss_pred CCCCCCCCCeEEecccCCCCCchhHHHHHHHHHHHHHcCCC-CCCCCCCCceEEEcCCCeeeecCCHHHHHHcCCCEEEE
Q 011787 340 ERFATNIPGVYAIGDVIPGPMLAHKAEEDGVACVEFLAGKH-GHVDYDKVPGVVYTHPEVASVGKTEEQVKELGVEYRVG 418 (477)
Q Consensus 340 ~~l~t~~~~vya~GD~~~~~~~~~~A~~~g~~aa~~i~~~~-~~~~~~~~p~~~~~~~~~~~~G~~~~~~~~~~~~~~~~ 418 (477)
+++||+.|+|||+|||++.+.+++.|..||++||.||++.. ...++..+|+++|++|+++++|++|++++..+.++.+.
T Consensus 316 ~~~~t~~~~IyA~GD~~~~~~l~~~A~~~g~~aa~~i~g~~~~~~~~~~~p~~~~~~~~~a~vGl~e~~a~~~~~~~~v~ 395 (495)
T 2wpf_A 316 EFSRTNVPNIYAIGDITDRLMLTPVAINEGAALVDTVFGNKPRKTDHTRVASAVFSIPPIGTCGLIEEVAAKEFEKVAVY 395 (495)
T ss_dssp TTCBCSSTTEEECGGGGCSCCCHHHHHHHHHHHHHHHHSSCCCCCCCSSCEEEECCSSCEEEEECCHHHHHHHSSEEEEE
T ss_pred CCCccCCCCEEEEeccCCCccCHHHHHHHHHHHHHHhcCCCCCcCCCCCCCEEEECCCCeEEEeCCHHHHHhcCCCEEEE
Confidence 99999999999999999988899999999999999999853 44678889999999999999999999998888788888
Q ss_pred EEecCccccchhcCCCceE-EEEEEECCCCeEEEEEEEcCChHHHHHHHHHHhcCC
Q 011787 419 KFPFLANSRAKAIDDAEGI-VKILAEKETDKILGVHIMAPNAGELIHEAAMATHDK 473 (477)
Q Consensus 419 ~~~~~~~~~~~~~~~~~~~-~k~~~~~~~~~i~G~~~~g~~~~~~~~~~~~~~~~~ 473 (477)
..++....++...+++.+| +|+++|+++++|||+|++|+++.|+|+.+++||.++
T Consensus 396 ~~~~~~~~~~~~~~~~~~~~~klv~~~~~~~ilG~~~~g~~a~~~i~~~~~ai~~~ 451 (495)
T 2wpf_A 396 MSSFTPLMHNISGSKYKKFVAKIVTNHSDGTVLGVHLLGDGAPEIIQAVGVCLRLN 451 (495)
T ss_dssp EEEECCTHHHHHSCTTCCEEEEEEEETTTCBEEEEEEESTTHHHHHHHHHHHHHTT
T ss_pred EEecCchhhhhhcCCCcEEEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHCC
Confidence 8888877777766678899 999999999999999999999999999999999754
No 19
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=100.00 E-value=9.5e-65 Score=514.12 Aligned_cols=430 Identities=29% Similarity=0.410 Sum_probs=365.7
Q ss_pred CCCcEEEECCChHHHHHHHHHHHCCCeEEEEec--------CCCCCceeeccCccCchhhhhhhHHHHHHHhhhhhCCcc
Q 011787 42 DENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEK--------RGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVK 113 (477)
Q Consensus 42 ~~~dvvIIGgG~AGl~aA~~l~~~g~~V~lie~--------~~~~GG~~~~~~~~p~~~l~~~~~~~~~~~~~~~~~g~~ 113 (477)
.+|||+||||||||++||..|++.|++|+|||+ ...+||+|.+.+|+|++.++......... .....+|+.
T Consensus 5 ~~~DvvVIG~G~aGl~aA~~la~~G~~V~liEk~~~~~~~~~~~~GGtc~~~gciPsk~l~~~~~~~~~~-~~~~~~g~~ 83 (488)
T 3dgz_A 5 QSFDLLVIGGGSGGLACAKEAAQLGKKVAVADYVEPSPRGTKWGLGGTCVNVGCIPKKLMHQAALLGGMI-RDAHHYGWE 83 (488)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEECCCCCCTTSCCCCTTCHHHHHSHHHHHHHHHHHHHHHHH-HHHHHTTCC
T ss_pred CcCCEEEECCCHHHHHHHHHHHhCCCeEEEEEecccccccccCCcCCeecccCCcccHHHHHHHHHHHHH-HHHHhcCcc
Confidence 358999999999999999999999999999997 46799999999999999887777665544 335677876
Q ss_pred cc-ccccChHHHHHHHHHHHHHHHHHHHHHhhhCCeEEEEeEEEEecCCEEEEEecCCceEEEEecEEEEccCCCCCCCC
Q 011787 114 FS-SVEVDLPAMMAQKDKAVSNLTRGIEGLFKKNKVTYVKGYGKFISPSEVSVDTIEGGNTVVKGKNIIIATGSDVKSLP 192 (477)
Q Consensus 114 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~v~~~~g~~~~i~~d~lvlAtG~~~~~~~ 192 (477)
.. ...++|..+..+.......+...+...+++.+++++.+.+.+++++.+.+.+.+|...++.||+||||||++|..++
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~g~~~~~~~~~v~v~~~~g~~~~~~~d~lViATGs~p~~p~ 163 (488)
T 3dgz_A 84 VAQPVQHNWKTMAEAVQNHVKSLNWGHRVQLQDRKVKYFNIKASFVDEHTVRGVDKGGKATLLSAEHIVIATGGRPRYPT 163 (488)
T ss_dssp CCSSCCCCHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEECCEEEESSSSEEEEECTTSCEEEEEEEEEEECCCEEECCCS
T ss_pred cCCcCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEEEccCCeEEEEeCCCceEEEECCEEEEcCCCCCCCCC
Confidence 65 45789999999999988888888888888899999999999999999999888776678999999999999886443
Q ss_pred CCccCCceEecchhhhcccCCCCeeEEEcccHHHHHHHHHHHHcCCcEEEEEeCCCcCCCCCHHHHHHHHHHHHhcCcEE
Q 011787 193 GITIDEKRIVSSTGALALNEVPKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIVPSMDGEIRKQFQRSLEKQKMKF 272 (477)
Q Consensus 193 g~~~~~~~~~~~~~~~~~~~~~~~v~IiG~G~~g~e~a~~l~~~g~~Vtli~~~~~~~~~~~~~~~~~~~~~l~~~gv~~ 272 (477)
.++......++++++..+...+++++|||+|++|+|+|..|++.|.+|+++++. .+++.+|+++.+.+.+.++++||++
T Consensus 164 ~i~G~~~~~~~~~~~~~~~~~~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~-~~l~~~d~~~~~~l~~~l~~~gv~~ 242 (488)
T 3dgz_A 164 QVKGALEYGITSDDIFWLKESPGKTLVVGASYVALECAGFLTGIGLDTTVMMRS-IPLRGFDQQMSSLVTEHMESHGTQF 242 (488)
T ss_dssp SCBTHHHHCBCHHHHTTCSSCCCSEEEECCSHHHHHHHHHHHHTTCCEEEEESS-CSSTTSCHHHHHHHHHHHHHTTCEE
T ss_pred CCCCcccccCcHHHHHhhhhcCCeEEEECCCHHHHHHHHHHHHcCCceEEEEcC-cccccCCHHHHHHHHHHHHHCCCEE
Confidence 122112245678888888888999999999999999999999999999999986 4788899999999999999999999
Q ss_pred EeCceEEEEEEc-CCeEEEEEeecCCCceEEEEcCEEEEeecCCCCCCCCCccccceeec-CCCCeecCCCCCCCCCCeE
Q 011787 273 MLKTKVVGVDLS-GDGVKLTLEPAAGGEKTILEADVVLVSAGRTPFTAGLGLDKIGVETD-KMGRIPVNERFATNIPGVY 350 (477)
Q Consensus 273 ~~~~~v~~i~~~-~~~~~v~~~~~~~~~~~~i~~D~vi~a~G~~p~~~~l~~~~~gl~~~-~~g~i~vd~~l~t~~~~vy 350 (477)
++++.+.+++.. ++.+.+++.+..++...++++|.|++|+|++|+++.+.++..|+.++ ++|+|.||+++||++|+||
T Consensus 243 ~~~~~v~~i~~~~~~~~~v~~~~~~~g~~~~~~~D~vi~a~G~~p~~~~l~l~~~g~~~~~~~G~i~vd~~~~t~~~~Iy 322 (488)
T 3dgz_A 243 LKGCVPSHIKKLPTNQLQVTWEDHASGKEDTGTFDTVLWAIGRVPETRTLNLEKAGISTNPKNQKIIVDAQEATSVPHIY 322 (488)
T ss_dssp EETEEEEEEEECTTSCEEEEEEETTTTEEEEEEESEEEECSCEEESCGGGTGGGGTCCBCSSSCCBCCCTTSBCSSTTEE
T ss_pred EeCCEEEEEEEcCCCcEEEEEEeCCCCeeEEEECCEEEEcccCCcccCcCCccccCcEecCCCCeEeECCCCccCCCCEE
Confidence 999999999874 44566766543333334689999999999999999877788999998 7899999999999999999
Q ss_pred EecccC-CCCCchhHHHHHHHHHHHHHcCCCC-CCCCCCCceEEEcCCCeeeecCCHHHHHHc-C-CCEEEEEEecCccc
Q 011787 351 AIGDVI-PGPMLAHKAEEDGVACVEFLAGKHG-HVDYDKVPGVVYTHPEVASVGKTEEQVKEL-G-VEYRVGKFPFLANS 426 (477)
Q Consensus 351 a~GD~~-~~~~~~~~A~~~g~~aa~~i~~~~~-~~~~~~~p~~~~~~~~~~~~G~~~~~~~~~-~-~~~~~~~~~~~~~~ 426 (477)
|+|||+ +.|.+++.|..||++||+||++... ..++..+|+++|++|+++++|+||+||++. + ..+.+...++....
T Consensus 323 A~GD~~~~~~~~~~~A~~~g~~aa~~i~g~~~~~~~~~~~p~~~~~~p~~a~vGlte~~a~~~~~~~~~~~~~~~~~~~~ 402 (488)
T 3dgz_A 323 AIGDVAEGRPELTPTAIKAGKLLAQRLFGKSSTLMDYSNVPTTVFTPLEYGCVGLSEEEAVALHGQEHVEVYHAYYKPLE 402 (488)
T ss_dssp ECGGGBTTCCCCHHHHHHHHHHHHHHHHSCCCCCCCCTTCCEEECSSSEEEEEECCHHHHHHHHCGGGEEEEEEECCCHH
T ss_pred EeEEecCCCCcchhHHHHHHHHHHHHHcCCCCccCCCCCCCEEEECCCCeEEEeCCHHHHHhhCCCCcEEEEEccccchh
Confidence 999998 6788999999999999999998653 467889999999999999999999999875 3 45777665555443
Q ss_pred cchhc-CCCceEEEEEEE-CCCCeEEEEEEEcCChHHHHHHHHHHhcCC
Q 011787 427 RAKAI-DDAEGIVKILAE-KETDKILGVHIMAPNAGELIHEAAMATHDK 473 (477)
Q Consensus 427 ~~~~~-~~~~~~~k~~~~-~~~~~i~G~~~~g~~~~~~~~~~~~~~~~~ 473 (477)
+.... ++++|++|+++| ++|++|||+|++|++|.|+|+.+++||.++
T Consensus 403 ~~~~~~~~~~g~~k~i~~~~~~~~ilG~~~~g~~a~e~i~~~~~ai~~~ 451 (488)
T 3dgz_A 403 FTVADRDASQCYIKMVCMREPPQLVLGLHFLGPNAGEVTQGFALGIKCG 451 (488)
T ss_dssp HHHTTCCCTTCEEEEEEESSTTCBEEEEEEEETTHHHHHHHHHHHHHTT
T ss_pred hhhhccCCCcEEEEEEEecCCCCEEEEEEEECCCHHHHHHHHHHHHHCC
Confidence 33222 236899999999 589999999999999999999999999854
No 20
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=100.00 E-value=7.2e-65 Score=514.45 Aligned_cols=420 Identities=25% Similarity=0.432 Sum_probs=375.0
Q ss_pred CCCcEEEECCChHHHHHHHHHHHCCCeEEEEecCCCCCceeeccCccCchhhhhhhHHHHHHHhhhhhCCccccccccCh
Q 011787 42 DENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSVEVDL 121 (477)
Q Consensus 42 ~~~dvvIIGgG~AGl~aA~~l~~~g~~V~lie~~~~~GG~~~~~~~~p~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 121 (477)
.++||+|||||+||++||..|++.|++|+|||+ +.+||+|.+.+|+|++.++.......... .+..+++......++|
T Consensus 25 ~~~DVvVIGgG~aGl~aA~~la~~G~~V~liEk-~~~GG~~~~~gcip~k~l~~~a~~~~~~~-~~~~~g~~~~~~~~~~ 102 (484)
T 3o0h_A 25 FDFDLFVIGSGSGGVRAARLAGALGKRVAIAEE-YRIGGTCVIRGCVPKKLYFYASQYAQEFS-KSIGFGWKYADPIFNW 102 (484)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHHTTCCEEEEES-SCTTHHHHHHSHHHHHHHHHHHHHHHHHH-HHGGGTBCCCCCEECH
T ss_pred CCCCEEEECcCHHHHHHHHHHHhCcCEEEEEeC-CCCCCceeccCccccHHHHHHHHHHHHHH-HHHhCCcccCCCccCH
Confidence 468999999999999999999999999999999 78999999999999999888877766554 3567788776678999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhCCeEEEEeEEEEecCCEEEEEecCCceEEEEecEEEEccCCCCC-CCCCCccCCce
Q 011787 122 PAMMAQKDKAVSNLTRGIEGLFKKNKVTYVKGYGKFISPSEVSVDTIEGGNTVVKGKNIIIATGSDVK-SLPGITIDEKR 200 (477)
Q Consensus 122 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~v~~~~g~~~~i~~d~lvlAtG~~~~-~~~g~~~~~~~ 200 (477)
..+..+.......+...+...+.+.+++++.+.+.+++...+.+. .++ ..+.||++|||||+.|. .++..+ ...
T Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~~~i~~~~v~v~-~~~--~~~~~d~lviAtG~~p~~~p~i~G--~~~ 177 (484)
T 3o0h_A 103 EKLVAAKNKEISRLEGLYREGLQNSNVHIYESRAVFVDEHTLELS-VTG--ERISAEKILIATGAKIVSNSAIKG--SDL 177 (484)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTCEEEESCEEEEETTEEEET-TTC--CEEEEEEEEECCCEEECCC--CBT--GGG
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEEeeCCEEEEe-cCC--eEEEeCEEEEccCCCcccCCCCCC--ccc
Confidence 999999999888888888888999999999999999998876664 244 68999999999999886 332211 124
Q ss_pred EecchhhhcccCCCCeeEEEcccHHHHHHHHHHHHcCCcEEEEEeCCCcCCCCCHHHHHHHHHHHHhcCcEEEeCceEEE
Q 011787 201 IVSSTGALALNEVPKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIVPSMDGEIRKQFQRSLEKQKMKFMLKTKVVG 280 (477)
Q Consensus 201 ~~~~~~~~~~~~~~~~v~IiG~G~~g~e~a~~l~~~g~~Vtli~~~~~~~~~~~~~~~~~~~~~l~~~gv~~~~~~~v~~ 280 (477)
+++.+++..+...+++++|||+|++|+|+|..+++.|.+|+++++.+.+++.+++++.+.+.+.+++.||+++++++|++
T Consensus 178 ~~~~~~~~~~~~~~~~v~ViGgG~~g~e~A~~l~~~g~~Vtli~~~~~~l~~~~~~~~~~l~~~l~~~Gv~i~~~~~V~~ 257 (484)
T 3o0h_A 178 CLTSNEIFDLEKLPKSIVIVGGGYIGVEFANIFHGLGVKTTLLHRGDLILRNFDYDLRQLLNDAMVAKGISIIYEATVSQ 257 (484)
T ss_dssp SBCTTTGGGCSSCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSTTSCHHHHHHHHHHHHHHTCEEESSCCEEE
T ss_pred cccHHHHHhHHhcCCcEEEECcCHHHHHHHHHHHHcCCeEEEEECCCccccccCHHHHHHHHHHHHHCCCEEEeCCEEEE
Confidence 67778888888889999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEcCCeEEEEEeecCCCceEEEEcCEEEEeecCCCCCCCCCccccceeecCCCCeecCCCCCCCCCCeEEecccCCCCC
Q 011787 281 VDLSGDGVKLTLEPAAGGEKTILEADVVLVSAGRTPFTAGLGLDKIGVETDKMGRIPVNERFATNIPGVYAIGDVIPGPM 360 (477)
Q Consensus 281 i~~~~~~~~v~~~~~~~~~~~~i~~D~vi~a~G~~p~~~~l~~~~~gl~~~~~g~i~vd~~l~t~~~~vya~GD~~~~~~ 360 (477)
++.+++++.+++. +++++++|.||+|+|++|+...+.++..|++++++|+|.||+++||++|+|||+|||++.+.
T Consensus 258 i~~~~~~v~v~~~-----~g~~i~aD~Vi~A~G~~p~~~~l~l~~~g~~~~~~G~i~vd~~~~t~~~~Iya~GD~~~~~~ 332 (484)
T 3o0h_A 258 VQSTENCYNVVLT-----NGQTICADRVMLATGRVPNTTGLGLERAGVKVNEFGAVVVDEKMTTNVSHIWAVGDVTGHIQ 332 (484)
T ss_dssp EEECSSSEEEEET-----TSCEEEESEEEECCCEEECCTTCCHHHHTCCBCTTSCBCCCTTSBCSSTTEEECGGGGTSCC
T ss_pred EEeeCCEEEEEEC-----CCcEEEcCEEEEeeCCCcCCCCCChhhcCceECCCCCEeECCCCCCCCCCEEEEEecCCCCc
Confidence 9988777777764 45689999999999999999987778889999999999999999999999999999999999
Q ss_pred chhHHHHHHHHHHHHHcCCC-CCCCCCCCceEEEcCCCeeeecCCHHHHHHcCCCEEEEEEecCccccchhcCCCceEEE
Q 011787 361 LAHKAEEDGVACVEFLAGKH-GHVDYDKVPGVVYTHPEVASVGKTEEQVKELGVEYRVGKFPFLANSRAKAIDDAEGIVK 439 (477)
Q Consensus 361 ~~~~A~~~g~~aa~~i~~~~-~~~~~~~~p~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k 439 (477)
+++.|..||+++|+||++.. ...++..+|+++|++|+++++|+||++|++.|.++.+..+++....++...+++.+++|
T Consensus 333 ~~~~A~~~g~~aa~~i~~~~~~~~~~~~~p~~~~~~p~~a~vGlte~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~k 412 (484)
T 3o0h_A 333 LTPVAIHDAMCFVKNAFENTSTTPDYDLITTAVFSQPEIGTVGLSEEDALHRYKRVEIYRTVFRPMRNVLSGSPEKMFMK 412 (484)
T ss_dssp CHHHHHHHHHHHHHHHHC---CCCCCTTCCEEECCSSCEEEEECCHHHHHHHCSEEEEEEEEECCHHHHHHTCCCCEEEE
T ss_pred CHHHHHHHHHHHHHHHcCCCCCcCCCCCCcEEEECCCCEEEeeCCHHHHHHcCCCEEEEEecCCcchhhccCCCCcEEEE
Confidence 99999999999999999864 34688899999999999999999999999999999999999998888887788899999
Q ss_pred EEEECCCCeEEEEEEEcCChHHHHHHHHHHhcCC
Q 011787 440 ILAEKETDKILGVHIMAPNAGELIHEAAMATHDK 473 (477)
Q Consensus 440 ~~~~~~~~~i~G~~~~g~~~~~~~~~~~~~~~~~ 473 (477)
+++|+++++|||+|++|+++.|+|+.+++||.++
T Consensus 413 ~~~~~~~~~ilG~~~~g~~a~~~i~~~~~ai~~~ 446 (484)
T 3o0h_A 413 LVVDGESRIVVGAHVLGENAGEIAQLIGISLKGK 446 (484)
T ss_dssp EEEETTTCBEEEEEEESTTHHHHHHHHHHHHHTT
T ss_pred EEEECCCCEEEEEEEECcCHHHHHHHHHHHHHCC
Confidence 9999999999999999999999999999999854
No 21
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.5e-64 Score=509.60 Aligned_cols=422 Identities=29% Similarity=0.491 Sum_probs=363.7
Q ss_pred CCCCCcEEEECCChHHHHHHHHHHHCCCeEEEEecCCCCCceeeccCccCchhhhhhhHHHHHHHhhhhhCCccc-----
Q 011787 40 ASDENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKF----- 114 (477)
Q Consensus 40 ~~~~~dvvIIGgG~AGl~aA~~l~~~g~~V~lie~~~~~GG~~~~~~~~p~~~l~~~~~~~~~~~~~~~~~g~~~----- 114 (477)
++.++||+|||||+||++||.+|++.|++|+|||++ .+||+|.+.+|+|++.++.......... ....+++..
T Consensus 8 ~~~~~dVvVIGgG~aGl~aA~~l~~~g~~V~liE~~-~~GG~~~n~gciP~k~l~~~~~~~~~~~-~~~~~g~~~~~~~~ 85 (479)
T 2hqm_A 8 NTKHYDYLVIGGGSGGVASARRAASYGAKTLLVEAK-ALGGTCVNVGCVPKKVMWYASDLATRVS-HANEYGLYQNLPLD 85 (479)
T ss_dssp --CEEEEEEECCSHHHHHHHHHHHHTSCCEEEEESS-CTTHHHHHHSHHHHHHHHHHHHHHHHHT-TTTTTTBSTTSCCS
T ss_pred ccccCCEEEEcCCHHHHHHHHHHHHCCCcEEEEeCC-CcCCcCcccCcHHHHHHHHHHHHHHHHH-hHHhcCcccccccc
Confidence 345689999999999999999999999999999996 7999999999999998876665544433 334455543
Q ss_pred c-ccccChHHHHHHHHHHHHHHHHHHHHHhhhCCeEEEEeEEEEecCCEEEEEecCCceEEEEecEEEEccCCCCCCC--
Q 011787 115 S-SVEVDLPAMMAQKDKAVSNLTRGIEGLFKKNKVTYVKGYGKFISPSEVSVDTIEGGNTVVKGKNIIIATGSDVKSL-- 191 (477)
Q Consensus 115 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~v~~~~g~~~~i~~d~lvlAtG~~~~~~-- 191 (477)
. ...++|..+..+.......+...+...+++.+++++.+++.+++++.+.+.+.+|...++.||+||||||++|..+
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~g~~~~i~~~~~~v~~~~g~~~~~~~d~lviAtGs~p~~p~~ 165 (479)
T 2hqm_A 86 KEHLTFNWPEFKQKRDAYVHRLNGIYQKNLEKEKVDVVFGWARFNKDGNVEVQKRDNTTEVYSANHILVATGGKAIFPEN 165 (479)
T ss_dssp GGGCCBCHHHHHHHHHHHHHHHHHHHHHHHHHTTEEEEEEEEEECTTSCEEEEESSSCCEEEEEEEEEECCCEEECCCTT
T ss_pred cccCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEEeeCCEEEEEeCCCcEEEEEeCEEEEcCCCCCCCCCC
Confidence 2 3467899998888888888888888888889999999999899988888887777444899999999999988544
Q ss_pred -CCCccCCceEecchhhhcccCCCCeeEEEcccHHHHHHHHHHHHcCCcEEEEEeCCCcCCCCCHHHHHHHHHHHHhcCc
Q 011787 192 -PGITIDEKRIVSSTGALALNEVPKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIVPSMDGEIRKQFQRSLEKQKM 270 (477)
Q Consensus 192 -~g~~~~~~~~~~~~~~~~~~~~~~~v~IiG~G~~g~e~a~~l~~~g~~Vtli~~~~~~~~~~~~~~~~~~~~~l~~~gv 270 (477)
|+. ..+++++++..+...+++++|||+|++|+|+|..|++.|.+|+++++.+++++.+++++.+.+.+.+++.||
T Consensus 166 i~g~----~~~~~~~~~~~l~~~~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~~~d~~~~~~l~~~l~~~Gv 241 (479)
T 2hqm_A 166 IPGF----ELGTDSDGFFRLEEQPKKVVVVGAGYIGIELAGVFHGLGSETHLVIRGETVLRKFDECIQNTITDHYVKEGI 241 (479)
T ss_dssp STTG----GGSBCHHHHHHCSSCCSEEEEECSSHHHHHHHHHHHHTTCEEEEECSSSSSCTTSCHHHHHHHHHHHHHHTC
T ss_pred CCCc----ccccchHHHhcccccCCeEEEECCCHHHHHHHHHHHHcCCceEEEEeCCccccccCHHHHHHHHHHHHhCCe
Confidence 333 235677888888888999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEeCceEEEEEEcCCe--EEEEEeecCCCce-EEEEcCEEEEeecCCCCCCCCCccccceeecCCCCeecCCCCCCCCC
Q 011787 271 KFMLKTKVVGVDLSGDG--VKLTLEPAAGGEK-TILEADVVLVSAGRTPFTAGLGLDKIGVETDKMGRIPVNERFATNIP 347 (477)
Q Consensus 271 ~~~~~~~v~~i~~~~~~--~~v~~~~~~~~~~-~~i~~D~vi~a~G~~p~~~~l~~~~~gl~~~~~g~i~vd~~l~t~~~ 347 (477)
+++++++|++++.++++ +.+++. ++ +++++|.|++|+|++||+ .+.++..|++++++|+|.||+++||+.|
T Consensus 242 ~i~~~~~v~~i~~~~~~~~~~v~~~-----~G~~~i~~D~vv~a~G~~p~~-~l~l~~~gl~~~~~G~i~vd~~~~t~~~ 315 (479)
T 2hqm_A 242 NVHKLSKIVKVEKNVETDKLKIHMN-----DSKSIDDVDELIWTIGRKSHL-GMGSENVGIKLNSHDQIIADEYQNTNVP 315 (479)
T ss_dssp EEECSCCEEEEEECC-CCCEEEEET-----TSCEEEEESEEEECSCEEECC-CSSGGGGTCCBCTTSCBCCCTTCBCSST
T ss_pred EEEeCCEEEEEEEcCCCcEEEEEEC-----CCcEEEEcCEEEECCCCCCcc-ccChhhcCceECCCCCEeECCCCccCCC
Confidence 99999999999876544 566654 44 689999999999999999 4446888999998999999999999999
Q ss_pred CeEEecccCCCCCchhHHHHHHHHHHHHHcCCC----CCCCCCCCceEEEcCCCeeeecCCHHHHHHc-C-CCEEEEEEe
Q 011787 348 GVYAIGDVIPGPMLAHKAEEDGVACVEFLAGKH----GHVDYDKVPGVVYTHPEVASVGKTEEQVKEL-G-VEYRVGKFP 421 (477)
Q Consensus 348 ~vya~GD~~~~~~~~~~A~~~g~~aa~~i~~~~----~~~~~~~~p~~~~~~~~~~~~G~~~~~~~~~-~-~~~~~~~~~ 421 (477)
+|||+|||++.+.+++.|..||++||.||++.. ...++..+|+.+|++|+++++|+++++++.. + .++++...+
T Consensus 316 ~IyA~GD~~~~~~~~~~A~~~g~~aa~~i~~~~~~~~~~~~~~~~p~~~~~~~~~~~vGl~e~~a~~~~~~~~~~~~~~~ 395 (479)
T 2hqm_A 316 NIYSLGDVVGKVELTPVAIAAGRKLSNRLFGPEKFRNDKLDYENVPSVIFSHPEAGSIGISEKEAIEKYGKENIKVYNSK 395 (479)
T ss_dssp TEEECGGGTTSSCCHHHHHHHHHHHHHHHHSCGGGTTCCCCCTTCCEEECCSSCEEEEECCHHHHHHHHCGGGEEEEEEE
T ss_pred CEEEEEecCCCcccHHHHHHHHHHHHHHhcCCCccCcccCCCCCCCeEEECCCCeEEEeCCHHHHHhcCCCCcEEEEEEe
Confidence 999999999889999999999999999999753 3457778999999999999999999999876 4 358888888
Q ss_pred cCccccchhcCCCceEEEEEEECCCCeEEEEEEEcCChHHHHHHHHHHhcCC
Q 011787 422 FLANSRAKAIDDAEGIVKILAEKETDKILGVHIMAPNAGELIHEAAMATHDK 473 (477)
Q Consensus 422 ~~~~~~~~~~~~~~~~~k~~~~~~~~~i~G~~~~g~~~~~~~~~~~~~~~~~ 473 (477)
+....++...+++.+++|+++|+++++|||+|++|+++.|+|+.+++||.++
T Consensus 396 ~~~~~~~~~~~~~~~~~kli~~~~~~~ilG~~~~g~~a~~~i~~~~~ai~~~ 447 (479)
T 2hqm_A 396 FTAMYYAMLSEKSPTRYKIVCAGPNEKVVGLHIVGDSSAEILQGFGVAIKMG 447 (479)
T ss_dssp ECCGGGGGCSSCCCEEEEEEEETTTTEEEEEEEESTTHHHHHHHHHHHHHTT
T ss_pred ccHHHHHhhcCCCcEEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHCC
Confidence 8888887766778899999999999999999999999999999999999854
No 22
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=100.00 E-value=2.7e-64 Score=510.12 Aligned_cols=424 Identities=28% Similarity=0.429 Sum_probs=368.7
Q ss_pred CCCcEEEECCChHHHHHHHHHHH-CCCeEEEEe--------cCCCCCceeeccCccCchhhhhhhHHHHHHHhhhhhCCc
Q 011787 42 DENDVVVIGGGPGGYVAAIKAAQ-LGLKTTCIE--------KRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGV 112 (477)
Q Consensus 42 ~~~dvvIIGgG~AGl~aA~~l~~-~g~~V~lie--------~~~~~GG~~~~~~~~p~~~l~~~~~~~~~~~~~~~~~g~ 112 (477)
.++||+|||||+||++||.+|++ .|++|+||| +...+||+|.+.+|+|++.++.....++... ....+++
T Consensus 2 ~~~dvvVIGgG~aGl~aA~~la~~~G~~V~liE~~~~~~~~~~~~~GG~c~~~gciPsk~l~~~a~~~~~~~-~~~~~g~ 80 (490)
T 1fec_A 2 RAYDLVVIGAGSGGLEAGWNAASLHKKRVAVIDLQKHHGPPHYAALGGTCVNVGCVPKKLMVTGANYMDTIR-ESAGFGW 80 (490)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHHHHCCCEEEEESCSSSBTTTBSCTTCHHHHHSHHHHHHHHHHHHHHHHHH-HGGGGTE
T ss_pred ccccEEEECCCHHHHHHHHHHHHHcCCEEEEEecccccccccCCCcCccccCCCcchhhHHHHHHHHHHHHH-HHHhcCc
Confidence 35899999999999999999999 999999999 3578999999999999999888777666554 3556677
Q ss_pred ccccc--ccChHHHHHHHHHHHHHHHHHHHHHhhhC-CeEEEEeEEEEecCCEEEEEe---cCCc-eEEEEecEEEEccC
Q 011787 113 KFSSV--EVDLPAMMAQKDKAVSNLTRGIEGLFKKN-KVTYVKGYGKFISPSEVSVDT---IEGG-NTVVKGKNIIIATG 185 (477)
Q Consensus 113 ~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~v~~~~~~~~~~~~~~~~v~~---~~g~-~~~i~~d~lvlAtG 185 (477)
..... .++|..+..+..+....+...+...+++. +++++.+++.+++++.+.+.. .+|. ...+.||+||||||
T Consensus 81 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~gv~~~~g~~~~i~~~~v~v~~~~~~~g~~~~~~~~d~lviAtG 160 (490)
T 1fec_A 81 ELDRESVRPNWKALIAAKNKAVSGINDSYEGMFADTEGLTFHQGFGALQDNHTVLVRESADPNSAVLETLDTEYILLATG 160 (490)
T ss_dssp ECCGGGCEECHHHHHHHHHHHHHHHHHHHHHHHHTSTTEEEEESEEEEEETTEEEEESSSSTTSCEEEEEEEEEEEECCC
T ss_pred ccCCcccccCHHHHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEeEEEEeeCCEEEEEeeccCCCCceEEEEcCEEEEeCC
Confidence 65444 68999999999998888888888888888 999999999999988777764 2442 26799999999999
Q ss_pred CCCCCCCCCccCCceEecchhhhcccCCCCeeEEEcccHHHHHHHHHHHHc---CCcEEEEEeCCCcCCCCCHHHHHHHH
Q 011787 186 SDVKSLPGITIDEKRIVSSTGALALNEVPKKLVVIGAGYIGLEMGSVWARL---GSEVTVVEFAADIVPSMDGEIRKQFQ 262 (477)
Q Consensus 186 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~v~IiG~G~~g~e~a~~l~~~---g~~Vtli~~~~~~~~~~~~~~~~~~~ 262 (477)
++|..++..+. ..+++++++..+...+++++|||+|++|+|+|..|++. |.+|+++++.+++++.+++++.+.+.
T Consensus 161 s~p~~p~i~g~--~~~~~~~~~~~~~~~~~~vvViGgG~ig~E~A~~l~~~~~~g~~Vtlv~~~~~~l~~~d~~~~~~l~ 238 (490)
T 1fec_A 161 SWPQHLGIEGD--DLCITSNEAFYLDEAPKRALCVGGGYISIEFAGIFNAYKARGGQVDLAYRGDMILRGFDSELRKQLT 238 (490)
T ss_dssp EEECCCCSBTG--GGCBCHHHHTTCSSCCSEEEEECSSHHHHHHHHHHHHHSCTTCEEEEEESSSSSSTTSCHHHHHHHH
T ss_pred CCCCCCCCCCc--cceecHHHHhhhhhcCCeEEEECCCHHHHHHHHHHHhhccCcCeEEEEEcCCCcccccCHHHHHHHH
Confidence 98864432111 24678888888888899999999999999999999999 99999999999999999999999999
Q ss_pred HHHHhcCcEEEeCceEEEEEEcCC-eEEEEEeecCCCceEEEEcCEEEEeecCCCCCCCCCccccceeecCCCCeecCCC
Q 011787 263 RSLEKQKMKFMLKTKVVGVDLSGD-GVKLTLEPAAGGEKTILEADVVLVSAGRTPFTAGLGLDKIGVETDKMGRIPVNER 341 (477)
Q Consensus 263 ~~l~~~gv~~~~~~~v~~i~~~~~-~~~v~~~~~~~~~~~~i~~D~vi~a~G~~p~~~~l~~~~~gl~~~~~g~i~vd~~ 341 (477)
+.+++.||+++++++|++++.+++ .+.+++. +++++++|.||+|+|++||++.+.++.+|++++++|+|.||++
T Consensus 239 ~~l~~~GV~i~~~~~v~~i~~~~~~~~~v~~~-----~G~~i~~D~vv~a~G~~p~~~~L~l~~~gl~~~~~G~I~Vd~~ 313 (490)
T 1fec_A 239 EQLRANGINVRTHENPAKVTKNADGTRHVVFE-----SGAEADYDVVMLAIGRVPRSQTLQLEKAGVEVAKNGAIKVDAY 313 (490)
T ss_dssp HHHHHTTEEEEETCCEEEEEECTTSCEEEEET-----TSCEEEESEEEECSCEEESCTTSCGGGGTCCBCTTSCBCCCTT
T ss_pred HHHHhCCCEEEeCCEEEEEEEcCCCEEEEEEC-----CCcEEEcCEEEEccCCCcCccccCchhcCccCCCCCCEEECCC
Confidence 999999999999999999987654 4566654 4458999999999999999986557888999998899999999
Q ss_pred CCCCCCCeEEecccCCCCCchhHHHHHHHHHHHHHcCCC-CCCCCCCCceEEEcCCCeeeecCCHHHHHHcCCCEEEEEE
Q 011787 342 FATNIPGVYAIGDVIPGPMLAHKAEEDGVACVEFLAGKH-GHVDYDKVPGVVYTHPEVASVGKTEEQVKELGVEYRVGKF 420 (477)
Q Consensus 342 l~t~~~~vya~GD~~~~~~~~~~A~~~g~~aa~~i~~~~-~~~~~~~~p~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~ 420 (477)
+||+.|+|||+|||++.+.+++.|..||++||.||++.. ...++..+|+++|++|+++++|++|++++..+.++.+...
T Consensus 314 ~~t~~~~IyA~GD~~~~~~l~~~A~~~g~~aa~~i~g~~~~~~~~~~~p~~~~~~~~~a~vG~~e~~a~~~~~~~~~~~~ 393 (490)
T 1fec_A 314 SKTNVDNIYAIGDVTDRVMLTPVAINEGAAFVDTVFANKPRATDHTKVACAVFSIPPMGVCGYVEEDAAKKYDQVAVYES 393 (490)
T ss_dssp CBCSSTTEEECGGGGCSCCCHHHHHHHHHHHHHHHHSSCCCCCCCSSCCEEECCSSCEEEEECCHHHHHHHCSEEEEEEE
T ss_pred CccCCCCEEEEeccCCCccCHHHHHHHHHHHHHHhcCCCCCcCCCCCccEEEECCCCeEEEeCCHHHHHhcCCCEEEEEe
Confidence 999999999999999988999999999999999999853 4467888999999999999999999999888878888888
Q ss_pred ecCccccchhcCCCceEE-EEEEECCCCeEEEEEEEcCChHHHHHHHHHHhcCC
Q 011787 421 PFLANSRAKAIDDAEGIV-KILAEKETDKILGVHIMAPNAGELIHEAAMATHDK 473 (477)
Q Consensus 421 ~~~~~~~~~~~~~~~~~~-k~~~~~~~~~i~G~~~~g~~~~~~~~~~~~~~~~~ 473 (477)
++....++....++.+|+ |+++|+++++|||+|++|+++.|+|+.+++||.++
T Consensus 394 ~~~~~~~~~~~~~~~~~~~kli~~~~~~~ilG~~~~g~~a~~~i~~~~~ai~~~ 447 (490)
T 1fec_A 394 SFTPLMHNISGSTYKKFMVRIVTNHADGEVLGVHMLGDSSPEIIQSVAICLKMG 447 (490)
T ss_dssp EECCHHHHHHSCTTCCEEEEEEEETTTTEEEEEEEESTTHHHHHHHHHHHHHTT
T ss_pred ecChhhhhhhcCCCeEEEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHcC
Confidence 887777766666788999 99999999999999999999999999999999754
No 23
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=100.00 E-value=6.7e-65 Score=509.70 Aligned_cols=417 Identities=29% Similarity=0.495 Sum_probs=364.1
Q ss_pred CCCcEEEECCChHHHHHHHHHHHCCCeEEEEecCCCCCceeeccCccCchhhhhhhHHHHHHHhhhhhCCccccccccCh
Q 011787 42 DENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSVEVDL 121 (477)
Q Consensus 42 ~~~dvvIIGgG~AGl~aA~~l~~~g~~V~lie~~~~~GG~~~~~~~~p~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 121 (477)
.++||+|||||+||++||.+|++.|++|+|||++ .+||+|.+.+|+|++.++...............+++......++|
T Consensus 3 ~~~dvvIIGgG~aGl~aA~~l~~~g~~V~liE~~-~~GG~~~~~gciP~k~l~~~a~~~~~~~~~~~~~g~~~~~~~~~~ 81 (450)
T 1ges_A 3 KHYDYIAIGGGSGGIASINRAAMYGQKCALIEAK-ELGGTCVNVGCVPKKVMWHAAQIREAIHMYGPDYGFDTTINKFNW 81 (450)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHTTTCCEEEEESS-CTTHHHHHHSHHHHHHHHHHHHHHHHHHTTGGGGTEEEEEEEECH
T ss_pred ccCCEEEECCCHHHHHHHHHHHhCCCeEEEEcCC-CCCCcccccCccChHHHHHHHHHHHHHHHHHHhcCccCCCCccCH
Confidence 4689999999999999999999999999999996 899999999999999988777666555424455666555567899
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhCCeEEEEeEEEEecCCEEEEEecCCceEEEEecEEEEccCCCCCCC--CCCccCCc
Q 011787 122 PAMMAQKDKAVSNLTRGIEGLFKKNKVTYVKGYGKFISPSEVSVDTIEGGNTVVKGKNIIIATGSDVKSL--PGITIDEK 199 (477)
Q Consensus 122 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~v~~~~g~~~~i~~d~lvlAtG~~~~~~--~g~~~~~~ 199 (477)
..+..+.......+...+...+.+.+++++.+++.+++...+.+ ++ ..+.||+||||||++|..+ |+. .
T Consensus 82 ~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~~~i~~~~v~~---~g--~~~~~d~lviAtGs~p~~p~i~g~----~ 152 (450)
T 1ges_A 82 ETLIASRTAYIDRIHTSYENVLGKNNVDVIKGFARFVDAKTLEV---NG--ETITADHILIATGGRPSHPDIPGV----E 152 (450)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTCEEEESCCEEEETTEEEE---TT--EEEEEEEEEECCCEEECCCCSTTG----G
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEEecCCEEEE---CC--EEEEeCEEEECCCCCCCCCCCCCc----c
Confidence 99999988888888888888888899999999888888876555 45 6899999999999988543 333 2
Q ss_pred eEecchhhhcccCCCCeeEEEcccHHHHHHHHHHHHcCCcEEEEEeCCCcCCCCCHHHHHHHHHHHHhcCcEEEeCceEE
Q 011787 200 RIVSSTGALALNEVPKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIVPSMDGEIRKQFQRSLEKQKMKFMLKTKVV 279 (477)
Q Consensus 200 ~~~~~~~~~~~~~~~~~v~IiG~G~~g~e~a~~l~~~g~~Vtli~~~~~~~~~~~~~~~~~~~~~l~~~gv~~~~~~~v~ 279 (477)
.+++++++..+...+++++|||+|++|+|+|..|++.|.+|+++++.+.+++.+++++.+.+.+.+++.||+++++++|+
T Consensus 153 ~~~~~~~~~~~~~~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~l~~~l~~~Gv~i~~~~~v~ 232 (450)
T 1ges_A 153 YGIDSDGFFALPALPERVAVVGAGYIGVELGGVINGLGAKTHLFEMFDAPLPSFDPMISETLVEVMNAEGPQLHTNAIPK 232 (450)
T ss_dssp GSBCHHHHHHCSSCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSTTSCHHHHHHHHHHHHHHSCEEECSCCEE
T ss_pred ceecHHHhhhhhhcCCeEEEECCCHHHHHHHHHHHhcCCEEEEEEeCCchhhhhhHHHHHHHHHHHHHCCCEEEeCCEEE
Confidence 46677888888888999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEcCCe-EEEEEeecCCCceEEEEcCEEEEeecCCCCCCCCCccccceeecCCCCeecCCCCCCCCCCeEEecccCCC
Q 011787 280 GVDLSGDG-VKLTLEPAAGGEKTILEADVVLVSAGRTPFTAGLGLDKIGVETDKMGRIPVNERFATNIPGVYAIGDVIPG 358 (477)
Q Consensus 280 ~i~~~~~~-~~v~~~~~~~~~~~~i~~D~vi~a~G~~p~~~~l~~~~~gl~~~~~g~i~vd~~l~t~~~~vya~GD~~~~ 358 (477)
+++.++++ +.+++. +++++++|.|++|+|++||++.+.++.+|++++++|+|.||+++||++|+|||+|||++.
T Consensus 233 ~i~~~~~~~~~v~~~-----~g~~i~~D~vv~a~G~~p~~~~l~~~~~gl~~~~~g~i~vd~~~~t~~~~IyA~GD~~~~ 307 (450)
T 1ges_A 233 AVVKNTDGSLTLELE-----DGRSETVDCLIWAIGREPANDNINLEAAGVKTNEKGYIVVDKYQNTNIEGIYAVGDNTGA 307 (450)
T ss_dssp EEEECTTSCEEEEET-----TSCEEEESEEEECSCEEESCTTSCHHHHTCCBCTTSCBCCCTTSBCSSTTEEECSGGGTS
T ss_pred EEEEeCCcEEEEEEC-----CCcEEEcCEEEECCCCCcCCCCCCchhcCceECCCCCEeECCCCccCCCCEEEEeccCCC
Confidence 99876543 566654 456899999999999999998655688899999889999999999999999999999988
Q ss_pred CCchhHHHHHHHHHHHHHcCCC-CC-CCCCCCceEEEcCCCeeeecCCHHHHHHc-C-CCEEEEEEecCccccchhcCCC
Q 011787 359 PMLAHKAEEDGVACVEFLAGKH-GH-VDYDKVPGVVYTHPEVASVGKTEEQVKEL-G-VEYRVGKFPFLANSRAKAIDDA 434 (477)
Q Consensus 359 ~~~~~~A~~~g~~aa~~i~~~~-~~-~~~~~~p~~~~~~~~~~~~G~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~ 434 (477)
+.+++.|..||+.+|.||++.. .. .++..+|+++|++|+++++|+++++++.. | .++++...++....++...+++
T Consensus 308 ~~~~~~A~~~g~~aa~~i~~~~~~~~~~~~~~p~~~~~~~~~a~vG~~e~~a~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 387 (450)
T 1ges_A 308 VELTPVAVAAGRRLSERLFNNKPDEHLDYSNIPTVVFSHPPIGTVGLTEPQAREQYGDDQVKVYKSSFTAMYTAVTTHRQ 387 (450)
T ss_dssp CCCHHHHHHHHHHHHHHHHTTCTTCCCCCSSCCEEECCSSCEEEEECCHHHHHHHHCGGGEEEEEEEEECHHHHTSSSCC
T ss_pred CccHHHHHHHHHHHHHHHcCCCCcccCCCCCCCeEEECCCceEEEeCCHHHHHhcCCCCcEEEEEEECchhhHHHhcCCC
Confidence 9999999999999999999854 33 57888999999999999999999999887 5 6788888888877777666677
Q ss_pred ceEEEEEEECCCCeEEEEEEEcCChHHHHHHHHHHhcCC
Q 011787 435 EGIVKILAEKETDKILGVHIMAPNAGELIHEAAMATHDK 473 (477)
Q Consensus 435 ~~~~k~~~~~~~~~i~G~~~~g~~~~~~~~~~~~~~~~~ 473 (477)
.+|+|+++|+++++|+|+|++|+++.|+|+.+++||.++
T Consensus 388 ~~~~k~~~~~~~~~ilG~~~~g~~a~~~i~~~~~ai~~~ 426 (450)
T 1ges_A 388 PCRMKLVCVGSEEKIVGIHGIGFGMDEMLQGFAVALKMG 426 (450)
T ss_dssp EEEEEEEEETTTTEEEEEEEESTTHHHHHHHHHHHHHTT
T ss_pred cEEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHCC
Confidence 899999999999999999999999999999999999754
No 24
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=100.00 E-value=5.9e-64 Score=506.02 Aligned_cols=424 Identities=32% Similarity=0.499 Sum_probs=365.7
Q ss_pred CCCCcEEEECCChHHHHHHHHHHHCCCeEEEEecCCCCCceeeccCccCchhhhhhhHHHHHHHhhhhhC-Ccccccccc
Q 011787 41 SDENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASH-GVKFSSVEV 119 (477)
Q Consensus 41 ~~~~dvvIIGgG~AGl~aA~~l~~~g~~V~lie~~~~~GG~~~~~~~~p~~~l~~~~~~~~~~~~~~~~~-g~~~~~~~~ 119 (477)
+.++||+|||||+||++||.+|++.|++|+|||++ .+||+|.+.+|+|++.++.....++.... ...+ |+.......
T Consensus 2 ~~~~dvvIIGgG~aGl~aA~~l~~~g~~V~lie~~-~~GG~~~~~g~ip~k~l~~~~~~~~~~~~-~~~~~g~~~~~~~~ 79 (467)
T 1zk7_A 2 EPPVQVAVIGSGGAAMAAALKAVEQGAQVTLIERG-TIGGTCVNVGCVPSKIMIRAAHIAHLRRE-SPFDGGIAATVPTI 79 (467)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESS-STTHHHHHHSHHHHHHHHHHHHHHHHHHC-CTTTTTSCCCCCCC
T ss_pred CCcCCEEEECCCHHHHHHHHHHHHCCCEEEEEeCC-CCCccccCCCccchHHHHHHHHHHHHHhh-hhhcCCccCCCCcc
Confidence 45689999999999999999999999999999996 89999999999999988877665544332 2233 454444567
Q ss_pred ChHHHHHHHHHHHHHHHH-HHHHHhhhC-CeEEEEeEEEEecCCEEEEEecCCceEEEEecEEEEccCCCCCCCCCCccC
Q 011787 120 DLPAMMAQKDKAVSNLTR-GIEGLFKKN-KVTYVKGYGKFISPSEVSVDTIEGGNTVVKGKNIIIATGSDVKSLPGITID 197 (477)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~-~v~~~~~~~~~~~~~~~~v~~~~g~~~~i~~d~lvlAtG~~~~~~~g~~~~ 197 (477)
++..+..+..+....+.. .+..++++. +++++.+++.+++.+.+.|.+.+|+...+.||+||||||++|..++..+.+
T Consensus 80 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~v~~~~g~~~~~~~~~~~v~~~~g~~~~~~~d~lviAtGs~p~~p~i~G~~ 159 (467)
T 1zk7_A 80 DRSKLLAQQQARVDELRHAKYEGILGGNPAITVVHGEARFKDDQSLTVRLNEGGERVVMFDRCLVATGASPAVPPIPGLK 159 (467)
T ss_dssp CHHHHHHHHHHHHHHHHHHHTHHHHTTCTTEEEEEEEEEEEETTEEEEEETTSSEEEEECSEEEECCCEEECCCCCTTTT
T ss_pred CHHHHHHHHHHHHHHHhhhhHHHHHhccCCeEEEEEEEEEccCCEEEEEeCCCceEEEEeCEEEEeCCCCCCCCCCCCCC
Confidence 788888777666555543 345667777 999999999999999999988777556899999999999988544322223
Q ss_pred CceEecchhhhcccCCCCeeEEEcccHHHHHHHHHHHHcCCcEEEEEeCCCcCCCCCHHHHHHHHHHHHhcCcEEEeCce
Q 011787 198 EKRIVSSTGALALNEVPKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIVPSMDGEIRKQFQRSLEKQKMKFMLKTK 277 (477)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~~v~IiG~G~~g~e~a~~l~~~g~~Vtli~~~~~~~~~~~~~~~~~~~~~l~~~gv~~~~~~~ 277 (477)
...+++.+++..+...+++++|||+|++|+|+|..|++.|.+|+++++.+++++ +++++.+.+.+.+++.||+++++++
T Consensus 160 ~~~~~~~~~~~~~~~~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~-~~~~~~~~l~~~l~~~Gv~i~~~~~ 238 (467)
T 1zk7_A 160 ESPYWTSTEALASDTIPERLAVIGSSVVALELAQAFARLGSKVTVLARNTLFFR-EDPAIGEAVTAAFRAEGIEVLEHTQ 238 (467)
T ss_dssp TSCCBCHHHHHHCSSCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCTTTT-SCHHHHHHHHHHHHHTTCEEETTCC
T ss_pred cCceecHHHHhcccccCCEEEEECCCHHHHHHHHHHHHcCCEEEEEEECCccCC-CCHHHHHHHHHHHHhCCCEEEcCCE
Confidence 345678888888888899999999999999999999999999999999999999 9999999999999999999999999
Q ss_pred EEEEEEcCCeEEEEEeecCCCceEEEEcCEEEEeecCCCCCCCCCccccceeecCCCCeecCCCCCCCCCCeEEecccCC
Q 011787 278 VVGVDLSGDGVKLTLEPAAGGEKTILEADVVLVSAGRTPFTAGLGLDKIGVETDKMGRIPVNERFATNIPGVYAIGDVIP 357 (477)
Q Consensus 278 v~~i~~~~~~~~v~~~~~~~~~~~~i~~D~vi~a~G~~p~~~~l~~~~~gl~~~~~g~i~vd~~l~t~~~~vya~GD~~~ 357 (477)
|++++.+++.+.+.+. +.++++|.||+|+|++|++..+.++..|++++++|+|.||+++||+.|+|||+|||+.
T Consensus 239 v~~i~~~~~~~~v~~~------~~~i~aD~Vv~a~G~~p~~~~l~l~~~gl~~~~~G~i~vd~~~~t~~~~iya~GD~~~ 312 (467)
T 1zk7_A 239 ASQVAHMDGEFVLTTT------HGELRADKLLVATGRTPNTRSLALDAAGVTVNAQGAIVIDQGMRTSNPNIYAAGDCTD 312 (467)
T ss_dssp EEEEEEETTEEEEEET------TEEEEESEEEECSCEEESCTTSCGGGGTCCBCTTSCBCCCTTCBCSSTTEEECSTTBS
T ss_pred EEEEEEeCCEEEEEEC------CcEEEcCEEEECCCCCcCCCcCCchhcCCcCCCCCCEEECCCcccCCCCEEEEeccCC
Confidence 9999877666555542 3589999999999999999876577889999888999999999999999999999999
Q ss_pred CCCchhHHHHHHHHHHHHHcCCCCCCCCCCCceEEEcCCCeeeecCCHHHHHHcCCCEEEEEEecCccccchhcCCCceE
Q 011787 358 GPMLAHKAEEDGVACVEFLAGKHGHVDYDKVPGVVYTHPEVASVGKTEEQVKELGVEYRVGKFPFLANSRAKAIDDAEGI 437 (477)
Q Consensus 358 ~~~~~~~A~~~g~~aa~~i~~~~~~~~~~~~p~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 437 (477)
.|.+++.|..||+.+|.||++...++++..+|++.|++|+++++|+++++++..|+++.+..+++....++...+++.+|
T Consensus 313 ~~~~~~~A~~~g~~aa~~i~~~~~~~~~~~~p~~~~~~~~~a~vG~~~~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 392 (467)
T 1zk7_A 313 QPQFVYVAAAAGTRAAINMTGGDAALDLTAMPAVVFTDPQVATVGYSEAEAHHDGIETDSRTLTLDNVPRALANFDTRGF 392 (467)
T ss_dssp SCCCHHHHHHHHHHHHHHHTTCCCCCCCTTCEEEECSSSEEEEEECCHHHHHHTTCCEEEEEEEGGGCHHHHHTTCCCCE
T ss_pred CcccHHHHHHHHHHHHHHHcCCCcccCCCCCCEEEecCCceEEEecCHHHHHhcCCCeEEEEEecccchhhhhcCCCcEE
Confidence 99999999999999999999876567788899999999999999999999999999999999998888887776778899
Q ss_pred EEEEEECCCCeEEEEEEEcCChHHHHHHHHHHhcCC
Q 011787 438 VKILAEKETDKILGVHIMAPNAGELIHEAAMATHDK 473 (477)
Q Consensus 438 ~k~~~~~~~~~i~G~~~~g~~~~~~~~~~~~~~~~~ 473 (477)
+|+++|+++++|+|++++|+++.|+|+.+++||.++
T Consensus 393 ~kl~~~~~~~~ilG~~~~g~~a~~~i~~~~~~i~~~ 428 (467)
T 1zk7_A 393 IKLVIEEGSHRLIGVQAVAPEAGELIQTAALAIRNR 428 (467)
T ss_dssp EEEEEETTTCBEEEEEEEETTHHHHHHHHHHHHHTT
T ss_pred EEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHCC
Confidence 999999989999999999999999999999999854
No 25
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=100.00 E-value=2.1e-64 Score=507.70 Aligned_cols=421 Identities=50% Similarity=0.831 Sum_probs=375.0
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCeEEEEecCCCCCceeeccCccCchhhhhhhHHHHHHHhhhhhCCccccccccChH
Q 011787 43 ENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSVEVDLP 122 (477)
Q Consensus 43 ~~dvvIIGgG~AGl~aA~~l~~~g~~V~lie~~~~~GG~~~~~~~~p~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 122 (477)
++||+||||||||++||.+|++.|++|+|||+++.+||+|.+.+|+|++.++.....++.... ..+++.......++.
T Consensus 1 ~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~~GG~~~~~g~~p~k~l~~~~~~~~~~~~--~~~g~~~~~~~~~~~ 78 (455)
T 2yqu_A 1 MYDLLVIGAGPGGYVAAIRAAQLGMKVGVVEKEKALGGTCLRVGCIPSKALLETTERIYEAKK--GLLGAKVKGVELDLP 78 (455)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSSHHHHHHSHHHHHHHHHHHHHHHHHHH--CCTTEEECCEEECHH
T ss_pred CCCEEEECCChhHHHHHHHHHHCCCeEEEEeCCCCCCCccceecchhHHHHHHHHHHHHHHhh--hcCCcccCCCccCHH
Confidence 379999999999999999999999999999998899999999999999998887776666543 556776555678899
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhCCeEEEEeEEEEecCCEEEEEecCCceEEEEecEEEEccCCCCCCCCCCccCCceEe
Q 011787 123 AMMAQKDKAVSNLTRGIEGLFKKNKVTYVKGYGKFISPSEVSVDTIEGGNTVVKGKNIIIATGSDVKSLPGITIDEKRIV 202 (477)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~v~~~~g~~~~i~~d~lvlAtG~~~~~~~g~~~~~~~~~ 202 (477)
.+..+.....+.+...+...+++.+++++.+++.+++++.+.+.+ +| .++.||+||+|||++|..+|..+.+...++
T Consensus 79 ~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~g~~~~i~~~~~~v~~-~g--~~~~~d~lviAtG~~p~~~~~~g~~~~~v~ 155 (455)
T 2yqu_A 79 ALMAHKDKVVQANTQGVEFLFKKNGIARHQGTARFLSERKVLVEE-TG--EELEARYILIATGSAPLIPPWAQVDYERVV 155 (455)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTCEEEESCEEESSSSEEEETT-TC--CEEEEEEEEECCCEEECCCTTBCCCSSSEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEEecCCeEEEee-CC--EEEEecEEEECCCCCCCCCCCCCCCcCcEe
Confidence 998888888877777777788888999999998888888888876 55 689999999999998866554443444688
Q ss_pred cchhhhcccCCCCeeEEEcccHHHHHHHHHHHHcCCcEEEEEeCCCcCCCCCHHHHHHHHHHHHhcCcEEEeCceEEEEE
Q 011787 203 SSTGALALNEVPKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIVPSMDGEIRKQFQRSLEKQKMKFMLKTKVVGVD 282 (477)
Q Consensus 203 ~~~~~~~~~~~~~~v~IiG~G~~g~e~a~~l~~~g~~Vtli~~~~~~~~~~~~~~~~~~~~~l~~~gv~~~~~~~v~~i~ 282 (477)
+.+++..+...+++++|||+|++|+|+|..|++.|.+|+++++.+.++|.+++++.+.+.+.+++.||+++++++|++++
T Consensus 156 ~~~~~~~~~~~~~~vvIiGgG~~g~e~A~~l~~~g~~V~lv~~~~~~l~~~~~~~~~~l~~~l~~~Gv~i~~~~~V~~i~ 235 (455)
T 2yqu_A 156 TSTEALSFPEVPKRLIVVGGGVIGLELGVVWHRLGAEVIVLEYMDRILPTMDLEVSRAAERVFKKQGLTIRTGVRVTAVV 235 (455)
T ss_dssp CHHHHTCCSSCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCTTSCHHHHHHHHHHHHHHTCEEECSCCEEEEE
T ss_pred chHHhhccccCCCeEEEECCCHHHHHHHHHHHHcCCEEEEEecCCccccccCHHHHHHHHHHHHHCCCEEEECCEEEEEE
Confidence 88888888778999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred EcCCeEEEEEeecCCCceEEEEcCEEEEeecCCCCCCCCCccccceeecCCCCeecCCCCCCCCCCeEEecccCCCCCch
Q 011787 283 LSGDGVKLTLEPAAGGEKTILEADVVLVSAGRTPFTAGLGLDKIGVETDKMGRIPVNERFATNIPGVYAIGDVIPGPMLA 362 (477)
Q Consensus 283 ~~~~~~~v~~~~~~~~~~~~i~~D~vi~a~G~~p~~~~l~~~~~gl~~~~~g~i~vd~~l~t~~~~vya~GD~~~~~~~~ 362 (477)
.+++++.+++. +++++++|.||+|+|++|+...+.++..|+.++++|++.||+++||+.|+|||+|||++.+.++
T Consensus 236 ~~~~~v~v~~~-----~g~~i~~D~vv~A~G~~p~~~~l~~~~~g~~~~~~g~i~vd~~~~t~~~~iya~GD~~~~~~~~ 310 (455)
T 2yqu_A 236 PEAKGARVELE-----GGEVLEADRVLVAVGRRPYTEGLSLENAGLSTDERGRIPVDEHLRTRVPHIYAIGDVVRGPMLA 310 (455)
T ss_dssp EETTEEEEEET-----TSCEEEESEEEECSCEEECCTTCCGGGGTCCCCTTSCCCCCTTSBCSSTTEEECGGGSSSCCCH
T ss_pred EeCCEEEEEEC-----CCeEEEcCEEEECcCCCcCCCCCChhhcCCccCCCCcEeECCCcccCCCCEEEEecCCCCccCH
Confidence 87777766654 4568999999999999999987656788999888899999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHcCCCCCCCCCCCceEEEcCCCeeeecCCHHHHHHcCCCEEEEEEecCccccchhcCCCceEEEEEE
Q 011787 363 HKAEEDGVACVEFLAGKHGHVDYDKVPGVVYTHPEVASVGKTEEQVKELGVEYRVGKFPFLANSRAKAIDDAEGIVKILA 442 (477)
Q Consensus 363 ~~A~~~g~~aa~~i~~~~~~~~~~~~p~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~ 442 (477)
+.|..||+.+|+||++....+++..+|++.|++|+++++|+++++++..|+++++...++....++...+++++++|+++
T Consensus 311 ~~A~~~g~~aa~~i~~~~~~~~~~~~p~~~~~~~~~a~~G~~~~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~ 390 (455)
T 2yqu_A 311 HKASEEGIAAVEHMVRGFGHVDYQAIPSVVYTHPEIAAVGYTEEELKAQGIPYKVGKFPYSASGRARAMGETEGFIKVLA 390 (455)
T ss_dssp HHHHHHHHHHHHHHHHSCCCCCGGGCCEEECSSSEEEEEECCHHHHHHHTCCEEEEEEEGGGCHHHHHHTCCCCEEEEEE
T ss_pred HHHHHhHHHHHHHHcCCCccCCCCCCCEEEEcCCceEEEECCHHHHHHcCCCEEEEEEEcccchHHHhcCCCcEEEEEEE
Confidence 99999999999999987666777888999999999999999999999999999999999988888877777889999999
Q ss_pred ECCCCeEEEEEEEcCChHHHHHHHHHHhcCC
Q 011787 443 EKETDKILGVHIMAPNAGELIHEAAMATHDK 473 (477)
Q Consensus 443 ~~~~~~i~G~~~~g~~~~~~~~~~~~~~~~~ 473 (477)
|+++++|+|++++|+.+.|+|+.+++||.++
T Consensus 391 ~~~~~~ilG~~~~g~~a~~~i~~~~~ai~~~ 421 (455)
T 2yqu_A 391 HAKTDRILGVHGIGARVGDVLAEAALALFFK 421 (455)
T ss_dssp ETTTCBEEEEEEEETTHHHHHHHHHHHHHTT
T ss_pred ECCCCEEEEEEEECCCHHHHHHHHHHHHHCC
Confidence 9889999999999999999999999999754
No 26
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=100.00 E-value=6.7e-64 Score=503.94 Aligned_cols=417 Identities=31% Similarity=0.536 Sum_probs=363.3
Q ss_pred CCCCcEEEECCChHHHHHHHHHHHCCCeEEEEecCCCCCceeeccCccCchhhhhhhHHHHHHHhhhhhCCccccccccC
Q 011787 41 SDENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSVEVD 120 (477)
Q Consensus 41 ~~~~dvvIIGgG~AGl~aA~~l~~~g~~V~lie~~~~~GG~~~~~~~~p~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~~ 120 (477)
+.++||+|||||+||++||.+|++.|++|+|||++ .+||+|.+.+|+|++.++.....+.... ....+++.......+
T Consensus 2 ~~~~dVvIIGgG~aGl~aA~~l~~~g~~V~liE~~-~~GG~~~~~gciP~k~l~~~a~~~~~~~-~~~~~g~~~~~~~~~ 79 (463)
T 2r9z_A 2 TQHFDLIAIGGGSGGLAVAEKAAAFGKRVALIESK-ALGGTCVNVGCVPKKVMWYASHLAEAVR-DAPGFGVQASGGTLD 79 (463)
T ss_dssp CCCEEEEEECCSHHHHHHHHHHHHTTCCEEEEESS-CTTHHHHHHSHHHHHHHHHHHHHHHHHH-HGGGGTBCCC---CC
T ss_pred CccCcEEEECCCHHHHHHHHHHHhCCCcEEEEcCC-CCCCcCcCcCchhHHHHHHHHHHHHHHh-hhhhcCcccCCCCcC
Confidence 34689999999999999999999999999999996 8999999999999998877766655544 345567665556788
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhhhCCeEEEEeEEEEecCCEEEEEecCCceEEEEecEEEEccCCCCCCC--CCCccCC
Q 011787 121 LPAMMAQKDKAVSNLTRGIEGLFKKNKVTYVKGYGKFISPSEVSVDTIEGGNTVVKGKNIIIATGSDVKSL--PGITIDE 198 (477)
Q Consensus 121 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~v~~~~g~~~~i~~d~lvlAtG~~~~~~--~g~~~~~ 198 (477)
|..+..+.......+...+...+.+.+++++.+++.+++...+.+ +| .++.||+||||||++|..+ |+.
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~g~~~~i~~~~v~~---~g--~~~~~d~lviAtGs~p~~p~i~G~---- 150 (463)
T 2r9z_A 80 WPRLVAGRDRYIGAINSFWDGYVERLGITRVDGHARFVDAHTIEV---EG--QRLSADHIVIATGGRPIVPRLPGA---- 150 (463)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEESCEEEEETTEEEE---TT--EEEEEEEEEECCCEEECCCSCTTG----
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEeEEEEccCCEEEE---CC--EEEEcCEEEECCCCCCCCCCCCCc----
Confidence 999999988888888888888888899999999888888776655 55 6799999999999988543 443
Q ss_pred ceEecchhhhcccCCCCeeEEEcccHHHHHHHHHHHHcCCcEEEEEeCCCcCCCCCHHHHHHHHHHHHhcCcEEEeCceE
Q 011787 199 KRIVSSTGALALNEVPKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIVPSMDGEIRKQFQRSLEKQKMKFMLKTKV 278 (477)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~v~IiG~G~~g~e~a~~l~~~g~~Vtli~~~~~~~~~~~~~~~~~~~~~l~~~gv~~~~~~~v 278 (477)
..+++++++..+...+++++|||+|.+|+|+|..|++.|.+|+++++.+++++.+++++.+.+.+.+++.||+++++++|
T Consensus 151 ~~~~~~~~~~~~~~~~~~vvVvGgG~~g~e~A~~l~~~G~~Vtlv~~~~~~l~~~~~~~~~~l~~~l~~~gv~i~~~~~v 230 (463)
T 2r9z_A 151 ELGITSDGFFALQQQPKRVAIIGAGYIGIELAGLLRSFGSEVTVVALEDRLLFQFDPLLSATLAENMHAQGIETHLEFAV 230 (463)
T ss_dssp GGSBCHHHHHHCSSCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSTTSCHHHHHHHHHHHHHTTCEEESSCCE
T ss_pred cceecHHHHhhhhccCCEEEEECCCHHHHHHHHHHHhcCCEEEEEEcCCccccccCHHHHHHHHHHHHHCCCEEEeCCEE
Confidence 23667788888878899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEEcCCeEEEEEeecCCCceE-EEEcCEEEEeecCCCCCCCCCccccceeecCCCCeecCCCCCCCCCCeEEecccCC
Q 011787 279 VGVDLSGDGVKLTLEPAAGGEKT-ILEADVVLVSAGRTPFTAGLGLDKIGVETDKMGRIPVNERFATNIPGVYAIGDVIP 357 (477)
Q Consensus 279 ~~i~~~~~~~~v~~~~~~~~~~~-~i~~D~vi~a~G~~p~~~~l~~~~~gl~~~~~g~i~vd~~l~t~~~~vya~GD~~~ 357 (477)
++++.+++++.+++. +++ ++++|.|++|+|++|+++.+.++++|++++++|+|.||+++||+.|+|||+|||++
T Consensus 231 ~~i~~~~~~~~v~~~-----~G~~~i~~D~vv~a~G~~p~~~~l~~~~~g~~~~~~G~i~vd~~~~t~~~~Iya~GD~~~ 305 (463)
T 2r9z_A 231 AALERDAQGTTLVAQ-----DGTRLEGFDSVIWAVGRAPNTRDLGLEAAGIEVQSNGMVPTDAYQNTNVPGVYALGDITG 305 (463)
T ss_dssp EEEEEETTEEEEEET-----TCCEEEEESEEEECSCEEESCTTSCHHHHTCCCCTTSCCCCCTTSBCSSTTEEECGGGGT
T ss_pred EEEEEeCCeEEEEEe-----CCcEEEEcCEEEECCCCCcCCCCCCchhcCCccCCCCCEeECCCCccCCCCEEEEeecCC
Confidence 999877666666654 445 89999999999999999865567889999989999999999999999999999999
Q ss_pred CCCchhHHHHHHHHHHHHHcCCC-CC-CCCCCCceEEEcCCCeeeecCCHHHHHHc-CCCEEEEEEecCccccchhcCCC
Q 011787 358 GPMLAHKAEEDGVACVEFLAGKH-GH-VDYDKVPGVVYTHPEVASVGKTEEQVKEL-GVEYRVGKFPFLANSRAKAIDDA 434 (477)
Q Consensus 358 ~~~~~~~A~~~g~~aa~~i~~~~-~~-~~~~~~p~~~~~~~~~~~~G~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 434 (477)
.+.+++.|..||+.+|.||++.. .. .++..+|+++|++|+++++|++++++... |.++.+...++....++...+.+
T Consensus 306 ~~~~~~~A~~~g~~aa~~i~g~~~~~~~~~~~~p~~~~~~~~~a~vGl~e~~a~~~~g~~~~~~~~~~~~~~~~~~~~~~ 385 (463)
T 2r9z_A 306 RDQLTPVAIAAGRRLAERLFDGQSERKLDYDNIPTVVFAHPPLSKVGLSEPEARERLGDVLTVYETSFTPMRYALNEHGP 385 (463)
T ss_dssp SCCCHHHHHHHHHHHHHHHHSCCTTCCCCCSSCCEEECCSSCEEEEECCHHHHHHHHCSCEEEEEEEECCGGGTTSSSCC
T ss_pred CcccHHHHHHHHHHHHHHHcCCCCcccCCCCCCCEEEeCCCCeEEEcCCHHHHHhcCCCCEEEEEEEcccchhhhhcCCC
Confidence 89999999999999999999754 33 57888999999999999999999999876 67888888888887777766678
Q ss_pred ceEEEEEEECCCCeEEEEEEEcCChHHHHHHHHHHhcCC
Q 011787 435 EGIVKILAEKETDKILGVHIMAPNAGELIHEAAMATHDK 473 (477)
Q Consensus 435 ~~~~k~~~~~~~~~i~G~~~~g~~~~~~~~~~~~~~~~~ 473 (477)
.+|+|+++|+++++|+|+|++|+++.|+|+.+++||..+
T Consensus 386 ~~~~klv~~~~~~~ilG~~~~g~~a~~~i~~~~~ai~~~ 424 (463)
T 2r9z_A 386 KTAMKLVCAGPEQRVVGVHVIGDGADEMLQGFAVAVKMG 424 (463)
T ss_dssp CEEEEEEEETTTTEEEEEEEESTTGGGTSHHHHHHHHTT
T ss_pred cEEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHCC
Confidence 899999999999999999999999999999999999754
No 27
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=100.00 E-value=3.5e-64 Score=505.61 Aligned_cols=418 Identities=39% Similarity=0.651 Sum_probs=368.5
Q ss_pred CCCcEEEECCChHHHHHHHHHHHCCCeEEEEecCCCCCceeeccCccCchhhhhhhHHHHHHHhhhhh---CCccccccc
Q 011787 42 DENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFAS---HGVKFSSVE 118 (477)
Q Consensus 42 ~~~dvvIIGgG~AGl~aA~~l~~~g~~V~lie~~~~~GG~~~~~~~~p~~~l~~~~~~~~~~~~~~~~---~g~~~~~~~ 118 (477)
.++||+|||||+||++||.+|++.|++|+|||+ +.+||+|.+.+|+|++.++.....++... .+.. +|+......
T Consensus 4 ~~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~-~~~GG~~~~~g~~Psk~l~~~~~~~~~~~-~~~~~~~~g~~~~~~~ 81 (458)
T 1lvl_A 4 IQTTLLIIGGGPGGYVAAIRAGQLGIPTVLVEG-QALGGTCLNIGCIPSKALIHVAEQFHQAS-RFTEPSPLGISVASPR 81 (458)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHHTCCEEEECS-SCTTHHHHHHSHHHHHHHHHHHHHHHHHH-HTTSCCTTCCCCCCCC
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCEEEEEcc-CCCCCcCCCcCcHhHHHHHHHHHHHHHHh-hcccccccCcccCCCc
Confidence 358999999999999999999999999999999 78999999999999999888777776655 3444 677766667
Q ss_pred cChHHHHHHHHHHHHHHHHHHHHHhhhCCeEEEEeEEEEecCCEEEEEecCCceEEEEecEEEEccCCCCCCCCCCccCC
Q 011787 119 VDLPAMMAQKDKAVSNLTRGIEGLFKKNKVTYVKGYGKFISPSEVSVDTIEGGNTVVKGKNIIIATGSDVKSLPGITIDE 198 (477)
Q Consensus 119 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~v~~~~g~~~~i~~d~lvlAtG~~~~~~~g~~~~~ 198 (477)
+++..+..+..+..+.+...+..++++.+++++.+++.+++.+.+.+. + .++.||+||||||++|..+|+++.+.
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~g~~~~~~~~~v~v~--~---~~~~~d~lviATGs~p~~~~~~~~~~ 156 (458)
T 1lvl_A 82 LDIGQSVAWKDGIVDRLTTGVAALLKKHGVKVVHGWAKVLDGKQVEVD--G---QRIQCEHLLLATGSSSVELPMLPLGG 156 (458)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEECSCEEEEETTEEEET--T---EEEECSEEEECCCEEECCBTTBCCBT
T ss_pred cCHHHHHHHHHHHHHHHHHHHHHHHHhCCcEEEEEEEEEccCCEEEEe--e---EEEEeCEEEEeCCCCCCCCCCCCccC
Confidence 899999999998888888888888899999999998888877665552 2 67999999999999987666544333
Q ss_pred ceEecchhhhcccCCCCeeEEEcccHHHHHHHHHHHHcCCcEEEEEeCCCcCCCCCHHHHHHHHHHHHhcCcEEEeCceE
Q 011787 199 KRIVSSTGALALNEVPKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIVPSMDGEIRKQFQRSLEKQKMKFMLKTKV 278 (477)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~v~IiG~G~~g~e~a~~l~~~g~~Vtli~~~~~~~~~~~~~~~~~~~~~l~~~gv~~~~~~~v 278 (477)
.+++..+...+...+++++|||+|++|+|+|..|++.|.+|+++++.+++++.+++++.+.+.+.+++.||+++++++|
T Consensus 157 -~v~~~~~~~~~~~~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~l~~~l~~~gv~i~~~~~v 235 (458)
T 1lvl_A 157 -PVISSTEALAPKALPQHLVVVGGGYIGLELGIAYRKLGAQVSVVEARERILPTYDSELTAPVAESLKKLGIALHLGHSV 235 (458)
T ss_dssp -TEECHHHHTCCSSCCSEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSSSTTSCHHHHHHHHHHHHHHTCEEETTCEE
T ss_pred -cEecHHHHhhhhccCCeEEEECcCHHHHHHHHHHHHCCCeEEEEEcCCccccccCHHHHHHHHHHHHHCCCEEEECCEE
Confidence 5788888888888899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEEcCCeEEEEEeecCCCceEEEEcCEEEEeecCCCCCCCCCccccceeecCCCCeecCCCCCCCCCCeEEecccCCC
Q 011787 279 VGVDLSGDGVKLTLEPAAGGEKTILEADVVLVSAGRTPFTAGLGLDKIGVETDKMGRIPVNERFATNIPGVYAIGDVIPG 358 (477)
Q Consensus 279 ~~i~~~~~~~~v~~~~~~~~~~~~i~~D~vi~a~G~~p~~~~l~~~~~gl~~~~~g~i~vd~~l~t~~~~vya~GD~~~~ 358 (477)
++++. + .+.++ . .+++..++++|.|++|+|++||...+.++..|+.++++ +|.||+++||+.|+|||+|||++.
T Consensus 236 ~~i~~-~-~v~v~--~-~~G~~~~i~~D~vv~a~G~~p~~~~l~~~~~g~~~~~~-~i~vd~~~~t~~~~Iya~GD~~~~ 309 (458)
T 1lvl_A 236 EGYEN-G-CLLAN--D-GKGGQLRLEADRVLVAVGRRPRTKGFNLECLDLKMNGA-AIAIDERCQTSMHNVWAIGDVAGE 309 (458)
T ss_dssp EEEET-T-EEEEE--C-SSSCCCEECCSCEEECCCEEECCSSSSGGGSCCCEETT-EECCCTTCBCSSTTEEECGGGGCS
T ss_pred EEEEe-C-CEEEE--E-CCCceEEEECCEEEECcCCCcCCCCCCcHhcCCcccCC-EEeECCCCcCCCCCEEEeeccCCC
Confidence 99976 3 34443 1 22333689999999999999999876568889998877 899999999999999999999999
Q ss_pred CCchhHHHHHHHHHHHHHcCCCCCCCCCCCceEEEcCCCeeeecCCHHHHHHcCCCEEEEEEecCccccchhcCCCceEE
Q 011787 359 PMLAHKAEEDGVACVEFLAGKHGHVDYDKVPGVVYTHPEVASVGKTEEQVKELGVEYRVGKFPFLANSRAKAIDDAEGIV 438 (477)
Q Consensus 359 ~~~~~~A~~~g~~aa~~i~~~~~~~~~~~~p~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 438 (477)
+.+++.|..||+.||.||++....+++..+|++.|++|+++++|+++++++..|+++.+..+++....++...+++.+|+
T Consensus 310 ~~~~~~A~~~g~~aa~~i~g~~~~~~~~~~p~~~~~~p~~a~vG~~e~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~ 389 (458)
T 1lvl_A 310 PMLAHRAMAQGEMVAEIIAGKARRFEPAAIAAVCFTDPEVVVVGKTPEQASQQGLDCIVAQFPFAANGRAMSLESKSGFV 389 (458)
T ss_dssp SCCHHHHHHHHHHHHHHHTTCCCCCCCSCCCEEECSSSEEEEEECCHHHHHHTTCCEEEEEEEGGGCHHHHHTTCCCCEE
T ss_pred cccHHHHHHHHHHHHHHhcCCCccCCCCCCCEEEECCCCeEEEeCCHHHHHHcCCCEEEEEEECccchhhhhcCCCcEEE
Confidence 99999999999999999998766677888999999999999999999999999999999999988888877777788999
Q ss_pred EEEEECCCCeEEEEEEEcCChHHHHHHHHHHhcCC
Q 011787 439 KILAEKETDKILGVHIMAPNAGELIHEAAMATHDK 473 (477)
Q Consensus 439 k~~~~~~~~~i~G~~~~g~~~~~~~~~~~~~~~~~ 473 (477)
|+++|+++++|+|++++|+++.|+|+.+++||.++
T Consensus 390 kl~~d~~~~~ilG~~~vg~~a~e~i~~~~~ai~~~ 424 (458)
T 1lvl_A 390 RVVARRDNHLILGWQAVGVAVSELSTAFAQSLEMG 424 (458)
T ss_dssp EEEEETTTCBEEEEEEEETTGGGHHHHHHHHHHHT
T ss_pred EEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHCC
Confidence 99999989999999999999999999999999743
No 28
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=100.00 E-value=1.5e-63 Score=505.00 Aligned_cols=425 Identities=28% Similarity=0.438 Sum_probs=363.2
Q ss_pred CCCcEEEECCChHHHHHHHHHHHCCCeEEEEecC-------C--CCCceeeccCccCchhhhhhhHHHHHHHhhhhhCCc
Q 011787 42 DENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKR-------G--ALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGV 112 (477)
Q Consensus 42 ~~~dvvIIGgG~AGl~aA~~l~~~g~~V~lie~~-------~--~~GG~~~~~~~~p~~~l~~~~~~~~~~~~~~~~~g~ 112 (477)
.+|||+||||||||++||.+|++.|++|+|||+. . .+||+|.+.+|+|++.++.......... ....+++
T Consensus 8 ~~~DvvVIGgG~aGl~aA~~la~~G~~V~liEk~~~~~~~~~~~~~GG~c~~~gciPsk~l~~~~~~~~~~~-~~~~~g~ 86 (483)
T 3dgh_A 8 YDYDLIVIGGGSAGLACAKEAVLNGARVACLDFVKPTPTLGTKWGVGGTCVNVGCIPKKLMHQASLLGEAVH-EAAAYGW 86 (483)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHHTTCCEEEECCCCCCTTTTCCCCSSCHHHHHSHHHHHHHHHHHHHHHHHH-HHHHTTB
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCEEEEEEeccccccccccCCcCCeecccCchhhHHHHHHHHHHHHHH-HHHhcCc
Confidence 4699999999999999999999999999999942 1 3899999999999998877776655443 3566777
Q ss_pred cccc-cccChHHHHHHHHHHHHHHHHHHHHHhhhCCeEEEEeEEEEecCCEEEEEecCCceEEEEecEEEEccCCCCCCC
Q 011787 113 KFSS-VEVDLPAMMAQKDKAVSNLTRGIEGLFKKNKVTYVKGYGKFISPSEVSVDTIEGGNTVVKGKNIIIATGSDVKSL 191 (477)
Q Consensus 113 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~v~~~~g~~~~i~~d~lvlAtG~~~~~~ 191 (477)
.... ..++|..+..+.....+.+...+...+++.+++++.+.+.+++++.+.+.+.+|. ..+.||+||||||++|..+
T Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~a~~~~~~~v~v~~~~g~-~~~~~d~lviATGs~p~~p 165 (483)
T 3dgh_A 87 NVDDKIKPDWHKLVQSVQNHIKSVNWVTRVDLRDKKVEYINGLGSFVDSHTLLAKLKSGE-RTITAQTFVIAVGGRPRYP 165 (483)
T ss_dssp CCCCCCCBCHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEECSEEEEEETTEEEEECTTCC-EEEEEEEEEECCCEEECCC
T ss_pred ccCCcCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEEccCCEEEEEeCCCe-EEEEcCEEEEeCCCCcCCC
Confidence 6643 5789999999999988888877878888899999999999999999999887774 6799999999999988643
Q ss_pred --CCCccCCceEecchhhhcccCCCCeeEEEcccHHHHHHHHHHHHcCCcEEEEEeCCCcCCCCCHHHHHHHHHHHHhcC
Q 011787 192 --PGITIDEKRIVSSTGALALNEVPKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIVPSMDGEIRKQFQRSLEKQK 269 (477)
Q Consensus 192 --~g~~~~~~~~~~~~~~~~~~~~~~~v~IiG~G~~g~e~a~~l~~~g~~Vtli~~~~~~~~~~~~~~~~~~~~~l~~~g 269 (477)
|+.. ...++++++..+...+++++|||+|++|+|+|..|++.|.+|+++++ +.+++.+++++.+.+.+.++++|
T Consensus 166 ~i~G~~---~~~~~~~~~~~~~~~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~-~~~l~~~d~~~~~~l~~~l~~~G 241 (483)
T 3dgh_A 166 DIPGAV---EYGITSDDLFSLDREPGKTLVVGAGYIGLECAGFLKGLGYEPTVMVR-SIVLRGFDQQMAELVAASMEERG 241 (483)
T ss_dssp SSTTHH---HHCBCHHHHTTCSSCCCEEEEECCSHHHHHHHHHHHHTTCEEEEEES-SCSSTTSCHHHHHHHHHHHHHTT
T ss_pred CCCCcc---cccCcHHHHhhhhhcCCcEEEECCCHHHHHHHHHHHHcCCEEEEEeC-CCCCcccCHHHHHHHHHHHHhCC
Confidence 4432 23567888888888899999999999999999999999999999988 46788999999999999999999
Q ss_pred cEEEeCceEEEEEEcCC-eEEEEEeecCCCceEEEEcCEEEEeecCCCCCCCCCccccceeecCCCCeecCCCCCCCCCC
Q 011787 270 MKFMLKTKVVGVDLSGD-GVKLTLEPAAGGEKTILEADVVLVSAGRTPFTAGLGLDKIGVETDKMGRIPVNERFATNIPG 348 (477)
Q Consensus 270 v~~~~~~~v~~i~~~~~-~~~v~~~~~~~~~~~~i~~D~vi~a~G~~p~~~~l~~~~~gl~~~~~g~i~vd~~l~t~~~~ 348 (477)
|++++++.+.+++..++ .+.+++.+..+++..++++|.|++|+|++|+++.+.++..|+++++ |+|.||+++||++|+
T Consensus 242 v~i~~~~~v~~i~~~~~~~~~v~~~~~~~~~~~~~~~D~vi~a~G~~p~~~~l~l~~~gl~~~~-G~i~vd~~~~t~~~~ 320 (483)
T 3dgh_A 242 IPFLRKTVPLSVEKQDDGKLLVKYKNVETGEESEDVYDTVLWAIGRKGLVDDLNLPNAGVTVQK-DKIPVDSQEATNVAN 320 (483)
T ss_dssp CCEEETEEEEEEEECTTSCEEEEEEETTTCCEEEEEESEEEECSCEEECCGGGTGGGTTCCCBT-TBBCCCTTCBCSSTT
T ss_pred CEEEeCCEEEEEEEcCCCcEEEEEecCCCCceeEEEcCEEEECcccccCcCcCCchhcCccccC-CEEEECcCCccCCCC
Confidence 99999999999987544 4667776544455568999999999999999988767889999998 999999999999999
Q ss_pred eEEecccC-CCCCchhHHHHHHHHHHHHHcCCC-CCCCCCCCceEEEcCCCeeeecCCHHHHHHc-C-CCEEEEEEecCc
Q 011787 349 VYAIGDVI-PGPMLAHKAEEDGVACVEFLAGKH-GHVDYDKVPGVVYTHPEVASVGKTEEQVKEL-G-VEYRVGKFPFLA 424 (477)
Q Consensus 349 vya~GD~~-~~~~~~~~A~~~g~~aa~~i~~~~-~~~~~~~~p~~~~~~~~~~~~G~~~~~~~~~-~-~~~~~~~~~~~~ 424 (477)
|||+|||+ +.|.+++.|..||++||+||++.. ...++..+|+++|++|+++++|+||+||++. + ..+.+...++..
T Consensus 321 IyA~GD~~~~~~~~~~~A~~~g~~aa~~i~g~~~~~~~~~~~p~~~~~~p~~a~vGlte~~a~~~~~~~~~~~~~~~~~~ 400 (483)
T 3dgh_A 321 IYAVGDIIYGKPELTPVAVLAGRLLARRLYGGSTQRMDYKDVATTVFTPLEYACVGLSEEDAVKQFGADEIEVFHGYYKP 400 (483)
T ss_dssp EEECSTTBTTSCCCHHHHHHHHHHHHHHHHSCCCCCCCCTTCCEEECSSSEEEEEECCHHHHHHHHCGGGEEEEEEECCC
T ss_pred EEEEEcccCCCCccHHHHHHHHHHHHHHHcCCCCCcCCCCCCCEEEECCCccEEEeCCHHHHHhhCCCCCEEEEEEeecc
Confidence 99999998 678899999999999999999865 3467889999999999999999999999875 3 356666655554
Q ss_pred cccchh-cCCCceEEEEEEECC-CCeEEEEEEEcCChHHHHHHHHHHhcCC
Q 011787 425 NSRAKA-IDDAEGIVKILAEKE-TDKILGVHIMAPNAGELIHEAAMATHDK 473 (477)
Q Consensus 425 ~~~~~~-~~~~~~~~k~~~~~~-~~~i~G~~~~g~~~~~~~~~~~~~~~~~ 473 (477)
..+... .+.+++|+|+++|++ |++|||+|++|++|.|+|+.+++||.++
T Consensus 401 ~~~~~~~~~~~~~~~k~i~~~~~~~~ilG~~~~g~~a~e~i~~~~~ai~~~ 451 (483)
T 3dgh_A 401 TEFFIPQKSVRYCYLKAVAERHGDQRVYGLHYIGPVAGEVIQGFAAALKSG 451 (483)
T ss_dssp GGGTTTTCCCTTCEEEEEEESSTTCBEEEEEEEETTHHHHHHHHHHHHHTT
T ss_pred hhhhhhccCCCcEEEEEEEecCCCCEEEEEEEECCCHHHHHHHHHHHHHCC
Confidence 433221 235689999999986 8999999999999999999999999854
No 29
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=100.00 E-value=2.7e-62 Score=496.95 Aligned_cols=417 Identities=27% Similarity=0.448 Sum_probs=346.1
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCeEEEEecCCCCCceeeccCccCchhhhhhhHHHHHHHhhhhhCCccccccccChH
Q 011787 43 ENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSVEVDLP 122 (477)
Q Consensus 43 ~~dvvIIGgG~AGl~aA~~l~~~g~~V~lie~~~~~GG~~~~~~~~p~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 122 (477)
++||+|||||+||++||.+|++.|++|+|||++ .+||+|.+.+|+|++.++.......... ....+++... ..++|.
T Consensus 2 ~~dVvIIGgG~aGl~aA~~l~~~g~~V~liE~~-~~GG~c~~~gc~P~k~l~~~a~~~~~~~-~~~~~g~~~~-~~~~~~ 78 (500)
T 1onf_A 2 VYDLIVIGGGSGGMAAARRAARHNAKVALVEKS-RLGGTCVNVGCVPKKIMFNAASVHDILE-NSRHYGFDTK-FSFNLP 78 (500)
T ss_dssp CBSEEEECCSHHHHHHHHHHHHTTCCEEEEESS-STTHHHHHTSHHHHHHHHHHHHHHHHHH-HGGGGTCCCC-CCCCHH
T ss_pred ccCEEEECCCHHHHHHHHHHHHCCCcEEEEeCC-CcCccccccCCcchHHHHHHHHHHHHHH-hhHhcCCccC-CccCHH
Confidence 489999999999999999999999999999996 6999999999999998876665554443 3455666544 567899
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhCCeEEEEeEEEEecCCEEEEEec---------CCceEEEEecEEEEccCCCCCCC--
Q 011787 123 AMMAQKDKAVSNLTRGIEGLFKKNKVTYVKGYGKFISPSEVSVDTI---------EGGNTVVKGKNIIIATGSDVKSL-- 191 (477)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~v~~~---------~g~~~~i~~d~lvlAtG~~~~~~-- 191 (477)
.+..+.......+...+...+++.+++++.+++.+++.+.+.+... ++...++.||+||||||++|..+
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~g~~~~id~~~v~v~~~~~~~~~~~~~~~~~~~~~d~lViAtGs~p~~p~i 158 (500)
T 1onf_A 79 LLVERRDKYIQRLNNIYRQNLSKDKVDLYEGTASFLSENRILIKGTKDNNNKDNGPLNEEILEGRNILIAVGNKPVFPPV 158 (500)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTCEEEESCCCCC--------------------------CBSSEEECCCCCBCCCSC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEEeeCCEEEEEeccccccccccCCCceEEEeCEEEECCCCCCCCCCC
Confidence 9988888888888877888888899999999877777655555320 11125799999999999998543
Q ss_pred CCCccCCceEecchhhhcccCCCCeeEEEcccHHHHHHHHHHHHcCCcEEEEEeCCCcCCCCCHHHHHHHHHHHHhcCcE
Q 011787 192 PGITIDEKRIVSSTGALALNEVPKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIVPSMDGEIRKQFQRSLEKQKMK 271 (477)
Q Consensus 192 ~g~~~~~~~~~~~~~~~~~~~~~~~v~IiG~G~~g~e~a~~l~~~g~~Vtli~~~~~~~~~~~~~~~~~~~~~l~~~gv~ 271 (477)
|+. ..+++++++..+.. +++++|||+|++|+|+|..|++.|.+|+++++.+++++.+|+++.+.+.+.|+++||+
T Consensus 159 ~G~----~~~~~~~~~~~~~~-~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~~~d~~~~~~l~~~l~~~gv~ 233 (500)
T 1onf_A 159 KGI----ENTISSDEFFNIKE-SKKIGIVGSGYIAVELINVIKRLGIDSYIFARGNRILRKFDESVINVLENDMKKNNIN 233 (500)
T ss_dssp TTG----GGCEEHHHHTTCCC-CSEEEEECCSHHHHHHHHHHHTTTCEEEEECSSSSSCTTSCHHHHHHHHHHHHHTTCE
T ss_pred CCC----CcccCHHHHhccCC-CCeEEEECChHHHHHHHHHHHHcCCeEEEEecCCccCcccchhhHHHHHHHHHhCCCE
Confidence 443 24677788877776 9999999999999999999999999999999999999999999999999999999999
Q ss_pred EEeCceEEEEEEcCC-eEEEEEeecCCCceEE-EEcCEEEEeecCCCCCCCCCccccceeecCCCCeecCCCCCCCCCCe
Q 011787 272 FMLKTKVVGVDLSGD-GVKLTLEPAAGGEKTI-LEADVVLVSAGRTPFTAGLGLDKIGVETDKMGRIPVNERFATNIPGV 349 (477)
Q Consensus 272 ~~~~~~v~~i~~~~~-~~~v~~~~~~~~~~~~-i~~D~vi~a~G~~p~~~~l~~~~~gl~~~~~g~i~vd~~l~t~~~~v 349 (477)
+++++++++++.+++ .+.+.+. ++++ +++|.|++|+|++||++.+.++.+|+++ ++|+|.||+++||+.|+|
T Consensus 234 i~~~~~v~~i~~~~~~~~~v~~~-----~g~~~~~~D~vi~a~G~~p~~~~l~~~~~g~~~-~~G~i~vd~~~~t~~~~i 307 (500)
T 1onf_A 234 IVTFADVVEIKKVSDKNLSIHLS-----DGRIYEHFDHVIYCVGRSPDTENLKLEKLNVET-NNNYIVVDENQRTSVNNI 307 (500)
T ss_dssp EECSCCEEEEEESSTTCEEEEET-----TSCEEEEESEEEECCCBCCTTTTSSCTTTTCCB-SSSCEEECTTCBCSSSSE
T ss_pred EEECCEEEEEEEcCCceEEEEEC-----CCcEEEECCEEEECCCCCcCCCCCCchhcCccc-cCCEEEECCCcccCCCCE
Confidence 999999999987643 3566654 3445 9999999999999999765568889988 789999999999999999
Q ss_pred EEecccC----------------------------------CCCCchhHHHHHHHHHHHHHcCCC-CCCCCCCCceEEEc
Q 011787 350 YAIGDVI----------------------------------PGPMLAHKAEEDGVACVEFLAGKH-GHVDYDKVPGVVYT 394 (477)
Q Consensus 350 ya~GD~~----------------------------------~~~~~~~~A~~~g~~aa~~i~~~~-~~~~~~~~p~~~~~ 394 (477)
||+|||+ +.+.+++.|..||++||+||++.. ..+++..+|+++|+
T Consensus 308 ya~GD~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~g~~~~~~~~~~~p~~~~~ 387 (500)
T 1onf_A 308 YAVGDCCMVKKSKEIEDLNLLKLYNEERYLNKKENVTEDIFYNVQLTPVAINAGRLLADRLFLKKTRKTNYKLIPTVIFS 387 (500)
T ss_dssp EECSTTEEEC------------------------------CBCCCCHHHHHHHHHHHHHHHHSCTTCCCCCSSCCEEECC
T ss_pred EEEeccccccccccccccccccccccccccccccccccccCCcccchhHHHHHHHHHHHHHhCCCCccCCCCCCCeEEEc
Confidence 9999999 567799999999999999999754 44678889999999
Q ss_pred CCCeeeecCCHHHHHHc-C-CCEEEEEEecCccccch----hcCCCceEEEEEEECCCCeEEEEEEEcCChHHHHHHHHH
Q 011787 395 HPEVASVGKTEEQVKEL-G-VEYRVGKFPFLANSRAK----AIDDAEGIVKILAEKETDKILGVHIMAPNAGELIHEAAM 468 (477)
Q Consensus 395 ~~~~~~~G~~~~~~~~~-~-~~~~~~~~~~~~~~~~~----~~~~~~~~~k~~~~~~~~~i~G~~~~g~~~~~~~~~~~~ 468 (477)
+|+++++|+++++++.. | .++.+...++....++. ..+++.+++|+++|+++++|||+|++|+++.|+|+.+++
T Consensus 388 ~~~~a~vGl~e~~a~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kli~~~~~~~ilG~~~~g~~a~~~i~~~~~ 467 (500)
T 1onf_A 388 HPPIGTIGLSEEAAIQIYGKENVKIYESKFTNLFFSVYDIEPELKEKTYLKLVCVGKDELIKGLHIIGLNADEIVQGFAV 467 (500)
T ss_dssp SSCEEEEECCHHHHHHHTCGGGEEEEEEEECCGGGTTSCSCGGGSCCEEEEEEEETTTTEEEEEEEESTTHHHHHHHHHH
T ss_pred CcceEEEeCCHHHHHhcCCCccEEEEEEECchhhhhhccccccCCCceEEEEEEECCCCEEEEEEEECCCHHHHHHHHHH
Confidence 99999999999999887 4 68888888888777766 345678999999999999999999999999999999999
Q ss_pred HhcCC
Q 011787 469 ATHDK 473 (477)
Q Consensus 469 ~~~~~ 473 (477)
||..+
T Consensus 468 ai~~~ 472 (500)
T 1onf_A 468 ALKMN 472 (500)
T ss_dssp HHHTT
T ss_pred HHHcC
Confidence 99754
No 30
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=100.00 E-value=1.1e-62 Score=502.26 Aligned_cols=418 Identities=23% Similarity=0.368 Sum_probs=345.9
Q ss_pred CCCCCCcEEEECCChHHHHHHHHHHHCCCeEEEEecCCCCCceeeccCccCchhhhhhhHHHHHHHhhhhhCCccccccc
Q 011787 39 SASDENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSVE 118 (477)
Q Consensus 39 ~~~~~~dvvIIGgG~AGl~aA~~l~~~g~~V~lie~~~~~GG~~~~~~~~p~~~l~~~~~~~~~~~~~~~~~g~~~~~~~ 118 (477)
.++.++||+|||||+||++||.+|++.|++|+|||++..+||+|.+.+|+|++.++.....+..... ...+++ +....
T Consensus 39 ~~~~~~dVvIIGgG~aGl~aA~~l~~~G~~V~liE~~~~~GG~~~~~g~~p~k~l~~~~~~~~~~~~-~~~~g~-~~~~~ 116 (523)
T 1mo9_A 39 NDPREYDAIFIGGGAAGRFGSAYLRAMGGRQLIVDRWPFLGGSCPHNACVPHHLFSDCAAELMLART-FSGQYW-FPDMT 116 (523)
T ss_dssp TCCSCBSEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSSCHHHHHSHHHHHHHHHHHHHHHHHHH-TTTSTT-CCCCT
T ss_pred CCCCcCCEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCCCCcccccCcCchHHHHHHHHHHHHHhh-hhhcCc-HHHHH
Confidence 3456799999999999999999999999999999998779999999999999988776665554432 333443 11110
Q ss_pred cChHHHHHHHHHHHHHHHHHHH---HHh-----hhCCeEEE-EeEEEEecCCEEEEEecCCceEEEEecEEEEccCCCCC
Q 011787 119 VDLPAMMAQKDKAVSNLTRGIE---GLF-----KKNKVTYV-KGYGKFISPSEVSVDTIEGGNTVVKGKNIIIATGSDVK 189 (477)
Q Consensus 119 ~~~~~~~~~~~~~~~~~~~~~~---~~~-----~~~~v~~~-~~~~~~~~~~~~~v~~~~g~~~~i~~d~lvlAtG~~~~ 189 (477)
..+ ....+....+...+. .++ ++.+++++ .+.+.+++...+.+. + ..+.||+||+|||++|.
T Consensus 117 ~~~----~~~~~~~~~l~~~~~~~~~~~~~~~~~~~gv~~~~~~~v~~i~~~~v~~~---g--~~~~~d~lViATGs~p~ 187 (523)
T 1mo9_A 117 EKV----VGIKEVVDLFRAGRNGPHGIMNFQSKEQLNLEYILNCPAKVIDNHTVEAA---G--KVFKAKNLILAVGAGPG 187 (523)
T ss_dssp TCC----CCHHHHHHHHHHHTHHHHHHHHHHHHHTSCCCEEESSCCEEEETTEEEET---T--EEEEBSCEEECCCEECC
T ss_pred hhh----hhHHHHHHHHHhhhhhhhhhhhhcccccCCcEEEEeeEEEEeeCCEEEEC---C--EEEEeCEEEECCCCCCC
Confidence 000 001222222322222 455 67799998 788888887665553 4 67999999999999886
Q ss_pred CCCCCccCCceEecchhhh-cccCCC-CeeEEEcccHHHHHHHHHHHHcCCcEEEEEeCCCcCCCCCHHHHHHHHHHHHh
Q 011787 190 SLPGITIDEKRIVSSTGAL-ALNEVP-KKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIVPSMDGEIRKQFQRSLEK 267 (477)
Q Consensus 190 ~~~g~~~~~~~~~~~~~~~-~~~~~~-~~v~IiG~G~~g~e~a~~l~~~g~~Vtli~~~~~~~~~~~~~~~~~~~~~l~~ 267 (477)
.++..+.+...+++.+++. .+...+ ++++|||+|++|+|+|..+++.|.+|+++++.+.+++.+++++.+.+.+.+++
T Consensus 188 ~p~i~G~~~~~v~~~~~~~~~l~~~~g~~vvViGgG~~g~E~A~~l~~~G~~Vtlv~~~~~~l~~~~~~~~~~l~~~l~~ 267 (523)
T 1mo9_A 188 TLDVPGVNAKGVFDHATLVEELDYEPGSTVVVVGGSKTAVEYGCFFNATGRRTVMLVRTEPLKLIKDNETRAYVLDRMKE 267 (523)
T ss_dssp CCCSTTTTSBTEEEHHHHHHHCCSCCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCTTTTCCSHHHHHHHHHHHHH
T ss_pred CCCCCCcccCcEeeHHHHHHHHHhcCCCeEEEECCCHHHHHHHHHHHHcCCeEEEEEecCcccccccHHHHHHHHHHHHh
Confidence 4432222334478888888 777777 99999999999999999999999999999999999999999999999999999
Q ss_pred cCcEEEeCceEEEEEEcCCe----EEEEEeecCCCceE-EEEcCEEEEeecCCCCCCCCCccccceeecCCCCeecCCCC
Q 011787 268 QKMKFMLKTKVVGVDLSGDG----VKLTLEPAAGGEKT-ILEADVVLVSAGRTPFTAGLGLDKIGVETDKMGRIPVNERF 342 (477)
Q Consensus 268 ~gv~~~~~~~v~~i~~~~~~----~~v~~~~~~~~~~~-~i~~D~vi~a~G~~p~~~~l~~~~~gl~~~~~g~i~vd~~l 342 (477)
.||+++++++|++++.++++ +.+++. +++ ++++|.||+|+|++||++. .++.+|++++++|+|.||+++
T Consensus 268 ~GV~i~~~~~V~~i~~~~~~~v~~~~v~~~-----~G~~~i~aD~Vv~A~G~~p~~~~-~l~~~gl~~~~~G~i~Vd~~~ 341 (523)
T 1mo9_A 268 QGMEIISGSNVTRIEEDANGRVQAVVAMTP-----NGEMRIETDFVFLGLGEQPRSAE-LAKILGLDLGPKGEVLVNEYL 341 (523)
T ss_dssp TTCEEESSCEEEEEEECTTSBEEEEEEEET-----TEEEEEECSCEEECCCCEECCHH-HHHHHTCCBCTTSCBCCCTTS
T ss_pred CCcEEEECCEEEEEEEcCCCceEEEEEEEC-----CCcEEEEcCEEEECcCCccCCcc-CHHHcCCccCCCCCEEECCCC
Confidence 99999999999999875444 455553 455 8999999999999999872 267889999888999999999
Q ss_pred CCCCCCeEEecccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCCceEEEcCCCeeeecCCHHHHHHcCCCEEEEEEec
Q 011787 343 ATNIPGVYAIGDVIPGPMLAHKAEEDGVACVEFLAGKHGHVDYDKVPGVVYTHPEVASVGKTEEQVKELGVEYRVGKFPF 422 (477)
Q Consensus 343 ~t~~~~vya~GD~~~~~~~~~~A~~~g~~aa~~i~~~~~~~~~~~~p~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~ 422 (477)
||+.|+|||+|||++.+.+++.|..||++||.||++...++++..+|+++|++|+++++|+|+++|+..|+++.+..+++
T Consensus 342 ~t~~~~IyA~GD~~~~~~~~~~A~~~g~~aa~~i~g~~~~~~~~~~p~~~~~~~~~a~vG~~e~~a~~~g~~~~~~~~~~ 421 (523)
T 1mo9_A 342 QTSVPNVYAVGDLIGGPMEMFKARKSGCYAARNVMGEKISYTPKNYPDFLHTHYEVSFLGMGEEEARAAGHEIVTIKMPP 421 (523)
T ss_dssp BCSSTTEEECGGGGCSSCSHHHHHHHHHHHHHHHTTCCCCCCCCSCCEEEESSSEEEEEECCHHHHHHTTCCEEEEEESC
T ss_pred ccCCCCEEEEeecCCCcccHHHHHHHHHHHHHHHcCCCCCCCCCCCCeEEECCCceEEEeCCHHHHHhCCCCEEEEEEec
Confidence 99999999999999999999999999999999999876666788899999999999999999999999999999999888
Q ss_pred Cc--------------cccchhc--CCCceEEEEEEECCCCeEEEEEEEcCChHHHHHHHHHHhcCC
Q 011787 423 LA--------------NSRAKAI--DDAEGIVKILAEKETDKILGVHIMAPNAGELIHEAAMATHDK 473 (477)
Q Consensus 423 ~~--------------~~~~~~~--~~~~~~~k~~~~~~~~~i~G~~~~g~~~~~~~~~~~~~~~~~ 473 (477)
.. ..++.+. +++.+|+|+++|+++++|||+|++|+++.|+|+.+++||.++
T Consensus 422 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~ilG~~~~g~~a~e~i~~~~~ai~~~ 488 (523)
T 1mo9_A 422 DTENGLNVALPASDRTMLYAFGKGTAHMSGFQKIVIDAKTRKVLGAHHVGYGAKDAFQYLNVLIKQG 488 (523)
T ss_dssp CSTTTTCSSCSCCTTTHHHHHSTTTGGGGCEEEEEEETTTCBEEEEEEEESSCHHHHHHHHHHHHTT
T ss_pred ccccccccccccccccccceEEeecCCCCEEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHCC
Confidence 76 5677776 667899999999999999999999999999999999999754
No 31
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=100.00 E-value=5.3e-58 Score=476.12 Aligned_cols=427 Identities=29% Similarity=0.441 Sum_probs=351.6
Q ss_pred CCCCcEEEECCChHHHHHHHHHHHCCCeEEEEecC-C-------CCCceeeccCccCchhhhhhhHHHHHHHhhhhhCCc
Q 011787 41 SDENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKR-G-------ALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGV 112 (477)
Q Consensus 41 ~~~~dvvIIGgG~AGl~aA~~l~~~g~~V~lie~~-~-------~~GG~~~~~~~~p~~~l~~~~~~~~~~~~~~~~~g~ 112 (477)
..++||+||||||||++||.+|++.|++|+|||+. + .+||+|.+.+|+|++.+.......... ..+..+|+
T Consensus 105 ~~~~dvvVIG~GpAGl~aA~~l~~~g~~v~liE~~~~~~~g~~~~~GG~~~~~g~iP~~~l~~~~~~~~~~-~~~~~~g~ 183 (598)
T 2x8g_A 105 KYDYDLIVIGGGSGGLAAGKEAAKYGAKTAVLDYVEPTPIGTTWGLGGTCVNVGCIPKKLMHQAGLLSHAL-EDAEHFGW 183 (598)
T ss_dssp SSSEEEEEECCSHHHHHHHHHHHHTTCCEEEECCCCCCTTCCCCCTTHHHHHHSHHHHHHHHHHHHHHHHH-HHHHHTTC
T ss_pred cccccEEEECCCccHHHHHHHHHhCCCeEEEEeccCCcccccccccCceEeccCCCchHHHHHHHHHHHHH-hhHHhCCc
Confidence 45699999999999999999999999999999973 2 489999999999999887665544433 33456676
Q ss_pred cccc--cccChHHHHHHHHHHHHHHHHHHHHHhhhCCeEEEEeEEEEecCCEEEEEecCCceEEEEecEEEEccCCCCCC
Q 011787 113 KFSS--VEVDLPAMMAQKDKAVSNLTRGIEGLFKKNKVTYVKGYGKFISPSEVSVDTIEGGNTVVKGKNIIIATGSDVKS 190 (477)
Q Consensus 113 ~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~v~~~~g~~~~i~~d~lvlAtG~~~~~ 190 (477)
.... ...+|..+..+....+..+...+...+...+++++.+.+.+++...+.+...+|+..++.||+||||||++|+.
T Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~~~~~~~~~~v~v~~~~g~~~~~~~d~lviAtGs~p~~ 263 (598)
T 2x8g_A 184 SLDRSKISHNWSTMVEGVQSHIGSLNWGYKVALRDNQVTYLNAKGRLISPHEVQITDKNQKVSTITGNKIILATGERPKY 263 (598)
T ss_dssp CCCGGGCCCCHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEECSEEEEEETTEEEEECTTCCEEEEEEEEEEECCCEEECC
T ss_pred cccCCcCccCHHHHHHHHHHHHHHHHHHHHHHHhhCCcEEEEEEEEEcCCCEEEEEeCCCCeEEEEeCEEEEeCCCCCCC
Confidence 5432 46789999888888877776666666778899999999999999998888777755679999999999998864
Q ss_pred C--CCCccCCceEecchhhhcccCCCCeeEEEcccHHHHHHHHHHHHcCCcEEEEEeCCCcCCCCCHHHHHHHHHHHHhc
Q 011787 191 L--PGITIDEKRIVSSTGALALNEVPKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIVPSMDGEIRKQFQRSLEKQ 268 (477)
Q Consensus 191 ~--~g~~~~~~~~~~~~~~~~~~~~~~~v~IiG~G~~g~e~a~~l~~~g~~Vtli~~~~~~~~~~~~~~~~~~~~~l~~~ 268 (477)
+ ||.. ....+.+++..+...+++++|||+|++|+|+|..|++.|.+||++++. .+++.+++++.+.+.+.+++.
T Consensus 264 p~i~G~~---~~~~~~~~~~~~~~~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~-~~l~~~d~~~~~~~~~~l~~~ 339 (598)
T 2x8g_A 264 PEIPGAV---EYGITSDDLFSLPYFPGKTLVIGASYVALECAGFLASLGGDVTVMVRS-ILLRGFDQQMAEKVGDYMENH 339 (598)
T ss_dssp CSSTTHH---HHCEEHHHHTTCSSCCCSEEEECCSHHHHHHHHHHHHTTCCEEEEESS-CSSTTSCHHHHHHHHHHHHHT
T ss_pred CCCCCcc---cceEcHHHHhhCccCCCEEEEECCCHHHHHHHHHHHHcCCEEEEEECC-cCcCcCCHHHHHHHHHHHHhC
Confidence 3 3322 234567777777777899999999999999999999999999999988 678889999999999999999
Q ss_pred CcEEEeCceEEEEEEc------C---CeEEEEEeecCCCceEEEEcCEEEEeecCCCCCCCCCccccceeecCCCCeecC
Q 011787 269 KMKFMLKTKVVGVDLS------G---DGVKLTLEPAAGGEKTILEADVVLVSAGRTPFTAGLGLDKIGVETDKMGRIPVN 339 (477)
Q Consensus 269 gv~~~~~~~v~~i~~~------~---~~~~v~~~~~~~~~~~~i~~D~vi~a~G~~p~~~~l~~~~~gl~~~~~g~i~vd 339 (477)
||++++++.++++... + +++.+.+.. .++....+++|.|++|+|++||++.+.++..|++++++|+|.||
T Consensus 340 gv~i~~~~~v~~v~~~~~~~~~~~~~~~~~v~~~~-~~g~~~~~~~D~vi~a~G~~p~~~~l~~~~~gl~~~~~G~i~vd 418 (598)
T 2x8g_A 340 GVKFAKLCVPDEIKQLKVVDTENNKPGLLLVKGHY-TDGKKFEEEFETVIFAVGREPQLSKVLCETVGVKLDKNGRVVCT 418 (598)
T ss_dssp TCEEEETEEEEEEEEEECCBTTTTBCCEEEEEEEE-TTSCEEEEEESEEEECSCEEECGGGTBCGGGCCCBCTTSCBCCC
T ss_pred CCEEEECCeEEEEEeccccccccCCCceEEEEEEe-CCCcEEeccCCEEEEEeCCccccCccCchhcCceECCCCcEEeC
Confidence 9999999988888542 2 444444321 12223345699999999999999876567889999988999999
Q ss_pred CCCCCCCCCeEEecccC-CCCCchhHHHHHHHHHHHHHcCCC-CCCCCCCCceEEEcCCCeeeecCCHHHHHHc-C-CCE
Q 011787 340 ERFATNIPGVYAIGDVI-PGPMLAHKAEEDGVACVEFLAGKH-GHVDYDKVPGVVYTHPEVASVGKTEEQVKEL-G-VEY 415 (477)
Q Consensus 340 ~~l~t~~~~vya~GD~~-~~~~~~~~A~~~g~~aa~~i~~~~-~~~~~~~~p~~~~~~~~~~~~G~~~~~~~~~-~-~~~ 415 (477)
+++||++|+|||+|||+ +.+.+++.|..||+.||.||++.. ...++..+|+++|++|+++++|+++++|... + ..+
T Consensus 419 ~~~~ts~~~VyA~GD~~~~~~~~~~~A~~~g~~aa~~i~~~~~~~~~~~~~p~~~~~~~~~a~vGl~e~~a~~~~~~~~~ 498 (598)
T 2x8g_A 419 DDEQTTVSNVYAIGDINAGKPQLTPVAIQAGRYLARRLFAGATELTDYSNVATTVFTPLEYGACGLSEEDAIEKYGDKDI 498 (598)
T ss_dssp TTSBCSSTTEEECGGGBTTSCCCHHHHHHHHHHHHHHHHHCCCCCCCCTTCCEEECSSSCEEEEECCHHHHHHHHCGGGE
T ss_pred CCCcCCCCCEEEEeeecCCCCccHHHHHHhHHHHHHHHhcCCCcccCCCCCcEEEECCCceEEEeCCHHHHHhhCCCCcE
Confidence 99999999999999995 557899999999999999999654 3467888999999999999999999999876 3 357
Q ss_pred EEEEEecCccccchhcC-CCceEEEEEEEC-CCCeEEEEEEEcCChHHHHHHHHHHhcCC
Q 011787 416 RVGKFPFLANSRAKAID-DAEGIVKILAEK-ETDKILGVHIMAPNAGELIHEAAMATHDK 473 (477)
Q Consensus 416 ~~~~~~~~~~~~~~~~~-~~~~~~k~~~~~-~~~~i~G~~~~g~~~~~~~~~~~~~~~~~ 473 (477)
.+...++....+..... .+.+++|+++++ ++++|+|+|++|+++.|+|+.+++||.++
T Consensus 499 ~~~~~~~~~~~~~~~~~~~~~~~~kli~~~~~~~~ilG~~~~g~~a~~~i~~~~~ai~~~ 558 (598)
T 2x8g_A 499 EVYHSNFKPLEWTVAHREDNVCYMKLVCRKSDNMRVLGLHVLGPNAGEITQGYAVAIKMG 558 (598)
T ss_dssp EEEEEEECCTHHHHTTCCSSCEEEEEEEETTTTTEEEEEEEESTTHHHHHHHHHHHHHTT
T ss_pred EEEEEeccchhHHhhcCCCCcEEEEEEEecCCCCEEEEEEEECCCHHHHHHHHHHHHHcC
Confidence 88777777666555443 367999999995 68999999999999999999999999754
No 32
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=100.00 E-value=3.8e-56 Score=443.64 Aligned_cols=379 Identities=20% Similarity=0.293 Sum_probs=289.6
Q ss_pred cEEEECCChHHHHHHHHHHHCC--CeEEEEecCCCCCceeeccCccCchhhhhhhHHHHHHHhhhhhCCccccccccChH
Q 011787 45 DVVVIGGGPGGYVAAIKAAQLG--LKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSVEVDLP 122 (477)
Q Consensus 45 dvvIIGgG~AGl~aA~~l~~~g--~~V~lie~~~~~GG~~~~~~~~p~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 122 (477)
+||||||||||++||.+|++.| .+|+|||+++..++. ..|+|.. +... .......+..
T Consensus 2 KVvIIG~G~AGl~aA~~l~~~g~~~~V~lie~~~~~~~~---~~~l~~~---------------~~~~-~~~~~~~~~~- 61 (437)
T 4eqs_A 2 KIVVVGAVAGGATCASQIRRLDKESDIIIFEKDRDMSFA---NCALPYV---------------IGEV-VEDRRYALAY- 61 (437)
T ss_dssp CEEEECCSTTHHHHHHHHHHHCSSSCEEEEESSSCSSBC---GGGHHHH---------------HTTS-SCCGGGTBCC-
T ss_pred eEEEECCCHHHHHHHHHHHhCCCCCcEEEEeCCCCCCCC---cchhHHH---------------HcCC-ccchhhhhhc-
Confidence 6999999999999999999987 579999997654321 1122210 0000 0000000000
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhCCeEEEEe-EEEEecCCEEEEEe---cCCceEEEEecEEEEccCCCCCCCCCCccCC
Q 011787 123 AMMAQKDKAVSNLTRGIEGLFKKNKVTYVKG-YGKFISPSEVSVDT---IEGGNTVVKGKNIIIATGSDVKSLPGITIDE 198 (477)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-~~~~~~~~~~~v~~---~~g~~~~i~~d~lvlAtG~~~~~~~g~~~~~ 198 (477)
..+.++++.+++++.+ .+..+|.....+.. ..+...++.||+||||||++|+.++ ++.+.
T Consensus 62 ---------------~~~~~~~~~~i~~~~~~~V~~id~~~~~~~~~~~~~~~~~~~~yd~lVIATGs~p~~p~-i~g~~ 125 (437)
T 4eqs_A 62 ---------------TPEKFYDRKQITVKTYHEVIAINDERQTVSVLNRKTNEQFEESYDKLILSPGASANSLG-FESDI 125 (437)
T ss_dssp ---------------CHHHHHHHHCCEEEETEEEEEEETTTTEEEEEETTTTEEEEEECSEEEECCCEEECCCC-CCCTT
T ss_pred ---------------CHHHHHHhcCCEEEeCCeEEEEEccCcEEEEEeccCCceEEEEcCEEEECCCCcccccc-ccCce
Confidence 0123445668888776 46677765443332 2334467999999999999986443 32221
Q ss_pred c-eEecchhhhccc-----CCCCeeEEEcccHHHHHHHHHHHHcCCcEEEEEeCCCcCCCCCHHHHHHHHHHHHhcCcEE
Q 011787 199 K-RIVSSTGALALN-----EVPKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIVPSMDGEIRKQFQRSLEKQKMKF 272 (477)
Q Consensus 199 ~-~~~~~~~~~~~~-----~~~~~v~IiG~G~~g~e~a~~l~~~g~~Vtli~~~~~~~~~~~~~~~~~~~~~l~~~gv~~ 272 (477)
. .+.+..++..++ ..+++++|||+|++|+|+|..++++|.+||++++.+++++.+|+++.+.+.+.++++||++
T Consensus 126 ~~~~~~~~~~~~l~~~~~~~~~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~ll~~~d~~~~~~~~~~l~~~gV~i 205 (437)
T 4eqs_A 126 TFTLRNLEDTDAIDQFIKANQVDKVLVVGAGYVSLEVLENLYERGLHPTLIHRSDKINKLMDADMNQPILDELDKREIPY 205 (437)
T ss_dssp EECCSSHHHHHHHHHHHHHHTCCEEEEECCSHHHHHHHHHHHHHTCEEEEEESSSCCSTTSCGGGGHHHHHHHHHTTCCE
T ss_pred EEeeccHHHHHHHHHhhhccCCcEEEEECCccchhhhHHHHHhcCCcceeeeeeccccccccchhHHHHHHHhhccceEE
Confidence 1 222334433332 3488999999999999999999999999999999999999999999999999999999999
Q ss_pred EeCceEEEEEEcCCeEEEEEeecCCCceEEEEcCEEEEeecCCCCCCCCCccccceeecCCCCeecCCCCCCCCCCeEEe
Q 011787 273 MLKTKVVGVDLSGDGVKLTLEPAAGGEKTILEADVVLVSAGRTPFTAGLGLDKIGVETDKMGRIPVNERFATNIPGVYAI 352 (477)
Q Consensus 273 ~~~~~v~~i~~~~~~~~v~~~~~~~~~~~~i~~D~vi~a~G~~p~~~~l~~~~~gl~~~~~g~i~vd~~l~t~~~~vya~ 352 (477)
+++++|++++. +. +.+. +++++++|.|++|+|++||++. ++..|++++++|+|.||+++||++|||||+
T Consensus 206 ~~~~~v~~~~~--~~--v~~~-----~g~~~~~D~vl~a~G~~Pn~~~--~~~~gl~~~~~G~I~vd~~~~Ts~p~IyA~ 274 (437)
T 4eqs_A 206 RLNEEINAING--NE--ITFK-----SGKVEHYDMIIEGVGTHPNSKF--IESSNIKLDRKGFIPVNDKFETNVPNIYAI 274 (437)
T ss_dssp EESCCEEEEET--TE--EEET-----TSCEEECSEEEECCCEEESCGG--GTTSSCCCCTTSCEECCTTCBCSSTTEEEC
T ss_pred EeccEEEEecC--Ce--eeec-----CCeEEeeeeEEEEeceecCcHH--HHhhhhhhccCCcEecCCCccCCCCCEEEE
Confidence 99999998853 33 3443 6678999999999999999986 788899999999999999999999999999
Q ss_pred cccCCC----------CCchhHHHHHHHHHHHHHcCCCCC--CCCCCCceEEEcCCCeeeecCCHHHHHHcCCCEEEEEE
Q 011787 353 GDVIPG----------PMLAHKAEEDGVACVEFLAGKHGH--VDYDKVPGVVYTHPEVASVGKTEEQVKELGVEYRVGKF 420 (477)
Q Consensus 353 GD~~~~----------~~~~~~A~~~g~~aa~~i~~~~~~--~~~~~~p~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~ 420 (477)
|||++. +.+++.|.+||+++|+||++.+.. .++...|.+.|++|+++++|+||+||+..+ +++..+
T Consensus 275 GDva~~~~~~~~~~~~~~~a~~A~~~g~~~a~ni~g~~~~~~~~~~~~~~~~~~~p~ia~vGlte~~a~~~~--~~~~~~ 352 (437)
T 4eqs_A 275 GDIATSHYRHVDLPASVPLAWGAHRAASIVAEQIAGNDTIEFKGFLGNNIVKFFDYTFASVGVKPNELKQFD--YKMVEV 352 (437)
T ss_dssp GGGEEEEBSSSSSEECCCSHHHHHHHHHHHHHHHHSCTTCCCCCBCCCEEEEETTEEEEEEESCGGGGGGSC--EEEEEE
T ss_pred EEccCcccccCCccccchhHHHHHHHHHHHHHHHcCCCCcccccceeEEeeeeccceEEEeeCCHHHHHhCC--ceEEEE
Confidence 999853 347899999999999999987642 245667889999999999999999998765 555555
Q ss_pred ecCccccchhcCCCceEEEEEEECCCCeEEEEEEEcCC-hHHHHHHHHHHhcCC
Q 011787 421 PFLANSRAKAIDDAEGIVKILAEKETDKILGVHIMAPN-AGELIHEAAMATHDK 473 (477)
Q Consensus 421 ~~~~~~~~~~~~~~~~~~k~~~~~~~~~i~G~~~~g~~-~~~~~~~~~~~~~~~ 473 (477)
++....+. ..++++||+|+++|++|++|||+|++|++ |.|+|+.+++||.++
T Consensus 353 ~~~~~~~~-~~~~~~g~~Kli~d~~~~~ilGa~~~g~~~a~e~i~~~~~ai~~~ 405 (437)
T 4eqs_A 353 TQGAHANY-YPGNSPLHLRVYYDTSNRQILRAAAVGKEGADKRIDVLSMAMMNQ 405 (437)
T ss_dssp EEESSCTT-SSSCCEEEEEEEEETTTCBEEEEEEEESSSHHHHHHHHHHHHHTT
T ss_pred ecCCchhh-cCCCCcEEEEEEEECCCCEEEEEEEECcCCHHHHHHHHHHHHHcC
Confidence 54443332 23567899999999999999999999985 999999999999854
No 33
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=100.00 E-value=7.9e-55 Score=437.18 Aligned_cols=380 Identities=23% Similarity=0.325 Sum_probs=299.5
Q ss_pred CCcEEEECCChHHHHHHHHHHHC--CCeEEEEecCCCCCceeeccCccCchhhhhhhHHHHHHHhhhhhCCccccccccC
Q 011787 43 ENDVVVIGGGPGGYVAAIKAAQL--GLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSVEVD 120 (477)
Q Consensus 43 ~~dvvIIGgG~AGl~aA~~l~~~--g~~V~lie~~~~~GG~~~~~~~~p~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~~ 120 (477)
++||+|||||+||++||..|++. +.+|+|||+++.+++.. ..+|.. +. +. .+
T Consensus 3 ~~~VvIIGgG~aGl~aA~~L~~~~~~~~V~vie~~~~~~~~~---~~~p~~---------------~~--~~------~~ 56 (449)
T 3kd9_A 3 LKKVVIIGGGAAGMSAASRVKRLKPEWDVKVFEATEWVSHAP---CGIPYV---------------VE--GL------ST 56 (449)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSSCCC-----------------------------------------
T ss_pred cCcEEEECCcHHHHHHHHHHHHhCcCCCEEEEECCCccccCC---cCCccc---------------cC--CC------CC
Confidence 57999999999999999999998 78999999977654321 001110 00 00 00
Q ss_pred hHHHHHHHHHHHHHHHHHHHH-HhhhCCeEEEEe-EEEEecCCEEEEEecCCceEEEEecEEEEccCCCCCC--CCCCcc
Q 011787 121 LPAMMAQKDKAVSNLTRGIEG-LFKKNKVTYVKG-YGKFISPSEVSVDTIEGGNTVVKGKNIIIATGSDVKS--LPGITI 196 (477)
Q Consensus 121 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~v~~~~~-~~~~~~~~~~~v~~~~g~~~~i~~d~lvlAtG~~~~~--~~g~~~ 196 (477)
. ..+.....+ +.++.+++++.+ .+..++...+.+.+.++ ..++.||+||||||++|.. +|+.+
T Consensus 57 ~-----------~~~~~~~~~~~~~~~gi~v~~~~~v~~i~~~~~~v~~~~g-~~~~~~d~lviAtG~~p~~p~i~G~~- 123 (449)
T 3kd9_A 57 P-----------DKLMYYPPEVFIKKRGIDLHLNAEVIEVDTGYVRVRENGG-EKSYEWDYLVFANGASPQVPAIEGVN- 123 (449)
T ss_dssp --------------------CTHHHHTTCEEETTCEEEEECSSEEEEECSSS-EEEEECSEEEECCCEEECCCSCBTTT-
T ss_pred H-----------HHhhhcCHHHHHHhcCcEEEecCEEEEEecCCCEEEECCc-eEEEEcCEEEECCCCCCCCCCCCCCC-
Confidence 0 001111112 225678999988 78889988888877655 3579999999999998854 34443
Q ss_pred CCceEec---chhhhccc---C--CCCeeEEEcccHHHHHHHHHHHHcCCcEEEEEeCCCcCCC-CCHHHHHHHHHHHHh
Q 011787 197 DEKRIVS---STGALALN---E--VPKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIVPS-MDGEIRKQFQRSLEK 267 (477)
Q Consensus 197 ~~~~~~~---~~~~~~~~---~--~~~~v~IiG~G~~g~e~a~~l~~~g~~Vtli~~~~~~~~~-~~~~~~~~~~~~l~~ 267 (477)
...+++ ..+...+. . .+++++|||+|++|+|+|..+++.|.+|+++++.+++++. +++++.+.+.+.+++
T Consensus 124 -~~~v~~~~~~~~~~~~~~~~~~~~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~~l~~~l~~ 202 (449)
T 3kd9_A 124 -LKGVFTADLPPDALAIREYMEKYKVENVVIIGGGYIGIEMAEAFAAQGKNVTMIVRGERVLRRSFDKEVTDILEEKLKK 202 (449)
T ss_dssp -STTEECSCSTHHHHHHHHHHSSSCCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSTTTTTSCHHHHHHHHHHHTT
T ss_pred -CCCEEEeCCHHHHHHHHHHHHhcCCCeEEEECCCHHHHHHHHHHHhCCCeEEEEEcCCccchhhcCHHHHHHHHHHHHh
Confidence 233443 33333322 2 5789999999999999999999999999999999999987 999999999999999
Q ss_pred cCcEEEeCceEEEEEEcCCeEEEEEeecCCCceEEEEcCEEEEeecCCCCCCCCCccccceeecCCCCeecCCCCCCCCC
Q 011787 268 QKMKFMLKTKVVGVDLSGDGVKLTLEPAAGGEKTILEADVVLVSAGRTPFTAGLGLDKIGVETDKMGRIPVNERFATNIP 347 (477)
Q Consensus 268 ~gv~~~~~~~v~~i~~~~~~~~v~~~~~~~~~~~~i~~D~vi~a~G~~p~~~~l~~~~~gl~~~~~g~i~vd~~l~t~~~ 347 (477)
. |++++++.+.+++.++ ++..... ++.++++|.|++|+|++|++++ ++.+|++++++|+|.||+++||+.|
T Consensus 203 ~-v~i~~~~~v~~i~~~~-~v~~v~~-----~g~~i~~D~Vv~a~G~~p~~~l--~~~~gl~~~~~G~i~vd~~~~t~~~ 273 (449)
T 3kd9_A 203 H-VNLRLQEITMKIEGEE-RVEKVVT-----DAGEYKAELVILATGIKPNIEL--AKQLGVRIGETGAIWTNEKMQTSVE 273 (449)
T ss_dssp T-SEEEESCCEEEEECSS-SCCEEEE-----TTEEEECSEEEECSCEEECCHH--HHHTTCCBCTTSSBCCCTTCBCSST
T ss_pred C-cEEEeCCeEEEEeccC-cEEEEEe-----CCCEEECCEEEEeeCCccCHHH--HHhCCccCCCCCCEEECCCCccCCC
Confidence 9 9999999999997655 3332232 4578999999999999999875 6788999999999999999999999
Q ss_pred CeEEecccCC-------C---CCchhHHHHHHHHHHHHHcCCCCCCC-CCCCceEEEcCCCeeeecCCHHHHHHcCCCEE
Q 011787 348 GVYAIGDVIP-------G---PMLAHKAEEDGVACVEFLAGKHGHVD-YDKVPGVVYTHPEVASVGKTEEQVKELGVEYR 416 (477)
Q Consensus 348 ~vya~GD~~~-------~---~~~~~~A~~~g~~aa~~i~~~~~~~~-~~~~p~~~~~~~~~~~~G~~~~~~~~~~~~~~ 416 (477)
+|||+|||+. . +.+++.|..||+++|+||++....++ +...|++.|++|+++++|+||+||++.|+++.
T Consensus 274 ~IyA~GD~~~~~~~~~g~~~~~~l~~~A~~~g~~aa~~i~g~~~~~~~~~~~~~~~~~~~~~~~vG~~e~~a~~~g~~~~ 353 (449)
T 3kd9_A 274 NVYAAGDVAETRHVITGRRVWVPLAPAGNKMGYVAGSNIAGKELHFPGVLGTAVTKFMDVEIGKTGLTEMEALKEGYDVR 353 (449)
T ss_dssp TEEECSTTBCEEBTTTCSEECCCCHHHHHHHHHHHHHHHTTCCCCCCCBCCCEEEEETTEEEEEEECCHHHHHHTTCCEE
T ss_pred CEEEeeeeeeeccccCCceEEeccHHHHHHHHHHHHHHhcCCCccCCCcccceEEEEcCcEEEEecCCHHHHHHCCCceE
Confidence 9999999983 2 47899999999999999998765443 34568899999999999999999999999999
Q ss_pred EEEEecCccccchhc-CCCceEEEEEEECCCCeEEEEEEEcCChHHHHHHHHHHhcCC
Q 011787 417 VGKFPFLANSRAKAI-DDAEGIVKILAEKETDKILGVHIMAPNAGELIHEAAMATHDK 473 (477)
Q Consensus 417 ~~~~~~~~~~~~~~~-~~~~~~~k~~~~~~~~~i~G~~~~g~~~~~~~~~~~~~~~~~ 473 (477)
+..++ ...++... +++++|+|+++|++|++|||+|++|+++.|+|+.+++||.++
T Consensus 354 ~~~~~--~~~~~~~~~~~~~~~~kli~~~~~~~ilG~~~~g~~a~e~i~~~~~ai~~~ 409 (449)
T 3kd9_A 354 TAFIK--ASTRPHYYPGGREIWLKGVVDNETNRLLGVQVVGSDILPRIDTAAAMLMAG 409 (449)
T ss_dssp EEEEE--EESSCTTSTTCCEEEEEEEEETTTCBEEEEEEEESSCHHHHHHHHHHHHTT
T ss_pred EEEEe--cCCccccCCCCceEEEEEEEECCCCEEEEEEEEChHHHHHHHHHHHHHHcC
Confidence 88764 34455555 567899999999999999999999999999999999999754
No 34
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=100.00 E-value=3.4e-54 Score=432.70 Aligned_cols=380 Identities=22% Similarity=0.260 Sum_probs=294.9
Q ss_pred CcEEEECCChHHHHHHHHHHHC--CCeEEEEecCCCCCceeeccCccCchhhhhhhHHHHHHHhhhhhCCccccccccCh
Q 011787 44 NDVVVIGGGPGGYVAAIKAAQL--GLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSVEVDL 121 (477)
Q Consensus 44 ~dvvIIGgG~AGl~aA~~l~~~--g~~V~lie~~~~~GG~~~~~~~~p~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 121 (477)
+||+|||||+||++||.+|++. |.+|+|||+++.+|. .|............ .......
T Consensus 3 ~~VvIIGgG~AGl~aA~~L~~~~~g~~V~vie~~~~~g~-------~~~~~~~~~~~~~~-----------~~~~~~~-- 62 (452)
T 3oc4_A 3 LKIVIIGASFAGISAAIASRKKYPQAEISLIDKQATVGY-------LSGGLSAYFNHTIN-----------ELHEARY-- 62 (452)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCSSSEEEEECSSSCCSS-------CCC---------------------------CC--
T ss_pred CCEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCCCcc-------cCccchhhhcCCCC-----------CHHHhhc--
Confidence 6999999999999999999998 899999999876652 11110000000000 0000000
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhCCeEEEEe-EEEEecCC--EEEEEecCCceEEEEecEEEEccCCCCCCCCCCccCC
Q 011787 122 PAMMAQKDKAVSNLTRGIEGLFKKNKVTYVKG-YGKFISPS--EVSVDTIEGGNTVVKGKNIIIATGSDVKSLPGITIDE 198 (477)
Q Consensus 122 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-~~~~~~~~--~~~v~~~~g~~~~i~~d~lvlAtG~~~~~~~g~~~~~ 198 (477)
.....+.+.+++++.+ .+..++.. .+.+.. .+....+.||+||||||++|..++..+.+.
T Consensus 63 ----------------~~~~~~~~~gi~~~~~~~V~~id~~~~~v~v~~-~~~~~~~~~d~lviAtG~~p~~p~i~g~~~ 125 (452)
T 3oc4_A 63 ----------------ITEEELRRQKIQLLLNREVVAMDVENQLIAWTR-KEEQQWYSYDKLILATGASQFSTQIRGSQT 125 (452)
T ss_dssp ----------------CCHHHHHHTTEEEECSCEEEEEETTTTEEEEEE-TTEEEEEECSEEEECCCCCBCCCCCBTTTC
T ss_pred ----------------CCHHHHHHCCCEEEECCEEEEEECCCCEEEEEe-cCceEEEEcCEEEECCCcccCCCCCCCCCC
Confidence 0123445678888654 56666554 444431 223478999999999999986544333334
Q ss_pred ceEecchhhh------cccCCCCeeEEEcccHHHHHHHHHHHHcCCcEEEEEeCCCcCCC-CCHHHHHHHHHHHHhcCcE
Q 011787 199 KRIVSSTGAL------ALNEVPKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIVPS-MDGEIRKQFQRSLEKQKMK 271 (477)
Q Consensus 199 ~~~~~~~~~~------~~~~~~~~v~IiG~G~~g~e~a~~l~~~g~~Vtli~~~~~~~~~-~~~~~~~~~~~~l~~~gv~ 271 (477)
..+++..+.. .....+++++|||+|++|+|+|..+++.|.+|+++++.+++++. +|+++.+.+.+.+++.||+
T Consensus 126 ~~v~~~~~~~~~~~~~~~~~~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~~~d~~~~~~l~~~l~~~GV~ 205 (452)
T 3oc4_A 126 EKLLKYKFLSGALAAVPLLENSQTVAVIGAGPIGMEAIDFLVKMKKTVHVFESLENLLPKYFDKEMVAEVQKSLEKQAVI 205 (452)
T ss_dssp TTEEEGGGCC----CCHHHHTCSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSSTTTCCHHHHHHHHHHHHTTTEE
T ss_pred CCEEEeCCHHHHHHHHHHHhcCCEEEEECCCHHHHHHHHHHHhCCCeEEEEEccCccccccCCHHHHHHHHHHHHHcCCE
Confidence 4555554332 23345899999999999999999999999999999999999885 8999999999999999999
Q ss_pred EEeCceEEEEEEcCCeEEEEEeecCCCceEEEEcCEEEEeecCCCCCCCCCccccceeecCCCCeecCCCCCCCCCCeEE
Q 011787 272 FMLKTKVVGVDLSGDGVKLTLEPAAGGEKTILEADVVLVSAGRTPFTAGLGLDKIGVETDKMGRIPVNERFATNIPGVYA 351 (477)
Q Consensus 272 ~~~~~~v~~i~~~~~~~~v~~~~~~~~~~~~i~~D~vi~a~G~~p~~~~l~~~~~gl~~~~~g~i~vd~~l~t~~~~vya 351 (477)
++++++|++++..++++.+.+. ++ ++++|.|++|+|++||++. ++.. +.++++|+|.||+++||+.|+|||
T Consensus 206 i~~~~~v~~i~~~~~~v~v~~~-----~g-~i~aD~Vv~A~G~~p~~~~--l~~~-~~~~~~g~i~vd~~~~t~~~~IyA 276 (452)
T 3oc4_A 206 FHFEETVLGIEETANGIVLETS-----EQ-EISCDSGIFALNLHPQLAY--LDKK-IQRNLDQTIAVDAYLQTSVPNVFA 276 (452)
T ss_dssp EEETCCEEEEEECSSCEEEEES-----SC-EEEESEEEECSCCBCCCSS--CCTT-SCBCTTSCBCCCTTCBCSSTTEEE
T ss_pred EEeCCEEEEEEccCCeEEEEEC-----CC-EEEeCEEEECcCCCCChHH--HHhh-hccCCCCCEEECcCccCCCCCEEE
Confidence 9999999999876777655543 33 8999999999999999986 3443 788889999999999999999999
Q ss_pred ecccCCCC----------CchhHHHHHHHHHHHHHcCCCCCC--CCCCCceEEEcCCCeeeecCCHHHHHHcCCCEEEEE
Q 011787 352 IGDVIPGP----------MLAHKAEEDGVACVEFLAGKHGHV--DYDKVPGVVYTHPEVASVGKTEEQVKELGVEYRVGK 419 (477)
Q Consensus 352 ~GD~~~~~----------~~~~~A~~~g~~aa~~i~~~~~~~--~~~~~p~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~ 419 (477)
+|||++.+ .+++.|..||++||+||++....+ .+..+|+.+|+ |+++++|+||+||++.|+++.+..
T Consensus 277 ~GD~~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~g~~~~~~~~~~~~~~~~~~-~~~a~vG~te~~a~~~g~~~~~~~ 355 (452)
T 3oc4_A 277 IGDCISVMNEPVAETFYAPLVNNAVRTGLVVANNLEEKTHRFIGSLRTMGTKVGD-YYLASTGLTETEGLFFPQTLASII 355 (452)
T ss_dssp CGGGBCEEEGGGTEEECCCCHHHHHHHHHHHTTSSSSCCCCCCCCCCCEEEEETT-EEEEEEECCSGGGGGSSSCEEEEE
T ss_pred EEeeEEeccccCCceeecchHHHHHHHHHHHHHHhcCCCccCCCccccEEEEEcC-eeEEEecCCHHHHHHCCCceEEEE
Confidence 99999753 589999999999999999876443 45667777775 699999999999999999999988
Q ss_pred EecCccccchhcCCCceEEEEEEECCCCeEEEEEEEcC-ChHHHHHHHHHHhcCC
Q 011787 420 FPFLANSRAKAIDDAEGIVKILAEKETDKILGVHIMAP-NAGELIHEAAMATHDK 473 (477)
Q Consensus 420 ~~~~~~~~~~~~~~~~~~~k~~~~~~~~~i~G~~~~g~-~~~~~~~~~~~~~~~~ 473 (477)
+++... + ..+++.+|+|+++|++|++|||+|++|+ +|.|+|+.+++||.++
T Consensus 356 ~~~~~~--~-~~~~~~~~~kli~~~~~~~ilG~~~~g~~~a~e~i~~~~~ai~~~ 407 (452)
T 3oc4_A 356 VRQPAP--P-LQHGTEILGKLIYDKVTQRVLGAQLCSKNNCLEKINTLALSIQTG 407 (452)
T ss_dssp EEEECT--T-TTCSCEEEEEEEEETTTCBEEEEEEEESSCCTHHHHHHHHHHHTT
T ss_pred EecCCc--c-CCCCCeEEEEEEEECCCCEEEEEEEEeCCCHHHHHHHHHHHHHcC
Confidence 776543 3 3356789999999999999999999999 7999999999999854
No 35
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=100.00 E-value=8.3e-54 Score=432.51 Aligned_cols=390 Identities=24% Similarity=0.294 Sum_probs=283.3
Q ss_pred CCcEEEECCChHHHHHHHHHHHC--CCeEEEEecCCCCCceeeccCc-cCchhhhhhhHHHHHHHhhhhhCCcccccccc
Q 011787 43 ENDVVVIGGGPGGYVAAIKAAQL--GLKTTCIEKRGALGGTCLNVGC-IPSKALLHSSHMYHEAMHSFASHGVKFSSVEV 119 (477)
Q Consensus 43 ~~dvvIIGgG~AGl~aA~~l~~~--g~~V~lie~~~~~GG~~~~~~~-~p~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~ 119 (477)
++||+|||||+||++||..|++. |.+|+|||+++.++.. .| +|.. ....+ .
T Consensus 3 ~~~VvIIGaG~aGl~aA~~L~~~~~g~~Vtvie~~~~~~~~----~~gl~~~-----------~~g~~-----------~ 56 (472)
T 3iwa_A 3 LKHVVVIGAVALGPKAACRFKRLDPEAHVTMIDQASRISYG----GCGIPYY-----------VSGEV-----------S 56 (472)
T ss_dssp -CEEEEECCSSHHHHHHHHHHHHCTTSEEEEECCC---------------------------------------------
T ss_pred CCcEEEECCCHHHHHHHHHHHhhCcCCCEEEEECCCccccc----ccccchh-----------hcCCC-----------C
Confidence 47999999999999999999998 8999999997665311 01 1100 00000 0
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHHhhhCCeEEEE-eEEEEecCCEEEEEec---CCceEEEEecEEEEccCCCCCC--CCC
Q 011787 120 DLPAMMAQKDKAVSNLTRGIEGLFKKNKVTYVK-GYGKFISPSEVSVDTI---EGGNTVVKGKNIIIATGSDVKS--LPG 193 (477)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~-~~~~~~~~~~~~v~~~---~g~~~~i~~d~lvlAtG~~~~~--~~g 193 (477)
....+.+... .+......+.++.++++.. ..+..++.....+... +|....+.||+||||||++|.. +|+
T Consensus 57 ~~~~~~~~~~----~~~~~~~~~~~~~gi~~~~~~~V~~id~~~~~v~~~~~~~g~~~~~~~d~lviAtG~~p~~p~i~G 132 (472)
T 3iwa_A 57 NIESLQATPY----NVVRDPEFFRINKDVEALVETRAHAIDRAAHTVEIENLRTGERRTLKYDKLVLALGSKANRPPVEG 132 (472)
T ss_dssp ----------------------------CEEECSEEEEEEETTTTEEEEEETTTCCEEEEECSEEEECCCEEECCCSCTT
T ss_pred chHHhccccc----hhccCHHHHhhhcCcEEEECCEEEEEECCCCEEEEeecCCCCEEEEECCEEEEeCCCCcCCCCCCC
Confidence 0000000000 0111112223346788765 4566666544334333 3645689999999999998854 455
Q ss_pred CccCCceEe---cchhhhccc-----CCCCeeEEEcccHHHHHHHHHHHHc-CCcEEEEEeCCCcCC-CCCHHHHHHHHH
Q 011787 194 ITIDEKRIV---SSTGALALN-----EVPKKLVVIGAGYIGLEMGSVWARL-GSEVTVVEFAADIVP-SMDGEIRKQFQR 263 (477)
Q Consensus 194 ~~~~~~~~~---~~~~~~~~~-----~~~~~v~IiG~G~~g~e~a~~l~~~-g~~Vtli~~~~~~~~-~~~~~~~~~~~~ 263 (477)
.+ ...++ +..+...+. ..+++++|||+|.+|+|+|..+++. |.+|+++++.+.+++ .+++++.+.+.+
T Consensus 133 ~~--~~~v~~~~~~~~~~~l~~~l~~~~~~~vvViGgG~~g~e~A~~l~~~~g~~Vtlv~~~~~~l~~~~~~~~~~~l~~ 210 (472)
T 3iwa_A 133 MD--LAGVTPVTNLDEAEFVQHAISAGEVSKAVIVGGGFIGLEMAVSLADMWGIDTTVVELADQIMPGFTSKSLSQMLRH 210 (472)
T ss_dssp TT--SBTEEECCSHHHHHHHHHHCCTTSCSEEEEECCSHHHHHHHHHHHHHHCCEEEEECSSSSSSTTTSCHHHHHHHHH
T ss_pred CC--CCCEEEeCCHHHHHHHHHHhhcCCCCEEEEECCCHHHHHHHHHHHHhcCCcEEEEEccCcccccccCHHHHHHHHH
Confidence 43 22233 334444443 4589999999999999999999999 999999999999999 899999999999
Q ss_pred HHHhcCcEEEeCceEEEEEEcCCeEEEEEeecCCCceEEEEcCEEEEeecCCCCCCCCCccccceeecCCCCeecCCCCC
Q 011787 264 SLEKQKMKFMLKTKVVGVDLSGDGVKLTLEPAAGGEKTILEADVVLVSAGRTPFTAGLGLDKIGVETDKMGRIPVNERFA 343 (477)
Q Consensus 264 ~l~~~gv~~~~~~~v~~i~~~~~~~~v~~~~~~~~~~~~i~~D~vi~a~G~~p~~~~l~~~~~gl~~~~~g~i~vd~~l~ 343 (477)
.+++.||+++++++|++++.+++++.+.+. +++++++|.||+|+|++|+..+ ++.+|++++++|+|.||+++|
T Consensus 211 ~l~~~GV~i~~~~~v~~i~~~~~~v~v~~~-----~g~~i~aD~Vv~a~G~~p~~~l--~~~~gl~~~~~g~i~vd~~~~ 283 (472)
T 3iwa_A 211 DLEKNDVVVHTGEKVVRLEGENGKVARVIT-----DKRTLDADLVILAAGVSPNTQL--ARDAGLELDPRGAIIVDTRMR 283 (472)
T ss_dssp HHHHTTCEEECSCCEEEEEESSSBEEEEEE-----SSCEEECSEEEECSCEEECCHH--HHHHTCCBCTTCCEECCTTCB
T ss_pred HHHhcCCEEEeCCEEEEEEccCCeEEEEEe-----CCCEEEcCEEEECCCCCcCHHH--HHhCCccCCCCCCEEECCCcc
Confidence 999999999999999999887777777665 4568999999999999999875 677899999999999999999
Q ss_pred CCCCCeEEecccC-------CC---CCchhHHHHHHHHHHHHHcCCCCCCC-CCCCceEEEcCCCeeeecCCHHHHHHcC
Q 011787 344 TNIPGVYAIGDVI-------PG---PMLAHKAEEDGVACVEFLAGKHGHVD-YDKVPGVVYTHPEVASVGKTEEQVKELG 412 (477)
Q Consensus 344 t~~~~vya~GD~~-------~~---~~~~~~A~~~g~~aa~~i~~~~~~~~-~~~~p~~~~~~~~~~~~G~~~~~~~~~~ 412 (477)
|+.|+|||+|||+ +. +.+++.|..||++||+||++...++. ....++..|++|+++++|+||+||++.|
T Consensus 284 t~~~~Iya~GD~~~~~~~~~g~~~~~~~~~~A~~~g~~aa~~i~g~~~~~~~~~~~~~~~~~~~~~a~vG~~e~~a~~~g 363 (472)
T 3iwa_A 284 TSDPDIFAGGDCVTIPNLVTGKPGFFPLGSMANRQGRVIGTNLADGDATFPGAVGSWAVKLFEGSASGAGLTVEGALREG 363 (472)
T ss_dssp CSSTTEEECGGGEEEEBTTTSSEECCCCTTHHHHHHHHHHHHHTTCCCCCCCBCCCEEEECSSCEEEEEECCHHHHHHTT
T ss_pred cCCCCEEEeccceecccccCCceeecchHHHHHHHHHHHHHHhcCCCccCCCCCcceEEEECCceeEEEECCHHHHHHcC
Confidence 9999999999998 32 35889999999999999998765432 1222345688999999999999999999
Q ss_pred CCEEEEEEecCccccchhc-CCCceEEEEEEECCCCeEEEEEEEcC---ChHHHHHHHHHHhcCC
Q 011787 413 VEYRVGKFPFLANSRAKAI-DDAEGIVKILAEKETDKILGVHIMAP---NAGELIHEAAMATHDK 473 (477)
Q Consensus 413 ~~~~~~~~~~~~~~~~~~~-~~~~~~~k~~~~~~~~~i~G~~~~g~---~~~~~~~~~~~~~~~~ 473 (477)
+++.+..+. ...++.++ ++++||+|+++|+++++|||+|++|+ .+.|+|+.+++||.++
T Consensus 364 ~~~~~~~~~--~~~~~~~~~~~~~~~~kli~~~~~~~ilG~~~~g~~~~~~~~~i~~~~~ai~~~ 426 (472)
T 3iwa_A 364 YDAVNVHVE--QFDRAHFYPEKTIMTLQLVVDRPTRRVLGIQGFSTLGDALTARINAVATMLASK 426 (472)
T ss_dssp CCEEEEEEE--C-----------CEEEEEEEETTTCBEEEEEEEESCHHHHHHHHHHHHHHHTTC
T ss_pred CceEEEEEe--cCCccCccCCCceEEEEEEEECCCCEEEEEEEECCCcccHHHHHHHHHHHHHcC
Confidence 999988754 45566666 67889999999999999999999999 5699999999999854
No 36
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=100.00 E-value=3.4e-53 Score=439.37 Aligned_cols=403 Identities=20% Similarity=0.307 Sum_probs=295.3
Q ss_pred ccCCCcceeccccccCCCCCCCCCCCcEEEECCChHHHHHHHHHHHC--CCeEEEEecCCCCCceeeccCccCchhhhhh
Q 011787 19 SNSSNGNVFKYSFSLTRGFASASDENDVVVIGGGPGGYVAAIKAAQL--GLKTTCIEKRGALGGTCLNVGCIPSKALLHS 96 (477)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~~~~~~~~dvvIIGgG~AGl~aA~~l~~~--g~~V~lie~~~~~GG~~~~~~~~p~~~l~~~ 96 (477)
.|+..|++..... .++.+.++||+|||||+||++||.+|++. |.+|+|||+++.++-. .|
T Consensus 17 ~np~~g~e~~~~~-----~~~~~~~~~VvIIGgG~AGl~aA~~L~~~~~g~~V~vie~~~~~~~~----~~--------- 78 (588)
T 3ics_A 17 GGQQMGRTLYDDD-----DKDRWGSRKIVVVGGVAGGASVAARLRRLSEEDEIIMVERGEYISFA----NC--------- 78 (588)
T ss_dssp ----------------------CCCCEEEEECCSHHHHHHHHHHHHHCSSSEEEEECSSSCSSBC----GG---------
T ss_pred cchhcCccccCcc-----cCCcccCCCEEEECCcHHHHHHHHHHHhhCcCCCEEEEECCCCcccc----CC---------
Confidence 4556666655431 12234468999999999999999999998 8999999997765410 00
Q ss_pred hHHHHHHHhhhhhCCccccccccChHHHHHHHHHHHHHHHHHHHHHhhhCCeEEEEe-EEEEecCC--EEEEEe-cCCce
Q 011787 97 SHMYHEAMHSFASHGVKFSSVEVDLPAMMAQKDKAVSNLTRGIEGLFKKNKVTYVKG-YGKFISPS--EVSVDT-IEGGN 172 (477)
Q Consensus 97 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-~~~~~~~~--~~~v~~-~~g~~ 172 (477)
. .... +.......... +...+..+.++.++++..+ .+..++.. .+.+.. .+|..
T Consensus 79 ~-lp~~----~~g~~~~~~~~-----------------~~~~~~~~~~~~gi~v~~~~~V~~id~~~~~v~v~~~~~g~~ 136 (588)
T 3ics_A 79 G-LPYY----IGGVITERQKL-----------------LVQTVERMSKRFNLDIRVLSEVVKINKEEKTITIKNVTTNET 136 (588)
T ss_dssp G-HHHH----HTTSSCCGGGG-----------------BSSCHHHHHHHTTCEEECSEEEEEEETTTTEEEEEETTTCCE
T ss_pred C-Cchh----hcCcCCChHHh-----------------hccCHHHHHHhcCcEEEECCEEEEEECCCCEEEEeecCCCCE
Confidence 0 0000 00000000000 0111233445678887654 56666544 444443 34544
Q ss_pred EEEEecEEEEccCCCCCC--CCCCccCCceEecchhhhcc--------cCCCCeeEEEcccHHHHHHHHHHHHcCCcEEE
Q 011787 173 TVVKGKNIIIATGSDVKS--LPGITIDEKRIVSSTGALAL--------NEVPKKLVVIGAGYIGLEMGSVWARLGSEVTV 242 (477)
Q Consensus 173 ~~i~~d~lvlAtG~~~~~--~~g~~~~~~~~~~~~~~~~~--------~~~~~~v~IiG~G~~g~e~a~~l~~~g~~Vtl 242 (477)
..+.||+||||||++|.. +||.. +...+++..+.... ...+++++|||+|++|+|+|..+++.|.+|++
T Consensus 137 ~~~~~d~lviAtG~~p~~p~i~G~~-~~~~v~~~~~~~~~~~~~~~l~~~~~~~vvViGgG~~g~e~A~~l~~~g~~Vtl 215 (588)
T 3ics_A 137 YNEAYDVLILSPGAKPIVPSIPGIE-EAKALFTLRNVPDTDRIKAYIDEKKPRHATVIGGGFIGVEMVENLRERGIEVTL 215 (588)
T ss_dssp EEEECSEEEECCCEEECCCCCTTTT-TCTTEEECSSHHHHHHHHHHHHHHCCSEEEEECCSHHHHHHHHHHHHTTCEEEE
T ss_pred EEEeCCEEEECCCCCCCCCCCCCcc-cCCCeEEeCCHHHHHHHHHHHhhcCCCeEEEECCCHHHHHHHHHHHhCCCeEEE
Confidence 589999999999998854 45541 23345554433322 24589999999999999999999999999999
Q ss_pred EEeCCCcCCCCCHHHHHHHHHHHHhcCcEEEeCceEEEEEEcCCeEEEEEeecCCCceEEEEcCEEEEeecCCCCCCCCC
Q 011787 243 VEFAADIVPSMDGEIRKQFQRSLEKQKMKFMLKTKVVGVDLSGDGVKLTLEPAAGGEKTILEADVVLVSAGRTPFTAGLG 322 (477)
Q Consensus 243 i~~~~~~~~~~~~~~~~~~~~~l~~~gv~~~~~~~v~~i~~~~~~~~v~~~~~~~~~~~~i~~D~vi~a~G~~p~~~~l~ 322 (477)
+++.+++++.+++++.+.+.+.+++.||+++++++|++++.+++. +.+. +++++++|.||+|+|++|++++
T Consensus 216 v~~~~~~l~~~~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~--v~~~-----~g~~i~~D~Vi~a~G~~p~~~~-- 286 (588)
T 3ics_A 216 VEMANQVMPPIDYEMAAYVHEHMKNHDVELVFEDGVDALEENGAV--VRLK-----SGSVIQTDMLILAIGVQPESSL-- 286 (588)
T ss_dssp ECSSSSSCTTSCHHHHHHHHHHHHHTTCEEECSCCEEEEEGGGTE--EEET-----TSCEEECSEEEECSCEEECCHH--
T ss_pred EecCCcccccCCHHHHHHHHHHHHHcCCEEEECCeEEEEecCCCE--EEEC-----CCCEEEcCEEEEccCCCCChHH--
Confidence 999999999999999999999999999999999999999776554 3443 5568999999999999999975
Q ss_pred ccccceeecCCCCeecCCCCCCCCCCeEEecccCC-------C---CCchhHHHHHHHHHHHHHcC-CCCCCCCCCCce-
Q 011787 323 LDKIGVETDKMGRIPVNERFATNIPGVYAIGDVIP-------G---PMLAHKAEEDGVACVEFLAG-KHGHVDYDKVPG- 390 (477)
Q Consensus 323 ~~~~gl~~~~~g~i~vd~~l~t~~~~vya~GD~~~-------~---~~~~~~A~~~g~~aa~~i~~-~~~~~~~~~~p~- 390 (477)
++..|+.++++|+|.||+++||+.|+|||+|||+. . +.+++.|..||++||+||++ ....+ ....|+
T Consensus 287 l~~~g~~~~~~g~i~vd~~~~t~~~~IyA~GD~~~~~~~~~g~~~~~~~~~~A~~~g~~aa~~i~g~~~~~~-~~~~~~~ 365 (588)
T 3ics_A 287 AKGAGLALGVRGTIKVNEKFQTSDPHIYAIGDAIEVKDFVTETETMIPLAWPANRQGRMLADIIHGHTDSLY-KGTLGTS 365 (588)
T ss_dssp HHHTTCCBCGGGCBCCCTTSBCSSTTEEECGGGBCEEBTTTCCEECCCCHHHHHHHHHHHHHHHTTCCSSCC-CCBCCCE
T ss_pred HHhcCceEcCCCCEEECCccccCCCCEEEeeeeeecccccCCcccccccHHHHHHHHHHHHHHhcCCCcccc-CCcccce
Confidence 67889999999999999999999999999999983 2 46899999999999999998 54332 223333
Q ss_pred -EEEcCCCeeeecCCHHHHHHcCCCEEEEEEecCccccchhcCCCceEEEEEEECCCCeEEEEEEEcCC-hHHHHHHHHH
Q 011787 391 -VVYTHPEVASVGKTEEQVKELGVEYRVGKFPFLANSRAKAIDDAEGIVKILAEKETDKILGVHIMAPN-AGELIHEAAM 468 (477)
Q Consensus 391 -~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~i~G~~~~g~~-~~~~~~~~~~ 468 (477)
..|++|+++++|+||+||++.|+++.+..++..... ....++++|++|+++|+++++|||+|++|++ +.|+|+.+++
T Consensus 366 ~~~~~~~~~a~vGlte~~a~~~g~~~~~~~~~~~~~~-~~~~~~~~~~~k~i~~~~~~~ilG~~~~g~~~~~e~i~~~~~ 444 (588)
T 3ics_A 366 VAKVFDLTVATTGLNEKILKRLNIPYEVVHVQANSHA-GYYPNATPVLIKLIFNKDSGKIYGAQTLGRDGVDKRMDVIAT 444 (588)
T ss_dssp EEEETTEEEEEEECCHHHHHHTTCCCEEEEEEEESSC-TTSTTCCEEEEEEEECTTTCBEEEEEEEESSSHHHHHHHHHH
T ss_pred EEEECCeEEEEecCCHHHHHHcCCCeEEEEEecCCcc-ccCCCCceEEEEEEEECCCCeEEEEEEEcCCcHHHHHHHHHH
Confidence 458899999999999999999999999886533221 2334567899999999999999999999985 8999999999
Q ss_pred HhcCC
Q 011787 469 ATHDK 473 (477)
Q Consensus 469 ~~~~~ 473 (477)
||.++
T Consensus 445 ai~~~ 449 (588)
T 3ics_A 445 AIKAN 449 (588)
T ss_dssp HHHTT
T ss_pred HHHcC
Confidence 99853
No 37
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=100.00 E-value=5.1e-53 Score=436.83 Aligned_cols=384 Identities=21% Similarity=0.300 Sum_probs=295.3
Q ss_pred CcEEEECCChHHHHHHHHHHHC--CCeEEEEecCCCCCceeeccCccCchhhhhhhHHHHHHHhhhhhCCccccccccCh
Q 011787 44 NDVVVIGGGPGGYVAAIKAAQL--GLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSVEVDL 121 (477)
Q Consensus 44 ~dvvIIGgG~AGl~aA~~l~~~--g~~V~lie~~~~~GG~~~~~~~~p~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 121 (477)
+||+|||||+||++||.+|++. +.+|+|||+++.++.. .| ... .. +.............+
T Consensus 2 ~~VvIIGgG~AGl~aA~~L~~~~~~~~V~lie~~~~~~~~----~~---------~l~-~~----~~~~~~~~~~~~~~~ 63 (565)
T 3ntd_A 2 KKILIIGGVAGGASAAARARRLSETAEIIMFERGEYVSFA----NC---------GLP-YH----ISGEIAQRSALVLQT 63 (565)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCSSSEEEEECSSSCSSBC----GG---------GHH-HH----HTSSSCCGGGGBCCC
T ss_pred CcEEEECCCHHHHHHHHHHHhhCcCCCEEEEECCCCcccc----cc---------Cch-HH----hcCCcCChHHhhccC
Confidence 6899999999999999999998 7899999997765421 00 000 00 000000000001111
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhCCeEEEE-eEEEEecCCE--EEEEe-cCCceEEEEecEEEEccCCCCCC--CCCCc
Q 011787 122 PAMMAQKDKAVSNLTRGIEGLFKKNKVTYVK-GYGKFISPSE--VSVDT-IEGGNTVVKGKNIIIATGSDVKS--LPGIT 195 (477)
Q Consensus 122 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~-~~~~~~~~~~--~~v~~-~~g~~~~i~~d~lvlAtG~~~~~--~~g~~ 195 (477)
...+.++.++++.. .++..++... +.+.. .+|...++.||+||||||++|.. +||.+
T Consensus 64 -----------------~~~~~~~~~i~~~~~~~V~~id~~~~~v~~~~~~~g~~~~~~~d~lviAtG~~p~~p~ipG~~ 126 (565)
T 3ntd_A 64 -----------------PESFKARFNVEVRVKHEVVAIDRAAKLVTVRRLLDGSEYQESYDTLLLSPGAAPIVPPIPGVD 126 (565)
T ss_dssp -----------------HHHHHHHHCCEEETTEEEEEEETTTTEEEEEETTTCCEEEEECSEEEECCCEEECCCCCTTCC
T ss_pred -----------------HHHHHHhcCcEEEECCEEEEEECCCCEEEEEecCCCCeEEEECCEEEECCCCCCCCCCCCCCC
Confidence 11223335788754 4566676544 44432 23545689999999999998854 44543
Q ss_pred cCCceEecchh---hhcc-----cCCCCeeEEEcccHHHHHHHHHHHHcCCcEEEEEeCCCcCCCCCHHHHHHHHHHHHh
Q 011787 196 IDEKRIVSSTG---ALAL-----NEVPKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIVPSMDGEIRKQFQRSLEK 267 (477)
Q Consensus 196 ~~~~~~~~~~~---~~~~-----~~~~~~v~IiG~G~~g~e~a~~l~~~g~~Vtli~~~~~~~~~~~~~~~~~~~~~l~~ 267 (477)
...+++..+ ...+ ...+++++|||+|++|+|+|..+++.|.+|+++++.+++++.+++++.+.+.+.+++
T Consensus 127 --~~~v~~~~~~~~~~~l~~~~~~~~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~l~~~l~~ 204 (565)
T 3ntd_A 127 --NPLTHSLRNIPDMDRILQTIQMNNVEHATVVGGGFIGLEMMESLHHLGIKTTLLELADQVMTPVDREMAGFAHQAIRD 204 (565)
T ss_dssp --STTEECCSSHHHHHHHHHHHHHTTCSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSCTTSCHHHHHHHHHHHHH
T ss_pred --CCCEEEeCCHHHHHHHHHHHhhCCCCEEEEECCCHHHHHHHHHHHhcCCcEEEEEcCCccchhcCHHHHHHHHHHHHH
Confidence 334444333 2222 245899999999999999999999999999999999999999999999999999999
Q ss_pred cCcEEEeCceEEEEEE-------------------cCCeEEEEEeecCCCceEEEEcCEEEEeecCCCCCCCCCccccce
Q 011787 268 QKMKFMLKTKVVGVDL-------------------SGDGVKLTLEPAAGGEKTILEADVVLVSAGRTPFTAGLGLDKIGV 328 (477)
Q Consensus 268 ~gv~~~~~~~v~~i~~-------------------~~~~~~v~~~~~~~~~~~~i~~D~vi~a~G~~p~~~~l~~~~~gl 328 (477)
.||++++++.+++++. .++++.+.+. +++++++|.||+|+|++|++.+ ++..|+
T Consensus 205 ~GV~i~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~-----~g~~i~~D~vi~a~G~~p~~~l--~~~~g~ 277 (565)
T 3ntd_A 205 QGVDLRLGTALSEVSYQVQTHVASDAAGEDTAHQHIKGHLSLTLS-----NGELLETDLLIMAIGVRPETQL--ARDAGL 277 (565)
T ss_dssp TTCEEEETCCEEEEEEECCCCCCCGGGTCCCTTCCTTCEEEEEET-----TSCEEEESEEEECSCEEECCHH--HHHHTC
T ss_pred CCCEEEeCCeEEEEeccccccccccccccccccccCCCcEEEEEc-----CCCEEEcCEEEECcCCccchHH--HHhCCc
Confidence 9999999999999987 3556666653 4568999999999999999875 677889
Q ss_pred eecCCCCeecCCCCCCCCCCeEEecccCC-------C---CCchhHHHHHHHHHHHHHcCCCCCCCC-CCCceEEEcCCC
Q 011787 329 ETDKMGRIPVNERFATNIPGVYAIGDVIP-------G---PMLAHKAEEDGVACVEFLAGKHGHVDY-DKVPGVVYTHPE 397 (477)
Q Consensus 329 ~~~~~g~i~vd~~l~t~~~~vya~GD~~~-------~---~~~~~~A~~~g~~aa~~i~~~~~~~~~-~~~p~~~~~~~~ 397 (477)
.++++|+|.||+++||+.|+|||+|||+. . +.+++.|..||++||+||++....++. ...+...|++|+
T Consensus 278 ~~~~~g~i~vd~~~~t~~~~IyA~GD~~~~~~~~~g~~~~~~~~~~A~~~g~~aa~~i~g~~~~~~~~~~~~~~~~~~~~ 357 (565)
T 3ntd_A 278 AIGELGGIKVNAMMQTSDPAIYAVGDAVEEQDFVTGQACLVPLAGPANRQGRMAADNMFGREERYQGTQGTAICKVFDLA 357 (565)
T ss_dssp CBCTTSSBCCCTTCBCSSTTEEECGGGBCEEBTTTCCEECCCCHHHHHHHHHHHHHHHTTCCCCCCCBCCCEEEEETTEE
T ss_pred ccCCCCCEEECCCcccCCCCEEEeeeeEeeccccCCceeecccHHHHHHHHHHHHHHhcCCCccCCCcccceEEEEcCcE
Confidence 99999999999999999999999999983 2 357899999999999999987654322 233456688999
Q ss_pred eeeecCCHHHHHHcCCCEEEEEEecCccccchhc-CCCceEEEEEEECCCCeEEEEEEEcCCh-HHHHHHHHHHhcCC
Q 011787 398 VASVGKTEEQVKELGVEYRVGKFPFLANSRAKAI-DDAEGIVKILAEKETDKILGVHIMAPNA-GELIHEAAMATHDK 473 (477)
Q Consensus 398 ~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~k~~~~~~~~~i~G~~~~g~~~-~~~~~~~~~~~~~~ 473 (477)
++++|++|+||++.|+++.+..+. ...++.++ +++++|+|+++|+++++|||+|++|+++ .|+|+.+++||.++
T Consensus 358 ~~~vG~~e~~a~~~g~~~~~~~~~--~~~~~~~~~~~~~~~~k~v~~~~~~~ilG~~~~g~~a~~e~i~~~~~ai~~~ 433 (565)
T 3ntd_A 358 VGATGKNEKQLKQAGIAFEKVYVH--TASHASYYPGAEVVSFKLLFDPVKGTIFGAQAVGKDGIDKRIDVMAVAQRAG 433 (565)
T ss_dssp EEEEECCHHHHHHTTCCCEEEEEE--EESSCTTSTTCCEEEEEEEECTTTCBEEEEEEEESSSHHHHHHHHHHHHHTT
T ss_pred EEEecCCHHHHHHcCCCeEEEEEe--cCcccCcCCCCceEEEEEEEECCCCEEEEEEEECCccHHHHHHHHHHHHHcC
Confidence 999999999999999998876643 44555565 6678999999999999999999999999 99999999999754
No 38
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=100.00 E-value=1.4e-51 Score=416.36 Aligned_cols=381 Identities=22% Similarity=0.274 Sum_probs=295.7
Q ss_pred CCcEEEECCChHHHHHHHHHHHC--CCeEEEEecCCCCCceeeccCc-cCchhhhhhhHHHHHHHhhhhhCCcccccccc
Q 011787 43 ENDVVVIGGGPGGYVAAIKAAQL--GLKTTCIEKRGALGGTCLNVGC-IPSKALLHSSHMYHEAMHSFASHGVKFSSVEV 119 (477)
Q Consensus 43 ~~dvvIIGgG~AGl~aA~~l~~~--g~~V~lie~~~~~GG~~~~~~~-~p~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~ 119 (477)
++||+|||||+||++||..|++. |.+|+|||+++..++. .| +|. . +.....
T Consensus 36 ~~dvvIIG~G~aGl~aA~~l~~~~~g~~V~lie~~~~~~~~----~~~~~~------------~---~~~~~~------- 89 (480)
T 3cgb_A 36 SMNYVIIGGDAAGMSAAMQIVRNDENANVVTLEKGEIYSYA----QCGLPY------------V---ISGAIA------- 89 (480)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHHCTTCEEEEECSSSCCSBC----GGGHHH------------H---HTTSSS-------
T ss_pred cceEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCCCCCC----CCCcch------------h---hcCCcC-------
Confidence 46999999999999999999996 8999999997665421 11 110 0 000000
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHHh-hhCCeEEEEe-EEEEecC--CEEEEEe-cCCceEEEEecEEEEccCCCCCCC--C
Q 011787 120 DLPAMMAQKDKAVSNLTRGIEGLF-KKNKVTYVKG-YGKFISP--SEVSVDT-IEGGNTVVKGKNIIIATGSDVKSL--P 192 (477)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~-~~~~~~~--~~~~v~~-~~g~~~~i~~d~lvlAtG~~~~~~--~ 192 (477)
++..+.. ...+.+ +..+++++.+ .+..++. +.+.+.. .+|+..++.||+||||||++|..+ |
T Consensus 90 ~~~~l~~-----------~~~~~~~~~~gv~~~~~~~v~~i~~~~~~v~v~~~~~g~~~~~~~d~lviAtG~~p~~p~i~ 158 (480)
T 3cgb_A 90 STEKLIA-----------RNVKTFRDKYGIDAKVRHEVTKVDTEKKIVYAEHTKTKDVFEFSYDRLLIATGVRPVMPEWE 158 (480)
T ss_dssp CGGGGBS-----------SCHHHHHHTTCCEEESSEEEEEEETTTTEEEEEETTTCCEEEEECSEEEECCCEEECCCCCB
T ss_pred CHHHhhh-----------cCHHHHHhhcCCEEEeCCEEEEEECCCCEEEEEEcCCCceEEEEcCEEEECCCCcccCCCCC
Confidence 0111000 001122 3458998875 5666653 4555554 345334799999999999988543 4
Q ss_pred CCccCCceEec---chhhhcccC-----CCCeeEEEcccHHHHHHHHHHHHcCCcEEEEEeCCCcCCCCCHHHHHHHHHH
Q 011787 193 GITIDEKRIVS---STGALALNE-----VPKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIVPSMDGEIRKQFQRS 264 (477)
Q Consensus 193 g~~~~~~~~~~---~~~~~~~~~-----~~~~v~IiG~G~~g~e~a~~l~~~g~~Vtli~~~~~~~~~~~~~~~~~~~~~ 264 (477)
+.+ ...+++ .++...+.. .+++++|||+|++|+|+|..+++.|.+|+++++.+.+++.+++++.+.+.+.
T Consensus 159 G~~--~~~v~~~~~~~~~~~l~~~~~~~~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~l~~~ 236 (480)
T 3cgb_A 159 GRD--LQGVHLLKTIPDAERILKTLETNKVEDVTIIGGGAIGLEMAETFVELGKKVRMIERNDHIGTIYDGDMAEYIYKE 236 (480)
T ss_dssp TTT--SBTEECCSSHHHHHHHHHHHHSSCCCEEEEECCHHHHHHHHHHHHHTTCEEEEECCGGGTTSSSCHHHHHHHHHH
T ss_pred Ccc--CCCEEEeCCHHHHHHHHHHhhhcCCCeEEEECCCHHHHHHHHHHHhcCCeEEEEEeCCchhhcCCHHHHHHHHHH
Confidence 433 233443 445444433 6899999999999999999999999999999999999999999999999999
Q ss_pred HHhcCcEEEeCceEEEEEEcCCeE-EEEEeecCCCceEEEEcCEEEEeecCCCCCCCCCccccceeecCCCCeecCCCCC
Q 011787 265 LEKQKMKFMLKTKVVGVDLSGDGV-KLTLEPAAGGEKTILEADVVLVSAGRTPFTAGLGLDKIGVETDKMGRIPVNERFA 343 (477)
Q Consensus 265 l~~~gv~~~~~~~v~~i~~~~~~~-~v~~~~~~~~~~~~i~~D~vi~a~G~~p~~~~l~~~~~gl~~~~~g~i~vd~~l~ 343 (477)
+++.||+++++++|++++.++ ++ .+.+ ++.++++|.||+|+|++|+.+. ++..|++++++|+|.||+++|
T Consensus 237 l~~~Gv~i~~~~~v~~i~~~~-~v~~v~~------~~~~i~~D~vi~a~G~~p~~~~--l~~~g~~~~~~G~I~Vd~~~~ 307 (480)
T 3cgb_A 237 ADKHHIEILTNENVKAFKGNE-RVEAVET------DKGTYKADLVLVSVGVKPNTDF--LEGTNIRTNHKGAIEVNAYMQ 307 (480)
T ss_dssp HHHTTCEEECSCCEEEEEESS-BEEEEEE------TTEEEECSEEEECSCEEESCGG--GTTSCCCBCTTSCBCCCTTSB
T ss_pred HHHcCcEEEcCCEEEEEEcCC-cEEEEEE------CCCEEEcCEEEECcCCCcChHH--HHhCCcccCCCCCEEECCCcc
Confidence 999999999999999998753 33 2333 2358999999999999999875 678889998889999999999
Q ss_pred CCCCCeEEecccCCC----------CCchhHHHHHHHHHHHHHcCCCCCC-CCCCCceEEEcCCCeeeecCCHHHHHHcC
Q 011787 344 TNIPGVYAIGDVIPG----------PMLAHKAEEDGVACVEFLAGKHGHV-DYDKVPGVVYTHPEVASVGKTEEQVKELG 412 (477)
Q Consensus 344 t~~~~vya~GD~~~~----------~~~~~~A~~~g~~aa~~i~~~~~~~-~~~~~p~~~~~~~~~~~~G~~~~~~~~~~ 412 (477)
|+.|+|||+|||+.. +.+++.|..||++||+||++...++ .+...|++.|++|+++++|+++++++..+
T Consensus 308 ts~p~IyA~GD~~~~~~~~~g~~~~~~~~~~A~~qg~~aa~~i~g~~~~~~~~~~~~~~~~~~~~~~~vG~~~~~a~~~g 387 (480)
T 3cgb_A 308 TNVQDVYAAGDCATHYHVIKEIHDHIPIGTTANKQGRLAGLNMLDKRRAFKGTLGTGIIKFMNLTLARTGLNEKEAKGLH 387 (480)
T ss_dssp CSSTTEEECGGGBCEEBTTTCSEECCCCHHHHHHHHHHHHHHHTTCCCCCCCBCCCEEEEETTEEEEEEECCHHHHHHTT
T ss_pred CCCCCEEEeeeEEEecCCCCCcceecchHHHHHHHHHHHHHHhcCCCccCCCccceeEEEECCcEEEEeCCCHHHHHHcC
Confidence 999999999999942 2579999999999999999865443 35567899999999999999999999999
Q ss_pred CCEEEEEEecCccccchhc-CCCceEEEEEEECCCCeEEEEEEEcCC-hHHHHHHHHHHhcCC
Q 011787 413 VEYRVGKFPFLANSRAKAI-DDAEGIVKILAEKETDKILGVHIMAPN-AGELIHEAAMATHDK 473 (477)
Q Consensus 413 ~~~~~~~~~~~~~~~~~~~-~~~~~~~k~~~~~~~~~i~G~~~~g~~-~~~~~~~~~~~~~~~ 473 (477)
+++.+..+.. ..++... +++.+|+|+++|+++++|+|++++|+. +.|+|+.+++||.++
T Consensus 388 ~~~~~~~~~~--~~~~~~~~~~~~~~~kl~~~~~~~~ilG~~~vg~~~a~e~i~~~~~ai~~~ 448 (480)
T 3cgb_A 388 IPYKTVKVDS--TNMAGYYPNAKPLYLKLLYRSDTKQLLGGQVIGEEGVDKRIDVIAMALFNK 448 (480)
T ss_dssp CCEEEEEEEE--ESSCTTSTTCCEEEEEEEEETTTCBEEEEEEEESSSHHHHHHHHHHHHHTT
T ss_pred CceEEEEEec--CCcccccCCCceEEEEEEEECCCCEEEEEEEECCccHHHHHHHHHHHHHcC
Confidence 9998877544 3344433 456799999999889999999999999 999999999999854
No 39
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=100.00 E-value=7.6e-52 Score=415.87 Aligned_cols=384 Identities=16% Similarity=0.187 Sum_probs=295.2
Q ss_pred CcEEEECCChHHHHHHHHHHHC--CCeEEEEecCCCCCceeeccCccCchhhhhhhHHHHHHHhhhhhCCccccccccCh
Q 011787 44 NDVVVIGGGPGGYVAAIKAAQL--GLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSVEVDL 121 (477)
Q Consensus 44 ~dvvIIGgG~AGl~aA~~l~~~--g~~V~lie~~~~~GG~~~~~~~~p~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 121 (477)
+||+|||||+||++||..|++. |.+|+|||+++.++. .+| .. ......... .+.+......
T Consensus 1 ~dvvIIGgG~aGl~aA~~l~~~~~g~~V~lie~~~~~~~----~~~---~~-------~~~~~g~~~--~~~~~~~~~~- 63 (452)
T 2cdu_A 1 MKVIVVGCTHAGTFAVKQTIADHPDADVTAYEMNDNISF----LSC---GI-------ALYLGKEIK--NNDPRGLFYS- 63 (452)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTCEEEEEESSSCCCB----CGG---GH-------HHHHTTCBG--GGCGGGGBSC-
T ss_pred CeEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCCCCc----ccc---cc-------hhhhcCCcc--cCCHHHhhhc-
Confidence 5899999999999999999998 999999999765532 111 00 000000000 0001111011
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhCCeEEEEeE-EEEec--CCEEEEEec-CCceEEEEecEEEEccCCCCCCC--CCCc
Q 011787 122 PAMMAQKDKAVSNLTRGIEGLFKKNKVTYVKGY-GKFIS--PSEVSVDTI-EGGNTVVKGKNIIIATGSDVKSL--PGIT 195 (477)
Q Consensus 122 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~~--~~~~~v~~~-~g~~~~i~~d~lvlAtG~~~~~~--~g~~ 195 (477)
....+++.+++++.+. +..++ .+.+.+... +++..++.||+||||||++|..+ |+.+
T Consensus 64 -----------------~~~~~~~~gv~~~~~~~v~~i~~~~~~v~v~~~~~g~~~~~~~d~lviAtGs~p~~p~i~g~~ 126 (452)
T 2cdu_A 64 -----------------SPEELSNLGANVQMRHQVTNVDPETKTIKVKDLITNEEKTEAYDKLIMTTGSKPTVPPIPGID 126 (452)
T ss_dssp -----------------CHHHHHHTTCEEEESEEEEEEEGGGTEEEEEETTTCCEEEEECSEEEECCCEEECCCCCTTTT
T ss_pred -----------------CHHHHHHcCCEEEeCCEEEEEEcCCCEEEEEecCCCceEEEECCEEEEccCCCcCCCCCCCCC
Confidence 1233456789987764 66665 445555431 23347899999999999988543 4443
Q ss_pred cCCceEecc------hhhhcccCCCCeeEEEcccHHHHHHHHHHHHcCCcEEEEEeCCCcCC-CCCHHHHHHHHHHHHhc
Q 011787 196 IDEKRIVSS------TGALALNEVPKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIVP-SMDGEIRKQFQRSLEKQ 268 (477)
Q Consensus 196 ~~~~~~~~~------~~~~~~~~~~~~v~IiG~G~~g~e~a~~l~~~g~~Vtli~~~~~~~~-~~~~~~~~~~~~~l~~~ 268 (477)
...+++. .++......+++++|||+|++|+|+|..+++.|.+|+++++.+++++ .+++++.+.+.+.+++.
T Consensus 127 --~~~v~~~~~~~~~~~~~~~~~~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~~l~~~l~~~ 204 (452)
T 2cdu_A 127 --SSRVYLCKNYNDAKKLFEEAPKAKTITIIGSGYIGAELAEAYSNQNYNVNLIDGHERVLYKYFDKEFTDILAKDYEAH 204 (452)
T ss_dssp --STTEEECSSHHHHHHHHHHGGGCSEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSSTTTTTSCHHHHHHHHHHHHHT
T ss_pred --CCCEEEeCcHHHHHHHHHHhccCCeEEEECcCHHHHHHHHHHHhcCCEEEEEEcCCchhhhhhhhhHHHHHHHHHHHC
Confidence 2334433 23333445689999999999999999999999999999999999988 79999999999999999
Q ss_pred CcEEEeCceEEEEEEcCCeEEEEEeecCCCceEEEEcCEEEEeecCCCCCCCCCccccceeecCCCCeecCCCCCCCCCC
Q 011787 269 KMKFMLKTKVVGVDLSGDGVKLTLEPAAGGEKTILEADVVLVSAGRTPFTAGLGLDKIGVETDKMGRIPVNERFATNIPG 348 (477)
Q Consensus 269 gv~~~~~~~v~~i~~~~~~~~v~~~~~~~~~~~~i~~D~vi~a~G~~p~~~~l~~~~~gl~~~~~g~i~vd~~l~t~~~~ 348 (477)
||+++++++|++++.+++++..... +++++++|.|++|+|++||+++ ++.. ++++++|+|.||+++||+.|+
T Consensus 205 Gv~i~~~~~v~~i~~~~~~v~~v~~-----~g~~i~~D~vv~a~G~~p~~~l--l~~~-l~~~~~G~i~Vd~~~~t~~~~ 276 (452)
T 2cdu_A 205 GVNLVLGSKVAAFEEVDDEIITKTL-----DGKEIKSDIAILCIGFRPNTEL--LKGK-VAMLDNGAIITDEYMHSSNRD 276 (452)
T ss_dssp TCEEEESSCEEEEEEETTEEEEEET-----TSCEEEESEEEECCCEEECCGG--GTTT-SCBCTTSCBCCCTTSBCSSTT
T ss_pred CCEEEcCCeeEEEEcCCCeEEEEEe-----CCCEEECCEEEECcCCCCCHHH--HHHh-hhcCCCCCEEECCCcCcCCCC
Confidence 9999999999999875565542221 3468999999999999999985 5666 888888999999999999999
Q ss_pred eEEecccCCC----------CCchhHHHHHHHHHHHHHcCCCCCC-CCCCCceEEEcCCCeeeecCCHHHHHHcCCCEEE
Q 011787 349 VYAIGDVIPG----------PMLAHKAEEDGVACVEFLAGKHGHV-DYDKVPGVVYTHPEVASVGKTEEQVKELGVEYRV 417 (477)
Q Consensus 349 vya~GD~~~~----------~~~~~~A~~~g~~aa~~i~~~~~~~-~~~~~p~~~~~~~~~~~~G~~~~~~~~~~~~~~~ 417 (477)
|||+|||+.. +.+++.|..||++||+||++...+. .+...|+..+++|+++++|+++++++..++++.+
T Consensus 277 IyA~GD~~~~~~~~~g~~~~~~~~~~A~~~g~~aa~~i~g~~~~~~~~~~~~~~~~~~~~~~~vG~~~~~a~~~g~~~~~ 356 (452)
T 2cdu_A 277 IFAAGDSAAVHYNPTNSNAYIPLATNAVRQGRLVGLNLTEDKVKDMGTQSSSGLKLYGRTYVSTGINTALAKANNLKVSE 356 (452)
T ss_dssp EEECSTTBCEEETTTTEEECCCCHHHHHHHHHHHHHTSSSCCCCCCCBCCCEEEEETTEEEEEEECCHHHHHHTTCCCEE
T ss_pred EEEcceEEEeccccCCCeeecchHHHHHHHHHHHHHHhCCCCCcCCCccceEEEEECCeeeEeecCCHHHHHHcCCceEE
Confidence 9999999973 3689999999999999999865332 2344567788899999999999999999999887
Q ss_pred EEEecCccccchhc-CCCceEEEEEEECCCCeEEEEEEEcC-ChHHHHHHHHHHhcCC
Q 011787 418 GKFPFLANSRAKAI-DDAEGIVKILAEKETDKILGVHIMAP-NAGELIHEAAMATHDK 473 (477)
Q Consensus 418 ~~~~~~~~~~~~~~-~~~~~~~k~~~~~~~~~i~G~~~~g~-~~~~~~~~~~~~~~~~ 473 (477)
.. +....++..+ +++.+++|+++|+++++|+|+|++|+ ++.|+|+.+++||.++
T Consensus 357 ~~--~~~~~~~~~~~~~~~~~~k~~~~~~~~~ilG~~~~g~~~~~~~i~~~~~ai~~~ 412 (452)
T 2cdu_A 357 VI--IADNYRPEFMLSTDEVLMSLVYDPKTRVILGGALSSMHDVSQSANVLSVCIQNK 412 (452)
T ss_dssp EE--EEEESSCTTBSCCCEEEEEEEECTTTCBEEEEEEEESSCCHHHHHHHHHHHHTT
T ss_pred EE--EecCCccccCCCCceEEEEEEEECCCCEEEEEEEEcCccHHHHHHHHHHHHHcC
Confidence 74 5556666665 45679999999988999999999999 8999999999999754
No 40
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=100.00 E-value=1.5e-51 Score=417.32 Aligned_cols=382 Identities=22% Similarity=0.295 Sum_probs=291.4
Q ss_pred CCcEEEECCChHHHHHHHHHHHCC---CeEEEEecCCCCCceeeccCccCchhhhhhhHHHHHHHhhhhhCCcccccccc
Q 011787 43 ENDVVVIGGGPGGYVAAIKAAQLG---LKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSVEV 119 (477)
Q Consensus 43 ~~dvvIIGgG~AGl~aA~~l~~~g---~~V~lie~~~~~GG~~~~~~~~p~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~ 119 (477)
++||+|||||+||++||..|++.| .+|+|||+++.++. .+|. + . . .+...-..+.....
T Consensus 35 ~~dvvIIGaG~aGl~aA~~l~~~g~~~~~V~lie~~~~~~~----~~~~----~-----~-~----~~~~~~~~~~~~~~ 96 (490)
T 2bc0_A 35 GSKIVVVGANHAGTACIKTMLTNYGDANEIVVFDQNSNISF----LGAG----M-----A-L----WIGEQIAGPEGLFY 96 (490)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHHGGGSEEEEECSSSCCSB----CGGG----H-----H-H----HHTTSSSCSGGGBS
T ss_pred CCcEEEECCCHHHHHHHHHHHhcCCCCCeEEEEECCCCCCc----cccc----c-----c-h----hhcCccCCHHHhhh
Confidence 489999999999999999999987 99999999765542 1110 0 0 0 00000000111111
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHHhhhCCeEEEEeE-EEEecCCEEEEEec-CCceEEEEecEEEEccCCCCCCC--CCCc
Q 011787 120 DLPAMMAQKDKAVSNLTRGIEGLFKKNKVTYVKGY-GKFISPSEVSVDTI-EGGNTVVKGKNIIIATGSDVKSL--PGIT 195 (477)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~~~~~~~v~~~-~g~~~~i~~d~lvlAtG~~~~~~--~g~~ 195 (477)
. ..+.+++.+++++.+. +..++.....+... ++...++.||+||||||++|..+ |+.+
T Consensus 97 ~------------------~~~~~~~~gv~v~~~~~v~~i~~~~~~v~v~~~g~~~~~~~d~lviAtG~~p~~p~i~G~~ 158 (490)
T 2bc0_A 97 S------------------DKEELESLGAKVYMESPVQSIDYDAKTVTALVDGKNHVETYDKLIFATGSQPILPPIKGAE 158 (490)
T ss_dssp C------------------CHHHHHHTTCEEETTCCEEEEETTTTEEEEEETTEEEEEECSEEEECCCEEECCCSCBTCC
T ss_pred c------------------CHHHHHhCCCEEEeCCEEEEEECCCCEEEEEeCCcEEEEECCEEEECCCCCcCCCCCCCcc
Confidence 1 1123455788886654 66676433333333 44346799999999999988543 4433
Q ss_pred c-------C--CceEecc------hhhhccc--CCCCeeEEEcccHHHHHHHHHHHHcCCcEEEEEeCCCcCC-CCCHHH
Q 011787 196 I-------D--EKRIVSS------TGALALN--EVPKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIVP-SMDGEI 257 (477)
Q Consensus 196 ~-------~--~~~~~~~------~~~~~~~--~~~~~v~IiG~G~~g~e~a~~l~~~g~~Vtli~~~~~~~~-~~~~~~ 257 (477)
. . ...+++. .++.... ..+++++|||+|++|+|+|..|++.|.+|+++++.+++++ .+++++
T Consensus 159 ~~~~~~~f~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~vvVIGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~ 238 (490)
T 2bc0_A 159 IKEGSLEFEATLENLQFVKLYQNSADVIAKLENKDIKRVAVVGAGYIGVELAEAFQRKGKEVVLIDVVDTCLAGYYDRDL 238 (490)
T ss_dssp BCTTCTTCCBSSTTEEECSSHHHHHHHHHHTTSTTCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSTTTTTSCHHH
T ss_pred ccccccccccccCCEEEeCCHHHHHHHHHHhhhcCCceEEEECCCHHHHHHHHHHHHCCCeEEEEEcccchhhhHHHHHH
Confidence 0 0 2334442 2333333 5689999999999999999999999999999999999988 799999
Q ss_pred HHHHHHHHHhcCcEEEeCceEEEEEEcCCeE-EEEEeecCCCceEEEEcCEEEEeecCCCCCCCCCccccceeecCCCCe
Q 011787 258 RKQFQRSLEKQKMKFMLKTKVVGVDLSGDGV-KLTLEPAAGGEKTILEADVVLVSAGRTPFTAGLGLDKIGVETDKMGRI 336 (477)
Q Consensus 258 ~~~~~~~l~~~gv~~~~~~~v~~i~~~~~~~-~v~~~~~~~~~~~~i~~D~vi~a~G~~p~~~~l~~~~~gl~~~~~g~i 336 (477)
.+.+.+.+++.||+++++++|++++. ++++ .+.+ +++++++|.||+|+|++||+++ ++.. ++++++|+|
T Consensus 239 ~~~l~~~l~~~GV~i~~~~~v~~i~~-~~~v~~v~~------~g~~i~~D~Vi~a~G~~p~~~l--l~~~-l~~~~~G~I 308 (490)
T 2bc0_A 239 TDLMAKNMEEHGIQLAFGETVKEVAG-NGKVEKIIT------DKNEYDVDMVILAVGFRPNTTL--GNGK-IDLFRNGAF 308 (490)
T ss_dssp HHHHHHHHHTTTCEEEETCCEEEEEC-SSSCCEEEE------SSCEEECSEEEECCCEEECCGG--GTTC-SCBCTTSCB
T ss_pred HHHHHHHHHhCCeEEEeCCEEEEEEc-CCcEEEEEE------CCcEEECCEEEECCCCCcChHH--HHhh-hccCCCCCE
Confidence 99999999999999999999999986 3333 2443 3468999999999999999985 5565 788888999
Q ss_pred ecCCCCCCCCCCeEEecccCCC----------CCchhHHHHHHHHHHHHHcCCCCCC-CCCCCceEEEcCCCeeeecCCH
Q 011787 337 PVNERFATNIPGVYAIGDVIPG----------PMLAHKAEEDGVACVEFLAGKHGHV-DYDKVPGVVYTHPEVASVGKTE 405 (477)
Q Consensus 337 ~vd~~l~t~~~~vya~GD~~~~----------~~~~~~A~~~g~~aa~~i~~~~~~~-~~~~~p~~~~~~~~~~~~G~~~ 405 (477)
.||+++||+.|+|||+|||+.. +.+++.|..||++||.||++...+. .+...++..+++|+++++|+++
T Consensus 309 ~Vd~~~~t~~~~IyA~GD~~~~~~~~~g~~~~~~~~~~A~~qg~~aa~~i~g~~~~~~~~~~~~~~~~~~~~~~~vG~~~ 388 (490)
T 2bc0_A 309 LVNKRQETSIPGVYAIGDCATIYDNATRDTNYIALASNAVRTGIVAAHNACGTDLEGIGVQGSNGISIYGLHMVSTGLTL 388 (490)
T ss_dssp CCCTTCBCSSTTEEECGGGBCEEETTTTEEECCCCHHHHHHHHHHHHHHHTTCCCCCCCBCCCEEEEETTEEEEEEECCH
T ss_pred EECCCcccCCCCEEEeeeeEEeccccCCceeecccHHHHHHHHHHHHHHhcCCCCCCCCcccceEEEECCcEeEEeeCCH
Confidence 9999999999999999999963 3689999999999999999865322 2334556667799999999999
Q ss_pred HHHHHcCCCEEEEEEecCccccchhcC--CCceEEEEEEECCCCeEEEEEEEcC-ChHHHHHHHHHHhcC
Q 011787 406 EQVKELGVEYRVGKFPFLANSRAKAID--DAEGIVKILAEKETDKILGVHIMAP-NAGELIHEAAMATHD 472 (477)
Q Consensus 406 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~k~~~~~~~~~i~G~~~~g~-~~~~~~~~~~~~~~~ 472 (477)
++++..|+++.+.. +....++.+.+ ++.+++|+++|+++++|+|++++|+ ++.|+|+.+++||.+
T Consensus 389 ~~a~~~g~~~~~~~--~~~~~~~~~~~~~~~~~~~kl~~~~~~~~ilG~~~~g~~~a~e~i~~~~~ai~~ 456 (490)
T 2bc0_A 389 EKAKRLGFDAAVTE--YTDNQKPEFIEHGNFPVTIKIVYDKDSRRILGAQMAAREDVSMGIHMFSLAIQE 456 (490)
T ss_dssp HHHHHTTCCEEEEE--EEEESSCTTCCSSCCEEEEEEEEETTTCBEEEEEEEESSCCTTHHHHHHHHHHH
T ss_pred HHHHHcCCceEEEE--EecCCcccccCCCCceEEEEEEEECCCCEEEEEEEEcCcCHHHHHHHHHHHHHc
Confidence 99999999988873 55566666654 5679999999998999999999999 899999999999974
No 41
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=100.00 E-value=6.7e-51 Score=408.39 Aligned_cols=380 Identities=24% Similarity=0.304 Sum_probs=292.2
Q ss_pred CcEEEECCChHHHHHHHHHHHC--CCeEEEEecCCCCCceeeccCccCchhhhhhhHHHHHHHhhhhhCCccccccccCh
Q 011787 44 NDVVVIGGGPGGYVAAIKAAQL--GLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSVEVDL 121 (477)
Q Consensus 44 ~dvvIIGgG~AGl~aA~~l~~~--g~~V~lie~~~~~GG~~~~~~~~p~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 121 (477)
+||+|||||+||++||..|++. |.+|+|||+++.+|. .+| .. . .. +.............
T Consensus 1 ~dvvIIG~G~aGl~aA~~l~~~~~g~~V~lie~~~~~~~----~~~---~~------~-~~----~~~~~~~~~~~~~~- 61 (447)
T 1nhp_A 1 MKVIVLGSSHGGYEAVEELLNLHPDAEIQWYEKGDFISF----LSA---GM------Q-LY----LEGKVKDVNSVRYM- 61 (447)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCTTSEEEEEESSSSSSB----CGG---GH------H-HH----HTTSSCCGGGSBSC-
T ss_pred CeEEEECCCHHHHHHHHHHHHhCcCCeEEEEECCCccCc----ccc---cc------h-hh----hcCccCCHHHhhcC-
Confidence 4899999999999999999997 899999999765542 111 00 0 00 00000001111000
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhCCeEEEEeE-EEEec--CCEEEEEe-cCCceEEEEecEEEEccCCCCCCC--CCCc
Q 011787 122 PAMMAQKDKAVSNLTRGIEGLFKKNKVTYVKGY-GKFIS--PSEVSVDT-IEGGNTVVKGKNIIIATGSDVKSL--PGIT 195 (477)
Q Consensus 122 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~~--~~~~~v~~-~~g~~~~i~~d~lvlAtG~~~~~~--~g~~ 195 (477)
....+++.+++++.+. +..++ .+.+.+.. .+|+..++.||+||||||++|..+ ||.+
T Consensus 62 -----------------~~~~~~~~gv~~~~~~~v~~i~~~~~~v~~~~~~~g~~~~~~~d~lviAtG~~p~~p~i~G~~ 124 (447)
T 1nhp_A 62 -----------------TGEKMESRGVNVFSNTEITAIQPKEHQVTVKDLVSGEERVENYDKLIISPGAVPFELDIPGKD 124 (447)
T ss_dssp -----------------CHHHHHHTTCEEEETEEEEEEETTTTEEEEEETTTCCEEEEECSEEEECCCEEECCCCSTTTT
T ss_pred -----------------CHHHHHHCCCEEEECCEEEEEeCCCCEEEEEecCCCceEEEeCCEEEEcCCCCcCCCCCCCCC
Confidence 1233455789987664 44564 44555543 335334699999999999988543 4433
Q ss_pred cCCceEecch---hhhccc---C--CCCeeEEEcccHHHHHHHHHHHHcCCcEEEEEeCCCcCC-CCCHHHHHHHHHHHH
Q 011787 196 IDEKRIVSST---GALALN---E--VPKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIVP-SMDGEIRKQFQRSLE 266 (477)
Q Consensus 196 ~~~~~~~~~~---~~~~~~---~--~~~~v~IiG~G~~g~e~a~~l~~~g~~Vtli~~~~~~~~-~~~~~~~~~~~~~l~ 266 (477)
...+++.. +...+. . .+++++|||+|++|+|+|..+++.|.+|+++++.+.+++ .+++++.+.+.+.++
T Consensus 125 --~~~v~~~~~~~~~~~l~~~~~~~~~~~vvIiG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~~l~~~l~ 202 (447)
T 1nhp_A 125 --LDNIYLMRGRQWAIKLKQKTVDPEVNNVVVIGSGYIGIEAAEAFAKAGKKVTVIDILDRPLGVYLDKEFTDVLTEEME 202 (447)
T ss_dssp --SBSEECCCHHHHHHHHHHHHTCTTCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSTTTTTCCHHHHHHHHHHHH
T ss_pred --CCCeEEECCHHHHHHHHHHhhhcCCCeEEEECCCHHHHHHHHHHHHCCCeEEEEecCcccccccCCHHHHHHHHHHHH
Confidence 33455543 332221 2 689999999999999999999999999999999999888 689999999999999
Q ss_pred hcCcEEEeCceEEEEEEcCCeE-EEEEeecCCCceEEEEcCEEEEeecCCCCCCCCCccccceeecCCCCeecCCCCCCC
Q 011787 267 KQKMKFMLKTKVVGVDLSGDGV-KLTLEPAAGGEKTILEADVVLVSAGRTPFTAGLGLDKIGVETDKMGRIPVNERFATN 345 (477)
Q Consensus 267 ~~gv~~~~~~~v~~i~~~~~~~-~v~~~~~~~~~~~~i~~D~vi~a~G~~p~~~~l~~~~~gl~~~~~g~i~vd~~l~t~ 345 (477)
+.||+++++++|++++.+ +++ .+.+ ++.++++|.|++|+|++|+... ++.. ++++++|+|.||+++||+
T Consensus 203 ~~gv~i~~~~~v~~i~~~-~~v~~v~~------~~~~i~~d~vi~a~G~~p~~~~--~~~~-~~~~~~G~i~Vd~~~~t~ 272 (447)
T 1nhp_A 203 ANNITIATGETVERYEGD-GRVQKVVT------DKNAYDADLVVVAVGVRPNTAW--LKGT-LELHPNGLIKTDEYMRTS 272 (447)
T ss_dssp TTTEEEEESCCEEEEECS-SBCCEEEE------SSCEEECSEEEECSCEEESCGG--GTTT-SCBCTTSCBCCCTTCBCS
T ss_pred hCCCEEEcCCEEEEEEcc-CcEEEEEE------CCCEEECCEEEECcCCCCChHH--HHhh-hhhcCCCcEEECccccCC
Confidence 999999999999999865 333 3443 2357999999999999999875 5566 777788999999999999
Q ss_pred CCCeEEecccCCC----------CCchhHHHHHHHHHHHHHcCCCCCC-CCCCCceEEEcCCCeeeecCCHHHHHHcCCC
Q 011787 346 IPGVYAIGDVIPG----------PMLAHKAEEDGVACVEFLAGKHGHV-DYDKVPGVVYTHPEVASVGKTEEQVKELGVE 414 (477)
Q Consensus 346 ~~~vya~GD~~~~----------~~~~~~A~~~g~~aa~~i~~~~~~~-~~~~~p~~~~~~~~~~~~G~~~~~~~~~~~~ 414 (477)
.|+|||+|||+.. +.+++.|..||++||+||++...++ .+...|++.|++|+++++|+++++++..|++
T Consensus 273 ~~~Iya~GD~~~~~~~~~g~~~~~~~~~~A~~qg~~aa~~i~g~~~~~~~~~~~~~~~~~~~~~~~vG~~~~~a~~~g~~ 352 (447)
T 1nhp_A 273 EPDVFAVGDATLIKYNPADTEVNIALATNARKQGRFAVKNLEEPVKPFPGVQGSSGLAVFDYKFASTGINEVMAQKLGKE 352 (447)
T ss_dssp STTEEECGGGSCEEEGGGTEEECCCCHHHHHHHHHHHHHTSSSCCCCCCCBCCCEEEEETTEEEEEEECCHHHHHHHTCC
T ss_pred CCCEEEeeeEEEeeccCCCCceechhHHHHHHHHHHHHHhhcCCCCCCCCccccEEEEECCeeeEEecCCHHHHHHcCCc
Confidence 9999999999962 3689999999999999999865332 3456788999999999999999999999999
Q ss_pred EEEEEEecCccccchhc-CCCceEEEEEEECCCCeEEEEEEEcCC-hHHHHHHHHHHhcCC
Q 011787 415 YRVGKFPFLANSRAKAI-DDAEGIVKILAEKETDKILGVHIMAPN-AGELIHEAAMATHDK 473 (477)
Q Consensus 415 ~~~~~~~~~~~~~~~~~-~~~~~~~k~~~~~~~~~i~G~~~~g~~-~~~~~~~~~~~~~~~ 473 (477)
+.+.. +....++... +++.+|+|+++++++++|+|+|++|+. +.|+|+.+++||.++
T Consensus 353 ~~~~~--~~~~~~~~~~~~~~~~~~k~~~~~~~~~ilG~~~~g~~~a~e~i~~~~~ai~~~ 411 (447)
T 1nhp_A 353 TKAVT--VVEDYLMDFNPDKQKAWFKLVYDPETTQILGAQLMSKADLTANINAISLAIQAK 411 (447)
T ss_dssp CEEEE--EEEESSCTTCTTCCEEEEEEEECTTTCBEEEEEEEESSCCTTHHHHHHHHHHTT
T ss_pred eEEEE--EEcCCccccCCCCceEEEEEEEECCCCEEEEEEEEcCccHHHHHHHHHHHHHcC
Confidence 88775 3455566655 466799999999889999999999999 999999999999754
No 42
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=100.00 E-value=2.8e-48 Score=381.80 Aligned_cols=360 Identities=19% Similarity=0.267 Sum_probs=273.5
Q ss_pred CCCCcEEEECCChHHHHHHHHHHHCC--CeEEEEecCCCCCceeeccCccCchhhhhhhHHHHHHHhhhhhCCccccccc
Q 011787 41 SDENDVVVIGGGPGGYVAAIKAAQLG--LKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSVE 118 (477)
Q Consensus 41 ~~~~dvvIIGgG~AGl~aA~~l~~~g--~~V~lie~~~~~GG~~~~~~~~p~~~l~~~~~~~~~~~~~~~~~g~~~~~~~ 118 (477)
+.++||+|||||+||++||..|++.| .+|+|+|++. +|.|++.+++... . .+.
T Consensus 2 ~~~~dvvIIG~G~aGl~aA~~l~~~g~~~~V~lie~~~---------g~~~~~~~l~~~~---------~-~~~------ 56 (384)
T 2v3a_A 2 SERAPLVIIGTGLAGYNLAREWRKLDGETPLLMITADD---------GRSYSKPMLSTGF---------S-KNK------ 56 (384)
T ss_dssp --CCCEEEECCSHHHHHHHHHHHTTCSSSCEEEECSSC---------CCEECGGGGGGTT---------T-TTC------
T ss_pred CCCCcEEEECChHHHHHHHHHHHhhCCCCCEEEEECCC---------CCccCcccccHHH---------h-CCC------
Confidence 34589999999999999999999998 5699999853 3444443322110 0 000
Q ss_pred cChHHHHHHHHHHHHHHH-HHHHHHhhhCCeEEEEe-EEEEecCCEEEEEecCCceEEEEecEEEEccCCCCCCCCCCcc
Q 011787 119 VDLPAMMAQKDKAVSNLT-RGIEGLFKKNKVTYVKG-YGKFISPSEVSVDTIEGGNTVVKGKNIIIATGSDVKSLPGITI 196 (477)
Q Consensus 119 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~v~~~~~-~~~~~~~~~~~v~~~~g~~~~i~~d~lvlAtG~~~~~~~g~~~ 196 (477)
... .+. .....++++.+++++.+ .+..++.....|.+.+ ..+.||+||+|||++|..+|..+.
T Consensus 57 -~~~-----------~~~~~~~~~~~~~~~v~~~~~~~v~~i~~~~~~v~~~~---~~~~~d~lviAtG~~p~~p~i~g~ 121 (384)
T 2v3a_A 57 -DAD-----------GLAMAEPGAMAEQLNARILTHTRVTGIDPGHQRIWIGE---EEVRYRDLVLAWGAEPIRVPVEGD 121 (384)
T ss_dssp -CHH-----------HHEEECHHHHHHHTTCEEECSCCCCEEEGGGTEEEETT---EEEECSEEEECCCEEECCCCCBST
T ss_pred -CHH-----------HhhccCHHHHHHhCCcEEEeCCEEEEEECCCCEEEECC---cEEECCEEEEeCCCCcCCCCCCCc
Confidence 000 011 11234455678998865 4666665444455443 469999999999999865432222
Q ss_pred CCceEecchhhhccc------CCCCeeEEEcccHHHHHHHHHHHHcCCcEEEEEeCCCcCCC-CCHHHHHHHHHHHHhcC
Q 011787 197 DEKRIVSSTGALALN------EVPKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIVPS-MDGEIRKQFQRSLEKQK 269 (477)
Q Consensus 197 ~~~~~~~~~~~~~~~------~~~~~v~IiG~G~~g~e~a~~l~~~g~~Vtli~~~~~~~~~-~~~~~~~~~~~~l~~~g 269 (477)
+...+++.++...+. ..+++++|||+|++|+|+|..|++.|.+|+++++.+.+++. +++++.+.+.+.+++.|
T Consensus 122 ~~~~v~~~~~~~~~~~~~~~~~~~~~v~ViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~~~~~~~~~~~~~l~~~l~~~g 201 (384)
T 2v3a_A 122 AQDALYPINDLEDYARFRQAAAGKRRVLLLGAGLIGCEFANDLSSGGYQLDVVAPCEQVMPGLLHPAAAKAVQAGLEGLG 201 (384)
T ss_dssp TTTCEEECSSHHHHHHHHHHHTTCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSSTTTSCHHHHHHHHHHHHTTT
T ss_pred CcCCEEEECCHHHHHHHHHhhccCCeEEEECCCHHHHHHHHHHHhCCCeEEEEecCcchhhcccCHHHHHHHHHHHHHcC
Confidence 234566665544322 34899999999999999999999999999999999988876 58899999999999999
Q ss_pred cEEEeCceEEEEEEcCCeEEEEEeecCCCceEEEEcCEEEEeecCCCCCCCCCccccceeecCCCCeecCCCCCCCCCCe
Q 011787 270 MKFMLKTKVVGVDLSGDGVKLTLEPAAGGEKTILEADVVLVSAGRTPFTAGLGLDKIGVETDKMGRIPVNERFATNIPGV 349 (477)
Q Consensus 270 v~~~~~~~v~~i~~~~~~~~v~~~~~~~~~~~~i~~D~vi~a~G~~p~~~~l~~~~~gl~~~~~g~i~vd~~l~t~~~~v 349 (477)
++++++++|++++.+++++.+++. +++++++|.|++|+|++|+.++ ++.+|++.+ +| |.||+++||+.|+|
T Consensus 202 v~i~~~~~v~~i~~~~~~~~v~~~-----~g~~i~~d~vv~a~G~~p~~~l--~~~~g~~~~-~g-i~vd~~~~t~~~~I 272 (384)
T 2v3a_A 202 VRFHLGPVLASLKKAGEGLEAHLS-----DGEVIPCDLVVSAVGLRPRTEL--AFAAGLAVN-RG-IVVDRSLRTSHANI 272 (384)
T ss_dssp CEEEESCCEEEEEEETTEEEEEET-----TSCEEEESEEEECSCEEECCHH--HHHTTCCBS-SS-EEECTTCBCSSTTE
T ss_pred CEEEeCCEEEEEEecCCEEEEEEC-----CCCEEECCEEEECcCCCcCHHH--HHHCCCCCC-CC-EEECCCCCCCCCCE
Confidence 999999999999887777777664 4578999999999999999874 678889887 46 99999999999999
Q ss_pred EEecccCC--CC--CchhHHHHHHHHHHHHHcCCCCCCCCCCCceEEEcC-CCeeeecCCHHHHHHcCCCEEEEEEecCc
Q 011787 350 YAIGDVIP--GP--MLAHKAEEDGVACVEFLAGKHGHVDYDKVPGVVYTH-PEVASVGKTEEQVKELGVEYRVGKFPFLA 424 (477)
Q Consensus 350 ya~GD~~~--~~--~~~~~A~~~g~~aa~~i~~~~~~~~~~~~p~~~~~~-~~~~~~G~~~~~~~~~~~~~~~~~~~~~~ 424 (477)
||+|||+. .+ .+++.|..||+++|+||++...++++..+|+++|+. +++..+|.++..
T Consensus 273 yA~GD~~~~~~~~~~~~~~a~~~g~~~a~~i~g~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~----------------- 335 (384)
T 2v3a_A 273 YALGDCAEVDGLNLLYVMPLMACARALAQTLAGNPSQVAYGPMPVTVKTPACPLVVSPPPRGM----------------- 335 (384)
T ss_dssp EECGGGEEETTBCCCSHHHHHHHHHHHHHHHTTCCCCCCCCCCCEEECCTTSCEEEECCCTTC-----------------
T ss_pred EEeeeeeeECCCCcchHHHHHHHHHHHHHHhcCCCccCCCCCcceEEEECCeeEEEecCCCCC-----------------
Confidence 99999984 22 357789999999999999887778888999999886 478888876531
Q ss_pred cccchhcCCCceEEEEEEECCCCeEEEEEEEcCChHHHHHHHH
Q 011787 425 NSRAKAIDDAEGIVKILAEKETDKILGVHIMAPNAGELIHEAA 467 (477)
Q Consensus 425 ~~~~~~~~~~~~~~k~~~~~~~~~i~G~~~~g~~~~~~~~~~~ 467 (477)
..++....++.+|.|++++ ++++|+|++++|++|.|+++.+.
T Consensus 336 ~~~~~~~~~~~g~~~~~~~-~~~~i~G~~~~g~~a~e~~~~~~ 377 (384)
T 2v3a_A 336 DGQWLVEGSGTDLKVLCRD-TAGRVIGYALTGAAVNEKLALNK 377 (384)
T ss_dssp CCEEEEEEETTEEEEEEEC-TTSCEEEEEEEGGGGGGHHHHHT
T ss_pred CceEEEEecCCcEEEEEEc-cCCEEEEEEEECcchHHHHHHHH
Confidence 1122223345689999887 67999999999999999998764
No 43
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=100.00 E-value=9.7e-47 Score=367.44 Aligned_cols=334 Identities=23% Similarity=0.325 Sum_probs=250.3
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCeEEEEecCCCCCceeeccCccCchhhhhhhHHHHHHHhhhhhCCccccccccChH
Q 011787 43 ENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSVEVDLP 122 (477)
Q Consensus 43 ~~dvvIIGgG~AGl~aA~~l~~~g~~V~lie~~~~~GG~~~~~~~~p~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 122 (477)
..|++|||||+||++||..|++.| +|+|||+++..+- ++.++.. . +. ..+........
T Consensus 8 ~~~vvIIGgG~AGl~aA~~l~~~g-~V~lie~~~~~~~---------~~~~l~~------~---~~-g~~~~~~~~~~-- 65 (367)
T 1xhc_A 8 GSKVVIVGNGPGGFELAKQLSQTY-EVTVIDKEPVPYY---------SKPMLSH------Y---IA-GFIPRNRLFPY-- 65 (367)
T ss_dssp -CEEEEECCSHHHHHHHHHHTTTS-EEEEECSSSSCCC---------CSTTHHH------H---HT-TSSCGGGGCSS--
T ss_pred CCcEEEECCcHHHHHHHHHHhhcC-CEEEEECCCCCcc---------ccchhHH------H---Hh-CCCCHHHhccC--
Confidence 369999999999999999999999 9999999654321 1111110 0 00 00111111111
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhCCeEEEEe-EEEEecCCEEEEEecCCceEEEEecEEEEccCCCCCCCCCCccCCceE
Q 011787 123 AMMAQKDKAVSNLTRGIEGLFKKNKVTYVKG-YGKFISPSEVSVDTIEGGNTVVKGKNIIIATGSDVKSLPGITIDEKRI 201 (477)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-~~~~~~~~~~~v~~~~g~~~~i~~d~lvlAtG~~~~~~~g~~~~~~~~ 201 (477)
...++++.+++++.+ .+..++...+.|. .++ .++.||+||||||++|..++..+ ...+
T Consensus 66 ----------------~~~~~~~~~v~~~~g~~v~~id~~~~~V~-~~g--~~~~~d~lViATGs~p~~p~i~G--~~~v 124 (367)
T 1xhc_A 66 ----------------SLDWYRKRGIEIRLAEEAKLIDRGRKVVI-TEK--GEVPYDTLVLATGARAREPQIKG--KEYL 124 (367)
T ss_dssp ----------------CHHHHHHHTEEEECSCCEEEEETTTTEEE-ESS--CEEECSEEEECCCEEECCCCSBT--GGGE
T ss_pred ----------------CHHHHHhCCcEEEECCEEEEEECCCCEEE-ECC--cEEECCEEEECCCCCCCCCCCCC--cCCE
Confidence 123345568999988 4788887776676 555 67999999999999886443222 2234
Q ss_pred ec---chhhhcccC---CCCeeEEEcccHHHHHHHHHHHHcCCcEEEEEeCCCcCCCCCHHHHHHHHHHHHhcCcEEEeC
Q 011787 202 VS---STGALALNE---VPKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIVPSMDGEIRKQFQRSLEKQKMKFMLK 275 (477)
Q Consensus 202 ~~---~~~~~~~~~---~~~~v~IiG~G~~g~e~a~~l~~~g~~Vtli~~~~~~~~~~~~~~~~~~~~~l~~~gv~~~~~ 275 (477)
++ .+++..+.. .+++++|||+|++|+|+|..|++.|.+|+++++.+++++ +++++.+.+.+.+++.||+++++
T Consensus 125 ~~~~~~~~~~~l~~~~~~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~-~~~~~~~~l~~~l~~~gV~i~~~ 203 (367)
T 1xhc_A 125 LTLRTIFDADRIKESIENSGEAIIIGGGFIGLELAGNLAEAGYHVKLIHRGAMFLG-LDEELSNMIKDMLEETGVKFFLN 203 (367)
T ss_dssp ECCCSHHHHHHHHHHHHHHSEEEEEECSHHHHHHHHHHHHTTCEEEEECSSSCCTT-CCHHHHHHHHHHHHHTTEEEECS
T ss_pred EEEcCHHHHHHHHHHhhcCCcEEEECCCHHHHHHHHHHHhCCCEEEEEeCCCeecc-CCHHHHHHHHHHHHHCCCEEEcC
Confidence 43 344443322 258999999999999999999999999999999999998 99999999999999999999999
Q ss_pred ceEEEEEEcCCeEEEEEeecCCCceEEEEcCEEEEeecCCCCCCCCCccccceeecCCCCeecCCCCCCCCCCeEEeccc
Q 011787 276 TKVVGVDLSGDGVKLTLEPAAGGEKTILEADVVLVSAGRTPFTAGLGLDKIGVETDKMGRIPVNERFATNIPGVYAIGDV 355 (477)
Q Consensus 276 ~~v~~i~~~~~~~~v~~~~~~~~~~~~i~~D~vi~a~G~~p~~~~l~~~~~gl~~~~~g~i~vd~~l~t~~~~vya~GD~ 355 (477)
+++++++ .+. +++. +++ +++|.|++|+|++||+++ +++.|++.+ + +|.||+++||+.|+|||+|||
T Consensus 204 ~~v~~i~--~~~--v~~~-----~g~-i~~D~vi~a~G~~p~~~l--l~~~gl~~~-~-gi~Vd~~~~t~~~~IyA~GD~ 269 (367)
T 1xhc_A 204 SELLEAN--EEG--VLTN-----SGF-IEGKVKICAIGIVPNVDL--ARRSGIHTG-R-GILIDDNFRTSAKDVYAIGDC 269 (367)
T ss_dssp CCEEEEC--SSE--EEET-----TEE-EECSCEEEECCEEECCHH--HHHTTCCBS-S-SEECCTTSBCSSTTEEECGGG
T ss_pred CEEEEEE--eeE--EEEC-----CCE-EEcCEEEECcCCCcCHHH--HHhCCCCCC-C-CEEECCCcccCCCCEEEeEee
Confidence 9999996 233 4443 456 999999999999999974 678888876 3 499999999999999999999
Q ss_pred CCC----CCchhHHHHHHHHHHHHHcCCCCCCCCCCCce--EEEcCCCeeeecCCHHHHHHcCCCEEEEEEecCccccch
Q 011787 356 IPG----PMLAHKAEEDGVACVEFLAGKHGHVDYDKVPG--VVYTHPEVASVGKTEEQVKELGVEYRVGKFPFLANSRAK 429 (477)
Q Consensus 356 ~~~----~~~~~~A~~~g~~aa~~i~~~~~~~~~~~~p~--~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~ 429 (477)
+.. +.+++.|..||+.||+||++...++++ ..|+ +.|++|+++++|++++++. + +
T Consensus 270 a~~~~~~~~~~~~A~~qg~~aa~~i~g~~~~~~~-~~~~~~~~~~~~~~~~vG~~~~~~~----~-------~------- 330 (367)
T 1xhc_A 270 AEYSGIIAGTAKAAMEQARVLADILKGEPRRYNF-KFRSTVFKFGKLQIAIIGNTKGEGK----W-------I------- 330 (367)
T ss_dssp EEBTTBCCCSHHHHHHHHHHHHHHHTTCCCCCCS-SCCEEEEEETTEEEEEEECCSSCEE----E-------E-------
T ss_pred eecCCCCccHHHHHHHHHHHHHHHhcCCCccCCC-CCCceEEEECCceEEEECCCCCCCc----c-------c-------
Confidence 842 468999999999999999987654444 2343 4799999999999988521 0 0
Q ss_pred hcCCCceEEEEEEECCCCeEEEEEEEcCChH
Q 011787 430 AIDDAEGIVKILAEKETDKILGVHIMAPNAG 460 (477)
Q Consensus 430 ~~~~~~~~~k~~~~~~~~~i~G~~~~g~~~~ 460 (477)
.+|+|++++ +++|+|++++|+.+.
T Consensus 331 -----~~~~k~~~~--~~~ilG~~~~g~~~~ 354 (367)
T 1xhc_A 331 -----EDNTKVFYE--NGKIIGAVVFNDIRK 354 (367)
T ss_dssp -----ETTEEEEC-------CEEEEESCHHH
T ss_pred -----ceEEEEEEE--CCEEEEEEEECChHH
Confidence 478999997 489999999998765
No 44
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=100.00 E-value=7.6e-45 Score=355.68 Aligned_cols=345 Identities=19% Similarity=0.297 Sum_probs=261.9
Q ss_pred CCCCCcEEEECCChHHHHHHHHHHHCCCeEEEEecCCCCCceeeccCccCchhhhhhhHHHHHHHhhhhhCCcccccccc
Q 011787 40 ASDENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSVEV 119 (477)
Q Consensus 40 ~~~~~dvvIIGgG~AGl~aA~~l~~~g~~V~lie~~~~~GG~~~~~~~~p~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~ 119 (477)
..++.+|+|||||+||++||..|.+.+.+|+|||+++.++.. . | .....+. ..........
T Consensus 6 ~~~~~~~vIvGgG~AGl~aA~~L~~~~~~itlie~~~~~~y~----~--~--------~l~~~l~-----g~~~~~~l~~ 66 (385)
T 3klj_A 6 HHKSTKILILGAGPAGFSAAKAALGKCDDITMINSEKYLPYY----R--P--------RLNEIIA-----KNKSIDDILI 66 (385)
T ss_dssp --CBCSEEEECCSHHHHHHHHHHTTTCSCEEEECSSSSCCBC----G--G--------GHHHHHH-----SCCCGGGTBS
T ss_pred ccCCCCEEEEcCcHHHHHHHHHHhCCCCEEEEEECCCCCCcc----c--C--------hhhHHHc-----CCCCHHHccC
Confidence 345689999999999999999997778999999997665421 0 0 0000000 0011111111
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHHhhhCCeEEEEe-EEEEecCCEEEEEecCCceEEEEecEEEEccCCCCCCC--CCCcc
Q 011787 120 DLPAMMAQKDKAVSNLTRGIEGLFKKNKVTYVKG-YGKFISPSEVSVDTIEGGNTVVKGKNIIIATGSDVKSL--PGITI 196 (477)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-~~~~~~~~~~~v~~~~g~~~~i~~d~lvlAtG~~~~~~--~g~~~ 196 (477)
...+++++.+++++.+ ++..+|.....|.+.+| .++.||+||||||++|+.+ ||.+
T Consensus 67 ------------------~~~~~~~~~~i~~~~~~~V~~id~~~~~v~~~~g--~~~~yd~lvlAtG~~p~~p~i~G~~- 125 (385)
T 3klj_A 67 ------------------KKNDWYEKNNIKVITSEFATSIDPNNKLVTLKSG--EKIKYEKLIIASGSIANKIKVPHAD- 125 (385)
T ss_dssp ------------------SCHHHHHHTTCEEECSCCEEEEETTTTEEEETTS--CEEECSEEEECCCEEECCCCCTTCS-
T ss_pred ------------------CCHHHHHHCCCEEEeCCEEEEEECCCCEEEECCC--CEEECCEEEEecCCCcCCCCCCCCC-
Confidence 1234556779999887 68888887778888888 6899999999999988644 4433
Q ss_pred CCceEec---chhhhcccC---CCCeeEEEcccHHHHHHHHHHHHcCCcEEEEEeCCCcCCC-CCHHHHHHHHHHHHhcC
Q 011787 197 DEKRIVS---STGALALNE---VPKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIVPS-MDGEIRKQFQRSLEKQK 269 (477)
Q Consensus 197 ~~~~~~~---~~~~~~~~~---~~~~v~IiG~G~~g~e~a~~l~~~g~~Vtli~~~~~~~~~-~~~~~~~~~~~~l~~~g 269 (477)
.+++ .++...+.. .+++++|||+|++|+|+|..|++.|.+|+++++.+++++. +++++.+.+.+.+++.|
T Consensus 126 ---~v~~~~~~~d~~~l~~~l~~~~~vvVIGgG~~g~E~A~~l~~~g~~Vtvv~~~~~~l~~~~~~~~~~~~~~~l~~~g 202 (385)
T 3klj_A 126 ---EIFSLYSYDDALKIKDECKNKGKAFIIGGGILGIELAQAIIDSGTPASIGIILEYPLERQLDRDGGLFLKDKLDRLG 202 (385)
T ss_dssp ---CEECCSSHHHHHHHHHHHHHHSCEEEECCSHHHHHHHHHHHHHTCCEEEECSSSSSCTTTSCHHHHHHHHHHHHTTT
T ss_pred ---CeEEeCCHHHHHHHHHHhhcCCeEEEECCCHHHHHHHHHHHhCCCeEEEEEcCCccchhhcCHHHHHHHHHHHHhCC
Confidence 3443 445444433 2789999999999999999999999999999999999885 89999999999999999
Q ss_pred cEEEeCceEEEEEEcCCeEEEEEeecCCCceEEEEcCEEEEeecCCCCCCCCCccccceeecCCCCeecCCCCCCCCCCe
Q 011787 270 MKFMLKTKVVGVDLSGDGVKLTLEPAAGGEKTILEADVVLVSAGRTPFTAGLGLDKIGVETDKMGRIPVNERFATNIPGV 349 (477)
Q Consensus 270 v~~~~~~~v~~i~~~~~~~~v~~~~~~~~~~~~i~~D~vi~a~G~~p~~~~l~~~~~gl~~~~~g~i~vd~~l~t~~~~v 349 (477)
|++++++.+.++ ++++++|.||+|+|++|++++ ++.+|+..+ + +|.||++++|+.|+|
T Consensus 203 V~~~~~~~v~~i------------------g~~~~~D~vv~a~G~~p~~~~--~~~~gl~~~-~-gi~vd~~~~t~~~~I 260 (385)
T 3klj_A 203 IKIYTNSNFEEM------------------GDLIRSSCVITAVGVKPNLDF--IKDTEIASK-R-GILVNDHMETSIKDI 260 (385)
T ss_dssp CEEECSCCGGGC------------------HHHHHHSEEEECCCEEECCGG--GTTSCCCBS-S-SEEECTTCBCSSTTE
T ss_pred CEEEeCCEEEEc------------------CeEEecCeEEECcCcccChhh--hhhcCCCcC-C-CEEECCCcccCCCCE
Confidence 999999887665 246889999999999999986 677888876 3 499999999999999
Q ss_pred EEecccCC----CCCchhHHHHHHHHHHHHHcCCCCCCCCCC-CceEEE--cCCCeeeecCCHHHHHHcCCCEEEEEEec
Q 011787 350 YAIGDVIP----GPMLAHKAEEDGVACVEFLAGKHGHVDYDK-VPGVVY--THPEVASVGKTEEQVKELGVEYRVGKFPF 422 (477)
Q Consensus 350 ya~GD~~~----~~~~~~~A~~~g~~aa~~i~~~~~~~~~~~-~p~~~~--~~~~~~~~G~~~~~~~~~~~~~~~~~~~~ 422 (477)
||+|||+. .+.++..|..||+.||.||++.... |.. .|++.+ ++++++++|+++.+. .+. +.
T Consensus 261 yA~GD~a~~~~~~~~~~~~A~~qg~~aa~~i~g~~~~--~~~~~~~~~~~~~~~~~~~~G~~~~~~----~~~-~~---- 329 (385)
T 3klj_A 261 YACGDVAEFYGKNPGLINIANKQGEVAGLNACGEDAS--YSEIIPSPILKVSGISIISCGDIENNK----PSK-VF---- 329 (385)
T ss_dssp EECGGGEEETTBCCCCHHHHHHHHHHHHHHHTTCCCC--CCCCCCCCEEEETTEEEEEESCCTTCC----CSE-EE----
T ss_pred EEEEeeEecCCCcccHHHHHHHHHHHHHHHhcCCCcC--CCCCCCcEEEEeCCCcEEEEcCCCCCC----CeE-EE----
Confidence 99999996 4678999999999999999987653 433 355444 788999999998652 111 11
Q ss_pred CccccchhcCCCceEEEEEEECCCCeEEEEEEEcCChHHHHHHHHHHhc
Q 011787 423 LANSRAKAIDDAEGIVKILAEKETDKILGVHIMAPNAGELIHEAAMATH 471 (477)
Q Consensus 423 ~~~~~~~~~~~~~~~~k~~~~~~~~~i~G~~~~g~~~~~~~~~~~~~~~ 471 (477)
. ..++..|.|++++ +++|+|++++|+.+.+. .+..+|.
T Consensus 330 ------~-~~~~~~~~~~~~~--~~~l~g~~~~g~~~~~~--~~~~~i~ 367 (385)
T 3klj_A 330 ------R-STQEDKYIVCMLK--ENKIDAAAVIGDVSLGT--KLKKAID 367 (385)
T ss_dssp ------E-EECSSCEEEEEEE--TTEEEEEEEESCHHHHH--HHHHHHH
T ss_pred ------E-ECCCCeEEEEEEE--CCEEEEEEEECCcHHHH--HHHHHHH
Confidence 1 1234579999995 69999999999988765 3444444
No 45
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=100.00 E-value=1.1e-43 Score=351.16 Aligned_cols=352 Identities=20% Similarity=0.252 Sum_probs=262.0
Q ss_pred CCCcEEEECCChHHHHHHHHHHHCCC--eEEEEecCCCCCceeeccCccCchhhhhhhHHHHHHHhhhhhCCcccccccc
Q 011787 42 DENDVVVIGGGPGGYVAAIKAAQLGL--KTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSVEV 119 (477)
Q Consensus 42 ~~~dvvIIGgG~AGl~aA~~l~~~g~--~V~lie~~~~~GG~~~~~~~~p~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~ 119 (477)
.++||+|||||+||++||.+|++.|. +|+|||+++.++. ..+..++.++.. . . .....+
T Consensus 6 ~~~~vvIIG~G~aGl~aA~~l~~~g~~~~V~lie~~~~~~~----~~~~~~~~~~~~---------~-----~-~~~~~~ 66 (408)
T 2gqw_A 6 LKAPVVVLGAGLASVSFVAELRQAGYQGLITVVGDEAERPY----DRPPLSKDFMAH---------G-----D-AEKIRL 66 (408)
T ss_dssp CCSSEEEECCSHHHHHHHHHHHHHTCCSCEEEEESSCSCCB----CSGGGGTHHHHH---------C-----C-GGGSBC
T ss_pred CCCcEEEECChHHHHHHHHHHHccCCCCeEEEEECCCCCcc----cCCCCCHHHhCC---------C-----c-hhhhhH
Confidence 45899999999999999999999987 5999999765431 111111111000 0 0 000000
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHHhhhCCeEEEEeE-EEEecCCEEEEEecCCceEEEEecEEEEccCCCCCCC---CCCc
Q 011787 120 DLPAMMAQKDKAVSNLTRGIEGLFKKNKVTYVKGY-GKFISPSEVSVDTIEGGNTVVKGKNIIIATGSDVKSL---PGIT 195 (477)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~~~~~~~v~~~~g~~~~i~~d~lvlAtG~~~~~~---~g~~ 195 (477)
. .+++.+++++.++ +..++.....|.+.+| .++.||+||+|||++|..+ ||.+
T Consensus 67 --------------------~-~~~~~~v~~~~~~~v~~i~~~~~~v~~~~g--~~~~~d~lviAtG~~~~~~~i~~G~~ 123 (408)
T 2gqw_A 67 --------------------D-CKRAPEVEWLLGVTAQSFDPQAHTVALSDG--RTLPYGTLVLATGAAPRALPTLQGAT 123 (408)
T ss_dssp --------------------C-CTTSCSCEEEETCCEEEEETTTTEEEETTS--CEEECSEEEECCCEEECCCGGGTTCS
T ss_pred --------------------H-HHHHCCCEEEcCCEEEEEECCCCEEEECCC--CEEECCEEEECCCCCCCCCCccCCCC
Confidence 0 3456789999986 7888876667777777 6899999999999988544 4433
Q ss_pred cCCceE---ecchhhhcccC---CCCeeEEEcccHHHHHHHHHHHHcCCcEEEEEeCCCcCC-CCCHHHHHHHHHHHHhc
Q 011787 196 IDEKRI---VSSTGALALNE---VPKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIVP-SMDGEIRKQFQRSLEKQ 268 (477)
Q Consensus 196 ~~~~~~---~~~~~~~~~~~---~~~~v~IiG~G~~g~e~a~~l~~~g~~Vtli~~~~~~~~-~~~~~~~~~~~~~l~~~ 268 (477)
..+ .+.++...+.. .+++++|||+|.+|+|+|..|++.|.+|+++++.+.+++ .+++++.+.+.+.+++.
T Consensus 124 ---~~v~~~~~~~~~~~l~~~~~~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~~l~~~l~~~ 200 (408)
T 2gqw_A 124 ---MPVHTLRTLEDARRIQAGLRPQSRLLIVGGGVIGLELAATARTAGVHVSLVETQPRLMSRAAPATLADFVARYHAAQ 200 (408)
T ss_dssp ---SCEEECCSHHHHHHHHTTCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSSTTTSCHHHHHHHHHHHHHT
T ss_pred ---CcEEEECCHHHHHHHHHHhhcCCeEEEECCCHHHHHHHHHHHhCCCEEEEEEeCCcccccccCHHHHHHHHHHHHHc
Confidence 233 34555544432 479999999999999999999999999999999999988 58999999999999999
Q ss_pred CcEEEeCceEEEEEEcCCeEEEEEeecCCCceEEEEcCEEEEeecCCCCCCCCCccccceeecCCCCeecCCCCCCCCCC
Q 011787 269 KMKFMLKTKVVGVDLSGDGVKLTLEPAAGGEKTILEADVVLVSAGRTPFTAGLGLDKIGVETDKMGRIPVNERFATNIPG 348 (477)
Q Consensus 269 gv~~~~~~~v~~i~~~~~~~~v~~~~~~~~~~~~i~~D~vi~a~G~~p~~~~l~~~~~gl~~~~~g~i~vd~~l~t~~~~ 348 (477)
||++++++++++++ + + .+++. +++++++|.|++|+|++|++++ +++.|++.+ +| |.||+++||+.|+
T Consensus 201 GV~i~~~~~v~~i~-~-~--~v~~~-----~g~~i~~D~vi~a~G~~p~~~l--~~~~gl~~~-~g-i~Vd~~~~t~~~~ 267 (408)
T 2gqw_A 201 GVDLRFERSVTGSV-D-G--VVLLD-----DGTRIAADMVVVGIGVLANDAL--ARAAGLACD-DG-IFVDAYGRTTCPD 267 (408)
T ss_dssp TCEEEESCCEEEEE-T-T--EEEET-----TSCEEECSEEEECSCEEECCHH--HHHHTCCBS-SS-EECCTTCBCSSTT
T ss_pred CcEEEeCCEEEEEE-C-C--EEEEC-----CCCEEEcCEEEECcCCCccHHH--HHhCCCCCC-CC-EEECCCCccCCCC
Confidence 99999999999997 3 3 44443 4578999999999999999875 677888876 45 9999999999999
Q ss_pred eEEecccCCCC----------CchhHHHHHHHHHHHHHcCCCCCCCCCCCceEE--EcCCCeeeecCCHHHHHHcCCCEE
Q 011787 349 VYAIGDVIPGP----------MLAHKAEEDGVACVEFLAGKHGHVDYDKVPGVV--YTHPEVASVGKTEEQVKELGVEYR 416 (477)
Q Consensus 349 vya~GD~~~~~----------~~~~~A~~~g~~aa~~i~~~~~~~~~~~~p~~~--~~~~~~~~~G~~~~~~~~~~~~~~ 416 (477)
|||+|||+..+ .++..|..||+.||.||++... .+|..+|++. +++++++++|+ +.. .+..
T Consensus 268 IyA~GD~~~~~~~~~g~~~~~~~~~~A~~~g~~aa~~i~g~~~-~~~~~~p~~~~~~~~~~~~~~G~-~~~-----~~~~ 340 (408)
T 2gqw_A 268 VYALGDVTRQRNPLSGRFERIETWSNAQNQGIAVARHLVDPTA-PGYAELPWYWSDQGALRIQVAGL-ASG-----DEEI 340 (408)
T ss_dssp EEECGGGEEEEETTTTEEECCCCHHHHHHHHHHHHHHHHCTTS-CCCCCCCEEEEEETTEEEEEEEC-SCC-----SEEE
T ss_pred EEEEEEEEEecCccCCceeeccHHHHHHHHHHHHHHHhcCCCC-CcCCCCCeEEEEECCceEEEECC-CCC-----CEEE
Confidence 99999999653 2678999999999999998754 2567788764 34578999998 211 1111
Q ss_pred EEEEecCccccchhcCCCceEEEEEEECCCCeEEEEEEEcCChHHHHHHHHHHhc
Q 011787 417 VGKFPFLANSRAKAIDDAEGIVKILAEKETDKILGVHIMAPNAGELIHEAAMATH 471 (477)
Q Consensus 417 ~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~i~G~~~~g~~~~~~~~~~~~~~~ 471 (477)
+ .. .......+|.+++++ +++|+|++++|+.+. +..+..+|.
T Consensus 341 ~-----~~----~~~~~~~~~~~~~~~--~~~l~G~~~~g~~~~--~~~~~~~i~ 382 (408)
T 2gqw_A 341 V-----RG----EVSLDAPKFTLIELQ--KGRIVGATCVNNARD--FAPLRRLLA 382 (408)
T ss_dssp E-----ES----CCCSSSCCEEEEEEE--TTEEEEEEEESCHHH--HHHHHHHHH
T ss_pred E-----Ec----cCCCCCCeEEEEEEe--CCEEEEEEEECChHH--HHHHHHHHH
Confidence 0 00 000114568777774 799999999998764 455666665
No 46
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=100.00 E-value=2.6e-43 Score=350.85 Aligned_cols=363 Identities=20% Similarity=0.232 Sum_probs=267.1
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCC--eEEEEecCCCCCceeeccCccCchhhhhhhHHHHHHHhhhhhCCccccccccC
Q 011787 43 ENDVVVIGGGPGGYVAAIKAAQLGL--KTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSVEVD 120 (477)
Q Consensus 43 ~~dvvIIGgG~AGl~aA~~l~~~g~--~V~lie~~~~~GG~~~~~~~~p~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~~ 120 (477)
.+||+|||||+||++||..|++.|. +|+|||+++.+... .+..++.++. ...........
T Consensus 4 ~~~vvIIGgG~aGl~aA~~l~~~g~~~~V~lie~~~~~~~~----~~~l~~~~~~--------------~~~~~~~~~~~ 65 (431)
T 1q1r_A 4 NDNVVIVGTGLAGVEVAFGLRASGWEGNIRLVGDATVIPHH----LPPLSKAYLA--------------GKATAESLYLR 65 (431)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSCCSCCBC----SGGGGTTTTT--------------TCSCSGGGBSS
T ss_pred CCcEEEEcCHHHHHHHHHHHHccCcCCCEEEEECCCCCCCc----CCCCcHHHhC--------------CCCChHHhccc
Confidence 5899999999999999999999987 79999996543211 0000110000 00000000010
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhhhCCeEEEEeE-EEEecCCEEEEEecCCceEEEEecEEEEccCCCCCCC--CCCccC
Q 011787 121 LPAMMAQKDKAVSNLTRGIEGLFKKNKVTYVKGY-GKFISPSEVSVDTIEGGNTVVKGKNIIIATGSDVKSL--PGITID 197 (477)
Q Consensus 121 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~~~~~~~v~~~~g~~~~i~~d~lvlAtG~~~~~~--~g~~~~ 197 (477)
..+++++.+++++.+. +..++.....|.+.+| .++.||+||+|||++|..+ |+.+..
T Consensus 66 ------------------~~~~~~~~gv~~~~~~~v~~i~~~~~~v~~~~g--~~~~~d~lviAtG~~p~~~~i~G~~~~ 125 (431)
T 1q1r_A 66 ------------------TPDAYAAQNIQLLGGTQVTAINRDRQQVILSDG--RALDYDRLVLATGGRPRPLPVASGAVG 125 (431)
T ss_dssp ------------------CHHHHHHTTEEEECSCCEEEEETTTTEEEETTS--CEEECSEEEECCCEEECCCGGGTTHHH
T ss_pred ------------------CHHHHHhCCCEEEeCCEEEEEECCCCEEEECCC--CEEECCEEEEcCCCCccCCCCCCcccC
Confidence 1234456799998874 6777765556777777 6799999999999988544 343211
Q ss_pred C-ceE---ecchhhhccc---CCCCeeEEEcccHHHHHHHHHHHHcCCcEEEEEeCCCcCCC-CCHHHHHHHHHHHHhcC
Q 011787 198 E-KRI---VSSTGALALN---EVPKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIVPS-MDGEIRKQFQRSLEKQK 269 (477)
Q Consensus 198 ~-~~~---~~~~~~~~~~---~~~~~v~IiG~G~~g~e~a~~l~~~g~~Vtli~~~~~~~~~-~~~~~~~~~~~~l~~~g 269 (477)
. ..+ .+.+++..+. ..+++++|||+|++|+|+|..|++.|.+|+++++.+.+++. +++++.+.+.+.+++.|
T Consensus 126 ~~~~v~~~~~~~d~~~l~~~l~~~~~vvViGgG~~g~E~A~~l~~~G~~Vtlv~~~~~~l~~~~~~~~~~~l~~~l~~~G 205 (431)
T 1q1r_A 126 KANNFRYLRTLEDAECIRRQLIADNRLVVIGGGYIGLEVAATAIKANMHVTLLDTAARVLERVTAPPVSAFYEHLHREAG 205 (431)
T ss_dssp HSTTEEESSSHHHHHHHHHTCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSTTTTTSCHHHHHHHHHHHHHHT
T ss_pred CCceEEEECCHHHHHHHHHHhhcCCeEEEECCCHHHHHHHHHHHhCCCEEEEEEeCCccccchhhHHHHHHHHHHHHhCC
Confidence 1 003 3445554443 34899999999999999999999999999999999988874 89999999999999999
Q ss_pred cEEEeCceEEEEEE--cCCeE-EEEEeecCCCceEEEEcCEEEEeecCCCCCCCCCccccceeecCCCCeecCCCCCCCC
Q 011787 270 MKFMLKTKVVGVDL--SGDGV-KLTLEPAAGGEKTILEADVVLVSAGRTPFTAGLGLDKIGVETDKMGRIPVNERFATNI 346 (477)
Q Consensus 270 v~~~~~~~v~~i~~--~~~~~-~v~~~~~~~~~~~~i~~D~vi~a~G~~p~~~~l~~~~~gl~~~~~g~i~vd~~l~t~~ 346 (477)
|++++++++++++. +++++ .+.+. +++++++|.||+|+|++|++++ ++.+|++.+ + +|.||+++||+.
T Consensus 206 V~i~~~~~v~~i~~~~~~~~v~~v~~~-----~G~~i~~D~Vv~a~G~~p~~~l--~~~~gl~~~-~-gi~Vd~~~~ts~ 276 (431)
T 1q1r_A 206 VDIRTGTQVCGFEMSTDQQKVTAVLCE-----DGTRLPADLVIAGIGLIPNCEL--ASAAGLQVD-N-GIVINEHMQTSD 276 (431)
T ss_dssp CEEECSCCEEEEEECTTTCCEEEEEET-----TSCEEECSEEEECCCEEECCHH--HHHTTCCBS-S-SEECCTTSBCSS
T ss_pred eEEEeCCEEEEEEeccCCCcEEEEEeC-----CCCEEEcCEEEECCCCCcCcch--hhccCCCCC-C-CEEECCCcccCC
Confidence 99999999999987 44554 45554 4578999999999999999875 677888876 3 499999999999
Q ss_pred CCeEEecccCCCCC----------chhHHHHHHHHHHHHHcCCCCCCCCCCCceEE--EcCCCeeeecCCHHHHHHcCCC
Q 011787 347 PGVYAIGDVIPGPM----------LAHKAEEDGVACVEFLAGKHGHVDYDKVPGVV--YTHPEVASVGKTEEQVKELGVE 414 (477)
Q Consensus 347 ~~vya~GD~~~~~~----------~~~~A~~~g~~aa~~i~~~~~~~~~~~~p~~~--~~~~~~~~~G~~~~~~~~~~~~ 414 (477)
|+|||+|||+..+. .+..|..||+.||.||++... +|..+|++. +.+.++..+|+++.. .+
T Consensus 277 ~~IyA~GD~~~~~~~~~g~~~~~~~~~~A~~qg~~aa~~i~g~~~--~~~~~p~~~~~~~~~~~~~~G~~~~~-----~~ 349 (431)
T 1q1r_A 277 PLIMAVGDCARFHSQLYDRWVRIESVPNALEQARKIAAILCGKVP--RDEAAPWFWSDQYEIGLKMVGLSEGY-----DR 349 (431)
T ss_dssp TTEEECGGGEEEEETTTTEEEECCSHHHHHHHHHHHHHHHTTCCC--CCCCCCEEEEEETTEEEEEEECCTTC-----SE
T ss_pred CCEEEEEeEEEEccccCCceEeeCHHHHHHHHHHHHHHHhcCCCC--CCCCCCeEEEEECCceEEEEeCCCCC-----CE
Confidence 99999999996532 578899999999999998754 566788753 234678899987631 11
Q ss_pred EEEEEEecCccccchhcCCCceEEEEEEECCCCeEEEEEEEcCChHHHHHHHHHHhcC
Q 011787 415 YRVGKFPFLANSRAKAIDDAEGIVKILAEKETDKILGVHIMAPNAGELIHEAAMATHD 472 (477)
Q Consensus 415 ~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~i~G~~~~g~~~~~~~~~~~~~~~~ 472 (477)
+.. . ...+...|++++. ++++|+|++++|+.+.+.+...+++...
T Consensus 350 ~~~-~----------~~~~~~~~~~~~~--~~~~l~G~~~~g~~~~~~~~~~~i~~~~ 394 (431)
T 1q1r_A 350 IIV-R----------GSLAQPDFSVFYL--QGDRVLAVDTVNRPVEFNQSKQIITDRL 394 (431)
T ss_dssp EEE-E----------EETTTTEEEEEEE--ETTEEEEEEEESCHHHHHHHHHHHHTTC
T ss_pred EEE-E----------ccCCCCeEEEEEE--eCCEEEEEEEECChHHHHHHHHHHHCCC
Confidence 111 0 0123346766654 4799999999999999999888777653
No 47
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=100.00 E-value=2.5e-41 Score=335.74 Aligned_cols=349 Identities=21% Similarity=0.324 Sum_probs=263.4
Q ss_pred CCCcEEEECCChHHHHHHHHHHHCCCe--EEEEecCCCCCceeeccCccCchhhhhhhHHHHHHHhhhhhCCcccccccc
Q 011787 42 DENDVVVIGGGPGGYVAAIKAAQLGLK--TTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSVEV 119 (477)
Q Consensus 42 ~~~dvvIIGgG~AGl~aA~~l~~~g~~--V~lie~~~~~GG~~~~~~~~p~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~ 119 (477)
.++||+|||||+||++||.+|++.|.+ |+|||+++.++... .| + ... +............
T Consensus 8 ~~~~vvIIGaG~aGl~aA~~L~~~g~~~~V~lie~~~~~~y~~-----~~---l-~~~---------~~~~~~~~~~~~~ 69 (415)
T 3lxd_A 8 ERADVVIVGAGHGGAQAAIALRQNGFEGRVLVIGREPEIPYER-----PP---L-SKE---------YLAREKTFERICI 69 (415)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCSCEEEEESSSSCCBCS-----GG---G-GTT---------TTTTSSCSGGGBS
T ss_pred CCCcEEEECChHHHHHHHHHHHccCcCCCEEEEecCCCCCcCc-----cc---C-CHH---------HHcCCCCHHHhcc
Confidence 458999999999999999999999877 99999976543211 00 0 000 0000000111111
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHHhhhCCeEEEEe-EEEEecCCEEEEEecCCceEEEEecEEEEccCCCCCCC--CCCcc
Q 011787 120 DLPAMMAQKDKAVSNLTRGIEGLFKKNKVTYVKG-YGKFISPSEVSVDTIEGGNTVVKGKNIIIATGSDVKSL--PGITI 196 (477)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-~~~~~~~~~~~v~~~~g~~~~i~~d~lvlAtG~~~~~~--~g~~~ 196 (477)
. ...++.+.+++++.+ .+..++.....|.+.++ ..+.||+||||||++|..+ |+.+
T Consensus 70 ~------------------~~~~~~~~~i~~~~~~~v~~id~~~~~v~~~~g--~~~~~d~lvlAtG~~~~~~~i~g~~- 128 (415)
T 3lxd_A 70 R------------------PAQFWEDKAVEMKLGAEVVSLDPAAHTVKLGDG--SAIEYGKLIWATGGDPRRLSCVGAD- 128 (415)
T ss_dssp S------------------CHHHHHHTTEEEEETCCEEEEETTTTEEEETTS--CEEEEEEEEECCCEECCCCBTTSSC-
T ss_pred C------------------CHHHHHHCCcEEEeCCEEEEEECCCCEEEECCC--CEEEeeEEEEccCCccCCCCCCCcc-
Confidence 1 124456679999998 78888888778888777 6899999999999988644 4433
Q ss_pred CCceEe---cchhhhccc---CC-CCeeEEEcccHHHHHHHHHHHHcCCcEEEEEeCCCcCC-CCCHHHHHHHHHHHHhc
Q 011787 197 DEKRIV---SSTGALALN---EV-PKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIVP-SMDGEIRKQFQRSLEKQ 268 (477)
Q Consensus 197 ~~~~~~---~~~~~~~~~---~~-~~~v~IiG~G~~g~e~a~~l~~~g~~Vtli~~~~~~~~-~~~~~~~~~~~~~l~~~ 268 (477)
...++ +.+++..+. .. +++++|||+|++|+|+|..+++.|.+|+++++.+++++ .+++++.+.+.+.+++.
T Consensus 129 -~~~v~~~~~~~d~~~l~~~~~~~~~~vvViGgG~~g~e~A~~l~~~g~~Vtvv~~~~~~l~~~~~~~~~~~l~~~l~~~ 207 (415)
T 3lxd_A 129 -LAGVHAVRTKEDADRLMAELDAGAKNAVVIGGGYIGLEAAAVLTKFGVNVTLLEALPRVLARVAGEALSEFYQAEHRAH 207 (415)
T ss_dssp -CBTEECCCSHHHHHHHHHHHHTTCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSTTTTTSCHHHHHHHHHHHHHT
T ss_pred -ccCEEEEcCHHHHHHHHHHhhhcCCeEEEECCCHHHHHHHHHHHhcCCeEEEEecCCchhhhhcCHHHHHHHHHHHHhC
Confidence 23333 444444332 23 89999999999999999999999999999999999987 58999999999999999
Q ss_pred CcEEEeCceEEEEEEcCCeE-EEEEeecCCCceEEEEcCEEEEeecCCCCCCCCCccccceeecCCCCeecCCCCCCCCC
Q 011787 269 KMKFMLKTKVVGVDLSGDGV-KLTLEPAAGGEKTILEADVVLVSAGRTPFTAGLGLDKIGVETDKMGRIPVNERFATNIP 347 (477)
Q Consensus 269 gv~~~~~~~v~~i~~~~~~~-~v~~~~~~~~~~~~i~~D~vi~a~G~~p~~~~l~~~~~gl~~~~~g~i~vd~~l~t~~~ 347 (477)
||++++++.|++++.+++++ .+++. +++++++|.||+|+|++|++++ ++..|+..+ + +|.||++++|+.|
T Consensus 208 GV~i~~~~~v~~i~~~~~~v~~v~l~-----dG~~i~aD~Vv~a~G~~p~~~l--~~~~gl~~~-~-gi~vd~~~~t~~~ 278 (415)
T 3lxd_A 208 GVDLRTGAAMDCIEGDGTKVTGVRMQ-----DGSVIPADIVIVGIGIVPCVGA--LISAGASGG-N-GVDVDEFCRTSLT 278 (415)
T ss_dssp TCEEEETCCEEEEEESSSBEEEEEES-----SSCEEECSEEEECSCCEESCHH--HHHTTCCCS-S-SEECCTTCBCSST
T ss_pred CCEEEECCEEEEEEecCCcEEEEEeC-----CCCEEEcCEEEECCCCccChHH--HHhCCCCcC-C-CEEECCCCCcCCC
Confidence 99999999999998876665 46654 5678999999999999999975 677888877 3 4999999999999
Q ss_pred CeEEecccCCCCC-----------chhHHHHHHHHHHHHHcCCCCCCCCCCCceEE--EcCCCeeeecCCHHHHHHcCCC
Q 011787 348 GVYAIGDVIPGPM-----------LAHKAEEDGVACVEFLAGKHGHVDYDKVPGVV--YTHPEVASVGKTEEQVKELGVE 414 (477)
Q Consensus 348 ~vya~GD~~~~~~-----------~~~~A~~~g~~aa~~i~~~~~~~~~~~~p~~~--~~~~~~~~~G~~~~~~~~~~~~ 414 (477)
+|||+|||+..+. +++.|..||+.||+||++... +|..+|++. +++..+..+|+++.. -+
T Consensus 279 ~iyA~GD~a~~~~~~~~g~~~~~~~~~~A~~qg~~aa~~i~g~~~--~~~~~p~~~~~~~~~~~~~~G~~~~~-----~~ 351 (415)
T 3lxd_A 279 DVYAIGDCAAHANDFADGAVIRLESVQNANDMATAAAKDICGAPV--PYKATPWFWSNQYDLKLQTVGLSTGH-----DN 351 (415)
T ss_dssp TEEECGGGEEEECGGGTTCEECCCSHHHHHHHHHHHHHHHTTCCC--CCCCCCEEEEEETTEEEEEEECCTTC-----SE
T ss_pred CEEEEEeeeeecCcccCCcceeechHHHHHHHHHHHHHHhcCCCC--CCCCCCeeEeeeCCcEEEEEeCCCCC-----CE
Confidence 9999999996543 468999999999999998764 577777643 345678888887431 11
Q ss_pred EEEEEEecCccccchhcCCCceEEEEEEECCCCeEEEEEEEcCCh
Q 011787 415 YRVGKFPFLANSRAKAIDDAEGIVKILAEKETDKILGVHIMAPNA 459 (477)
Q Consensus 415 ~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~i~G~~~~g~~~ 459 (477)
+ +.. ...+...|.++++. +++|+|+..+|...
T Consensus 352 ~-~~~----------~~~~~~~~~~~~~~--~~~~~g~~~~~~~~ 383 (415)
T 3lxd_A 352 A-VLR----------GDPATRSFSVVYLK--GGKVVALDCVNMVK 383 (415)
T ss_dssp E-EEE----------EEGGGTEEEEEEEE--TTEEEEEEEESCHH
T ss_pred E-EEE----------ecCCCCeEEEEEEE--CCEEEEEEEECChH
Confidence 1 110 01223568888884 68999999999853
No 48
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=100.00 E-value=2.2e-42 Score=342.32 Aligned_cols=347 Identities=20% Similarity=0.309 Sum_probs=260.2
Q ss_pred CcEEEECCChHHHHHHHHHHHCCCe--EEEEecCCCCCceeeccCccCchhhhhhhHHHHHHHhhhhhCCccccccccCh
Q 011787 44 NDVVVIGGGPGGYVAAIKAAQLGLK--TTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSVEVDL 121 (477)
Q Consensus 44 ~dvvIIGgG~AGl~aA~~l~~~g~~--V~lie~~~~~GG~~~~~~~~p~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 121 (477)
+||+|||||+||++||..|++.|.+ |+|||+++.++.. .|. +... +.......... ..
T Consensus 3 ~~vvIIGaG~AGl~aA~~L~~~g~~~~V~li~~~~~~~y~------~~~---l~~~---------~~~g~~~~~~~-~~- 62 (410)
T 3ef6_A 3 THVAIIGNGVGGFTTAQALRAEGFEGRISLIGDEPHLPYD------RPS---LSKA---------VLDGSLERPPI-LA- 62 (410)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEEECSSSSSBC------SGG---GGTH---------HHHTSSSSCCB-SS-
T ss_pred CCEEEEcccHHHHHHHHHHHccCcCCeEEEEECCCCCCcC------Ccc---ccHH---------HhCCCCCHHHh-cC-
Confidence 5899999999999999999999876 9999997654321 000 0000 00001111111 11
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhCCeEEEEe-EEEEecCCEEEEEecCCceEEEEecEEEEccCCCCCCC--CCCccCC
Q 011787 122 PAMMAQKDKAVSNLTRGIEGLFKKNKVTYVKG-YGKFISPSEVSVDTIEGGNTVVKGKNIIIATGSDVKSL--PGITIDE 198 (477)
Q Consensus 122 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-~~~~~~~~~~~v~~~~g~~~~i~~d~lvlAtG~~~~~~--~g~~~~~ 198 (477)
...++.+.+++++.+ ++..++.....|.+.+| .++.||+||||||++|..+ |+.. .
T Consensus 63 -----------------~~~~~~~~~i~~~~~~~v~~id~~~~~v~~~~g--~~~~~d~lvlAtG~~p~~~~ipG~~--~ 121 (410)
T 3ef6_A 63 -----------------EADWYGEARIDMLTGPEVTALDVQTRTISLDDG--TTLSADAIVIATGSRARTMALPGSQ--L 121 (410)
T ss_dssp -----------------CTTHHHHTTCEEEESCCEEEEETTTTEEEETTS--CEEECSEEEECCCEEECCCCCTTTT--S
T ss_pred -----------------CHHHHHHCCCEEEeCCEEEEEECCCCEEEECCC--CEEECCEEEEccCCcccCCCCCCcc--c
Confidence 113455679999999 78888888778888787 6899999999999998644 5543 2
Q ss_pred ceEe---cchhhhccc---CCCCeeEEEcccHHHHHHHHHHHHcCCcEEEEEeCCCcCC-CCCHHHHHHHHHHHHhcCcE
Q 011787 199 KRIV---SSTGALALN---EVPKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIVP-SMDGEIRKQFQRSLEKQKMK 271 (477)
Q Consensus 199 ~~~~---~~~~~~~~~---~~~~~v~IiG~G~~g~e~a~~l~~~g~~Vtli~~~~~~~~-~~~~~~~~~~~~~l~~~gv~ 271 (477)
..++ +.++...+. ..+++++|||+|++|+|+|..+++.|.+|+++++.+++++ .+++++.+.+.+.++++||+
T Consensus 122 ~~v~~~~~~~d~~~l~~~~~~~~~vvViGgG~~g~E~A~~l~~~g~~Vtvv~~~~~~l~~~~~~~~~~~l~~~l~~~GV~ 201 (410)
T 3ef6_A 122 PGVVTLRTYGDVQVLRDSWTSATRLLIVGGGLIGCEVATTARKLGLSVTILEAGDELLVRVLGRRIGAWLRGLLTELGVQ 201 (410)
T ss_dssp TTEECCCSHHHHHHHHHHCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSHHHHCHHHHHHHHHHHHHHTCE
T ss_pred cceEEeccHHHHHHHHHHhccCCeEEEECCCHHHHHHHHHHHhCCCeEEEEecCCccchhhcCHHHHHHHHHHHHHCCCE
Confidence 3333 444444332 3489999999999999999999999999999999998876 47899999999999999999
Q ss_pred EEeCceEEEEEEcCCeEEEEEeecCCCceEEEEcCEEEEeecCCCCCCCCCccccceeecCCCCeecCCCCCCCCCCeEE
Q 011787 272 FMLKTKVVGVDLSGDGVKLTLEPAAGGEKTILEADVVLVSAGRTPFTAGLGLDKIGVETDKMGRIPVNERFATNIPGVYA 351 (477)
Q Consensus 272 ~~~~~~v~~i~~~~~~~~v~~~~~~~~~~~~i~~D~vi~a~G~~p~~~~l~~~~~gl~~~~~g~i~vd~~l~t~~~~vya 351 (477)
+++++.|++++.++....+++. +++++++|.||+|+|++|+.++ ++.+|+..+ ++|.||++++|+.|+|||
T Consensus 202 i~~~~~v~~i~~~~~~~~v~~~-----dg~~i~aD~Vv~a~G~~p~~~l--~~~~gl~~~--~gi~vd~~~~t~~~~IyA 272 (410)
T 3ef6_A 202 VELGTGVVGFSGEGQLEQVMAS-----DGRSFVADSALICVGAEPADQL--ARQAGLACD--RGVIVDHCGATLAKGVFA 272 (410)
T ss_dssp EECSCCEEEEECSSSCCEEEET-----TSCEEECSEEEECSCEEECCHH--HHHTTCCBS--SSEECCTTSBCSSTTEEE
T ss_pred EEeCCEEEEEeccCcEEEEEEC-----CCCEEEcCEEEEeeCCeecHHH--HHhCCCccC--CeEEEccCeeECCCCEEE
Confidence 9999999999876544456664 5678999999999999999875 678888887 359999999999999999
Q ss_pred ecccCCCCC---------chhHHHHHHHHHHHHHcCCCCCCCCCCCceEE--EcCCCeeeecCCHHHHHHcCCCEEEEEE
Q 011787 352 IGDVIPGPM---------LAHKAEEDGVACVEFLAGKHGHVDYDKVPGVV--YTHPEVASVGKTEEQVKELGVEYRVGKF 420 (477)
Q Consensus 352 ~GD~~~~~~---------~~~~A~~~g~~aa~~i~~~~~~~~~~~~p~~~--~~~~~~~~~G~~~~~~~~~~~~~~~~~~ 420 (477)
+|||+..+. +++.|..||+.||+||++... +|..+|++. +++..+..+|+++.. + +...
T Consensus 273 ~GD~a~~~~~~g~~~~~~~~~~A~~qg~~aa~~i~g~~~--~~~~~p~~~~~~~~~~~~~~G~~~~~------~-~~~~- 342 (410)
T 3ef6_A 273 VGDVASWPLRAGGRRSLETYMNAQRQAAAVAAAILGKNV--SAPQLPVSWTEIAGHRMQMAGDIEGP------G-DFVS- 342 (410)
T ss_dssp CGGGEEEEBTTSSEECCCCHHHHHHHHHHHHHHHTTCCC--CCCBCCEEEEEETTEEEEEESCSSSS------S-EEEE-
T ss_pred EEcceeccCCCCCeeeechHHHHHHHHHHHHHHHcCCCC--CCCCCCeeEEEECCceEEEEcCCCCC------C-EEEE-
Confidence 999996543 489999999999999998753 567777643 345577888876532 1 0100
Q ss_pred ecCccccchhcCCCceEEEEEEECCCCeEEEEEEEcCChH
Q 011787 421 PFLANSRAKAIDDAEGIVKILAEKETDKILGVHIMAPNAG 460 (477)
Q Consensus 421 ~~~~~~~~~~~~~~~~~~k~~~~~~~~~i~G~~~~g~~~~ 460 (477)
....+...|.++++. +++|+|+.++|....
T Consensus 343 --------~~~~~~~~~~~~~~~--~~~l~g~~~~~~~~~ 372 (410)
T 3ef6_A 343 --------RGMPGSGAALLFRLQ--ERRIQAVVAVDAPRD 372 (410)
T ss_dssp --------ESCTTSSSEEEEEEE--TTEEEEEEEESCHHH
T ss_pred --------EeeCCCCeEEEEEEE--CCEEEEEEEECChHH
Confidence 001123457777774 789999999998543
No 49
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=100.00 E-value=5.6e-41 Score=331.93 Aligned_cols=349 Identities=22% Similarity=0.299 Sum_probs=260.4
Q ss_pred CcEEEECCChHHHHHHHHHHHCCC--eEEEEecCCCCCceeeccCccCchhhhhhhHHHHHHHhhhhhCCccccccccCh
Q 011787 44 NDVVVIGGGPGGYVAAIKAAQLGL--KTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSVEVDL 121 (477)
Q Consensus 44 ~dvvIIGgG~AGl~aA~~l~~~g~--~V~lie~~~~~GG~~~~~~~~p~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 121 (477)
+||+|||||+||++||.+|++.|+ +|+|||+++..+... .| + ... +.............
T Consensus 2 k~vvIIGaG~aGl~aA~~L~~~g~~~~V~lie~~~~~~y~~-----~~---l-~~~---------~l~~~~~~~~~~~~- 62 (404)
T 3fg2_P 2 DTVLIAGAGHAGFQVAVSLRQAKYPGRIALINDEKHLPYQR-----PP---L-SKA---------YLKSGGDPNSLMFR- 62 (404)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCSCEEEECCSSSSSBCS-----GG---G-GTG---------GGGSCCCTTSSBSS-
T ss_pred CCEEEEcChHHHHHHHHHHHhhCcCCCEEEEeCCCCCCCCC-----cc---C-CHH---------HHCCCCCHHHccCC-
Confidence 689999999999999999999988 899999976443210 00 0 000 00001111111111
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhCCeEEEEeEEEEecCCEEEEEecCCceEEEEecEEEEccCCCCCCCCCCccCCceE
Q 011787 122 PAMMAQKDKAVSNLTRGIEGLFKKNKVTYVKGYGKFISPSEVSVDTIEGGNTVVKGKNIIIATGSDVKSLPGITIDEKRI 201 (477)
Q Consensus 122 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~v~~~~g~~~~i~~d~lvlAtG~~~~~~~g~~~~~~~~ 201 (477)
...++.+.+++++..++..++.....+.+.+| ..+.||+||+|||++|..++..+.+...+
T Consensus 63 -----------------~~~~~~~~~i~~~~~~v~~id~~~~~v~~~~g--~~~~~d~lvlAtG~~p~~~~i~g~~~~~v 123 (404)
T 3fg2_P 63 -----------------PEKFFQDQAIELISDRMVSIDREGRKLLLASG--TAIEYGHLVLATGARNRMLDVPNASLPDV 123 (404)
T ss_dssp -----------------CHHHHHHTTEEEECCCEEEEETTTTEEEESSS--CEEECSEEEECCCEEECCCCSTTTTSTTE
T ss_pred -----------------CHHHHHhCCCEEEEEEEEEEECCCCEEEECCC--CEEECCEEEEeeCCCccCCCCCCCCCCcE
Confidence 12345567899888778888887777888787 68999999999999885443222223334
Q ss_pred e---cchhhhcc---cCCCCeeEEEcccHHHHHHHHHHHHcCCcEEEEEeCCCcCC-CCCHHHHHHHHHHHHhcCcEEEe
Q 011787 202 V---SSTGALAL---NEVPKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIVP-SMDGEIRKQFQRSLEKQKMKFML 274 (477)
Q Consensus 202 ~---~~~~~~~~---~~~~~~v~IiG~G~~g~e~a~~l~~~g~~Vtli~~~~~~~~-~~~~~~~~~~~~~l~~~gv~~~~ 274 (477)
+ +..+...+ ...+++++|||+|.+|+|+|..+.+.|.+|+++++.+.+++ .+++++.+.+.+.+++.||++++
T Consensus 124 ~~~~~~~d~~~l~~~~~~~~~vvViGgG~~g~e~A~~l~~~g~~Vtvv~~~~~~~~~~~~~~~~~~l~~~l~~~GV~i~~ 203 (404)
T 3fg2_P 124 LYLRTLDESEVLRQRMPDKKHVVVIGAGFIGLEFAATARAKGLEVDVVELAPRVMARVVTPEISSYFHDRHSGAGIRMHY 203 (404)
T ss_dssp ECCSSHHHHHHHHHHGGGCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSTTTTTSCHHHHHHHHHHHHHTTCEEEC
T ss_pred EEECCHHHHHHHHHHhhcCCeEEEECCCHHHHHHHHHHHhCCCEEEEEeCCCcchhhccCHHHHHHHHHHHHhCCcEEEE
Confidence 4 33343332 23589999999999999999999999999999999999877 58999999999999999999999
Q ss_pred CceEEEEEEcCCeEE-EEEeecCCCceEEEEcCEEEEeecCCCCCCCCCccccceeecCCCCeecCCCCCCCCCCeEEec
Q 011787 275 KTKVVGVDLSGDGVK-LTLEPAAGGEKTILEADVVLVSAGRTPFTAGLGLDKIGVETDKMGRIPVNERFATNIPGVYAIG 353 (477)
Q Consensus 275 ~~~v~~i~~~~~~~~-v~~~~~~~~~~~~i~~D~vi~a~G~~p~~~~l~~~~~gl~~~~~g~i~vd~~l~t~~~~vya~G 353 (477)
++.|++++.+++++. +++. +++++++|.||+|+|++|+.++ ++..|+..+ +| |.||++++|+.|+|||+|
T Consensus 204 ~~~v~~i~~~~~~v~~V~~~-----dG~~i~aD~Vv~a~G~~p~~~l--~~~~gl~~~-~G-i~vd~~~~t~~~~iya~G 274 (404)
T 3fg2_P 204 GVRATEIAAEGDRVTGVVLS-----DGNTLPCDLVVVGVGVIPNVEI--AAAAGLPTA-AG-IIVDQQLLTSDPHISAIG 274 (404)
T ss_dssp SCCEEEEEEETTEEEEEEET-----TSCEEECSEEEECCCEEECCHH--HHHTTCCBS-SS-EEECTTSBCSSTTEEECG
T ss_pred CCEEEEEEecCCcEEEEEeC-----CCCEEEcCEEEECcCCccCHHH--HHhCCCCCC-CC-EEECCCcccCCCCEEEee
Confidence 999999988766654 6654 5678999999999999999975 677888887 34 999999999999999999
Q ss_pred ccCCCCC----------chhHHHHHHHHHHHHHcCCCCCCCCCCCceEE--EcCCCeeeecCCHHHHHHcCCCEEEEEEe
Q 011787 354 DVIPGPM----------LAHKAEEDGVACVEFLAGKHGHVDYDKVPGVV--YTHPEVASVGKTEEQVKELGVEYRVGKFP 421 (477)
Q Consensus 354 D~~~~~~----------~~~~A~~~g~~aa~~i~~~~~~~~~~~~p~~~--~~~~~~~~~G~~~~~~~~~~~~~~~~~~~ 421 (477)
||+..+. .+..|..||+.||+||++... +|..+|++. +++..+..+|++.. .+-.+..
T Consensus 275 D~a~~~~~~~g~~~~~~~~~~A~~qg~~aa~~i~g~~~--~~~~~p~~~~~~~~~~~~~~G~~~~------~~~~~~~-- 344 (404)
T 3fg2_P 275 DCALFESVRFGETMRVESVQNATDQARCVAARLTGDAK--PYDGYPWFWSDQGDDKLQIVGLTAG------FDQVVIR-- 344 (404)
T ss_dssp GGEEEEETTTTEEECCCSHHHHHHHHHHHHHHTTTCCC--CCCCCCEEEEEETTEEEEEEECCTT------CCEEEEE--
T ss_pred cceeecCccCCceeeehHHHHHHHHHHHHHHHhCCCCC--CCCCCCceEeEECCcEEEEEeCCCC------CCEEEEE--
Confidence 9996432 478999999999999998763 577777643 44557778887642 1111111
Q ss_pred cCccccchhcCCCceEEEEEEECCCCeEEEEEEEcCCh
Q 011787 422 FLANSRAKAIDDAEGIVKILAEKETDKILGVHIMAPNA 459 (477)
Q Consensus 422 ~~~~~~~~~~~~~~~~~k~~~~~~~~~i~G~~~~g~~~ 459 (477)
...+...|.++++. +++++|+.++|...
T Consensus 345 --------~~~~~~~~~~~~~~--~~~~~g~~~~~~~~ 372 (404)
T 3fg2_P 345 --------GSVAERSFSAFCYK--AGKLIGIESVNRAA 372 (404)
T ss_dssp --------EETTTTEEEEEEEE--TTEEEEEEEESCHH
T ss_pred --------ecCCCCcEEEEEEE--CCEEEEEEEeCCHH
Confidence 11234568888885 68999999999863
No 50
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=100.00 E-value=7.4e-41 Score=319.91 Aligned_cols=293 Identities=26% Similarity=0.371 Sum_probs=213.8
Q ss_pred CCCcEEEECCChHHHHHHHHHHHCCCeEEEEecCCCCCceeeccCccCchhhhhhhHHHHHHHhhhhhCCccccccccCh
Q 011787 42 DENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSVEVDL 121 (477)
Q Consensus 42 ~~~dvvIIGgG~AGl~aA~~l~~~g~~V~lie~~~~~GG~~~~~~~~p~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 121 (477)
.+|||+||||||||++||.+|++.|++|+|||+ ..+||+|.+.+|+|..+-.. ....
T Consensus 5 ~~yDvvIIG~GpAGl~aA~~l~~~g~~V~liE~-~~~gG~~~~~~~i~~~p~~~----------------------~~~~ 61 (312)
T 4gcm_A 5 IDFDIAIIGAGPAGMTAAVYASRANLKTVMIER-GIPGGQMANTEEVENFPGFE----------------------MITG 61 (312)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHHTTCCEEEEES-SCTTGGGGGCSCBCCSTTCS----------------------SBCH
T ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCCEEEEec-CCCCCeeecccccCCcCCcc----------------------ccch
Confidence 369999999999999999999999999999998 68999999999986432100 0111
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhCCeEEEEeE-EEEecCCEEEEEecCCceEEEEecEEEEccCCCCC--CCCCCcc-C
Q 011787 122 PAMMAQKDKAVSNLTRGIEGLFKKNKVTYVKGY-GKFISPSEVSVDTIEGGNTVVKGKNIIIATGSDVK--SLPGITI-D 197 (477)
Q Consensus 122 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~~~~~~~v~~~~g~~~~i~~d~lvlAtG~~~~--~~~g~~~-~ 197 (477)
.++. ........+....+..+. ....+.....+...++ .++.||+||||||++|+ .+||... .
T Consensus 62 ~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~d~liiAtGs~~~~~~ipG~~~~~ 128 (312)
T 4gcm_A 62 PDLS-----------TKMFEHAKKFGAVYQYGDIKSVEDKGEYKVINFGN--KELTAKAVIIATGAEYKKIGVPGEQELG 128 (312)
T ss_dssp HHHH-----------HHHHHHHHHTTCEEEECCCCEEEECSSCEEEECSS--CEEEEEEEEECCCEEECCCCCTTTTTTB
T ss_pred HHHH-----------HHHHHHHhhccccccceeeeeeeeeecceeeccCC--eEEEeceeEEcccCccCcCCCCChhhhC
Confidence 1111 111223334455554442 2222222223333444 68999999999999885 4566542 2
Q ss_pred CceEecchhhhcccCCCCeeEEEcccHHHHHHHHHHHHcCCcEEEEEeCCCcCCCCCHHHHHHHHHHHHhcCcEEEeCce
Q 011787 198 EKRIVSSTGALALNEVPKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIVPSMDGEIRKQFQRSLEKQKMKFMLKTK 277 (477)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~~v~IiG~G~~g~e~a~~l~~~g~~Vtli~~~~~~~~~~~~~~~~~~~~~l~~~gv~~~~~~~ 277 (477)
...+.+..........+++++|||||++|+|+|..|++.|.+||++++.+++++... ...+.+++.++.......
T Consensus 129 ~~~v~~~~~~~~~~~~~k~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~ 203 (312)
T 4gcm_A 129 GRGVSYCAVCDGAFFKNKRLFVIGGGDSAVEEGTFLTKFADKVTIVHRRDELRAQRI-----LQDRAFKNDKIDFIWSHT 203 (312)
T ss_dssp TTTEESCHHHHGGGGTTCEEEEECCSHHHHHHHHHHTTTCSEEEEECSSSSCCSCHH-----HHHHHHHCTTEEEECSEE
T ss_pred CccEEeeeccCccccCCCEEEEECCCHHHHHHHHHHHhcCCEEEEEecccccCcchh-----HHHHHHHhcCcceeeecc
Confidence 234444444444445689999999999999999999999999999999998765321 224556777888888888
Q ss_pred EEEEEEcCCeEE-EEEeecCCCceEEEEcCEEEEeecCCCCCCCCCccccceeecCCCCeecCCCCCCCCCCeEEecccC
Q 011787 278 VVGVDLSGDGVK-LTLEPAAGGEKTILEADVVLVSAGRTPFTAGLGLDKIGVETDKMGRIPVNERFATNIPGVYAIGDVI 356 (477)
Q Consensus 278 v~~i~~~~~~~~-v~~~~~~~~~~~~i~~D~vi~a~G~~p~~~~l~~~~~gl~~~~~g~i~vd~~l~t~~~~vya~GD~~ 356 (477)
+..+...+.... ........+++..+++|.|++++|..|+... ++..++. +++|+|.||+++|||+|||||+|||+
T Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~v~~~~g~~~~~~~--~~~~g~~-~~~G~I~vd~~~~Ts~pgIyA~GDv~ 280 (312)
T 4gcm_A 204 LKSINEKDGKVGSVTLTSTKDGSEETHEADGVFIYIGMKPLTAP--FKDLGIT-NDVGYIVTKDDMTTSVPGIFAAGDVR 280 (312)
T ss_dssp EEEEEEETTEEEEEEEEETTTCCEEEEECSEEEECSCEEESCGG--GGGGTCB-CTTSCBCCCTTSBCSSTTEEECSTTB
T ss_pred eeeeeccccccccceeeeecCCceeEEeeeeEEeecCCCcCchh--HHhccee-cCCCeEeeCCCCccCCCCEEEEeecC
Confidence 777766555433 3333445567789999999999999999986 5666665 55789999999999999999999999
Q ss_pred C-CCCchhHHHHHHHHHHHHHcC
Q 011787 357 P-GPMLAHKAEEDGVACVEFLAG 378 (477)
Q Consensus 357 ~-~~~~~~~A~~~g~~aa~~i~~ 378 (477)
+ .+.+++.|+.||+.||.+|..
T Consensus 281 ~~~~~~~~~A~~~G~~AA~~i~~ 303 (312)
T 4gcm_A 281 DKGLRQIVTATGDGSIAAQSAAE 303 (312)
T ss_dssp SCSCCSHHHHHHHHHHHHHHHHH
T ss_pred CCcchHHHHHHHHHHHHHHHHHH
Confidence 6 457899999999999999964
No 51
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=100.00 E-value=1.5e-40 Score=318.19 Aligned_cols=299 Identities=23% Similarity=0.281 Sum_probs=217.1
Q ss_pred CCCCCcEEEECCChHHHHHHHHHHHCCCeEEEEecCCCCCceeeccCccCchhhhhhhHHHHHHHhhhhhCCcccccccc
Q 011787 40 ASDENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSVEV 119 (477)
Q Consensus 40 ~~~~~dvvIIGgG~AGl~aA~~l~~~g~~V~lie~~~~~GG~~~~~~~~p~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~ 119 (477)
|+..|||+||||||||++||.+|+++|++|+|||+ ...||.|.+ +|+|++.++... .+++ ..+
T Consensus 1 M~~~yDvvIIG~GpAGl~AA~~la~~g~~v~liE~-~~~gg~~~~-G~~~~~~~i~~~------------~g~~---~~i 63 (314)
T 4a5l_A 1 MSNIHDVVIIGSGPAAHTAAIYLGRSSLKPVMYEG-FMAGGVAAG-GQLTTTTIIENF------------PGFP---NGI 63 (314)
T ss_dssp -CCCEEEEEECCSHHHHHHHHHHHHTTCCCEEECC-SSGGGCCTT-CGGGGSSEECCS------------TTCT---TCE
T ss_pred CCCCCcEEEECCCHHHHHHHHHHHHCCCCEEEEec-CCCCCcccC-CCcCChHHhhhc------------cCCc---ccC
Confidence 45579999999999999999999999999999998 567888876 787765432211 0111 011
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHHhhhCCeEEEEeEEEEe--cCCEEEEEecCCceEEEEecEEEEccCCCCC--CCCCCc
Q 011787 120 DLPAMMAQKDKAVSNLTRGIEGLFKKNKVTYVKGYGKFI--SPSEVSVDTIEGGNTVVKGKNIIIATGSDVK--SLPGIT 195 (477)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~--~~~~~~v~~~~g~~~~i~~d~lvlAtG~~~~--~~~g~~ 195 (477)
+..++ .........+.++++....+... +.....+.+.++ .++.||+||||||++|+ .+||.+
T Consensus 64 ~~~~l-----------~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~--~~~~~~~liiATG~~~~~~~ipG~~ 130 (314)
T 4a5l_A 64 DGNEL-----------MMNMRTQSEKYGTTIITETIDHVDFSTQPFKLFTEEG--KEVLTKSVIIATGATAKRMHVPGED 130 (314)
T ss_dssp EHHHH-----------HHHHHHHHHHTTCEEECCCEEEEECSSSSEEEEETTC--CEEEEEEEEECCCEEECCCCCTTHH
T ss_pred CHHHH-----------HHHHHHHHhhcCcEEEEeEEEEeecCCCceEEEECCC--eEEEEeEEEEcccccccccCCCccc
Confidence 22222 22233445566777776655443 334455556665 78999999999999885 455543
Q ss_pred cC-CceEecchhhhcc--cCCCCeeEEEcccHHHHHHHHHHHHcCCcEEEEEeCCCcCCCCCHHHHHHHHHHHHhcCcEE
Q 011787 196 ID-EKRIVSSTGALAL--NEVPKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIVPSMDGEIRKQFQRSLEKQKMKF 272 (477)
Q Consensus 196 ~~-~~~~~~~~~~~~~--~~~~~~v~IiG~G~~g~e~a~~l~~~g~~Vtli~~~~~~~~~~~~~~~~~~~~~l~~~gv~~ 272 (477)
.. ...+......... ...+++++|||+|++|+|+|..|+++|.+||++++.+.... +.. ...+.+...++..
T Consensus 131 ~~~~~~~~~~~~~~~~~~~~~~~~vvViGgG~ig~e~A~~l~~~G~~Vt~v~~~~~~~~--~~~---~~~~~~~~~~~~~ 205 (314)
T 4a5l_A 131 KYWQNGVSACAICDGAVPIFRNKVLMVVGGGDAAMEEALHLTKYGSKVIILHRRDAFRA--SKT---MQERVLNHPKIEV 205 (314)
T ss_dssp HHBTTTEESCHHHHTTSGGGTTSEEEEECSSHHHHHHHHHHTTTSSEEEEECSSSSCCS--CHH---HHHHHHTCTTEEE
T ss_pred cccccceeeehhhhhhhhhcCCCeEEEECCChHHHHHHHHHHHhCCeeeeecccccccc--cch---hhhhhhcccceee
Confidence 21 2233333333322 23579999999999999999999999999999998776532 222 2344556678899
Q ss_pred EeCceEEEEEEcCCeE-EEEEeecCCCceEEEEcCEEEEeecCCCCCCCCCccccceeecCCCCeecCCCCCCCCCCeEE
Q 011787 273 MLKTKVVGVDLSGDGV-KLTLEPAAGGEKTILEADVVLVSAGRTPFTAGLGLDKIGVETDKMGRIPVNERFATNIPGVYA 351 (477)
Q Consensus 273 ~~~~~v~~i~~~~~~~-~v~~~~~~~~~~~~i~~D~vi~a~G~~p~~~~l~~~~~gl~~~~~g~i~vd~~l~t~~~~vya 351 (477)
+....+.++...++.. .+.+.....++++++++|.|++++|++||++++ + .++..+++|.+ ||+++|||+|||||
T Consensus 206 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~~d~vi~a~G~~pn~~~l--~-~~~~~~~~G~i-v~~~~~Ts~pgIyA 281 (314)
T 4a5l_A 206 IWNSELVELEGDGDLLNGAKIHNLVSGEYKVVPVAGLFYAIGHSPNSKFL--G-GQVKTADDGYI-LTEGPKTSVDGVFA 281 (314)
T ss_dssp ECSEEEEEEEESSSSEEEEEEEETTTCCEEEEECSEEEECSCEEESCGGG--T-TSSCBCTTSCB-CCBTTBCSSTTEEE
T ss_pred EeeeeeEEEEeeeeccceeEEeecccccceeeccccceEecccccChhHh--c-ccceEcCCeeE-eCCCCccCCCCEEE
Confidence 9999999988765543 355555566778899999999999999999874 2 34777777755 89999999999999
Q ss_pred ecccCCCCC-chhHHHHHHHHHHHHHc
Q 011787 352 IGDVIPGPM-LAHKAEEDGVACVEFLA 377 (477)
Q Consensus 352 ~GD~~~~~~-~~~~A~~~g~~aa~~i~ 377 (477)
+|||++.|. ++..|+.||+.||.++.
T Consensus 282 ~GDv~~~~~~~~~~A~~~G~~AA~~~~ 308 (314)
T 4a5l_A 282 CGDVCDRVYRQAIVAAGSGCMAALSCE 308 (314)
T ss_dssp CSTTTCSSCCCHHHHHHHHHHHHHHHH
T ss_pred EEeccCCcchHHHHHHHHHHHHHHHHH
Confidence 999998764 88999999999999875
No 52
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=100.00 E-value=9.8e-39 Score=307.03 Aligned_cols=295 Identities=24% Similarity=0.271 Sum_probs=218.0
Q ss_pred CCCCcEEEECCChHHHHHHHHHHHCCCeEEEEecCCCCCceeeccCccCchhhhhhhHHHHHHHhhhhhCCccccccccC
Q 011787 41 SDENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSVEVD 120 (477)
Q Consensus 41 ~~~~dvvIIGgG~AGl~aA~~l~~~g~~V~lie~~~~~GG~~~~~~~~p~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~~ 120 (477)
+.++||+|||||+||+++|..|++.|++|+|||++ .+||.|.+..+..... ++.. .++
T Consensus 6 ~~~~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~~-~~gg~~~~~~~~~~~~------------------~~~~---~~~ 63 (325)
T 2q7v_A 6 AHDYDVVIIGGGPAGLTAAIYTGRAQLSTLILEKG-MPGGQIAWSEEVENFP------------------GFPE---PIA 63 (325)
T ss_dssp CEEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESS-CTTGGGGGCSCBCCST------------------TCSS---CBC
T ss_pred cccCCEEEECCCHHHHHHHHHHHHcCCcEEEEeCC-CCCcccccccccccCC------------------CCCC---CCC
Confidence 34689999999999999999999999999999997 7899876654321100 0000 111
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhhhCCeEEEEeEEEEecCC---E--EEEEecCCceEEEEecEEEEccCCCCCC--CCC
Q 011787 121 LPAMMAQKDKAVSNLTRGIEGLFKKNKVTYVKGYGKFISPS---E--VSVDTIEGGNTVVKGKNIIIATGSDVKS--LPG 193 (477)
Q Consensus 121 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~---~--~~v~~~~g~~~~i~~d~lvlAtG~~~~~--~~g 193 (477)
... +...+.+.+++.+++++.+.+..++.. . +.+.+.+| ..+.||+||+|||+.|.. +|+
T Consensus 64 ~~~-----------~~~~l~~~~~~~gv~~~~~~v~~i~~~~~~~~~~~v~~~~g--~~~~~~~vv~AtG~~~~~~~i~g 130 (325)
T 2q7v_A 64 GME-----------LAQRMHQQAEKFGAKVEMDEVQGVQHDATSHPYPFTVRGYN--GEYRAKAVILATGADPRKLGIPG 130 (325)
T ss_dssp HHH-----------HHHHHHHHHHHTTCEEEECCEEEEEECTTSSSCCEEEEESS--CEEEEEEEEECCCEEECCCCCTT
T ss_pred HHH-----------HHHHHHHHHHHcCCEEEeeeEEEEEeccCCCceEEEEECCC--CEEEeCEEEECcCCCcCCCCCCC
Confidence 111 222334455667898888777666533 2 56666666 679999999999998753 344
Q ss_pred Ccc-CCceEecchhhhcccCCCCeeEEEcccHHHHHHHHHHHHcCCcEEEEEeCCCcCCCCCHHHHHHHHHHHHhcCcEE
Q 011787 194 ITI-DEKRIVSSTGALALNEVPKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIVPSMDGEIRKQFQRSLEKQKMKF 272 (477)
Q Consensus 194 ~~~-~~~~~~~~~~~~~~~~~~~~v~IiG~G~~g~e~a~~l~~~g~~Vtli~~~~~~~~~~~~~~~~~~~~~l~~~gv~~ 272 (477)
... ....+++..........+++++|||+|.+|+|+|..|++.|.+|+++++.+.+.. ++.+. .+.+++.||++
T Consensus 131 ~~~~~~~~~~~~~~~~~~~~~~~~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~--~~~~~---~~l~~~~gv~i 205 (325)
T 2q7v_A 131 EDNFWGKGVSTCATCDGFFYKGKKVVVIGGGDAAVEEGMFLTKFADEVTVIHRRDTLRA--NKVAQ---ARAFANPKMKF 205 (325)
T ss_dssp TTTTBTTTEESCHHHHGGGGTTCEEEEECCSHHHHHHHHHHTTTCSEEEEECSSSSCCS--CHHHH---HHHHTCTTEEE
T ss_pred hhhccCceEEEeccCCHHHcCCCEEEEECCCHHHHHHHHHHHhcCCEEEEEeCCCcCCc--chHHH---HHHHhcCCceE
Confidence 331 1133444433333444579999999999999999999999999999999886542 33332 23334569999
Q ss_pred EeCceEEEEEEcCCeEEEEEeecCCCceEEEEcCEEEEeecCCCCCCCCCccccceeecCCCCeecCCCCCCCCCCeEEe
Q 011787 273 MLKTKVVGVDLSGDGVKLTLEPAAGGEKTILEADVVLVSAGRTPFTAGLGLDKIGVETDKMGRIPVNERFATNIPGVYAI 352 (477)
Q Consensus 273 ~~~~~v~~i~~~~~~~~v~~~~~~~~~~~~i~~D~vi~a~G~~p~~~~l~~~~~gl~~~~~g~i~vd~~l~t~~~~vya~ 352 (477)
+++++++++..++....+.+.+..+++..++++|.|++|+|++||.++ +++. +.++++|+|.||++++|+.|+|||+
T Consensus 206 ~~~~~v~~i~~~~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~--l~~~-~~~~~~g~i~vd~~~~t~~~~vya~ 282 (325)
T 2q7v_A 206 IWDTAVEEIQGADSVSGVKLRNLKTGEVSELATDGVFIFIGHVPNTAF--VKDT-VSLRDDGYVDVRDEIYTNIPMLFAA 282 (325)
T ss_dssp ECSEEEEEEEESSSEEEEEEEETTTCCEEEEECSEEEECSCEEESCGG--GTTT-SCBCTTSCBCCBTTTBCSSTTEEEC
T ss_pred ecCCceEEEccCCcEEEEEEEECCCCcEEEEEcCEEEEccCCCCChHH--Hhhh-cccCCCccEecCCCCccCCCCEEEe
Confidence 999999999875433356665333444568999999999999999876 4555 7778889999999999999999999
Q ss_pred cccCCC-CCchhHHHHHHHHHHHHHcC
Q 011787 353 GDVIPG-PMLAHKAEEDGVACVEFLAG 378 (477)
Q Consensus 353 GD~~~~-~~~~~~A~~~g~~aa~~i~~ 378 (477)
|||+.. +.++..|..||+.||.||..
T Consensus 283 GD~~~~~~~~~~~A~~~g~~aa~~i~~ 309 (325)
T 2q7v_A 283 GDVSDYIYRQLATSVGAGTRAAMMTER 309 (325)
T ss_dssp STTTCSSCCCHHHHHHHHHHHHHHHHH
T ss_pred ecccCccHHHHHHHHHHHHHHHHHHHH
Confidence 999986 68999999999999999974
No 53
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=100.00 E-value=6.6e-39 Score=324.26 Aligned_cols=327 Identities=18% Similarity=0.210 Sum_probs=228.8
Q ss_pred CCCCCCcEEEECCChHHHHHHHHHHHC--CCeEEEEecCCCCCceeeccCccCchhhhhhhHHHHHHHhhhhhCCccccc
Q 011787 39 SASDENDVVVIGGGPGGYVAAIKAAQL--GLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSS 116 (477)
Q Consensus 39 ~~~~~~dvvIIGgG~AGl~aA~~l~~~--g~~V~lie~~~~~GG~~~~~~~~p~~~l~~~~~~~~~~~~~~~~~g~~~~~ 116 (477)
.++.++||+|||||+||++||..|++. +.+|+|||+++.++ +..|.+++.++...... ........++....
T Consensus 7 ~~~~~~~vvIIGgG~AGl~aA~~L~~~~~g~~V~lie~~~~~~----y~r~~lsk~l~~~~~~~--~~~~~~~~~~~~~~ 80 (493)
T 1m6i_A 7 KAPSHVPFLLIGGGTAAFAAARSIRARDPGARVLIVSEDPELP----YMRPPLSKELWFSDDPN--VTKTLRFKQWNGKE 80 (493)
T ss_dssp -CCSEEEEEEESCSHHHHHHHHHHHHHSTTCEEEEEESSSSCC----BCSGGGGTGGGCC--CT--HHHHCEEECTTSCE
T ss_pred CCCCcCCEEEECChHHHHHHHHHHHhcCCCCeEEEEeCCCCCC----CCCCCCCHHhhcCCccc--hhhccccccccccc
Confidence 345578999999999999999999887 89999999977654 22344455544322110 00000000110000
Q ss_pred cccChHHHHHHHHHHHHHHHHHHHHHhhhCCeEEEEe-EEEEecCCEEEEEecCCceEEEEecEEEEccCCCCCCCCCCc
Q 011787 117 VEVDLPAMMAQKDKAVSNLTRGIEGLFKKNKVTYVKG-YGKFISPSEVSVDTIEGGNTVVKGKNIIIATGSDVKSLPGIT 195 (477)
Q Consensus 117 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-~~~~~~~~~~~v~~~~g~~~~i~~d~lvlAtG~~~~~~~g~~ 195 (477)
..+.+.....+.. . ..+ ....+.+++++.+ .+..++....+|.+.+| .++.||+||||||++|+.+|..+
T Consensus 81 ~~~~~~~~~~~~~-----~-~~l-~~~~~~gv~~~~g~~v~~id~~~~~V~~~~g--~~i~yd~lviATGs~p~~~~~~~ 151 (493)
T 1m6i_A 81 RSIYFQPPSFYVS-----A-QDL-PHIENGGVAVLTGKKVVQLDVRDNMVKLNDG--SQITYEKCLIATGGTPRSLSAID 151 (493)
T ss_dssp EESBSSCGGGSBC-----T-TTT-TTSTTCEEEEEETCCEEEEEGGGTEEEETTS--CEEEEEEEEECCCEEECCCHHHH
T ss_pred ccccccchHhhcc-----h-hhh-hhhhcCCeEEEcCCEEEEEECCCCEEEECCC--CEEECCEEEECCCCCCCCCCCcc
Confidence 0000000000000 0 000 0012468999987 67777766667777777 67999999999999987655322
Q ss_pred cC----CceE---ecchhhhccc---CCCCeeEEEcccHHHHHHHHHHHH----cCCcEEEEEeCCCcCC-CCCHHHHHH
Q 011787 196 ID----EKRI---VSSTGALALN---EVPKKLVVIGAGYIGLEMGSVWAR----LGSEVTVVEFAADIVP-SMDGEIRKQ 260 (477)
Q Consensus 196 ~~----~~~~---~~~~~~~~~~---~~~~~v~IiG~G~~g~e~a~~l~~----~g~~Vtli~~~~~~~~-~~~~~~~~~ 260 (477)
.. ...+ .+.+++..+. ..+++++|||+|++|+|+|..|++ .|.+|+++++.+.+++ .+++++.+.
T Consensus 152 ~~~~~~~~~v~~~~~~~d~~~l~~~~~~~~~vvViGgG~iG~E~A~~l~~~~~~~g~~V~~v~~~~~~~~~~l~~~~~~~ 231 (493)
T 1m6i_A 152 RAGAEVKSRTTLFRKIGDFRSLEKISREVKSITIIGGGFLGSELACALGRKARALGTEVIQLFPEKGNMGKILPEYLSNW 231 (493)
T ss_dssp TSCHHHHHTEEECCSHHHHHHHHHHHHHCSEEEEECCSHHHHHHHHHHHHHHHHHTCEEEEECSSSSTTTTTSCHHHHHH
T ss_pred cccccccCceEEEcCHHHHHHHHHHhhcCCeEEEECCCHHHHHHHHHHHhhhhhcCCEEEEEecCcccccccCCHHHHHH
Confidence 11 1122 2344444333 248999999999999999999876 5788999998876654 578889999
Q ss_pred HHHHHHhcCcEEEeCceEEEEEEcCCeEEEEEeecCCCceEEEEcCEEEEeecCCCCCCCCCccccceeecC-CCCeecC
Q 011787 261 FQRSLEKQKMKFMLKTKVVGVDLSGDGVKLTLEPAAGGEKTILEADVVLVSAGRTPFTAGLGLDKIGVETDK-MGRIPVN 339 (477)
Q Consensus 261 ~~~~l~~~gv~~~~~~~v~~i~~~~~~~~v~~~~~~~~~~~~i~~D~vi~a~G~~p~~~~l~~~~~gl~~~~-~g~i~vd 339 (477)
+.+.++++||++++++.|++++.+++.+.+++. +++++++|.||+|+|.+||+.+ ++.+|+++++ +|+|.||
T Consensus 232 ~~~~l~~~GV~v~~~~~V~~i~~~~~~~~v~l~-----dG~~i~aD~Vv~a~G~~pn~~l--~~~~gl~~~~~~ggi~Vd 304 (493)
T 1m6i_A 232 TMEKVRREGVKVMPNAIVQSVGVSSGKLLIKLK-----DGRKVETDHIVAAVGLEPNVEL--AKTGGLEIDSDFGGFRVN 304 (493)
T ss_dssp HHHHHHTTTCEEECSCCEEEEEEETTEEEEEET-----TSCEEEESEEEECCCEEECCTT--HHHHTCCBCTTTCSEECC
T ss_pred HHHHHHhcCCEEEeCCEEEEEEecCCeEEEEEC-----CCCEEECCEEEECCCCCccHHH--HHHcCCccccCCCcEEEC
Confidence 999999999999999999999877666666664 5578999999999999999985 6778888875 6899999
Q ss_pred CCCCCCCCCeEEecccCCCC---------CchhHHHHHHHHHHHHHcCCCCCCCCCCCce
Q 011787 340 ERFATNIPGVYAIGDVIPGP---------MLAHKAEEDGVACVEFLAGKHGHVDYDKVPG 390 (477)
Q Consensus 340 ~~l~t~~~~vya~GD~~~~~---------~~~~~A~~~g~~aa~~i~~~~~~~~~~~~p~ 390 (477)
++||| .|+|||+|||+..+ ..+..|..||+.||.||++... +|...|+
T Consensus 305 ~~l~t-~~~IyA~GD~a~~~~~~~g~~~~~~~~~A~~qg~~aa~ni~g~~~--~~~~~~~ 361 (493)
T 1m6i_A 305 AELQA-RSNIWVAGDAACFYDIKLGRRRVEHHDHAVVSGRLAGENMTGAAK--PYWHQSM 361 (493)
T ss_dssp TTCEE-ETTEEECGGGEEEEETTTEEECCCCHHHHHHHHHHHHHHHTSCCC--CCCCCCE
T ss_pred CCccc-CCCeeEeeeeEeccCcccCccccchHHHHHHHHHHHHHHhcCCCC--CcCCcCc
Confidence 99998 69999999999532 2466899999999999998754 4555565
No 54
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=100.00 E-value=1.7e-38 Score=304.93 Aligned_cols=292 Identities=24% Similarity=0.289 Sum_probs=222.2
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCeEEEEecCCCCCceeeccCccCchhhhhhhHHHHHHHhhhhhCCccccccccChH
Q 011787 43 ENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSVEVDLP 122 (477)
Q Consensus 43 ~~dvvIIGgG~AGl~aA~~l~~~g~~V~lie~~~~~GG~~~~~~~~p~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 122 (477)
++||+|||||+||+++|.+|++.|++|+|||++ +||.|.+.+...... +.. ....
T Consensus 15 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~--~gg~~~~~~~~~~~~------------------~~~----~~~~- 69 (323)
T 3f8d_A 15 KFDVIIVGLGPAAYGAALYSARYMLKTLVIGET--PGGQLTEAGIVDDYL------------------GLI----EIQA- 69 (323)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESS--TTGGGGGCCEECCST------------------TST----TEEH-
T ss_pred ccCEEEECccHHHHHHHHHHHHCCCcEEEEecc--CCCeecccccccccC------------------CCC----CCCH-
Confidence 589999999999999999999999999999996 899876543221100 000 0011
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhCCeEEEEeEEEEecCC--EEEEEecCCceEEEEecEEEEccCCCCCC--CCCCcc-C
Q 011787 123 AMMAQKDKAVSNLTRGIEGLFKKNKVTYVKGYGKFISPS--EVSVDTIEGGNTVVKGKNIIIATGSDVKS--LPGITI-D 197 (477)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~--~~~v~~~~g~~~~i~~d~lvlAtG~~~~~--~~g~~~-~ 197 (477)
..+...+.+.+.+.+++++...+..++.. .+.+.+.++ ..+.||+||+|||+.|.. +|+... .
T Consensus 70 ----------~~~~~~~~~~~~~~~v~~~~~~v~~i~~~~~~~~v~~~~g--~~~~~d~lvlAtG~~~~~~~i~g~~~~~ 137 (323)
T 3f8d_A 70 ----------SDMIKVFNKHIEKYEVPVLLDIVEKIENRGDEFVVKTKRK--GEFKADSVILGIGVKRRKLGVPGEQEFA 137 (323)
T ss_dssp ----------HHHHHHHHHHHHTTTCCEEESCEEEEEEC--CEEEEESSS--CEEEEEEEEECCCCEECCCCCTTTTTTB
T ss_pred ----------HHHHHHHHHHHHHcCCEEEEEEEEEEEecCCEEEEEECCC--CEEEcCEEEECcCCCCccCCCCchhhhc
Confidence 11233344556667888877777666543 567777776 689999999999998753 344432 1
Q ss_pred CceEecchhhhcccCCCCeeEEEcccHHHHHHHHHHHHcCCcEEEEEeCCCcCCCCCHHHHHHHHHHHHhcCcEEEeCce
Q 011787 198 EKRIVSSTGALALNEVPKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIVPSMDGEIRKQFQRSLEKQKMKFMLKTK 277 (477)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~~v~IiG~G~~g~e~a~~l~~~g~~Vtli~~~~~~~~~~~~~~~~~~~~~l~~~gv~~~~~~~ 277 (477)
...+............+++++|+|+|.+++|+|..|.+.|.+|+++++.+.+++ +++. +.+.+++.||+++++++
T Consensus 138 ~~~~~~~~~~~~~~~~~~~v~vvG~G~~~~e~a~~l~~~g~~v~~~~~~~~~~~--~~~~---~~~~~~~~gv~~~~~~~ 212 (323)
T 3f8d_A 138 GRGISYCSVADAPLFKNRVVAVIGGGDSALEGAEILSSYSTKVYLIHRRDTFKA--QPIY---VETVKKKPNVEFVLNSV 212 (323)
T ss_dssp TTTEESCHHHHGGGGTTCEEEEECCSHHHHHHHHHHHHHSSEEEEECSSSSCCS--CHHH---HHHHHTCTTEEEECSEE
T ss_pred CCceEEeccCCHhHcCCCEEEEECCCHHHHHHHHHHHHhCCeEEEEEeCCCCCc--CHHH---HHHHHhCCCcEEEeCCE
Confidence 133434333333444589999999999999999999999999999999988765 3332 33344455999999999
Q ss_pred EEEEEEcCCeEEEEEeecCCCceEEEEcCEEEEeecCCCCCCCCCccccceeecCCCCeecCCCCCCCCCCeEEecccCC
Q 011787 278 VVGVDLSGDGVKLTLEPAAGGEKTILEADVVLVSAGRTPFTAGLGLDKIGVETDKMGRIPVNERFATNIPGVYAIGDVIP 357 (477)
Q Consensus 278 v~~i~~~~~~~~v~~~~~~~~~~~~i~~D~vi~a~G~~p~~~~l~~~~~gl~~~~~g~i~vd~~l~t~~~~vya~GD~~~ 357 (477)
+++++.+++...+++.+..+++..++++|.|++|+|++|+.++ ++..|+.++++|+|.||++++|+.|+|||+|||++
T Consensus 213 v~~i~~~~~~~~v~~~~~~~g~~~~~~~D~vv~a~G~~p~~~~--~~~~g~~~~~~g~i~vd~~~~t~~~~vya~GD~~~ 290 (323)
T 3f8d_A 213 VKEIKGDKVVKQVVVENLKTGEIKELNVNGVFIEIGFDPPTDF--AKSNGIETDTNGYIKVDEWMRTSVPGVFAAGDCTS 290 (323)
T ss_dssp EEEEEESSSEEEEEEEETTTCCEEEEECSEEEECCCEECCHHH--HHHTTCCBCTTSSBCCCTTCBCSSTTEEECSTTBS
T ss_pred EEEEeccCceeEEEEEECCCCceEEEEcCEEEEEECCCCChhH--HhhcCeeecCCCcEecCCCceecCCCEEEcceecC
Confidence 9999877555557776544455568999999999999999775 67888999999999999999999999999999998
Q ss_pred C---CCchhHHHHHHHHHHHHHcC
Q 011787 358 G---PMLAHKAEEDGVACVEFLAG 378 (477)
Q Consensus 358 ~---~~~~~~A~~~g~~aa~~i~~ 378 (477)
. +..+..|..||+.||.+|..
T Consensus 291 ~~~~~~~~~~A~~~g~~aa~~i~~ 314 (323)
T 3f8d_A 291 AWLGFRQVITAVAQGAVAATSAYR 314 (323)
T ss_dssp TTTTCCCHHHHHHHHHHHHHHHHH
T ss_pred CCCcccceeehhhHHHHHHHHHHH
Confidence 5 78999999999999999863
No 55
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=100.00 E-value=5.3e-38 Score=300.00 Aligned_cols=293 Identities=23% Similarity=0.253 Sum_probs=217.6
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCC-eEEEEecCCCCCceeeccCccCchhhhhhhHHHHHHHhhhhhCCccccccccCh
Q 011787 43 ENDVVVIGGGPGGYVAAIKAAQLGL-KTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSVEVDL 121 (477)
Q Consensus 43 ~~dvvIIGgG~AGl~aA~~l~~~g~-~V~lie~~~~~GG~~~~~~~~p~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 121 (477)
++||+|||||+||+++|..|++.|+ +|+|+|+ ..+||.|.+..+..... ++. ..++.
T Consensus 1 ~~dvvIIG~G~aGl~aA~~l~~~g~~~v~lie~-~~~gg~~~~~~~~~~~~------------------~~~---~~~~~ 58 (311)
T 2q0l_A 1 MIDCAIIGGGPAGLSAGLYATRGGVKNAVLFEK-GMPGGQITGSSEIENYP------------------GVK---EVVSG 58 (311)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCSSEEEECS-SSTTCGGGGCSCBCCST------------------TCC---SCBCH
T ss_pred CceEEEECccHHHHHHHHHHHHCCCCcEEEEcC-CCCCcccccccccccCC------------------CCc---ccCCH
Confidence 3799999999999999999999999 9999999 57889876654322110 000 01122
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhCCeEEEEeEEEEec--CCEEEEEecCCceEEEEecEEEEccCCCCCCC--CCCc-c
Q 011787 122 PAMMAQKDKAVSNLTRGIEGLFKKNKVTYVKGYGKFIS--PSEVSVDTIEGGNTVVKGKNIIIATGSDVKSL--PGIT-I 196 (477)
Q Consensus 122 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~--~~~~~v~~~~g~~~~i~~d~lvlAtG~~~~~~--~g~~-~ 196 (477)
.. +...+...+.+.+++++.+++..++ .+.+.+.+.++ ..+.||+||+|||+.|..+ |+.. .
T Consensus 59 ~~-----------~~~~l~~~~~~~~v~~~~~~v~~i~~~~~~~~v~~~~g--~~~~~~~vv~AtG~~~~~~~~~g~~~~ 125 (311)
T 2q0l_A 59 LD-----------FMQPWQEQCFRFGLKHEMTAVQRVSKKDSHFVILAEDG--KTFEAKSVIIATGGSPKRTGIKGESEY 125 (311)
T ss_dssp HH-----------HHHHHHHHHHTTSCEEECSCEEEEEEETTEEEEEETTS--CEEEEEEEEECCCEEECCCCCBTHHHH
T ss_pred HH-----------HHHHHHHHHHHcCCEEEEEEEEEEEEcCCEEEEEEcCC--CEEECCEEEECCCCCCCCCCCCChhhc
Confidence 22 2222334456678888776665554 45566766666 5799999999999887543 3332 1
Q ss_pred CCceEecchhhhcccCCCCeeEEEcccHHHHHHHHHHHHcCCcEEEEEeCCCcCCCCCHHHHHHHHHHHH-hcCcEEEeC
Q 011787 197 DEKRIVSSTGALALNEVPKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIVPSMDGEIRKQFQRSLE-KQKMKFMLK 275 (477)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~~v~IiG~G~~g~e~a~~l~~~g~~Vtli~~~~~~~~~~~~~~~~~~~~~l~-~~gv~~~~~ 275 (477)
....+++..........+++++|||+|.+|+|+|..|++.|.+|+++++.+.+. .++.+ .+.+. +.||+++++
T Consensus 126 ~~~~~~~~~~~~~~~~~~~~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~--~~~~~----~~~l~~~~gv~v~~~ 199 (311)
T 2q0l_A 126 WGKGVSTCATCDGFFYKNKEVAVLGGGDTAVEEAIYLANICKKVYLIHRRDGFR--CAPIT----LEHAKNNDKIEFLTP 199 (311)
T ss_dssp BTTTEESCHHHHGGGGTTSEEEEECCSHHHHHHHHHHHTTSSEEEEECSSSSCC--SCHHH----HHHHHTCTTEEEETT
T ss_pred cCCcEEEeecCChhhcCCCEEEEECCCHHHHHHHHHHHhcCCEEEEEeeCCccC--CCHHH----HHHHhhCCCeEEEeC
Confidence 123344444444444557999999999999999999999999999999988763 34443 33444 479999999
Q ss_pred ceEEEEEEcCCeE-EEEEeecCCCceEEEEcCEEEEeecCCCCCCCCCccccc----eeecCCCCeecCCCCCCCCCCeE
Q 011787 276 TKVVGVDLSGDGV-KLTLEPAAGGEKTILEADVVLVSAGRTPFTAGLGLDKIG----VETDKMGRIPVNERFATNIPGVY 350 (477)
Q Consensus 276 ~~v~~i~~~~~~~-~v~~~~~~~~~~~~i~~D~vi~a~G~~p~~~~l~~~~~g----l~~~~~g~i~vd~~l~t~~~~vy 350 (477)
++++++..+++++ .+.+....++...++++|.|++|+|++|++++ ++..+ +.++++|+|.||+++||+.|+||
T Consensus 200 ~~v~~i~~~~~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~--l~~~g~~~~l~~~~~g~i~vd~~~~t~~~~vy 277 (311)
T 2q0l_A 200 YVVEEIKGDASGVSSLSIKNTATNEKRELVVPGFFIFVGYDVNNAV--LKQEDNSMLCKCDEYGSIVVDFSMKTNVQGLF 277 (311)
T ss_dssp EEEEEEEEETTEEEEEEEEETTTCCEEEEECSEEEECSCEEECCGG--GBCTTSCBSSCBCTTSCBCCCTTCBCSSTTEE
T ss_pred CEEEEEECCCCcEeEEEEEecCCCceEEEecCEEEEEecCccChhh--hhcccccceeEeccCCCEEeCCccccCCCCeE
Confidence 9999998775554 45555323344458999999999999999876 45553 88888899999999999999999
Q ss_pred EecccCCC-CCchhHHHHHHHHHHHHHcC
Q 011787 351 AIGDVIPG-PMLAHKAEEDGVACVEFLAG 378 (477)
Q Consensus 351 a~GD~~~~-~~~~~~A~~~g~~aa~~i~~ 378 (477)
|+|||+.. |.+++.|..||+.||.||..
T Consensus 278 a~GD~~~~~~~~~~~A~~~g~~aa~~i~~ 306 (311)
T 2q0l_A 278 AAGDIRIFAPKQVVCAASDGATAALSVIS 306 (311)
T ss_dssp ECSTTBTTCCCCHHHHHHHHHHHHHHHHH
T ss_pred EcccccCcchHHHHHHHHhHHHHHHHHHH
Confidence 99999986 68999999999999999863
No 56
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=100.00 E-value=7.7e-38 Score=299.96 Aligned_cols=294 Identities=24% Similarity=0.333 Sum_probs=217.1
Q ss_pred CCCCCcEEEECCChHHHHHHHHHHHCCCeEEEEecCCCCCceeeccCccCchhhhhhhHHHHHHHhhhhhCCcccccccc
Q 011787 40 ASDENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSVEV 119 (477)
Q Consensus 40 ~~~~~dvvIIGgG~AGl~aA~~l~~~g~~V~lie~~~~~GG~~~~~~~~p~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~ 119 (477)
|+.++||+|||||+||+++|..|++.|++|+|+|+ ..+||.|.........+ ++ ...
T Consensus 13 m~~~~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~-~~~gg~~~~~~~~~~~~------------------~~----~~~ 69 (319)
T 3cty_A 13 KERDFDVVIVGAGAAGFSAAVYAARSGFSVAILDK-AVAGGLTAEAPLVENYL------------------GF----KSI 69 (319)
T ss_dssp -CCEEEEEEECCSHHHHHHHHHHHHTTCCEEEEES-SSTTGGGGGCSCBCCBT------------------TB----SSB
T ss_pred ccCCCcEEEECcCHHHHHHHHHHHhCCCcEEEEeC-CCCCccccccchhhhcC------------------CC----ccc
Confidence 44468999999999999999999999999999999 67888876544321100 00 001
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHHhhhCCeEEEEeEEEEec--CCEEEEEecCCceEEEEecEEEEccCCCCCCC--CCCc
Q 011787 120 DLPAMMAQKDKAVSNLTRGIEGLFKKNKVTYVKGYGKFIS--PSEVSVDTIEGGNTVVKGKNIIIATGSDVKSL--PGIT 195 (477)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~--~~~~~v~~~~g~~~~i~~d~lvlAtG~~~~~~--~g~~ 195 (477)
.... +...+...+++.+++++.+++..++ .+.+.|.+ ++ .++.||+||+|||+.|..+ |+..
T Consensus 70 ~~~~-----------~~~~~~~~~~~~~v~~~~~~v~~i~~~~~~~~v~~-~~--~~~~~~~li~AtG~~~~~~~i~g~~ 135 (319)
T 3cty_A 70 VGSE-----------LAKLFADHAANYAKIREGVEVRSIKKTQGGFDIET-ND--DTYHAKYVIITTGTTHKHLGVKGES 135 (319)
T ss_dssp CHHH-----------HHHHHHHHHHTTSEEEETCCEEEEEEETTEEEEEE-SS--SEEEEEEEEECCCEEECCCCCBTTT
T ss_pred CHHH-----------HHHHHHHHHHHcCCEEEEeeEEEEEEeCCEEEEEE-CC--CEEEeCEEEECCCCCcccCCCCChH
Confidence 1111 1222334556678888776666554 45556665 44 4789999999999987533 3332
Q ss_pred c-CCceEecchhhhcccCCCCeeEEEcccHHHHHHHHHHHHcCCcEEEEEeCCCcCCCCCHHHHHHHHHHHHhcCcEEEe
Q 011787 196 I-DEKRIVSSTGALALNEVPKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIVPSMDGEIRKQFQRSLEKQKMKFML 274 (477)
Q Consensus 196 ~-~~~~~~~~~~~~~~~~~~~~v~IiG~G~~g~e~a~~l~~~g~~Vtli~~~~~~~~~~~~~~~~~~~~~l~~~gv~~~~ 274 (477)
. ....+............+++++|||+|.+|+|+|..|++.|.+|+++++.+.+.. ++. +.+.+++.||++++
T Consensus 136 ~~~~~~~~~~~~~~~~~~~~~~v~viG~G~~g~e~a~~l~~~g~~V~~i~~~~~~~~--~~~----l~~~l~~~gv~i~~ 209 (319)
T 3cty_A 136 EYFGKGTSYCSTCDGYLFKGKRVVTIGGGNSGAIAAISMSEYVKNVTIIEYMPKYMC--ENA----YVQEIKKRNIPYIM 209 (319)
T ss_dssp TTBTTTEESCHHHHGGGGBTSEEEEECCSHHHHHHHHHHTTTBSEEEEECSSSSCCS--CHH----HHHHHHHTTCCEEC
T ss_pred HhCCceEEEEEecchhhcCCCeEEEECCCHHHHHHHHHHHhhCCcEEEEEcCCccCC--CHH----HHHHHhcCCcEEEc
Confidence 1 1123433333333334579999999999999999999999999999998876532 333 45556688999999
Q ss_pred CceEEEEEEcCCeE-EEEEeecCCCceEEEEcCEEEEeecCCCCCCCCCccccceeecCCCCeecCCCCCCCCCCeEEec
Q 011787 275 KTKVVGVDLSGDGV-KLTLEPAAGGEKTILEADVVLVSAGRTPFTAGLGLDKIGVETDKMGRIPVNERFATNIPGVYAIG 353 (477)
Q Consensus 275 ~~~v~~i~~~~~~~-~v~~~~~~~~~~~~i~~D~vi~a~G~~p~~~~l~~~~~gl~~~~~g~i~vd~~l~t~~~~vya~G 353 (477)
+++++++..+++++ .+.+....+++..++++|.||+|+|++||.++ +++.|++++++|+|.||++++|+.|+|||+|
T Consensus 210 ~~~v~~i~~~~~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~--l~~~gl~~~~~g~i~vd~~~~t~~~~vya~G 287 (319)
T 3cty_A 210 NAQVTEIVGDGKKVTGVKYKDRTTGEEKLIETDGVFIYVGLIPQTSF--LKDSGVKLDERGYIVVDSRQRTSVPGVYAAG 287 (319)
T ss_dssp SEEEEEEEESSSSEEEEEEEETTTCCEEEECCSEEEECCCEEECCGG--GTTSCCCBCTTSCBCCCTTCBCSSTTEEECS
T ss_pred CCeEEEEecCCceEEEEEEEEcCCCceEEEecCEEEEeeCCccChHH--HhhccccccCCccEeCCCCCccCCCCEEEee
Confidence 99999998765533 45554323344457999999999999999986 5677888888899999999999999999999
Q ss_pred ccCCC-CCchhHHHHHHHHHHHHHcC
Q 011787 354 DVIPG-PMLAHKAEEDGVACVEFLAG 378 (477)
Q Consensus 354 D~~~~-~~~~~~A~~~g~~aa~~i~~ 378 (477)
||+.. +.+++.|+.||+.||.+|..
T Consensus 288 D~~~~~~~~~~~A~~~g~~aa~~i~~ 313 (319)
T 3cty_A 288 DVTSGNFAQIASAVGDGCKAALSLYS 313 (319)
T ss_dssp TTBTTCCCCHHHHHHHHHHHHHHHHH
T ss_pred cccCcchhhHHHHHHHHHHHHHHHHH
Confidence 99976 57899999999999999964
No 57
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=100.00 E-value=1.2e-37 Score=297.45 Aligned_cols=290 Identities=26% Similarity=0.380 Sum_probs=218.2
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCeEEEEecCCCCCceeeccCccCchhhhhhhHHHHHHHhhhhhCCccccccccChH
Q 011787 43 ENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSVEVDLP 122 (477)
Q Consensus 43 ~~dvvIIGgG~AGl~aA~~l~~~g~~V~lie~~~~~GG~~~~~~~~p~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 122 (477)
++||+||||||||+++|..|++.|++|+|||+ .+||+|.....++... +.. ..+..
T Consensus 1 ~~dvvIIG~G~aGl~aA~~l~~~g~~v~li~~--~~gG~~~~~~~~~~~~------------------~~~----~~~~~ 56 (310)
T 1fl2_A 1 AYDVLIVGSGPAGAAAAIYSARKGIRTGLMGE--RFGGQILDTVDIENYI------------------SVP----KTEGQ 56 (310)
T ss_dssp CEEEEEECCSHHHHHHHHHHHTTTCCEEEECS--STTGGGGGCCEECCBT------------------TBS----SEEHH
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCcEEEEeC--CCCceecccccccccc------------------CcC----CCCHH
Confidence 37999999999999999999999999999986 5788876543222100 000 01111
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhCCeEEEEe-EEEEecCC-----EEEEEecCCceEEEEecEEEEccCCCCCC--CCCC
Q 011787 123 AMMAQKDKAVSNLTRGIEGLFKKNKVTYVKG-YGKFISPS-----EVSVDTIEGGNTVVKGKNIIIATGSDVKS--LPGI 194 (477)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-~~~~~~~~-----~~~v~~~~g~~~~i~~d~lvlAtG~~~~~--~~g~ 194 (477)
.+...+...+++.+++++.+ ++..++.. .+.+.+.+| ..+.||+||+|||+.|.. +|+.
T Consensus 57 -----------~~~~~~~~~~~~~~v~~~~~~~v~~i~~~~~~~~~~~v~~~~g--~~~~~~~lv~AtG~~~~~~~~~g~ 123 (310)
T 1fl2_A 57 -----------KLAGALKVHVDEYDVDVIDSQSASKLIPAAVEGGLHQIETASG--AVLKARSIIVATGAKWRNMNVPGE 123 (310)
T ss_dssp -----------HHHHHHHHHHHTSCEEEECSCCEEEEECCSSTTCCEEEEETTS--CEEEEEEEEECCCEEECCCCCTTT
T ss_pred -----------HHHHHHHHHHHHcCCeEEccCEEEEEEecccCCceEEEEECCC--CEEEeCEEEECcCCCcCCCCCCCh
Confidence 12233445566779999988 77777543 577777777 679999999999998743 4444
Q ss_pred cc-CCceEecchhhhcccCCCCeeEEEcccHHHHHHHHHHHHcCCcEEEEEeCCCcCCCCCHHHHHHHHHHHHh-cCcEE
Q 011787 195 TI-DEKRIVSSTGALALNEVPKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIVPSMDGEIRKQFQRSLEK-QKMKF 272 (477)
Q Consensus 195 ~~-~~~~~~~~~~~~~~~~~~~~v~IiG~G~~g~e~a~~l~~~g~~Vtli~~~~~~~~~~~~~~~~~~~~~l~~-~gv~~ 272 (477)
.. ....+++..........+++++|||+|++|+|+|..|++.+.+|+++++.+.+. +++ .+.+.+++ .||++
T Consensus 124 ~~~~~~~~~~~~~~~~~~~~~~~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~--~~~----~~~~~l~~~~gv~v 197 (310)
T 1fl2_A 124 DQYRTKGVTYCPHCDGPLFKGKRVAVIGGGNSGVEAAIDLAGIVEHVTLLEFAPEMK--ADQ----VLQDKLRSLKNVDI 197 (310)
T ss_dssp TTTBTTTEESCHHHHGGGGBTCEEEEECCSHHHHHHHHHHHTTBSEEEEECSSSSCC--SCH----HHHHHHHTCTTEEE
T ss_pred hhcccceeEEeccCcHhhcCCCEEEEECCCHHHHHHHHHHHHhCCEEEEEEeCcccC--ccH----HHHHHHhhCCCeEE
Confidence 31 123344444433333458999999999999999999999999999999988762 343 34555666 69999
Q ss_pred EeCceEEEEEEcCCeE-EEEEeecCCCceEEEEcCEEEEeecCCCCCCCCCccccceeecCCCCeecCCCCCCCCCCeEE
Q 011787 273 MLKTKVVGVDLSGDGV-KLTLEPAAGGEKTILEADVVLVSAGRTPFTAGLGLDKIGVETDKMGRIPVNERFATNIPGVYA 351 (477)
Q Consensus 273 ~~~~~v~~i~~~~~~~-~v~~~~~~~~~~~~i~~D~vi~a~G~~p~~~~l~~~~~gl~~~~~g~i~vd~~l~t~~~~vya 351 (477)
+++++++++..+++++ .+++.+..+++..++++|.|++|+|++||.++ +++. +.++++|+|.||+++||+.|+|||
T Consensus 198 ~~~~~v~~i~~~~~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~--l~~~-l~~~~~g~i~vd~~~~t~~~~vya 274 (310)
T 1fl2_A 198 ILNAQTTEVKGDGSKVVGLEYRDRVSGDIHNIELAGIFVQIGLLPNTNW--LEGA-VERNRMGEIIIDAKCETNVKGVFA 274 (310)
T ss_dssp ESSEEEEEEEESSSSEEEEEEEETTTCCEEEEECSEEEECSCEEESCGG--GTTT-SCBCTTSCBCCCTTCBCSSTTEEE
T ss_pred ecCCceEEEEcCCCcEEEEEEEECCCCcEEEEEcCEEEEeeCCccCchH--Hhcc-ccccCCCcEEcCCCCccCCCCEEE
Confidence 9999999998766555 46665433445568999999999999999876 3443 777888999999999999999999
Q ss_pred ecccCCCC-CchhHHHHHHHHHHHHHcC
Q 011787 352 IGDVIPGP-MLAHKAEEDGVACVEFLAG 378 (477)
Q Consensus 352 ~GD~~~~~-~~~~~A~~~g~~aa~~i~~ 378 (477)
+|||+..+ ..+..|+.||+.||.+|..
T Consensus 275 ~GD~~~~~~~~~~~A~~~g~~aa~~i~~ 302 (310)
T 1fl2_A 275 AGDCTTVPYKQIIIATGEGAKASLSAFD 302 (310)
T ss_dssp CSTTBSCSSCCHHHHHHHHHHHHHHHHH
T ss_pred eecccCCcchhhhhhHhhHHHHHHHHHH
Confidence 99999875 5789999999999999964
No 58
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=100.00 E-value=5.3e-38 Score=300.41 Aligned_cols=296 Identities=20% Similarity=0.219 Sum_probs=222.9
Q ss_pred CCCcEEEECCChHHHHHHHHHHHCCCeEEE-EecCCCCCceeeccCccCchhhhhhhHHHHHHHhhhhhCCccccccccC
Q 011787 42 DENDVVVIGGGPGGYVAAIKAAQLGLKTTC-IEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSVEVD 120 (477)
Q Consensus 42 ~~~dvvIIGgG~AGl~aA~~l~~~g~~V~l-ie~~~~~GG~~~~~~~~p~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~~ 120 (477)
.++||+|||||+||++||..|++.|++|+| +|+ +.+||.|.+..+.+..+. .. ....
T Consensus 3 ~~~~vvIIG~G~aGl~aA~~l~~~g~~v~li~e~-~~~gG~~~~~~~~~~~~~------------------~~---~~~~ 60 (315)
T 3r9u_A 3 AMLDVAIIGGGPAGLSAGLYATRGGLKNVVMFEK-GMPGGQITSSSEIENYPG------------------VA---QVMD 60 (315)
T ss_dssp SCEEEEEECCSHHHHHHHHHHHHHTCSCEEEECS-SSTTGGGGGCSCBCCSTT------------------CC---SCBC
T ss_pred CCceEEEECCCHHHHHHHHHHHHCCCCeEEEEeC-CCCCceeeeeceeccCCC------------------CC---CCCC
Confidence 458999999999999999999999999999 999 788998876544322110 00 0111
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhhhCCeEEEEeEEEEe-cC--CEEEEEecCCceEEEEecEEEEccCCCCCC--CCCCc
Q 011787 121 LPAMMAQKDKAVSNLTRGIEGLFKKNKVTYVKGYGKFI-SP--SEVSVDTIEGGNTVVKGKNIIIATGSDVKS--LPGIT 195 (477)
Q Consensus 121 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~~--~~~~v~~~~g~~~~i~~d~lvlAtG~~~~~--~~g~~ 195 (477)
. ..+..++...+++.+++++.+++..+ +. ..+.+....+. ++.||+||+|||+.|.. +|+..
T Consensus 61 ~-----------~~~~~~~~~~~~~~~v~~~~~~v~~i~~~~~~~~~v~~~~~~--~~~~d~lvlAtG~~~~~~~~~g~~ 127 (315)
T 3r9u_A 61 G-----------ISFMAPWSEQCMRFGLKHEMVGVEQILKNSDGSFTIKLEGGK--TELAKAVIVCTGSAPKKAGFKGED 127 (315)
T ss_dssp H-----------HHHHHHHHHHHTTTCCEEECCCEEEEEECTTSCEEEEETTSC--EEEEEEEEECCCEEECCCCCBTTT
T ss_pred H-----------HHHHHHHHHHHHHcCcEEEEEEEEEEecCCCCcEEEEEecCC--EEEeCEEEEeeCCCCCCCCCCChh
Confidence 1 12233344566777899888877666 44 44664233332 89999999999998743 44443
Q ss_pred c-CCceEecchhhhcccCCCCeeEEEcccHHHHHHHHHHHHcCCcEEEEEeCCCcCCCCCHHHHHHHHHHHHhcCcEEEe
Q 011787 196 I-DEKRIVSSTGALALNEVPKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIVPSMDGEIRKQFQRSLEKQKMKFML 274 (477)
Q Consensus 196 ~-~~~~~~~~~~~~~~~~~~~~v~IiG~G~~g~e~a~~l~~~g~~Vtli~~~~~~~~~~~~~~~~~~~~~l~~~gv~~~~ 274 (477)
. ....+++..........+++++|+|+|.+++|+|..|.+.+.+|+++++.+.+. .+++. +.+.+++.||++++
T Consensus 128 ~~~~~~~~~~~~~~~~~~~~~~v~viG~g~~~~e~a~~l~~~g~~v~~~~~~~~~~--~~~~~---~~~~~~~~gv~~~~ 202 (315)
T 3r9u_A 128 EFFGKGVSTCATCDGFFYKNKEVAVLGGGDTALEEALYLANICSKIYLIHRRDEFR--AAPST---VEKVKKNEKIELIT 202 (315)
T ss_dssp TTBTTTEESCHHHHGGGGTTSEEEEECCBHHHHHHHHHHHTTSSEEEEECSSSSCB--SCHHH---HHHHHHCTTEEEEC
T ss_pred hcCCCeEEeeecccccccCcCEEEEECCCHHHHHHHHHHHhhCCEEEEEEeCCCCC--CCHHH---HHHHHhcCCeEEEe
Confidence 1 224555555555555668999999999999999999999999999999988762 23333 34555788999999
Q ss_pred CceEEEEEEcCCeEE-EEEeecCCCceEEEEcCEEEEeecCCCCCCCCCc-cccc-eeecCCCCeecCCCCCCCCCCeEE
Q 011787 275 KTKVVGVDLSGDGVK-LTLEPAAGGEKTILEADVVLVSAGRTPFTAGLGL-DKIG-VETDKMGRIPVNERFATNIPGVYA 351 (477)
Q Consensus 275 ~~~v~~i~~~~~~~~-v~~~~~~~~~~~~i~~D~vi~a~G~~p~~~~l~~-~~~g-l~~~~~g~i~vd~~l~t~~~~vya 351 (477)
++.+.++..+++++. +++. ..+++..++++|.|++|+|++|+...+.. +.+| +.++++|+|.||+++||+.|+|||
T Consensus 203 ~~~v~~i~~~~~~~~~v~~~-~~~g~~~~~~~D~vv~a~G~~p~~~~~~~~~~~g~l~~~~~g~i~vd~~~~t~~~~v~a 281 (315)
T 3r9u_A 203 SASVDEVYGDKMGVAGVKVK-LKDGSIRDLNVPGIFTFVGLNVRNEILKQDDSKFLCNMEEGGQVSVDLKMQTSVAGLFA 281 (315)
T ss_dssp SCEEEEEEEETTEEEEEEEE-CTTSCEEEECCSCEEECSCEEECCGGGBCTTSCBSSCBCTTSCBCCCTTCBCSSTTEEE
T ss_pred CcEEEEEEcCCCcEEEEEEE-cCCCCeEEeecCeEEEEEcCCCCchhhhcccccceeeecCCCcEEeCCCcccCCCCEEE
Confidence 999999988775543 5554 23344458999999999999999986432 3465 888989999999999999999999
Q ss_pred ecccCC-CCCchhHHHHHHHHHHHHHcC
Q 011787 352 IGDVIP-GPMLAHKAEEDGVACVEFLAG 378 (477)
Q Consensus 352 ~GD~~~-~~~~~~~A~~~g~~aa~~i~~ 378 (477)
+|||++ .|..+..|+.||+.||.+|..
T Consensus 282 ~GD~~~~~~~~~~~A~~~g~~aa~~i~~ 309 (315)
T 3r9u_A 282 AGDLRKDAPKQVICAAGDGAVAALSAMA 309 (315)
T ss_dssp CGGGBTTCCCCHHHHHHHHHHHHHHHHH
T ss_pred eecccCCchhhhhhHHhhHHHHHHHHHH
Confidence 999985 577999999999999999863
No 59
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=100.00 E-value=5.5e-39 Score=324.30 Aligned_cols=298 Identities=20% Similarity=0.262 Sum_probs=215.2
Q ss_pred CCCCCcEEEECCChHHHHHHHHHHHCCCeEEEEecCCCCCceeeccCccCchhhhhhhHHHHHHHhhhhhCCcccccccc
Q 011787 40 ASDENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSVEV 119 (477)
Q Consensus 40 ~~~~~dvvIIGgG~AGl~aA~~l~~~g~~V~lie~~~~~GG~~~~~~~~p~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~ 119 (477)
.+.+.+|||||||+||+++|.+|++.+++|+|||+++.. .+. +++ ++.....+.+.....
T Consensus 39 ~~~KprVVIIGgG~AGl~~A~~L~~~~~~VtLId~~~~~----~~~------PlL----------~~va~G~l~~~~i~~ 98 (502)
T 4g6h_A 39 HSDKPNVLILGSGWGAISFLKHIDTKKYNVSIISPRSYF----LFT------PLL----------PSAPVGTVDEKSIIE 98 (502)
T ss_dssp SCSSCEEEEECSSHHHHHHHHHSCTTTCEEEEEESSSEE----ECG------GGG----------GGTTTTSSCGGGGEE
T ss_pred CCCCCCEEEECCcHHHHHHHHHhhhCCCcEEEECCCCCc----ccc------cch----------hHHhhccccHHHhhh
Confidence 345679999999999999999999999999999996431 111 111 111111122211111
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHHhhhCCeEEEEeEEEEecCCEEEEEec------------------CCceEEEEecEEE
Q 011787 120 DLPAMMAQKDKAVSNLTRGIEGLFKKNKVTYVKGYGKFISPSEVSVDTI------------------EGGNTVVKGKNII 181 (477)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~v~~~------------------~g~~~~i~~d~lv 181 (477)
+...+ ....+.+++++.+++..+|.+..+|.+. .+...++.||+||
T Consensus 99 p~~~~----------------~~~~~~~v~~~~~~v~~ID~~~k~V~l~~~~~~~~~~~~~~~~~~~~~~~~~i~YD~LV 162 (502)
T 4g6h_A 99 PIVNF----------------ALKKKGNVTYYEAEATSINPDRNTVTIKSLSAVSQLYQPENHLGLHQAEPAEIKYDYLI 162 (502)
T ss_dssp EHHHH----------------HTTCSSCEEEEEEEEEEEEGGGTEEEEEEEEEEEECSSSCCCCCCCTTCCEEEECSEEE
T ss_pred hHHHH----------------HHhhcCCeEEEEEEEEEEEhhhCEEEEeecccceeecccccccccccCCceEEeCCEEE
Confidence 11110 1123457999999999988765544432 1234789999999
Q ss_pred EccCCCCC--CCCCCccCCceEecchhhhccc-------------C-------CCCeeEEEcccHHHHHHHHHHHHc---
Q 011787 182 IATGSDVK--SLPGITIDEKRIVSSTGALALN-------------E-------VPKKLVVIGAGYIGLEMGSVWARL--- 236 (477)
Q Consensus 182 lAtG~~~~--~~~g~~~~~~~~~~~~~~~~~~-------------~-------~~~~v~IiG~G~~g~e~a~~l~~~--- 236 (477)
||||++|. .+||+......+.+..++..++ . ...+++|||||++|+|+|..|++.
T Consensus 163 iAtGs~~~~~~ipG~~e~a~~l~t~~dA~~ir~~l~~~~e~a~~~~~~~~~~~~~~~vvVvGgG~tGvE~A~~l~~~~~~ 242 (502)
T 4g6h_A 163 SAVGAEPNTFGIPGVTDYGHFLKEIPNSLEIRRTFAANLEKANLLPKGDPERRRLLSIVVVGGGPTGVEAAGELQDYVHQ 242 (502)
T ss_dssp ECCCCEECCTTCTTHHHHCEECSSHHHHHHHHHHHHHHHHHHHHSCTTCHHHHHHTEEEEECCSHHHHHHHHHHHHHHHH
T ss_pred EcCCcccccCCccCcccccCCCCCHHHHHHHHHHHHHHHHHHhcccccchhhccccceEEECCCcchhhhHHHHHHHHHH
Confidence 99999885 4566543333444444443221 0 124799999999999999988754
Q ss_pred -----------CCcEEEEEeCCCcCCCCCHHHHHHHHHHHHhcCcEEEeCceEEEEEEcCCeEEEEEeecCCC--ceEEE
Q 011787 237 -----------GSEVTVVEFAADIVPSMDGEIRKQFQRSLEKQKMKFMLKTKVVGVDLSGDGVKLTLEPAAGG--EKTIL 303 (477)
Q Consensus 237 -----------g~~Vtli~~~~~~~~~~~~~~~~~~~~~l~~~gv~~~~~~~v~~i~~~~~~~~v~~~~~~~~--~~~~i 303 (477)
..+|+++++.+++++.+++++.+.+++.|+++||+++++++|++++ ++.+.+.... .++ .++++
T Consensus 243 ~l~~~~~~~~~~~~V~lve~~~~il~~~~~~~~~~~~~~L~~~GV~v~~~~~v~~v~--~~~~~~~~~~-~dg~~~~~~i 319 (502)
T 4g6h_A 243 DLRKFLPALAEEVQIHLVEALPIVLNMFEKKLSSYAQSHLENTSIKVHLRTAVAKVE--EKQLLAKTKH-EDGKITEETI 319 (502)
T ss_dssp THHHHCHHHHHHCEEEEECSSSSSSTTSCHHHHHHHHHHHHHTTCEEETTEEEEEEC--SSEEEEEEEC-TTSCEEEEEE
T ss_pred HHHhhcccccccceeEEeccccccccCCCHHHHHHHHHHHHhcceeeecCceEEEEe--CCceEEEEEe-cCcccceeee
Confidence 2579999999999999999999999999999999999999999994 4455444321 112 23579
Q ss_pred EcCEEEEeecCCCCCC--CCCccccceeecCCCCeecCCCCCC-CCCCeEEecccCC--CCCchhHHHHHHHHHHHHHc
Q 011787 304 EADVVLVSAGRTPFTA--GLGLDKIGVETDKMGRIPVNERFAT-NIPGVYAIGDVIP--GPMLAHKAEEDGVACVEFLA 377 (477)
Q Consensus 304 ~~D~vi~a~G~~p~~~--~l~~~~~gl~~~~~g~i~vd~~l~t-~~~~vya~GD~~~--~~~~~~~A~~~g~~aa~~i~ 377 (477)
++|.||||+|.+||.. .+ ....+...+.+|+|.||++||+ ++|||||+|||+. .|++++.|.+||+++|+||.
T Consensus 320 ~ad~viwa~Gv~~~~~~~~l-~~~~~~~~~~~g~I~Vd~~lq~~~~~~IfAiGD~a~~~~p~~a~~A~qqg~~~A~ni~ 397 (502)
T 4g6h_A 320 PYGTLIWATGNKARPVITDL-FKKIPEQNSSKRGLAVNDFLQVKGSNNIFAIGDNAFAGLPPTAQVAHQEAEYLAKNFD 397 (502)
T ss_dssp ECSEEEECCCEECCHHHHHH-HHHSGGGTTCCSSEEBCTTSBBTTCSSEEECGGGEESSSCCCHHHHHHHHHHHHHHHH
T ss_pred ccCEEEEccCCcCCHHHHhH-HHhccccccCCCceeECCccccCCCCCEEEEEcccCCCCCCchHHHHHHHHHHHHHHH
Confidence 9999999999999842 11 2344666677899999999997 8999999999984 56799999999999999995
No 60
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=100.00 E-value=2.9e-38 Score=305.03 Aligned_cols=300 Identities=21% Similarity=0.297 Sum_probs=220.1
Q ss_pred CCCCCcEEEECCChHHHHHHHHHHHCCCeEEEEecCCCCCceeeccCccCchhhhhhhHHHHHHHhhhhhCCcccccccc
Q 011787 40 ASDENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSVEV 119 (477)
Q Consensus 40 ~~~~~dvvIIGgG~AGl~aA~~l~~~g~~V~lie~~~~~GG~~~~~~~~p~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~ 119 (477)
|+.++||+|||||+||+++|..|++.|++|+|||+++.+||+|.+. .|++.+... .++. .+
T Consensus 2 ~~~~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~gg~~~~~--~~~~~~~~~-------------~~~~----~~ 62 (335)
T 2zbw_A 2 AADHTDVLIVGAGPTGLFAGFYVGMRGLSFRFVDPLPEPGGQLTAL--YPEKYIYDV-------------AGFP----KV 62 (335)
T ss_dssp -CCEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSCHHHHHT--CTTSEECCS-------------TTCS----SE
T ss_pred CCCcCcEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCCCCCeeecc--CCCceeecc-------------CCCC----CC
Confidence 3456899999999999999999999999999999998999987542 232211100 0000 11
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHHhhhCCeEEEEe-EEEEec--CCEEEEEecCCceEEEEecEEEEccCCC---CC--CC
Q 011787 120 DLPAMMAQKDKAVSNLTRGIEGLFKKNKVTYVKG-YGKFIS--PSEVSVDTIEGGNTVVKGKNIIIATGSD---VK--SL 191 (477)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-~~~~~~--~~~~~v~~~~g~~~~i~~d~lvlAtG~~---~~--~~ 191 (477)
.... +...+...+.+.+++++.+ .+..++ .+.+.+.+.++ .++.||+||+|||+. |. .+
T Consensus 63 ~~~~-----------~~~~l~~~~~~~~~~~~~~~~v~~i~~~~~~~~v~~~~g--~~~~~~~lv~AtG~~~~~p~~~~i 129 (335)
T 2zbw_A 63 YAKD-----------LVKGLVEQVAPFNPVYSLGERAETLEREGDLFKVTTSQG--NAYTAKAVIIAAGVGAFEPRRIGA 129 (335)
T ss_dssp EHHH-----------HHHHHHHHHGGGCCEEEESCCEEEEEEETTEEEEEETTS--CEEEEEEEEECCTTSEEEECCCCC
T ss_pred CHHH-----------HHHHHHHHHHHcCCEEEeCCEEEEEEECCCEEEEEECCC--CEEEeCEEEECCCCCCCCCCCCCC
Confidence 1111 2222334445567777655 455443 23677777776 679999999999994 43 23
Q ss_pred CCCcc-CCceEec-chhhhcccCCCCeeEEEcccHHHHHHHHHHHHcCCcEEEEEeCCCcCCCCCHHHHHHHHHHHHhcC
Q 011787 192 PGITI-DEKRIVS-STGALALNEVPKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIVPSMDGEIRKQFQRSLEKQK 269 (477)
Q Consensus 192 ~g~~~-~~~~~~~-~~~~~~~~~~~~~v~IiG~G~~g~e~a~~l~~~g~~Vtli~~~~~~~~~~~~~~~~~~~~~l~~~g 269 (477)
|+... ....+++ ..+.. ...+++++|||+|.+|+|+|..|++.|.+|+++++.+.+.+ .++..+.+.+.+++.|
T Consensus 130 ~g~~~~~~~~~~~~~~~~~--~~~~~~v~viG~G~~g~e~a~~l~~~g~~V~~v~~~~~~~~--~~~~~~~l~~~l~~~g 205 (335)
T 2zbw_A 130 PGEREFEGRGVYYAVKSKA--EFQGKRVLIVGGGDSAVDWALNLLDTARRITLIHRRPQFRA--HEASVKELMKAHEEGR 205 (335)
T ss_dssp TTTTTTBTTTEESSCSCGG--GGTTCEEEEECSSHHHHHHHHHTTTTSSEEEEECSSSSCCS--CHHHHHHHHHHHHTTS
T ss_pred CChhhccCcEEEEecCchh--hcCCCEEEEECCCHHHHHHHHHHHhhCCEEEEEEcCCccCc--cHHHHHHHHhccccCC
Confidence 44321 1122322 12211 12479999999999999999999999999999999887654 3567788888899999
Q ss_pred cEEEeCceEEEEEEcCCeEEEEEeecCCCceEEEEcCEEEEeecCCCCCCCCCccccceeecCCCCeecCCCCCCCCCCe
Q 011787 270 MKFMLKTKVVGVDLSGDGVKLTLEPAAGGEKTILEADVVLVSAGRTPFTAGLGLDKIGVETDKMGRIPVNERFATNIPGV 349 (477)
Q Consensus 270 v~~~~~~~v~~i~~~~~~~~v~~~~~~~~~~~~i~~D~vi~a~G~~p~~~~l~~~~~gl~~~~~g~i~vd~~l~t~~~~v 349 (477)
|++++++.+.+++.+++...+.+....+++..++++|.|++|+|++|+.++ +++.++..+ +|++.||+++||+.|+|
T Consensus 206 v~v~~~~~v~~i~~~~~~~~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~--l~~~~~~~~-~g~i~vd~~~~t~~~~v 282 (335)
T 2zbw_A 206 LEVLTPYELRRVEGDERVRWAVVFHNQTQEELALEVDAVLILAGYITKLGP--LANWGLALE-KNKIKVDTTMATSIPGV 282 (335)
T ss_dssp SEEETTEEEEEEEESSSEEEEEEEETTTCCEEEEECSEEEECCCEEEECGG--GGGSCCCEE-TTEEECCTTCBCSSTTE
T ss_pred eEEecCCcceeEccCCCeeEEEEEECCCCceEEEecCEEEEeecCCCCchH--hhhcceecc-CCeeeeCCCCCCCCCCE
Confidence 999999999999875443346655332344578999999999999999875 677788877 68999999999999999
Q ss_pred EEecccCC---CCCchhHHHHHHHHHHHHHcC
Q 011787 350 YAIGDVIP---GPMLAHKAEEDGVACVEFLAG 378 (477)
Q Consensus 350 ya~GD~~~---~~~~~~~A~~~g~~aa~~i~~ 378 (477)
||+|||+. .+.++..|..||+.||+||.+
T Consensus 283 ya~GD~~~~~~~~~~~~~A~~~g~~aa~~i~~ 314 (335)
T 2zbw_A 283 YACGDIVTYPGKLPLIVLGFGEAAIAANHAAA 314 (335)
T ss_dssp EECSTTEECTTCCCCHHHHHHHHHHHHHHHHH
T ss_pred EEeccccccCcchhhhhhhHHHHHHHHHHHHH
Confidence 99999994 457899999999999999974
No 61
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=100.00 E-value=3.2e-38 Score=300.35 Aligned_cols=284 Identities=15% Similarity=0.194 Sum_probs=202.7
Q ss_pred CCCCCcEEEECCChHHHHHHHHHHHCCCeEEEEecCCCCCceee-ccCccCchhhhhhhHHHHHHHhhhhhCCccccccc
Q 011787 40 ASDENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGALGGTCL-NVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSVE 118 (477)
Q Consensus 40 ~~~~~dvvIIGgG~AGl~aA~~l~~~g~~V~lie~~~~~GG~~~-~~~~~p~~~l~~~~~~~~~~~~~~~~~g~~~~~~~ 118 (477)
.|++|||+||||||||++||.+|++.|++|+|||++ ..||.+. +...++... .
T Consensus 3 ~M~~yDVvIIGaGpAGlsAA~~lar~g~~v~lie~~-~~gg~~~~~~~~~~~~~-------------------------~ 56 (304)
T 4fk1_A 3 AMKYIDCAVIGAGPAGLNASLVLGRARKQIALFDNN-TNRNRVTQNSHGFITRD-------------------------G 56 (304)
T ss_dssp ---CEEEEEECCSHHHHHHHHHHHHTTCCEEEEECS-CCGGGGSSCBCCSTTCT-------------------------T
T ss_pred CCCCcCEEEECCCHHHHHHHHHHHHCCCCEEEEeCC-CCCCeeeeecCCccCCC-------------------------C
Confidence 567799999999999999999999999999999995 5566432 111111100 1
Q ss_pred cChHHHHHHHHHHHHHHHHHHHHHhhhCCeEEEEeEEEEe---cCCEEEEEecCCceEEEEecEEEEccCCCCCC--CCC
Q 011787 119 VDLPAMMAQKDKAVSNLTRGIEGLFKKNKVTYVKGYGKFI---SPSEVSVDTIEGGNTVVKGKNIIIATGSDVKS--LPG 193 (477)
Q Consensus 119 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~---~~~~~~v~~~~g~~~~i~~d~lvlAtG~~~~~--~~g 193 (477)
....++... ...+..+...+.+..+.+..+ +...+.+.+.+| .++.||+||||||++|+. +|+
T Consensus 57 ~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g--~~~~a~~liiATGs~p~~p~i~G 124 (304)
T 4fk1_A 57 IKPEEFKEI----------GLNEVMKYPSVHYYEKTVVMITKQSTGLFEIVTKDH--TKYLAERVLLATGMQEEFPSIPN 124 (304)
T ss_dssp BCHHHHHHH----------HHHHHTTSTTEEEEECCEEEEEECTTSCEEEEETTC--CEEEEEEEEECCCCEEECCSCTT
T ss_pred CCHHHHHHH----------HHHHHHhcCCEEEEeeEEEEeeecCCCcEEEEECCC--CEEEeCEEEEccCCccccccccC
Confidence 111111111 011222334566766655443 455677888887 789999999999999854 444
Q ss_pred Cc-cCCceEecchhhhcccCCCCeeEEEcccH-HHHHHHHHHHHcCCcEEEEEeCCCcCCCCCHHHHHHHHHHHHhcCcE
Q 011787 194 IT-IDEKRIVSSTGALALNEVPKKLVVIGAGY-IGLEMGSVWARLGSEVTVVEFAADIVPSMDGEIRKQFQRSLEKQKMK 271 (477)
Q Consensus 194 ~~-~~~~~~~~~~~~~~~~~~~~~v~IiG~G~-~g~e~a~~l~~~g~~Vtli~~~~~~~~~~~~~~~~~~~~~l~~~gv~ 271 (477)
.. .....+++..........+++++|||||. .++|+|..+.+.+.+|+++.+.+.+. +.+.+.|+++|+.
T Consensus 125 ~~~~~~~~v~~~~~~~~~~~~~~~~~VIggG~~~~~e~a~~~~~~~~~v~i~~~~~~~~--------~~~~~~l~~~g~~ 196 (304)
T 4fk1_A 125 VREYYGKSLFSCPYCDGWELKDQPLIIISENEDHTLHMTKLVYNWSTDLVIATNGNELS--------QTIMDELSNKNIP 196 (304)
T ss_dssp HHHHBTTTEESCHHHHSGGGTTSCEEEECCSHHHHHHHHHHHTTTCSCEEEECSSCCCC--------HHHHHHHHTTTCC
T ss_pred ccccccceeeeccccchhHhcCCceeeecCCCchhhhHHHHHHhCCceEEEEeccccch--------hhhhhhhhcccee
Confidence 33 22345666555555555677788887775 56889999999999999998766432 3456678889999
Q ss_pred EEeCceEEEEEEcCCeEE-EEEeecCCCceEEEEcCEEEEeecCCCCCCCCCccccceeecCCCCeecCCCCCCCCCCeE
Q 011787 272 FMLKTKVVGVDLSGDGVK-LTLEPAAGGEKTILEADVVLVSAGRTPFTAGLGLDKIGVETDKMGRIPVNERFATNIPGVY 350 (477)
Q Consensus 272 ~~~~~~v~~i~~~~~~~~-v~~~~~~~~~~~~i~~D~vi~a~G~~p~~~~l~~~~~gl~~~~~g~i~vd~~l~t~~~~vy 350 (477)
++.+ .+..+..+++.+. +++. +++++++|.++++.|.+|+... ++++|++++++|+|.||+++|||+||||
T Consensus 197 ~~~~-~v~~~~~~~~~~~~v~~~-----~g~~i~~~~~vi~~g~~~~~~~--~~~~g~~~~~~G~I~vd~~~~Ts~p~Iy 268 (304)
T 4fk1_A 197 VITE-SIRTLQGEGGYLKKVEFH-----SGLRIERAGGFIVPTFFRPNQF--IEQLGCELQSNGTFVIDDFGRTSEKNIY 268 (304)
T ss_dssp EECS-CEEEEESGGGCCCEEEET-----TSCEECCCEEEECCEEECSSCH--HHHTTCCCCTTSSSCSSTTCBCSSTTEE
T ss_pred Eeee-eEEEeecCCCeeeeeecc-----ccceeeecceeeeeccccCChh--hhhcCeEECCCCCEEECcCCccCCCCEE
Confidence 9876 4777776655443 5554 6678999988888877776664 7888999999999999999999999999
Q ss_pred EecccCC-CCCchhHHHHHHHHHHHHHc
Q 011787 351 AIGDVIP-GPMLAHKAEEDGVACVEFLA 377 (477)
Q Consensus 351 a~GD~~~-~~~~~~~A~~~g~~aa~~i~ 377 (477)
|+|||++ .+.++..|+.||+.||..|.
T Consensus 269 A~GDv~~~~~~~~~~A~~~G~~AA~~i~ 296 (304)
T 4fk1_A 269 LAGETTTQGPSSLIIAASQGNKAAIAIN 296 (304)
T ss_dssp ECSHHHHTSCCCHHHHHHHHHHHHHHHH
T ss_pred EEeccCCCcchHHHHHHHHHHHHHHHHH
Confidence 9999995 45678899999999998874
No 62
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=100.00 E-value=7.7e-38 Score=302.37 Aligned_cols=296 Identities=24% Similarity=0.238 Sum_probs=219.5
Q ss_pred CCCCCcEEEECCChHHHHHHHHHHHCCCeEEEEecC----CCCCceeeccCccCchhhhhhhHHHHHHHhhhhhCCcccc
Q 011787 40 ASDENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKR----GALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFS 115 (477)
Q Consensus 40 ~~~~~dvvIIGgG~AGl~aA~~l~~~g~~V~lie~~----~~~GG~~~~~~~~p~~~l~~~~~~~~~~~~~~~~~g~~~~ 115 (477)
+..++||+|||||+||+++|..|++.|++|+|||+. ..+||.|.......... ++..
T Consensus 19 ~~~~~~vvIIG~G~aGl~aA~~l~~~g~~v~vie~~~~~~~~~gg~~~~~~~~~~~~------------------~~~~- 79 (338)
T 3itj_A 19 SHVHNKVTIIGSGPAAHTAAIYLARAEIKPILYEGMMANGIAAGGQLTTTTEIENFP------------------GFPD- 79 (338)
T ss_dssp --CEEEEEEECCSHHHHHHHHHHHHTTCCCEEECCSSBTTBCTTCGGGGSSEECCST------------------TCTT-
T ss_pred CCCCCCEEEECcCHHHHHHHHHHHHCCCCEEEEecCCCCCCCcCcccccchhhcccC------------------CCcc-
Confidence 345689999999999999999999999999999994 47888765433111000 0000
Q ss_pred ccccChHHHHHHHHHHHHHHHHHHHHHhhhCCeEEEEeEEEEecC--CEEEEEec---CCceEEEEecEEEEccCCCCCC
Q 011787 116 SVEVDLPAMMAQKDKAVSNLTRGIEGLFKKNKVTYVKGYGKFISP--SEVSVDTI---EGGNTVVKGKNIIIATGSDVKS 190 (477)
Q Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~--~~~~v~~~---~g~~~~i~~d~lvlAtG~~~~~ 190 (477)
.... ..+...+...+.+.+++++.+++..++. ..+.+.+. ++ ..+.||+||+|||+.|..
T Consensus 80 --~~~~-----------~~~~~~~~~~~~~~gv~i~~~~v~~i~~~~~~~~v~~~~~~~~--~~~~~d~vvlAtG~~~~~ 144 (338)
T 3itj_A 80 --GLTG-----------SELMDRMREQSTKFGTEIITETVSKVDLSSKPFKLWTEFNEDA--EPVTTDAIILATGASAKR 144 (338)
T ss_dssp --CEEH-----------HHHHHHHHHHHHHTTCEEECSCEEEEECSSSSEEEEETTCSSS--CCEEEEEEEECCCEEECC
T ss_pred --cCCH-----------HHHHHHHHHHHHHcCCEEEEeEEEEEEEcCCEEEEEEEecCCC--cEEEeCEEEECcCCCcCC
Confidence 0011 1223334455667799998888766654 34555542 34 678999999999998753
Q ss_pred --CCCCc-cCCceEecchhhhcc--cCCCCeeEEEcccHHHHHHHHHHHHcCCcEEEEEeCCCcCCCCCHHHHHHHHHHH
Q 011787 191 --LPGIT-IDEKRIVSSTGALAL--NEVPKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIVPSMDGEIRKQFQRSL 265 (477)
Q Consensus 191 --~~g~~-~~~~~~~~~~~~~~~--~~~~~~v~IiG~G~~g~e~a~~l~~~g~~Vtli~~~~~~~~~~~~~~~~~~~~~l 265 (477)
+|+.. .....+.+....... ...+++++|||+|.+|+|+|..|.+.|.+|+++++.+.+.+ ...+.+.+
T Consensus 145 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~v~vvG~G~~g~e~a~~l~~~g~~v~~v~~~~~~~~------~~~~~~~l 218 (338)
T 3itj_A 145 MHLPGEETYWQKGISACAVCDGAVPIFRNKPLAVIGGGDSACEEAQFLTKYGSKVFMLVRKDHLRA------STIMQKRA 218 (338)
T ss_dssp CCCTTHHHHBTTTEESCHHHHTTSGGGTTSEEEEECSSHHHHHHHHHHTTTSSEEEEECSSSSCCS------CHHHHHHH
T ss_pred CCCCCchhccCccEEEchhcccchhhcCCCEEEEECCCHHHHHHHHHHHhcCCEEEEEEcCCccCC------CHHHHHHH
Confidence 44432 112344444433333 34589999999999999999999999999999999887754 23445555
Q ss_pred Hhc-CcEEEeCceEEEEEEcCCeEE-EEEeecCCCceEEEEcCEEEEeecCCCCCCCCCccccceeecCCCCeec-CCCC
Q 011787 266 EKQ-KMKFMLKTKVVGVDLSGDGVK-LTLEPAAGGEKTILEADVVLVSAGRTPFTAGLGLDKIGVETDKMGRIPV-NERF 342 (477)
Q Consensus 266 ~~~-gv~~~~~~~v~~i~~~~~~~~-v~~~~~~~~~~~~i~~D~vi~a~G~~p~~~~l~~~~~gl~~~~~g~i~v-d~~l 342 (477)
.+. ||++++++.+.+++.+++++. +++.+..++++.++++|.||+|+|++|+..+ ++. ++.++++|++.+ |+++
T Consensus 219 ~~~~gv~i~~~~~v~~i~~~~~~~~~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~--~~~-~l~~~~~G~i~v~~~~~ 295 (338)
T 3itj_A 219 EKNEKIEILYNTVALEAKGDGKLLNALRIKNTKKNEETDLPVSGLFYAIGHTPATKI--VAG-QVDTDEAGYIKTVPGSS 295 (338)
T ss_dssp HHCTTEEEECSEEEEEEEESSSSEEEEEEEETTTTEEEEEECSEEEECSCEEECCGG--GBT-TBCBCTTSCBCCCTTSS
T ss_pred HhcCCeEEeecceeEEEEcccCcEEEEEEEECCCCceEEEEeCEEEEEeCCCCChhH--hhC-ceEecCCCcEEEcCccc
Confidence 554 999999999999988776554 7776545556788999999999999999986 344 898998999985 8889
Q ss_pred CCCCCCeEEecccCCC-CCchhHHHHHHHHHHHHHcC
Q 011787 343 ATNIPGVYAIGDVIPG-PMLAHKAEEDGVACVEFLAG 378 (477)
Q Consensus 343 ~t~~~~vya~GD~~~~-~~~~~~A~~~g~~aa~~i~~ 378 (477)
+|+.|+|||+|||+.. +..+..|+.||+.||.+|..
T Consensus 296 ~t~~~~vya~GD~~~~~~~~~~~A~~~g~~aa~~i~~ 332 (338)
T 3itj_A 296 LTSVPGFFAAGDVQDSKYRQAITSAGSGCMAALDAEK 332 (338)
T ss_dssp BCSSTTEEECGGGGCSSCCCHHHHHHHHHHHHHHHHH
T ss_pred ccCCCCEEEeeccCCCCccceeeehhhhHHHHHHHHH
Confidence 9999999999999974 67889999999999999864
No 63
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=100.00 E-value=2.3e-37 Score=296.79 Aligned_cols=295 Identities=20% Similarity=0.261 Sum_probs=220.7
Q ss_pred CCCcEEEECCChHHHHHHHHHHHCCCeEEEEecCCCCCceeeccCccCchhhhhhhHHHHHHHhhhhhCCccccccccCh
Q 011787 42 DENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSVEVDL 121 (477)
Q Consensus 42 ~~~dvvIIGgG~AGl~aA~~l~~~g~~V~lie~~~~~GG~~~~~~~~p~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 121 (477)
.++||+|||||+||+++|..|++.|++|+|+|+ ..+||.|......... . ++. ..+..
T Consensus 4 ~~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~-~~~gg~~~~~~~~~~~----------------~--~~~---~~~~~ 61 (320)
T 1trb_A 4 KHSKLLILGSGPAGYTAAVYAARANLQPVLITG-MEKGGQLTTTTEVENW----------------P--GDP---NDLTG 61 (320)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHTTTCCCEEECC-SSTTGGGGGCSBCCCS----------------T--TCC---SSCBH
T ss_pred CcCCEEEECcCHHHHHHHHHHHHCCCcEEEEcc-CCCCceEecchhhhhC----------------C--CCC---CCCCH
Confidence 358999999999999999999999999999997 5788876543221100 0 000 00111
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhCCeEEEEeEEEEecC--CEEEEEecCCceEEEEecEEEEccCCCCCCC--CCCc-c
Q 011787 122 PAMMAQKDKAVSNLTRGIEGLFKKNKVTYVKGYGKFISP--SEVSVDTIEGGNTVVKGKNIIIATGSDVKSL--PGIT-I 196 (477)
Q Consensus 122 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~--~~~~v~~~~g~~~~i~~d~lvlAtG~~~~~~--~g~~-~ 196 (477)
.. +...+...+.+.+++++.+++..++. +.+.+ +.++ ..+.||+||+|||+.|..+ |+.. .
T Consensus 62 ~~-----------~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~v-~~~~--~~~~~~~lv~AtG~~~~~~~~~g~~~~ 127 (320)
T 1trb_A 62 PL-----------LMERMHEHATKFETEIIFDHINKVDLQNRPFRL-NGDN--GEYTCDALIIATGASARYLGLPSEEAF 127 (320)
T ss_dssp HH-----------HHHHHHHHHHHTTCEEECCCEEEEECSSSSEEE-EESS--CEEEEEEEEECCCEEECCCCCHHHHHT
T ss_pred HH-----------HHHHHHHHHHHCCCEEEEeeeeEEEecCCEEEE-EeCC--CEEEcCEEEECCCCCcCCCCCCChHHh
Confidence 11 22223345566789988888777654 34555 4555 6799999999999987543 3322 1
Q ss_pred CCceEecchhhhcccCCCCeeEEEcccHHHHHHHHHHHHcCCcEEEEEeCCCcCCCCCHHHHHHHHHHHHhcCcEEEeCc
Q 011787 197 DEKRIVSSTGALALNEVPKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIVPSMDGEIRKQFQRSLEKQKMKFMLKT 276 (477)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~~v~IiG~G~~g~e~a~~l~~~g~~Vtli~~~~~~~~~~~~~~~~~~~~~l~~~gv~~~~~~ 276 (477)
....+++..........+++++|||+|.+|+|+|..|++.|.+|+++++.+.+. .++.+.+.+.+.+++.||++++++
T Consensus 128 ~~~~~~~~~~~~~~~~~~~~v~ViG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~--~~~~~~~~l~~~l~~~gv~i~~~~ 205 (320)
T 1trb_A 128 KGRGVSACATSDGFFYRNQKVAVIGGGNTAVEEALYLSNIASEVHLIHRRDGFR--AEKILIKRLMDKVENGNIILHTNR 205 (320)
T ss_dssp BTTTEESCHHHHGGGGTTSEEEEECSSHHHHHHHHHHTTTSSEEEEECSSSSCC--CCHHHHHHHHHHHHTSSEEEECSC
T ss_pred CCceeEecccCCccccCCCeEEEECCCHHHHHHHHHHHhcCCeEEEEEeCCccc--cCHHHHHHHHHhcccCCeEEEcCc
Confidence 123344444443344568999999999999999999999999999999988764 367788888889999999999999
Q ss_pred eEEEEEEcCCeEE-EEEeecCC-CceEEEEcCEEEEeecCCCCCCCCCccccceeecCCCCeecCCCC-----CCCCCCe
Q 011787 277 KVVGVDLSGDGVK-LTLEPAAG-GEKTILEADVVLVSAGRTPFTAGLGLDKIGVETDKMGRIPVNERF-----ATNIPGV 349 (477)
Q Consensus 277 ~v~~i~~~~~~~~-v~~~~~~~-~~~~~i~~D~vi~a~G~~p~~~~l~~~~~gl~~~~~g~i~vd~~l-----~t~~~~v 349 (477)
++++++.+++++. +++.+..+ ++..++++|.|++|+|++|+..++ + .++.++ +|++.||+++ +|+.|+|
T Consensus 206 ~v~~i~~~~~~v~~v~~~~~~~~g~~~~i~~D~vv~a~G~~p~~~~~--~-~~l~~~-~G~i~vd~~~~~~~~~t~~~~v 281 (320)
T 1trb_A 206 TLEEVTGDQMGVTGVRLRDTQNSDNIESLDVAGLFVAIGHSPNTAIF--E-GQLELE-NGYIKVQSGIHGNATQTSIPGV 281 (320)
T ss_dssp EEEEEEECSSSEEEEEEECCTTCCCCEEEECSEEEECSCEEESCGGG--T-TTSCEE-TTEECCCCSSSSCTTBCSSTTE
T ss_pred eeEEEEcCCCceEEEEEEeccCCCceEEEEcCEEEEEeCCCCChHHh--c-cccccc-CceEEECCCcccccccCCCCCE
Confidence 9999987765543 66553222 445789999999999999998763 3 457777 8999999997 7999999
Q ss_pred EEecccCCC-CCchhHHHHHHHHHHHHHcC
Q 011787 350 YAIGDVIPG-PMLAHKAEEDGVACVEFLAG 378 (477)
Q Consensus 350 ya~GD~~~~-~~~~~~A~~~g~~aa~~i~~ 378 (477)
||+|||+.. +..+..|..+|+.||.+|..
T Consensus 282 ya~GD~~~~~~~~~~~A~~~g~~aa~~i~~ 311 (320)
T 1trb_A 282 FAAGDVMDHIYRQAITSAGTGCMAALDAER 311 (320)
T ss_dssp EECGGGGCSSSCCHHHHHHHHHHHHHHHHH
T ss_pred EEcccccCCcchhhhhhhccHHHHHHHHHH
Confidence 999999986 46889999999999999963
No 64
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=100.00 E-value=5.3e-37 Score=296.13 Aligned_cols=296 Identities=23% Similarity=0.324 Sum_probs=214.9
Q ss_pred CCCCCcEEEECCChHHHHHHHHHHHCCCeEEEEecCCCCCceeeccCccCchhhhhhhHHHHHHHhhhhhCCcccccccc
Q 011787 40 ASDENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSVEV 119 (477)
Q Consensus 40 ~~~~~dvvIIGgG~AGl~aA~~l~~~g~~V~lie~~~~~GG~~~~~~~~p~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~ 119 (477)
++.++||+|||||+||+++|..|++.|++|+|||+ ..+||.|......... . ++. ..+
T Consensus 11 ~~~~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~-~~~gg~~~~~~~~~~~----------------~--~~~---~~~ 68 (335)
T 2a87_A 11 HHPVRDVIVIGSGPAGYTAALYAARAQLAPLVFEG-TSFGGALMTTTDVENY----------------P--GFR---NGI 68 (335)
T ss_dssp CCCCEEEEEECCHHHHHHHHHHHHHTTCCCEEECC-SSCSCGGGSCSCBCCS----------------T--TCT---TCB
T ss_pred cCCcCCEEEECCCHHHHHHHHHHHhCCCeEEEEec-CCCCCceeccchhhhc----------------C--CCC---CCC
Confidence 44568999999999999999999999999999998 4788876543221100 0 000 001
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHHhhhCCeEEEEeEEEEecC-CEEEE-EecCCceEEEEecEEEEccCCCCCC--CCCCc
Q 011787 120 DLPAMMAQKDKAVSNLTRGIEGLFKKNKVTYVKGYGKFISP-SEVSV-DTIEGGNTVVKGKNIIIATGSDVKS--LPGIT 195 (477)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~-~~~~v-~~~~g~~~~i~~d~lvlAtG~~~~~--~~g~~ 195 (477)
.... +...+...+.+.+++++.+++..++. +.+.+ .+.++ .++.||+||+|||+.|.. +|+..
T Consensus 69 ~~~~-----------~~~~l~~~~~~~~v~~~~~~v~~i~~~~~~~v~~~~~g--~~~~~d~lviAtG~~~~~~~i~g~~ 135 (335)
T 2a87_A 69 TGPE-----------LMDEMREQALRFGADLRMEDVESVSLHGPLKSVVTADG--QTHRARAVILAMGAAARYLQVPGEQ 135 (335)
T ss_dssp CHHH-----------HHHHHHHHHHHTTCEEECCCEEEEECSSSSEEEEETTS--CEEEEEEEEECCCEEECCCCCTHHH
T ss_pred CHHH-----------HHHHHHHHHHHcCCEEEEeeEEEEEeCCcEEEEEeCCC--CEEEeCEEEECCCCCccCCCCCchH
Confidence 1111 12223344556788888887666654 33455 55666 679999999999998753 34432
Q ss_pred -cCCceEecchhhhcccCCCCeeEEEcccHHHHHHHHHHHHcCCcEEEEEeCCCcCCCCCHHHHHHHHHHHHhcCcEEEe
Q 011787 196 -IDEKRIVSSTGALALNEVPKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIVPSMDGEIRKQFQRSLEKQKMKFML 274 (477)
Q Consensus 196 -~~~~~~~~~~~~~~~~~~~~~v~IiG~G~~g~e~a~~l~~~g~~Vtli~~~~~~~~~~~~~~~~~~~~~l~~~gv~~~~ 274 (477)
.....+++..........+++++|||+|.+|+|+|..|++.|.+|+++++.+.+.. .+.+. .+.+++.||++++
T Consensus 136 ~~~~~~~~~~~~~~~~~~~~~~v~ViG~G~~g~e~a~~l~~~g~~V~l~~~~~~~~~--~~~~~---~~~~~~~gV~v~~ 210 (335)
T 2a87_A 136 ELLGRGVSSCATCDGFFFRDQDIAVIGGGDSAMEEATFLTRFARSVTLVHRRDEFRA--SKIML---DRARNNDKIRFLT 210 (335)
T ss_dssp HTBTTTEESCHHHHGGGGTTCEEEEECSSHHHHHHHHHHTTTCSEEEEECSSSSCSS--CTTHH---HHHHHCTTEEEEC
T ss_pred hccCCceEEeeccchhhcCCCEEEEECCCHHHHHHHHHHHHhCCeEEEEEcCCcCCc--cHHHH---HHHhccCCcEEEe
Confidence 11233444444333345689999999999999999999999999999999887642 22221 2445678999999
Q ss_pred CceEEEEEEcCCeEEEEEeecCCCceEEEEcCEEEEeecCCCCCCCCCccccceeecCCCCeecCCC-CCCCCCCeEEec
Q 011787 275 KTKVVGVDLSGDGVKLTLEPAAGGEKTILEADVVLVSAGRTPFTAGLGLDKIGVETDKMGRIPVNER-FATNIPGVYAIG 353 (477)
Q Consensus 275 ~~~v~~i~~~~~~~~v~~~~~~~~~~~~i~~D~vi~a~G~~p~~~~l~~~~~gl~~~~~g~i~vd~~-l~t~~~~vya~G 353 (477)
++++++++.+++...+.+.+..+++..++++|.|++|+|++|+++++ + .++.++++|+|.||++ ++|+.|+|||+|
T Consensus 211 ~~~v~~i~~~~~~~~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~~--~-~~l~~~~~G~i~vd~~~~~t~~~~iya~G 287 (335)
T 2a87_A 211 NHTVVAVDGDTTVTGLRVRDTNTGAETTLPVTGVFVAIGHEPRSGLV--R-EAIDVDPDGYVLVQGRTTSTSLPGVFAAG 287 (335)
T ss_dssp SEEEEEEECSSSCCEEEEEEETTSCCEEECCSCEEECSCEEECCTTT--B-TTBCBCTTSCBCCSTTSSBCSSTTEEECG
T ss_pred CceeEEEecCCcEeEEEEEEcCCCceEEeecCEEEEccCCccChhHh--h-cccccCCCccEEeCCCCCccCCCCEEEee
Confidence 99999998765433455543333445789999999999999999863 3 4688888899999996 689999999999
Q ss_pred ccCCC-CCchhHHHHHHHHHHHHHcC
Q 011787 354 DVIPG-PMLAHKAEEDGVACVEFLAG 378 (477)
Q Consensus 354 D~~~~-~~~~~~A~~~g~~aa~~i~~ 378 (477)
||++. +..+..|..+|+.||.+|..
T Consensus 288 D~~~~~~~~~~~A~~~g~~aA~~i~~ 313 (335)
T 2a87_A 288 DLVDRTYRQAVTAAGSGCAAAIDAER 313 (335)
T ss_dssp GGTCCSCCCHHHHHHHHHHHHHHHHH
T ss_pred ecCCccHHHHHHHHHhHHHHHHHHHH
Confidence 99976 56889999999999999863
No 65
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=100.00 E-value=4.1e-37 Score=291.72 Aligned_cols=279 Identities=15% Similarity=0.145 Sum_probs=209.3
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCeEEEEecCCCCCceeeccCccCchhhhhhhHHHHHHHhhhhhCCccccccccChH
Q 011787 43 ENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSVEVDLP 122 (477)
Q Consensus 43 ~~dvvIIGgG~AGl~aA~~l~~~g~~V~lie~~~~~GG~~~~~~~~p~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 122 (477)
++||+|||||+||+++|..|++.|++|+|+|++...++........|. ....+..
T Consensus 2 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~~~~~~~~~~~~~-------------------------~~~~~~~ 56 (297)
T 3fbs_A 2 KFDVIIIGGSYAGLSAALQLGRARKNILLVDAGERRNRFASHSHGFLG-------------------------QDGKAPG 56 (297)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEEECCCCGGGGCSCCCSSTT-------------------------CTTCCHH
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCcccccchhhcCCcC-------------------------CCCCCHH
Confidence 379999999999999999999999999999995433221100000000 0011222
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhC-CeEEEEeEEEEecC--CEEEEEecCCceEEEEecEEEEccCCCCC--CCCCCcc-
Q 011787 123 AMMAQKDKAVSNLTRGIEGLFKKN-KVTYVKGYGKFISP--SEVSVDTIEGGNTVVKGKNIIIATGSDVK--SLPGITI- 196 (477)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~~-~v~~~~~~~~~~~~--~~~~v~~~~g~~~~i~~d~lvlAtG~~~~--~~~g~~~- 196 (477)
. +...+.+.+.+. +++++.+++..++. +.+.+.+.++ .++.||+||+|||+.|. .+|+...
T Consensus 57 ~-----------~~~~~~~~~~~~~~v~~~~~~v~~i~~~~~~~~v~~~~g--~~~~~d~vviAtG~~~~~~~~~g~~~~ 123 (297)
T 3fbs_A 57 E-----------IIAEARRQIERYPTIHWVEGRVTDAKGSFGEFIVEIDGG--RRETAGRLILAMGVTDELPEIAGLRER 123 (297)
T ss_dssp H-----------HHHHHHHHHTTCTTEEEEESCEEEEEEETTEEEEEETTS--CEEEEEEEEECCCCEEECCCCBTTGGG
T ss_pred H-----------HHHHHHHHHHhcCCeEEEEeEEEEEEEcCCeEEEEECCC--CEEEcCEEEECCCCCCCCCCCCCchhh
Confidence 1 222333444554 78888887777653 4678888777 68999999999999874 3455432
Q ss_pred CCceEecchhhhcccCCCCeeEEEcccHHHHHHHHHHHHcCCcEEEEEeCCCcCCCCCHHHHHHHHHHHHhcCcEEEeCc
Q 011787 197 DEKRIVSSTGALALNEVPKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIVPSMDGEIRKQFQRSLEKQKMKFMLKT 276 (477)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~~v~IiG~G~~g~e~a~~l~~~g~~Vtli~~~~~~~~~~~~~~~~~~~~~l~~~gv~~~~~~ 276 (477)
....+++..........+++++|||+|.+|+|+|..|.+.| +|+++.+.+. .++ +.+.+.+++.||+++. +
T Consensus 124 ~~~~~~~~~~~~~~~~~~~~v~vvG~G~~~~e~a~~l~~~g-~v~~v~~~~~---~~~----~~~~~~l~~~gv~i~~-~ 194 (297)
T 3fbs_A 124 WGSAVFHCPYCHGYELDQGKIGVIAASPMAIHHALMLPDWG-ETTFFTNGIV---EPD----ADQHALLAARGVRVET-T 194 (297)
T ss_dssp BTTTEESCHHHHTGGGTTCEEEEECCSTTHHHHHHHGGGTS-EEEEECTTTC---CCC----HHHHHHHHHTTCEEEC-S
T ss_pred cCCeeEEcccCcchhhcCCEEEEEecCccHHHHHHHhhhcC-cEEEEECCCC---CCC----HHHHHHHHHCCcEEEc-c
Confidence 22345555443444445899999999999999999999999 9999988765 223 3456778899999995 8
Q ss_pred eEEEEEEcCCeEEEEEeecCCCceEEEEcCEEEEeecCCCCCCCCCccccceeec--CCC-CeecCCCCCCCCCCeEEec
Q 011787 277 KVVGVDLSGDGVKLTLEPAAGGEKTILEADVVLVSAGRTPFTAGLGLDKIGVETD--KMG-RIPVNERFATNIPGVYAIG 353 (477)
Q Consensus 277 ~v~~i~~~~~~~~v~~~~~~~~~~~~i~~D~vi~a~G~~p~~~~l~~~~~gl~~~--~~g-~i~vd~~l~t~~~~vya~G 353 (477)
++++++.++ .+.+. +++++++|.|++|+|++|+.++ +++.+++.+ ++| ++.||++++|+.|+|||+|
T Consensus 195 ~v~~i~~~~---~v~~~-----~g~~~~~D~vi~a~G~~p~~~~--~~~~g~~~~~~~~G~~i~vd~~~~t~~~~vya~G 264 (297)
T 3fbs_A 195 RIREIAGHA---DVVLA-----DGRSIALAGLFTQPKLRITVDW--IEKLGCAVEEGPMGSTIVTDPMKQTTARGIFACG 264 (297)
T ss_dssp CEEEEETTE---EEEET-----TSCEEEESEEEECCEEECCCSC--HHHHTCCEEEETTEEEECCCTTCBCSSTTEEECS
T ss_pred eeeeeecCC---eEEeC-----CCCEEEEEEEEEccCcccCchh--HHhcCCccccCCCCceEEeCCCCccCCCCEEEEe
Confidence 999996433 45544 5678999999999999999875 677788776 457 8999999999999999999
Q ss_pred ccCCCCCchhHHHHHHHHHHHHHcC
Q 011787 354 DVIPGPMLAHKAEEDGVACVEFLAG 378 (477)
Q Consensus 354 D~~~~~~~~~~A~~~g~~aa~~i~~ 378 (477)
||++.|.+++.|..||+.||.+|..
T Consensus 265 D~~~~~~~~~~A~~~g~~aa~~i~~ 289 (297)
T 3fbs_A 265 DVARPAGSVALAVGDGAMAGAAAHR 289 (297)
T ss_dssp GGGCTTCCHHHHHHHHHHHHHHHHH
T ss_pred ecCCchHHHHHHHHhHHHHHHHHHH
Confidence 9999899999999999999999863
No 66
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=100.00 E-value=1.5e-37 Score=299.67 Aligned_cols=292 Identities=20% Similarity=0.249 Sum_probs=219.2
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCeEEEEecCCCCCceeeccCccCchhhhhhhHHHHHHHhhhhhCCccccccccChH
Q 011787 43 ENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSVEVDLP 122 (477)
Q Consensus 43 ~~dvvIIGgG~AGl~aA~~l~~~g~~V~lie~~~~~GG~~~~~~~~p~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 122 (477)
++||+|||||+||++||..|++.|++|+|||+++.+||.|.+ +.|...+... .++. ....
T Consensus 7 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~gG~~~~--~~~~~~~~~~-------------~~~~----~~~~- 66 (332)
T 3lzw_A 7 VYDITIIGGGPVGLFTAFYGGMRQASVKIIESLPQLGGQLSA--LYPEKYIYDV-------------AGFP----KIRA- 66 (332)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHHH--HCTTSEECCS-------------TTCS----SEEH-
T ss_pred cceEEEECCCHHHHHHHHHHHHCCCCEEEEEcCCCCCceehh--cCCCceEecc-------------CCCC----CCCH-
Confidence 479999999999999999999999999999999999998742 2222111000 0000 0111
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhCCeEEEE-eEEEEecC--C-EEEEEecCCceEEEEecEEEEccCC---CCC--CCCC
Q 011787 123 AMMAQKDKAVSNLTRGIEGLFKKNKVTYVK-GYGKFISP--S-EVSVDTIEGGNTVVKGKNIIIATGS---DVK--SLPG 193 (477)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~-~~~~~~~~--~-~~~v~~~~g~~~~i~~d~lvlAtG~---~~~--~~~g 193 (477)
..+...+...+++.+++++. ..+..++. + .+.+.+.++ ++.||+||+|||+ .|. .+|+
T Consensus 67 ----------~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~v~~~~g---~~~~d~vVlAtG~~~~~p~~~~~~g 133 (332)
T 3lzw_A 67 ----------QELINNLKEQMAKFDQTICLEQAVESVEKQADGVFKLVTNEE---THYSKTVIITAGNGAFKPRKLELEN 133 (332)
T ss_dssp ----------HHHHHHHHHHHTTSCCEEECSCCEEEEEECTTSCEEEEESSE---EEEEEEEEECCTTSCCEECCCCCTT
T ss_pred ----------HHHHHHHHHHHHHhCCcEEccCEEEEEEECCCCcEEEEECCC---EEEeCEEEECCCCCcCCCCCCCCCC
Confidence 12333444556667888875 45555543 2 567777776 3999999999999 564 3455
Q ss_pred Ccc-CCceEecchhhhcccC-CCCeeEEEcccHHHHHHHHHHHHcCCcEEEEEeCCCcCCCCCHHHHHHHHHHHHhcCcE
Q 011787 194 ITI-DEKRIVSSTGALALNE-VPKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIVPSMDGEIRKQFQRSLEKQKMK 271 (477)
Q Consensus 194 ~~~-~~~~~~~~~~~~~~~~-~~~~v~IiG~G~~g~e~a~~l~~~g~~Vtli~~~~~~~~~~~~~~~~~~~~~l~~~gv~ 271 (477)
... ....+++ ....... .+++++|||+|.+|+|+|..|++.+.+|+++++.+.+.+ .+. ..+.+++.||+
T Consensus 134 ~~~~~g~~~~~--~~~~~~~~~~~~v~vvG~g~~~~e~a~~l~~~~~~v~~~~~~~~~~~-~~~-----~~~~l~~~gv~ 205 (332)
T 3lzw_A 134 AEQYEGKNLHY--FVDDLQKFAGRRVAILGGGDSAVDWALMLEPIAKEVSIIHRRDKFRA-HEH-----SVENLHASKVN 205 (332)
T ss_dssp GGGGBTTTEES--SCSCGGGGBTCEEEEECSSHHHHHHHHHHTTTBSEEEEECSSSSCSS-CHH-----HHHHHHHSSCE
T ss_pred hhhccCceEEE--ecCCHHHcCCCEEEEECCCHhHHHHHHHHHhhCCeEEEEEecCcCCc-cHH-----HHHHHhcCCeE
Confidence 432 2223333 2222222 379999999999999999999999999999999887643 222 23447889999
Q ss_pred EEeCceEEEEEEcCCeEEEEEeecCCCceEEEEcCEEEEeecCCCCCCCCCccccceeecCCCCeecCCCCCCCCCCeEE
Q 011787 272 FMLKTKVVGVDLSGDGVKLTLEPAAGGEKTILEADVVLVSAGRTPFTAGLGLDKIGVETDKMGRIPVNERFATNIPGVYA 351 (477)
Q Consensus 272 ~~~~~~v~~i~~~~~~~~v~~~~~~~~~~~~i~~D~vi~a~G~~p~~~~l~~~~~gl~~~~~g~i~vd~~l~t~~~~vya 351 (477)
+++++++.+++.+++...+++.+..++++.++++|.|++|+|++|+.++ ++..++.. ++|+|.||+++||+.|+|||
T Consensus 206 ~~~~~~v~~i~~~~~~~~v~~~~~~~g~~~~~~~D~vv~a~G~~p~~~~--~~~~~~~~-~~g~i~vd~~~~t~~~~vya 282 (332)
T 3lzw_A 206 VLTPFVPAELIGEDKIEQLVLEEVKGDRKEILEIDDLIVNYGFVSSLGP--IKNWGLDI-EKNSIVVKSTMETNIEGFFA 282 (332)
T ss_dssp EETTEEEEEEECSSSCCEEEEEETTSCCEEEEECSEEEECCCEECCCGG--GGGSSCCE-ETTEEECCTTSBCSSTTEEE
T ss_pred EEeCceeeEEecCCceEEEEEEecCCCceEEEECCEEEEeeccCCCchH--HhhcCccc-cCCeEEeCCCCceecCCEEE
Confidence 9999999999877666667777655666788999999999999999886 67888888 67899999999999999999
Q ss_pred ecccC---CCCCchhHHHHHHHHHHHHHcC
Q 011787 352 IGDVI---PGPMLAHKAEEDGVACVEFLAG 378 (477)
Q Consensus 352 ~GD~~---~~~~~~~~A~~~g~~aa~~i~~ 378 (477)
+|||+ +.+.++..|..||+.||.+|+.
T Consensus 283 ~GD~~~~~~~~~~~~~A~~~g~~aa~~i~~ 312 (332)
T 3lzw_A 283 AGDICTYEGKVNLIASGFGEAPTAVNNAKA 312 (332)
T ss_dssp CGGGEECTTCCCCHHHHHHHHHHHHHHHHH
T ss_pred ccceecCCCCcceEeeehhhHHHHHHHHHH
Confidence 99999 5678999999999999999974
No 67
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=100.00 E-value=7.4e-37 Score=298.18 Aligned_cols=300 Identities=21% Similarity=0.295 Sum_probs=218.5
Q ss_pred CCCCCcEEEECCChHHHHHHHHHHHCCCeEEEEecCCCCCceeeccCccCchhhhhhhHHHHHHHhhhhhCCcccccccc
Q 011787 40 ASDENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSVEV 119 (477)
Q Consensus 40 ~~~~~dvvIIGgG~AGl~aA~~l~~~g~~V~lie~~~~~GG~~~~~~~~p~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~ 119 (477)
|+.++||+|||||+||+++|..|++.|++|+|||+.+.+||.|.+. .|++.+... .++. .+
T Consensus 11 ~~~~~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~gg~~~~~--~~~~~~~~~-------------~~~~----~~ 71 (360)
T 3ab1_A 11 HHDMRDLTIIGGGPTGIFAAFQCGMNNISCRIIESMPQLGGQLAAL--YPEKHIYDV-------------AGFP----EV 71 (360)
T ss_dssp --CCEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHHHT--CTTSEECCS-------------TTCS----SE
T ss_pred cCCCCCEEEECCCHHHHHHHHHHHhCCCCEEEEecCCCCCCccccc--CCCcccccC-------------CCCC----CC
Confidence 4456899999999999999999999999999999998999987532 222111000 0000 01
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHHhhhCCeEEEEe-EEEEecC---CEEEEEecCCceEEEEecEEEEccCCC---CCC--
Q 011787 120 DLPAMMAQKDKAVSNLTRGIEGLFKKNKVTYVKG-YGKFISP---SEVSVDTIEGGNTVVKGKNIIIATGSD---VKS-- 190 (477)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-~~~~~~~---~~~~v~~~~g~~~~i~~d~lvlAtG~~---~~~-- 190 (477)
+... +...+...+.+.+++++.+ .+..++. ..+.|.+.+| ..+.||+||+|||+. |..
T Consensus 72 ~~~~-----------~~~~l~~~~~~~~~~~~~~~~v~~i~~~~~~~~~v~~~~g--~~~~~~~li~AtG~~~~~~~~~~ 138 (360)
T 3ab1_A 72 PAID-----------LVESLWAQAERYNPDVVLNETVTKYTKLDDGTFETRTNTG--NVYRSRAVLIAAGLGAFEPRKLP 138 (360)
T ss_dssp EHHH-----------HHHHHHHHHHTTCCEEECSCCEEEEEECTTSCEEEEETTS--CEEEEEEEEECCTTCSCCBCCCG
T ss_pred CHHH-----------HHHHHHHHHHHhCCEEEcCCEEEEEEECCCceEEEEECCC--cEEEeeEEEEccCCCcCCCCCCC
Confidence 1111 2222334455667877655 4555442 2567777777 679999999999994 322
Q ss_pred CCC-Cc-cCCceEec-chhhhcccCCCCeeEEEcccHHHHHHHHHHHHcCCcEEEEEeCCCcCCCCCHHHHHHHHHHHHh
Q 011787 191 LPG-IT-IDEKRIVS-STGALALNEVPKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIVPSMDGEIRKQFQRSLEK 267 (477)
Q Consensus 191 ~~g-~~-~~~~~~~~-~~~~~~~~~~~~~v~IiG~G~~g~e~a~~l~~~g~~Vtli~~~~~~~~~~~~~~~~~~~~~l~~ 267 (477)
+|+ .. .....++. ..+... ..+++++|||+|.+|+|+|..|++.|.+|+++++.+.+.+. +...+.+.+.+++
T Consensus 139 i~g~~~~~~~~~v~~~~~~~~~--~~~~~vvVvG~G~~g~e~A~~l~~~g~~V~lv~~~~~~~~~--~~~~~~l~~~~~~ 214 (360)
T 3ab1_A 139 QLGNIDHLTGSSVYYAVKSVED--FKGKRVVIVGGGDSALDWTVGLIKNAASVTLVHRGHEFQGH--GKTAHEVERARAN 214 (360)
T ss_dssp GGCCCTTTBTTTEESSCSCGGG--GTTCEEEEECSSHHHHHHHHHTTTTSSEEEEECSSSSCSSC--SHHHHSSHHHHHH
T ss_pred CCCchhhCcCceEEEecCCHHH--cCCCcEEEECCCHHHHHHHHHHHhcCCEEEEEEcCCCCCCC--HHHHHHHHHHhhc
Confidence 334 22 11122322 122211 24799999999999999999999999999999998876542 3566777888889
Q ss_pred cCcEEEeCceEEEEEEcCCeE-EEEEeecCCCceEEEEcCEEEEeecCCCCCCCCCccccceeecCCCCeecCCCCCCCC
Q 011787 268 QKMKFMLKTKVVGVDLSGDGV-KLTLEPAAGGEKTILEADVVLVSAGRTPFTAGLGLDKIGVETDKMGRIPVNERFATNI 346 (477)
Q Consensus 268 ~gv~~~~~~~v~~i~~~~~~~-~v~~~~~~~~~~~~i~~D~vi~a~G~~p~~~~l~~~~~gl~~~~~g~i~vd~~l~t~~ 346 (477)
.||++++++++++++.+++++ .+.+. ..+++...+++|.||+|+|++|+.++ ++..++.++ +|+|.||+++||++
T Consensus 215 ~gv~i~~~~~v~~i~~~~~~v~~v~~~-~~~g~~~~i~~D~vi~a~G~~p~~~~--l~~~~~~~~-~g~i~vd~~~~t~~ 290 (360)
T 3ab1_A 215 GTIDVYLETEVASIEESNGVLTRVHLR-SSDGSKWTVEADRLLILIGFKSNLGP--LARWDLELY-ENALVVDSHMKTSV 290 (360)
T ss_dssp TSEEEESSEEEEEEEEETTEEEEEEEE-ETTCCEEEEECSEEEECCCBCCSCGG--GGGSSCCEE-TTEEECCTTSBCSS
T ss_pred CceEEEcCcCHHHhccCCCceEEEEEE-ecCCCeEEEeCCEEEECCCCCCCHHH--HHhhccccc-cCeeeecCCCcCCC
Confidence 999999999999998876654 35543 12334478999999999999999876 667788877 68999999999999
Q ss_pred CCeEEecccCC---CCCchhHHHHHHHHHHHHHcCC
Q 011787 347 PGVYAIGDVIP---GPMLAHKAEEDGVACVEFLAGK 379 (477)
Q Consensus 347 ~~vya~GD~~~---~~~~~~~A~~~g~~aa~~i~~~ 379 (477)
|+|||+|||+. .+.++..|..||+.||.+|.+.
T Consensus 291 ~~vya~GD~~~~~~~~~~~~~A~~~g~~aa~~i~~~ 326 (360)
T 3ab1_A 291 DGLYAAGDIAYYPGKLKIIQTGLSEATMAVRHSLSY 326 (360)
T ss_dssp TTEEECSTTEECTTCCCSHHHHHHHHHHHHHHHHHH
T ss_pred CCEEEecCccCCCCccceeehhHHHHHHHHHHHHhh
Confidence 99999999995 4678999999999999999753
No 68
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=100.00 E-value=2e-36 Score=292.00 Aligned_cols=294 Identities=23% Similarity=0.252 Sum_probs=213.4
Q ss_pred CCCcEEEECCChHHHHHHHHHHHCCCeEEEEec----CCCCCceeeccCccCchhhhhhhHHHHHHHhhhhhCCcccccc
Q 011787 42 DENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEK----RGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSV 117 (477)
Q Consensus 42 ~~~dvvIIGgG~AGl~aA~~l~~~g~~V~lie~----~~~~GG~~~~~~~~p~~~l~~~~~~~~~~~~~~~~~g~~~~~~ 117 (477)
.++||+|||||++|+++|..|++.|++|+|+|+ ...+||.+........ +. ++. .
T Consensus 7 ~~~~vvIIG~G~aGl~~A~~l~~~g~~v~lie~~~~~~~~~gg~~~~~~~~~~----------------~~--~~~---~ 65 (333)
T 1vdc_A 7 HNTRLCIVGSGPAAHTAAIYAARAELKPLLFEGWMANDIAPGGQLTTTTDVEN----------------FP--GFP---E 65 (333)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCCEEECCSSBTTBCTTCGGGGCSEECC----------------ST--TCT---T
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCeEEEEeccCccccCCCceeeecccccc----------------CC--CCc---c
Confidence 458999999999999999999999999999998 5567776543321100 00 000 0
Q ss_pred ccChHHHHHHHHHHHHHHHHHHHHHhhhCCeEEEEeEEEEecC--CEEEEEecCCceEEEEecEEEEccCCCCCC--CCC
Q 011787 118 EVDLPAMMAQKDKAVSNLTRGIEGLFKKNKVTYVKGYGKFISP--SEVSVDTIEGGNTVVKGKNIIIATGSDVKS--LPG 193 (477)
Q Consensus 118 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~--~~~~v~~~~g~~~~i~~d~lvlAtG~~~~~--~~g 193 (477)
.+... .+...+...+.+.+++++.+++..++. +.+.|.+ ++ ..+.||+||+|||+.|.. +|+
T Consensus 66 ~~~~~-----------~~~~~l~~~~~~~gv~~~~~~v~~i~~~~~~~~v~~-~~--~~~~~~~vv~A~G~~~~~~~~~g 131 (333)
T 1vdc_A 66 GILGV-----------ELTDKFRKQSERFGTTIFTETVTKVDFSSKPFKLFT-DS--KAILADAVILAIGAVAKRLSFVG 131 (333)
T ss_dssp CEEHH-----------HHHHHHHHHHHHTTCEEECCCCCEEECSSSSEEEEC-SS--EEEEEEEEEECCCEEECCCCCBT
T ss_pred CCCHH-----------HHHHHHHHHHHHCCCEEEEeEEEEEEEcCCEEEEEE-CC--cEEEcCEEEECCCCCcCCCCCCC
Confidence 01111 122233345566789988877666553 3456666 55 689999999999998753 344
Q ss_pred CccC-----CceEecchhhhccc--CCCCeeEEEcccHHHHHHHHHHHHcCCcEEEEEeCCCcCCCCCHHHHHHHHHHHH
Q 011787 194 ITID-----EKRIVSSTGALALN--EVPKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIVPSMDGEIRKQFQRSLE 266 (477)
Q Consensus 194 ~~~~-----~~~~~~~~~~~~~~--~~~~~v~IiG~G~~g~e~a~~l~~~g~~Vtli~~~~~~~~~~~~~~~~~~~~~l~ 266 (477)
.... ...+++........ ..+++++|||+|.+|+|+|..|++.|.+|+++++.+.+.. .+.+ ..+.++
T Consensus 132 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~VvG~G~~g~e~A~~l~~~g~~V~lv~~~~~~~~--~~~~---~~~~~~ 206 (333)
T 1vdc_A 132 SGEVLGGFWNRGISACAVCDGAAPIFRNKPLAVIGGGDSAMEEANFLTKYGSKVYIIHRRDAFRA--SKIM---QQRALS 206 (333)
T ss_dssp CSSSSSCCBTTTEESCHHHHTTSGGGTTSEEEEECCSHHHHHHHHHHTTTSSEEEEECSSSSCCS--CHHH---HHHHHT
T ss_pred ccccccccccCcEEEeccCccchhhcCCCeEEEECCChHHHHHHHHHHhcCCeEEEEecCCcCCc--cHHH---HHHHHh
Confidence 3320 12333333333332 4689999999999999999999999999999999886532 2222 234457
Q ss_pred hcCcEEEeCceEEEEEEcCC--eE-EEEEeecCCCceEEEEcCEEEEeecCCCCCCCCCccccceeecCCCCeecCCC-C
Q 011787 267 KQKMKFMLKTKVVGVDLSGD--GV-KLTLEPAAGGEKTILEADVVLVSAGRTPFTAGLGLDKIGVETDKMGRIPVNER-F 342 (477)
Q Consensus 267 ~~gv~~~~~~~v~~i~~~~~--~~-~v~~~~~~~~~~~~i~~D~vi~a~G~~p~~~~l~~~~~gl~~~~~g~i~vd~~-l 342 (477)
+.||++++++++.++..+++ ++ .+.+.+..+++..++++|.|++|+|++|+..++ + .++.++++|+|.||++ +
T Consensus 207 ~~gv~i~~~~~v~~i~~~~~~~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~~--~-~~l~~~~~G~i~vd~~~~ 283 (333)
T 1vdc_A 207 NPKIDVIWNSSVVEAYGDGERDVLGGLKVKNVVTGDVSDLKVSGLFFAIGHEPATKFL--D-GGVELDSDGYVVTKPGTT 283 (333)
T ss_dssp CTTEEEECSEEEEEEEESSSSSSEEEEEEEETTTCCEEEEECSEEEECSCEEESCGGG--T-TSSCBCTTSCBCCCTTSC
T ss_pred CCCeeEecCCceEEEeCCCCccceeeEEEEecCCCceEEEecCEEEEEeCCccchHHh--h-ccccccCCCCEEechhhc
Confidence 78999999999999987664 44 366654334555789999999999999999863 3 4688888899999997 5
Q ss_pred CCCCCCeEEecccCCC-CCchhHHHHHHHHHHHHHcC
Q 011787 343 ATNIPGVYAIGDVIPG-PMLAHKAEEDGVACVEFLAG 378 (477)
Q Consensus 343 ~t~~~~vya~GD~~~~-~~~~~~A~~~g~~aa~~i~~ 378 (477)
+|+.|+|||+|||+.. +..+..|..||+.||.+|..
T Consensus 284 ~t~~~~vya~GD~~~~~~~~~~~A~~~g~~aa~~i~~ 320 (333)
T 1vdc_A 284 QTSVPGVFAAGDVQDKKYRQAITAAGTGCMAALDAEH 320 (333)
T ss_dssp BCSSTTEEECGGGGCSSCCCHHHHHHHHHHHHHHHHH
T ss_pred ccCCCCEEEeeeccCCCchhHHHHHHhHHHHHHHHHH
Confidence 8999999999999976 46899999999999999963
No 69
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=100.00 E-value=8.9e-36 Score=303.19 Aligned_cols=292 Identities=25% Similarity=0.383 Sum_probs=220.5
Q ss_pred CCCCcEEEECCChHHHHHHHHHHHCCCeEEEEecCCCCCceeeccCccCchhhhhhhHHHHHHHhhhhhCCccccccccC
Q 011787 41 SDENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSVEVD 120 (477)
Q Consensus 41 ~~~~dvvIIGgG~AGl~aA~~l~~~g~~V~lie~~~~~GG~~~~~~~~p~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~~ 120 (477)
...+||+||||||||++||.+|++.|++|+|+|+ .+||+|.....++... +.. ...
T Consensus 210 ~~~~dVvIIGgG~AGl~aA~~la~~G~~v~lie~--~~GG~~~~~~~~~~~~------------------~~~----~~~ 265 (521)
T 1hyu_A 210 RDAYDVLIVGSGPAGAAAAVYSARKGIRTGLMGE--RFGGQVLDTVDIENYI------------------SVP----KTE 265 (521)
T ss_dssp SCCEEEEEECCSHHHHHHHHHHHHTTCCEEEECS--STTGGGTTCSCBCCBT------------------TBS----SBC
T ss_pred cCcccEEEECCcHHHHHHHHHHHhCCCeEEEEEC--CCCCcccccccccccC------------------CCC----CCC
Confidence 3468999999999999999999999999999986 5788876543322100 000 011
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhhhCCeEEEEe-EEEEecCC-----EEEEEecCCceEEEEecEEEEccCCCCC--CCC
Q 011787 121 LPAMMAQKDKAVSNLTRGIEGLFKKNKVTYVKG-YGKFISPS-----EVSVDTIEGGNTVVKGKNIIIATGSDVK--SLP 192 (477)
Q Consensus 121 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-~~~~~~~~-----~~~v~~~~g~~~~i~~d~lvlAtG~~~~--~~~ 192 (477)
.. .+...+...+++.+++++.+ .+..++.. .+.|.+.+| ..+.||+||+|||++|+ .+|
T Consensus 266 ~~-----------~l~~~l~~~~~~~gv~v~~~~~v~~i~~~~~~~~~~~V~~~~g--~~~~~d~vVlAtG~~~~~~~ip 332 (521)
T 1hyu_A 266 GQ-----------KLAGALKAHVSDYDVDVIDSQSASKLVPAATEGGLHQIETASG--AVLKARSIIIATGAKWRNMNVP 332 (521)
T ss_dssp HH-----------HHHHHHHHHHHTSCEEEECSCCEEEEECCSSTTSCEEEEETTS--CEEEEEEEEECCCEEECCCCCT
T ss_pred HH-----------HHHHHHHHHHHHcCCEEEcCCEEEEEEeccCCCceEEEEECCC--CEEEcCEEEECCCCCcCCCCCC
Confidence 11 12233445566789999988 67777532 577877777 67999999999999875 345
Q ss_pred CCc-cCCceEecchhhhcccCCCCeeEEEcccHHHHHHHHHHHHcCCcEEEEEeCCCcCCCCCHHHHHHHHHHHHh-cCc
Q 011787 193 GIT-IDEKRIVSSTGALALNEVPKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIVPSMDGEIRKQFQRSLEK-QKM 270 (477)
Q Consensus 193 g~~-~~~~~~~~~~~~~~~~~~~~~v~IiG~G~~g~e~a~~l~~~g~~Vtli~~~~~~~~~~~~~~~~~~~~~l~~-~gv 270 (477)
|.. .....++...........+++++|||+|.+|+|+|..|++.|.+|+++++.+.+.+ + ..+.+.+++ .||
T Consensus 333 G~~~~~~~~v~~~~~~~~~~~~~k~V~ViGgG~~g~E~A~~L~~~g~~Vtlv~~~~~l~~--~----~~l~~~l~~~~gV 406 (521)
T 1hyu_A 333 GEDQYRTKGVTYCPHCDGPLFKGKRVAVIGGGNSGVEAAIDLAGIVEHVTLLEFAPEMKA--D----QVLQDKVRSLKNV 406 (521)
T ss_dssp TTTTTTTTTEECCTTCCGGGGBTSEEEEECCSHHHHHHHHHHHHHBSEEEEECSSSSCCS--C----HHHHHHHTTCTTE
T ss_pred ChhhhcCceEEEeecCchhhcCCCeEEEECCCHHHHHHHHHHHhhCCEEEEEEeCcccCc--C----HHHHHHHhcCCCc
Confidence 543 12233443333222233589999999999999999999999999999999887653 3 345566776 699
Q ss_pred EEEeCceEEEEEEcCCeE-EEEEeecCCCceEEEEcCEEEEeecCCCCCCCCCccccceeecCCCCeecCCCCCCCCCCe
Q 011787 271 KFMLKTKVVGVDLSGDGV-KLTLEPAAGGEKTILEADVVLVSAGRTPFTAGLGLDKIGVETDKMGRIPVNERFATNIPGV 349 (477)
Q Consensus 271 ~~~~~~~v~~i~~~~~~~-~v~~~~~~~~~~~~i~~D~vi~a~G~~p~~~~l~~~~~gl~~~~~g~i~vd~~l~t~~~~v 349 (477)
++++++.++++..+++++ .+.+.+..+++..++++|.|++++|++||+++ ++. .+.++++|+|.||++++|++|+|
T Consensus 407 ~v~~~~~v~~i~~~~~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~~pn~~~--l~~-~l~~~~~G~I~Vd~~~~ts~p~V 483 (521)
T 1hyu_A 407 DIILNAQTTEVKGDGSKVVGLEYRDRVSGDIHSVALAGIFVQIGLLPNTHW--LEG-ALERNRMGEIIIDAKCETSVKGV 483 (521)
T ss_dssp EEECSEEEEEEEECSSSEEEEEEEETTTCCEEEEECSEEEECCCEEESCGG--GTT-TSCBCTTSCBCCCTTCBCSSTTE
T ss_pred EEEeCCEEEEEEcCCCcEEEEEEEeCCCCceEEEEcCEEEECcCCCCCchH--Hhh-hhccCCCCcEEeCCCCCCCCCCE
Confidence 999999999998766555 46665444455568999999999999999976 344 37788889999999999999999
Q ss_pred EEecccCCCC-CchhHHHHHHHHHHHHHcC
Q 011787 350 YAIGDVIPGP-MLAHKAEEDGVACVEFLAG 378 (477)
Q Consensus 350 ya~GD~~~~~-~~~~~A~~~g~~aa~~i~~ 378 (477)
||+|||+..+ ..+..|+.||+.||.+|..
T Consensus 484 fA~GD~~~~~~~~~~~A~~~g~~aa~~i~~ 513 (521)
T 1hyu_A 484 FAAGDCTTVPYKQIIIATGEGAKASLSAFD 513 (521)
T ss_dssp EECSTTBCCSSCCHHHHHHHHHHHHHHHHH
T ss_pred EEeecccCCCcceeeehHHhHHHHHHHHHH
Confidence 9999999865 5789999999999999863
No 70
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=100.00 E-value=2.4e-36 Score=329.05 Aligned_cols=309 Identities=19% Similarity=0.196 Sum_probs=219.6
Q ss_pred CCCcEEEECCChHHHHHHHHHHHCCC-eEEEEecCCCCCceeeccCccCchhhhhhhHHHHHHHhhhhhCCccccccccC
Q 011787 42 DENDVVVIGGGPGGYVAAIKAAQLGL-KTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSVEVD 120 (477)
Q Consensus 42 ~~~dvvIIGgG~AGl~aA~~l~~~g~-~V~lie~~~~~GG~~~~~~~~p~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~~ 120 (477)
..+||+||||||||++||.+|++.|+ +|+|||+.+.+||++. .++|...+ +
T Consensus 186 ~~~~VvVIGgGpAGl~aA~~L~~~G~~~Vtv~E~~~~~GG~~~--~~ip~~~~--------------------------~ 237 (1025)
T 1gte_A 186 YSAKIALLGAGPASISCASFLARLGYSDITIFEKQEYVGGLST--SEIPQFRL--------------------------P 237 (1025)
T ss_dssp GGCCEEEECCSHHHHHHHHHHHHTTCCCEEEEESSSSCSTHHH--HTSCTTTS--------------------------C
T ss_pred CCCEEEEECccHHHHHHHHHHHhcCCCcEEEEeCCCCCCcccc--ccCCcccC--------------------------C
Confidence 36899999999999999999999999 7999999889999642 12232110 0
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhhhCCeEEEEeEEEEecCCEEEEEecCCceEEEEecEEEEccCCC-CCCCC---CCcc
Q 011787 121 LPAMMAQKDKAVSNLTRGIEGLFKKNKVTYVKGYGKFISPSEVSVDTIEGGNTVVKGKNIIIATGSD-VKSLP---GITI 196 (477)
Q Consensus 121 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~v~~~~g~~~~i~~d~lvlAtG~~-~~~~~---g~~~ 196 (477)
. . ...+...++++.+++++.++.... + .+.+.++ ..+.||+||||||+. |+.+| |++
T Consensus 238 ~-~-----------~~~~~~~~~~~~gv~~~~~~~v~~--~--~v~~~~~--~~~~~d~vvlAtGa~~p~~l~~~~G~~- 298 (1025)
T 1gte_A 238 Y-D-----------VVNFEIELMKDLGVKIICGKSLSE--N--EITLNTL--KEEGYKAAFIGIGLPEPKTDDIFQGLT- 298 (1025)
T ss_dssp H-H-----------HHHHHHHHHHTTTCEEEESCCBST--T--SBCHHHH--HHTTCCEEEECCCCCEECCCGGGTTCC-
T ss_pred H-H-----------HHHHHHHHHHHCCcEEEcccEecc--c--eEEhhhc--CccCCCEEEEecCCCCCCCCCCCCCCC-
Confidence 0 0 111123456678999988764321 1 1222333 346799999999994 65443 332
Q ss_pred CCceEecchhhhc----------------ccCCCCeeEEEcccHHHHHHHHHHHHcCC-cEEEEEeCC-CcCCCCCHHHH
Q 011787 197 DEKRIVSSTGALA----------------LNEVPKKLVVIGAGYIGLEMGSVWARLGS-EVTVVEFAA-DIVPSMDGEIR 258 (477)
Q Consensus 197 ~~~~~~~~~~~~~----------------~~~~~~~v~IiG~G~~g~e~a~~l~~~g~-~Vtli~~~~-~~~~~~~~~~~ 258 (477)
....+++..+++. +...+++|+|||||.+|+|+|..+.+.|. +||++++.+ ..++.+++++
T Consensus 299 ~~~gv~~a~~~L~~~~~~~~~~~~~~~~~~~~~~~~VvVIGgG~~g~e~A~~~~~~G~~~Vtvv~r~~~~~~~~~~~e~- 377 (1025)
T 1gte_A 299 QDQGFYTSKDFLPLVAKSSKAGMCACHSPLPSIRGAVIVLGAGDTAFDCATSALRCGARRVFLVFRKGFVNIRAVPEEV- 377 (1025)
T ss_dssp TTTTEEEHHHHHHHHHHHHCBTTBSCCCCCCCCCSEEEEECSSHHHHHHHHHHHHTTCSEEEEECSSCGGGCCSCHHHH-
T ss_pred CCCCEEEhHHHHHHHHhhcccccccccccccccCCcEEEECCChHHHHHHHHHHHcCCCEEEEEEecChhhCCCCHHHH-
Confidence 1245777665542 12347799999999999999999999996 899999988 4567666554
Q ss_pred HHHHHHHHhcCcEEEeCceEEEEEEcCCeEE-EEEeec---CC-------CceEEEEcCEEEEeecCCCCCCCCCccc-c
Q 011787 259 KQFQRSLEKQKMKFMLKTKVVGVDLSGDGVK-LTLEPA---AG-------GEKTILEADVVLVSAGRTPFTAGLGLDK-I 326 (477)
Q Consensus 259 ~~~~~~l~~~gv~~~~~~~v~~i~~~~~~~~-v~~~~~---~~-------~~~~~i~~D~vi~a~G~~p~~~~l~~~~-~ 326 (477)
+.+++.||++++++.++++..+++++. +++... .+ ++..++++|.||+|+|++|+...+ ++. .
T Consensus 378 ----~~~~~~Gv~~~~~~~~~~i~~~~g~v~~v~~~~~~~~~~g~~~~~~g~~~~i~aD~Vi~A~G~~~~~~~l-~~~~~ 452 (1025)
T 1gte_A 378 ----ELAKEEKCEFLPFLSPRKVIVKGGRIVAVQFVRTEQDETGKWNEDEDQIVHLKADVVISAFGSVLRDPKV-KEALS 452 (1025)
T ss_dssp ----HHHHHTTCEEECSEEEEEEEEETTEEEEEEEEEEEECTTSCEEEEEEEEEEEECSEEEECSCEECCCHHH-HHHTT
T ss_pred ----HHHHHcCCEEEeCCCceEEEccCCeEEEEEEEEeEEcCCCCcccCCCceEEEECCEEEECCCCCCCchhh-hhccc
Confidence 356778999999999999987666543 443210 11 223579999999999998754333 333 5
Q ss_pred ceeecCCCCeecCC-CCCCCCCCeEEecccCCCCCchhHHHHHHHHHHHHHcCCC---CCCCCCCCceEEEcCCCeeeec
Q 011787 327 GVETDKMGRIPVNE-RFATNIPGVYAIGDVIPGPMLAHKAEEDGVACVEFLAGKH---GHVDYDKVPGVVYTHPEVASVG 402 (477)
Q Consensus 327 gl~~~~~g~i~vd~-~l~t~~~~vya~GD~~~~~~~~~~A~~~g~~aa~~i~~~~---~~~~~~~~p~~~~~~~~~~~~G 402 (477)
|++++++|+|.||+ ++||+.|+|||+|||++.+.++..|+.||+.||.+|.+.. ...++...|.+.|+.|+++.++
T Consensus 453 gl~~~~~G~I~vd~~~~~Ts~~~VfA~GD~~~~~~~~~~A~~~G~~aA~~i~~~L~~~~~~~~~~~~~~p~~~~ev~~v~ 532 (1025)
T 1gte_A 453 PIKFNRWDLPEVDPETMQTSEPWVFAGGDIVGMANTTVESVNDGKQASWYIHKYIQAQYGASVSAKPELPLFYTPVDLVD 532 (1025)
T ss_dssp TSCBCTTSSBCCCTTTCBCSSTTEEECSGGGCSCCCHHHHHHHHHHHHHHHHHHHHHHTTCCCCSSCCBCCCCCGGGGCC
T ss_pred CceECCCCCEEECCCCCccCCCCEEEeCCCCCCchHHHHHHHHHHHHHHHHHHHHHhccCCCcccCcCcccccccccccc
Confidence 88888889999997 8999999999999999999999999999999999997421 1123444455556665444444
Q ss_pred C
Q 011787 403 K 403 (477)
Q Consensus 403 ~ 403 (477)
+
T Consensus 533 l 533 (1025)
T 1gte_A 533 I 533 (1025)
T ss_dssp C
T ss_pred c
Confidence 3
No 71
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=100.00 E-value=3.5e-36 Score=299.94 Aligned_cols=282 Identities=24% Similarity=0.325 Sum_probs=203.5
Q ss_pred CCCCcEEEECCChHHHHHHHHHHHCCCeEEEEecCCCCCceeeccCccCchhhhhhhHHHHHHHhhhhhCCccccccccC
Q 011787 41 SDENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSVEVD 120 (477)
Q Consensus 41 ~~~~dvvIIGgG~AGl~aA~~l~~~g~~V~lie~~~~~GG~~~~~~~~p~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~~ 120 (477)
...+||+||||||||++||..|++.|++|+|||+.+.+||.+.+ + +|... .+
T Consensus 120 ~~~~~V~IIGgGpAGl~aA~~L~~~G~~V~v~e~~~~~GG~l~~-g-ip~~~--------------------------~~ 171 (456)
T 2vdc_G 120 ELGLSVGVIGAGPAGLAAAEELRAKGYEVHVYDRYDRMGGLLVY-G-IPGFK--------------------------LE 171 (456)
T ss_dssp SCCCCEEEECCSHHHHHHHHHHHHHTCCEEEECSSSSCSTHHHH-T-SCTTT--------------------------SC
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHCCCeEEEEeccCCCCCeeee-c-CCCcc--------------------------CC
Confidence 35689999999999999999999999999999998889986422 1 22110 00
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhhhCCeEEEEeEEEEecCCEEEEEecCCceEEEEecEEEEccCCCC-C--CCCCCccC
Q 011787 121 LPAMMAQKDKAVSNLTRGIEGLFKKNKVTYVKGYGKFISPSEVSVDTIEGGNTVVKGKNIIIATGSDV-K--SLPGITID 197 (477)
Q Consensus 121 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~v~~~~g~~~~i~~d~lvlAtG~~~-~--~~~g~~~~ 197 (477)
.. +.....+++++.+++++.++.. .. .+...++ .+.||+||||||+.+ + .+||..
T Consensus 172 -~~-----------~~~~~~~~l~~~gv~~~~~~~v--~~---~v~~~~~---~~~~d~vvlAtG~~~~~~~~ipG~~-- 229 (456)
T 2vdc_G 172 -KS-----------VVERRVKLLADAGVIYHPNFEV--GR---DASLPEL---RRKHVAVLVATGVYKARDIKAPGSG-- 229 (456)
T ss_dssp -HH-----------HHHHHHHHHHHTTCEEETTCCB--TT---TBCHHHH---HSSCSEEEECCCCCEECCTTCSCCT--
T ss_pred -HH-----------HHHHHHHHHHHCCcEEEeCCEe--cc---EEEhhHh---HhhCCEEEEecCCCCCCCCCCCCCc--
Confidence 00 1112234556678888766432 11 1222222 256999999999974 3 344443
Q ss_pred CceEecchhhhc------------------ccCCCCeeEEEcccHHHHHHHHHHHHcCC-cEEEEEeCCCc-CCCCCHHH
Q 011787 198 EKRIVSSTGALA------------------LNEVPKKLVVIGAGYIGLEMGSVWARLGS-EVTVVEFAADI-VPSMDGEI 257 (477)
Q Consensus 198 ~~~~~~~~~~~~------------------~~~~~~~v~IiG~G~~g~e~a~~l~~~g~-~Vtli~~~~~~-~~~~~~~~ 257 (477)
...+++..+++. ....+++|+|||+|.+|+|+|..+.+.|. +|++++|++.. +|..+.+
T Consensus 230 ~~gv~~a~~~l~~~~~~~~~~~~~~~~~g~~~~~gk~VvVIGgG~~a~d~A~~~~r~Ga~~Vtiv~r~~~~~~p~~~~e- 308 (456)
T 2vdc_G 230 LGNIVAALDYLTTSNKVSLGDTVEAYENGSLNAAGKHVVVLGGGDTAMDCVRTAIRQGATSVKCLYRRDRKNMPGSQRE- 308 (456)
T ss_dssp TTTEEEHHHHHHHHHHHHCTTTCSSCCTTCSCCCCSEEEEECSSHHHHHHHHHHHHTTCSEEEEECSSCSTTCSSCHHH-
T ss_pred CCCcEEHHHHHHHhhhhhcccccccccccccccCCCEEEEECCChhHHHHHHHHHHcCCCEEEEEEeCCccCCCCCHHH-
Confidence 334554433211 12458999999999999999999999998 59999998876 6655443
Q ss_pred HHHHHHHHHhcCcEEEeCceEEEEEEcCCeEE-EEEee------cC---------CCceEEEEcCEEEEeecCCCCCCCC
Q 011787 258 RKQFQRSLEKQKMKFMLKTKVVGVDLSGDGVK-LTLEP------AA---------GGEKTILEADVVLVSAGRTPFTAGL 321 (477)
Q Consensus 258 ~~~~~~~l~~~gv~~~~~~~v~~i~~~~~~~~-v~~~~------~~---------~~~~~~i~~D~vi~a~G~~p~~~~l 321 (477)
.+.+++.||++++++.++++..+ +.+. +++.. .. +++..++++|.||+|+|+.|+...+
T Consensus 309 ----~~~~~~~Gv~~~~~~~~~~i~~~-g~v~~v~~~~~~~~~~d~~G~~~~~~~~g~~~~i~aD~Vi~A~G~~p~~~~~ 383 (456)
T 2vdc_G 309 ----VAHAEEEGVEFIWQAAPEGFTGD-TVVTGVRAVRIHLGVADATGRQTPQVIEGSEFTVQADLVIKALGFEPEDLPN 383 (456)
T ss_dssp ----HHHHHHTTCEEECCSSSCCEEEE-EEEETTEEEEEEEEEEEECTTCCEEEEEEEEEEEECSEEEECSCEECCCHHH
T ss_pred ----HHHHHHCCCEEEeCCCceEEeCC-CcEEEEEEEEEEecccCCcCCccccccCCcEEEEECCEEEECCCCCCCcchh
Confidence 24567789999999998888753 3321 22210 00 2334689999999999999987521
Q ss_pred CccccceeecCCCCeecCCC-CCCCCCCeEEecccCCCCCchhHHHHHHHHHHHHHcC
Q 011787 322 GLDKIGVETDKMGRIPVNER-FATNIPGVYAIGDVIPGPMLAHKAEEDGVACVEFLAG 378 (477)
Q Consensus 322 ~~~~~gl~~~~~g~i~vd~~-l~t~~~~vya~GD~~~~~~~~~~A~~~g~~aa~~i~~ 378 (477)
.++..+++++++|+|.||++ ++|+.|+|||+|||+.++.++..|+.||+.||.+|..
T Consensus 384 ~l~~~gl~~~~~G~i~vd~~~~~Ts~~~VfA~GD~~~g~~~v~~A~~~G~~aA~~i~~ 441 (456)
T 2vdc_G 384 AFDEPELKVTRWGTLLVDHRTKMTNMDGVFAAGDIVRGASLVVWAIRDGRDAAEGIHA 441 (456)
T ss_dssp HHHSTTSCBCTTSSBCCCTTTCBCSSTTEEECGGGGSSCCSHHHHHHHHHHHHHHHHH
T ss_pred hcccCCeeECCCCCEEECCCCCcCCCCCEEEeccccCCchHHHHHHHHHHHHHHHHHH
Confidence 16778899999999999998 9999999999999999999999999999999999974
No 72
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=100.00 E-value=1.3e-34 Score=283.25 Aligned_cols=311 Identities=14% Similarity=0.198 Sum_probs=210.9
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCC-eEEEEecCCCCCceeeccCccCchhhhhhhHHHHHHHhhhhhCCc-cccccccC
Q 011787 43 ENDVVVIGGGPGGYVAAIKAAQLGL-KTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGV-KFSSVEVD 120 (477)
Q Consensus 43 ~~dvvIIGgG~AGl~aA~~l~~~g~-~V~lie~~~~~GG~~~~~~~~p~~~l~~~~~~~~~~~~~~~~~g~-~~~~~~~~ 120 (477)
++||+|||||+||+++|.+|++.|. +|+|||+++ +||.|.++..... ++.... ....+++ .......+
T Consensus 4 ~~~vvIIGaG~aGl~aA~~l~~~g~~~v~lie~~~-~Gg~~~~~~~~~~--~~~~~~-------~~~~~g~~~~~~~~~~ 73 (369)
T 3d1c_A 4 HHKVAIIGAGAAGIGMAITLKDFGITDVIILEKGT-VGHSFKHWPKSTR--TITPSF-------TSNGFGMPDMNAISMD 73 (369)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCCEEEECSSS-TTHHHHTSCTTCB--CSSCCC-------CCGGGTCCCTTCSSTT
T ss_pred cCcEEEECcCHHHHHHHHHHHHcCCCcEEEEecCC-CCCccccCccccc--ccCcch-------hcccCCchhhhhcccc
Confidence 5899999999999999999999999 999999987 9998866432100 000000 0001111 00000011
Q ss_pred hHHHHHHHHH--HHHHHHHHHHHHhhhCCeEEEEeE-EEEecCC--EEEEEecCCceEEEEecEEEEccCCCCC-CCCCC
Q 011787 121 LPAMMAQKDK--AVSNLTRGIEGLFKKNKVTYVKGY-GKFISPS--EVSVDTIEGGNTVVKGKNIIIATGSDVK-SLPGI 194 (477)
Q Consensus 121 ~~~~~~~~~~--~~~~~~~~~~~~~~~~~v~~~~~~-~~~~~~~--~~~v~~~~g~~~~i~~d~lvlAtG~~~~-~~~g~ 194 (477)
+......... ....+...+....++.+++++.++ +..++.. .+.|.+.++ ++.||+||+|||+.+. .+|+
T Consensus 74 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~gv~i~~~~~v~~i~~~~~~~~v~~~~g---~~~~d~vVlAtG~~~~p~ip~- 149 (369)
T 3d1c_A 74 TSPAFTFNEEHISGETYAEYLQVVANHYELNIFENTVVTNISADDAYYTIATTTE---TYHADYIFVATGDYNFPKKPF- 149 (369)
T ss_dssp CCHHHHHCCSSCBHHHHHHHHHHHHHHTTCEEECSCCEEEEEECSSSEEEEESSC---CEEEEEEEECCCSTTSBCCCS-
T ss_pred ccccccccccCCCHHHHHHHHHHHHHHcCCeEEeCCEEEEEEECCCeEEEEeCCC---EEEeCEEEECCCCCCccCCCC-
Confidence 1000000000 001223334455667789888764 5555533 567776665 5899999999999763 3444
Q ss_pred ccCCceEecchhhhcccC-CCCeeEEEcccHHHHHHHHHHHHcCCcEEEEEeCCCcCC-------CCCHHHHHHHHHHHH
Q 011787 195 TIDEKRIVSSTGALALNE-VPKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIVP-------SMDGEIRKQFQRSLE 266 (477)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~-~~~~v~IiG~G~~g~e~a~~l~~~g~~Vtli~~~~~~~~-------~~~~~~~~~~~~~l~ 266 (477)
..+.+..+...... .+++++|||+|.+|+|+|..|++.|.+|+++++.+.+++ .+++...+.+.+.++
T Consensus 150 ----~~~~~~~~~~~~~~~~~~~vvVvG~G~~g~e~a~~l~~~g~~V~lv~~~~~~~~~~~d~~~~~~~~~~~~l~~~l~ 225 (369)
T 3d1c_A 150 ----KYGIHYSEIEDFDNFNKGQYVVIGGNESGFDAAYQLAKNGSDIALYTSTTGLNDPDADPSVRLSPYTRQRLGNVIK 225 (369)
T ss_dssp ----SSCEEGGGCSCGGGSCSSEEEEECCSHHHHHHHHHHHHTTCEEEEECC----------CTTSCCHHHHHHHHHHHH
T ss_pred ----CceechhhcCChhhcCCCEEEEECCCcCHHHHHHHHHhcCCeEEEEecCCCCCCCCCCCCccCCHHHHHHHHHHHh
Confidence 22334444433333 357999999999999999999999999999999887763 255777888999999
Q ss_pred hcC-cEEEeCceEEEEEEcCCeEEEEEeecCCCceEEE-EcCEEEEeecCCCCCCCCCccccceeecCCCCeecCCC-CC
Q 011787 267 KQK-MKFMLKTKVVGVDLSGDGVKLTLEPAAGGEKTIL-EADVVLVSAGRTPFTAGLGLDKIGVETDKMGRIPVNER-FA 343 (477)
Q Consensus 267 ~~g-v~~~~~~~v~~i~~~~~~~~v~~~~~~~~~~~~i-~~D~vi~a~G~~p~~~~l~~~~~gl~~~~~g~i~vd~~-l~ 343 (477)
+.| |++++++.|.+++.+++...+++. +++.+ .+|.||+|+|++|+.+. +...++. +++|++.||++ ++
T Consensus 226 ~~g~v~~~~~~~v~~i~~~~~~~~v~~~-----~g~~~~~~d~vi~a~G~~~~~~~--~~~~~~~-~~~g~i~v~~~~~~ 297 (369)
T 3d1c_A 226 QGARIEMNVHYTVKDIDFNNGQYHISFD-----SGQSVHTPHEPILATGFDATKNP--IVQQLFV-TTNQDIKLTTHDES 297 (369)
T ss_dssp TTCCEEEECSCCEEEEEEETTEEEEEES-----SSCCEEESSCCEECCCBCGGGSH--HHHHHSC-CTTSCCCBCTTSBB
T ss_pred hCCcEEEecCcEEEEEEecCCceEEEec-----CCeEeccCCceEEeeccCCccch--hhhhhcc-CCCCCEEechhhcc
Confidence 997 999999999999876666666664 33445 46999999999999865 3444566 67788999986 66
Q ss_pred CCCCCeEEecccCCCCC----chhHHHHHHHHHHHHHcCC
Q 011787 344 TNIPGVYAIGDVIPGPM----LAHKAEEDGVACVEFLAGK 379 (477)
Q Consensus 344 t~~~~vya~GD~~~~~~----~~~~A~~~g~~aa~~i~~~ 379 (477)
|++|+|||+|||+..+. ....+.+||+++|++|.+.
T Consensus 298 t~~~~v~a~GD~~~~~~~~~~~~~~~~~~a~~~a~~l~~~ 337 (369)
T 3d1c_A 298 TRYPNIFMIGATVENDNAKLCYIYKFRARFAVLAHLLTQR 337 (369)
T ss_dssp SSSTTEEECSTTCCCSSCCCCSHHHHGGGHHHHHHHHHHH
T ss_pred cCCCCeEEeccccccCCeeEEEEehhhHHHHHHHHHHhcc
Confidence 99999999999996543 2346778899999999864
No 73
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=100.00 E-value=4.3e-34 Score=278.07 Aligned_cols=303 Identities=16% Similarity=0.156 Sum_probs=201.5
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCeEEEEecCCCCCceeeccCccCchhhhhhhHHHHHHHhhhhhCCccccccccChH
Q 011787 43 ENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSVEVDLP 122 (477)
Q Consensus 43 ~~dvvIIGgG~AGl~aA~~l~~~g~~V~lie~~~~~GG~~~~~~~~p~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 122 (477)
++||+|||||++|+++|..|++.|++|+|||+++.+||.|.+. .|...+...... ..+..+........+..
T Consensus 3 ~~~vvIIG~G~aGl~~A~~l~~~g~~v~vie~~~~~gg~~~~~--~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~- 74 (357)
T 4a9w_A 3 SVDVVVIGGGQSGLSAGYFLRRSGLSYVILDAEASPGGAWQHA--WHSLHLFSPAGW-----SSIPGWPMPASQGPYPA- 74 (357)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHSSCCEEEECCSSSSSGGGGGS--CTTCBCSSCGGG-----SCCSSSCCCCCSSSSCB-
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCCCcccCC--CCCcEecCchhh-----hhCCCCCCCCCccCCCC-
Confidence 5899999999999999999999999999999999999988652 232221111110 00111111100001110
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhCCeEEEEe-EEEEe--cCCEEE-EEecCCceEEEEecEEEEccCC--CC--CCCCCC
Q 011787 123 AMMAQKDKAVSNLTRGIEGLFKKNKVTYVKG-YGKFI--SPSEVS-VDTIEGGNTVVKGKNIIIATGS--DV--KSLPGI 194 (477)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-~~~~~--~~~~~~-v~~~~g~~~~i~~d~lvlAtG~--~~--~~~~g~ 194 (477)
...+...+....++.++++..+ .+..+ +.+.+. |.+.++ ++.||+||+|||. .| +.+|+.
T Consensus 75 ---------~~~~~~~l~~~~~~~~~~~~~~~~v~~i~~~~~~~~~v~~~~g---~~~~d~vV~AtG~~~~~~~~~~~g~ 142 (357)
T 4a9w_A 75 ---------RAEVLAYLAQYEQKYALPVLRPIRVQRVSHFGERLRVVARDGR---QWLARAVISATGTWGEAYTPEYQGL 142 (357)
T ss_dssp ---------HHHHHHHHHHHHHHTTCCEECSCCEEEEEEETTEEEEEETTSC---EEEEEEEEECCCSGGGBCCCCCTTG
T ss_pred ---------HHHHHHHHHHHHHHcCCEEEcCCEEEEEEECCCcEEEEEeCCC---EEEeCEEEECCCCCCCCCCCCCCCc
Confidence 0122333445566678887765 44444 345666 777665 7999999999995 44 344554
Q ss_pred ccCCceEecchhh-hcccCCCCeeEEEcccHHHHHHHHHHHHcCCcEEEEEeC-CCcCCCC--CHHHHHHHHHHHH----
Q 011787 195 TIDEKRIVSSTGA-LALNEVPKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFA-ADIVPSM--DGEIRKQFQRSLE---- 266 (477)
Q Consensus 195 ~~~~~~~~~~~~~-~~~~~~~~~v~IiG~G~~g~e~a~~l~~~g~~Vtli~~~-~~~~~~~--~~~~~~~~~~~l~---- 266 (477)
........+..+. ......+++++|||+|.+|+|+|..|++.+ +|+++.+. +.+++.. ...+.+.+.+.+.
T Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~v~VvG~G~~g~e~a~~l~~~~-~v~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (357)
T 4a9w_A 143 ESFAGIQLHSAHYSTPAPFAGMRVAIIGGGNSGAQILAEVSTVA-ETTWITQHEPAFLADDVDGRVLFERATERWKAQQE 221 (357)
T ss_dssp GGCCSEEEEGGGCCCSGGGTTSEEEEECCSHHHHHHHHHHTTTS-EEEEECSSCCCBCCTTCCTHHHHTC----------
T ss_pred cccCCcEEEeccCCChhhcCCCEEEEECCCcCHHHHHHHHHhhC-CEEEEECCCCeecchhhcCccHHHHHHHHHhcccc
Confidence 4222233333332 223335799999999999999999999998 69999988 4555532 3344333333332
Q ss_pred ------------------------hcCcEEEeCceEEEEEEcCCeEEEEEeecCCCceEEEEcCEEEEeecCCCCCCCCC
Q 011787 267 ------------------------KQKMKFMLKTKVVGVDLSGDGVKLTLEPAAGGEKTILEADVVLVSAGRTPFTAGLG 322 (477)
Q Consensus 267 ------------------------~~gv~~~~~~~v~~i~~~~~~~~v~~~~~~~~~~~~i~~D~vi~a~G~~p~~~~l~ 322 (477)
+.|+ +..+..+.+++ .+. +.+. +++++++|.|++|+|++|++++
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~-i~~~~~v~~~~--~~~--v~~~-----~g~~i~~D~vi~a~G~~p~~~~-- 289 (357)
T 4a9w_A 222 GREPDLPPGGFGDIVMVPPVLDARARGV-LAAVPPPARFS--PTG--MQWA-----DGTERAFDAVIWCTGFRPALSH-- 289 (357)
T ss_dssp ------------CBCCCHHHHHHHHTTC-CCEECCCSEEE--TTE--EECT-----TSCEEECSEEEECCCBCCCCGG--
T ss_pred ccCCCcccccccCcccChhHHHHHhcCc-eEEecCcceEe--CCe--eEEC-----CCCEecCCEEEECCCcCCCCcc--
Confidence 3343 44455555553 222 3332 5678999999999999999886
Q ss_pred ccccceeecCCCCeecCCC--CCCCCCCeEEec--ccCC-CCCchhHHHHHHHHHHHHHcCC
Q 011787 323 LDKIGVETDKMGRIPVNER--FATNIPGVYAIG--DVIP-GPMLAHKAEEDGVACVEFLAGK 379 (477)
Q Consensus 323 ~~~~gl~~~~~g~i~vd~~--l~t~~~~vya~G--D~~~-~~~~~~~A~~~g~~aa~~i~~~ 379 (477)
+++.++. +++|+|.||++ ++|+.|+|||+| ||+. .+.....|..||+.+|++|...
T Consensus 290 l~~~gl~-~~~G~i~vd~~~l~~t~~~~vya~Gd~d~~~~~~~~~~~A~~~g~~~a~~i~~~ 350 (357)
T 4a9w_A 290 LKGLDLV-TPQGQVEVDGSGLRALAVPSVWLLGYGDWNGMASATLIGVTRYAREAVRQVTAY 350 (357)
T ss_dssp GTTTTCB-CTTSCBCBCTTSCBBSSCTTEEECSSCGGGSTTCSSTTTHHHHHHHHHHHHHHH
T ss_pred cCccccc-CCCCCccccCCcccCCCCCCeEEeccccccccchhhhhhhHHHHHHHHHHHHHH
Confidence 6778888 78899999999 889999999999 6665 5677888999999999999753
No 74
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=100.00 E-value=5.1e-34 Score=284.88 Aligned_cols=289 Identities=20% Similarity=0.257 Sum_probs=207.5
Q ss_pred CCCcEEEECCChHHHHHHHHHHH---CCCeEEEEecCCCCCceeeccCccCchhhhhhhHHHHHHHhhhhhCCccccccc
Q 011787 42 DENDVVVIGGGPGGYVAAIKAAQ---LGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSVE 118 (477)
Q Consensus 42 ~~~dvvIIGgG~AGl~aA~~l~~---~g~~V~lie~~~~~GG~~~~~~~~p~~~l~~~~~~~~~~~~~~~~~g~~~~~~~ 118 (477)
.++||+|||||+||++||..|++ .|.+|+|||+++... ..|..... .. +..
T Consensus 3 ~m~~vvIIGgG~aGl~aA~~L~~~~~~g~~Vtlie~~~~~~-------~~~~~~~~-------------~~-g~~----- 56 (437)
T 3sx6_A 3 GSAHVVILGAGTGGMPAAYEMKEALGSGHEVTLISANDYFQ-------FVPSNPWV-------------GV-GWK----- 56 (437)
T ss_dssp TSCEEEEECCSTTHHHHHHHHHHHHGGGSEEEEECSSSEEE-------CGGGHHHH-------------HH-TSS-----
T ss_pred CCCcEEEECCcHHHHHHHHHHhccCCCcCEEEEEeCCCCCc-------ccCCcccc-------------cc-Ccc-----
Confidence 35799999999999999999999 799999999965321 01111000 00 000
Q ss_pred cChHHHHHHHHHHHHHHHHHHHHHhhhCCeEEEEeEEEEecCCEEEEEecCCceEEEEecEEEEccCCCCC--CCCCCcc
Q 011787 119 VDLPAMMAQKDKAVSNLTRGIEGLFKKNKVTYVKGYGKFISPSEVSVDTIEGGNTVVKGKNIIIATGSDVK--SLPGITI 196 (477)
Q Consensus 119 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~v~~~~g~~~~i~~d~lvlAtG~~~~--~~~g~~~ 196 (477)
+ .+.+...+...+++.+++++.+.+..++.....|.+.++ .++.||+||+|||++|. .+||+..
T Consensus 57 -~-----------~~~~~~~l~~~~~~~gv~~~~~~v~~id~~~~~V~~~~g--~~i~~d~lviAtG~~~~~~~ipG~~~ 122 (437)
T 3sx6_A 57 -E-----------RDDIAFPIRHYVERKGIHFIAQSAEQIDAEAQNITLADG--NTVHYDYLMIATGPKLAFENVPGSDP 122 (437)
T ss_dssp -C-----------HHHHEEECHHHHHTTTCEEECSCEEEEETTTTEEEETTS--CEEECSEEEECCCCEECGGGSTTCST
T ss_pred -C-----------HHHHHHHHHHHHHHCCCEEEEeEEEEEEcCCCEEEECCC--CEEECCEEEECCCCCcCcccCCCCCc
Confidence 0 011112234556678999999999999887767888777 67999999999999884 4677653
Q ss_pred CCc---eEecchhhhcccC------CCCeeEEEcccHHH------HHHH----HHHHHcCCc-----EEEEEeCCCcCC-
Q 011787 197 DEK---RIVSSTGALALNE------VPKKLVVIGAGYIG------LEMG----SVWARLGSE-----VTVVEFAADIVP- 251 (477)
Q Consensus 197 ~~~---~~~~~~~~~~~~~------~~~~v~IiG~G~~g------~e~a----~~l~~~g~~-----Vtli~~~~~~~~- 251 (477)
... .+.+.+++..+.+ .+++++|||+|+.+ +|+| ..+++.|.+ |+++++.+.+.+
T Consensus 123 ~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~vVVGgG~~~g~~G~~~E~a~~la~~l~~~g~~~~~~~Vtlv~~~~~~~~~ 202 (437)
T 3sx6_A 123 HEGPVQSICTVDHAERAFAEYQALLREPGPIVIGAMAGASCFGPAYEYAMIVASDLKKRGMRDKIPSFTFITSEPYIGHL 202 (437)
T ss_dssp TTSSEECCSSHHHHHHHHHHHHHHHHSCCCEEEEECTTCCCCHHHHHHHHHHHHHHHHTTCGGGCSCEEEEESSSSTTCT
T ss_pred ccCcceecccccHHHHHHHHHHHHHhCCCEEEEEcCCCCCcCcHHHHHHHHHHHHHHHcCCcccCcEEEEEcCCcccccc
Confidence 211 3445555443321 14567899986543 7777 666677764 999999887632
Q ss_pred ---CCCHHHHHHHHHHHHhcCcEEEeCceEEEEEEcCCeEEEEEeecCCCc---eEEEEcCEEEEeecCCCCCCCCCccc
Q 011787 252 ---SMDGEIRKQFQRSLEKQKMKFMLKTKVVGVDLSGDGVKLTLEPAAGGE---KTILEADVVLVSAGRTPFTAGLGLDK 325 (477)
Q Consensus 252 ---~~~~~~~~~~~~~l~~~gv~~~~~~~v~~i~~~~~~~~v~~~~~~~~~---~~~i~~D~vi~a~G~~p~~~~l~~~~ 325 (477)
.+ ++....+++.++++||++++++.|++++. +++.+.... .++. +.++++|.+++++|..|+... .+.
T Consensus 203 ~l~~~-~~~~~~~~~~l~~~gI~~~~~~~v~~v~~--~~v~~~~~~-~~g~~~~~~~i~~D~vv~~~g~~~~~~~--~~~ 276 (437)
T 3sx6_A 203 GIQGV-GDSKGILTKGLKEEGIEAYTNCKVTKVED--NKMYVTQVD-EKGETIKEMVLPVKFGMMIPAFKGVPAV--AGV 276 (437)
T ss_dssp TTTCC-TTHHHHHHHHHHHTTCEEECSEEEEEEET--TEEEEEEEC-TTSCEEEEEEEECSEEEEECCEECCHHH--HTS
T ss_pred ccCcc-hHHHHHHHHHHHHCCCEEEcCCEEEEEEC--CeEEEEecc-cCCccccceEEEEeEEEEcCCCcCchhh--hcc
Confidence 23 35788899999999999999999999953 444443211 1122 678999999999998887543 233
Q ss_pred cceeecCCCCeecCCCCCC-CCCCeEEecccCCC------------CCchhHHHHHHHHHHHHHc
Q 011787 326 IGVETDKMGRIPVNERFAT-NIPGVYAIGDVIPG------------PMLAHKAEEDGVACVEFLA 377 (477)
Q Consensus 326 ~gl~~~~~g~i~vd~~l~t-~~~~vya~GD~~~~------------~~~~~~A~~~g~~aa~~i~ 377 (477)
.++ .+++|+|.||+++|| ++|||||+|||+.. |.++..|..||+.+|+||.
T Consensus 277 ~gl-~~~~G~i~Vd~~l~t~~~~~Ifa~GD~~~~~~~~~~~~~~~~pk~~~~A~~qg~~aA~ni~ 340 (437)
T 3sx6_A 277 EGL-CNPGGFVLVDEHQRSKKYANIFAAGIAIAIPPVETTPVPTGAPKTGYMIESMVSAAVHNIK 340 (437)
T ss_dssp TTT-BCTTSCBCBCTTSBBSSCTTEEECGGGBCCCCSCCCSSCCCCCCCHHHHHHHHHHHHHHHH
T ss_pred ccc-cCCCCcEEeChhccCCCCCCEEEEEEEeccCCcCCCcCCCCCCcHHHHHHHHHHHHHHHHH
Confidence 466 577899999999998 99999999999963 5688999999999999997
No 75
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=100.00 E-value=4.5e-34 Score=284.38 Aligned_cols=287 Identities=22% Similarity=0.277 Sum_probs=202.6
Q ss_pred CcEEEECCChHHHHHHHHHHHCC--CeEEEEecCCCCCceeeccCccCchhhhhhhHHHHHHHhhhhhCCccccccccCh
Q 011787 44 NDVVVIGGGPGGYVAAIKAAQLG--LKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSVEVDL 121 (477)
Q Consensus 44 ~dvvIIGgG~AGl~aA~~l~~~g--~~V~lie~~~~~GG~~~~~~~~p~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 121 (477)
++|||||||+||++||.+|++.+ .+|+|||+++... ..|.. +. ........++...++
T Consensus 3 K~VvIIGgG~aGl~aA~~L~~~~~~~~VtlI~~~~~~~-------~~p~l--------~~-----v~~g~~~~~~i~~~~ 62 (430)
T 3hyw_A 3 KHVVVIGGGVGGIATAYNLRNLMPDLKITLISDRPYFG-------FTPAF--------PH-----LAMGWRKFEDISVPL 62 (430)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCTTCEEEEECSSSEEE-------CGGGH--------HH-----HHHTCSCGGGSEEES
T ss_pred CcEEEECCCHHHHHHHHHHhccCcCCeEEEEcCCCCCc-------cCccH--------HH-----HhcCCCCHHHhhhcH
Confidence 47999999999999999999864 7999999965320 01111 00 111111122222221
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhCCeEEEEeEEEEecCCEEEEEecCCceEEEEecEEEEccCCCC-CCCCCCccCCce
Q 011787 122 PAMMAQKDKAVSNLTRGIEGLFKKNKVTYVKGYGKFISPSEVSVDTIEGGNTVVKGKNIIIATGSDV-KSLPGITIDEKR 200 (477)
Q Consensus 122 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~v~~~~g~~~~i~~d~lvlAtG~~~-~~~~g~~~~~~~ 200 (477)
..++++.+++++.+++..+|.+..+|.+++| +++.||+||||||+++ +.+||.......
T Consensus 63 ------------------~~~~~~~gv~~i~~~v~~Id~~~~~V~~~~g--~~i~YD~LViAtG~~~~~~i~G~~e~~~~ 122 (430)
T 3hyw_A 63 ------------------APLLPKFNIEFINEKAESIDPDANTVTTQSG--KKIEYDYLVIATGPKLVFGAEGQEENSTS 122 (430)
T ss_dssp ------------------TTTGGGGTEEEECSCEEEEETTTTEEEETTC--CEEECSEEEECCCCEEECCSBTHHHHSCC
T ss_pred ------------------HHHHHHCCcEEEEeEEEEEECCCCEEEECCC--CEEECCEEEEeCCCCccCCccCcccCcCC
Confidence 2345667999999999999998889999888 7899999999999976 345665433445
Q ss_pred EecchhhhcccC------CCCeeEEEcccH------HHHHH----HHHHHHcC----CcEEEEEeCCCcC---CCCCHHH
Q 011787 201 IVSSTGALALNE------VPKKLVVIGAGY------IGLEM----GSVWARLG----SEVTVVEFAADIV---PSMDGEI 257 (477)
Q Consensus 201 ~~~~~~~~~~~~------~~~~v~IiG~G~------~g~e~----a~~l~~~g----~~Vtli~~~~~~~---~~~~~~~ 257 (477)
+.+.+++..+.+ ..+.++|+|++. .+.|+ +..+.+.+ .+|++++..+.+. +..++..
T Consensus 123 ~~~~~~a~~~~~~l~~~~~~~~~vv~gg~~gve~~~~~~e~a~~~~~~l~~~g~~~~v~v~~~~~~~~l~~~~~~~~~~~ 202 (430)
T 3hyw_A 123 ICTAEHALETQKKLQELYANPGPVVIGAIPGVSCFGPAYEFALMLHYELKKRGIRYKVPMTFITSEPYLGHFGVGGIGAS 202 (430)
T ss_dssp CSSHHHHHHHHHHHHHHHHSCCCEEEEECTTCCCCHHHHHHHHHHHHHHHHTTCGGGCCEEEECSSSSTTCTTTTCSTTH
T ss_pred cccHHHHHHHHHHHHhhccCCceEEEeCCCcEEEhHHHHHHHHHHHHHHHHhcccccceeeeecccchhhhccchhhHHH
Confidence 566666544322 134455565542 22343 34455555 4688887766543 3456678
Q ss_pred HHHHHHHHHhcCcEEEeCceEEEEEEcCCeEEEEEeecCCCceEEEEcCEEEEeecCCCCCCCCCccccc--eeecCCCC
Q 011787 258 RKQFQRSLEKQKMKFMLKTKVVGVDLSGDGVKLTLEPAAGGEKTILEADVVLVSAGRTPFTAGLGLDKIG--VETDKMGR 335 (477)
Q Consensus 258 ~~~~~~~l~~~gv~~~~~~~v~~i~~~~~~~~v~~~~~~~~~~~~i~~D~vi~a~G~~p~~~~l~~~~~g--l~~~~~g~ 335 (477)
.+.+++.++++||++++++.|++++ ++++.+.. .+++++++++|.+++++|.+|+.. +...+ +..+.+|+
T Consensus 203 ~~~l~~~l~~~GV~~~~~~~v~~v~--~~~~~~~~---~~g~~~~i~~d~vi~~~G~~~~~~---~~~~~~~l~~~~~g~ 274 (430)
T 3hyw_A 203 KRLVEDLFAERNIDWIANVAVKAIE--PDKVIYED---LNGNTHEVPAKFTMFMPSFQGPEV---VASAGDKVANPANKM 274 (430)
T ss_dssp HHHHHHHHHHTTCEEECSCEEEEEC--SSEEEEEC---TTSCEEEEECSEEEEECEEECCHH---HHTTCTTTBCTTTCC
T ss_pred HHHHHHHHHhCCeEEEeCceEEEEe--CCceEEEe---eCCCceEeecceEEEeccCCCchH---HHhcccccccCCceE
Confidence 8889999999999999999999994 44544432 345678999999999999999753 33333 44455678
Q ss_pred eecCCCCC-CCCCCeEEecccCCC------------CCchhHHHHHHHHHHHHHcC
Q 011787 336 IPVNERFA-TNIPGVYAIGDVIPG------------PMLAHKAEEDGVACVEFLAG 378 (477)
Q Consensus 336 i~vd~~l~-t~~~~vya~GD~~~~------------~~~~~~A~~~g~~aa~~i~~ 378 (477)
|.||++|| |++|||||+|||+.. |.+++.|.+||+++|+||+.
T Consensus 275 i~vd~~lq~t~~~~IfAiGD~a~~p~~~~~~~~~~~pk~a~~A~~qg~~~A~Ni~~ 330 (430)
T 3hyw_A 275 VIVNRCFQNPTYKNIFGVGVVTAIPPIEKTPIPTGVPKTGMMIEQMAMAVAHNIVN 330 (430)
T ss_dssp BCCCTTSBCSSSTTEEECSTTBCCCCSSCCSSCCCCCCCHHHHHHHHHHHHHHHHH
T ss_pred EEecccccCCCCCCEEEeccEEecCCcccCcCcCccchHHHHHHHHHHHHHHHHHH
Confidence 99999999 999999999999853 45788999999999999973
No 76
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=100.00 E-value=3.5e-33 Score=278.76 Aligned_cols=281 Identities=18% Similarity=0.276 Sum_probs=201.3
Q ss_pred CCcEEEECCChHHHHHHHHHHH-C------CCeEEEEecCCCCCceeeccCccCchhhhhhhHHHHHHHhhhhhCCcccc
Q 011787 43 ENDVVVIGGGPGGYVAAIKAAQ-L------GLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFS 115 (477)
Q Consensus 43 ~~dvvIIGgG~AGl~aA~~l~~-~------g~~V~lie~~~~~GG~~~~~~~~p~~~l~~~~~~~~~~~~~~~~~g~~~~ 115 (477)
.+||+||||||||++||..|++ . |.+|+|||+.+.+||.| +.++.|.+....
T Consensus 3 ~~~VvIIG~G~aGl~aA~~L~~~~~~~~~~g~~V~lie~~~~~gg~~-~~gv~p~~~~~~-------------------- 61 (456)
T 1lqt_A 3 PYYIAIVGSGPSAFFAAASLLKAADTTEDLDMAVDMLEMLPTPWGLV-RSGVAPDHPKIK-------------------- 61 (456)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHHHHSTTCCEEEEEEESSSSCSTHH-HHTSCTTCTGGG--------------------
T ss_pred CCEEEEECcCHHHHHHHHHHHhhCccccCCCCeEEEEecCCCCCCcc-ccccCCCCCCHH--------------------
Confidence 5799999999999999999999 7 89999999988899887 445555422110
Q ss_pred ccccChHHHHHHHHHHHHHHHHHHHHHhhhCCeEEEEeEEEEecCCEEEEEecCCceEEEEecEEEEccCCC-CC--CCC
Q 011787 116 SVEVDLPAMMAQKDKAVSNLTRGIEGLFKKNKVTYVKGYGKFISPSEVSVDTIEGGNTVVKGKNIIIATGSD-VK--SLP 192 (477)
Q Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~v~~~~g~~~~i~~d~lvlAtG~~-~~--~~~ 192 (477)
.+...+...+++.+++++.+.. ++. .|.+.++ .+.||+||||||+. ++ .+|
T Consensus 62 ------------------~~~~~~~~~~~~~~v~~~~~v~--v~~---~v~~~~~---~~~~d~lViAtG~~~~~~~~ip 115 (456)
T 1lqt_A 62 ------------------SISKQFEKTAEDPRFRFFGNVV--VGE---HVQPGEL---SERYDAVIYAVGAQSDRMLNIP 115 (456)
T ss_dssp ------------------GGHHHHHHHHTSTTEEEEESCC--BTT---TBCHHHH---HHHSSEEEECCCCCEECCCCCT
T ss_pred ------------------HHHHHHHHHHhcCCCEEEeeEE--ECC---EEEECCC---eEeCCEEEEeeCCCCCCCCCCC
Confidence 0111223445567888876622 221 2333333 47899999999997 43 345
Q ss_pred CCccCCceEecchhhh-----------cccC-CCCeeEEEcccHHHHHHHHHHHHc--------------------C-Cc
Q 011787 193 GITIDEKRIVSSTGAL-----------ALNE-VPKKLVVIGAGYIGLEMGSVWARL--------------------G-SE 239 (477)
Q Consensus 193 g~~~~~~~~~~~~~~~-----------~~~~-~~~~v~IiG~G~~g~e~a~~l~~~--------------------g-~~ 239 (477)
|.+ ...+++..++. .+.. .+++++|||+|++|+|+|..|++. | .+
T Consensus 116 G~~--~~gv~~~~~~~~~~~~~~d~~~~~~~~~~~~vvVIG~G~~g~e~A~~L~~~~~~l~~tdi~~~~~~~l~~~g~~~ 193 (456)
T 1lqt_A 116 GED--LPGSIAAVDFVGWYNAHPHFEQVSPDLSGARAVVIGNGNVALDVARILLTDPDVLARTDIADHALESLRPRGIQE 193 (456)
T ss_dssp TTT--STTEEEHHHHHHHHTTCGGGTTCCCCCCSSEEEEECCSHHHHHHHHHHHSCHHHHTTSCCCHHHHHHHTTCCCCE
T ss_pred CCC--CCCcEEHHHHHhhhhcCcccccchhhcCCCEEEEECCCHHHHHHHHHHHhhhhhhcCCCccHHHHHHHHHCCCcE
Confidence 544 33466665542 2221 478999999999999999999874 5 48
Q ss_pred EEEEEeCCCcCCCCCH-------------------HH------------------HHHHHHHHHh------cCcEEEeCc
Q 011787 240 VTVVEFAADIVPSMDG-------------------EI------------------RKQFQRSLEK------QKMKFMLKT 276 (477)
Q Consensus 240 Vtli~~~~~~~~~~~~-------------------~~------------------~~~~~~~l~~------~gv~~~~~~ 276 (477)
|+++.|++.+.+.+.+ ++ .+.+.+.+++ +||++++++
T Consensus 194 V~lv~r~~~~~~~f~~~elrel~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~gv~i~~~~ 273 (456)
T 1lqt_A 194 VVIVGRRGPLQAAFTTLELRELADLDGVDVVIDPAELDGITDEDAAAVGKVCKQNIKVLRGYADREPRPGHRRMVFRFLT 273 (456)
T ss_dssp EEEECSSCGGGCCCCHHHHHHGGGCTTEEEECCGGGGTTCCHHHHHHHCHHHHHHHHHHHHHHTCC-CTTSEEEEEECSE
T ss_pred EEEEecCChhhhccChHHHHHhhcCCCceeeeChHHhccchhhhhhhccHHHHHHHHHHHHHhhcCCCCCCceEEEEeCC
Confidence 9999998876543321 11 2344455555 799999999
Q ss_pred eEEEEEEcCCeEEEEEeec-------------CCCceEEEEcCEEEEeecCCCCCCCCCccccceeecCCCCeecCCCCC
Q 011787 277 KVVGVDLSGDGVKLTLEPA-------------AGGEKTILEADVVLVSAGRTPFTAGLGLDKIGVETDKMGRIPVNERFA 343 (477)
Q Consensus 277 ~v~~i~~~~~~~~v~~~~~-------------~~~~~~~i~~D~vi~a~G~~p~~~~l~~~~~gl~~~~~g~i~vd~~l~ 343 (477)
.+.++..++....+++... .+++.++++||.|++|+|++|+.. .+++++++|++.+|+++|
T Consensus 274 ~~~~i~~~~~v~~v~~~~~~~~~~~~~~~~~~~~g~~~~i~~d~vi~a~G~~p~~l------~gl~~d~~g~i~vn~~~r 347 (456)
T 1lqt_A 274 SPIEIKGKRKVERIVLGRNELVSDGSGRVAAKDTGEREELPAQLVVRSVGYRGVPT------PGLPFDDQSGTIPNVGGR 347 (456)
T ss_dssp EEEEEECSSSCCEEEEEEEEEEECSSSSEEEEEEEEEEEEECSEEEECSCEECCCC------TTSCCBTTTTBCCEETTE
T ss_pred CCeEEecCCcEeEEEEEEEEecCCCcccccccCCCceEEEEcCEEEEccccccCCC------CCCcccCCCCeeECCCCc
Confidence 9999986533212333210 112335799999999999999872 357778889999999999
Q ss_pred -CCCCCeEEecccCCCCC-chhHHHHHHHHHHHHHcC
Q 011787 344 -TNIPGVYAIGDVIPGPM-LAHKAEEDGVACVEFLAG 378 (477)
Q Consensus 344 -t~~~~vya~GD~~~~~~-~~~~A~~~g~~aa~~i~~ 378 (477)
|+.|+|||+|||+.+|. ....|+.+|..+|.+|+.
T Consensus 348 vt~~pgvya~GD~~~gp~~~i~~a~~~g~~~a~~i~~ 384 (456)
T 1lqt_A 348 INGSPNEYVVGWIKRGPTGVIGTNKKDAQDTVDTLIK 384 (456)
T ss_dssp ETTCSSEEECTHHHHCSCSCTTHHHHHHHHHHHHHHH
T ss_pred CCCCCCEEEEeccCCCCchhHHHHHHHHHHHHHHHHH
Confidence 89999999999997776 566899999999999974
No 77
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=100.00 E-value=4.7e-33 Score=275.83 Aligned_cols=284 Identities=19% Similarity=0.214 Sum_probs=206.9
Q ss_pred CcEEEECCChHHHHHHHHHHH---CCCeEEEEecCCCCCceeeccCccCchhhhhhhHHHHHHHhhhhhCCccccccccC
Q 011787 44 NDVVVIGGGPGGYVAAIKAAQ---LGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSVEVD 120 (477)
Q Consensus 44 ~dvvIIGgG~AGl~aA~~l~~---~g~~V~lie~~~~~GG~~~~~~~~p~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~~ 120 (477)
+||+|||||+||+++|..|++ .|.+|+|||+++.++.. .+.+.. ..........
T Consensus 2 ~~VvIIGgG~aGl~aA~~L~~~~~~g~~V~vie~~~~~~~~----~~~~~~----------------~~~~~~~~~~--- 58 (409)
T 3h8l_A 2 TKVLVLGGRFGALTAAYTLKRLVGSKADVKVINKSRFSYFR----PALPHV----------------AIGVRDVDEL--- 58 (409)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHHGGGSEEEEEESSSEEEEC----CSSCCC----------------CSSCCCCCCE---
T ss_pred CeEEEECCCHHHHHHHHHHHhhCCCCCeEEEEeCCCCceec----cchhhc----------------ccCCcCHHHH---
Confidence 589999999999999999999 89999999997644221 111100 0000001111
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhhhCCeEEEEeEEEEecCCEEEEEecCC--ceEEEEecEEEEccCCCCC--CCCCCcc
Q 011787 121 LPAMMAQKDKAVSNLTRGIEGLFKKNKVTYVKGYGKFISPSEVSVDTIEG--GNTVVKGKNIIIATGSDVK--SLPGITI 196 (477)
Q Consensus 121 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~v~~~~g--~~~~i~~d~lvlAtG~~~~--~~~g~~~ 196 (477)
...+...+++.+++++.+++..++.+...|.+.++ ...++.||+||+|||++|. .+||+..
T Consensus 59 ---------------~~~~~~~~~~~gv~~~~~~v~~i~~~~~~V~~~~g~~~~~~~~~d~lViAtG~~~~~~~ipG~~~ 123 (409)
T 3h8l_A 59 ---------------KVDLSEALPEKGIQFQEGTVEKIDAKSSMVYYTKPDGSMAEEEYDYVIVGIGAHLATELVKGWDK 123 (409)
T ss_dssp ---------------EEEHHHHTGGGTCEEEECEEEEEETTTTEEEEECTTSCEEEEECSEEEECCCCEECGGGSBTHHH
T ss_pred ---------------HHHHHHHHhhCCeEEEEeeEEEEeCCCCEEEEccCCcccceeeCCEEEECCCCCcCccCCCChhh
Confidence 11123455667999999988888766444554444 3356999999999999875 3566543
Q ss_pred CCceEecchhhhcccC----CCCeeEEEcccH-------------------------HHHHHH----HHHHHcCC----c
Q 011787 197 DEKRIVSSTGALALNE----VPKKLVVIGAGY-------------------------IGLEMG----SVWARLGS----E 239 (477)
Q Consensus 197 ~~~~~~~~~~~~~~~~----~~~~v~IiG~G~-------------------------~g~e~a----~~l~~~g~----~ 239 (477)
....+.+.++...+.. ..++++|||+|. .++|+| ..+++.|. +
T Consensus 124 ~~~~~~~~~~~~~~~~~l~~~~~~~vViG~G~f~~~~~~~~~~p~~~~p~~~~~~~~~~~e~a~~~~~~l~~~g~~~~~~ 203 (409)
T 3h8l_A 124 YGYSVCEPEFATKLREKLESFQGGNIAIGSGPFYQGHNPKPKVPENFVPNADSACEGPVFEMSLMLHGYFKKKGMLDKVH 203 (409)
T ss_dssp HCEESSSTTHHHHHHHHHHHCCSEEEEEEECCBCCCCSSCCBSCTTSSCCCSCSSCHHHHHHHHHHHHHHHTTTCTTTEE
T ss_pred cCcCcCCHHHHHHHHHHHHHhcCCeEEEEecccccCCCccccccccccCCCCcccCCHHHHHHHHHHHHHHHcCCCCCeE
Confidence 2233444444433322 235677999991 466666 45667774 8
Q ss_pred EEEEEeCCCcCCCCCHHHHHHHHHHHHhcCcEEEeCceEEEEEEcCCeEEEEEeecCCCceEEEEcCEEEEeecCCCCCC
Q 011787 240 VTVVEFAADIVPSMDGEIRKQFQRSLEKQKMKFMLKTKVVGVDLSGDGVKLTLEPAAGGEKTILEADVVLVSAGRTPFTA 319 (477)
Q Consensus 240 Vtli~~~~~~~~~~~~~~~~~~~~~l~~~gv~~~~~~~v~~i~~~~~~~~v~~~~~~~~~~~~i~~D~vi~a~G~~p~~~ 319 (477)
|+++++.+ +++.+++++.+.+.+.+++.||+++++++|++++. ++ +++. +++++++|.+++++|++|+..
T Consensus 204 v~~~~~~~-~l~~~~~~~~~~~~~~l~~~gV~~~~~~~v~~i~~--~~--v~~~-----~g~~~~~D~vi~a~G~~~~~~ 273 (409)
T 3h8l_A 204 VTVFSPGE-YLSDLSPNSRKAVASIYNQLGIKLVHNFKIKEIRE--HE--IVDE-----KGNTIPADITILLPPYTGNPA 273 (409)
T ss_dssp EEEECSSS-SSTTBCHHHHHHHHHHHHHHTCEEECSCCEEEECS--SE--EEET-----TSCEEECSEEEEECCEECCHH
T ss_pred EEEEeCCc-cccccCHHHHHHHHHHHHHCCCEEEcCCceEEECC--Ce--EEEC-----CCCEEeeeEEEECCCCCccHH
Confidence 99999988 77888999999999999999999999999999954 33 4443 567899999999999999853
Q ss_pred CCCcccc--ceeecCCCCeecCCCCCC-CCCCeEEecccCC--CCCchhHHHHHHHHHHHHHcCC
Q 011787 320 GLGLDKI--GVETDKMGRIPVNERFAT-NIPGVYAIGDVIP--GPMLAHKAEEDGVACVEFLAGK 379 (477)
Q Consensus 320 ~l~~~~~--gl~~~~~g~i~vd~~l~t-~~~~vya~GD~~~--~~~~~~~A~~~g~~aa~~i~~~ 379 (477)
++.. ++ .+++|++.||+++|| +.|||||+|||+. .|.++..|..||++||+||.+.
T Consensus 274 ---l~~~~~~l-~~~~G~i~vd~~~~~~~~~~vfa~GD~~~~~~~~~~~~A~~q~~~aa~~i~~~ 334 (409)
T 3h8l_A 274 ---LKNSTPDL-VDDGGFIPTDLNMVSIKYDNVYAVGDANSMTVPKLGYLAVMTGRIAAQHLANR 334 (409)
T ss_dssp ---HHTSCGGG-SCTTSCBCBBTTSBBSSCTTEEECGGGBTTCCSCCHHHHHHHHHHHHHHHHHH
T ss_pred ---HHhccccC-cCCCCCEEeCcccccCCCCCEEEeehhccCCCCcHHHHHHHHHHHHHHHHHHH
Confidence 5555 44 366789999999998 8999999999995 5778999999999999999743
No 78
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=100.00 E-value=2e-32 Score=272.78 Aligned_cols=284 Identities=22% Similarity=0.279 Sum_probs=204.2
Q ss_pred CcEEEECCChHHHHHHHHHHH--CCCeEEEEecCCCCCceeeccCccCchhhhhhhHHHHHHHhhhhhCCccccccccCh
Q 011787 44 NDVVVIGGGPGGYVAAIKAAQ--LGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSVEVDL 121 (477)
Q Consensus 44 ~dvvIIGgG~AGl~aA~~l~~--~g~~V~lie~~~~~GG~~~~~~~~p~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 121 (477)
+||+|||||+||+++|..|++ .|++|+|||+++.+++. |... .... ...........
T Consensus 3 ~~vvIIGgG~aGl~aA~~L~~~~~g~~Vtlie~~~~~~~~-------~~~~--------~~~~-----g~~~~~~~~~~- 61 (430)
T 3h28_A 3 KHVVVIGGGVGGIATAYNLRNLMPDLKITLISDRPYFGFT-------PAFP--------HLAM-----GWRKFEDISVP- 61 (430)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCTTCEEEEECSSSEEECG-------GGHH--------HHHH-----TCSCGGGSEEE-
T ss_pred CCEEEECccHHHHHHHHHHHcCCCCCeEEEECCCCCCCcC-------CCcc--------hhcc-----CccCHHHHHHH-
Confidence 699999999999999999999 78999999997654331 1100 0000 00011111111
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhCCeEEEEeEEEEecCCEEEEEecCCceEEEEecEEEEccCCCCCCCCCCcc--CCc
Q 011787 122 PAMMAQKDKAVSNLTRGIEGLFKKNKVTYVKGYGKFISPSEVSVDTIEGGNTVVKGKNIIIATGSDVKSLPGITI--DEK 199 (477)
Q Consensus 122 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~v~~~~g~~~~i~~d~lvlAtG~~~~~~~g~~~--~~~ 199 (477)
+...+++.+++++.+++..++.+...|.+.++ .++.||+||+|||+++.. |+++. ...
T Consensus 62 -----------------~~~~~~~~gv~~~~~~v~~id~~~~~v~~~~g--~~i~~d~liiAtG~~~~~-pg~~~~g~~~ 121 (430)
T 3h28_A 62 -----------------LAPLLPKFNIEFINEKAESIDPDANTVTTQSG--KKIEYDYLVIATGPKLVF-GAEGQEENST 121 (430)
T ss_dssp -----------------STTTGGGGTEEEECSCEEEEETTTTEEEETTC--CEEECSEEEECCCCEEEC-CSBTHHHHSC
T ss_pred -----------------HHHHHHhcCCEEEEEEEEEEECCCCEEEECCC--cEEECCEEEEcCCccccc-CCCCCcCCcc
Confidence 12345567999998888888887767777777 679999999999998753 34431 122
Q ss_pred eEecchhhhcccC------CCCeeEEEcccHHH------HHHH----HHHHHcC----CcEEEEEeCCCcCC----CCCH
Q 011787 200 RIVSSTGALALNE------VPKKLVVIGAGYIG------LEMG----SVWARLG----SEVTVVEFAADIVP----SMDG 255 (477)
Q Consensus 200 ~~~~~~~~~~~~~------~~~~v~IiG~G~~g------~e~a----~~l~~~g----~~Vtli~~~~~~~~----~~~~ 255 (477)
.+.+.++...+.. ..++++|||+|+.+ +|+| ..+++.| .+|+++++.+.+.+ .+ +
T Consensus 122 ~~~~~~~a~~~~~~~~~~~~~~~~vVVGgG~~~~~~G~~~E~a~~la~~l~~~g~~~~~~V~~v~~~~~~~~~~l~~~-~ 200 (430)
T 3h28_A 122 SICTAEHALETQKKLQELYANPGPVVIGAIPGVSCFGPAYEFALMLHYELKKRGIRYKVPMTFITSEPYLGHFGVGGI-G 200 (430)
T ss_dssp CCSSHHHHHHHHHHHHHHHHSCCCEEEEECTTCCCCHHHHHHHHHHHHHHHHTTCGGGCCEEEECSSSSTTCTTTTCS-T
T ss_pred CcCCHHHHHHHHHHHHHHHhcCCeEEEEcCCCCCcCcHHHHHHHHHHHHHHHcCCccceEEEEecCCccccccccCcc-h
Confidence 3555555544322 13457889987654 7777 4555667 47999998887632 22 3
Q ss_pred HHHHHHHHHHHhcCcEEEeCceEEEEEEcCCeEEEEEeecCCCceEEEEcCEEEEeecCCCCCCCCCccc--cceeecCC
Q 011787 256 EIRKQFQRSLEKQKMKFMLKTKVVGVDLSGDGVKLTLEPAAGGEKTILEADVVLVSAGRTPFTAGLGLDK--IGVETDKM 333 (477)
Q Consensus 256 ~~~~~~~~~l~~~gv~~~~~~~v~~i~~~~~~~~v~~~~~~~~~~~~i~~D~vi~a~G~~p~~~~l~~~~--~gl~~~~~ 333 (477)
+..+.+.+.++++||++++++.|++++. +.+. +++. .++++++++|.+++++|++|+.. +.. .++ .+++
T Consensus 201 ~~~~~l~~~l~~~GV~i~~~~~v~~v~~--~~v~--~~~~-~~~g~~i~~D~vv~a~G~~~~~~---l~~~~~gl-~~~~ 271 (430)
T 3h28_A 201 ASKRLVEDLFAERNIDWIANVAVKAIEP--DKVI--YEDL-NGNTHEVPAKFTMFMPSFQGPEV---VASAGDKV-ANPA 271 (430)
T ss_dssp THHHHHHHHHHHTTCEEECSCEEEEECS--SEEE--EECT-TSCEEEEECSEEEEECEEECCHH---HHTTCTTT-BCTT
T ss_pred HHHHHHHHHHHHCCCEEEeCCEEEEEeC--CeEE--EEec-CCCceEEeeeEEEECCCCccchh---HhhccccC-cCCC
Confidence 5788889999999999999999999953 4443 3321 23478999999999999998754 333 466 5778
Q ss_pred C-CeecCCCCCC-CCCCeEEecccCCC------------CCchhHHHHHHHHHHHHHcC
Q 011787 334 G-RIPVNERFAT-NIPGVYAIGDVIPG------------PMLAHKAEEDGVACVEFLAG 378 (477)
Q Consensus 334 g-~i~vd~~l~t-~~~~vya~GD~~~~------------~~~~~~A~~~g~~aa~~i~~ 378 (477)
| +|.||+++|| ++|||||+|||+.. |.+++.|..||+.||+||..
T Consensus 272 G~~i~Vd~~l~t~~~~~Ifa~GD~~~~~~~~~~~~~~~~pk~~~~A~~~g~~aa~ni~~ 330 (430)
T 3h28_A 272 NKMVIVNRCFQNPTYKNIFGVGVVTAIPPIEKTPIPTGVPKTGMMIEQMAMAVAHNIVN 330 (430)
T ss_dssp TCCBCCCTTSBCSSSTTEEECSTTBCCCCSSCCSSCCCCCCCHHHHHHHHHHHHHHHHH
T ss_pred CCEEecCccccCCCCCCEEEEEeeeccCCccCCCCCCCCCchHHHHHHHHHHHHHHHHH
Confidence 9 9999999997 99999999999963 56899999999999999974
No 79
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=100.00 E-value=8.5e-33 Score=276.29 Aligned_cols=281 Identities=17% Similarity=0.220 Sum_probs=199.8
Q ss_pred CCcEEEECCChHHHHHHHHHHHCC--CeEEEEecCCCCCceeeccCccCchhhhhhhHHHHHHHhhhhhCCccccccccC
Q 011787 43 ENDVVVIGGGPGGYVAAIKAAQLG--LKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSVEVD 120 (477)
Q Consensus 43 ~~dvvIIGgG~AGl~aA~~l~~~g--~~V~lie~~~~~GG~~~~~~~~p~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~~ 120 (477)
.+||+||||||||+++|..|++.| .+|+|||+.+.+||.+ +.++.|.+....
T Consensus 6 ~~~vvIIG~G~aGl~aA~~l~~~g~~~~V~vie~~~~~gg~~-~~g~~p~~~~~~------------------------- 59 (460)
T 1cjc_A 6 TPQICVVGSGPAGFYTAQHLLKHHSRAHVDIYEKQLVPFGLV-RFGVAPDHPEVK------------------------- 59 (460)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCSSCEEEEECSSSSSCTHH-HHTSCTTCGGGG-------------------------
T ss_pred CceEEEECcCHHHHHHHHHHHhcCCCCCEEEEeCCCcCCcee-ecccCCCCccHH-------------------------
Confidence 479999999999999999999988 9999999988888764 445544321110
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhhhCCeEEEEeEEEEecCCEEEEEecCCceEEEEecEEEEccCCCC-C--CCCCCccC
Q 011787 121 LPAMMAQKDKAVSNLTRGIEGLFKKNKVTYVKGYGKFISPSEVSVDTIEGGNTVVKGKNIIIATGSDV-K--SLPGITID 197 (477)
Q Consensus 121 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~v~~~~g~~~~i~~d~lvlAtG~~~-~--~~~g~~~~ 197 (477)
.+...+...+++.+++++.+... . . .|.+.+ ..+.||+||||||+.+ + .+||.+
T Consensus 60 -------------~~~~~~~~~~~~~gv~~~~~~~v--~-~--~V~~~~---~~~~~d~lVlAtGs~~~~~~~ipG~~-- 116 (460)
T 1cjc_A 60 -------------NVINTFTQTARSDRCAFYGNVEV--G-R--DVTVQE---LQDAYHAVVLSYGAEDHQALDIPGEE-- 116 (460)
T ss_dssp -------------GHHHHHHHHHTSTTEEEEBSCCB--T-T--TBCHHH---HHHHSSEEEECCCCCEECCCCCTTTT--
T ss_pred -------------HHHHHHHHHHHhCCcEEEeeeEE--e-e--EEEecc---ceEEcCEEEEecCcCCCCCCCCCCCC--
Confidence 01112334556678887765321 1 1 122222 2368999999999986 3 345543
Q ss_pred CceEecchhhhc----------cc-C-CCCeeEEEcccHHHHHHHHHHH--------------------HcCC-cEEEEE
Q 011787 198 EKRIVSSTGALA----------LN-E-VPKKLVVIGAGYIGLEMGSVWA--------------------RLGS-EVTVVE 244 (477)
Q Consensus 198 ~~~~~~~~~~~~----------~~-~-~~~~v~IiG~G~~g~e~a~~l~--------------------~~g~-~Vtli~ 244 (477)
...+++..++.. +. . .+++++|||+|++|+|+|..|+ +.+. +|+++.
T Consensus 117 ~~gv~~~~~~~~~~~~~~d~~~~~~~~~~~~vvVIGgG~~g~e~A~~L~~~~~~l~~tdi~~~a~~~l~~~g~~~V~lv~ 196 (460)
T 1cjc_A 117 LPGVFSARAFVGWYNGLPENRELAPDLSCDTAVILGQGNVALDVARILLTPPDHLEKTDITEAALGALRQSRVKTVWIVG 196 (460)
T ss_dssp STTEEEHHHHHHHHTTCGGGTTCCCCTTSSEEEEESCSHHHHHHHHHHHSCGGGGTTSCCCHHHHHHHHTCCCCEEEEEC
T ss_pred CCcEEEHHHHHHHhhcCccccccccCCCCCEEEEECCCHHHHHHHHHHhhchhhhccccccHHHHHHHhhCCCcEEEEEE
Confidence 445677665521 11 1 4799999999999999999998 5677 799999
Q ss_pred eCCCc--------------CCCC-------------------CHH---HHHHHHHHHHh--------------cCcEEEe
Q 011787 245 FAADI--------------VPSM-------------------DGE---IRKQFQRSLEK--------------QKMKFML 274 (477)
Q Consensus 245 ~~~~~--------------~~~~-------------------~~~---~~~~~~~~l~~--------------~gv~~~~ 274 (477)
|++.+ +|.. +.. +.+.+.+.+++ +||++++
T Consensus 197 r~~~~~~~ft~~el~~l~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~gv~~~~ 276 (460)
T 1cjc_A 197 RRGPLQVAFTIKELREMIQLPGTRPMLDPADFLGLQDRIKEAARPRKRLMELLLRTATEKPGVEEAARRASASRAWGLRF 276 (460)
T ss_dssp SSCGGGCCCCHHHHHHHHTCTTEEEECCGGGGTTHHHHTTTSCHHHHHHHHHHHHHHHSCCCHHHHHHHHTCSEEEEEEC
T ss_pred cCChHhhccCHHHHHHhhcCCCceeEechhhhcchhhhhhhccHHHHHHHHHHHHHHHhccccccccCCCCCCceEEEEC
Confidence 98865 2210 110 22334445545 8999999
Q ss_pred CceEEEEEEcC-C-eE-EEEEeec------------CCCceEEEEcCEEEEeecCCCCCCCCCccccce-eecCCCCeec
Q 011787 275 KTKVVGVDLSG-D-GV-KLTLEPA------------AGGEKTILEADVVLVSAGRTPFTAGLGLDKIGV-ETDKMGRIPV 338 (477)
Q Consensus 275 ~~~v~~i~~~~-~-~~-~v~~~~~------------~~~~~~~i~~D~vi~a~G~~p~~~~l~~~~~gl-~~~~~g~i~v 338 (477)
++.+.++..++ + .+ .+++... .+++.++++||.|++++|++|+.. .|+ +++++|+|.+
T Consensus 277 ~~~~~~i~~~~~~~~v~~v~~~~~~l~~~~~~~~~~~~g~~~~i~~d~Vi~a~G~~p~~l------~gl~~~d~~g~i~v 350 (460)
T 1cjc_A 277 FRSPQQVLPSPDGRRAAGIRLAVTRLEGIGEATRAVPTGDVEDLPCGLVLSSIGYKSRPI------DPSVPFDPKLGVVP 350 (460)
T ss_dssp SEEEEEEEECTTSSSEEEEEEEEEEEESSGGGCEEEEEEEEEEEECSEEEECCCEECCCC------CTTSCCBTTTTBCC
T ss_pred CCChheEEcCCCCceEEEEEEEEEEEccccCCCcccCCCceEEEEcCEEEECCCCCCCCC------CCCcccccCCCeeE
Confidence 99999998763 3 33 2443311 023346899999999999999972 467 7888899999
Q ss_pred CCCCCCC-CCCeEEecccCCCCC-chhHHHHHHHHHHHHHcC
Q 011787 339 NERFATN-IPGVYAIGDVIPGPM-LAHKAEEDGVACVEFLAG 378 (477)
Q Consensus 339 d~~l~t~-~~~vya~GD~~~~~~-~~~~A~~~g~~aa~~i~~ 378 (477)
|+++||+ +|+|||+|||+.+|. .+..|+.+|+.+|.+|++
T Consensus 351 n~~~rt~~~p~vya~Gd~~~g~~~~i~~a~~~g~~aa~~i~~ 392 (460)
T 1cjc_A 351 NMEGRVVDVPGLYCSGWVKRGPTGVITTTMTDSFLTGQILLQ 392 (460)
T ss_dssp EETTEETTCTTEEECTHHHHCTTCCHHHHHHHHHHHHHHHHH
T ss_pred CCCCcCcCCCCEEEEEeCCcCCCccHHHHHHHHHHHHHHHHH
Confidence 9999998 799999999997665 567899999999999975
No 80
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=100.00 E-value=7.9e-33 Score=290.82 Aligned_cols=296 Identities=21% Similarity=0.228 Sum_probs=215.8
Q ss_pred hhhhcccCCCcceeccccccCCCCCCCCCCCcEEEECCChHHHHHHHHHHHCCCeEEEEecCCCCCceeeccCccCchhh
Q 011787 14 LSRNLSNSSNGNVFKYSFSLTRGFASASDENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKAL 93 (477)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dvvIIGgG~AGl~aA~~l~~~g~~V~lie~~~~~GG~~~~~~~~p~~~l 93 (477)
+..|..|+..+++......+.. .++....+||+|||||+||++||..|++.|++|+|||+++.+||++....+.|.+.
T Consensus 363 ~~~C~vnp~~g~e~~~~~~~~~-~~~~~~~~~VvIIGgG~AGl~aA~~La~~G~~V~liE~~~~~GG~~~~~~~~p~~~- 440 (690)
T 3k30_A 363 PIRCTQNPSMGEEWRRGWHPER-IRAKESDARVLVVGAGPSGLEAARALGVRGYDVVLAEAGRDLGGRVTQESALPGLS- 440 (690)
T ss_dssp CCCCSSCTTTTTTTTTCCCSSC-CCCCSSCCEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSSCTHHHHHHTSTTCG-
T ss_pred cccCCcCcccCcccccccCccc-cCcccccceEEEECCCHHHHHHHHHHHHCCCeEEEEecCCCCCCEeeeccCCCchh-
Confidence 4578888888887654333222 23445678999999999999999999999999999999999999876544444221
Q ss_pred hhhhHHHHHHHhhhhhCCccccccccChHHHHHHHHHHHHHHHHHHHHHhhhC-CeEEEEeEEEEecCCEEEEEecCCce
Q 011787 94 LHSSHMYHEAMHSFASHGVKFSSVEVDLPAMMAQKDKAVSNLTRGIEGLFKKN-KVTYVKGYGKFISPSEVSVDTIEGGN 172 (477)
Q Consensus 94 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~v~~~~~~~~~~~~~~~~v~~~~g~~ 172 (477)
++.. +..++...+.+. ++++..++. +...++
T Consensus 441 --------------------------~~~~-----------~~~~~~~~~~~~~gv~~~~~~~---------v~~~~~-- 472 (690)
T 3k30_A 441 --------------------------AWGR-----------VKEYREAVLAELPNVEIYRESP---------MTGDDI-- 472 (690)
T ss_dssp --------------------------GGGH-----------HHHHHHHHHHTCTTEEEESSCC---------CCHHHH--
T ss_pred --------------------------HHHH-----------HHHHHHHHHHHcCCCEEEECCe---------ecHHHH--
Confidence 1111 112223344444 777665531 222222
Q ss_pred EEEEecEEEEccCCCCC----------CCCCCccCCceEecchhhhccc-CCCCeeEEEc--ccHHHHHHHHHHHHcCCc
Q 011787 173 TVVKGKNIIIATGSDVK----------SLPGITIDEKRIVSSTGALALN-EVPKKLVVIG--AGYIGLEMGSVWARLGSE 239 (477)
Q Consensus 173 ~~i~~d~lvlAtG~~~~----------~~~g~~~~~~~~~~~~~~~~~~-~~~~~v~IiG--~G~~g~e~a~~l~~~g~~ 239 (477)
.++.||+||+|||+.|. .+|+. +...+++..+..... ..+++++||| +|.+|+|+|..|++.|.+
T Consensus 473 ~~~~~d~lvlAtG~~~~~~~~~~~~~~~i~G~--~~~~v~~~~~~l~~~~~~g~~VvViG~ggG~~g~e~A~~L~~~g~~ 550 (690)
T 3k30_A 473 VEFGFEHVITATGATWRTDGVARFHTTALPIA--EGMQVLGPDDLFAGRLPDGKKVVVYDDDHYYLGGVVAELLAQKGYE 550 (690)
T ss_dssp HHTTCCEEEECCCEEECSSCCSSSCSSCCCBC--TTSEEECHHHHHTTCCCSSSEEEEEECSCSSHHHHHHHHHHHTTCE
T ss_pred hhcCCCEEEEcCCCccccccccccCCCCCCCC--CCCcEEcHHHHhCCCCCCCCEEEEEcCCCCccHHHHHHHHHhCCCe
Confidence 45789999999999842 23443 345778877766543 3467899999 999999999999999999
Q ss_pred EEEEEeCCCcCCCCC-HHHHHHHHHHHHhcCcEEEeCceEEEEEEcCCeEEEEEeecCCCceEEEEcCEEEEeecCCCCC
Q 011787 240 VTVVEFAADIVPSMD-GEIRKQFQRSLEKQKMKFMLKTKVVGVDLSGDGVKLTLEPAAGGEKTILEADVVLVSAGRTPFT 318 (477)
Q Consensus 240 Vtli~~~~~~~~~~~-~~~~~~~~~~l~~~gv~~~~~~~v~~i~~~~~~~~v~~~~~~~~~~~~i~~D~vi~a~G~~p~~ 318 (477)
|+++++.+.+++..+ +.....+.+.+++.||+++++++|++++. +++.+.. ..+++++++++|.||+|+|++|+.
T Consensus 551 Vtlv~~~~~l~~~~~~~~~~~~l~~~l~~~GV~i~~~~~V~~i~~--~~~~v~~--~~~~~~~~i~aD~VV~A~G~~p~~ 626 (690)
T 3k30_A 551 VSIVTPGAQVSSWTNNTFEVNRIQRRLIENGVARVTDHAVVAVGA--GGVTVRD--TYASIERELECDAVVMVTARLPRE 626 (690)
T ss_dssp EEEEESSSSTTGGGGGGTCHHHHHHHHHHTTCEEEESEEEEEEET--TEEEEEE--TTTCCEEEEECSEEEEESCEEECC
T ss_pred eEEEecccccccccccchhHHHHHHHHHHCCCEEEcCcEEEEEEC--CeEEEEE--ccCCeEEEEECCEEEECCCCCCCh
Confidence 999999988776443 55677888999999999999999999964 3444432 234567789999999999999998
Q ss_pred CCCCccccceeecCCCCeecCCCCCCCCCCeEEecccCCCCCchhHHHHHHHHHHHHHcCC
Q 011787 319 AGLGLDKIGVETDKMGRIPVNERFATNIPGVYAIGDVIPGPMLAHKAEEDGVACVEFLAGK 379 (477)
Q Consensus 319 ~~l~~~~~gl~~~~~g~i~vd~~l~t~~~~vya~GD~~~~~~~~~~A~~~g~~aa~~i~~~ 379 (477)
.+ ++.++.. +. +|+.|+|||+|||+..+ ....|..||+.||.+|.+.
T Consensus 627 ~l--~~~l~~~----~~-------~t~~~~VyaiGD~~~~~-~~~~A~~~g~~aa~~i~~~ 673 (690)
T 3k30_A 627 EL--YLDLVAR----RD-------AGEIASVRGIGDAWAPG-TIAAAVWSGRRAAEEFDAV 673 (690)
T ss_dssp HH--HHHHHHH----HH-------HTSCSEEEECGGGTSCB-CHHHHHHHHHHHHHHTTCC
T ss_pred HH--HHHHhhh----hc-------ccCCCCEEEEeCCCchh-hHHHHHHHHHHHHHHHHhh
Confidence 74 3332211 11 78999999999999755 4455999999999999876
No 81
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=100.00 E-value=3.3e-31 Score=265.86 Aligned_cols=308 Identities=15% Similarity=0.169 Sum_probs=197.4
Q ss_pred CcEEEECCChHHHHHHHHHHH---CCCe---EEEEecCCCCCceeecc---CccCchhhhhhhHHHHHHHhhhhhCCccc
Q 011787 44 NDVVVIGGGPGGYVAAIKAAQ---LGLK---TTCIEKRGALGGTCLNV---GCIPSKALLHSSHMYHEAMHSFASHGVKF 114 (477)
Q Consensus 44 ~dvvIIGgG~AGl~aA~~l~~---~g~~---V~lie~~~~~GG~~~~~---~~~p~~~l~~~~~~~~~~~~~~~~~g~~~ 114 (477)
+||+|||||+||++||..|++ .|.+ |+|||+++.+||+|.+. +|.|...... ...+.............+
T Consensus 3 ~~V~IIGaG~aGl~aA~~L~~~~~~G~~~~~V~v~E~~~~~GG~w~~~~~~g~~~~g~~~~-~~~y~~l~~~~~~~~~~~ 81 (464)
T 2xve_A 3 TRIAILGAGPSGMAQLRAFQSAQEKGAEIPELVCFEKQADWGGQWNYTWRTGLDENGEPVH-SSMYRYLWSNGPKECLEF 81 (464)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHHHTTCCCCEEEEECSSSSSCGGGSCCSCCSBCTTSSBCC-CCCCTTCBCSSCGGGTCB
T ss_pred CcEEEECccHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCCEeecCCCCCccccCCCCc-CccccchhhcCChhhccc
Confidence 699999999999999999999 9999 99999999999999764 2322100000 000000000000000000
Q ss_pred cccccChHHHHH---HHHHHHHHHHHHHHHHhhhCCeE--EEEe-EEEEec--CC--EEEEEecC---CceEEEEecEEE
Q 011787 115 SSVEVDLPAMMA---QKDKAVSNLTRGIEGLFKKNKVT--YVKG-YGKFIS--PS--EVSVDTIE---GGNTVVKGKNII 181 (477)
Q Consensus 115 ~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~v~--~~~~-~~~~~~--~~--~~~v~~~~---g~~~~i~~d~lv 181 (477)
. .+++..-.. ........+.+++....++.+++ +..+ .+..++ .+ .+.|.+.+ |...++.||+||
T Consensus 82 ~--~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~gv~~~i~~~~~V~~v~~~~~~~~~~V~~~~~~~g~~~~~~~d~VV 159 (464)
T 2xve_A 82 A--DYTFDEHFGKPIASYPPREVLWDYIKGRVEKAGVRKYIRFNTAVRHVEFNEDSQTFTVTVQDHTTDTIYSEEFDYVV 159 (464)
T ss_dssp T--TBCHHHHHSSCCCSSCBHHHHHHHHHHHHHHHTCGGGEECSEEEEEEEEETTTTEEEEEEEETTTTEEEEEEESEEE
T ss_pred C--CCCCCcccCCCCCCCCCHHHHHHHHHHHHHHcCCcceEEeCCEEEEEEEcCCCCcEEEEEEEcCCCceEEEEcCEEE
Confidence 0 011110000 00000011222333344444554 4333 444442 22 55665543 434678999999
Q ss_pred EccC--CCCCC--CCCCccCCceEecchhhhccc-CCCCeeEEEcccHHHHHHHHHHHHcCCcEEEEEeCCCcCCCCCHH
Q 011787 182 IATG--SDVKS--LPGITIDEKRIVSSTGALALN-EVPKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIVPSMDGE 256 (477)
Q Consensus 182 lAtG--~~~~~--~~g~~~~~~~~~~~~~~~~~~-~~~~~v~IiG~G~~g~e~a~~l~~~g~~Vtli~~~~~~~~~~~~~ 256 (477)
+||| +.|.. +||.+.....++++.++.... ..+++|+|||+|.+|+|+|..|++.|.+|+++++++.+++..-
T Consensus 160 vAtG~~s~p~~p~ipG~~~~~g~~~hs~~~~~~~~~~~k~VvVVG~G~sg~eiA~~l~~~g~~V~li~~~~~~~~~~~-- 237 (464)
T 2xve_A 160 CCTGHFSTPYVPEFEGFEKFGGRILHAHDFRDALEFKDKTVLLVGSSYSAEDIGSQCYKYGAKKLISCYRTAPMGYKW-- 237 (464)
T ss_dssp ECCCSSSSBCCCCCBTTTTCCSEEEEGGGCCCGGGGTTSEEEEECCSTTHHHHHHHHHHTTCSEEEEECSSCCCCCCC--
T ss_pred ECCCCCCCCccCCCCCcccCCceEEehhhhCCHhHcCCCEEEEEcCCCCHHHHHHHHHHhCCeEEEEEECCCCCCCCC--
Confidence 9999 77743 455443223455555544332 3589999999999999999999999999999999887765321
Q ss_pred HHHHHHHHHHhcCcEEEeCceEEEEEEcCCeEEEEEeecCCCceEEEEcCEEEEeecCCCCCCCCCccccceeecCCCCe
Q 011787 257 IRKQFQRSLEKQKMKFMLKTKVVGVDLSGDGVKLTLEPAAGGEKTILEADVVLVSAGRTPFTAGLGLDKIGVETDKMGRI 336 (477)
Q Consensus 257 ~~~~~~~~l~~~gv~~~~~~~v~~i~~~~~~~~v~~~~~~~~~~~~i~~D~vi~a~G~~p~~~~l~~~~~gl~~~~~g~i 336 (477)
..||+++ ..|++++ +++ +.+. +++++++|.||+|+|++|+.+++. +..++..+++|++
T Consensus 238 ----------~~~V~~~--~~V~~i~--~~~--V~~~-----dG~~i~~D~Vi~atG~~p~~~~l~-~~~gl~~~~~~~v 295 (464)
T 2xve_A 238 ----------PENWDER--PNLVRVD--TEN--AYFA-----DGSSEKVDAIILCTGYIHHFPFLN-DDLRLVTNNRLWP 295 (464)
T ss_dssp ----------CTTEEEC--SCEEEEC--SSE--EEET-----TSCEEECSEEEECCCBCCCCTTBC-TTTCCCCCSSSCC
T ss_pred ----------CCceEEc--CCeEEEe--CCE--EEEC-----CCCEEeCCEEEECCCCCCCCCCcC-cccccccCCCccc
Confidence 2478876 6788884 333 4443 556899999999999999998753 3467877765555
Q ss_pred ecCCC---CCCCCCCeEEecccCCCCCchhHHHHHHHHHHHHHcCCC
Q 011787 337 PVNER---FATNIPGVYAIGDVIPGPMLAHKAEEDGVACVEFLAGKH 380 (477)
Q Consensus 337 ~vd~~---l~t~~~~vya~GD~~~~~~~~~~A~~~g~~aa~~i~~~~ 380 (477)
++.+ ++|+.|+|||+||++.. ..++.|..||+++|++|.|..
T Consensus 296 -~~~~~~~~~t~~p~i~aiGd~~~~-~~~~~a~~qa~~~a~~l~G~~ 340 (464)
T 2xve_A 296 -LNLYKGVVWEDNPKFFYIGMQDQW-YSFNMFDAQAWYARDVIMGRL 340 (464)
T ss_dssp -SSEETTTEESSSTTEEECSCSCCS-SCHHHHHHHHHHHHHHHTTSS
T ss_pred -ccccceEecCCCCCEEEEeCcccc-cchHHHHHHHHHHHHHHcCCC
Confidence 4433 56899999999998864 468899999999999999763
No 82
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=99.98 E-value=1.5e-30 Score=262.17 Aligned_cols=316 Identities=15% Similarity=0.178 Sum_probs=202.4
Q ss_pred CCCcEEEECCChHHHHHHHHHHHCC-----CeEEEEecCCCCCceeeccCcc-Cchhhh-----------hhhHHHHHHH
Q 011787 42 DENDVVVIGGGPGGYVAAIKAAQLG-----LKTTCIEKRGALGGTCLNVGCI-PSKALL-----------HSSHMYHEAM 104 (477)
Q Consensus 42 ~~~dvvIIGgG~AGl~aA~~l~~~g-----~~V~lie~~~~~GG~~~~~~~~-p~~~l~-----------~~~~~~~~~~ 104 (477)
..+||+|||||+||+++|..|++.| .+|+|||+++.+|... +.. |...+. .....+ .+.
T Consensus 29 ~~~dVvIIGaG~aGl~aA~~L~~~g~~~~~~~v~liE~~~~~g~~~---~~~~~~~~~~~~~~~~l~~~~~p~~~~-~~~ 104 (463)
T 3s5w_A 29 VVHDLIGVGFGPSNIALAIALQERAQAQGALEVLFLDKQGDYRWHG---NTLVSQSELQISFLKDLVSLRNPTSPY-SFV 104 (463)
T ss_dssp CEESEEEECCSHHHHHHHHHHHHHHHHHCCCCEEEEESCSSCCSSG---GGCCSSCBCSSCTTSSSSTTTCTTCTT-SHH
T ss_pred CcCCEEEECCCHHHHHHHHHHHhcccccCcccEEEEecCCCCCCcC---CCCCCCCcCCcchhhccccccCCCCCC-Chh
Confidence 4579999999999999999999998 9999999988777211 111 110000 000000 000
Q ss_pred hhhhhCCcc-----ccccccChHHHHHHHHHHHHHHHHHHHHHhhhCCeEEEEeE-EEEecC----CE---EEEEecCC-
Q 011787 105 HSFASHGVK-----FSSVEVDLPAMMAQKDKAVSNLTRGIEGLFKKNKVTYVKGY-GKFISP----SE---VSVDTIEG- 170 (477)
Q Consensus 105 ~~~~~~g~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~~~----~~---~~v~~~~g- 170 (477)
.++...+.. ....... ...+..++....++.++++..+. +..++. .. +.|.+.++
T Consensus 105 ~~l~~~~~~~~~~~~~~~~~~-----------~~~~~~~l~~~~~~~~~~i~~~~~V~~i~~~~~~~~~~~~~V~~~~g~ 173 (463)
T 3s5w_A 105 NYLHKHDRLVDFINLGTFYPC-----------RMEFNDYLRWVASHFQEQSRYGEEVLRIEPMLSAGQVEALRVISRNAD 173 (463)
T ss_dssp HHHHHTTCHHHHHHHCCSCCB-----------HHHHHHHHHHHHTTCTTTEEESEEEEEEEEEEETTEEEEEEEEEEETT
T ss_pred HhhhhcCceeecccccCCCCC-----------HHHHHHHHHHHHHHcCCeEEeCCEEEEEEEecCCCceEEEEEEEecCC
Confidence 000000000 0000000 11223333444555567776654 555442 22 35655544
Q ss_pred -ceEEEEecEEEEccCCCCCCCCCCc-cCC--ceEecchhhhcccC------CCCeeEEEcccHHHHHHHHHHHHc--CC
Q 011787 171 -GNTVVKGKNIIIATGSDVKSLPGIT-IDE--KRIVSSTGALALNE------VPKKLVVIGAGYIGLEMGSVWARL--GS 238 (477)
Q Consensus 171 -~~~~i~~d~lvlAtG~~~~~~~g~~-~~~--~~~~~~~~~~~~~~------~~~~v~IiG~G~~g~e~a~~l~~~--g~ 238 (477)
+..++.||+||+|||+.|..+++.+ ... ..+++......... .+++|+|||+|.+|+|+|..|++. +.
T Consensus 174 g~~~~~~~d~lVlAtG~~p~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vvVvGgG~sg~e~a~~l~~~~~~~ 253 (463)
T 3s5w_A 174 GEELVRTTRALVVSPGGTPRIPQVFRALKGDGRVFHHSQYLEHMAKQPCSSGKPMKIAIIGGGQSAAEAFIDLNDSYPSV 253 (463)
T ss_dssp SCEEEEEESEEEECCCCEECCCGGGGGGTTCTTEEEGGGHHHHHCC-------CEEEEEECCSHHHHHHHHHHHHHCTTE
T ss_pred CceEEEEeCEEEECCCCCCCCcchhhhcCCCCcEEECHHHHhhHHHhhhcccCCCeEEEECCCHhHHHHHHHHHhcCCCC
Confidence 2348999999999999876554333 223 23333333222332 479999999999999999999999 89
Q ss_pred cEEEEEeCCCcCCCC--------------------CHHHHHHHHHHHHh--------------------------cCcEE
Q 011787 239 EVTVVEFAADIVPSM--------------------DGEIRKQFQRSLEK--------------------------QKMKF 272 (477)
Q Consensus 239 ~Vtli~~~~~~~~~~--------------------~~~~~~~~~~~l~~--------------------------~gv~~ 272 (477)
+|++++|.+.++|.. +++....+.+.+.. .||++
T Consensus 254 ~Vt~v~r~~~~~p~~~~~~~~~~~~p~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i 333 (463)
T 3s5w_A 254 QADMILRASALKPADDSPFVNEVFAPKFTDLIYSREHAERERLLREYHNTNYSVVDTDLIERIYGVFYRQKVSGIPRHAF 333 (463)
T ss_dssp EEEEECSSSSCCBCCCCHHHHGGGSHHHHHHHHHSCHHHHHHHHHHTGGGTSSCBCHHHHHHHHHHHHHHHHHCCCCSEE
T ss_pred eEEEEEeCCCCcCccCCccchhccChhHHHHHhcCCHHHHHHHHHHhhccCCCcCCHHHHHHHHHHHHHHHhcCCCCeEE
Confidence 999999999876522 22222333333222 59999
Q ss_pred EeCceEEEEEEcCCeEEEEEeecCCCceEEEEcCEEEEeecCCCC--CCCCCccccceeecCCCCeecCCCCCCC-----
Q 011787 273 MLKTKVVGVDLSGDGVKLTLEPAAGGEKTILEADVVLVSAGRTPF--TAGLGLDKIGVETDKMGRIPVNERFATN----- 345 (477)
Q Consensus 273 ~~~~~v~~i~~~~~~~~v~~~~~~~~~~~~i~~D~vi~a~G~~p~--~~~l~~~~~gl~~~~~g~i~vd~~l~t~----- 345 (477)
+++++|++++.+++++.+++.+..++...++++|.||+|+|++|+ ..+ +....... |++.||+++++.
T Consensus 334 ~~~~~v~~v~~~~~~~~v~~~~~~~g~~~~~~~D~Vv~AtG~~p~~~~~~--l~~l~~~~---g~i~v~~~~~~~~~~~~ 408 (463)
T 3s5w_A 334 RCMTTVERATATAQGIELALRDAGSGELSVETYDAVILATGYERQLHRQL--LEPLAEYL---GDHEIGRDYRLQTDERC 408 (463)
T ss_dssp ETTEEEEEEEEETTEEEEEEEETTTCCEEEEEESEEEECCCEECCC-CTT--TGGGGGGB---C--CCCTTSBCCBCTTB
T ss_pred EeCCEEEEEEecCCEEEEEEEEcCCCCeEEEECCEEEEeeCCCCCCccch--hHHHHHHh---CCcccCcccccccCCCC
Confidence 999999999988888888887655666667999999999999999 443 44433322 789999999854
Q ss_pred CCCeEEecccC-----CCCCchhHHHHHHHHHHHHHc
Q 011787 346 IPGVYAIGDVI-----PGPMLAHKAEEDGVACVEFLA 377 (477)
Q Consensus 346 ~~~vya~GD~~-----~~~~~~~~A~~~g~~aa~~i~ 377 (477)
.|+|||+|||. ..+.+...|.+++.+++..+.
T Consensus 409 ~~~Ifa~G~~~~~~g~~~~~l~~~a~r~~~i~~~~~~ 445 (463)
T 3s5w_A 409 KVAIYAQGFSQASHGLSDTLLSVLPVRAEEISGSLYQ 445 (463)
T ss_dssp CSEEEESSCCHHHHCTTTTSSTTHHHHHHHHHHHHHH
T ss_pred CCeEEEcCCCcccCCcCccchhHHHHHHHHHHHHHHh
Confidence 56799999998 346678889999998877664
No 83
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=99.98 E-value=1.4e-32 Score=289.92 Aligned_cols=315 Identities=17% Similarity=0.234 Sum_probs=214.0
Q ss_pred hhhhcccCCCcceeccccccCCCCCCCCCCCcEEEECCChHHHHHHHHHHHCCCeEEEEecCCCCCceeeccCccCchhh
Q 011787 14 LSRNLSNSSNGNVFKYSFSLTRGFASASDENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKAL 93 (477)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dvvIIGgG~AGl~aA~~l~~~g~~V~lie~~~~~GG~~~~~~~~p~~~l 93 (477)
+..|..|+..+++......+. ..++....+||+|||||+||++||..|++.|++|+|||+++.+||+|....+.|....
T Consensus 361 ~~~C~~n~~~g~e~~~~~~~~-~~~~~~~~~~VvIIGgGpAGl~aA~~L~~~G~~Vtlie~~~~~GG~~~~~~~~pg~~~ 439 (729)
T 1o94_A 361 PMICTQNATAGEEYRRGWHPE-KFRQTKNKDSVLIVGAGPSGSEAARVLMESGYTVHLTDTAEKIGGHLNQVAALPGLGE 439 (729)
T ss_dssp CCCCSSCTTTTTHHHHCCCTT-CCCCCSSCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSTTTTHHHHTTSTTCGG
T ss_pred ceeeccCcccccccccccccc-ccccccCCceEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCcCCeeeecccCCChHH
Confidence 356888888887643222121 1233445689999999999999999999999999999999999998876665553211
Q ss_pred hhhhHHHHHHHhhhhhCCccccccccChHHHHHHHHHHHHHHHHHHHHHhhhCCeEEEEeEEEEecCCEEEEEecCCceE
Q 011787 94 LHSSHMYHEAMHSFASHGVKFSSVEVDLPAMMAQKDKAVSNLTRGIEGLFKKNKVTYVKGYGKFISPSEVSVDTIEGGNT 173 (477)
Q Consensus 94 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~v~~~~g~~~ 173 (477)
+..+..+....++.+. .....++++..+ ..+...++ .
T Consensus 440 ---------------------------~~~~~~~~~~~i~~~~-----~~~~~~v~i~~~---------~~v~~~~~--~ 476 (729)
T 1o94_A 440 ---------------------------WSYHRDYRETQITKLL-----KKNKESQLALGQ---------KPMTADDV--L 476 (729)
T ss_dssp ---------------------------GHHHHHHHHHHHHHHH-----HHSTTCEEECSC---------CCCCHHHH--H
T ss_pred ---------------------------HHHHHHHHHHHHHHhh-----cccCCceEEEeC---------eEEehhhc--c
Confidence 1111111111111100 011124444322 12333333 4
Q ss_pred EEEecEEEEccCCCC--------C--CCCCCccCCceEecchhhhccc-CCCCeeEEEc--ccHHHHHHHHHHHHcCCcE
Q 011787 174 VVKGKNIIIATGSDV--------K--SLPGITIDEKRIVSSTGALALN-EVPKKLVVIG--AGYIGLEMGSVWARLGSEV 240 (477)
Q Consensus 174 ~i~~d~lvlAtG~~~--------~--~~~g~~~~~~~~~~~~~~~~~~-~~~~~v~IiG--~G~~g~e~a~~l~~~g~~V 240 (477)
.+.||+||||||+.+ . .+||.+.....+++..++.... ..+++|+||| +|.+|+|+|..|++.|.+|
T Consensus 477 ~~~~d~vviAtG~~~~~~~~~~p~~~~ipG~~~~~~~v~~~~~~l~~~~~~gk~VvVIG~GgG~~g~e~A~~l~~~G~~V 556 (729)
T 1o94_A 477 QYGADKVIIATGARWNTDGTNCLTHDPIPGADASLPDQLTPEQVMDGKKKIGKRVVILNADTYFMAPSLAEKLATAGHEV 556 (729)
T ss_dssp TSCCSEEEECCCEEECSSCCCTTTSSCCTTCCTTSTTEECHHHHHHCCSCCCSEEEEEECCCSSHHHHHHHHHHHTTCEE
T ss_pred ccCCCEEEEcCCCCcccccccCccCCCCCCccccCCCEEEHHHHhcCCCCCCCeEEEEcCCCCchHHHHHHHHHHcCCEE
Confidence 578999999999983 2 2344432134677777765543 3468999999 9999999999999999999
Q ss_pred EEEEeCCCcCC--CCCHHHHHHHHHHHHhcCcEEEeCceEEEEEEcCCeEEEEEeecCC----------------CceEE
Q 011787 241 TVVEFAADIVP--SMDGEIRKQFQRSLEKQKMKFMLKTKVVGVDLSGDGVKLTLEPAAG----------------GEKTI 302 (477)
Q Consensus 241 tli~~~~~~~~--~~~~~~~~~~~~~l~~~gv~~~~~~~v~~i~~~~~~~~v~~~~~~~----------------~~~~~ 302 (477)
+++++.+ +++ .++.. ...+.+.|+++||++++++.+++++. +++.+....... ++..+
T Consensus 557 tlv~~~~-l~~~~~~~~~-~~~~~~~l~~~GV~i~~~~~v~~i~~--~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 632 (729)
T 1o94_A 557 TIVSGVH-LANYMHFTLE-YPNMMRRLHELHVEELGDHFCSRIEP--GRMEIYNIWGDGSKRTYRGPGVSPRDANTSHRW 632 (729)
T ss_dssp EEEESSC-TTHHHHHTTC-HHHHHHHHHHTTCEEECSEEEEEEET--TEEEEEETTCSCSCCCCCCTTSCSSCCCCCCEE
T ss_pred EEEeccc-cccccccccc-HHHHHHHHHhCCCEEEcCcEEEEEEC--CeEEEEEecCCceEEecccccccccccCCccee
Confidence 9999988 554 23333 45678888999999999999999963 344443211000 11234
Q ss_pred EEcCEEEEeecCCCCCCCCCccccceeecCCCCeecCCCCCCCCCCeEEecccCCCCCchhHHHHHHHHHHHHHcCCCCC
Q 011787 303 LEADVVLVSAGRTPFTAGLGLDKIGVETDKMGRIPVNERFATNIPGVYAIGDVIPGPMLAHKAEEDGVACVEFLAGKHGH 382 (477)
Q Consensus 303 i~~D~vi~a~G~~p~~~~l~~~~~gl~~~~~g~i~vd~~l~t~~~~vya~GD~~~~~~~~~~A~~~g~~aa~~i~~~~~~ 382 (477)
+++|.||+|+|.+|++.+ ++.++ ..+|++++|++|+|||+|||+. +..+..|+.||+.||.+|.+..
T Consensus 633 i~aD~Vv~a~G~~p~~~l--~~~l~--------~~vd~~~~t~~~~VyAiGD~~~-~~~~~~A~~~G~~aA~~i~~~l-- 699 (729)
T 1o94_A 633 IEFDSLVLVTGRHSECTL--WNELK--------ARESEWAENDIKGIYLIGDAEA-PRLIADATFTGHRVAREIEEAN-- 699 (729)
T ss_dssp EECSEEEEESCEEECCHH--HHHHH--------HTGGGTGGGTCCEEEECGGGTS-CCCHHHHHHHHHHHHHTTTSSC--
T ss_pred eeCCEEEECCCCCCChHH--HHHHh--------hhcccccccCCCCeEEEeCccc-hhhHHHHHHHHHHHHHHhhhhc--
Confidence 999999999999999874 33321 1378899999999999999986 5667789999999999998653
Q ss_pred CCCCCCce
Q 011787 383 VDYDKVPG 390 (477)
Q Consensus 383 ~~~~~~p~ 390 (477)
.+..+|+
T Consensus 700 -~~~~~p~ 706 (729)
T 1o94_A 700 -PQIAIPY 706 (729)
T ss_dssp -TTSCCCC
T ss_pred -ccCCCCe
Confidence 3444453
No 84
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=99.98 E-value=3.8e-33 Score=275.88 Aligned_cols=284 Identities=17% Similarity=0.215 Sum_probs=202.3
Q ss_pred CcEEEECCChHHHHHHHHHHHCC--CeEEEEecCCCCCceeeccCccCchhhhhhhHHHHHHHhhhhhCCccccccccCh
Q 011787 44 NDVVVIGGGPGGYVAAIKAAQLG--LKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSVEVDL 121 (477)
Q Consensus 44 ~dvvIIGgG~AGl~aA~~l~~~g--~~V~lie~~~~~GG~~~~~~~~p~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 121 (477)
++|||||||+||++||.+|++.+ .+|+|||+++.... |..... .............++
T Consensus 3 KkVvIIG~G~AG~~aA~~L~~~~~~~~Vtlie~~~~~~~------~p~~~~--------------v~~g~~~~~~~~~~~ 62 (401)
T 3vrd_B 3 RKVVVVGGGTGGATAAKYIKLADPSIEVTLIEPNETYYT------CYMSNE--------------VIGGDRELASLRVGY 62 (401)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSCSSEEC------STTHHH--------------HHHTSSCGGGGEECS
T ss_pred CEEEEECCcHHHHHHHHHHHhcCcCCeEEEEeCCCCCCC------ccCHHH--------------HhcCCCCHHHHhhCH
Confidence 58999999999999999999875 68999999654211 110000 000011111112222
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhCCeEEEEeEEEEecCCEEEEEecCCceEEEEecEEEEccCCCCC--CCCCCccCC-
Q 011787 122 PAMMAQKDKAVSNLTRGIEGLFKKNKVTYVKGYGKFISPSEVSVDTIEGGNTVVKGKNIIIATGSDVK--SLPGITIDE- 198 (477)
Q Consensus 122 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~v~~~~g~~~~i~~d~lvlAtG~~~~--~~~g~~~~~- 198 (477)
. .+.+.+++++.+++..+|.....+.+.+| .++.||+||||||+++. .+||.....
T Consensus 63 ~-------------------~~~~~gv~~i~~~v~~id~~~~~v~~~~g--~~i~yd~LviAtG~~~~~~~i~G~~e~~~ 121 (401)
T 3vrd_B 63 D-------------------GLRAHGIQVVHDSALGIDPDKKLVKTAGG--AEFAYDRCVVAPGIDLLYDKIEGYSEALA 121 (401)
T ss_dssp H-------------------HHHHTTCEEECSCEEEEETTTTEEEETTS--CEEECSEEEECCCEEECGGGSBTCCSGGG
T ss_pred H-------------------HHHHCCCEEEEeEEEEEEccCcEEEeccc--ceeecceeeeccCCccccCCccCchhhcc
Confidence 1 23346999999999999998888888888 78999999999999874 456644211
Q ss_pred -c---eEecchhhhccc------CCCCeeEEEccc----------HHHHHHHHHHHHcC--CcEEEEEeCCCcC--CCCC
Q 011787 199 -K---RIVSSTGALALN------EVPKKLVVIGAG----------YIGLEMGSVWARLG--SEVTVVEFAADIV--PSMD 254 (477)
Q Consensus 199 -~---~~~~~~~~~~~~------~~~~~v~IiG~G----------~~g~e~a~~l~~~g--~~Vtli~~~~~~~--~~~~ 254 (477)
. ...+.++...+. ..+..+++.+++ ..+.+++..+++.+ .+|++++..+.+. +.++
T Consensus 122 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~v~~~~~~~i~~~~a~~e~~~~~a~~~~~~~~~~~v~i~~~~~~~~~~~~~~ 201 (401)
T 3vrd_B 122 AKLPHAWKAGEQTALLRRQLESMDDGGVVIIAPPAPPFRCPPGPYERASQIAHYLKAHKSKSKVIILDNSQTFSKQAQFT 201 (401)
T ss_dssp GTSCCCSSCSHHHHHHHHHHHHSCTTCEEEEECCSSSCBCTTHHHHHHHHHHHHHHHHCTTCEEEEECSSSSCTTHHHHH
T ss_pred cCccceeccHHHHHHHHHHHHhcccCCcEEEecCCccEEeehHHHHHHHHHHHHHHhcCCCCEEEEEccccccccccccc
Confidence 1 122223332221 123334433221 24567777777665 5789998887763 3456
Q ss_pred HHHHHHHHHHHHhcCcEEEeCceEEEEEEcCCeEEEEEeecCCCceEEEEcCEEEEeecCCCCCCCCCccccceeecCCC
Q 011787 255 GEIRKQFQRSLEKQKMKFMLKTKVVGVDLSGDGVKLTLEPAAGGEKTILEADVVLVSAGRTPFTAGLGLDKIGVETDKMG 334 (477)
Q Consensus 255 ~~~~~~~~~~l~~~gv~~~~~~~v~~i~~~~~~~~v~~~~~~~~~~~~i~~D~vi~a~G~~p~~~~l~~~~~gl~~~~~g 334 (477)
+.+.+.+.+.+++.||++++++++..++.+++...+++. +++++++|.+++++|.+|+.. +++.++ .+++|
T Consensus 202 ~~~~~~~~~~l~~~gi~v~~~~~v~~v~~~~~~~~v~~~-----~g~~i~~D~vi~~~g~~~~~~---~~~~gl-~~~~G 272 (401)
T 3vrd_B 202 KGWERLYGFGTENALIEWHPGPDAAVVKTDTEAMTVETS-----FGETFKAAVINLIPPQRAGKI---AQSASL-TNDSG 272 (401)
T ss_dssp HHHHHHSCTTSTTCSEEEECTTTTCEEEEETTTTEEEET-----TSCEEECSEEEECCCEEECHH---HHHTTC-CCTTS
T ss_pred HHHHHHHHHHHHhcCcEEEeCceEEEEEecccceEEEcC-----CCcEEEeeEEEEecCcCCchh---Hhhccc-cccCC
Confidence 667777777788999999999999999887777677664 678999999999999999743 677787 47789
Q ss_pred CeecCCC-CC-CCCCCeEEecccCCC---CCchhHHHHHHHHHHHHHc
Q 011787 335 RIPVNER-FA-TNIPGVYAIGDVIPG---PMLAHKAEEDGVACVEFLA 377 (477)
Q Consensus 335 ~i~vd~~-l~-t~~~~vya~GD~~~~---~~~~~~A~~~g~~aa~~i~ 377 (477)
+|.||++ || |++|||||+|||+.. |.+++.|.+||+++|+||+
T Consensus 273 ~i~VD~~tl~~t~~p~VfAiGDva~~~~~pk~a~~A~~qa~v~A~ni~ 320 (401)
T 3vrd_B 273 WCPVDIRTFESSLQPGIHVIGDACNAAPMPKSAYSANSQAKVAAAAVV 320 (401)
T ss_dssp SBCBCTTTCBBSSSTTEEECGGGBCCTTSCBSHHHHHHHHHHHHHHHH
T ss_pred CEEECCCcceecCCCCEEEecccccCCCCCchHHHHHHHHHHHHHHHH
Confidence 9999987 66 899999999999853 5789999999999999997
No 85
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=99.97 E-value=5.7e-31 Score=284.88 Aligned_cols=280 Identities=18% Similarity=0.217 Sum_probs=198.3
Q ss_pred CCCcEEEECCChHHHHHHHHHHHCCCeEEEEecCCCCCceeeccCccCchhhhhhhHHHHHHHhhhhhCCccccccccCh
Q 011787 42 DENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSVEVDL 121 (477)
Q Consensus 42 ~~~dvvIIGgG~AGl~aA~~l~~~g~~V~lie~~~~~GG~~~~~~~~p~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 121 (477)
.++||+||||||||++||..|++.|++|+|||+++.+||+|.+ | |.. .+... ..
T Consensus 127 ~~~dVvVIGaGpAGl~AA~~la~~G~~V~lie~~~~~GG~~~~--~-~k~-~i~~~----------------------~~ 180 (965)
T 2gag_A 127 VHTDVLVVGAGPAGLAAAREASRSGARVMLLDERAEAGGTLLD--T-AGE-QIDGM----------------------DS 180 (965)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSSGGGGG--S-SCC-EETTE----------------------EH
T ss_pred cCCCEEEECCCHHHHHHHHHHHhCCCcEEEEeCCCCCCceecc--C-Ccc-ccCCC----------------------CH
Confidence 4589999999999999999999999999999999899999873 2 210 00000 00
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhh-CCeEEEEe-EEEEecCCEE-E-EE---------ec----CCceEEEEecEEEEcc
Q 011787 122 PAMMAQKDKAVSNLTRGIEGLFKK-NKVTYVKG-YGKFISPSEV-S-VD---------TI----EGGNTVVKGKNIIIAT 184 (477)
Q Consensus 122 ~~~~~~~~~~~~~~~~~~~~~~~~-~~v~~~~~-~~~~~~~~~~-~-v~---------~~----~g~~~~i~~d~lvlAt 184 (477)
. . +.......+.+ .+++++.+ .+..++.... . +. .. ++....+.||+|||||
T Consensus 181 ~---~--------~~~~~~~~l~~~~~v~~~~~~~V~~i~~~~~~~~v~~~~~~~~v~~~~~~~~~~~~~i~~d~lVlAT 249 (965)
T 2gag_A 181 S---A--------WIEQVTSELAEAEETTHLQRTTVFGSYDANYLIAAQRRTVHLDGPSGPGVSRERIWHIRAKQVVLAT 249 (965)
T ss_dssp H---H--------HHHHHHHHHHHSTTEEEESSEEEEEEETTTEEEEEEECSTTCSSCCCTTCCSEEEEEEEEEEEEECC
T ss_pred H---H--------HHHHHHHHHhhcCCcEEEeCCEEEeeecCCceeeeEeecccccccccccCCCCceEEEECCEEEECC
Confidence 0 0 00111122233 47887766 3444443221 1 11 10 1222479999999999
Q ss_pred CCCCCC--CCCCccCCceEecchhhhc----ccC-CCCeeEEEcccHHHHHHHHHHHHcCCcEEEEEeCCCcCCCCCHHH
Q 011787 185 GSDVKS--LPGITIDEKRIVSSTGALA----LNE-VPKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIVPSMDGEI 257 (477)
Q Consensus 185 G~~~~~--~~g~~~~~~~~~~~~~~~~----~~~-~~~~v~IiG~G~~g~e~a~~l~~~g~~Vtli~~~~~~~~~~~~~~ 257 (477)
|+.|+. +|+.+ ...+++..++.. ... .+++++|||+|++|+|+|..|++.|.+|+++++.+.+++ .
T Consensus 250 Gs~p~~~~ipG~~--~~gv~~~~~~~~~l~~~~~~~gk~vvViGgG~~g~E~A~~L~~~G~~Vtvv~~~~~~~~----~- 322 (965)
T 2gag_A 250 GAHERPIVFENND--RPGIMLAGAVRSYLNRYGVRAGARIAVATTNDSAYELVRELAATGGVVAVIDARSSISA----A- 322 (965)
T ss_dssp CEEECCCCCBTCC--STTEEEHHHHHHHHHTTCEESCSSEEEEESSTTHHHHHHHHGGGTCCSEEEESCSSCCH----H-
T ss_pred CCccCCCCCCCCC--CCCEEEhHHHHHHHHhcCCCCCCeEEEEcCCHHHHHHHHHHHHcCCcEEEEECCCccch----h-
Confidence 998754 44443 345666544322 112 358999999999999999999999999999999887652 2
Q ss_pred HHHHHHHHHhcCcEEEeCceEEEEEEc-CCeE-EEEEee--cC--CCceEEEEcCEEEEeecCCCCCCCCCccccceeec
Q 011787 258 RKQFQRSLEKQKMKFMLKTKVVGVDLS-GDGV-KLTLEP--AA--GGEKTILEADVVLVSAGRTPFTAGLGLDKIGVETD 331 (477)
Q Consensus 258 ~~~~~~~l~~~gv~~~~~~~v~~i~~~-~~~~-~v~~~~--~~--~~~~~~i~~D~vi~a~G~~p~~~~l~~~~~gl~~~ 331 (477)
.+.+++.||++++++.++++..+ ++++ .+++.+ .. ++..+++++|.|++++|++||++. ++.
T Consensus 323 ----~~~l~~~GV~v~~~~~v~~i~~~~~~~v~~v~~~~~~~~~~~G~~~~i~~D~Vv~a~G~~P~~~l--~~~------ 390 (965)
T 2gag_A 323 ----AAQAVADGVQVISGSVVVDTEADENGELSAIVVAELDEARELGGTQRFEADVLAVAGGFNPVVHL--HSQ------ 390 (965)
T ss_dssp ----HHHHHHTTCCEEETEEEEEEEECTTSCEEEEEEEEECTTCCEEEEEEEECSEEEEECCEEECCHH--HHH------
T ss_pred ----HHHHHhCCeEEEeCCEeEEEeccCCCCEEEEEEEeccccCCCCceEEEEcCEEEECCCcCcChHH--HHh------
Confidence 56678899999999999999874 3433 455543 10 122378999999999999999875 232
Q ss_pred CCCCeecCCCCC-----CCCCCeEEecccCCCCCchhHHHHHHHHHHHHHcC
Q 011787 332 KMGRIPVNERFA-----TNIPGVYAIGDVIPGPMLAHKAEEDGVACVEFLAG 378 (477)
Q Consensus 332 ~~g~i~vd~~l~-----t~~~~vya~GD~~~~~~~~~~A~~~g~~aa~~i~~ 378 (477)
..|+|.+|++++ |+.|+|||+|||++.+.+. .|..||+.||.+|++
T Consensus 391 ~~g~i~vd~~~~~~v~~ts~p~IyAaGD~a~~~~l~-~A~~~G~~aA~~i~~ 441 (965)
T 2gag_A 391 RQGKLDWDTTIHAFVPADAVANQHLAGAMTGRLDTA-SALSTGAATGAAAAT 441 (965)
T ss_dssp TTCCEEEETTTTEEEECSCCTTEEECGGGGTCCSHH-HHHHHHHHHHHHHHH
T ss_pred CCCcEEEcCcccccccCCCCCCEEEEEecCCchhHH-HHHHHHHHHHHHHHH
Confidence 246788998887 8999999999999887765 899999999999974
No 86
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=99.97 E-value=2.7e-30 Score=258.74 Aligned_cols=300 Identities=13% Similarity=0.097 Sum_probs=191.6
Q ss_pred CCCcEEEECCChHHHHHHHHHHHCCC--eEEEEecCCCCCceeeccCcc------Cch-------hhhh-------hhHH
Q 011787 42 DENDVVVIGGGPGGYVAAIKAAQLGL--KTTCIEKRGALGGTCLNVGCI------PSK-------ALLH-------SSHM 99 (477)
Q Consensus 42 ~~~dvvIIGgG~AGl~aA~~l~~~g~--~V~lie~~~~~GG~~~~~~~~------p~~-------~l~~-------~~~~ 99 (477)
..+||+|||||++|+++|..|++.|. +|+|+|+.+.+||.|.+.++. |.. .+.. ....
T Consensus 5 ~~~dV~IIGaG~aGl~aA~~L~~~G~~~~V~v~E~~~~~GG~~~~~~~~~~~~~ip~~~~~~~~~~~~~g~~~~~~~~~~ 84 (447)
T 2gv8_A 5 TIRKIAIIGAGPSGLVTAKALLAEKAFDQVTLFERRGSPGGVWNYTSTLSNKLPVPSTNPILTTEPIVGPAALPVYPSPL 84 (447)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHTTTCCSEEEEECSSSSSSTTCSCCSCCCSCCCSSBCCTTCCCCCBCCSSSCCBCCCCC
T ss_pred CCCEEEEECccHHHHHHHHHHHhcCCCCCeEEEecCCCCCCeecCCCCCCcccccccccccccccccccccccCCccCch
Confidence 46899999999999999999999999 999999988999999877642 110 0000 0000
Q ss_pred HHHH-------HhhhhhCCccccc-cccChHHHHHHHHHHHHHHHHHHHHHhhhCCeEEEEe-EEEEe--cCCEEEEEec
Q 011787 100 YHEA-------MHSFASHGVKFSS-VEVDLPAMMAQKDKAVSNLTRGIEGLFKKNKVTYVKG-YGKFI--SPSEVSVDTI 168 (477)
Q Consensus 100 ~~~~-------~~~~~~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-~~~~~--~~~~~~v~~~ 168 (477)
+..+ ...+..+.+.... .......+ .+.+....++.+..+..+ .+..+ +.+.+.|.+.
T Consensus 85 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-----------~~~l~~~~~~~~~~i~~~t~V~~v~~~~~~~~V~~~ 153 (447)
T 2gv8_A 85 YRDLQTNTPIELMGYCDQSFKPQTLQFPHRHTI-----------QEYQRIYAQPLLPFIKLATDVLDIEKKDGSWVVTYK 153 (447)
T ss_dssp CTTCBCSSCHHHHSCTTCCCCTTCCSSCBHHHH-----------HHHHHHHHGGGGGGEECSEEEEEEEEETTEEEEEEE
T ss_pred hhhhccCCCHHHhccCCCCCCCCCCCCCCHHHH-----------HHHHHHHHHHhhCeEEeCCEEEEEEeCCCeEEEEEe
Confidence 0000 0000001100000 00111111 122222222223333222 34333 2445666655
Q ss_pred C---Cc-eEEEEecEEEEccCC--CCC--CCCCCccC----CceEecchhhhccc-CCCCeeEEEcccHHHHHHHHHHHH
Q 011787 169 E---GG-NTVVKGKNIIIATGS--DVK--SLPGITID----EKRIVSSTGALALN-EVPKKLVVIGAGYIGLEMGSVWAR 235 (477)
Q Consensus 169 ~---g~-~~~i~~d~lvlAtG~--~~~--~~~g~~~~----~~~~~~~~~~~~~~-~~~~~v~IiG~G~~g~e~a~~l~~ 235 (477)
+ |. ..++.||+||+|||. .|. .+||.... ...++++.++.... ..+++|+|||+|.+|+|+|..|++
T Consensus 154 ~~~~G~~~~~~~~d~VVvAtG~~s~p~~p~i~G~~~~~~~~~g~v~~~~~~~~~~~~~~k~VvVvG~G~sg~e~A~~l~~ 233 (447)
T 2gv8_A 154 GTKAGSPISKDIFDAVSICNGHYEVPYIPNIKGLDEYAKAVPGSVLHSSLFREPELFVGESVLVVGGASSANDLVRHLTP 233 (447)
T ss_dssp ESSTTCCEEEEEESEEEECCCSSSSBCBCCCBTHHHHHHHSTTSEEEGGGCCCGGGGTTCCEEEECSSHHHHHHHHHHTT
T ss_pred ecCCCCeeEEEEeCEEEECCCCCCCCCCCCCCChhhhhccCCccEEEecccCChhhcCCCEEEEEccCcCHHHHHHHHHH
Confidence 4 53 347999999999998 553 34443210 12355555444332 258999999999999999999999
Q ss_pred cCCc-EEEEEeCCCcCCCCCHHHHHHHHHHHHhcCcEEEeCceEEEEEEcCCeEEEEEeecCCCceEE-EEcCEEEEeec
Q 011787 236 LGSE-VTVVEFAADIVPSMDGEIRKQFQRSLEKQKMKFMLKTKVVGVDLSGDGVKLTLEPAAGGEKTI-LEADVVLVSAG 313 (477)
Q Consensus 236 ~g~~-Vtli~~~~~~~~~~~~~~~~~~~~~l~~~gv~~~~~~~v~~i~~~~~~~~v~~~~~~~~~~~~-i~~D~vi~a~G 313 (477)
.+.+ |+++++.+.+ ++..||.+ ...|+++..+++. +++. +++. +++|.||+|+|
T Consensus 234 ~~~~~V~l~~r~~~~---------------l~~~~i~~--~~~v~~~~~~~~~--v~~~-----dG~~~~~~D~vi~atG 289 (447)
T 2gv8_A 234 VAKHPIYQSLLGGGD---------------IQNESLQQ--VPEITKFDPTTRE--IYLK-----GGKVLSNIDRVIYCTG 289 (447)
T ss_dssp TSCSSEEEECTTCCS---------------CBCSSEEE--ECCEEEEETTTTE--EEET-----TTEEECCCSEEEECCC
T ss_pred HhCCcEEEEeCCCCc---------------CCCCCeEE--ecCeEEEecCCCE--EEEC-----CCCEeccCCEEEECCC
Confidence 9999 9999988754 35567764 5788888654443 4443 4445 79999999999
Q ss_pred CCCCCCC-----CCccccceeecCCCCeecCCCCC---CCCCCeEEecccCCCCCchhHHHHHHHHHHHHHcCC
Q 011787 314 RTPFTAG-----LGLDKIGVETDKMGRIPVNERFA---TNIPGVYAIGDVIPGPMLAHKAEEDGVACVEFLAGK 379 (477)
Q Consensus 314 ~~p~~~~-----l~~~~~gl~~~~~g~i~vd~~l~---t~~~~vya~GD~~~~~~~~~~A~~~g~~aa~~i~~~ 379 (477)
++|+.++ +.....++.. ++.+.++.+.+ ++.|+||++||+.... .++.|..||+++|++|.+.
T Consensus 290 ~~~~~~~l~~~~l~~~~~~i~~--~~~~~~~~~~~v~~~~~p~l~~~G~~~~~~-~~~~a~~qa~~~a~~~~g~ 360 (447)
T 2gv8_A 290 YLYSVPFPSLAKLKSPETKLID--DGSHVHNVYQHIFYIPDPTLAFVGLALHVV-PFPTSQAQAAFLARVWSGR 360 (447)
T ss_dssp BCCCCCCHHHHSCCSTTTCCCS--SSSSCCSEETTTEETTCTTEEESSCCBSSC-HHHHHHHHHHHHHHHHTTS
T ss_pred CCcCCCCCcccccccccCceec--CCCcccccccccccCCCCcEEEEecccccc-CchHHHHHHHHHHHHHcCC
Confidence 9999887 4311123333 34566666655 7899999999998764 7889999999999999875
No 87
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=99.97 E-value=6.1e-30 Score=268.24 Aligned_cols=280 Identities=21% Similarity=0.261 Sum_probs=199.2
Q ss_pred hhhcccCCCcceeccccccCCCCCCCCCCCcEEEECCChHHHHHHHHHHHCCCeEEEEecCCCCCceeeccCccCchhhh
Q 011787 15 SRNLSNSSNGNVFKYSFSLTRGFASASDENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALL 94 (477)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dvvIIGgG~AGl~aA~~l~~~g~~V~lie~~~~~GG~~~~~~~~p~~~l~ 94 (477)
..|..|+..+++...+ ..+....+||+|||||+||++||..|++.|++|+|||+++.+||++....++|.+.
T Consensus 351 ~~C~~np~~~~e~~~~------~~~~~~~~~vvIIGgG~AGl~aA~~l~~~g~~V~lie~~~~~gg~~~~~~~~~~~~-- 422 (671)
T 1ps9_A 351 TSCLVNPRACHETKMP------ILPAVQKKNLAVVGAGPAGLAFAINAAARGHQVTLFDAHSEIGGQFNIAKQIPGKE-- 422 (671)
T ss_dssp CCCSSCTTTTCTTTSC------CCSCSSCCEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSSSCTTHHHHTTSTTCT--
T ss_pred eEEEeCcccccccccC------CCCCCCCCeEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCCCCeeeccccCCCHH--
Confidence 4577777776664432 12334568999999999999999999999999999999989999865544443221
Q ss_pred hhhHHHHHHHhhhhhCCccccccccChHHHHHHHHHHHHHHHHHHHHHhhhCCeEEEEeEEEEecCCEEEEEecCCceEE
Q 011787 95 HSSHMYHEAMHSFASHGVKFSSVEVDLPAMMAQKDKAVSNLTRGIEGLFKKNKVTYVKGYGKFISPSEVSVDTIEGGNTV 174 (477)
Q Consensus 95 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~v~~~~g~~~~ 174 (477)
.+.. +..++...+++.+++++.++.... ..
T Consensus 423 -------------------------~~~~-----------~~~~~~~~~~~~gv~~~~~~~v~~--------------~~ 452 (671)
T 1ps9_A 423 -------------------------EFYE-----------TLRYYRRMIEVTGVTLKLNHTVTA--------------DQ 452 (671)
T ss_dssp -------------------------THHH-----------HHHHHHHHHHHHTCEEEESCCCCS--------------SS
T ss_pred -------------------------HHHH-----------HHHHHHHHHHHcCCEEEeCcEecH--------------HH
Confidence 0111 111223445566888877652110 12
Q ss_pred E-EecEEEEccCCCCCCCCCCccCCceEecchhhhccc-CCCCeeEEEcccHHHHHHHHHHHHcCC--------------
Q 011787 175 V-KGKNIIIATGSDVKSLPGITIDEKRIVSSTGALALN-EVPKKLVVIGAGYIGLEMGSVWARLGS-------------- 238 (477)
Q Consensus 175 i-~~d~lvlAtG~~~~~~~g~~~~~~~~~~~~~~~~~~-~~~~~v~IiG~G~~g~e~a~~l~~~g~-------------- 238 (477)
+ .||+||||||++|..++..+.+...+++..+..... ..+++|+|||+|.+|+|+|..|++.|.
T Consensus 453 ~~~~d~lviAtG~~p~~~~i~G~~~~~v~~~~~~l~~~~~~~~~VvVIGgG~~g~E~A~~l~~~G~~vtv~~~~~~~~~g 532 (671)
T 1ps9_A 453 LQAFDETILASGIVPRTPPIDGIDHPKVLSYLDVLRDKAPVGNKVAIIGCGGIGFDTAMYLSQPGESTSQNIAGFCNEWG 532 (671)
T ss_dssp SCCSSEEEECCCEEECCCCCBTTTSTTEEEHHHHHTSCCCCCSEEEEECCHHHHHHHHHHHTCCSSCGGGCHHHHHHHTT
T ss_pred hhcCCEEEEccCCCcCCCCCCCCCCCcEeeHHHHhhCCCCCCCeEEEECCChhHHHHHHHHHhcCCCcccchhhhhhhhc
Confidence 3 899999999998864432222334567766655433 358999999999999999999998774
Q ss_pred -----------------------cEEEEEeCCCcCC-CCCHHHHHHHHHHHHhcCcEEEeCceEEEEEEcCCeEEEEEee
Q 011787 239 -----------------------EVTVVEFAADIVP-SMDGEIRKQFQRSLEKQKMKFMLKTKVVGVDLSGDGVKLTLEP 294 (477)
Q Consensus 239 -----------------------~Vtli~~~~~~~~-~~~~~~~~~~~~~l~~~gv~~~~~~~v~~i~~~~~~~~v~~~~ 294 (477)
+|+++++.+..+. .+++.....+.+.|+++||++++++++++++ ++++.++ .
T Consensus 533 ~~~~~~~~~~~~~~~~~~~~~~~~v~l~~~~~~~l~~~l~~~~~~~~~~~l~~~GV~v~~~~~v~~i~--~~~v~~~-~- 608 (671)
T 1ps9_A 533 IDSSLQQAGGLSPQGMQIPRSPRQIVMLQRKASKPGQGLGKTTGWIHRTTLLSRGVKMIPGVSYQKID--DDGLHVV-I- 608 (671)
T ss_dssp BCTTCCSGGGBCTTCCCCCCCSSEEEEECSSCSCTTTTSCTTTHHHHHHHHHHTTCEEECSCEEEEEE--TTEEEEE-E-
T ss_pred ccccccccccccccccccCCCCcEEEEEEecchhhccccccccHHHHHHHHHhcCCEEEeCcEEEEEe--CCeEEEe-c-
Confidence 4566666655443 5667777788899999999999999999996 3454443 2
Q ss_pred cCCCceEEEEcCEEEEeecCCCCCCCCCccccceeecCCCCeecCCCCCCCCCCeEEecccCCCC-CchhHHHHHHHHHH
Q 011787 295 AAGGEKTILEADVVLVSAGRTPFTAGLGLDKIGVETDKMGRIPVNERFATNIPGVYAIGDVIPGP-MLAHKAEEDGVACV 373 (477)
Q Consensus 295 ~~~~~~~~i~~D~vi~a~G~~p~~~~l~~~~~gl~~~~~g~i~vd~~l~t~~~~vya~GD~~~~~-~~~~~A~~~g~~aa 373 (477)
+++.+++++|.||+|+|++||+++ ++.+ . ...++||++|||+... ..+..|++||..+|
T Consensus 609 --~G~~~~i~~D~Vi~a~G~~p~~~l--~~~l----~------------~~g~~v~aiGD~~~~~~~~~~~A~~~g~~aA 668 (671)
T 1ps9_A 609 --NGETQVLAVDNVVICAGQEPNRAL--AQPL----I------------DSGKTVHLIGGCDVAMELDARRAIAQGTRLA 668 (671)
T ss_dssp --TTEEEEECCSEEEECCCEEECCTT--HHHH----H------------TTTCCEEECGGGTCCSSCCHHHHHHHHHHHH
T ss_pred --CCeEEEEeCCEEEECCCccccHHH--HHHH----H------------hcCCCEEEECCcCccCchhHHHHHHHHHHHH
Confidence 233468999999999999999875 2321 1 1237899999998654 36889999999999
Q ss_pred HHH
Q 011787 374 EFL 376 (477)
Q Consensus 374 ~~i 376 (477)
.||
T Consensus 669 ~~i 671 (671)
T 1ps9_A 669 LEI 671 (671)
T ss_dssp HHC
T ss_pred HhC
Confidence 986
No 88
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=99.96 E-value=6.7e-29 Score=250.97 Aligned_cols=255 Identities=19% Similarity=0.213 Sum_probs=181.6
Q ss_pred CCCcEEEECCChHHHHHHHHHHHCCCeEEEEecCCCCCceeeccCccCchhhhhhhHHHHHHHhhhhhCCccccccccCh
Q 011787 42 DENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSVEVDL 121 (477)
Q Consensus 42 ~~~dvvIIGgG~AGl~aA~~l~~~g~~V~lie~~~~~GG~~~~~~~~p~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 121 (477)
.++||+|||||+||++||.+|++. ++|+|||+++.+||++...... .+++.. +.
T Consensus 107 ~~~dVvIIGgG~aGl~aA~~L~~~-~~V~vie~~~~~GG~~~~~~~~--------------------~~g~~~-----~~ 160 (493)
T 1y56_A 107 VVVDVAIIGGGPAGIGAALELQQY-LTVALIEERGWLGGDMWLKGIK--------------------QEGFNK-----DS 160 (493)
T ss_dssp EEESCCEECCSHHHHHHHHHHTTT-CCEEEECTTSSSSCSGGGTCSE--------------------ETTTTE-----EH
T ss_pred ccCCEEEECccHHHHHHHHHHHhc-CCEEEEeCCCCCCCeeeccccc--------------------cCCCCC-----CH
Confidence 457999999999999999999999 9999999998999986542110 001100 00
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhCCeEEEEeE-EEEec--CCEEEEEe-cCCceEEEEecEEEEccCCCCCCC--CCCc
Q 011787 122 PAMMAQKDKAVSNLTRGIEGLFKKNKVTYVKGY-GKFIS--PSEVSVDT-IEGGNTVVKGKNIIIATGSDVKSL--PGIT 195 (477)
Q Consensus 122 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~~--~~~~~v~~-~~g~~~~i~~d~lvlAtG~~~~~~--~g~~ 195 (477)
. .+...+...+ +.+++++.+. +..++ ...+.+.. .++....+.||+||||||+.|..+ |+.+
T Consensus 161 ~-----------~~~~~l~~~l-~~~v~~~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~d~lvlAtGa~~~~~~~~g~~ 228 (493)
T 1y56_A 161 R-----------KVVEELVGKL-NENTKIYLETSALGVFDKGEYFLVPVVRGDKLIEILAKRVVLATGAIDSTMLFENND 228 (493)
T ss_dssp H-----------HHHHHHHHTC-CTTEEEETTEEECCCEECSSSEEEEEEETTEEEEEEESCEEECCCEEECCCCCTTTT
T ss_pred H-----------HHHHHHHHHH-hcCCEEEcCCEEEEEEcCCcEEEEEEecCCeEEEEECCEEEECCCCCccCCCCCCCC
Confidence 0 0111122222 4577765543 33332 22233332 344335799999999999988543 4443
Q ss_pred cCCceEecchhhhccc-----CCCCeeEEEcccHHHHHHHHHHHHcCCcEEEEEeCCCcCCCCCHHHHHHHHHHHHhcCc
Q 011787 196 IDEKRIVSSTGALALN-----EVPKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIVPSMDGEIRKQFQRSLEKQKM 270 (477)
Q Consensus 196 ~~~~~~~~~~~~~~~~-----~~~~~v~IiG~G~~g~e~a~~l~~~g~~Vtli~~~~~~~~~~~~~~~~~~~~~l~~~gv 270 (477)
...+++..++..+. ..+++++|+|+|++++| +.+++.||
T Consensus 229 --~~gv~~~~~~~~~~~~~~~~~~~~vvViGgG~~gle----------------------------------~~l~~~GV 272 (493)
T 1y56_A 229 --MPGVFRRDFALEVMNVWEVAPGRKVAVTGSKADEVI----------------------------------QELERWGI 272 (493)
T ss_dssp --STTEEEHHHHHHHHHTSCBCSCSEEEEESTTHHHHH----------------------------------HHHHHHTC
T ss_pred --CCCEEEcHHHHHHHHhcccCCCCEEEEECCCHHHHH----------------------------------HHHHhCCc
Confidence 34566666554321 23589999999999988 45677899
Q ss_pred EEEeCceEEEEEEcCCeEEEEEeecCCCceEEEEcCEEEEeecCCCCCCCCCccccceee--cCCCCee-cCCCCCCCCC
Q 011787 271 KFMLKTKVVGVDLSGDGVKLTLEPAAGGEKTILEADVVLVSAGRTPFTAGLGLDKIGVET--DKMGRIP-VNERFATNIP 347 (477)
Q Consensus 271 ~~~~~~~v~~i~~~~~~~~v~~~~~~~~~~~~i~~D~vi~a~G~~p~~~~l~~~~~gl~~--~~~g~i~-vd~~l~t~~~ 347 (477)
++++++.|+++..+++...+.+. +++++++|.|++|+|++|+.++ ++.+|+.+ +++|++. ||++++ +.|
T Consensus 273 ~v~~~~~v~~i~~~~~v~~v~~~-----~g~~i~aD~Vv~a~G~~p~~~l--~~~~g~~~~~~~~g~i~~vd~~~~-s~~ 344 (493)
T 1y56_A 273 DYVHIPNVKRVEGNEKVERVIDM-----NNHEYKVDALIFADGRRPDINP--ITQAGGKLRFRRGYYSPVLDEYHR-IKD 344 (493)
T ss_dssp EEEECSSEEEEECSSSCCEEEET-----TCCEEECSEEEECCCEEECCHH--HHHTTCCEEEETTEEEECCCTTSE-EET
T ss_pred EEEeCCeeEEEecCCceEEEEeC-----CCeEEEeCEEEECCCcCcCchH--HHhcCCCccccCCceeeccccccC-cCC
Confidence 99999999999866543344433 4578999999999999999875 56666654 5678887 899999 999
Q ss_pred CeEEecccCCCCCchhHHHHHHHHHHHHHcCC
Q 011787 348 GVYAIGDVIPGPMLAHKAEEDGVACVEFLAGK 379 (477)
Q Consensus 348 ~vya~GD~~~~~~~~~~A~~~g~~aa~~i~~~ 379 (477)
+|||+|||++.+ ++..|..||++||.+|.+.
T Consensus 345 ~vya~GD~~~~~-~~~~A~~~g~~aa~~i~~~ 375 (493)
T 1y56_A 345 GIYVAGSAVSIK-PHYANYLEGKLVGAYILKE 375 (493)
T ss_dssp TEEECSTTTCCC-CHHHHHHHHHHHHHHHHHH
T ss_pred CEEEEeccCCcc-CHHHHHHHHHHHHHHHHHH
Confidence 999999999754 6788999999999999764
No 89
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=99.96 E-value=6.5e-28 Score=245.38 Aligned_cols=303 Identities=21% Similarity=0.275 Sum_probs=193.7
Q ss_pred CCCcEEEECCChHHHHHHHHHH-HCCCeEEEEecCCCCCceeecc---Cc---cCchhhhhhhHHHHHHHhhhhhCCccc
Q 011787 42 DENDVVVIGGGPGGYVAAIKAA-QLGLKTTCIEKRGALGGTCLNV---GC---IPSKALLHSSHMYHEAMHSFASHGVKF 114 (477)
Q Consensus 42 ~~~dvvIIGgG~AGl~aA~~l~-~~g~~V~lie~~~~~GG~~~~~---~~---~p~~~l~~~~~~~~~~~~~~~~~g~~~ 114 (477)
.++||+|||||+||+++|..|+ +.|.+|+|+|+++.+||+|... +| +|+..+..... ... ...+.+.
T Consensus 7 ~~~dVvIIGaG~aGl~aA~~L~~~~G~~v~viE~~~~~GGtw~~~~ypg~~~d~~s~~~~~~~~--~~~---~~~~~~~- 80 (540)
T 3gwf_A 7 HTVDAVVIGAGFGGIYAVHKLHHELGLTTVGFDKADGPGGTWYWNRYPGALSDTESHLYRFSFD--RDL---LQESTWK- 80 (540)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCCEEEEESSSSSCTHHHHCCCTTCEEEEEGGGSSCCSC--HHH---HHHCCCS-
T ss_pred CCCCEEEECcCHHHHHHHHHHHHcCCCCEEEEECCCCCCCcccccCCCCceecCCcceeeeccc--ccc---ccCCCCc-
Confidence 3589999999999999999999 8899999999999999998643 32 23322211100 000 0011111
Q ss_pred cccccChHHHHHHHHHHHHHHHHHHHHHhhhCCe--EEEEe-EEEEe--cC--CEEEEEecCCceEEEEecEEEEccC--
Q 011787 115 SSVEVDLPAMMAQKDKAVSNLTRGIEGLFKKNKV--TYVKG-YGKFI--SP--SEVSVDTIEGGNTVVKGKNIIIATG-- 185 (477)
Q Consensus 115 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v--~~~~~-~~~~~--~~--~~~~v~~~~g~~~~i~~d~lvlAtG-- 185 (477)
....+..+ +...+....++.++ ++..+ .+..+ +. ..+.|.+.+| .++.||+||+|||
T Consensus 81 -~~~~~~~e-----------i~~~l~~~~~~~g~~~~i~~~~~V~~i~~~~~~~~~~V~~~~G--~~i~ad~lV~AtG~~ 146 (540)
T 3gwf_A 81 -TTYITQPE-----------ILEYLEDVVDRFDLRRHFKFGTEVTSALYLDDENLWEVTTDHG--EVYRAKYVVNAVGLL 146 (540)
T ss_dssp -BSEEEHHH-----------HHHHHHHHHHHTTCGGGEEESCCEEEEEEETTTTEEEEEETTS--CEEEEEEEEECCCSC
T ss_pred -ccCCCHHH-----------HHHHHHHHHHHcCCcceeEeccEEEEEEEeCCCCEEEEEEcCC--CEEEeCEEEECCccc
Confidence 11111222 22233344445555 44433 33332 22 4678888888 5799999999999
Q ss_pred CCCC--CCCCCc-cCCceEecchhhhcccCCCCeeEEEcccHHHHHHHHHHHHcCCcEEEEEeCCCc-CCCCCHHHHHHH
Q 011787 186 SDVK--SLPGIT-IDEKRIVSSTGALALNEVPKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADI-VPSMDGEIRKQF 261 (477)
Q Consensus 186 ~~~~--~~~g~~-~~~~~~~~~~~~~~~~~~~~~v~IiG~G~~g~e~a~~l~~~g~~Vtli~~~~~~-~~~~~~~~~~~~ 261 (477)
+.|. .+||.+ ..+..+++..........+++|+|||+|.+|+|+|..|++.+.+|++++|.+.+ +|.+++++...+
T Consensus 147 s~p~~p~ipG~~~f~g~~~~~~~~~~~~~~~~krV~VIG~G~sgve~a~~l~~~~~~Vtv~~r~~~~i~p~~~~~~~~~~ 226 (540)
T 3gwf_A 147 SAINFPNLPGLDTFEGETIHTAAWPEGKSLAGRRVGVIGTGSTGQQVITSLAPEVEHLTVFVRTPQYSVPVGNRPVNPEQ 226 (540)
T ss_dssp CSBCCCCCTTGGGCCSEEEEGGGCCSSCCCTTSEEEEECCSHHHHHHHHHHTTTCSEEEEEESSCCCEEECCCCBCCHHH
T ss_pred ccCCCCCCCCccccCCCEEEeecCCCccccccceEEEECCCchHHHHHHHHHhhCCEEEEEECCCCccccCccCCCCHHH
Confidence 5663 456655 334456666555555667899999999999999999999999999999999984 444332221111
Q ss_pred HHHH----------------------------------------------------------------------------
Q 011787 262 QRSL---------------------------------------------------------------------------- 265 (477)
Q Consensus 262 ~~~l---------------------------------------------------------------------------- 265 (477)
++.+
T Consensus 227 ~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (540)
T 3gwf_A 227 IAEIKADYDRIWERAKNSAVAFGFEESTLPAMSVSEEERNRIFQEAWDHGGGFRFMFGTFGDIATDEAANEAAASFIRAK 306 (540)
T ss_dssp HHHHHHTHHHHHHHHHTSSSCSSSCCCCCCGGGSCHHHHHHHHHHHHHHCCHHHHHHTSCSCTTTCHHHHHHHHHHHHHH
T ss_pred HHHHHhccHHHHHHHHhccccccccccchhhhhCCHHHHHHHHHHHHhcccchhhhhhhhhhhhcCHHHHHHHHHHHHHH
Confidence 1111
Q ss_pred ----------------------------------HhcCcEEEe--CceEEEEEEcCCeEEEEEeecCCCceEEEEcCEEE
Q 011787 266 ----------------------------------EKQKMKFML--KTKVVGVDLSGDGVKLTLEPAAGGEKTILEADVVL 309 (477)
Q Consensus 266 ----------------------------------~~~gv~~~~--~~~v~~i~~~~~~~~v~~~~~~~~~~~~i~~D~vi 309 (477)
.+.+|+++. ...|.++. ++++. +. +++++++|.||
T Consensus 307 ~~~~v~dp~~~~~l~P~~~g~kR~~~~~~y~~~l~~~nV~lv~~~~~~I~~it--~~gv~--~~-----dG~~~~~DvIV 377 (540)
T 3gwf_A 307 VAEIIEDPETARKLMPKGLFAKRPLCDSGYYEVYNRPNVEAVAIKENPIREVT--AKGVV--TE-----DGVLHELDVLV 377 (540)
T ss_dssp HHHHCCSHHHHHHHCCCSCCCSSCEEESSTGGGGGSTTEEEEETTTSCEEEEC--SSEEE--ET-----TCCEEECSEEE
T ss_pred HHHHcCCHHHHHhCCCCCCCccccCCCccHHHHhcCCCEEEEeCCCCCccEEe--cCeEE--cC-----CCCEEECCEEE
Confidence 134777775 67788884 34433 32 67889999999
Q ss_pred EeecCCCCCCCCCccccceeecCCCCeecCC--------C--C-CCCCCCeEEe-cccCCCCCchhHHHHHHHHHHHHHc
Q 011787 310 VSAGRTPFTAGLGLDKIGVETDKMGRIPVNE--------R--F-ATNIPGVYAI-GDVIPGPMLAHKAEEDGVACVEFLA 377 (477)
Q Consensus 310 ~a~G~~p~~~~l~~~~~gl~~~~~g~i~vd~--------~--l-~t~~~~vya~-GD~~~~~~~~~~A~~~g~~aa~~i~ 377 (477)
+|||++++... +.. +.+...+++.+++ + + -.+.||+|.+ |..+........+..|+.++++.|.
T Consensus 378 ~ATGf~~~~~~--~~~--~~i~g~~G~~l~~~w~~~~~~y~g~~v~gfPN~f~~~Gp~~~~~s~~~~~e~q~~~i~~~i~ 453 (540)
T 3gwf_A 378 FATGFDAVDGN--YRR--IEIRGRDGLHINDHWDGQPTSYLGVSTANFPNWFMVLGPNGPFTNLPPSIETQVEWISDTIG 453 (540)
T ss_dssp ECCCBSCSSHH--HHT--SEEECGGGCBHHHHTSSSCCCBTTTBCTTCTTEEESSCSSCBCSCHHHHHHHHHHHHHHHHH
T ss_pred ECCccCccccC--cCc--ceEECCCCcCHHHhhccChhhccccccCCCCceEEEecCCCCCccHHHHHHHHHHHHHHHHH
Confidence 99999998732 222 2222222333332 1 2 2578999999 8776544456678888888888774
No 90
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=99.95 E-value=6.3e-27 Score=238.36 Aligned_cols=195 Identities=24% Similarity=0.213 Sum_probs=126.3
Q ss_pred CCCCcEEEECCChHHHHHHHHHHHCCCeEEEEecCCCCCceeeccCccCchhhhhhhHHHHHHHhhhhhCCccccccccC
Q 011787 41 SDENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSVEVD 120 (477)
Q Consensus 41 ~~~~dvvIIGgG~AGl~aA~~l~~~g~~V~lie~~~~~GG~~~~~~~~p~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~~ 120 (477)
+.++||+|||||+||+++|.+|++.|.+|+|||+++.+||+|. ..+.|..........+..........+........+
T Consensus 7 ~~~~dVvIIGaG~aGl~aA~~L~~~g~~v~iiE~~~~~GGtw~-~~~yPg~~~d~~~~~y~~~f~~~~~~~~~~~~~~~~ 85 (545)
T 3uox_A 7 SPALDAVVIGAGVTGIYQAFLINQAGMKVLGIEAGEDVGGTWY-WNRYPGCRLDTESYAYGYFALKGIIPEWEWSENFAS 85 (545)
T ss_dssp CCSEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTHHH-HCCCTTCBCSSCHHHHCHHHHTTSSTTCCCSBSSCB
T ss_pred CCCCCEEEECccHHHHHHHHHHHhCCCCEEEEeCCCCCCCccc-cCCCCceeecCchhhcccccCcccccCCCccccCCC
Confidence 3468999999999999999999999999999999999999984 556665433233333222111100001111111122
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhhhCCe--EEEEe-EEEEe---c-CCEEEEEecCCceEEEEecEEEEccC--CCCC--
Q 011787 121 LPAMMAQKDKAVSNLTRGIEGLFKKNKV--TYVKG-YGKFI---S-PSEVSVDTIEGGNTVVKGKNIIIATG--SDVK-- 189 (477)
Q Consensus 121 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v--~~~~~-~~~~~---~-~~~~~v~~~~g~~~~i~~d~lvlAtG--~~~~-- 189 (477)
..++... +....++.++ .+..+ .+..+ + ...+.|.+.+| .++.||+||+||| +.|.
T Consensus 86 ~~ei~~y-----------l~~~~~~~~l~~~i~~~~~V~~~~~~~~~~~w~V~~~~G--~~~~ad~lV~AtG~~s~p~~p 152 (545)
T 3uox_A 86 QPEMLRY-----------VNRAADAMDVRKHYRFNTRVTAARYVENDRLWEVTLDNE--EVVTCRFLISATGPLSASRMP 152 (545)
T ss_dssp HHHHHHH-----------HHHHHHHHTCGGGEECSCCEEEEEEEGGGTEEEEEETTT--EEEEEEEEEECCCSCBC---C
T ss_pred HHHHHHH-----------HHHHHHHcCCcCcEEECCEEEEEEEeCCCCEEEEEECCC--CEEEeCEEEECcCCCCCCcCC
Confidence 2222222 2222222232 22222 22222 2 34678888888 7899999999999 6663
Q ss_pred CCCCCc-cCCceEecchhhhc-------ccCCCCeeEEEcccHHHHHHHHHHHHcCCcEEEEEeCCCc
Q 011787 190 SLPGIT-IDEKRIVSSTGALA-------LNEVPKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADI 249 (477)
Q Consensus 190 ~~~g~~-~~~~~~~~~~~~~~-------~~~~~~~v~IiG~G~~g~e~a~~l~~~g~~Vtli~~~~~~ 249 (477)
.+||.+ ..+..+++...... ....+++|+|||+|.+|+|+|..|++.+.+||+++|.+.+
T Consensus 153 ~ipG~~~f~g~~~h~~~~~~~~~~~~~~~~~~~krV~VIG~G~tgve~a~~la~~~~~Vtv~~r~~~~ 220 (545)
T 3uox_A 153 DIKGIDSFKGESFHSSRWPTDAEGAPKGVDFTGKRVGVIGTGATGVQIIPIAAETAKELYVFQRTPNW 220 (545)
T ss_dssp CCTTGGGCCSEEEEGGGCCBCTTSCBSCCCCBTCEEEEECCSHHHHHHHHHHTTTBSEEEEEESSCCC
T ss_pred CCCCccccCCCeEEcccccccccccccccccCCCeEEEECCCccHHHHHHHHHhhCCEEEEEEcCCCc
Confidence 456655 33445666555444 4556899999999999999999999999999999999974
No 91
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=99.94 E-value=1.4e-25 Score=228.70 Aligned_cols=193 Identities=19% Similarity=0.220 Sum_probs=125.5
Q ss_pred CCCCcEEEECCChHHHHHHHHHHHCCCeEEEEecCCCCCceeecc---Cc---cCchhhhhhhHHHHHHHhhhhhCCccc
Q 011787 41 SDENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGALGGTCLNV---GC---IPSKALLHSSHMYHEAMHSFASHGVKF 114 (477)
Q Consensus 41 ~~~~dvvIIGgG~AGl~aA~~l~~~g~~V~lie~~~~~GG~~~~~---~~---~p~~~l~~~~~~~~~~~~~~~~~g~~~ 114 (477)
..++||+|||||+||+++|.+|++.|.+|+|||+++.+||+|... +| +|+..+..... ... ...+.+.
T Consensus 19 ~~~~dVvIIGaG~aGl~aA~~L~~~G~~v~iiE~~~~~GGtw~~~~ypg~~~dv~s~~y~~~f~--~~~---~~~~~~~- 92 (549)
T 4ap3_A 19 TTSYDVVVVGAGIAGLYAIHRFRSQGLTVRAFEAASGVGGVWYWNRYPGARCDVESIDYSYSFS--PEL---EQEWNWS- 92 (549)
T ss_dssp -CEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTHHHHCCCTTCBCSSCTTTSSCCSC--HHH---HHHCCCS-
T ss_pred CCCCCEEEECchHHHHHHHHHHHhCCCCEEEEeCCCCCCCccccCCCCCceeCCCchhcccccc--ccc---ccCCCCc-
Confidence 346899999999999999999999999999999999999998632 33 34332211100 000 0011111
Q ss_pred cccccChHHHHHHHHHHHHHHHHHHHHHhhhCCe--EEEEe-EEEEe--c--CCEEEEEecCCceEEEEecEEEEccC--
Q 011787 115 SSVEVDLPAMMAQKDKAVSNLTRGIEGLFKKNKV--TYVKG-YGKFI--S--PSEVSVDTIEGGNTVVKGKNIIIATG-- 185 (477)
Q Consensus 115 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v--~~~~~-~~~~~--~--~~~~~v~~~~g~~~~i~~d~lvlAtG-- 185 (477)
....+..+ +..++....++.++ ++..+ .+..+ + ...+.|.+.+| .++.||+||+|||
T Consensus 93 -~~~~~~~e-----------i~~yl~~~~~~~g~~~~i~~~~~V~~i~~~~~~~~w~V~~~~G--~~i~ad~lV~AtG~~ 158 (549)
T 4ap3_A 93 -EKYATQPE-----------ILAYLEHVADRFDLRRDIRFDTRVTSAVLDEEGLRWTVRTDRG--DEVSARFLVVAAGPL 158 (549)
T ss_dssp -SSSCBHHH-----------HHHHHHHHHHHTTCGGGEECSCCEEEEEEETTTTEEEEEETTC--CEEEEEEEEECCCSE
T ss_pred -cCCCCHHH-----------HHHHHHHHHHHcCCCccEEECCEEEEEEEcCCCCEEEEEECCC--CEEEeCEEEECcCCC
Confidence 11112222 22233344444454 33333 33333 2 23678888888 6799999999999
Q ss_pred CCCC--CCCCCcc-CCceEecchhh-hcccCCCCeeEEEcccHHHHHHHHHHHHcCCcEEEEEeCCCc-CCCC
Q 011787 186 SDVK--SLPGITI-DEKRIVSSTGA-LALNEVPKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADI-VPSM 253 (477)
Q Consensus 186 ~~~~--~~~g~~~-~~~~~~~~~~~-~~~~~~~~~v~IiG~G~~g~e~a~~l~~~g~~Vtli~~~~~~-~~~~ 253 (477)
+.|. .+||.+. .+..+++.... ......+++|+|||+|.+|+|+|..|++.+.+|++++|.+.+ +|..
T Consensus 159 s~p~~p~ipG~~~f~g~~~~~~~~~~~~~~~~~krV~VIG~G~sgve~a~~l~~~~~~Vtv~~r~~~~ilp~~ 231 (549)
T 4ap3_A 159 SNANTPAFDGLDRFTGDIVHTARWPHDGVDFTGKRVGVIGTGSSGIQSIPIIAEQAEQLFVFQRSANYSIPAG 231 (549)
T ss_dssp EECCCCCCTTGGGCCSEEEEGGGCCTTCCCCBTCEEEEECCSHHHHHHHHHHHHHBSEEEEEESSCCCEEECC
T ss_pred CCCCCCCCCCcccCCCceEEeccccccccccCCCEEEEECCCchHHHHHHHHHhhCCEEEEEECCCCccccCc
Confidence 6663 4566653 33445555433 234446899999999999999999999999999999999974 4433
No 92
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=99.93 E-value=1.5e-25 Score=229.37 Aligned_cols=308 Identities=19% Similarity=0.259 Sum_probs=185.2
Q ss_pred CCCcEEEECCChHHHHHHHHHHHCCCeEEEEecCCCCCceeeccCccCchhhhhhhHHHHHH--HhhhhhCCcccccccc
Q 011787 42 DENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEA--MHSFASHGVKFSSVEV 119 (477)
Q Consensus 42 ~~~dvvIIGgG~AGl~aA~~l~~~g~~V~lie~~~~~GG~~~~~~~~p~~~l~~~~~~~~~~--~~~~~~~g~~~~~~~~ 119 (477)
.++||+|||||++|+++|..|++.|.+|+|+|+++.+||+|. ..+.|...+......+... ......+.+ .....
T Consensus 15 ~~~dVvIIGaG~aGl~aA~~L~~~G~~v~iiE~~~~~GG~w~-~~~~pg~~~d~~~~~~~~~f~~~~~~~~~~--~~~~~ 91 (542)
T 1w4x_A 15 EEVDVLVVGAGFSGLYALYRLRELGRSVHVIETAGDVGGVWY-WNRYPGARCDIESIEYCYSFSEEVLQEWNW--TERYA 91 (542)
T ss_dssp SEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTHHH-HCCCTTCBCSSCTTTSSCCSCHHHHHHCCC--CBSSC
T ss_pred CCCCEEEECccHHHHHHHHHHHhCCCCEEEEeCCCCCCCccc-ccCCCceeecccccccccccChhhhhccCc--ccccC
Confidence 468999999999999999999999999999999999999984 3445533221111100000 000001111 01111
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHHhhhCC--eEEEEe-EEEE---ec-CCEEEEEecCCceEEEEecEEEEccCC--CCC-
Q 011787 120 DLPAMMAQKDKAVSNLTRGIEGLFKKNK--VTYVKG-YGKF---IS-PSEVSVDTIEGGNTVVKGKNIIIATGS--DVK- 189 (477)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~--v~~~~~-~~~~---~~-~~~~~v~~~~g~~~~i~~d~lvlAtG~--~~~- 189 (477)
+..++..+ +....++.+ .++..+ .+.. .+ ...+.|.+.+| .++.||+||+|||. .|.
T Consensus 92 ~~~~i~~y-----------l~~~~~~~~l~~~i~~~~~V~~~~~~~~~~~w~V~~~~G--~~~~ad~vV~AtG~~s~p~~ 158 (542)
T 1w4x_A 92 SQPEILRY-----------INFVADKFDLRSGITFHTTVTAAAFDEATNTWTVDTNHG--DRIRARYLIMASGQLSVPQL 158 (542)
T ss_dssp BHHHHHHH-----------HHHHHHHTTGGGGEECSCCEEEEEEETTTTEEEEEETTC--CEEEEEEEEECCCSCCCCCC
T ss_pred CHHHHHHH-----------HHHHHHHcCCCceEEcCcEEEEEEEcCCCCeEEEEECCC--CEEEeCEEEECcCCCCCCCC
Confidence 12222211 122222222 222222 2222 22 24678888877 57999999999994 453
Q ss_pred -CCCCCc-cCCceEecchhh-hcccCCCCeeEEEcccHHHHHHHHHHHHcCCcEEEEEeCCCc-CCCCC----HHHHHH-
Q 011787 190 -SLPGIT-IDEKRIVSSTGA-LALNEVPKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADI-VPSMD----GEIRKQ- 260 (477)
Q Consensus 190 -~~~g~~-~~~~~~~~~~~~-~~~~~~~~~v~IiG~G~~g~e~a~~l~~~g~~Vtli~~~~~~-~~~~~----~~~~~~- 260 (477)
.+||++ ..+..+++.... ......+|+|+|||+|.+|++++..+++.+.+|+++.|.+.+ +|..+ ++..+.
T Consensus 159 p~i~G~~~f~G~~~hs~~~~~~~~~~~gk~V~VIG~G~sg~e~a~~l~~~~~~vtv~~r~~~~~~p~~~~~~~~~~~~~~ 238 (542)
T 1w4x_A 159 PNFPGLKDFAGNLYHTGNWPHEPVDFSGQRVGVIGTGSSGIQVSPQIAKQAAELFVFQRTPHFAVPARNAPLDPEFLADL 238 (542)
T ss_dssp CCCTTGGGCCSEEEEGGGCCSSCCCCBTCEEEEECCSHHHHHHHHHHHHHBSEEEEEESSCCCEEECCCCBCCHHHHHHH
T ss_pred CCCCCcccCCCceEECCCCCCchhccCCCEEEEECCCccHHHHHHHHhhcCceEEEEEcCCcccccCCCCCCCHHHHHHH
Confidence 455654 334445555433 123445899999999999999999999999999999998866 23221 111100
Q ss_pred ----------------------------------------------------------------------HHHH------
Q 011787 261 ----------------------------------------------------------------------FQRS------ 264 (477)
Q Consensus 261 ----------------------------------------------------------------------~~~~------ 264 (477)
+.+.
T Consensus 239 ~~~~p~l~~~~~~~~~G~~~~~d~~~~~~~~~~~~~~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (542)
T 1w4x_A 239 KKRYAEFREESRNTPGGTHRYQGPKSALEVSDEELVETLERYWQEGGPDILAAYRDILRDRDANERVAEFIRNKIRNTVR 318 (542)
T ss_dssp HTTHHHHHHHHHTSSSSSCCCCCCSCTTTSCHHHHHHHHHHHHHHCSGGGGGSSTTTTTCHHHHHHHHHHHHHHHHHHCS
T ss_pred HhhCHHHHHHHHhhccccccCccccchhcCCHHHHHHHHHHHHhhcchHHHHHHHHHhcChHHHHHHHHHHHHHHHHHcC
Confidence 0011
Q ss_pred -----------------------------HHhcCcEEE--eCceEEEEEEcCCeEEEEEeecCCCceEEEEcCEEEEeec
Q 011787 265 -----------------------------LEKQKMKFM--LKTKVVGVDLSGDGVKLTLEPAAGGEKTILEADVVLVSAG 313 (477)
Q Consensus 265 -----------------------------l~~~gv~~~--~~~~v~~i~~~~~~~~v~~~~~~~~~~~~i~~D~vi~a~G 313 (477)
+.+.+|+++ .+..|.++. ++++. +. + +++++|.||+|||
T Consensus 319 ~~~~~~~l~P~~~~~~~kr~~~~~~y~~~~~~~~v~lv~~~~~~i~~i~--~~gv~--~~-----d-~~~~~D~ii~atG 388 (542)
T 1w4x_A 319 DPEVAERLVPKGYPFGTKRLILEIDYYEMFNRDNVHLVDTLSAPIETIT--PRGVR--TS-----E-REYELDSLVLATG 388 (542)
T ss_dssp SHHHHHHHSCCSSCSSSSCCEEESSHHHHTTSTTEEEEETTTSCEEEEC--SSEEE--ES-----S-CEEECSEEEECCC
T ss_pred CHHHHHhcCCCCCCccccCCCCCccHHHHhCCCCEEEEecCCCCceEEc--CCeEE--eC-----C-eEEecCEEEEcCC
Confidence 111345555 255677773 34433 32 5 7899999999999
Q ss_pred CCCCCCCCCccccceeecCCCCeecC-------CC--CC-CCCCCeEEe-cccCC--CCCchhHHHHHHHHHHHHHcC
Q 011787 314 RTPFTAGLGLDKIGVETDKMGRIPVN-------ER--FA-TNIPGVYAI-GDVIP--GPMLAHKAEEDGVACVEFLAG 378 (477)
Q Consensus 314 ~~p~~~~l~~~~~gl~~~~~g~i~vd-------~~--l~-t~~~~vya~-GD~~~--~~~~~~~A~~~g~~aa~~i~~ 378 (477)
+++++.. +...++. +.+|....| .+ +. ...||+|++ |+.+. .+.....|..|+++++++|..
T Consensus 389 ~~~~~~~--~~~~~i~-g~~G~~l~~~w~~~~~~y~~~~v~~~Pn~f~~~G~~~~~~~~~~~~~~e~q~~~ia~~i~~ 463 (542)
T 1w4x_A 389 FDALTGA--LFKIDIR-GVGNVALKEKWAAGPRTYLGLSTAGFPNLFFIAGPGSPSALSNMLVSIEQHVEWVTDHIAY 463 (542)
T ss_dssp CCCTTHH--HHTSEEE-CGGGCBHHHHTTTSCCCBTTTBCTTSTTEEESSCTTSSGGGSCHHHHHHHHHHHHHHHHHH
T ss_pred ccccccC--cCceeeE-CCCCCCHHHhhcCchheecccccCCCCceEEEcCCCCCcccccHHHHHHHHHHHHHHHHHH
Confidence 9998654 3332222 223433332 12 12 478999998 99863 445668899999999999863
No 93
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=99.90 E-value=2e-23 Score=182.26 Aligned_cols=152 Identities=22% Similarity=0.260 Sum_probs=132.6
Q ss_pred eeEEEcccHHHHHHHHHHHHcCCcEEEEEeCCCcCC---------CC-----CHHHHHHHHHHHHhcCcEEEeCceEEEE
Q 011787 216 KLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIVP---------SM-----DGEIRKQFQRSLEKQKMKFMLKTKVVGV 281 (477)
Q Consensus 216 ~v~IiG~G~~g~e~a~~l~~~g~~Vtli~~~~~~~~---------~~-----~~~~~~~~~~~l~~~gv~~~~~~~v~~i 281 (477)
+++|||+|++|+++|..|++.|.+|+++++.+..++ .+ ++++.+.+.+.+++.|++++++ +|+++
T Consensus 3 ~vvIIGgG~~Gl~~A~~l~~~g~~v~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~gv~v~~~-~v~~i 81 (180)
T 2ywl_A 3 DVIVVGGGPSGLSAALFLARAGLKVLVLDGGRSKVKGVSRVPNYPGLLDEPSGEELLRRLEAHARRYGAEVRPG-VVKGV 81 (180)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCEEEEECSCCTTTTCSCCCCSTTCTTCCCHHHHHHHHHHHHHHTTCEEEEC-CCCEE
T ss_pred eEEEECCCHHHHHHHHHHHHCCCcEEEEeCCCCcccCchhhhccCCCcCCCCHHHHHHHHHHHHHHcCCEEEeC-EEEEE
Confidence 689999999999999999999999999999876552 23 4688889999999999999999 99999
Q ss_pred EEcCCeEEEEEeecCCCceEEEEcCEEEEeecCCCCCCCCCccccceeecCCCCeecCCCCCCCCCCeEEecccCCCCC-
Q 011787 282 DLSGDGVKLTLEPAAGGEKTILEADVVLVSAGRTPFTAGLGLDKIGVETDKMGRIPVNERFATNIPGVYAIGDVIPGPM- 360 (477)
Q Consensus 282 ~~~~~~~~v~~~~~~~~~~~~i~~D~vi~a~G~~p~~~~l~~~~~gl~~~~~g~i~vd~~l~t~~~~vya~GD~~~~~~- 360 (477)
+.+++.+.+++. ++ ++++|.||+|+|..|+. ++..|++++ +|.+.||+++||+.|+|||+|||+..+.
T Consensus 82 ~~~~~~~~v~~~-----~g-~i~ad~vI~A~G~~~~~----~~~~g~~~~-~g~i~vd~~~~t~~~~i~a~GD~~~~~~~ 150 (180)
T 2ywl_A 82 RDMGGVFEVETE-----EG-VEKAERLLLCTHKDPTL----PSLLGLTRR-GAYIDTDEGGRTSYPRVYAAGVARGKVPG 150 (180)
T ss_dssp EECSSSEEEECS-----SC-EEEEEEEEECCTTCCHH----HHHHTCCEE-TTEECCCTTCBCSSTTEEECGGGGTCCSC
T ss_pred EEcCCEEEEEEC-----CC-EEEECEEEECCCCCCCc----cccCCCCcc-CceEEeCCCCCcCCCCEEEeecccCcchh
Confidence 887766666543 34 89999999999999953 466778888 8899999999999999999999998876
Q ss_pred chhHHHHHHHHHHHHHcCC
Q 011787 361 LAHKAEEDGVACVEFLAGK 379 (477)
Q Consensus 361 ~~~~A~~~g~~aa~~i~~~ 379 (477)
+++.|..||+.||.||.+.
T Consensus 151 ~~~~A~~~g~~aa~~i~~~ 169 (180)
T 2ywl_A 151 HAIISAGDGAYVAVHLVSD 169 (180)
T ss_dssp CHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHhHHHHHHHHHHH
Confidence 8999999999999999853
No 94
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A*
Probab=99.85 E-value=5.2e-20 Score=186.07 Aligned_cols=216 Identities=19% Similarity=0.255 Sum_probs=133.5
Q ss_pred EEEEEecC---CceEEEEecEEEEccCCCCCCCCCCccCCceEecchhhhc------ccCCCCeeEEEcccHHHHHHHHH
Q 011787 162 EVSVDTIE---GGNTVVKGKNIIIATGSDVKSLPGITIDEKRIVSSTGALA------LNEVPKKLVVIGAGYIGLEMGSV 232 (477)
Q Consensus 162 ~~~v~~~~---g~~~~i~~d~lvlAtG~~~~~~~g~~~~~~~~~~~~~~~~------~~~~~~~v~IiG~G~~g~e~a~~ 232 (477)
.++|.+.+ |...++.+++||+|||..|..+...+..+..+++.+.... ....+|+|+|||+|.+|+|++..
T Consensus 185 ~~~V~~~~~~~g~~~~~~ar~vVlatG~~P~iP~~~~~~g~v~Hss~y~~~~~~~~~~~~~gKrV~VVG~G~SA~ei~~~ 264 (501)
T 4b63_A 185 FFTVRSRNVETGEISARRTRKVVIAIGGTAKMPSGLPQDPRIIHSSKYCTTLPALLKDKSKPYNIAVLGSGQSAAEIFHD 264 (501)
T ss_dssp EEEEEEEETTTCCEEEEEEEEEEECCCCEECCCTTSCCCTTEEEGGGHHHHHHHHSCCTTSCCEEEEECCSHHHHHHHHH
T ss_pred eEEEEEecCCCceEEEEEeCEEEECcCCCCCCCCCCCCCcceeeccccccchhhccccccCCcEEEEECCcHHHHHHHHH
Confidence 36666543 4567899999999999877654444444555555543332 22458999999999999999999
Q ss_pred HHHc--CCcEEEEEeCCCcCCCC---------CHHH-----------HHH--------------------HHHHH-H---
Q 011787 233 WARL--GSEVTVVEFAADIVPSM---------DGEI-----------RKQ--------------------FQRSL-E--- 266 (477)
Q Consensus 233 l~~~--g~~Vtli~~~~~~~~~~---------~~~~-----------~~~--------------------~~~~l-~--- 266 (477)
|++. +.+|+++.|++.+.|.. .++. ... +.+.+ +
T Consensus 265 L~~~~~~~~v~~~~R~~~~~p~~~s~~~~~~f~p~~~~~f~~l~~~~r~~~~~~~~~~~~~~v~~~li~~i~~~~y~~~~ 344 (501)
T 4b63_A 265 LQKRYPNSRTTLIMRDSAMRPSDDSPFVNEIFNPERVDKFYSQSAAERQRSLLADKATNYSVVRLELIEEIYNDMYLQRV 344 (501)
T ss_dssp HHHHSTTCEEEEECSSSSCCBCCCCTTGGGGGSTTHHHHHHTSCHHHHHHHHHHTGGGTSSCBCHHHHHHHHHHHHHHHH
T ss_pred HHhcCCCceEEEEeCCCccccccccccchhhcCHHHHHHHHhCCHHHHHHHHHHHHhhhhcccCHHHHHHHHHHHHhhcc
Confidence 9875 67999999988664321 1111 111 11111 0
Q ss_pred ------hcCcEEEeCceEEEEEEcC--CeEEEEEee-------cCCCceEEEEcCEEEEeecCCCCCCCCCccc-cceee
Q 011787 267 ------KQKMKFMLKTKVVGVDLSG--DGVKLTLEP-------AAGGEKTILEADVVLVSAGRTPFTAGLGLDK-IGVET 330 (477)
Q Consensus 267 ------~~gv~~~~~~~v~~i~~~~--~~~~v~~~~-------~~~~~~~~i~~D~vi~a~G~~p~~~~l~~~~-~gl~~ 330 (477)
.....+..+..+..+.... +.+.+.... ...++++++++|.||+|||++|+.....+.. ..+..
T Consensus 345 ~~~~~~~~~~~l~~~~~v~~~~~~~~~~~~~v~~~~~~~~~~~v~~~dg~~~~~D~VI~ATGy~~~~p~~L~~~~~~l~~ 424 (501)
T 4b63_A 345 KNPDETQWQHRILPERKITRVEHHGPQSRMRIHLKSSKPESEGAANDVKETLEVDALMVATGYNRNAHERLLSKVQHLRP 424 (501)
T ss_dssp HCSCGGGCSSEEECSEEEEEEECCSSSSCEEEEEEESCC--------CCCEEEESEEEECCCEECCTHHHHTGGGGGGSS
T ss_pred CCCcccccceeecCCcceeeeeecCCCCeEEEEeeeeEEeCCeeEeCCCeEEECCEEEECcCCCCCCcchhcchhhhcCc
Confidence 0123466666777765433 334443321 1234678999999999999999864211111 12555
Q ss_pred cCCCCeecCCCCC--C------CCCCeEEecccC-----CCCCchhHHHHHHHHHHHHHcC
Q 011787 331 DKMGRIPVNERFA--T------NIPGVYAIGDVI-----PGPMLAHKAEEDGVACVEFLAG 378 (477)
Q Consensus 331 ~~~g~i~vd~~l~--t------~~~~vya~GD~~-----~~~~~~~~A~~~g~~aa~~i~~ 378 (477)
+.+|.+.|+.+++ + ..++||+.|-+- +.|.+...|.+.|.++. .|+|
T Consensus 425 d~~g~~~v~rdy~~~~~~~~~~~~~~i~~qg~~~~thG~~~~~Ls~~a~R~~~I~~-~l~g 484 (501)
T 4b63_A 425 TGQDQWKPHRDYRVEMDPSKVSSEAGIWLQGCNERTHGLSDSLLSVLAVRGGEMVQ-SIFG 484 (501)
T ss_dssp TTCCSCCBCTTSBBCCCTTTBCTTCEEEECSCCHHHHCTTTTSSTTHHHHHHHHHH-HHHH
T ss_pred CcCCCeeeCCCcEEeecCCccCCCceEEecCCCcccCCcchhhHHHHHHHHHHHHH-HHhc
Confidence 6677888887654 2 246799998543 34667777888877653 4444
No 95
>2e5v_A L-aspartate oxidase; archaea, oxidoreductase; HET: FAD; 2.09A {Sulfolobus tokodaii}
Probab=99.83 E-value=1e-21 Score=196.97 Aligned_cols=303 Identities=17% Similarity=0.182 Sum_probs=169.3
Q ss_pred cEEEECCChHHHHHHHHHHHCCCeEEEEecCCCCCcee----------eccCccCchhhhhhh----------------H
Q 011787 45 DVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGALGGTC----------LNVGCIPSKALLHSS----------------H 98 (477)
Q Consensus 45 dvvIIGgG~AGl~aA~~l~~~g~~V~lie~~~~~GG~~----------~~~~~~p~~~l~~~~----------------~ 98 (477)
||+|||||+||++||..|++.|.+|+|+||. ..+|.. .+.++.|.+.+.... .
T Consensus 1 DVvVIG~G~AGl~aA~~la~~G~~V~viek~-~~~g~s~~a~Ggi~~~~~~~d~~~~~~~d~l~~g~~~~d~~~v~~~~~ 79 (472)
T 2e5v_A 1 MIYIIGSGIAGLSAGVALRRAGKKVTLISKR-IDGGSTPIAKGGVAASVGSDDSPELHAQDTIRVGDGLCDVKTVNYVTS 79 (472)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCCEEEECSS-TTCSSGGGCCSCEECCCSTTCCHHHHHHHHHHHHTTCSCHHHHHHHHH
T ss_pred CEEEECCCHHHHHHHHHHHHCCCCEEEEeCC-CCCchHHHHhCCeEEeCCCCCCHHHHHHHHHHhcCCcCCHHHHHHHHH
Confidence 7999999999999999999999999999997 555542 222233322211110 0
Q ss_pred HHHHHHhhhhhCCcccccc-----ccChHHHHHHHHHHHHHHHHHHHHHhhhCCeEEEEeE-EEEe--cCCEE-EEEecC
Q 011787 99 MYHEAMHSFASHGVKFSSV-----EVDLPAMMAQKDKAVSNLTRGIEGLFKKNKVTYVKGY-GKFI--SPSEV-SVDTIE 169 (477)
Q Consensus 99 ~~~~~~~~~~~~g~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~--~~~~~-~v~~~~ 169 (477)
.......++..+|+++... ...+.......+.....+...+.+.+++.+++++.++ + .+ +.+.+ .+...+
T Consensus 80 ~~~~~i~~l~~~Gv~~~~~~~~~~g~~~~r~~~~~d~~g~~l~~~L~~~~~~~gv~i~~~~~v-~l~~~~~~v~Gv~v~~ 158 (472)
T 2e5v_A 80 EAKNVIETFESWGFEFEEDLRLEGGHTKRRVLHRTDETGREIFNFLLKLAREEGIPIIEDRLV-EIRVKDGKVTGFVTEK 158 (472)
T ss_dssp HHHHHHHHHHHTTCCCCSSCBCCTTCSSCCEECSSSCHHHHHHHHHHHHHHHTTCCEECCCEE-EEEEETTEEEEEEETT
T ss_pred HHHHHHHHHHHcCCCCCcccccccCcCcCcEEEeCCCCHHHHHHHHHHHHHhCCCEEEECcEE-EEEEeCCEEEEEEEEe
Confidence 0112234445566654320 0000000000000112233334444466789988775 5 44 33433 122222
Q ss_pred CceEEEEecEEEEccCCCCCCCCCCccCCceEecchhh----------hcccCC--CCeeEEEcccHHHHHHHHHHHHcC
Q 011787 170 GGNTVVKGKNIIIATGSDVKSLPGITIDEKRIVSSTGA----------LALNEV--PKKLVVIGAGYIGLEMGSVWARLG 237 (477)
Q Consensus 170 g~~~~i~~d~lvlAtG~~~~~~~g~~~~~~~~~~~~~~----------~~~~~~--~~~v~IiG~G~~g~e~a~~l~~~g 237 (477)
. ..++.+|.||+|||+.+..++.... ....+.+.. .+.... ...++++|+| +++++..++..|
T Consensus 159 ~-~g~~~a~~VVlAtGg~~~~~~~~~~--~~~~tGdgi~~a~~aGa~~~d~e~~q~~p~~~~~ggg--~~~~ae~~~~~G 233 (472)
T 2e5v_A 159 R-GLVEDVDKLVLATGGYSYLYEYSST--QSTNIGDGMAIAFKAGTILADMEFVQFHPTVTSLDGE--VFLLTETLRGEG 233 (472)
T ss_dssp T-EEECCCSEEEECCCCCGGGSSSBSS--CTTCSCHHHHHHHHTTCCEECTTCEEEEEEEECGGGC--CEECCTHHHHTT
T ss_pred C-CCeEEeeeEEECCCCCcccCccccC--CCCCchHHHHHHHHcCCCEeCCcceEEEeEEEccCCC--ceeeehhhcCCc
Confidence 1 1357799999999998754332110 011111111 111111 1234556776 888888888888
Q ss_pred CcEEEEEeCCCcCCCCCHHH--------HHHHHHHHHhcCcEEEeCceEEEEEEcCCeEEEEEeecCCCceEEEE-cCEE
Q 011787 238 SEVTVVEFAADIVPSMDGEI--------RKQFQRSLEKQKMKFMLKTKVVGVDLSGDGVKLTLEPAAGGEKTILE-ADVV 308 (477)
Q Consensus 238 ~~Vtli~~~~~~~~~~~~~~--------~~~~~~~l~~~gv~~~~~~~v~~i~~~~~~~~v~~~~~~~~~~~~i~-~D~v 308 (477)
..+ +..+.+++++.++++. ...+.+.+++.|. +++.... + +. + ...++ .+.+
T Consensus 234 ~~~-v~~~g~rf~~~~~~~~el~~rd~v~~~i~~~~~~~~~-v~ld~~~--~---~~-----~-------~~~~~~~~~~ 294 (472)
T 2e5v_A 234 AQI-INENGERFLFNYDKRGELAPRDILSRAIYIEMLKGHK-VFIDLSK--I---ED-----F-------ERKFPVVAKY 294 (472)
T ss_dssp CEE-EETTCCCGGGGTCTTGGGSCHHHHHHHHHHHHHHTCC-EEEECTT--C---TT-----H-------HHHCHHHHHH
T ss_pred eEE-ECCCCCCCCccCCcccCcCchhHHHHHHHHHHHhCCc-EEEeccc--h---HH-----H-------HHHhHHHHHH
Confidence 777 7778888887666543 5566666666553 2221110 0 00 0 01222 3667
Q ss_pred EEeecCCCCCCCCCccccceeecCCCCeecCCCCCCCCCCeEEecccCC-CC----CchhHHHHHHHHHHHHH
Q 011787 309 LVSAGRTPFTAGLGLDKIGVETDKMGRIPVNERFATNIPGVYAIGDVIP-GP----MLAHKAEEDGVACVEFL 376 (477)
Q Consensus 309 i~a~G~~p~~~~l~~~~~gl~~~~~g~i~vd~~l~t~~~~vya~GD~~~-~~----~~~~~A~~~g~~aa~~i 376 (477)
+.+.|..|+ +.+ .-.+......|+|.||+++||++|||||+|||++ .. .+..+|..+|.+.++.+
T Consensus 295 ~~~~G~dp~-~~i--~v~p~~~~~~GGI~vd~~~~t~ipgLyAaGd~a~~~~hg~~rl~~~sl~~~~v~G~~a 364 (472)
T 2e5v_A 295 LARHGHNYK-VKI--PIFPAAHFVDGGIRVNIRGESNIVNLYAIGEVSDSGLHGANRLASNSLLEGLVFGINL 364 (472)
T ss_dssp HHHTTCCTT-SCE--ECEEEEEEESCEEECCTTCBCSSBTEEECGGGEECSSSTTSCCTTHHHHHHHHHHHHG
T ss_pred HHHhCcCcc-cce--EeehhhceeCCCeEECCCCccccCCEEecchhcccccCCCCCCCcccHHHHHHHHHHH
Confidence 778899999 543 2222223346899999999999999999999986 33 56777777654444443
No 96
>2gqf_A Hypothetical protein HI0933; structural genomics, FAD-utilizing protein, flavoprotein, PS protein structure initiative; HET: FAD; 2.70A {Haemophilus influenzae} SCOP: c.3.1.8 e.74.1.1
Probab=99.73 E-value=1.8e-18 Score=169.71 Aligned_cols=201 Identities=18% Similarity=0.289 Sum_probs=115.2
Q ss_pred CCCcEEEECCChHHHHHHHHHHHCCCeEEEEecCCCCC--------cee--eccCccCchhhhhhhHH---------HHH
Q 011787 42 DENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGALG--------GTC--LNVGCIPSKALLHSSHM---------YHE 102 (477)
Q Consensus 42 ~~~dvvIIGgG~AGl~aA~~l~~~g~~V~lie~~~~~G--------G~~--~~~~~~p~~~l~~~~~~---------~~~ 102 (477)
.++||+|||||+||++||..|++.|.+|+|+|+++.+| |.| .+.++.|.+.+...... ...
T Consensus 3 ~~~dViIIGgG~aGl~aA~~la~~G~~V~vlEk~~~~g~~~~~sggg~cn~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 82 (401)
T 2gqf_A 3 QYSENIIIGAGAAGLFCAAQLAKLGKSVTVFDNGKKIGRKILMSGGGFCNFTNLEVTPAHYLSQNPHFVKSALARYTNWD 82 (401)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHHHGGGGTCCCEESSCCGGGEECSCTTSTHHHHHHSCHHH
T ss_pred CCCCEEEECCcHHHHHHHHHHHhCCCCEEEEeCCCCCchhcEEcCCCeEEccCCccCHHHhccCCHHHHHHHHHhCCHHH
Confidence 46899999999999999999999999999999988774 455 34444443221111000 112
Q ss_pred HHhhhhhCCccccccccChHHHHHHHHHHHHHHHHHHHHHhhhCCeEEEEeE-EEEe--c----CCEEEEEecCCceEEE
Q 011787 103 AMHSFASHGVKFSSVEVDLPAMMAQKDKAVSNLTRGIEGLFKKNKVTYVKGY-GKFI--S----PSEVSVDTIEGGNTVV 175 (477)
Q Consensus 103 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~--~----~~~~~v~~~~g~~~~i 175 (477)
....+...|+.+... ++..+++.. ....+...+...+++.+++++.++ +..+ + .+.+.|.+.++ ++
T Consensus 83 ~~~~~~~~Gi~~~~~--~~g~~~p~~--~~~~l~~~L~~~~~~~Gv~i~~~~~v~~i~~~~~g~~~~~~v~~~~g---~i 155 (401)
T 2gqf_A 83 FISLVAEQGITYHEK--ELGQLFCDE--GAEQIVEMLKSECDKYGAKILLRSEVSQVERIQNDEKVRFVLQVNST---QW 155 (401)
T ss_dssp HHHHHHHTTCCEEEC--STTEEEETT--CTHHHHHHHHHHHHHHTCEEECSCCEEEEEECCSCSSCCEEEEETTE---EE
T ss_pred HHHHHHhCCCceEEC--cCCEEccCC--CHHHHHHHHHHHHHHCCCEEEeCCEEEEEEcccCcCCCeEEEEECCC---EE
Confidence 233444555543210 000000000 012223334455566789988774 4333 3 34567776554 69
Q ss_pred EecEEEEccCCCCCCCCC-------------------CccCCceEecchh-h---hcccCCCCeeEEEc-----------
Q 011787 176 KGKNIIIATGSDVKSLPG-------------------ITIDEKRIVSSTG-A---LALNEVPKKLVVIG----------- 221 (477)
Q Consensus 176 ~~d~lvlAtG~~~~~~~g-------------------~~~~~~~~~~~~~-~---~~~~~~~~~v~IiG----------- 221 (477)
++|+||+|||+.+.+..+ .+.......+.++ + +.....+.++.|+|
T Consensus 156 ~ad~VVlAtG~~s~p~~g~~G~g~~la~~~G~~i~~~~p~l~~~~~~~~~~~~~~l~g~~~~~~~~i~G~~~~~g~~l~t 235 (401)
T 2gqf_A 156 QCKNLIVATGGLSMPGLGATPFGYQIAEQFGIPVIPPRASLVPFTYRETDKFLTALSGISLPVTITALCGKSFYNQLLFT 235 (401)
T ss_dssp EESEEEECCCCSSCGGGTCCSHHHHHHHHTTCCEEEEEEESCCEECCGGGGGGGGGTTCEEEEEEEETTSCEEEEEEEEC
T ss_pred ECCEEEECCCCccCCCCCCChHHHHHHHHCCCCcccCcceeeceecCCchhhcccCCCeeeeeEEEEcCCceEEeCEEEE
Confidence 999999999998732111 0000011112222 2 12222355676669
Q ss_pred ----ccHHHHHHHHHHHHcCCcEEEEEeCCCcCCCCCH
Q 011787 222 ----AGYIGLEMGSVWARLGSEVTVVEFAADIVPSMDG 255 (477)
Q Consensus 222 ----~G~~g~e~a~~l~~~g~~Vtli~~~~~~~~~~~~ 255 (477)
+|+++++++..+.+ |.++++ .++|.++.
T Consensus 236 ~~g~sG~~~l~~s~~~~~-~~~~~i-----~~~p~~~~ 267 (401)
T 2gqf_A 236 HRGISGPAVLQISNYWQP-TESVEI-----DLLPNHNV 267 (401)
T ss_dssp SSEEESHHHHHHTTTCCT-TCCEEE-----ESCSSSCH
T ss_pred CCCccHHHHHHHHHHHhc-CCEEEE-----ECCCCCCH
Confidence 99999999988865 666775 36676664
No 97
>3fpz_A Thiazole biosynthetic enzyme; FAD, mitochondrion, N thiamine biosynthesis, transit peptide, biosynthetic protei; HET: AHZ; 1.82A {Saccharomyces cerevisiae}
Probab=99.72 E-value=1.6e-20 Score=179.82 Aligned_cols=247 Identities=14% Similarity=0.107 Sum_probs=142.2
Q ss_pred CCCcEEEECCChHHHHHHHHHHH--CCCeEEEEecCCCCCceeeccCccCchhhhhhhHHHHHHHhhhhhCCcccccccc
Q 011787 42 DENDVVVIGGGPGGYVAAIKAAQ--LGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSVEV 119 (477)
Q Consensus 42 ~~~dvvIIGgG~AGl~aA~~l~~--~g~~V~lie~~~~~GG~~~~~~~~p~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~ 119 (477)
..+||+||||||||++||++|++ .|++|+|+|+++.+||.+.+.++.+++.++....
T Consensus 64 ~~~DV~IIGaGPAGlsAA~~la~~r~G~~V~viEk~~~~GG~~~~~~~~~~~~~l~~~~--------------------- 122 (326)
T 3fpz_A 64 AVSDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAPGGGSWLGGQLFSAMVMRKPA--------------------- 122 (326)
T ss_dssp TEESEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSSSCCTTTTCCSTTCCCEEEETTT---------------------
T ss_pred cCCCEEEECCCHHHHHHHHHHHHhCCCCeEEEEECCCCCCceEEeCCccCCHHHHHHHH---------------------
Confidence 35899999999999999999974 5999999999999999998888876654332111
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHHhhhCCeEEEEeEEEEecCCEEEEEecCCceEEEEecEEEEccCCCCC--CCCCCc-c
Q 011787 120 DLPAMMAQKDKAVSNLTRGIEGLFKKNKVTYVKGYGKFISPSEVSVDTIEGGNTVVKGKNIIIATGSDVK--SLPGIT-I 196 (477)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~v~~~~g~~~~i~~d~lvlAtG~~~~--~~~g~~-~ 196 (477)
...+++.++++... +. .....+.++++++..+. ..|+.. .
T Consensus 123 --------------------~~~~~e~Gv~~~~~---------------~~--~~~~~~~~~~~~~~~~~~~~~~g~~~~ 165 (326)
T 3fpz_A 123 --------------------HLFLQELEIPYEDE---------------GD--YVVVKHAALFISTVLSKVLQLPNVKLF 165 (326)
T ss_dssp --------------------HHHHHHTTCCCEEC---------------SS--EEEESCHHHHHHHHHHHHHTSTTEEEE
T ss_pred --------------------HHHHHHcCCEEEEC---------------Cc--ceecceeEEEEcchhhhccccccceee
Confidence 01122334443221 11 22333444445544332 233322 1
Q ss_pred CCceEecchhhhcccCCCCeeEEEcccHHHHHHHHHHHHcCCcEEEEEeCCCcCCCCCHHHHHHHHHHHHhcCcEEEeCc
Q 011787 197 DEKRIVSSTGALALNEVPKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIVPSMDGEIRKQFQRSLEKQKMKFMLKT 276 (477)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~~v~IiG~G~~g~e~a~~l~~~g~~Vtli~~~~~~~~~~~~~~~~~~~~~l~~~gv~~~~~~ 276 (477)
....+............+++++++|+|.++++.|..+.+.+.++++..+......... +... ..
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~v~viggg~~av~~a~~~~~~~~~v~i~~~~~~~~~~~~----------~~~~------~~ 229 (326)
T 3fpz_A 166 NATCVEDLVTRPPTEKGEVTVAGVVTNWTLVTQAHGTQCAMDPNVIELAGYKNDGTRD----------LSQK------HG 229 (326)
T ss_dssp TTEEEEEEEEESSCSSSSCEEEEEEEEEHHHHTCTTSSSCCCCEEEEESCBCTTSSBC----------TTSC------CC
T ss_pred cccccceeeccCCcccCCCEEEEEccCceeeehhhhhhhccCcEEEEeeccccccccc----------ceee------cc
Confidence 1111111111122234578999999999999999999999999998876654421110 0000 00
Q ss_pred eEEEEEEcCCeEEEEEeecCCCceEEEEcCEEEEeecCCCCCCCCCccccceeecCCCCeecCCCCCCCCCCeEEecccC
Q 011787 277 KVVGVDLSGDGVKLTLEPAAGGEKTILEADVVLVSAGRTPFTAGLGLDKIGVETDKMGRIPVNERFATNIPGVYAIGDVI 356 (477)
Q Consensus 277 ~v~~i~~~~~~~~v~~~~~~~~~~~~i~~D~vi~a~G~~p~~~~l~~~~~gl~~~~~g~i~vd~~l~t~~~~vya~GD~~ 356 (477)
.+......+...... .....+.+|.+..+.|.+|.. .... .+.+.+|+.++|++|+|||+||++
T Consensus 230 ~~~~~~g~~~~~~~~------~~~~~~~~~~~~~~~g~~~~~---------~~~~-e~~iv~~~~~~t~vpGv~aaGDaa 293 (326)
T 3fpz_A 230 VILSTTGHDGPFGAF------CAKRIVDIDQNQKLGGMKGLD---------MNHA-EHDVVIHSGAYAGVDNMYFAGMEV 293 (326)
T ss_dssp EEEECCCSCSSSCSH------HHHHHHHHCTTCCCCCCCCBC---------HHHH-HHHHHHHCEECTTSBTEEECTHHH
T ss_pred eEEEEecceeeEeec------ceeEEEecCceeeecceeccc---------cccc-CCeEEECCCeEECCCCEEEEchHh
Confidence 111111111111000 012234455555555555422 2222 246788888999999999999987
Q ss_pred C----CCC---chhHHHHHHHHHHHHHcC
Q 011787 357 P----GPM---LAHKAEEDGVACVEFLAG 378 (477)
Q Consensus 357 ~----~~~---~~~~A~~~g~~aa~~i~~ 378 (477)
+ .+. ....++..|+.||+.|+.
T Consensus 294 ~~v~g~~rmGp~~g~mi~SG~~AAe~I~~ 322 (326)
T 3fpz_A 294 AELDGLNRMGPTFGAMALSGVHAAEQILK 322 (326)
T ss_dssp HHHHTCCBCCSCCHHHHHHHHHHHHHHHH
T ss_pred ccccCCCcCchHHHHHHHHHHHHHHHHHH
Confidence 3 221 223456789999998863
No 98
>3k7m_X 6-hydroxy-L-nicotine oxidase; enantiomeric substrates, flavoenzymes, nicotine degradation, oxidoreductase; HET: FAD GP7; 1.95A {Arthrobacter nicotinovorans} PDB: 3k7q_X* 3ng7_X* 3ngc_X* 3nh3_X* 3nho_X* 3nk0_X* 3nk1_X* 3nk2_X* 3nn0_X* 3nn6_X* 3k7t_A*
Probab=99.61 E-value=7.3e-17 Score=160.62 Aligned_cols=97 Identities=21% Similarity=0.204 Sum_probs=71.9
Q ss_pred CHHHHHHHHHHHHhcCcEEEeCceEEEEEEcCCeEEEEEeecCCCceEEEEcCEEEEeec--------CCCCCCCCCccc
Q 011787 254 DGEIRKQFQRSLEKQKMKFMLKTKVVGVDLSGDGVKLTLEPAAGGEKTILEADVVLVSAG--------RTPFTAGLGLDK 325 (477)
Q Consensus 254 ~~~~~~~~~~~l~~~gv~~~~~~~v~~i~~~~~~~~v~~~~~~~~~~~~i~~D~vi~a~G--------~~p~~~~l~~~~ 325 (477)
+..+...+...+++.| +++++++|++|+.+++++.+++. +++++.+|.||+|+| +.|+.+....+.
T Consensus 203 ~~g~~~l~~~~~~~~g-~i~~~~~V~~i~~~~~~v~v~~~-----~g~~~~ad~vi~a~~~~~l~~i~~~p~l~~~~~~~ 276 (431)
T 3k7m_X 203 SNGSADLVDAMSQEIP-EIRLQTVVTGIDQSGDVVNVTVK-----DGHAFQAHSVIVATPMNTWRRIVFTPALPERRRSV 276 (431)
T ss_dssp TTCTHHHHHHHHTTCS-CEESSCCEEEEECSSSSEEEEET-----TSCCEEEEEEEECSCGGGGGGSEEESCCCHHHHHH
T ss_pred CCcHHHHHHHHHhhCC-ceEeCCEEEEEEEcCCeEEEEEC-----CCCEEEeCEEEEecCcchHhheeeCCCCCHHHHHH
Confidence 4445566666667778 99999999999988888877764 455799999999999 888876432222
Q ss_pred cceeecCCCCeecCCCCCCCCCCeEEecccCC
Q 011787 326 IGVETDKMGRIPVNERFATNIPGVYAIGDVIP 357 (477)
Q Consensus 326 ~gl~~~~~g~i~vd~~l~t~~~~vya~GD~~~ 357 (477)
.+... ....++|+..++|+.+++|+.||+..
T Consensus 277 ~~~~~-~~~~~kv~~~~~~~~~~i~~~~d~~~ 307 (431)
T 3k7m_X 277 IEEGH-GGQGLKILIHVRGAEAGIECVGDGIF 307 (431)
T ss_dssp HHHCC-CCCEEEEEEEEESCCTTEEEEBSSSS
T ss_pred HHhCC-CcceEEEEEEECCCCcCceEcCCCCE
Confidence 22221 22358899999999999999999853
No 99
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=99.58 E-value=5.3e-15 Score=134.01 Aligned_cols=157 Identities=19% Similarity=0.259 Sum_probs=110.3
Q ss_pred CeeEEEcccHHHHHHHHHHHHcCCcEEEEEeCCCc-----------------CCCC-------CHHHHHHHHHHHHhc-C
Q 011787 215 KKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADI-----------------VPSM-------DGEIRKQFQRSLEKQ-K 269 (477)
Q Consensus 215 ~~v~IiG~G~~g~e~a~~l~~~g~~Vtli~~~~~~-----------------~~~~-------~~~~~~~~~~~l~~~-g 269 (477)
.+|+|||+|++|+++|..|++.|.+|+++++.... ...+ ...+.+.+.+.+++. |
T Consensus 4 ~dVvVVGgG~aGl~aA~~la~~g~~v~lie~~~~~~G~~~~~~~~~~~~~~~~~~~~d~~g~~~~~~~~~l~~~~~~~~g 83 (232)
T 2cul_A 4 YQVLIVGAGFSGAETAFWLAQKGVRVGLLTQSLDAVMMPFLPPKPPFPPGSLLERAYDPKDERVWAFHARAKYLLEGLRP 83 (232)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTTCCSSCCCSCCCTTCHHHHHCCTTCCCHHHHHHHHHHHHHTCTT
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCCEEEEecCCCcCCcccCccccccchhhHHhhhccCCCCCHHHHHHHHHHHHHcCCC
Confidence 46999999999999999999999999999986211 0001 125667788888886 9
Q ss_pred cEEEeCceEEEEEEcCCeEE-EEEeecCCCceEEEEcCEEEEeecCCCCCCCC---------------------Cccccc
Q 011787 270 MKFMLKTKVVGVDLSGDGVK-LTLEPAAGGEKTILEADVVLVSAGRTPFTAGL---------------------GLDKIG 327 (477)
Q Consensus 270 v~~~~~~~v~~i~~~~~~~~-v~~~~~~~~~~~~i~~D~vi~a~G~~p~~~~l---------------------~~~~~g 327 (477)
++++ +++|+++..+++++. +.+. ++.++++|.||+|+|..++.... .+.+.|
T Consensus 84 v~i~-~~~v~~i~~~~~~v~~v~~~-----~g~~i~a~~VV~A~G~~s~~~~~~G~~~~~~g~~g~~~~~~l~~~l~~~g 157 (232)
T 2cul_A 84 LHLF-QATATGLLLEGNRVVGVRTW-----EGPPARGEKVVLAVGSFLGARLFLGGVVEEAGRLSEASYPDLLEDLSRLG 157 (232)
T ss_dssp EEEE-ECCEEEEEEETTEEEEEEET-----TSCCEECSEEEECCTTCSSCEEEETTEEESEEETTEECCSHHHHHHHHTT
T ss_pred cEEE-EeEEEEEEEeCCEEEEEEEC-----CCCEEECCEEEECCCCChhhceecCCccCCCCCCcccchhhhCHHHHhCC
Confidence 9998 579999987777653 4443 44589999999999996553210 011222
Q ss_pred eeecCCC--------C---------eecC---C-CC-CCCCCCeEEecccCCCCCchhHHHHHHHHHHHHHcC
Q 011787 328 VETDKMG--------R---------IPVN---E-RF-ATNIPGVYAIGDVIPGPMLAHKAEEDGVACVEFLAG 378 (477)
Q Consensus 328 l~~~~~g--------~---------i~vd---~-~l-~t~~~~vya~GD~~~~~~~~~~A~~~g~~aa~~i~~ 378 (477)
+.++... . +..+ . .+ .|++|+|||+|||+ .......|+.||+.+|.+|..
T Consensus 158 ~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~~~~t~~p~iya~G~~a-~~g~~~~~~~~g~~~a~~i~~ 229 (232)
T 2cul_A 158 FRFVEREGEVPETPSTPGYRVRYLAFHPEEWEEKTFRLKRLEGLYAVGLCV-REGDYARMSEEGKRLAEHLLH 229 (232)
T ss_dssp CCEEEEEEEEC-----CCEEEEEEEECGGGEETTTTEETTSBSEEECGGGT-SCCCHHHHHHHHHHHHHHHHH
T ss_pred CeEEccccccCcCCCCCCccCchhhcccCCCCCccccccccccceeeeecc-cCccHHHHHHHHHHHHHHHHh
Confidence 2222110 0 0000 0 11 27999999999999 777888899999999999964
No 100
>3ces_A MNMG, tRNA uridine 5-carboxymethylaminomethyl modificat GIDA, GIDA; tRNA modification, FAD binding domain, structural genomics; 2.41A {Escherichia coli} PDB: 3cp2_A 3g05_A
Probab=99.58 E-value=1.8e-14 Score=146.55 Aligned_cols=167 Identities=19% Similarity=0.299 Sum_probs=99.5
Q ss_pred CCCcEEEECCChHHHHHHHHHHHCCCeEEEEecCC-CCCceeeccCccCchhhhhhhHHHHHHHhh-------hhhCCcc
Q 011787 42 DENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRG-ALGGTCLNVGCIPSKALLHSSHMYHEAMHS-------FASHGVK 113 (477)
Q Consensus 42 ~~~dvvIIGgG~AGl~aA~~l~~~g~~V~lie~~~-~~GG~~~~~~~~p~~~l~~~~~~~~~~~~~-------~~~~g~~ 113 (477)
.++||+|||||+||++||..|++.|.+|+|||++. .+| ..+|.|+................ ....++.
T Consensus 27 ~~yDVIVIGgG~AGl~AAlaLAr~G~kVlLIEk~~~~iG----~~~Cnps~ggia~~~lv~ei~algg~~~~~~d~~gi~ 102 (651)
T 3ces_A 27 DPFDVIIIGGGHAGTEAAMAAARMGQQTLLLTHNIDTLG----QMSCNPAIGGIGKGHLVKEVDALGGLMAKAIDQAGIQ 102 (651)
T ss_dssp SCEEEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTT----CCSSSSEEESTTHHHHHHHHHHTTCSHHHHHHHHEEE
T ss_pred CcCCEEEECChHHHHHHHHHHHhCCCCEEEEeecccccc----cccccccccchhhHHHHHHHHHhccHHHHHhhhcccc
Confidence 46999999999999999999999999999999964 344 23566654322222222211100 0001111
Q ss_pred cccc-------------ccChHHHHHHHHHHHHHHHHHHHHHhhh-CCeEEEEeEEEEe--cCCEE-EEEecCCceEEEE
Q 011787 114 FSSV-------------EVDLPAMMAQKDKAVSNLTRGIEGLFKK-NKVTYVKGYGKFI--SPSEV-SVDTIEGGNTVVK 176 (477)
Q Consensus 114 ~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~v~~~~~~~~~~--~~~~~-~v~~~~g~~~~i~ 176 (477)
+... ..+- ..+...+...+++ .+++++.+.+..+ +.+.+ .|.+.+| ..+.
T Consensus 103 f~~l~~~kgpav~~~r~~~Dr-----------~~~~~~L~e~Le~~~GV~I~~~~V~~L~~e~g~V~GV~t~dG--~~I~ 169 (651)
T 3ces_A 103 FRILNASKGPAVRATRAQADR-----------VLYRQAVRTALENQPNLMIFQQAVEDLIVENDRVVGAVTQMG--LKFR 169 (651)
T ss_dssp EEEESTTSCGGGCEEEEEECH-----------HHHHHHHHHHHHTCTTEEEEECCEEEEEESSSBEEEEEETTS--EEEE
T ss_pred hhhhhcccCcccccchhhCCH-----------HHHHHHHHHHHHhCCCCEEEEEEEEEEEecCCEEEEEEECCC--CEEE
Confidence 1000 0111 1123334455555 6899988877776 34443 5677777 6899
Q ss_pred ecEEEEccCCCCCC--CCCCccCCceEecchhhhcccCCCCeeEEEcccHHHHHHHHHHHHcCCcEEEEE
Q 011787 177 GKNIIIATGSDVKS--LPGITIDEKRIVSSTGALALNEVPKKLVVIGAGYIGLEMGSVWARLGSEVTVVE 244 (477)
Q Consensus 177 ~d~lvlAtG~~~~~--~~g~~~~~~~~~~~~~~~~~~~~~~~v~IiG~G~~g~e~a~~l~~~g~~Vtli~ 244 (477)
+|.||+|||+.+.. ++|... + .+.+ +| +.++++++..|.+.|.+|+.+.
T Consensus 170 Ad~VVLATGt~s~~~~i~G~~~-----~----------~~gr---iG-g~~a~eLA~~L~~lG~~v~~~~ 220 (651)
T 3ces_A 170 AKAVVLTVGTFLDGKIHIGLDN-----Y----------SGGR---AG-DPPSIPLSRRLRELPLRVGRLK 220 (651)
T ss_dssp EEEEEECCSTTTCCEEECC--------------------------------CCHHHHHHHTTTCCEEEEC
T ss_pred CCEEEEcCCCCccCccccCccc-----C----------CCCC---cc-chhhhHHHHHHHhcCCeEEEec
Confidence 99999999998743 333221 0 0223 56 7889999999999999998874
No 101
>2zxi_A TRNA uridine 5-carboxymethylaminomethyl modificat MNMG; modification, 5-carboxymethylaminomethyl uridine, WOBB uridine, FAD; HET: FAD; 2.30A {Aquifex aeolicus} PDB: 2zxh_A* 2e57_A*
Probab=99.45 E-value=4.8e-13 Score=135.57 Aligned_cols=174 Identities=23% Similarity=0.328 Sum_probs=100.6
Q ss_pred CCCcEEEECCChHHHHHHHHHHHCCCeEEEEecCC-CCCceeeccCccCchhhhhhhHHHHHHHh-------hhhhCCcc
Q 011787 42 DENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRG-ALGGTCLNVGCIPSKALLHSSHMYHEAMH-------SFASHGVK 113 (477)
Q Consensus 42 ~~~dvvIIGgG~AGl~aA~~l~~~g~~V~lie~~~-~~GG~~~~~~~~p~~~l~~~~~~~~~~~~-------~~~~~g~~ 113 (477)
.++||+|||||+||++||..|++.|.+|+|||++. .+|+ .+|.|+............... .....++.
T Consensus 26 ~~yDVIVIGgG~AGl~AAlalAr~G~kVlLIEk~~~~iG~----~~Cnps~GGia~g~lv~eldalgg~~~~~~d~~gi~ 101 (637)
T 2zxi_A 26 DEFDVVVIGGGHAGIEAALAAARMGAKTAMFVLNADTIGQ----MSCNPAIGGIAKGIVVREIDALGGEMGKAIDQTGIQ 101 (637)
T ss_dssp GCCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTTC----CCSCSEEECTTHHHHHHHHHHHTCSHHHHHHHHEEE
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCCEEEEEecccccCC----cCccccccccchHHHHHHHHHhhhHHHHHhhhcccc
Confidence 35899999999999999999999999999999964 4553 345554322211111111100 00011111
Q ss_pred ccc------cccChHHHHHHHHHHHHHHHHHHHHHhhh-CCeEEEEeEEEEe--cCCEE-EEEecCCceEEEEecEEEEc
Q 011787 114 FSS------VEVDLPAMMAQKDKAVSNLTRGIEGLFKK-NKVTYVKGYGKFI--SPSEV-SVDTIEGGNTVVKGKNIIIA 183 (477)
Q Consensus 114 ~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~v~~~~~~~~~~--~~~~~-~v~~~~g~~~~i~~d~lvlA 183 (477)
+.. ............ ..+...+...+++ .+++++.+.+..+ +.+.+ .|.+.+| ..+.+|.||+|
T Consensus 102 f~~l~~~kGpav~~~r~~~Dr----~~~~~~L~~~Le~~~GVeI~~~~Vt~L~~e~g~V~GV~t~dG--~~i~AdaVVLA 175 (637)
T 2zxi_A 102 FKMLNTRKGKAVQSPRAQADK----KRYREYMKKVCENQENLYIKQEEVVDIIVKNNQVVGVRTNLG--VEYKTKAVVVT 175 (637)
T ss_dssp EEEESTTSCGGGCEEEEEECH----HHHHHHHHHHHHTCTTEEEEESCEEEEEESSSBEEEEEETTS--CEEECSEEEEC
T ss_pred eeecccccCccccchhhhCCH----HHHHHHHHHHHHhCCCCEEEEeEEEEEEecCCEEEEEEECCC--cEEEeCEEEEc
Confidence 110 000000000000 1223334455555 5899988777764 34443 4777777 68999999999
Q ss_pred cCCCCCC--CCCCccCCceEecchhhhcccCCCCeeEEEcccHHHHHHHHHHHHcCCcEEEEE
Q 011787 184 TGSDVKS--LPGITIDEKRIVSSTGALALNEVPKKLVVIGAGYIGLEMGSVWARLGSEVTVVE 244 (477)
Q Consensus 184 tG~~~~~--~~g~~~~~~~~~~~~~~~~~~~~~~~v~IiG~G~~g~e~a~~l~~~g~~Vtli~ 244 (477)
||+.+.. ++|.. .+. +.+ +| +.++++++..|.+.|.+++.+.
T Consensus 176 TG~~s~~~~~~G~~-----~~~----------~Gr---~G-~~~A~~la~~L~~lG~~v~~l~ 219 (637)
T 2zxi_A 176 TGTFLNGVIYIGDK-----MIP----------GGR---LG-EPRSEGLSDFYRRFDFPLIRFK 219 (637)
T ss_dssp CTTCBTCEEEETTE-----EEE----------CSB---TT-BCCBCTHHHHHHHTTCCCEEEE
T ss_pred cCCCccCceeccce-----ecC----------CCC---CC-chhHHHHHHHHHhcCCceEEec
Confidence 9998743 23321 000 112 23 5577899999999998876654
No 102
>3nlc_A Uncharacterized protein VP0956; FAD-binding protein, NESG, structural genomics, PSI-2, prote structure initiative; HET: FAD; 2.15A {Vibrio parahaemolyticus}
Probab=99.39 E-value=4.1e-12 Score=128.33 Aligned_cols=142 Identities=15% Similarity=0.209 Sum_probs=79.7
Q ss_pred CCCcEEEECCChHHHHHHHHHHHCCCeEEEEecCCCCC-------ceeeccCccCchh-------------------hhh
Q 011787 42 DENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGALG-------GTCLNVGCIPSKA-------------------LLH 95 (477)
Q Consensus 42 ~~~dvvIIGgG~AGl~aA~~l~~~g~~V~lie~~~~~G-------G~~~~~~~~p~~~-------------------l~~ 95 (477)
..+||+|||||++|++||+.|++.|++|+|+|+...++ |.|....|.|... +..
T Consensus 106 ~~~DVVIVGgGpaGL~aA~~La~~G~kV~VlEr~~~~~~R~~~~~g~w~~~~~~~~~~i~~g~gGag~~sdgkl~~~i~~ 185 (549)
T 3nlc_A 106 LTERPIVIGFGPCGLFAGLVLAQMGFNPIIVERGKEVRERTKDTFGFWRKRTLNPESNVQFGEGGAGTFSDGKLYSQVKD 185 (549)
T ss_dssp CCCCCEEECCSHHHHHHHHHHHHTTCCCEEECSSCCHHHHHHHHHHHHHHCCCCTTSSSSSSTTGGGTTSCCCCCCCSCC
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCeEEEEEccCcccccccchhcccccccccccccceeccCCcccccCCceEEEecc
Confidence 45899999999999999999999999999999976552 1121111111000 000
Q ss_pred hhHHHHHHHhhhhhCCccccccccChHHHHHHHHHHHHHHHHHHHHHhhhCCeEEEEeE-EEEe--cCCE-EEEEecCCc
Q 011787 96 SSHMYHEAMHSFASHGVKFSSVEVDLPAMMAQKDKAVSNLTRGIEGLFKKNKVTYVKGY-GKFI--SPSE-VSVDTIEGG 171 (477)
Q Consensus 96 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~--~~~~-~~v~~~~g~ 171 (477)
...........+..+|.+..........+. ......+...+.+.+++.+++++.++ +..+ +.+. ..|.+.+|
T Consensus 186 ~~~~~~~v~~~~~~~G~~~~i~~~~~p~~G---~~~~~~l~~~L~~~l~~~Gv~I~~~t~V~~I~~~~~~v~gV~l~~G- 261 (549)
T 3nlc_A 186 PNFYGRKVITEFVEAGAPEEILYVSKPHIG---TFKLVTMIEKMRATIIELGGEIRFSTRVDDLHMEDGQITGVTLSNG- 261 (549)
T ss_dssp TTCHHHHHHHHHHHTTCCGGGGTBSSCCCC---HHHHHHHHHHHHHHHHHTTCEEESSCCEEEEEESSSBEEEEEETTS-
T ss_pred ccccHHHHHHHHHHcCCCceEeeccccccc---cchHHHHHHHHHHHHHhcCCEEEeCCEEEEEEEeCCEEEEEEECCC-
Confidence 001112223333444443211000000000 00112233444555666799988773 4443 3333 44777777
Q ss_pred eEEEEecEEEEccCCCC
Q 011787 172 NTVVKGKNIIIATGSDV 188 (477)
Q Consensus 172 ~~~i~~d~lvlAtG~~~ 188 (477)
.++.+|+||+|+|..+
T Consensus 262 -~~i~Ad~VVlA~G~~s 277 (549)
T 3nlc_A 262 -EEIKSRHVVLAVGHSA 277 (549)
T ss_dssp -CEEECSCEEECCCTTC
T ss_pred -CEEECCEEEECCCCCh
Confidence 6799999999999876
No 103
>1chu_A Protein (L-aspartate oxidase); flavoenzyme, NAD biosynthesis, FAD, oxidoreductase; 2.20A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1knr_A* 1knp_A*
Probab=99.33 E-value=4.4e-12 Score=128.94 Aligned_cols=39 Identities=26% Similarity=0.448 Sum_probs=34.1
Q ss_pred CCCcEEEECCChHHHHHHHHHHHCCCeEEEEecCCCCCce
Q 011787 42 DENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGALGGT 81 (477)
Q Consensus 42 ~~~dvvIIGgG~AGl~aA~~l~~~g~~V~lie~~~~~GG~ 81 (477)
..+||+|||||+||++||+.|++ |.+|+|+||....+|.
T Consensus 7 ~~~DVvVVG~G~AGl~aAl~la~-G~~V~vlEk~~~~~g~ 45 (540)
T 1chu_A 7 HSCDVLIIGSGAAGLSLALRLAD-QHQVIVLSKGPVTEGS 45 (540)
T ss_dssp EECSEEEECCSHHHHHHHHHHTT-TSCEEEECSSCTTC--
T ss_pred CCCCEEEECccHHHHHHHHHHhc-CCcEEEEECCCCCCCC
Confidence 35899999999999999999999 9999999998776543
No 104
>1rp0_A ARA6, thiazole biosynthetic enzyme; protein ligand complex, biosynthetic protein; HET: AHZ HTO; 1.60A {Arabidopsis thaliana} SCOP: c.3.1.6
Probab=99.33 E-value=5.7e-12 Score=117.64 Aligned_cols=165 Identities=17% Similarity=0.218 Sum_probs=112.1
Q ss_pred CeeEEEcccHHHHHHHHHHHHc-CCcEEEEEeCCCcCCC--------------------------------------CCH
Q 011787 215 KKLVVIGAGYIGLEMGSVWARL-GSEVTVVEFAADIVPS--------------------------------------MDG 255 (477)
Q Consensus 215 ~~v~IiG~G~~g~e~a~~l~~~-g~~Vtli~~~~~~~~~--------------------------------------~~~ 255 (477)
.+|+|||+|++|+.+|..|++. |.+|+++++.+.+... ...
T Consensus 40 ~dVvIIGgG~aGl~aA~~la~~~G~~V~viEk~~~~gg~~~~~~~~~~~~~~~~~~~~~l~~~G~~~~~~~~~~~~~~~~ 119 (284)
T 1rp0_A 40 TDVVVVGAGSAGLSAAYEISKNPNVQVAIIEQSVSPGGGAWLGGQLFSAMIVRKPAHLFLDEIGVAYDEQDTYVVVKHAA 119 (284)
T ss_dssp EEEEEECCSHHHHHHHHHHHTSTTSCEEEEESSSSCCTTTTCCSTTCCCEEEETTTHHHHHHHTCCCEECSSEEEESCHH
T ss_pred cCEEEECccHHHHHHHHHHHHcCCCeEEEEECCCCCCCceecCCcchHHHHcCcHHHHHHHHcCCCcccCCCEEEecCHH
Confidence 4799999999999999999997 9999999988754210 123
Q ss_pred HHHHHHHHHHHh-cCcEEEeCceEEEEEEcCCeEE-EEEeec---------CCCceEEEEcCEEEEeecCCCCCCCCCcc
Q 011787 256 EIRKQFQRSLEK-QKMKFMLKTKVVGVDLSGDGVK-LTLEPA---------AGGEKTILEADVVLVSAGRTPFTAGLGLD 324 (477)
Q Consensus 256 ~~~~~~~~~l~~-~gv~~~~~~~v~~i~~~~~~~~-v~~~~~---------~~~~~~~i~~D~vi~a~G~~p~~~~l~~~ 324 (477)
++...+.+.+.+ .|++++++++|+++..+++++. +.+... ..++...+++|.||+|+|..++...+..+
T Consensus 120 ~~~~~l~~~~~~~~gv~i~~~~~V~~i~~~~~~v~gv~~~~~~~~~~~~~g~~g~~~~i~ad~VV~AtG~~s~~~~~~~~ 199 (284)
T 1rp0_A 120 LFTSTIMSKLLARPNVKLFNAVAAEDLIVKGNRVGGVVTNWALVAQNHHTQSCMDPNVMEAKIVVSSCGHDGPFGATGVK 199 (284)
T ss_dssp HHHHHHHHHHHTSTTEEEEETEEEEEEEEETTEEEEEEEEEHHHHTCTTTSSCCCCEEEEEEEEEECCCSSSTTTTHHHH
T ss_pred HHHHHHHHHHHhcCCCEEEcCcEEEEEEecCCeEEEEEEeccccccccCccccCceEEEECCEEEECCCCchHHHHHHHH
Confidence 444455666655 6999999999999987776653 444310 11234689999999999988876432111
Q ss_pred cc---c--eeecCCCCeecCC-------CCCCCCCCeEEecccCC----CC---CchhHHHHHHHHHHHHHcCC
Q 011787 325 KI---G--VETDKMGRIPVNE-------RFATNIPGVYAIGDVIP----GP---MLAHKAEEDGVACVEFLAGK 379 (477)
Q Consensus 325 ~~---g--l~~~~~g~i~vd~-------~l~t~~~~vya~GD~~~----~~---~~~~~A~~~g~~aa~~i~~~ 379 (477)
.. + +.+....++.+|. ..+++.|++|++||++. .| +.+..+..+|+.+|.+|..+
T Consensus 200 ~~~~~g~~~~v~~~~g~~~~~~~~~~v~~~~~~~p~i~a~G~~~~~~~g~~~~gp~~~~~~~sG~~~a~~i~~~ 273 (284)
T 1rp0_A 200 RLKSIGMIDHVPGMKALDMNTAEDAIVRLTREVVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAGQLALKA 273 (284)
T ss_dssp HHHHTTSSSCCCCCEEECHHHHHHHHHHHCEEEETTEEECTHHHHHHHTCEECCSCCHHHHHHHHHHHHHHHHH
T ss_pred HhhhccCCCCcCCcCCchhhhhhHHHhhccccccCCEEEEeeehhhhcCCCCcChHHHHHHHhHHHHHHHHHHH
Confidence 10 1 1111112233332 33567899999999872 22 24667889999999999753
No 105
>1kf6_A Fumarate reductase flavoprotein; respiration, fumarate reductace, succinate dehydrogenase, CO quinol, quinone, oxidoreductase; HET: FAD HQO CE1 1PE; 2.70A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1kfy_A* 1l0v_A* 2b76_A* 3cir_A* 3p4p_A* 3p4q_A* 3p4r_A* 3p4s_A*
Probab=99.28 E-value=7.6e-12 Score=128.72 Aligned_cols=36 Identities=36% Similarity=0.478 Sum_probs=33.1
Q ss_pred CCcEEEECCChHHHHHHHHHHHCC--CeEEEEecCCCC
Q 011787 43 ENDVVVIGGGPGGYVAAIKAAQLG--LKTTCIEKRGAL 78 (477)
Q Consensus 43 ~~dvvIIGgG~AGl~aA~~l~~~g--~~V~lie~~~~~ 78 (477)
++||||||||+||++||+.|++.| .+|+||||....
T Consensus 5 ~~DVvIVG~G~AGl~aAl~la~~G~~~~V~vlEk~~~~ 42 (602)
T 1kf6_A 5 QADLAIVGAGGAGLRAAIAAAQANPNAKIALISKVYPM 42 (602)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHHCTTCCEEEEESSCGG
T ss_pred cCCEEEECCCHHHHHHHHHHHhcCCCCcEEEEeCCCCC
Confidence 479999999999999999999999 999999997644
No 106
>3v76_A Flavoprotein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: FDA; 2.51A {Sinorhizobium meliloti}
Probab=99.23 E-value=5.1e-11 Score=117.00 Aligned_cols=57 Identities=16% Similarity=0.345 Sum_probs=47.3
Q ss_pred HHHHHHHHHHHHhcCcEEEeCceEEEEEEcCCeEEEEEeecCCCceEEEEcCEEEEeecCCCC
Q 011787 255 GEIRKQFQRSLEKQKMKFMLKTKVVGVDLSGDGVKLTLEPAAGGEKTILEADVVLVSAGRTPF 317 (477)
Q Consensus 255 ~~~~~~~~~~l~~~gv~~~~~~~v~~i~~~~~~~~v~~~~~~~~~~~~i~~D~vi~a~G~~p~ 317 (477)
.++.+.+.+.+++.|++++++++|+++..+++++.+.+. ++ ++.+|.||+|+|..+.
T Consensus 132 ~~l~~~L~~~l~~~Gv~i~~~~~V~~i~~~~~~~~V~~~-----~g-~i~ad~VIlAtG~~S~ 188 (417)
T 3v76_A 132 KDIIRMLMAEMKEAGVQLRLETSIGEVERTASGFRVTTS-----AG-TVDAASLVVASGGKSI 188 (417)
T ss_dssp HHHHHHHHHHHHHHTCEEECSCCEEEEEEETTEEEEEET-----TE-EEEESEEEECCCCSSC
T ss_pred HHHHHHHHHHHHHCCCEEEECCEEEEEEEeCCEEEEEEC-----Cc-EEEeeEEEECCCCccC
Confidence 456677888888899999999999999888887777653 44 8999999999998763
No 107
>3cp8_A TRNA uridine 5-carboxymethylaminomethyl modification enzyme GIDA; rossmann fold, FAD-binding domain, dinucleotide-binding motif; HET: FAD; 3.20A {Chlorobium tepidum}
Probab=99.17 E-value=1.2e-11 Score=125.96 Aligned_cols=171 Identities=19% Similarity=0.243 Sum_probs=101.3
Q ss_pred CCCCcEEEECCChHHHHHHHHHHHCCCeEEEEecCC-CCCceeeccCccCchhhhhhhHHHHHHHh-------hhhhCCc
Q 011787 41 SDENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRG-ALGGTCLNVGCIPSKALLHSSHMYHEAMH-------SFASHGV 112 (477)
Q Consensus 41 ~~~~dvvIIGgG~AGl~aA~~l~~~g~~V~lie~~~-~~GG~~~~~~~~p~~~l~~~~~~~~~~~~-------~~~~~g~ 112 (477)
..++||+|||||+||++||..|++.|.+|+|+|+.. .+|+ .+|.|+............... .....++
T Consensus 19 ~~~yDVIVIGgG~AGl~AAlaLAr~G~kVlLIEk~~~~iG~----~~c~ps~gGia~~~lv~el~al~g~~~~~~d~~gi 94 (641)
T 3cp8_A 19 SHMYDVIVVGAGHAGCEAALAVARGGLHCLLITSDLSAVAR----MSCNPAIGGVAKGQITREIDALGGEMGKAIDATGI 94 (641)
T ss_dssp -CCEEEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTTC----CSSCSEEECHHHHHHHHHHHHHTCSHHHHHHHHEE
T ss_pred cCcCCEEEECccHHHHHHHHHHHHCCCcEEEEEecccccCC----CccccchhhhhHHHHHHHHHhcccHHHHHHHhcCC
Confidence 346999999999999999999999999999999964 4554 345554322221122211110 0011111
Q ss_pred ccccc-------------ccChHHHHHHHHHHHHHHHHHHHHHhhh-CCeEEEEeEEEEe--cCCEEE-EEecCCceEEE
Q 011787 113 KFSSV-------------EVDLPAMMAQKDKAVSNLTRGIEGLFKK-NKVTYVKGYGKFI--SPSEVS-VDTIEGGNTVV 175 (477)
Q Consensus 113 ~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~v~~~~~~~~~~--~~~~~~-v~~~~g~~~~i 175 (477)
.+... ..+-. .+...+.+.+++ .+++++.+.+..+ +.+.+. |.+.+| ..+
T Consensus 95 ~f~~l~~~kgpav~~~r~~~Dr~-----------~l~~~L~~~l~~~~GV~I~~~~V~~L~~d~g~V~GV~t~~G--~~i 161 (641)
T 3cp8_A 95 QFRMLNRSKGPAMHSPRAQADKT-----------QYSLYMRRIVEHEPNIDLLQDTVIGVSANSGKFSSVTVRSG--RAI 161 (641)
T ss_dssp EEEEECSSSCTTTCEEEEEECHH-----------HHHHHHHHHHHTCTTEEEEECCEEEEEEETTEEEEEEETTS--CEE
T ss_pred chhhcccccCccccchhhhcCHH-----------HHHHHHHHHHHhCCCCEEEeeEEEEEEecCCEEEEEEECCC--cEE
Confidence 11100 01111 122333445555 4899988877664 355555 777777 689
Q ss_pred EecEEEEccCCCCCCCCCCccCCceEecchhhhcccCCCCeeEEEcccHHHHHHHHHHHHcCCcEEEEE
Q 011787 176 KGKNIIIATGSDVKSLPGITIDEKRIVSSTGALALNEVPKKLVVIGAGYIGLEMGSVWARLGSEVTVVE 244 (477)
Q Consensus 176 ~~d~lvlAtG~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~v~IiG~G~~g~e~a~~l~~~g~~Vtli~ 244 (477)
.+|.||+|||+.+......+ ..-+. +.+++ | +.++++++..|.+.|.+|..+.
T Consensus 162 ~Ad~VVLATG~~s~~~i~~G---~~~~~----------~g~~v--G-~~~a~~la~~L~~~G~kv~~l~ 214 (641)
T 3cp8_A 162 QAKAAILACGTFLNGLIHIG---MDHFP----------GGRST--A-EPPVEGLTESLASLGFSFGRLK 214 (641)
T ss_dssp EEEEEEECCTTCBTCEEEET---TEEEE----------CSSST--T-SCCBCSHHHHHHHTTCCEEEEE
T ss_pred EeCEEEECcCCCCCccceee---eeeec----------ccccc--C-CchhhhhHHHHHhCCceEEeec
Confidence 99999999999875322111 00000 11111 3 5677899999999999887653
No 108
>3gyx_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 3.20A {Desulfovibrio gigas}
Probab=99.16 E-value=1.6e-10 Score=119.64 Aligned_cols=38 Identities=26% Similarity=0.386 Sum_probs=33.8
Q ss_pred CCcEEEECCChHHHHHHHHHHHC------CCeEEEEecCCCCCc
Q 011787 43 ENDVVVIGGGPGGYVAAIKAAQL------GLKTTCIEKRGALGG 80 (477)
Q Consensus 43 ~~dvvIIGgG~AGl~aA~~l~~~------g~~V~lie~~~~~GG 80 (477)
++||||||||+||++||++|++. |.+|+||||....++
T Consensus 22 ~~DVvVVG~G~AGL~AAl~aa~~~~~~~pG~~V~vleK~~~~~s 65 (662)
T 3gyx_A 22 SVDLLMVGGGMGNCGAAFEAVRWADKYAPEAKILLVDKASLERS 65 (662)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHHHHHHCTTCCEEEECSSCTTTC
T ss_pred EcCEEEECCCHHHHHHHHHHHhhccccCCCCcEEEEEecCCCCC
Confidence 58999999999999999999997 999999999654433
No 109
>3dme_A Conserved exported protein; structural genomics, PSI-2, PROT structure initiative, northeast structural genomics consort NESG; HET: FAD TLA; 1.70A {Bordetella pertussis}
Probab=99.13 E-value=8.9e-10 Score=106.66 Aligned_cols=60 Identities=18% Similarity=0.340 Sum_probs=47.9
Q ss_pred CHHHHHHHHHHHHhcCcEEEeCceEEEEEEcCCe-EEEEEeecCCCceEEEEcCEEEEeecCCC
Q 011787 254 DGEIRKQFQRSLEKQKMKFMLKTKVVGVDLSGDG-VKLTLEPAAGGEKTILEADVVLVSAGRTP 316 (477)
Q Consensus 254 ~~~~~~~~~~~l~~~gv~~~~~~~v~~i~~~~~~-~~v~~~~~~~~~~~~i~~D~vi~a~G~~p 316 (477)
+..+...+.+.+++.|++++++++|+++..++++ +.+.+. +++..++.+|.||+|+|...
T Consensus 149 ~~~~~~~l~~~~~~~Gv~i~~~~~v~~i~~~~~~~~~v~~~---~g~~~~~~a~~VV~A~G~~s 209 (369)
T 3dme_A 149 SHALMLAYQGDAESDGAQLVFHTPLIAGRVRPEGGFELDFG---GAEPMTLSCRVLINAAGLHA 209 (369)
T ss_dssp HHHHHHHHHHHHHHTTCEEECSCCEEEEEECTTSSEEEEEC---TTSCEEEEEEEEEECCGGGH
T ss_pred HHHHHHHHHHHHHHCCCEEECCCEEEEEEEcCCceEEEEEC---CCceeEEEeCEEEECCCcch
Confidence 3567788888899999999999999999887665 666553 23336899999999999764
No 110
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=99.08 E-value=4.9e-10 Score=101.12 Aligned_cols=119 Identities=18% Similarity=0.206 Sum_probs=73.5
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCeEEEEecCCCCCceeeccCccCchhhhhhhHHHHHHHhhhh-hCCccccccccCh
Q 011787 43 ENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFA-SHGVKFSSVEVDL 121 (477)
Q Consensus 43 ~~dvvIIGgG~AGl~aA~~l~~~g~~V~lie~~~~~GG~~~~~~~~p~~~l~~~~~~~~~~~~~~~-~~g~~~~~~~~~~ 121 (477)
++||+|||||++|+.+|..|++.|.+|+|||+.....|.+ |.|...-......... +. ..+ .+
T Consensus 3 ~~dVvVVGgG~aGl~aA~~la~~g~~v~lie~~~~~~G~~----~~~~~~~~~~~~~~~~----~~d~~g-------~~- 66 (232)
T 2cul_A 3 AYQVLIVGAGFSGAETAFWLAQKGVRVGLLTQSLDAVMMP----FLPPKPPFPPGSLLER----AYDPKD-------ER- 66 (232)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTTCC----SSCCCSCCCTTCHHHH----HCCTTC-------CC-
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCCEEEEecCCCcCCcc----cCccccccchhhHHhh----hccCCC-------CC-
Confidence 5899999999999999999999999999999974333322 2221100001111111 10 000 00
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhC-CeEEEEeEEEEec--CCE-EEEEecCCceEEEEecEEEEccCCCCC
Q 011787 122 PAMMAQKDKAVSNLTRGIEGLFKKN-KVTYVKGYGKFIS--PSE-VSVDTIEGGNTVVKGKNIIIATGSDVK 189 (477)
Q Consensus 122 ~~~~~~~~~~~~~~~~~~~~~~~~~-~v~~~~~~~~~~~--~~~-~~v~~~~g~~~~i~~d~lvlAtG~~~~ 189 (477)
...+...+.+.+++. +++++...+..+. .+. ..|.+.+| .++.+|+||+|+|....
T Consensus 67 ----------~~~~~~~l~~~~~~~~gv~i~~~~v~~i~~~~~~v~~v~~~~g--~~i~a~~VV~A~G~~s~ 126 (232)
T 2cul_A 67 ----------VWAFHARAKYLLEGLRPLHLFQATATGLLLEGNRVVGVRTWEG--PPARGEKVVLAVGSFLG 126 (232)
T ss_dssp ----------HHHHHHHHHHHHHTCTTEEEEECCEEEEEEETTEEEEEEETTS--CCEECSEEEECCTTCSS
T ss_pred ----------HHHHHHHHHHHHHcCCCcEEEEeEEEEEEEeCCEEEEEEECCC--CEEECCEEEECCCCChh
Confidence 112334445556665 8998876665543 344 35666777 57999999999998654
No 111
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=99.03 E-value=1.2e-09 Score=94.31 Aligned_cols=108 Identities=28% Similarity=0.319 Sum_probs=70.3
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCeEEEEecCCCCCceeeccCccCchhhhhhhHHHHHHHhhhhhCCccccccccChH
Q 011787 43 ENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSVEVDLP 122 (477)
Q Consensus 43 ~~dvvIIGgG~AGl~aA~~l~~~g~~V~lie~~~~~GG~~~~~~~~p~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 122 (477)
++|++|||||++|+.+|..|++.|.+|+|+|+.+..-..+...... .+++ .....
T Consensus 1 ~~~vvIIGgG~~Gl~~A~~l~~~g~~v~lie~~~~~~~~~~~~~~~---------------------~~~~---~~~~~- 55 (180)
T 2ywl_A 1 MWDVIVVGGGPSGLSAALFLARAGLKVLVLDGGRSKVKGVSRVPNY---------------------PGLL---DEPSG- 55 (180)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEEECSCCTTTTCSCCCCS---------------------TTCT---TCCCH-
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCcEEEEeCCCCcccCchhhhcc---------------------CCCc---CCCCH-
Confidence 3799999999999999999999999999999965221000000000 0000 00111
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhCCeEEEEeEEEEec--CCEEEEEecCCceEEEEecEEEEccCCCC
Q 011787 123 AMMAQKDKAVSNLTRGIEGLFKKNKVTYVKGYGKFIS--PSEVSVDTIEGGNTVVKGKNIIIATGSDV 188 (477)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~--~~~~~v~~~~g~~~~i~~d~lvlAtG~~~ 188 (477)
..+...+.+.+++.+++++.+++..++ .+.+.+.+.+| ++.+|.||+|+|..|
T Consensus 56 ----------~~~~~~l~~~~~~~gv~v~~~~v~~i~~~~~~~~v~~~~g---~i~ad~vI~A~G~~~ 110 (180)
T 2ywl_A 56 ----------EELLRRLEAHARRYGAEVRPGVVKGVRDMGGVFEVETEEG---VEKAERLLLCTHKDP 110 (180)
T ss_dssp ----------HHHHHHHHHHHHHTTCEEEECCCCEEEECSSSEEEECSSC---EEEEEEEEECCTTCC
T ss_pred ----------HHHHHHHHHHHHHcCCEEEeCEEEEEEEcCCEEEEEECCC---EEEECEEEECCCCCC
Confidence 122333445666778998887554443 34466777666 789999999999987
No 112
>1y56_B Sarcosine oxidase; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=99.02 E-value=8.9e-09 Score=100.24 Aligned_cols=57 Identities=16% Similarity=0.214 Sum_probs=46.2
Q ss_pred CHHHHHHHHHHHHhcCcEEEeCceEEEEEEcCCeEE-EEEeecCCCceEEEEcCEEEEeecCCC
Q 011787 254 DGEIRKQFQRSLEKQKMKFMLKTKVVGVDLSGDGVK-LTLEPAAGGEKTILEADVVLVSAGRTP 316 (477)
Q Consensus 254 ~~~~~~~~~~~l~~~gv~~~~~~~v~~i~~~~~~~~-v~~~~~~~~~~~~i~~D~vi~a~G~~p 316 (477)
+..+...+.+.+++.|++++++++|++++.+++++. +++. ++ ++.+|.||+|+|...
T Consensus 148 ~~~l~~~l~~~~~~~Gv~i~~~~~v~~i~~~~~~v~gv~~~-----~g-~i~a~~VV~A~G~~s 205 (382)
T 1y56_B 148 PFEATTAFAVKAKEYGAKLLEYTEVKGFLIENNEIKGVKTN-----KG-IIKTGIVVNATNAWA 205 (382)
T ss_dssp HHHHHHHHHHHHHHTTCEEECSCCEEEEEESSSBEEEEEET-----TE-EEECSEEEECCGGGH
T ss_pred HHHHHHHHHHHHHHCCCEEECCceEEEEEEECCEEEEEEEC-----Cc-EEECCEEEECcchhH
Confidence 346677788888899999999999999988777766 5543 34 799999999999764
No 113
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=99.00 E-value=3.2e-09 Score=103.69 Aligned_cols=60 Identities=17% Similarity=0.142 Sum_probs=44.6
Q ss_pred HHHHHHHHHHHhcCcEEEeCceEEEEEEcCCeEEEEEeecCCCceEEEEcCEEEEeecCCC
Q 011787 256 EIRKQFQRSLEKQKMKFMLKTKVVGVDLSGDGVKLTLEPAAGGEKTILEADVVLVSAGRTP 316 (477)
Q Consensus 256 ~~~~~~~~~l~~~gv~~~~~~~v~~i~~~~~~~~v~~~~~~~~~~~~i~~D~vi~a~G~~p 316 (477)
.+...+.+..++.|++++++++++.+..+++.+...... .+++..++.+|+||.|.|..+
T Consensus 103 ~~~~~L~~~a~~~G~~~~~~~~v~~~~~~~~~~~~v~~~-~~~~~~~~~a~~vIgAdG~~S 162 (397)
T 3oz2_A 103 KFDKHLAALAAKAGADVWVKSPALGVIKENGKVAGAKIR-HNNEIVDVRAKMVIAADGFES 162 (397)
T ss_dssp HHHHHHHHHHHHHTCEEESSCCEEEEEEETTEEEEEEEE-ETTEEEEEEEEEEEECCCTTC
T ss_pred HHHHHHHHHHHhcCcEEeeeeeeeeeeeccceeeeeeec-ccccceEEEEeEEEeCCcccc
Confidence 445566677778899999999999998887776533321 234556799999999999654
No 114
>1rp0_A ARA6, thiazole biosynthetic enzyme; protein ligand complex, biosynthetic protein; HET: AHZ HTO; 1.60A {Arabidopsis thaliana} SCOP: c.3.1.6
Probab=98.97 E-value=5.5e-09 Score=97.31 Aligned_cols=132 Identities=22% Similarity=0.262 Sum_probs=77.4
Q ss_pred CCCcEEEECCChHHHHHHHHHHHC-CCeEEEEecCCCCCceeeccCccCchhhhhhhHHHHHHHhhhhhCCcccccc---
Q 011787 42 DENDVVVIGGGPGGYVAAIKAAQL-GLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSV--- 117 (477)
Q Consensus 42 ~~~dvvIIGgG~AGl~aA~~l~~~-g~~V~lie~~~~~GG~~~~~~~~p~~~l~~~~~~~~~~~~~~~~~g~~~~~~--- 117 (477)
.++||+|||||++|+++|..|++. |.+|+|+|+.+.+||.+...++.....+.... ....+..+|+++...
T Consensus 38 ~~~dVvIIGgG~aGl~aA~~la~~~G~~V~viEk~~~~gg~~~~~~~~~~~~~~~~~-----~~~~l~~~G~~~~~~~~~ 112 (284)
T 1rp0_A 38 AETDVVVVGAGSAGLSAAYEISKNPNVQVAIIEQSVSPGGGAWLGGQLFSAMIVRKP-----AHLFLDEIGVAYDEQDTY 112 (284)
T ss_dssp TEEEEEEECCSHHHHHHHHHHHTSTTSCEEEEESSSSCCTTTTCCSTTCCCEEEETT-----THHHHHHHTCCCEECSSE
T ss_pred cccCEEEECccHHHHHHHHHHHHcCCCeEEEEECCCCCCCceecCCcchHHHHcCcH-----HHHHHHHcCCCcccCCCE
Confidence 358999999999999999999997 99999999988887754443333222111111 011223344443210
Q ss_pred c--cChHHHHHHHHHHHHHHHHHHHHHh-hhCCeEEEEeE-EEEe--cCCEE-EEEec---------C---CceEEEEec
Q 011787 118 E--VDLPAMMAQKDKAVSNLTRGIEGLF-KKNKVTYVKGY-GKFI--SPSEV-SVDTI---------E---GGNTVVKGK 178 (477)
Q Consensus 118 ~--~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~~-~~~~--~~~~~-~v~~~---------~---g~~~~i~~d 178 (477)
. .+.. .+...+.+.+ +..+++++.+. +..+ +.+.+ .+... + ++...+++|
T Consensus 113 ~~~~~~~-----------~~~~~l~~~~~~~~gv~i~~~~~V~~i~~~~~~v~gv~~~~~~~~~~~~~g~~g~~~~i~ad 181 (284)
T 1rp0_A 113 VVVKHAA-----------LFTSTIMSKLLARPNVKLFNAVAAEDLIVKGNRVGGVVTNWALVAQNHHTQSCMDPNVMEAK 181 (284)
T ss_dssp EEESCHH-----------HHHHHHHHHHHTSTTEEEEETEEEEEEEEETTEEEEEEEEEHHHHTCTTTSSCCCCEEEEEE
T ss_pred EEecCHH-----------HHHHHHHHHHHhcCCCEEEcCcEEEEEEecCCeEEEEEEeccccccccCccccCceEEEECC
Confidence 0 0111 1112222333 34689998873 4444 33433 23221 1 234679999
Q ss_pred EEEEccCCCCC
Q 011787 179 NIIIATGSDVK 189 (477)
Q Consensus 179 ~lvlAtG~~~~ 189 (477)
.||+|+|..+.
T Consensus 182 ~VV~AtG~~s~ 192 (284)
T 1rp0_A 182 IVVSSCGHDGP 192 (284)
T ss_dssp EEEECCCSSST
T ss_pred EEEECCCCchH
Confidence 99999998663
No 115
>1y0p_A Fumarate reductase flavoprotein subunit; flavocytochrome, mesaconate, oxidoreductase; HET: HEM FAD; 1.50A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1qjd_A* 2b7s_A* 1jry_A* 2b7r_A* 1ksu_A* 1jrz_A* 1jrx_A* 1m64_A* 1p2h_A* 1p2e_A* 1kss_A* 1e39_A* 1q9i_A* 1lj1_A*
Probab=98.96 E-value=1.6e-09 Score=111.23 Aligned_cols=41 Identities=44% Similarity=0.656 Sum_probs=37.6
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCeEEEEecCCCCCceee
Q 011787 43 ENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGALGGTCL 83 (477)
Q Consensus 43 ~~dvvIIGgG~AGl~aA~~l~~~g~~V~lie~~~~~GG~~~ 83 (477)
.+||+|||||+||++||..|++.|.+|+|+||.+.+||...
T Consensus 126 ~~DVvVVGaG~aGl~aA~~la~~G~~V~vlEk~~~~gg~s~ 166 (571)
T 1y0p_A 126 TVDVVVVGSGGAGFSAAISATDSGAKVILIEKEPVIGGNAK 166 (571)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTTGG
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCcEEEEeCCCCCCCchh
Confidence 58999999999999999999999999999999888887543
No 116
>3cgv_A Geranylgeranyl reductase related protein; NP_393992.1, geranylgeranyl bacteriochlorophyll reductase- like FIXC homolog; HET: MSE FAD UNL; 1.60A {Thermoplasma acidophilum dsm 1728} PDB: 3oz2_A*
Probab=98.96 E-value=6e-09 Score=101.99 Aligned_cols=59 Identities=17% Similarity=0.208 Sum_probs=47.7
Q ss_pred HHHHHHHHHHHhcCcEEEeCceEEEEEEcCCeEE-EEEeecCCCceEEEEcCEEEEeecCCC
Q 011787 256 EIRKQFQRSLEKQKMKFMLKTKVVGVDLSGDGVK-LTLEPAAGGEKTILEADVVLVSAGRTP 316 (477)
Q Consensus 256 ~~~~~~~~~l~~~gv~~~~~~~v~~i~~~~~~~~-v~~~~~~~~~~~~i~~D~vi~a~G~~p 316 (477)
.+...+.+.+++.|++++.+++|+++..+++.+. +++.+ .+++.++.+|.||.|+|..+
T Consensus 103 ~l~~~L~~~~~~~gv~i~~~~~v~~i~~~~~~v~gv~~~~--~~~~~~~~a~~vV~A~G~~s 162 (397)
T 3cgv_A 103 KFDKHLAALAAKAGADVWVKSPALGVIKENGKVAGAKIRH--NNEIVDVRAKMVIAADGFES 162 (397)
T ss_dssp HHHHHHHHHHHHHTCEEESSCCEEEEEEETTEEEEEEEEE--TTEEEEEEEEEEEECCCTTC
T ss_pred HHHHHHHHHHHhCCCEEEECCEEEEEEEeCCEEEEEEEEE--CCeEEEEEcCEEEECCCcch
Confidence 4556677777888999999999999988888776 66643 23567899999999999765
No 117
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=98.94 E-value=1.5e-08 Score=106.29 Aligned_cols=59 Identities=12% Similarity=0.166 Sum_probs=48.5
Q ss_pred CHHHHHHHHHHHHhcCcEEEeCceEEEEEEcCCeEEEEEeecCCCceEEEEcCEEEEeecCCCC
Q 011787 254 DGEIRKQFQRSLEKQKMKFMLKTKVVGVDLSGDGVKLTLEPAAGGEKTILEADVVLVSAGRTPF 317 (477)
Q Consensus 254 ~~~~~~~~~~~l~~~gv~~~~~~~v~~i~~~~~~~~v~~~~~~~~~~~~i~~D~vi~a~G~~p~ 317 (477)
+..+...+.+.+++.|++++++++|+++..+++++.+++. ++.++.+|.||+|+|....
T Consensus 416 p~~l~~aL~~~a~~~Gv~i~~~t~V~~l~~~~~~v~V~t~-----~G~~i~Ad~VVlAtG~~s~ 474 (676)
T 3ps9_A 416 PAELTRNVLELAQQQGLQIYYQYQLQNFSRKDDCWLLNFA-----GDQQATHSVVVLANGHQIS 474 (676)
T ss_dssp HHHHHHHHHHHHHHTTCEEEESCCEEEEEEETTEEEEEET-----TSCEEEESEEEECCGGGGG
T ss_pred HHHHHHHHHHHHHhCCCEEEeCCeeeEEEEeCCeEEEEEC-----CCCEEECCEEEECCCcchh
Confidence 3567778888888999999999999999988888766653 4457999999999997643
No 118
>3nix_A Flavoprotein/dehydrogenase; structural genomics, PSI-2, NES protein structure initiative, northeast structural genomics consortium; HET: FAD; 2.60A {Cytophaga hutchinsonii}
Probab=98.93 E-value=1.3e-08 Score=100.46 Aligned_cols=60 Identities=18% Similarity=0.286 Sum_probs=46.2
Q ss_pred HHHHHHHHHHHhcCcEEEeCceEEEEEEcCCeEEEEEeecCCCceEEEEcCEEEEeecCCC
Q 011787 256 EIRKQFQRSLEKQKMKFMLKTKVVGVDLSGDGVKLTLEPAAGGEKTILEADVVLVSAGRTP 316 (477)
Q Consensus 256 ~~~~~~~~~l~~~gv~~~~~~~v~~i~~~~~~~~v~~~~~~~~~~~~i~~D~vi~a~G~~p 316 (477)
.+...+.+.+++.|++++.+++|++++.++++..+.+.. .++...++.+|.||.|+|..+
T Consensus 107 ~~~~~L~~~a~~~gv~i~~~~~v~~i~~~~~~~~v~v~~-~~g~~~~~~a~~vV~A~G~~s 166 (421)
T 3nix_A 107 NFDKTLADEAARQGVDVEYEVGVTDIKFFGTDSVTTIED-INGNKREIEARFIIDASGYGR 166 (421)
T ss_dssp HHHHHHHHHHHHHTCEEECSEEEEEEEEETTEEEEEEEE-TTSCEEEEEEEEEEECCGGGC
T ss_pred HHHHHHHHHHHhCCCEEEcCCEEEEEEEeCCEEEEEEEc-CCCCEEEEEcCEEEECCCCch
Confidence 556667777778899999999999998887776665543 223334799999999999765
No 119
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=98.93 E-value=1.1e-08 Score=103.51 Aligned_cols=55 Identities=13% Similarity=0.242 Sum_probs=45.9
Q ss_pred HHHHHHHHHHHhcCcEEEeCceEEEEEEcCCeEE-EEEeecCCCceEEEEcCEEEEeecCC
Q 011787 256 EIRKQFQRSLEKQKMKFMLKTKVVGVDLSGDGVK-LTLEPAAGGEKTILEADVVLVSAGRT 315 (477)
Q Consensus 256 ~~~~~~~~~l~~~gv~~~~~~~v~~i~~~~~~~~-v~~~~~~~~~~~~i~~D~vi~a~G~~ 315 (477)
.+.+.+.+.+++.|++|+++++|++|..+++++. |++. +++++.+|.||.+++..
T Consensus 222 ~l~~aL~~~~~~~Gg~I~~~~~V~~I~~~~~~~~gV~~~-----~g~~~~ad~VV~~a~~~ 277 (501)
T 4dgk_A 222 ALVQGMIKLFQDLGGEVVLNARVSHMETTGNKIEAVHLE-----DGRRFLTQAVASNADVV 277 (501)
T ss_dssp HHHHHHHHHHHHTTCEEECSCCEEEEEEETTEEEEEEET-----TSCEEECSCEEECCC--
T ss_pred chHHHHHHHHHHhCCceeeecceeEEEeeCCeEEEEEec-----CCcEEEcCEEEECCCHH
Confidence 5677788889999999999999999999888876 6665 67899999999987654
No 120
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=98.92 E-value=2.8e-08 Score=104.25 Aligned_cols=58 Identities=9% Similarity=0.147 Sum_probs=47.5
Q ss_pred CHHHHHHHHHHHHhcCcEEEeCceEEEEEEcCCeEEEEEeecCCCceE-EEEcCEEEEeecCCC
Q 011787 254 DGEIRKQFQRSLEKQKMKFMLKTKVVGVDLSGDGVKLTLEPAAGGEKT-ILEADVVLVSAGRTP 316 (477)
Q Consensus 254 ~~~~~~~~~~~l~~~gv~~~~~~~v~~i~~~~~~~~v~~~~~~~~~~~-~i~~D~vi~a~G~~p 316 (477)
+..+...+.+.+++.|++++++++|+++..+++++.+.+. ++. ++.+|.||+|+|...
T Consensus 411 p~~l~~aL~~~a~~~Gv~i~~~t~V~~l~~~~~~v~V~t~-----~G~~~i~Ad~VVlAtG~~s 469 (689)
T 3pvc_A 411 PSDLTHALMMLAQQNGMTCHYQHELQRLKRIDSQWQLTFG-----QSQAAKHHATVILATGHRL 469 (689)
T ss_dssp HHHHHHHHHHHHHHTTCEEEESCCEEEEEECSSSEEEEEC------CCCCEEESEEEECCGGGT
T ss_pred HHHHHHHHHHHHHhCCCEEEeCCeEeEEEEeCCeEEEEeC-----CCcEEEECCEEEECCCcch
Confidence 3567778888888999999999999999988887766654 344 799999999999764
No 121
>2gf3_A MSOX, monomeric sarcosine oxidase; flavoprotein oxidase, inhibitor 2-furoic acid, oxidoreductas; HET: FAD; 1.30A {Bacillus SP} SCOP: c.3.1.2 d.16.1.3 PDB: 1el7_A* 1el8_A* 1el9_A* 1eli_A* 1l9e_A* 2a89_A* 2gb0_A* 1el5_A* 3qse_A* 3qsm_A* 3qss_A* 3bhk_A* 3bhf_A* 3m12_A* 3m13_A* 3m0o_A* 1l9c_A* 1l9d_A* 1zov_A*
Probab=98.92 E-value=5.1e-08 Score=95.07 Aligned_cols=71 Identities=21% Similarity=0.246 Sum_probs=52.4
Q ss_pred cEEEEEeCCCcCCCCCHHHHHHHHHHHHhcCcEEEeCceEEEEEEcCCeEEEEEeecCCCceEEEEcCEEEEeecCCCC
Q 011787 239 EVTVVEFAADIVPSMDGEIRKQFQRSLEKQKMKFMLKTKVVGVDLSGDGVKLTLEPAAGGEKTILEADVVLVSAGRTPF 317 (477)
Q Consensus 239 ~Vtli~~~~~~~~~~~~~~~~~~~~~l~~~gv~~~~~~~v~~i~~~~~~~~v~~~~~~~~~~~~i~~D~vi~a~G~~p~ 317 (477)
...++...+..+. +..+...+.+.+++.|++++++++|++++.+++++.+++. ++ ++.+|.||+|+|..++
T Consensus 136 ~~~~~~~~~~~~~--~~~~~~~l~~~~~~~Gv~i~~~~~v~~i~~~~~~~~v~~~-----~g-~~~a~~vV~A~G~~~~ 206 (389)
T 2gf3_A 136 YNAIFEPNSGVLF--SENCIRAYRELAEARGAKVLTHTRVEDFDISPDSVKIETA-----NG-SYTADKLIVSMGAWNS 206 (389)
T ss_dssp EEEEEETTCEEEE--HHHHHHHHHHHHHHTTCEEECSCCEEEEEECSSCEEEEET-----TE-EEEEEEEEECCGGGHH
T ss_pred ceEEEeCCCcEEe--HHHHHHHHHHHHHHCCCEEEcCcEEEEEEecCCeEEEEeC-----CC-EEEeCEEEEecCccHH
Confidence 4555554433221 3567788888899999999999999999887777666542 33 7999999999997643
No 122
>2i0z_A NAD(FAD)-utilizing dehydrogenases; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: FAD; 1.84A {Bacillus cereus} SCOP: c.3.1.8 e.74.1.1
Probab=98.91 E-value=6.6e-09 Score=103.38 Aligned_cols=137 Identities=25% Similarity=0.343 Sum_probs=79.2
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCeEEEEecCCCCCce--------eeccCc-cCchhh---------hhhh---HHHH
Q 011787 43 ENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGALGGT--------CLNVGC-IPSKAL---------LHSS---HMYH 101 (477)
Q Consensus 43 ~~dvvIIGgG~AGl~aA~~l~~~g~~V~lie~~~~~GG~--------~~~~~~-~p~~~l---------~~~~---~~~~ 101 (477)
++||+|||||+||+++|..|++.|.+|+|+|+.+.+|+. |..... .+...+ .... ....
T Consensus 26 ~~dVvIIGgG~aGl~aA~~la~~G~~V~llEk~~~~g~~~~~sg~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 105 (447)
T 2i0z_A 26 HYDVIVIGGGPSGLMAAIGAAEEGANVLLLDKGNKLGRKLAISGGGRCNVTNRLPLDEIVKHIPGNGRFLYSAFSIFNNE 105 (447)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHHHTGGGTCCCEECSCHHHHHHTCTBTGGGGHHHHHHSCHH
T ss_pred CCCEEEECCcHHHHHHHHHHHHCCCCEEEEECCCCCCceeEEeCCCceeccCcccHHHHHHHhccChHHHHHHHHhcCHH
Confidence 489999999999999999999999999999998877643 211110 000000 0000 0001
Q ss_pred HHHhhhhhCCcccccc----ccChHHHHHHHHHHHHHHHHHHHHHhhhCCeEEEEeE-EEEe--cCCE-EEEEecCCceE
Q 011787 102 EAMHSFASHGVKFSSV----EVDLPAMMAQKDKAVSNLTRGIEGLFKKNKVTYVKGY-GKFI--SPSE-VSVDTIEGGNT 173 (477)
Q Consensus 102 ~~~~~~~~~g~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~--~~~~-~~v~~~~g~~~ 173 (477)
....++...|+.+... .++... ....+...+...+++.+++++.++ +..+ +.+. +.|.+.+| .
T Consensus 106 ~~~~~~~~~G~~~~~~~~g~~~p~~~-------~~~~l~~~L~~~~~~~GV~i~~~~~V~~i~~~~~~v~~V~~~~G--~ 176 (447)
T 2i0z_A 106 DIITFFENLGVKLKEEDHGRMFPVSN-------KAQSVVDALLTRLKDLGVKIRTNTPVETIEYENGQTKAVILQTG--E 176 (447)
T ss_dssp HHHHHHHHTTCCEEECGGGEEEETTC-------CHHHHHHHHHHHHHHTTCEEECSCCEEEEEEETTEEEEEEETTC--C
T ss_pred HHHHHHHhcCCceEEeeCCEEECCCC-------CHHHHHHHHHHHHHHCCCEEEeCcEEEEEEecCCcEEEEEECCC--C
Confidence 1223334444432110 000000 012233344455566789988763 4433 3444 66777777 4
Q ss_pred EEEecEEEEccCCCC
Q 011787 174 VVKGKNIIIATGSDV 188 (477)
Q Consensus 174 ~i~~d~lvlAtG~~~ 188 (477)
.+.+|.||+|||...
T Consensus 177 ~i~Ad~VVlAtGg~s 191 (447)
T 2i0z_A 177 VLETNHVVIAVGGKS 191 (447)
T ss_dssp EEECSCEEECCCCSS
T ss_pred EEECCEEEECCCCCc
Confidence 699999999999876
No 123
>3dje_A Fructosyl amine: oxygen oxidoreductase; fructosyl-amino acid, amadoriase, deglycation, fructosamine oxidase; HET: MSE FAD FSA EPE; 1.60A {Aspergillus fumigatus} PDB: 3djd_A*
Probab=98.90 E-value=9.6e-09 Score=102.02 Aligned_cols=57 Identities=21% Similarity=0.294 Sum_probs=47.8
Q ss_pred HHHHHHHHHHHHhcCcEEEeCc---eEEEEEEcCCeEE-EEEeecCCCceEEEEcCEEEEeecCCC
Q 011787 255 GEIRKQFQRSLEKQKMKFMLKT---KVVGVDLSGDGVK-LTLEPAAGGEKTILEADVVLVSAGRTP 316 (477)
Q Consensus 255 ~~~~~~~~~~l~~~gv~~~~~~---~v~~i~~~~~~~~-v~~~~~~~~~~~~i~~D~vi~a~G~~p 316 (477)
..+...+.+.+++.|+++++++ +|+++..+++++. +++. +++++.+|.||+|+|...
T Consensus 161 ~~~~~~L~~~a~~~Gv~i~~~t~~~~V~~i~~~~~~v~gV~t~-----~G~~i~Ad~VV~AtG~~s 221 (438)
T 3dje_A 161 RNALVAAAREAQRMGVKFVTGTPQGRVVTLIFENNDVKGAVTA-----DGKIWRAERTFLCAGASA 221 (438)
T ss_dssp HHHHHHHHHHHHHTTCEEEESTTTTCEEEEEEETTEEEEEEET-----TTEEEECSEEEECCGGGG
T ss_pred HHHHHHHHHHHHhcCCEEEeCCcCceEEEEEecCCeEEEEEEC-----CCCEEECCEEEECCCCCh
Confidence 4677788888899999999999 9999988877776 6654 556899999999999654
No 124
>2oln_A NIKD protein; flavoprotein, rossmann fold, oxidoreductase; HET: FAD; 1.15A {Streptomyces tendae} PDB: 2olo_A* 3hzl_A* 2q6u_A*
Probab=98.89 E-value=4.6e-08 Score=95.75 Aligned_cols=55 Identities=15% Similarity=0.130 Sum_probs=44.1
Q ss_pred HHHHHHHHHHHHhcCcEEEeCceEEEEEEcCCeEEEEEeecCCCceEEEEcCEEEEeecCC
Q 011787 255 GEIRKQFQRSLEKQKMKFMLKTKVVGVDLSGDGVKLTLEPAAGGEKTILEADVVLVSAGRT 315 (477)
Q Consensus 255 ~~~~~~~~~~l~~~gv~~~~~~~v~~i~~~~~~~~v~~~~~~~~~~~~i~~D~vi~a~G~~ 315 (477)
..+...+.+.+++.|++++++++|++++.+++++.+... + .++.+|.||+|+|..
T Consensus 153 ~~~~~~l~~~a~~~Gv~i~~~~~V~~i~~~~~~v~v~t~-----~-g~i~a~~VV~A~G~~ 207 (397)
T 2oln_A 153 RGTLAALFTLAQAAGATLRAGETVTELVPDADGVSVTTD-----R-GTYRAGKVVLACGPY 207 (397)
T ss_dssp HHHHHHHHHHHHHTTCEEEESCCEEEEEEETTEEEEEES-----S-CEEEEEEEEECCGGG
T ss_pred HHHHHHHHHHHHHcCCEEECCCEEEEEEEcCCeEEEEEC-----C-CEEEcCEEEEcCCcC
Confidence 356667778888899999999999999887777665432 2 379999999999965
No 125
>1qo8_A Flavocytochrome C3 fumarate reductase; oxidoreductase; HET: HEM FAD; 2.15A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1
Probab=98.89 E-value=2.3e-09 Score=109.91 Aligned_cols=41 Identities=27% Similarity=0.556 Sum_probs=37.2
Q ss_pred CCCcEEEECCChHHHHHHHHHHHCCCeEEEEecCCCCCcee
Q 011787 42 DENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGALGGTC 82 (477)
Q Consensus 42 ~~~dvvIIGgG~AGl~aA~~l~~~g~~V~lie~~~~~GG~~ 82 (477)
.++||+|||||+||++||+.|++.|.+|+||||.+.+||..
T Consensus 120 ~~~DVvVVG~G~aGl~aA~~la~~G~~V~vlEk~~~~gg~s 160 (566)
T 1qo8_A 120 ETTQVLVVGAGSAGFNASLAAKKAGANVILVDKAPFSGGNS 160 (566)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHHTCCEEEECSSSSSCTTG
T ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCcEEEEeCCCCCCCcc
Confidence 45899999999999999999999999999999988887643
No 126
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=98.88 E-value=6.2e-09 Score=102.36 Aligned_cols=56 Identities=13% Similarity=0.271 Sum_probs=45.5
Q ss_pred HHHHHHHHHHHhcCcEEEeCceEEEEEEcCCeEEEEEeecCCCceEEEEcCEEEEeecCCCCC
Q 011787 256 EIRKQFQRSLEKQKMKFMLKTKVVGVDLSGDGVKLTLEPAAGGEKTILEADVVLVSAGRTPFT 318 (477)
Q Consensus 256 ~~~~~~~~~l~~~gv~~~~~~~v~~i~~~~~~~~v~~~~~~~~~~~~i~~D~vi~a~G~~p~~ 318 (477)
.+.+.+.+.+++ ++++++++|++++.+++++.+++. +++++.+|+||.|.|.....
T Consensus 128 ~l~~~L~~~~~~--~~i~~~~~v~~i~~~~~~v~v~~~-----~g~~~~a~~vV~AdG~~S~v 183 (407)
T 3rp8_A 128 ELQREMLDYWGR--DSVQFGKRVTRCEEDADGVTVWFT-----DGSSASGDLLIAADGSHSAL 183 (407)
T ss_dssp HHHHHHHHHHCG--GGEEESCCEEEEEEETTEEEEEET-----TSCEEEESEEEECCCTTCSS
T ss_pred HHHHHHHHhCCc--CEEEECCEEEEEEecCCcEEEEEc-----CCCEEeeCEEEECCCcChHH
Confidence 556666666665 889999999999998888888775 55689999999999987654
No 127
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A*
Probab=98.86 E-value=7.7e-09 Score=100.63 Aligned_cols=136 Identities=17% Similarity=0.117 Sum_probs=74.1
Q ss_pred CCCcEEEECCChHHHHHHHHHHHCCCeEEEEecCCCCCceeeccCccCc-hhhhhhhHHHHHHHhhhhhCCcccccc---
Q 011787 42 DENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPS-KALLHSSHMYHEAMHSFASHGVKFSSV--- 117 (477)
Q Consensus 42 ~~~dvvIIGgG~AGl~aA~~l~~~g~~V~lie~~~~~GG~~~~~~~~p~-~~l~~~~~~~~~~~~~~~~~g~~~~~~--- 117 (477)
..+||+|||||++|+++|..|++.|.+|+|+|+....++........|. ..++......... ...+......
T Consensus 10 ~~~dVvIVGaG~aGl~~A~~L~~~G~~v~viE~~~~~~~~~~~~~l~~~~~~~l~~~g~~~~~----~~~~~~~~~~~~~ 85 (379)
T 3alj_A 10 KTRRAEVAGGGFAGLTAAIALKQNGWDVRLHEKSSELRAFGAGIYLWHNGLRVLEGLGALDDV----LQGSHTPPTYETW 85 (379)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSCCCCSSEEEEEHHHHHHHHHTTCHHHH----HTTCBCCSCEEEE
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCCEEEEecCCCCCCCCceEEeCccHHHHHHHcCCHHHH----HhhCCCccceEEE
Confidence 4589999999999999999999999999999997766431111000110 0111100011111 1111100000
Q ss_pred -------ccChH---HHHHHHHHHHHHHHHHHHHHhhhCCeEEEEeE-EEEecCCEEEEEecCCceEEEEecEEEEccCC
Q 011787 118 -------EVDLP---AMMAQKDKAVSNLTRGIEGLFKKNKVTYVKGY-GKFISPSEVSVDTIEGGNTVVKGKNIIIATGS 186 (477)
Q Consensus 118 -------~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~~~~~~~v~~~~g~~~~i~~d~lvlAtG~ 186 (477)
.++.. ...-. ...+...+.+.+.+.+++++.++ +..++.+. .|.+.+| .++.+|.||.|+|.
T Consensus 86 ~~g~~~~~~~~~~~~~~~~~----r~~l~~~L~~~~~~~gv~i~~~~~v~~i~~~~-~v~~~~g--~~~~ad~vV~AdG~ 158 (379)
T 3alj_A 86 MHNKSVSKETFNGLPWRIMT----RSHLHDALVNRARALGVDISVNSEAVAADPVG-RLTLQTG--EVLEADLIVGADGV 158 (379)
T ss_dssp ETTEEEEEECGGGCCEEEEE----HHHHHHHHHHHHHHTTCEEESSCCEEEEETTT-EEEETTS--CEEECSEEEECCCT
T ss_pred eCCceeeeccCCCCceEEEC----HHHHHHHHHHHHHhcCCEEEeCCEEEEEEeCC-EEEECCC--CEEEcCEEEECCCc
Confidence 00000 00000 01223334445555688888764 44444333 6777777 57999999999998
Q ss_pred CC
Q 011787 187 DV 188 (477)
Q Consensus 187 ~~ 188 (477)
..
T Consensus 159 ~s 160 (379)
T 3alj_A 159 GS 160 (379)
T ss_dssp TC
T ss_pred cH
Confidence 76
No 128
>2bry_A NEDD9 interacting protein with calponin homology and LIM domains; transport, coiled coil, cytoskeleton, FAD, flavoprotein, metal-binding, zinc; HET: FAD; 1.45A {Mus musculus} PDB: 2c4c_A* 2bra_A*
Probab=98.86 E-value=6.9e-09 Score=104.49 Aligned_cols=125 Identities=21% Similarity=0.219 Sum_probs=75.7
Q ss_pred CCCCcEEEECCChHHHHHHHHHHHCCCeEEEEecCCCCCceeeccCccCchhhhhhhHHHHHHHhhhhhCCcc-----c-
Q 011787 41 SDENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVK-----F- 114 (477)
Q Consensus 41 ~~~~dvvIIGgG~AGl~aA~~l~~~g~~V~lie~~~~~GG~~~~~~~~p~~~l~~~~~~~~~~~~~~~~~g~~-----~- 114 (477)
...+||+|||||++|+++|..|++.|.+|+|||+.+.+|+. ......|.. ...+...|+. +
T Consensus 90 ~~~~dVvIVGgG~aGl~aA~~La~~G~~V~liEk~~~~g~~-~~~~~~~~~------------~~~l~~~g~~~~~~~~~ 156 (497)
T 2bry_A 90 CTNTKCLVVGAGPCGLRAAVELALLGARVVLVEKRIKFSRH-NVLHLWPFT------------IHDLRALGAKKFYGRFC 156 (497)
T ss_dssp TTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCSSCCCC-CEEECCHHH------------HHHHHTTTHHHHCTTTT
T ss_pred cCCCCEEEECccHHHHHHHHHHHHCCCeEEEEEeccccCCC-CcccCChhH------------HHHHHHcCCcccccccc
Confidence 34689999999999999999999999999999998777653 211222210 0111111210 0
Q ss_pred -cc-cccChHHHHHHHHHHHHHHHHHHHHHhhhCCeEEEEe-EEEEecC-----CEEEEEe--c-CCceEEEEecEEEEc
Q 011787 115 -SS-VEVDLPAMMAQKDKAVSNLTRGIEGLFKKNKVTYVKG-YGKFISP-----SEVSVDT--I-EGGNTVVKGKNIIIA 183 (477)
Q Consensus 115 -~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-~~~~~~~-----~~~~v~~--~-~g~~~~i~~d~lvlA 183 (477)
.. ..++. ..+...+.+.+++.++++..+ .+..+.. ..+.|.+ . +|+..++.+|+||+|
T Consensus 157 ~~~~~~~~~-----------~~l~~~L~~~~~~~gv~v~~~~~v~~i~~~~~~~~~~~v~~~~~~~g~~~~i~ad~VV~A 225 (497)
T 2bry_A 157 TGTLDHISI-----------RQLQLLLLKVALLLGVEIHWGVKFTGLQPPPRKGSGWRAQLQPNPPAQLASYEFDVLISA 225 (497)
T ss_dssp CTTCCEEEH-----------HHHHHHHHHHHHHTTCEEEESCEEEEEECCCSTTCCBEEEEESCCCHHHHTCCBSEEEEC
T ss_pred ccccccCCH-----------HHHHHHHHHHHHhCCCEEEeCCEEEEEEEecCCCCEEEEEEEECCCCCEEEEEcCEEEEC
Confidence 00 00111 122333445556678998887 4544432 2345554 3 442346899999999
Q ss_pred cCCCCC
Q 011787 184 TGSDVK 189 (477)
Q Consensus 184 tG~~~~ 189 (477)
+|..+.
T Consensus 226 ~G~~S~ 231 (497)
T 2bry_A 226 AGGKFV 231 (497)
T ss_dssp CCTTCC
T ss_pred CCCCcc
Confidence 998874
No 129
>2uzz_A N-methyl-L-tryptophan oxidase; N-methyltryptophan oxidase (MTOX), oxidative demethylation of N-methyl-L-tryptophan, FAD, flavoenzyme; HET: FAD; 3.2A {Escherichia coli}
Probab=98.85 E-value=6.6e-08 Score=93.65 Aligned_cols=56 Identities=16% Similarity=0.188 Sum_probs=45.0
Q ss_pred HHHHHHHHHHHHhcCcEEEeCceEEEEEEcCCeEEEEEeecCCCceEEEEcCEEEEeecCCC
Q 011787 255 GEIRKQFQRSLEKQKMKFMLKTKVVGVDLSGDGVKLTLEPAAGGEKTILEADVVLVSAGRTP 316 (477)
Q Consensus 255 ~~~~~~~~~~l~~~gv~~~~~~~v~~i~~~~~~~~v~~~~~~~~~~~~i~~D~vi~a~G~~p 316 (477)
..+...+.+.+++.|++++++++|++++.+++++.+++. ++ ++.+|.||+|+|...
T Consensus 149 ~~l~~~l~~~~~~~G~~i~~~~~V~~i~~~~~~~~v~~~-----~g-~~~a~~vV~a~G~~s 204 (372)
T 2uzz_A 149 ELAIKTWIQLAKEAGCAQLFNCPVTAIRHDDDGVTIETA-----DG-EYQAKKAIVCAGTWV 204 (372)
T ss_dssp HHHHHHHHHHHHHTTCEEECSCCEEEEEECSSSEEEEES-----SC-EEEEEEEEECCGGGG
T ss_pred HHHHHHHHHHHHHCCCEEEcCCEEEEEEEcCCEEEEEEC-----CC-eEEcCEEEEcCCccH
Confidence 366777888888899999999999999887777666543 33 599999999999654
No 130
>2gag_B Heterotetrameric sarcosine oxidase beta-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_B* 1x31_B* 1vrq_B* 3ad7_B* 3ad8_B* 3ad9_B* 3ada_B*
Probab=98.85 E-value=7.5e-08 Score=94.42 Aligned_cols=56 Identities=14% Similarity=0.233 Sum_probs=44.6
Q ss_pred HHHHHHHHHHHHhcCcEEEeCceEEEEEEcCCeE-EEEEeecCCCceEEEEcCEEEEeecCCC
Q 011787 255 GEIRKQFQRSLEKQKMKFMLKTKVVGVDLSGDGV-KLTLEPAAGGEKTILEADVVLVSAGRTP 316 (477)
Q Consensus 255 ~~~~~~~~~~l~~~gv~~~~~~~v~~i~~~~~~~-~v~~~~~~~~~~~~i~~D~vi~a~G~~p 316 (477)
..+...+.+.+++.|++++++++|+++..+++++ .+++. ++ ++.+|.||+|+|...
T Consensus 174 ~~~~~~l~~~~~~~g~~i~~~~~v~~i~~~~~~~~~v~~~-----~g-~~~a~~vV~a~G~~s 230 (405)
T 2gag_B 174 DHVAWAFARKANEMGVDIIQNCEVTGFIKDGEKVTGVKTT-----RG-TIHAGKVALAGAGHS 230 (405)
T ss_dssp HHHHHHHHHHHHHTTCEEECSCCEEEEEESSSBEEEEEET-----TC-CEEEEEEEECCGGGH
T ss_pred HHHHHHHHHHHHHCCCEEEcCCeEEEEEEeCCEEEEEEeC-----Cc-eEECCEEEECCchhH
Confidence 3677778888899999999999999998776654 34432 33 799999999999765
No 131
>3jsk_A Cypbp37 protein; octameric thiazole synthase, biosynthetic protein; HET: AHZ; 2.70A {Neurospora crassa}
Probab=98.84 E-value=6.1e-09 Score=98.14 Aligned_cols=49 Identities=35% Similarity=0.449 Sum_probs=41.3
Q ss_pred CCcEEEECCChHHHHHHHHHHHC--CCeEEEEecCCCCCceeeccCccCch
Q 011787 43 ENDVVVIGGGPGGYVAAIKAAQL--GLKTTCIEKRGALGGTCLNVGCIPSK 91 (477)
Q Consensus 43 ~~dvvIIGgG~AGl~aA~~l~~~--g~~V~lie~~~~~GG~~~~~~~~p~~ 91 (477)
.+||+|||||++|+++|+.|++. |++|+|+|+...+||.+...++.+..
T Consensus 79 ~~DVvIVGgG~AGL~aA~~La~~~~G~~V~LiEk~~~~GGg~~~~g~~~~~ 129 (344)
T 3jsk_A 79 ETDIVIVGAGSCGLSAAYVLSTLRPDLRITIVEAGVAPGGGAWLGGQLFSA 129 (344)
T ss_dssp BCSEEEECCSHHHHHHHHHHHHHCTTSCEEEEESSSSCCTTTTCCBTTCCC
T ss_pred cCCEEEECccHHHHHHHHHHHhcCCCCEEEEEeCCCccCCccccCCccchh
Confidence 58999999999999999999997 99999999988888665555554443
No 132
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A*
Probab=98.83 E-value=5.2e-08 Score=94.76 Aligned_cols=58 Identities=16% Similarity=0.126 Sum_probs=47.0
Q ss_pred CHHHHHHHHHHHHhcCcEEEeCceEEEEEEcCCeEEEEEeecCCCceEEEEcCEEEEeecCCCC
Q 011787 254 DGEIRKQFQRSLEKQKMKFMLKTKVVGVDLSGDGVKLTLEPAAGGEKTILEADVVLVSAGRTPF 317 (477)
Q Consensus 254 ~~~~~~~~~~~l~~~gv~~~~~~~v~~i~~~~~~~~v~~~~~~~~~~~~i~~D~vi~a~G~~p~ 317 (477)
+..+...+.+.+++.|++++++++|+++..+++++.+.+. ++ ++.+|.||+|+|....
T Consensus 163 ~~~~~~~l~~~~~~~g~~i~~~~~v~~i~~~~~~~~v~~~-----~g-~~~a~~vV~A~G~~s~ 220 (382)
T 1ryi_A 163 PYFVCKAYVKAAKMLGAEIFEHTPVLHVERDGEALFIKTP-----SG-DVWANHVVVASGVWSG 220 (382)
T ss_dssp HHHHHHHHHHHHHHTTCEEETTCCCCEEECSSSSEEEEET-----TE-EEEEEEEEECCGGGTH
T ss_pred HHHHHHHHHHHHHHCCCEEEcCCcEEEEEEECCEEEEEcC-----Cc-eEEcCEEEECCChhHH
Confidence 3567788888889999999999999999877777655542 34 7999999999997643
No 133
>4at0_A 3-ketosteroid-delta4-5alpha-dehydrogenase; oxidoreductase, dehydogenase, steroid catabolism; HET: FAD; 1.60A {Rhodococcus jostii} PDB: 4at2_A*
Probab=98.82 E-value=2.6e-08 Score=100.79 Aligned_cols=42 Identities=38% Similarity=0.532 Sum_probs=38.4
Q ss_pred CCCcEEEECCChHHHHHHHHHHHCCCeEEEEecCCCCCceee
Q 011787 42 DENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGALGGTCL 83 (477)
Q Consensus 42 ~~~dvvIIGgG~AGl~aA~~l~~~g~~V~lie~~~~~GG~~~ 83 (477)
.++||||||||+||++||+.|++.|++|+||||....||...
T Consensus 40 ~~~DVvVVGaG~AGl~AA~~aa~~G~~V~vlEk~~~~GG~s~ 81 (510)
T 4at0_A 40 YEADVVVAGYGIAGVAASIEAARAGADVLVLERTSGWGGATA 81 (510)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTTGG
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCcEEEEeCCCCCCCcch
Confidence 468999999999999999999999999999999988887543
No 134
>3i3l_A Alkylhalidase CMLS; flavin-dependent halogenase, chloramphenicol biosynthesis, halogenation reaction, structural genomics; HET: FAD; 2.20A {Streptomyces venezuelae}
Probab=98.82 E-value=2e-08 Score=102.88 Aligned_cols=38 Identities=34% Similarity=0.564 Sum_probs=34.4
Q ss_pred CCCCcEEEECCChHHHHHHHHHHHCCCeEEEEecCCCC
Q 011787 41 SDENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGAL 78 (477)
Q Consensus 41 ~~~~dvvIIGgG~AGl~aA~~l~~~g~~V~lie~~~~~ 78 (477)
|..+||+|||||+||+++|..|++.|.+|+|||+....
T Consensus 21 M~~~DVvIVGgG~AGl~aA~~Lar~G~~V~LiEr~~~~ 58 (591)
T 3i3l_A 21 MTRSKVAIIGGGPAGSVAGLTLHKLGHDVTIYERSAFP 58 (591)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCSS
T ss_pred CCCCCEEEECcCHHHHHHHHHHHcCCCCEEEEcCCCCC
Confidence 44699999999999999999999999999999997543
No 135
>2bry_A NEDD9 interacting protein with calponin homology and LIM domains; transport, coiled coil, cytoskeleton, FAD, flavoprotein, metal-binding, zinc; HET: FAD; 1.45A {Mus musculus} PDB: 2c4c_A* 2bra_A*
Probab=98.81 E-value=6e-10 Score=112.26 Aligned_cols=107 Identities=22% Similarity=0.292 Sum_probs=81.8
Q ss_pred CCCeeEEEcccHHHHHHHHHHHHcCCcEEEEEeCCCcCCC-----CC----------------------------HHHHH
Q 011787 213 VPKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIVPS-----MD----------------------------GEIRK 259 (477)
Q Consensus 213 ~~~~v~IiG~G~~g~e~a~~l~~~g~~Vtli~~~~~~~~~-----~~----------------------------~~~~~ 259 (477)
...+|+|||||+.|+.+|..|++.|.+|+++++.+.+... .+ .++.+
T Consensus 91 ~~~dVvIVGgG~aGl~aA~~La~~G~~V~liEk~~~~g~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~l~~ 170 (497)
T 2bry_A 91 TNTKCLVVGAGPCGLRAAVELALLGARVVLVEKRIKFSRHNVLHLWPFTIHDLRALGAKKFYGRFCTGTLDHISIRQLQL 170 (497)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCSSCCCCCEEECCHHHHHHHHTTTHHHHCTTTTCTTCCEEEHHHHHH
T ss_pred CCCCEEEECccHHHHHHHHHHHHCCCeEEEEEeccccCCCCcccCChhHHHHHHHcCCccccccccccccccCCHHHHHH
Confidence 3678999999999999999999999999999988754210 11 45566
Q ss_pred HHHHHHHhcCcEEEeCceEEEEEEc---CCeEEEEEeecCCCceEEEEcCEEEEeecCCCCCC
Q 011787 260 QFQRSLEKQKMKFMLKTKVVGVDLS---GDGVKLTLEPAAGGEKTILEADVVLVSAGRTPFTA 319 (477)
Q Consensus 260 ~~~~~l~~~gv~~~~~~~v~~i~~~---~~~~~v~~~~~~~~~~~~i~~D~vi~a~G~~p~~~ 319 (477)
.+.+.+++.|++++++++|+++..+ ++.+.+++....++...++.+|.||.|+|..+...
T Consensus 171 ~L~~~~~~~gv~v~~~~~v~~i~~~~~~~~~~~v~~~~~~~g~~~~i~ad~VV~A~G~~S~~r 233 (497)
T 2bry_A 171 LLLKVALLLGVEIHWGVKFTGLQPPPRKGSGWRAQLQPNPPAQLASYEFDVLISAAGGKFVPE 233 (497)
T ss_dssp HHHHHHHHTTCEEEESCEEEEEECCCSTTCCBEEEEESCCCHHHHTCCBSEEEECCCTTCCCT
T ss_pred HHHHHHHhCCCEEEeCCEEEEEEEecCCCCEEEEEEEECCCCCEEEEEcCEEEECCCCCcccc
Confidence 7778888889999999999999864 34556665321012125689999999999998764
No 136
>3e1t_A Halogenase; flavoprotein; HET: FAD; 2.05A {Chondromyces crocatus}
Probab=98.80 E-value=2.3e-08 Score=101.26 Aligned_cols=61 Identities=13% Similarity=0.245 Sum_probs=46.5
Q ss_pred HHHHHHHHHHHhcCcEEEeCceEEEEEEcCCeEE-EEEeecCCCceEEEEcCEEEEeecCCCC
Q 011787 256 EIRKQFQRSLEKQKMKFMLKTKVVGVDLSGDGVK-LTLEPAAGGEKTILEADVVLVSAGRTPF 317 (477)
Q Consensus 256 ~~~~~~~~~l~~~gv~~~~~~~v~~i~~~~~~~~-v~~~~~~~~~~~~i~~D~vi~a~G~~p~ 317 (477)
.+.+.+.+.+++.|++++.+++|+++..+++.+. +.+.. .++...++.+|.||.|+|....
T Consensus 112 ~l~~~L~~~a~~~Gv~i~~~~~V~~v~~~~~~v~gv~~~~-~dG~~~~i~ad~VI~AdG~~S~ 173 (512)
T 3e1t_A 112 RFDDMLLRNSERKGVDVRERHEVIDVLFEGERAVGVRYRN-TEGVELMAHARFIVDASGNRTR 173 (512)
T ss_dssp HHHHHHHHHHHHTTCEEESSCEEEEEEEETTEEEEEEEEC-SSSCEEEEEEEEEEECCCTTCS
T ss_pred HHHHHHHHHHHhCCCEEEcCCEEEEEEEECCEEEEEEEEe-CCCCEEEEEcCEEEECCCcchH
Confidence 5566777778889999999999999998877654 55442 2233358999999999997653
No 137
>3nyc_A D-arginine dehydrogenase; FAD, imino-arginine, oxidoreductas; HET: FAD IAR; 1.06A {Pseudomonas aeruginosa} PDB: 3nye_A* 3nyf_A* 3sm8_A*
Probab=98.77 E-value=1.5e-07 Score=91.40 Aligned_cols=56 Identities=9% Similarity=0.192 Sum_probs=46.0
Q ss_pred HHHHHHHHHHHHhcCcEEEeCceEEEEEEcCCeEEEEEeecCCCceEEEEcCEEEEeecCCC
Q 011787 255 GEIRKQFQRSLEKQKMKFMLKTKVVGVDLSGDGVKLTLEPAAGGEKTILEADVVLVSAGRTP 316 (477)
Q Consensus 255 ~~~~~~~~~~l~~~gv~~~~~~~v~~i~~~~~~~~v~~~~~~~~~~~~i~~D~vi~a~G~~p 316 (477)
..+...+.+.+++.|++++++++|+++..+++++.+++. ++ ++.+|.||+|+|...
T Consensus 154 ~~~~~~l~~~a~~~Gv~i~~~~~V~~i~~~~~~~~V~t~-----~g-~i~a~~VV~A~G~~s 209 (381)
T 3nyc_A 154 DALHQGYLRGIRRNQGQVLCNHEALEIRRVDGAWEVRCD-----AG-SYRAAVLVNAAGAWC 209 (381)
T ss_dssp HHHHHHHHHHHHHTTCEEESSCCCCEEEEETTEEEEECS-----SE-EEEESEEEECCGGGH
T ss_pred HHHHHHHHHHHHHCCCEEEcCCEEEEEEEeCCeEEEEeC-----CC-EEEcCEEEECCChhH
Confidence 467777888888999999999999999988877666543 34 899999999999643
No 138
>3pl8_A Pyranose 2-oxidase; substrate complex, H167A mutant, homotetramer, GMC oxidoredu PHBH fold, rossmann domain, oxidoreductase; HET: FAD MES G3F; 1.35A {Trametes ochracea} PDB: 2igo_A* 3lsm_A* 2ign_A* 3k4c_A* 1tt0_A* 2igk_A* 3k4b_A* 3lsk_A* 3bg6_A* 3lsh_A* 3lsi_A* 2igm_A* 3k4j_A* 3k4m_A* 3bg7_A* 3k4k_A* 3k4l_A* 3bly_A* 1tzl_A* 3fdy_A* ...
Probab=98.75 E-value=6.9e-10 Score=114.52 Aligned_cols=64 Identities=17% Similarity=0.189 Sum_probs=46.6
Q ss_pred HhcCcEEEeCceEEEEEEcCC--eE-EEEEeecCCCceEEEEcCEEEEeecCCCCCCCCCcccccee
Q 011787 266 EKQKMKFMLKTKVVGVDLSGD--GV-KLTLEPAAGGEKTILEADVVLVSAGRTPFTAGLGLDKIGVE 329 (477)
Q Consensus 266 ~~~gv~~~~~~~v~~i~~~~~--~~-~v~~~~~~~~~~~~i~~D~vi~a~G~~p~~~~l~~~~~gl~ 329 (477)
++.|+++++++.|++|..+++ ++ .+++.+..++...++.+|.||+|+|..|+...+.+...|..
T Consensus 271 ~~~nv~v~~~~~V~~i~~~~~~~~v~GV~~~~~~~g~~~~i~A~~VIlaaG~~~s~~lL~~sgiG~~ 337 (623)
T 3pl8_A 271 PEERFNLFPAVACERVVRNALNSEIESLHIHDLISGDRFEIKADVYVLTAGAVHNTQLLVNSGFGQL 337 (623)
T ss_dssp EEEEEEEECSEEEEEEEECTTSSCEEEEEEEETTTCCEEEECEEEEEECSCTTHHHHHHHTTTSSCC
T ss_pred cCCCEEEEeCCEEEEEEEECCCCEEEEEEEEEcCCCcEEEEECCEEEEcCCCcCCHHHHHhcCCCcc
Confidence 445899999999999987643 33 36665544556678999999999999998876444444433
No 139
>3ka7_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: FAD; 1.80A {Methanosarcina mazei}
Probab=98.75 E-value=1.3e-07 Score=93.30 Aligned_cols=56 Identities=14% Similarity=0.217 Sum_probs=45.5
Q ss_pred HHHHHHHHHHHHhcCcEEEeCceEEEEEEcCCeEE-EEEeecCCCceEEEEcCEEEEeecCCC
Q 011787 255 GEIRKQFQRSLEKQKMKFMLKTKVVGVDLSGDGVK-LTLEPAAGGEKTILEADVVLVSAGRTP 316 (477)
Q Consensus 255 ~~~~~~~~~~l~~~gv~~~~~~~v~~i~~~~~~~~-v~~~~~~~~~~~~i~~D~vi~a~G~~p 316 (477)
..+.+.+.+.+++.|++++++++|++|..+++++. +++ +++++.+|.||+|++...
T Consensus 196 ~~l~~~l~~~~~~~G~~i~~~~~V~~i~~~~~~~~gv~~------~g~~~~ad~VV~a~~~~~ 252 (425)
T 3ka7_A 196 KGIIDALETVISANGGKIHTGQEVSKILIENGKAAGIIA------DDRIHDADLVISNLGHAA 252 (425)
T ss_dssp HHHHHHHHHHHHHTTCEEECSCCEEEEEEETTEEEEEEE------TTEEEECSEEEECSCHHH
T ss_pred HHHHHHHHHHHHHcCCEEEECCceeEEEEECCEEEEEEE------CCEEEECCEEEECCCHHH
Confidence 35667778888999999999999999998887765 443 356899999999998543
No 140
>1d4d_A Flavocytochrome C fumarate reductase; oxidoreductase; HET: HEM FAD; 2.50A {Shewanella oneidensis} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1d4e_A* 1d4c_A*
Probab=98.74 E-value=1.7e-08 Score=103.43 Aligned_cols=41 Identities=39% Similarity=0.614 Sum_probs=37.4
Q ss_pred CCCcEEEECCChHHHHHHHHHHHCCCeEEEEecCCCCCcee
Q 011787 42 DENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGALGGTC 82 (477)
Q Consensus 42 ~~~dvvIIGgG~AGl~aA~~l~~~g~~V~lie~~~~~GG~~ 82 (477)
..+||+|||+|+||+++|..|++.|.+|+|+|+.+.+||..
T Consensus 125 ~~~~v~viG~G~aG~~aa~~~~~~g~~v~~~e~~~~~~~~~ 165 (572)
T 1d4d_A 125 ETTDVVIIGSGGAGLAAAVSARDAGAKVILLEKEPIPGGNT 165 (572)
T ss_dssp EECSEEEECCSHHHHHHHHHHHSSSCCEEEECSSSSSCTTG
T ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCcEEEEecCCCCCcch
Confidence 35799999999999999999999999999999988887654
No 141
>1pj5_A N,N-dimethylglycine oxidase; channelling, FAD binding, folate binding, amine oxidase, oxidoreductase; HET: FAD; 1.61A {Arthrobacter globiformis} SCOP: b.44.2.1 c.3.1.2 d.16.1.5 d.250.1.1 PDB: 1pj6_A* 1pj7_A* 3gsi_A*
Probab=98.74 E-value=1.3e-07 Score=101.46 Aligned_cols=56 Identities=21% Similarity=0.327 Sum_probs=45.0
Q ss_pred CHHHHHHHHHHHHhcCcEEEeCceEEEEEEcCCeEE-EEEeecCCCceEEEEcCEEEEeecCC
Q 011787 254 DGEIRKQFQRSLEKQKMKFMLKTKVVGVDLSGDGVK-LTLEPAAGGEKTILEADVVLVSAGRT 315 (477)
Q Consensus 254 ~~~~~~~~~~~l~~~gv~~~~~~~v~~i~~~~~~~~-v~~~~~~~~~~~~i~~D~vi~a~G~~ 315 (477)
+..+...+.+.+++.|++++++++|+++..+++++. +.+. ++ ++.+|.||+|+|..
T Consensus 150 p~~l~~~L~~~a~~~Gv~i~~~t~V~~i~~~~~~v~~V~t~-----~G-~i~Ad~VV~AaG~~ 206 (830)
T 1pj5_A 150 AARAVQLLIKRTESAGVTYRGSTTVTGIEQSGGRVTGVQTA-----DG-VIPADIVVSCAGFW 206 (830)
T ss_dssp HHHHHHHHHHHHHHTTCEEECSCCEEEEEEETTEEEEEEET-----TE-EEECSEEEECCGGG
T ss_pred HHHHHHHHHHHHHHcCCEEECCceEEEEEEeCCEEEEEEEC-----Cc-EEECCEEEECCccc
Confidence 346778888889999999999999999988777654 4432 33 79999999999954
No 142
>3c96_A Flavin-containing monooxygenase; FAD, oxidoreductase, PF01266, NESG, PAR240, structural genomics, PSI-2; HET: FAD; 1.90A {Pseudomonas aeruginosa PAO1} SCOP: c.3.1.2 d.16.1.2 PDB: 2rgj_A*
Probab=98.74 E-value=1.5e-07 Score=92.48 Aligned_cols=62 Identities=18% Similarity=0.156 Sum_probs=45.1
Q ss_pred HHHHHHHHHHHh-cC-cEEEeCceEEEEEEcCCeEEEEEeecCCCceEEEEcCEEEEeecCCCCC
Q 011787 256 EIRKQFQRSLEK-QK-MKFMLKTKVVGVDLSGDGVKLTLEPAAGGEKTILEADVVLVSAGRTPFT 318 (477)
Q Consensus 256 ~~~~~~~~~l~~-~g-v~~~~~~~v~~i~~~~~~~~v~~~~~~~~~~~~i~~D~vi~a~G~~p~~ 318 (477)
.+.+.+.+.+++ .| ++++++++|++++. ++++.+++.+..++...++.+|+||.|.|..+..
T Consensus 108 ~l~~~L~~~~~~~~g~~~v~~~~~v~~i~~-~~~v~v~~~~~~~g~~~~~~ad~vV~AdG~~S~v 171 (410)
T 3c96_A 108 ELQMILLAAVRERLGQQAVRTGLGVERIEE-RDGRVLIGARDGHGKPQALGADVLVGADGIHSAV 171 (410)
T ss_dssp HHHHHHHHHHHHHHCTTSEEESEEEEEEEE-ETTEEEEEEEETTSCEEEEEESEEEECCCTTCHH
T ss_pred HHHHHHHHHHHhhCCCcEEEECCEEEEEec-CCccEEEEecCCCCCceEEecCEEEECCCccchh
Confidence 455666666665 35 68999999999987 6677777753222333689999999999987654
No 143
>3da1_A Glycerol-3-phosphate dehydrogenase; NESG BHR167 Q9KDW6 X-RAY, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.70A {Bacillus halodurans}
Probab=98.73 E-value=2.4e-07 Score=94.60 Aligned_cols=63 Identities=13% Similarity=0.041 Sum_probs=50.5
Q ss_pred CHHHHHHHHHHHHhcCcEEEeCceEEEEEEcCCeEE-EEEeecCCCceEEEEcCEEEEeecCCC
Q 011787 254 DGEIRKQFQRSLEKQKMKFMLKTKVVGVDLSGDGVK-LTLEPAAGGEKTILEADVVLVSAGRTP 316 (477)
Q Consensus 254 ~~~~~~~~~~~l~~~gv~~~~~~~v~~i~~~~~~~~-v~~~~~~~~~~~~i~~D~vi~a~G~~p 316 (477)
+..+...+.+.+++.|++++++++|+++..+++++. +++.+..++++..+.+|.||.|+|...
T Consensus 169 ~~~l~~~L~~~a~~~G~~i~~~~~V~~l~~~~g~v~gV~~~d~~tg~~~~i~A~~VV~AaG~~s 232 (561)
T 3da1_A 169 DARLTLEIMKEAVARGAVALNYMKVESFIYDQGKVVGVVAKDRLTDTTHTIYAKKVVNAAGPWV 232 (561)
T ss_dssp HHHHHHHHHHHHHHTTCEEEESEEEEEEEEETTEEEEEEEEETTTCCEEEEEEEEEEECCGGGH
T ss_pred HHHHHHHHHHHHHHcCCEEEcCCEEEEEEEcCCeEEEEEEEEcCCCceEEEECCEEEECCCcch
Confidence 356777778888889999999999999998877754 666654455567899999999999643
No 144
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=98.71 E-value=9.4e-09 Score=95.14 Aligned_cols=40 Identities=25% Similarity=0.351 Sum_probs=38.0
Q ss_pred CcEEEECCChHHHHHHHHHHHCCCeEEEEecCCCCCceee
Q 011787 44 NDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGALGGTCL 83 (477)
Q Consensus 44 ~dvvIIGgG~AGl~aA~~l~~~g~~V~lie~~~~~GG~~~ 83 (477)
+||+||||||||++||..|++.|++|+|+||.+.+||.+.
T Consensus 3 ~dV~IIGaGpaGL~aA~~La~~G~~V~v~Ek~~~~GG~~~ 42 (336)
T 3kkj_A 3 VPIAIIGTGIAGLSAAQALTAAGHQVHLFDKSRGSGGRMS 42 (336)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCGGGC
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCCCccc
Confidence 7999999999999999999999999999999999999764
No 145
>2wdq_A Succinate dehydrogenase flavoprotein subunit; succinate dehydrogenase activity, cell inner membrane, trica acid cycle; HET: FAD HEM CBE; 2.40A {Escherichia coli} PDB: 1nen_A* 2acz_A* 1nek_A* 2wdr_A* 2wdv_A* 2wp9_A* 2ws3_A* 2wu2_A* 2wu5_A*
Probab=98.68 E-value=6.5e-08 Score=99.25 Aligned_cols=62 Identities=11% Similarity=0.074 Sum_probs=45.5
Q ss_pred HHHHHHHHHHHHhcCcEEEeCceEEEEEEc-CCeEE-EEEeecCCCceEEEEcCEEEEeecCCC
Q 011787 255 GEIRKQFQRSLEKQKMKFMLKTKVVGVDLS-GDGVK-LTLEPAAGGEKTILEADVVLVSAGRTP 316 (477)
Q Consensus 255 ~~~~~~~~~~l~~~gv~~~~~~~v~~i~~~-~~~~~-v~~~~~~~~~~~~i~~D~vi~a~G~~p 316 (477)
..+...+.+.+++.|+++++++.++++..+ ++++. +.+.+..++....+.++.||+|+|-..
T Consensus 143 ~~l~~~L~~~~~~~gv~i~~~~~v~~L~~~~~g~v~Gv~~~~~~~g~~~~i~A~~VVlAtGg~~ 206 (588)
T 2wdq_A 143 HALLHTLYQQNLKNHTTIFSEWYALDLVKNQDGAVVGCTALCIETGEVVYFKARATVLATGGAG 206 (588)
T ss_dssp HHHHHHHHHHHHHTTCEEEETEEEEEEEECTTSCEEEEEEEETTTCCEEEEEEEEEEECCCCCG
T ss_pred HHHHHHHHHHHHhCCCEEEeCcEEEEEEECCCCEEEEEEEEEcCCCeEEEEEcCEEEECCCCCc
Confidence 456677778888889999999999999875 55443 444432334445799999999999643
No 146
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=98.67 E-value=1.3e-07 Score=90.20 Aligned_cols=41 Identities=24% Similarity=0.342 Sum_probs=37.5
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCeEEEEecCCCCCceee
Q 011787 43 ENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGALGGTCL 83 (477)
Q Consensus 43 ~~dvvIIGgG~AGl~aA~~l~~~g~~V~lie~~~~~GG~~~ 83 (477)
++||+|||||++|+++|..|++.|.+|+|+||...+||.+.
T Consensus 2 ~~dV~IIGaG~~Gl~~A~~L~~~G~~V~vlE~~~~~gg~~~ 42 (336)
T 1yvv_A 2 TVPIAIIGTGIAGLSAAQALTAAGHQVHLFDKSRGSGGRMS 42 (336)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCGGGC
T ss_pred CceEEEECCcHHHHHHHHHHHHCCCcEEEEECCCCCcccce
Confidence 37999999999999999999999999999999888887654
No 147
>2x3n_A Probable FAD-dependent monooxygenase; oxidoreductase; HET: FAD; 1.75A {Pseudomonas aeruginosa}
Probab=98.66 E-value=1.1e-07 Score=93.12 Aligned_cols=36 Identities=25% Similarity=0.346 Sum_probs=33.5
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCeEEEEecCCCC
Q 011787 43 ENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGAL 78 (477)
Q Consensus 43 ~~dvvIIGgG~AGl~aA~~l~~~g~~V~lie~~~~~ 78 (477)
++||+|||||++|+++|..|++.|.+|+|+|+....
T Consensus 6 ~~dVvIVGaG~aGl~~A~~L~~~G~~V~viE~~~~~ 41 (399)
T 2x3n_A 6 HIDVLINGCGIGGAMLAYLLGRQGHRVVVVEQARRE 41 (399)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCCC
T ss_pred cCCEEEECcCHHHHHHHHHHHhCCCcEEEEeCCCCC
Confidence 589999999999999999999999999999997654
No 148
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=98.65 E-value=2.2e-07 Score=89.24 Aligned_cols=95 Identities=21% Similarity=0.293 Sum_probs=78.3
Q ss_pred CeeEEEcccHHHHHHHHHHHHcCCcEEEEEeCCCcC---------------------CCCC-----------HHHHHHHH
Q 011787 215 KKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIV---------------------PSMD-----------GEIRKQFQ 262 (477)
Q Consensus 215 ~~v~IiG~G~~g~e~a~~l~~~g~~Vtli~~~~~~~---------------------~~~~-----------~~~~~~~~ 262 (477)
.+|+|||+|+.|+.+|..|++.|.+|+++++.+.+. +.++ .++.+.+.
T Consensus 4 ~~vvIIG~G~aGl~~A~~l~~~g~~v~vie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 83 (357)
T 4a9w_A 4 VDVVVIGGGQSGLSAGYFLRRSGLSYVILDAEASPGGAWQHAWHSLHLFSPAGWSSIPGWPMPASQGPYPARAEVLAYLA 83 (357)
T ss_dssp EEEEEECCSHHHHHHHHHHHHSSCCEEEECCSSSSSGGGGGSCTTCBCSSCGGGSCCSSSCCCCCSSSSCBHHHHHHHHH
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCCCcccCCCCCcEecCchhhhhCCCCCCCCCccCCCCHHHHHHHHH
Confidence 369999999999999999999999999999886531 1110 57778888
Q ss_pred HHHHhcCcEEEeCceEEEEEEcCCeEE-EEEeecCCCceEEEEcCEEEEeecCC
Q 011787 263 RSLEKQKMKFMLKTKVVGVDLSGDGVK-LTLEPAAGGEKTILEADVVLVSAGRT 315 (477)
Q Consensus 263 ~~l~~~gv~~~~~~~v~~i~~~~~~~~-v~~~~~~~~~~~~i~~D~vi~a~G~~ 315 (477)
+.+++.|++++++++|++++.+++.+. +++. ++ ++.+|.||+|+|..
T Consensus 84 ~~~~~~~~~~~~~~~v~~i~~~~~~~~~v~~~-----~g-~~~~d~vV~AtG~~ 131 (357)
T 4a9w_A 84 QYEQKYALPVLRPIRVQRVSHFGERLRVVARD-----GR-QWLARAVISATGTW 131 (357)
T ss_dssp HHHHHTTCCEECSCCEEEEEEETTEEEEEETT-----SC-EEEEEEEEECCCSG
T ss_pred HHHHHcCCEEEcCCEEEEEEECCCcEEEEEeC-----CC-EEEeCEEEECCCCC
Confidence 888899999999999999998888766 6542 33 89999999999953
No 149
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=98.62 E-value=2.4e-08 Score=97.75 Aligned_cols=37 Identities=22% Similarity=0.420 Sum_probs=33.9
Q ss_pred CCCCcEEEECCChHHHHHHHHHHHCCCeEEEEecCCC
Q 011787 41 SDENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGA 77 (477)
Q Consensus 41 ~~~~dvvIIGgG~AGl~aA~~l~~~g~~V~lie~~~~ 77 (477)
+..+||+|||||++|+++|..|++.|.+|+|+|+.+.
T Consensus 3 ~~~~~V~IVGaG~aGl~~A~~L~~~G~~v~v~E~~~~ 39 (397)
T 2vou_A 3 PTTDRIAVVGGSISGLTAALMLRDAGVDVDVYERSPQ 39 (397)
T ss_dssp CCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred CCCCcEEEECCCHHHHHHHHHHHhCCCCEEEEecCCC
Confidence 3468999999999999999999999999999999765
No 150
>2gmh_A Electron transfer flavoprotein-ubiquinone oxidoreductase; HET: BHG FAD UQ5; 2.50A {Sus scrofa} SCOP: c.3.1.2 d.16.1.8 d.58.1.6 PDB: 2gmj_A*
Probab=98.61 E-value=1.1e-07 Score=97.56 Aligned_cols=41 Identities=41% Similarity=0.710 Sum_probs=36.9
Q ss_pred CCcEEEECCChHHHHHHHHHHHC------CCeEEEEecCCCCCceee
Q 011787 43 ENDVVVIGGGPGGYVAAIKAAQL------GLKTTCIEKRGALGGTCL 83 (477)
Q Consensus 43 ~~dvvIIGgG~AGl~aA~~l~~~------g~~V~lie~~~~~GG~~~ 83 (477)
++||+|||||+||+++|..|++. |.+|+||||...+|+...
T Consensus 35 ~~DVvIVGaG~aGlaaA~~La~~~~~~~~G~~V~vlEk~~~~g~~~~ 81 (584)
T 2gmh_A 35 EADVVIVGAGPAGLSAATRLKQLAAQHEKDLRVCLVEKAAHIGAHTL 81 (584)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHHHHHTTCCCCEEEECSSSSTTTTCC
T ss_pred CCCEEEECcCHHHHHHHHHHHhcccccCCCCcEEEEeCCCCCCCccc
Confidence 48999999999999999999998 999999999887776543
No 151
>2qa1_A PGAE, polyketide oxygenase PGAE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 1.80A {Streptomyces}
Probab=98.61 E-value=8.7e-08 Score=96.50 Aligned_cols=41 Identities=22% Similarity=0.387 Sum_probs=35.5
Q ss_pred CCCCCCcEEEECCChHHHHHHHHHHHCCCeEEEEecCCCCC
Q 011787 39 SASDENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGALG 79 (477)
Q Consensus 39 ~~~~~~dvvIIGgG~AGl~aA~~l~~~g~~V~lie~~~~~G 79 (477)
++..++||+||||||+|+++|..|++.|.+|+|+||....+
T Consensus 7 ~~~~~~dVlIVGaGpaGl~~A~~La~~G~~v~vlE~~~~~~ 47 (500)
T 2qa1_A 7 HHRSDAAVIVVGAGPAGMMLAGELRLAGVEVVVLERLVERT 47 (500)
T ss_dssp -CCSBCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCCC-C
T ss_pred CccCCCCEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCCC
Confidence 34567899999999999999999999999999999976553
No 152
>2e4g_A Tryptophan halogenase; flavin-binding, rebeccamycin biosynthesis, biosynthetic protein, flavoprotein; HET: TRP; 2.08A {Lechevalieria aerocolonigenes} PDB: 2o9z_A 2oa1_A* 2oal_A* 2oam_A
Probab=98.60 E-value=1.6e-07 Score=95.97 Aligned_cols=58 Identities=12% Similarity=0.211 Sum_probs=45.4
Q ss_pred HHHHHHHHHHHHhc-CcEEEeCceEEEEEEcCCe--EEEEEeecCCCceEEEEcCEEEEeecCCCCC
Q 011787 255 GEIRKQFQRSLEKQ-KMKFMLKTKVVGVDLSGDG--VKLTLEPAAGGEKTILEADVVLVSAGRTPFT 318 (477)
Q Consensus 255 ~~~~~~~~~~l~~~-gv~~~~~~~v~~i~~~~~~--~~v~~~~~~~~~~~~i~~D~vi~a~G~~p~~ 318 (477)
..+.+.+.+.+++. |++++++ +|+++..++++ +.+++. +++++.+|.||.|+|..+..
T Consensus 194 ~~l~~~L~~~~~~~~Gv~i~~~-~V~~i~~~~~g~~~~v~~~-----~G~~i~ad~vI~A~G~~S~~ 254 (550)
T 2e4g_A 194 HLVADFLRRFATEKLGVRHVED-RVEHVQRDANGNIESVRTA-----TGRVFDADLFVDCSGFRGLL 254 (550)
T ss_dssp HHHHHHHHHHHHHHSCCEEEEC-CEEEEEECTTSCEEEEEET-----TSCEEECSEEEECCGGGCCC
T ss_pred HHHHHHHHHHHHhcCCcEEEEC-eEeEEEEcCCCCEEEEEEC-----CCCEEECCEEEECCCCchhh
Confidence 35777888888888 9999999 99999875544 345543 45689999999999987755
No 153
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=98.59 E-value=2.2e-07 Score=87.82 Aligned_cols=100 Identities=19% Similarity=0.280 Sum_probs=79.5
Q ss_pred CeeEEEcccHHHHHHHHHHHHcCCcEEEEEeC--CCc--------CCCC----CHHHHHHHHHHHHhcCcEEEeCceEEE
Q 011787 215 KKLVVIGAGYIGLEMGSVWARLGSEVTVVEFA--ADI--------VPSM----DGEIRKQFQRSLEKQKMKFMLKTKVVG 280 (477)
Q Consensus 215 ~~v~IiG~G~~g~e~a~~l~~~g~~Vtli~~~--~~~--------~~~~----~~~~~~~~~~~l~~~gv~~~~~~~v~~ 280 (477)
.+|+|||+|+.|+.+|..|++.|.+|+++++. ..+ .+.+ ..++.+.+.+.+++.|++++. .+|.+
T Consensus 16 ~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~-~~v~~ 94 (323)
T 3f8d_A 16 FDVIIVGLGPAAYGAALYSARYMLKTLVIGETPGGQLTEAGIVDDYLGLIEIQASDMIKVFNKHIEKYEVPVLL-DIVEK 94 (323)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEESSTTGGGGGCCEECCSTTSTTEEHHHHHHHHHHHHHTTTCCEEE-SCEEE
T ss_pred cCEEEECccHHHHHHHHHHHHCCCcEEEEeccCCCeecccccccccCCCCCCCHHHHHHHHHHHHHHcCCEEEE-EEEEE
Confidence 58999999999999999999999999999986 111 1222 246777778888889999998 89999
Q ss_pred EEEcCCeEEEEEeecCCCceEEEEcCEEEEeecCCCCCCC
Q 011787 281 VDLSGDGVKLTLEPAAGGEKTILEADVVLVSAGRTPFTAG 320 (477)
Q Consensus 281 i~~~~~~~~v~~~~~~~~~~~~i~~D~vi~a~G~~p~~~~ 320 (477)
++.+++.+.+.+. ++.++.+|.+|+|+|..|+...
T Consensus 95 i~~~~~~~~v~~~-----~g~~~~~d~lvlAtG~~~~~~~ 129 (323)
T 3f8d_A 95 IENRGDEFVVKTK-----RKGEFKADSVILGIGVKRRKLG 129 (323)
T ss_dssp EEEC--CEEEEES-----SSCEEEEEEEEECCCCEECCCC
T ss_pred EEecCCEEEEEEC-----CCCEEEcCEEEECcCCCCccCC
Confidence 9887777777664 4568999999999999887643
No 154
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=98.59 E-value=1.8e-07 Score=88.94 Aligned_cols=100 Identities=21% Similarity=0.295 Sum_probs=81.0
Q ss_pred CeeEEEcccHHHHHHHHHHHHcCCcEEEEEeCCCcC---------------CCC----CHHHHHHHHHHHHhcCcEEEeC
Q 011787 215 KKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIV---------------PSM----DGEIRKQFQRSLEKQKMKFMLK 275 (477)
Q Consensus 215 ~~v~IiG~G~~g~e~a~~l~~~g~~Vtli~~~~~~~---------------~~~----~~~~~~~~~~~l~~~gv~~~~~ 275 (477)
.+|+|||+|+.|+.+|..|++.|.+|+++++.+.+. +.+ ..++...+.+.+++.|++++++
T Consensus 8 ~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~gG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (332)
T 3lzw_A 8 YDITIIGGGPVGLFTAFYGGMRQASVKIIESLPQLGGQLSALYPEKYIYDVAGFPKIRAQELINNLKEQMAKFDQTICLE 87 (332)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHHHHCTTSEECCSTTCSSEEHHHHHHHHHHHHTTSCCEEECS
T ss_pred ceEEEECCCHHHHHHHHHHHHCCCCEEEEEcCCCCCceehhcCCCceEeccCCCCCCCHHHHHHHHHHHHHHhCCcEEcc
Confidence 579999999999999999999999999999976432 111 2567777888888889999999
Q ss_pred ceEEEEEEcCC-eEEEEEeecCCCceEEEEcCEEEEeecC---CCCCCC
Q 011787 276 TKVVGVDLSGD-GVKLTLEPAAGGEKTILEADVVLVSAGR---TPFTAG 320 (477)
Q Consensus 276 ~~v~~i~~~~~-~~~v~~~~~~~~~~~~i~~D~vi~a~G~---~p~~~~ 320 (477)
++|.+++..++ .+.+.+. +++ +.+|.+|+|+|. .|+...
T Consensus 88 ~~v~~i~~~~~~~~~v~~~-----~g~-~~~d~vVlAtG~~~~~p~~~~ 130 (332)
T 3lzw_A 88 QAVESVEKQADGVFKLVTN-----EET-HYSKTVIITAGNGAFKPRKLE 130 (332)
T ss_dssp CCEEEEEECTTSCEEEEES-----SEE-EEEEEEEECCTTSCCEECCCC
T ss_pred CEEEEEEECCCCcEEEEEC-----CCE-EEeCEEEECCCCCcCCCCCCC
Confidence 99999988766 5666654 343 999999999999 776543
No 155
>3ihg_A RDME; flavoenzyme, anthracycline, polyketide biosynthesis, merohedral twinning, enzyme mechanism, hydroxylase, flavoprotein; HET: FAD VAK; 2.49A {Streptomyces purpurascens}
Probab=98.58 E-value=4.5e-07 Score=92.36 Aligned_cols=39 Identities=36% Similarity=0.623 Sum_probs=35.1
Q ss_pred CCCCcEEEECCChHHHHHHHHHHHCCCeEEEEecCCCCC
Q 011787 41 SDENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGALG 79 (477)
Q Consensus 41 ~~~~dvvIIGgG~AGl~aA~~l~~~g~~V~lie~~~~~G 79 (477)
+.++||+|||||++|+++|+.|++.|.+|+||||....+
T Consensus 3 ~~~~dVlIVGaG~aGl~~A~~La~~G~~v~viEr~~~~~ 41 (535)
T 3ihg_A 3 DHEVDVLVVGAGLGGLSTAMFLARQGVRVLVVERRPGLS 41 (535)
T ss_dssp CCSEEEEEECCSHHHHHHHHHHHTTTCCEEEECSSSSCC
T ss_pred CccCcEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCCC
Confidence 346899999999999999999999999999999976553
No 156
>3qj4_A Renalase; FAD/NAD(P)-binding rossmann fold superfamily, flavin contain oxidoreductase, monoamine oxidase, NAD, extracellular, oxidoreductase; HET: FAD; 2.50A {Homo sapiens}
Probab=98.57 E-value=1.9e-07 Score=89.31 Aligned_cols=40 Identities=23% Similarity=0.298 Sum_probs=37.0
Q ss_pred CcEEEECCChHHHHHHHHHHH---CCCeEEEEecCCCCCceee
Q 011787 44 NDVVVIGGGPGGYVAAIKAAQ---LGLKTTCIEKRGALGGTCL 83 (477)
Q Consensus 44 ~dvvIIGgG~AGl~aA~~l~~---~g~~V~lie~~~~~GG~~~ 83 (477)
+||+|||||++|+++|+.|++ .|++|+|+||+..+||.+.
T Consensus 2 ~dV~IIGaG~aGl~~A~~L~~~~~~G~~V~v~Ek~~~~gg~~~ 44 (342)
T 3qj4_A 2 AQVLIVGAGMTGSLCAALLRRQTSGPLYLAVWDKADDSGGRMT 44 (342)
T ss_dssp EEEEEECCSHHHHHHHHHHHSCC-CCEEEEEECSSSSSCGGGC
T ss_pred CcEEEECCcHHHHHHHHHHHhhccCCceEEEEECCCCCcccee
Confidence 699999999999999999999 8999999999988888654
No 157
>3atr_A Conserved archaeal protein; saturating double bonds, archaeal membrane precursor, like 2 geranylgeranylglyceryl phosphate; HET: FDA; 1.80A {Sulfolobus acidocaldarius} PDB: 3atq_A*
Probab=98.56 E-value=4e-08 Score=97.92 Aligned_cols=37 Identities=32% Similarity=0.468 Sum_probs=33.9
Q ss_pred CCCCcEEEECCChHHHHHHHHHHHCCCeEEEEecCCC
Q 011787 41 SDENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGA 77 (477)
Q Consensus 41 ~~~~dvvIIGgG~AGl~aA~~l~~~g~~V~lie~~~~ 77 (477)
+.++||+|||||+||+++|..|++.|.+|+|+|+...
T Consensus 4 ~~~~dVvIVGaG~aGl~aA~~La~~G~~V~vlE~~~~ 40 (453)
T 3atr_A 4 ELKYDVLIIGGGFAGSSAAYQLSRRGLKILLVDSKPW 40 (453)
T ss_dssp EEECSEEEECCSHHHHHHHHHHSSSSCCEEEECSSCG
T ss_pred CCcCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCC
Confidence 3458999999999999999999999999999999764
No 158
>2h88_A Succinate dehydrogenase flavoprotein subunit; complex II, membrane protein, heme protein, iron sulfur PROT cytochrome B, oxidoreductase; HET: FAD BHG HEM UNL; 1.74A {Gallus gallus} PDB: 1yq4_A* 1yq3_A* 2fbw_A* 2h89_A* 2wqy_A* 1zoy_A* 1zp0_A* 3abv_A* 3ae1_A* 3ae2_A* 3ae3_A* 3ae4_A* 3ae5_A* 3ae6_A* 3ae7_A* 3ae8_A* 3ae9_A* 3aea_A* 3aeb_A* 3aec_A* ...
Probab=98.56 E-value=1.9e-07 Score=96.06 Aligned_cols=38 Identities=34% Similarity=0.516 Sum_probs=34.2
Q ss_pred CCCcEEEECCChHHHHHHHHHHHCCCeEEEEecCCCCC
Q 011787 42 DENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGALG 79 (477)
Q Consensus 42 ~~~dvvIIGgG~AGl~aA~~l~~~g~~V~lie~~~~~G 79 (477)
.++||||||||+||++||+.|++.|.+|+|+||....+
T Consensus 17 ~~~DVvVVG~G~AGl~AAl~aa~~G~~V~vlEK~~~~~ 54 (621)
T 2h88_A 17 HEFDAVVVGAGGAGLRAAFGLSEAGFNTACVTKLFPTR 54 (621)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSCGGG
T ss_pred ccCCEEEECccHHHHHHHHHHHHCCCcEEEEeccCCCC
Confidence 35899999999999999999999999999999976543
No 159
>4gut_A Lysine-specific histone demethylase 1B; histone demethylase; HET: FAD PGE; 2.00A {Homo sapiens} PDB: 4gur_A* 4gus_A* 4guu_A* 4fwe_A* 4fwf_A* 4fwj_A* 4gu1_A*
Probab=98.56 E-value=4.4e-09 Score=110.74 Aligned_cols=41 Identities=34% Similarity=0.703 Sum_probs=37.7
Q ss_pred CCCCcEEEECCChHHHHHHHHHHHCCCeEEEEecCCCCCce
Q 011787 41 SDENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGALGGT 81 (477)
Q Consensus 41 ~~~~dvvIIGgG~AGl~aA~~l~~~g~~V~lie~~~~~GG~ 81 (477)
...+||+|||||++|++||..|++.|++|+|+|+.+.+||.
T Consensus 334 ~~~~~v~viG~G~~Gl~aA~~l~~~g~~v~v~E~~~~~ggr 374 (776)
T 4gut_A 334 YHNKSVIIIGAGPAGLAAARQLHNFGIKVTVLEAKDRIGGR 374 (776)
T ss_dssp GTSCEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSSCTT
T ss_pred CCCCeEEEECCCHHHHHHHHHHHHCCCcEEEEecccceece
Confidence 34689999999999999999999999999999998888883
No 160
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=98.56 E-value=3.5e-07 Score=87.15 Aligned_cols=104 Identities=20% Similarity=0.247 Sum_probs=83.2
Q ss_pred CCeeEEEcccHHHHHHHHHHHHcCCcEEEEEeCC----Cc------------CCCC-----CHHHHHHHHHHHHhcCcEE
Q 011787 214 PKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAA----DI------------VPSM-----DGEIRKQFQRSLEKQKMKF 272 (477)
Q Consensus 214 ~~~v~IiG~G~~g~e~a~~l~~~g~~Vtli~~~~----~~------------~~~~-----~~~~~~~~~~~l~~~gv~~ 272 (477)
.++|+|||+|+.|+.+|..|++.|.+|+++++.+ .+ .+.+ ..++...+.+.+++.|+++
T Consensus 22 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~vie~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~i 101 (338)
T 3itj_A 22 HNKVTIIGSGPAAHTAAIYLARAEIKPILYEGMMANGIAAGGQLTTTTEIENFPGFPDGLTGSELMDRMREQSTKFGTEI 101 (338)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCCEEECCSSBTTBCTTCGGGGSSEECCSTTCTTCEEHHHHHHHHHHHHHHTTCEE
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCCEEEEecCCCCCCCcCcccccchhhcccCCCcccCCHHHHHHHHHHHHHHcCCEE
Confidence 5789999999999999999999999999999854 11 1222 2477788888899999999
Q ss_pred EeCceEEEEEEcCCeEEEEEeecCCCceEEEEcCEEEEeecCCCCCCC
Q 011787 273 MLKTKVVGVDLSGDGVKLTLEPAAGGEKTILEADVVLVSAGRTPFTAG 320 (477)
Q Consensus 273 ~~~~~v~~i~~~~~~~~v~~~~~~~~~~~~i~~D~vi~a~G~~p~~~~ 320 (477)
+.++ +.+++.+++.+.+... ...++..+.+|.+|+|+|.+|+...
T Consensus 102 ~~~~-v~~i~~~~~~~~v~~~--~~~~~~~~~~d~vvlAtG~~~~~~~ 146 (338)
T 3itj_A 102 ITET-VSKVDLSSKPFKLWTE--FNEDAEPVTTDAIILATGASAKRMH 146 (338)
T ss_dssp ECSC-EEEEECSSSSEEEEET--TCSSSCCEEEEEEEECCCEEECCCC
T ss_pred EEeE-EEEEEEcCCEEEEEEE--ecCCCcEEEeCEEEECcCCCcCCCC
Confidence 9988 9999887777776653 1224568999999999999887653
No 161
>2bs2_A Quinol-fumarate reductase flavoprotein subunit A; 2Fe-2S, 3Fe-4S, 4Fe-4S, citric acid cycle, dihaem cytochrome B; HET: FAD HEM LMT; 1.78A {Wolinella succinogenes} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 2bs3_A* 1e7p_A* 2bs4_A* 1qlb_A*
Probab=98.55 E-value=2e-07 Score=96.56 Aligned_cols=37 Identities=35% Similarity=0.433 Sum_probs=33.9
Q ss_pred CCCcEEEECCChHHHHHHHHHHHCCCeEEEEecCCCC
Q 011787 42 DENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGAL 78 (477)
Q Consensus 42 ~~~dvvIIGgG~AGl~aA~~l~~~g~~V~lie~~~~~ 78 (477)
.++||||||||.||++||++|++.|.+|+||||....
T Consensus 4 ~~~DVvVIGgG~AGL~AAl~aae~G~~V~vlEK~~~~ 40 (660)
T 2bs2_A 4 QYCDSLVIGGGLAGLRAAVATQQKGLSTIVLSLIPVK 40 (660)
T ss_dssp EECSEEEECCSHHHHHHHHHHHTTTCCEEEECSSCGG
T ss_pred ccccEEEECchHHHHHHHHHHHHCCCcEEEEeccCCC
Confidence 3589999999999999999999999999999997654
No 162
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=98.55 E-value=7.2e-07 Score=84.91 Aligned_cols=96 Identities=19% Similarity=0.254 Sum_probs=77.6
Q ss_pred CeeEEEcccHHHHHHHHHHHHcCCcEEEEEeCCCcC---------------CCC----CHHHHHHHHHHHHhcCcEEEeC
Q 011787 215 KKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIV---------------PSM----DGEIRKQFQRSLEKQKMKFMLK 275 (477)
Q Consensus 215 ~~v~IiG~G~~g~e~a~~l~~~g~~Vtli~~~~~~~---------------~~~----~~~~~~~~~~~l~~~gv~~~~~ 275 (477)
.+|+|||+|+.|+.+|..|++.|.+|+++++.+.+. +.+ ..++...+.+.+++.+++++++
T Consensus 6 ~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 85 (335)
T 2zbw_A 6 TDVLIVGAGPTGLFAGFYVGMRGLSFRFVDPLPEPGGQLTALYPEKYIYDVAGFPKVYAKDLVKGLVEQVAPFNPVYSLG 85 (335)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSCHHHHHTCTTSEECCSTTCSSEEHHHHHHHHHHHHGGGCCEEEES
T ss_pred CcEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCCCCCeeeccCCCceeeccCCCCCCCHHHHHHHHHHHHHHcCCEEEeC
Confidence 579999999999999999999999999999876431 111 1456667777888889999999
Q ss_pred ceEEEEEEcCCeEEEEEeecCCCceEEEEcCEEEEeecCC
Q 011787 276 TKVVGVDLSGDGVKLTLEPAAGGEKTILEADVVLVSAGRT 315 (477)
Q Consensus 276 ~~v~~i~~~~~~~~v~~~~~~~~~~~~i~~D~vi~a~G~~ 315 (477)
++|..++.+++.+.+.+. ++.++.+|.+|+|+|..
T Consensus 86 ~~v~~i~~~~~~~~v~~~-----~g~~~~~~~lv~AtG~~ 120 (335)
T 2zbw_A 86 ERAETLEREGDLFKVTTS-----QGNAYTAKAVIIAAGVG 120 (335)
T ss_dssp CCEEEEEEETTEEEEEET-----TSCEEEEEEEEECCTTS
T ss_pred CEEEEEEECCCEEEEEEC-----CCCEEEeCEEEECCCCC
Confidence 999999887766666543 44679999999999984
No 163
>3fmw_A Oxygenase; mithramycin, baeyer-villiger, flavin binding protein, oxidoreductase; HET: FAD; 2.89A {Streptomyces argillaceus}
Probab=98.55 E-value=7.1e-08 Score=98.60 Aligned_cols=38 Identities=34% Similarity=0.381 Sum_probs=32.6
Q ss_pred CCCcEEEECCChHHHHHHHHHHHCCCeEEEEecCCCCC
Q 011787 42 DENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGALG 79 (477)
Q Consensus 42 ~~~dvvIIGgG~AGl~aA~~l~~~g~~V~lie~~~~~G 79 (477)
.++||+|||||++|+++|+.|++.|.+|+|||+.....
T Consensus 48 ~~~DVvIVGaG~aGL~~A~~La~~G~~V~VlEr~~~~~ 85 (570)
T 3fmw_A 48 LTTDVVVVGGGPVGLMLAGELRAGGVGALVLEKLVEPV 85 (570)
T ss_dssp ---CEEEECCSHHHHHHHHHHHHTTCCEEEEBSCSSCC
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCCEEEEcCCCCCC
Confidence 35899999999999999999999999999999976543
No 164
>2qcu_A Aerobic glycerol-3-phosphate dehydrogenase; glycerol-3-phoshate dehydrogenase, oxidoreductase; HET: BOG FAD TAM; 1.75A {Escherichia coli} PDB: 2r45_A* 2r46_A* 2r4e_A* 2r4j_A*
Probab=98.55 E-value=2e-06 Score=86.76 Aligned_cols=63 Identities=11% Similarity=0.069 Sum_probs=48.2
Q ss_pred CHHHHHHHHHHHHhcCcEEEeCceEEEEEEcCCeEEEEEeecCCCceEEEEcCEEEEeecCCC
Q 011787 254 DGEIRKQFQRSLEKQKMKFMLKTKVVGVDLSGDGVKLTLEPAAGGEKTILEADVVLVSAGRTP 316 (477)
Q Consensus 254 ~~~~~~~~~~~l~~~gv~~~~~~~v~~i~~~~~~~~v~~~~~~~~~~~~i~~D~vi~a~G~~p 316 (477)
+..+...+.+.+++.|++++++++|+++..+++...+++.+..++...++.+|.||+|+|...
T Consensus 148 ~~~l~~~l~~~a~~~Gv~i~~~~~V~~l~~~~~~~~V~~~d~~~G~~~~i~A~~VV~AtG~~s 210 (501)
T 2qcu_A 148 DARLVLANAQMVVRKGGEVLTRTRATSARRENGLWIVEAEDIDTGKKYSWQARGLVNATGPWV 210 (501)
T ss_dssp HHHHHHHHHHHHHHTTCEEECSEEEEEEEEETTEEEEEEEETTTCCEEEEEESCEEECCGGGH
T ss_pred HHHHHHHHHHHHHHcCCEEEcCcEEEEEEEeCCEEEEEEEECCCCCEEEEECCEEEECCChhH
Confidence 446777788888889999999999999988776556666432233335799999999999654
No 165
>2gjc_A Thiazole biosynthetic enzyme, mitochondrial; glutathione reductase type II family, thiazole synthase, mitochondria DNA repair; HET: AHZ; 1.82A {Saccharomyces cerevisiae} PDB: 3fpz_A*
Probab=98.55 E-value=5.9e-08 Score=90.87 Aligned_cols=39 Identities=38% Similarity=0.523 Sum_probs=35.8
Q ss_pred CCcEEEECCChHHHHHHHHHHHC--CCeEEEEecCCCCCce
Q 011787 43 ENDVVVIGGGPGGYVAAIKAAQL--GLKTTCIEKRGALGGT 81 (477)
Q Consensus 43 ~~dvvIIGgG~AGl~aA~~l~~~--g~~V~lie~~~~~GG~ 81 (477)
.+||+|||||++|+++|..|++. |++|+|+|+...+||.
T Consensus 65 ~~dv~IiG~G~aGl~aA~~la~~~~g~~V~v~e~~~~~ggg 105 (326)
T 2gjc_A 65 VSDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAPGGG 105 (326)
T ss_dssp EESEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSSSCCTT
T ss_pred cCCEEEECccHHHHHHHHHHHhcCCCCeEEEEecCcccccc
Confidence 46999999999999999999998 9999999998888754
No 166
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=98.54 E-value=7.3e-07 Score=88.91 Aligned_cols=106 Identities=21% Similarity=0.305 Sum_probs=80.6
Q ss_pred CeeEEEcccHHHHHHHHHHHH---cCCc---EEEEEeCCCcCC-------------------------------------
Q 011787 215 KKLVVIGAGYIGLEMGSVWAR---LGSE---VTVVEFAADIVP------------------------------------- 251 (477)
Q Consensus 215 ~~v~IiG~G~~g~e~a~~l~~---~g~~---Vtli~~~~~~~~------------------------------------- 251 (477)
++|+|||||+.|+.+|..|++ .|.+ |+++++.+.+..
T Consensus 3 ~~V~IIGaG~aGl~aA~~L~~~~~~G~~~~~V~v~E~~~~~GG~w~~~~~~g~~~~g~~~~~~~y~~l~~~~~~~~~~~~ 82 (464)
T 2xve_A 3 TRIAILGAGPSGMAQLRAFQSAQEKGAEIPELVCFEKQADWGGQWNYTWRTGLDENGEPVHSSMYRYLWSNGPKECLEFA 82 (464)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHHHTTCCCCEEEEECSSSSSCGGGSCCSCCSBCTTSSBCCCCCCTTCBCSSCGGGTCBT
T ss_pred CcEEEECccHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCCEeecCCCCCccccCCCCcCccccchhhcCChhhcccC
Confidence 589999999999999999999 9999 999998764310
Q ss_pred CC---------------CHHHHHHHHHHHHhcCcE--EEeCceEEEEEEcCC--eEEEEEeecCCCceEEEEcCEEEEee
Q 011787 252 SM---------------DGEIRKQFQRSLEKQKMK--FMLKTKVVGVDLSGD--GVKLTLEPAAGGEKTILEADVVLVSA 312 (477)
Q Consensus 252 ~~---------------~~~~~~~~~~~l~~~gv~--~~~~~~v~~i~~~~~--~~~v~~~~~~~~~~~~i~~D~vi~a~ 312 (477)
.+ ..++.+.+.+.+++.|++ +.++++|+.++..++ ...+++.+..++...++.+|.||+|+
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~gv~~~i~~~~~V~~v~~~~~~~~~~V~~~~~~~g~~~~~~~d~VVvAt 162 (464)
T 2xve_A 83 DYTFDEHFGKPIASYPPREVLWDYIKGRVEKAGVRKYIRFNTAVRHVEFNEDSQTFTVTVQDHTTDTIYSEEFDYVVCCT 162 (464)
T ss_dssp TBCHHHHHSSCCCSSCBHHHHHHHHHHHHHHHTCGGGEECSEEEEEEEEETTTTEEEEEEEETTTTEEEEEEESEEEECC
T ss_pred CCCCCcccCCCCCCCCCHHHHHHHHHHHHHHcCCcceEEeCCEEEEEEEcCCCCcEEEEEEEcCCCceEEEEcCEEEECC
Confidence 00 034556677777777888 889999999987765 56666654323333679999999999
Q ss_pred c--CCCCCCC
Q 011787 313 G--RTPFTAG 320 (477)
Q Consensus 313 G--~~p~~~~ 320 (477)
| ..|+...
T Consensus 163 G~~s~p~~p~ 172 (464)
T 2xve_A 163 GHFSTPYVPE 172 (464)
T ss_dssp CSSSSBCCCC
T ss_pred CCCCCCccCC
Confidence 9 6777643
No 167
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=98.54 E-value=7.2e-07 Score=87.23 Aligned_cols=37 Identities=30% Similarity=0.522 Sum_probs=34.0
Q ss_pred CCCcEEEECCChHHHHHHHHHHHCCCeEEEEecCCCC
Q 011787 42 DENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGAL 78 (477)
Q Consensus 42 ~~~dvvIIGgG~AGl~aA~~l~~~g~~V~lie~~~~~ 78 (477)
..+||+|||||++|+++|..|++.|.+|+|+|+.+..
T Consensus 25 ~~~dV~IVGaG~aGl~~A~~L~~~G~~v~v~E~~~~~ 61 (398)
T 2xdo_A 25 SDKNVAIIGGGPVGLTMAKLLQQNGIDVSVYERDNDR 61 (398)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHTTTCEEEEEECSSST
T ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCc
Confidence 4689999999999999999999999999999997654
No 168
>3axb_A Putative oxidoreductase; dinucleotide-binding fold; HET: FAD; 1.92A {Aeropyrum pernix} PDB: 3vqr_A*
Probab=98.53 E-value=3.2e-07 Score=91.25 Aligned_cols=37 Identities=24% Similarity=0.196 Sum_probs=33.3
Q ss_pred CCCcEEEECCChHHHHHHHHHHHCC-CeEEEEecCCCC
Q 011787 42 DENDVVVIGGGPGGYVAAIKAAQLG-LKTTCIEKRGAL 78 (477)
Q Consensus 42 ~~~dvvIIGgG~AGl~aA~~l~~~g-~~V~lie~~~~~ 78 (477)
.++||+|||||++|+++|++|++.| .+|+|||++..+
T Consensus 22 ~~~dVvIIGgGiaGls~A~~La~~G~~~V~vlE~~~~~ 59 (448)
T 3axb_A 22 PRFDYVVVGAGVVGLAAAYYLKVWSGGSVLVVDAGHAP 59 (448)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHHHCSCEEEEESSSST
T ss_pred CcCCEEEECcCHHHHHHHHHHHhCCCCcEEEEccCCCC
Confidence 4689999999999999999999999 999999994443
No 169
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=98.52 E-value=5.3e-07 Score=84.16 Aligned_cols=99 Identities=17% Similarity=0.238 Sum_probs=78.0
Q ss_pred CeeEEEcccHHHHHHHHHHHHcCCcEEEEEeCCCc---------CCCC----CHHHHHHHHHHHHhc-CcEEEeCceEEE
Q 011787 215 KKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADI---------VPSM----DGEIRKQFQRSLEKQ-KMKFMLKTKVVG 280 (477)
Q Consensus 215 ~~v~IiG~G~~g~e~a~~l~~~g~~Vtli~~~~~~---------~~~~----~~~~~~~~~~~l~~~-gv~~~~~~~v~~ 280 (477)
.+|+|||+|+.|+.+|..|++.|.+|+++++.+.. ++.. ..++...+.+.+++. +++++. .+++.
T Consensus 3 ~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~-~~v~~ 81 (297)
T 3fbs_A 3 FDVIIIGGSYAGLSAALQLGRARKNILLVDAGERRNRFASHSHGFLGQDGKAPGEIIAEARRQIERYPTIHWVE-GRVTD 81 (297)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEECCCCGGGGCSCCCSSTTCTTCCHHHHHHHHHHHHTTCTTEEEEE-SCEEE
T ss_pred CCEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCcccccchhhcCCcCCCCCCHHHHHHHHHHHHHhcCCeEEEE-eEEEE
Confidence 47999999999999999999999999999975422 1111 135667777777776 788875 58999
Q ss_pred EEEcCCeEEEEEeecCCCceEEEEcCEEEEeecCCCCCC
Q 011787 281 VDLSGDGVKLTLEPAAGGEKTILEADVVLVSAGRTPFTA 319 (477)
Q Consensus 281 i~~~~~~~~v~~~~~~~~~~~~i~~D~vi~a~G~~p~~~ 319 (477)
++.+++...+.+. ++.++.+|.+|+|+|..|+..
T Consensus 82 i~~~~~~~~v~~~-----~g~~~~~d~vviAtG~~~~~~ 115 (297)
T 3fbs_A 82 AKGSFGEFIVEID-----GGRRETAGRLILAMGVTDELP 115 (297)
T ss_dssp EEEETTEEEEEET-----TSCEEEEEEEEECCCCEEECC
T ss_pred EEEcCCeEEEEEC-----CCCEEEcCEEEECCCCCCCCC
Confidence 9888777777764 456899999999999988764
No 170
>1k0i_A P-hydroxybenzoate hydroxylase; PHBH, FAD, P-OHB, hydrolase; HET: FAD PHB; 1.80A {Pseudomonas aeruginosa} SCOP: c.3.1.2 d.16.1.2 PDB: 1k0j_A* 1k0l_A* 1doc_A* 1d7l_A* 1dod_A* 1doe_A* 1ius_A* 1iut_A* 1iuu_A* 1iuv_A* 1iuw_A* 1iux_A* 1pxb_A* 1pxc_A* 1dob_A* 1ykj_A* 1pxa_A* 1pbe_A* 1pdh_A* 1phh_A* ...
Probab=98.52 E-value=1.2e-07 Score=92.68 Aligned_cols=35 Identities=23% Similarity=0.534 Sum_probs=32.4
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCeEEEEecCCC
Q 011787 43 ENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGA 77 (477)
Q Consensus 43 ~~dvvIIGgG~AGl~aA~~l~~~g~~V~lie~~~~ 77 (477)
++||+|||||++|+++|..|++.|.+|+|+|+...
T Consensus 2 ~~dV~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~~ 36 (394)
T 1k0i_A 2 KTQVAIIGAGPSGLLLGQLLHKAGIDNVILERQTP 36 (394)
T ss_dssp BCSEEEECCSHHHHHHHHHHHHHTCCEEEECSSCH
T ss_pred CccEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCC
Confidence 37999999999999999999999999999999653
No 171
>2aqj_A Tryptophan halogenase, pRNA; flavin-dependent halogenase, helical bundle, sandwiched sheets, structural genomics; HET: TRP FAD; 1.80A {Pseudomonas fluorescens} PDB: 2apg_A* 2ar8_A* 2ard_A* 2jkc_A*
Probab=98.51 E-value=5.9e-07 Score=91.48 Aligned_cols=35 Identities=29% Similarity=0.489 Sum_probs=32.6
Q ss_pred CCCcEEEECCChHHHHHHHHHHH---CCCeEEEEecCC
Q 011787 42 DENDVVVIGGGPGGYVAAIKAAQ---LGLKTTCIEKRG 76 (477)
Q Consensus 42 ~~~dvvIIGgG~AGl~aA~~l~~---~g~~V~lie~~~ 76 (477)
..+||+|||||++|+++|..|++ .|.+|+|||+..
T Consensus 4 ~~~dVvIVGgG~aGl~aA~~La~~~~~G~~V~liE~~~ 41 (538)
T 2aqj_A 4 PIKNIVIVGGGTAGWMAASYLVRALQQQANITLIESAA 41 (538)
T ss_dssp BCCEEEEECCSHHHHHHHHHHHHHCCSSCEEEEEECSS
T ss_pred CCCeEEEECCCHHHHHHHHHHHhhcCCCCEEEEECCCC
Confidence 46899999999999999999999 999999999954
No 172
>2qa2_A CABE, polyketide oxygenase CABE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 2.70A {Streptomyces}
Probab=98.51 E-value=5.4e-07 Score=90.71 Aligned_cols=39 Identities=23% Similarity=0.388 Sum_probs=34.8
Q ss_pred CCCCcEEEECCChHHHHHHHHHHHCCCeEEEEecCCCCC
Q 011787 41 SDENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGALG 79 (477)
Q Consensus 41 ~~~~dvvIIGgG~AGl~aA~~l~~~g~~V~lie~~~~~G 79 (477)
..++||+||||||+|+++|..|++.|.+|+|||+....+
T Consensus 10 ~~~~dVlIVGaGpaGl~~A~~La~~G~~v~vlE~~~~~~ 48 (499)
T 2qa2_A 10 RSDASVIVVGAGPAGLMLAGELRLGGVDVMVLEQLPQRT 48 (499)
T ss_dssp -CCEEEEEECCSHHHHHHHHHHHHTTCCEEEEESCSSCC
T ss_pred CCCCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCC
Confidence 356899999999999999999999999999999976553
No 173
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=98.50 E-value=8.9e-07 Score=83.33 Aligned_cols=99 Identities=22% Similarity=0.309 Sum_probs=78.3
Q ss_pred eeEEEcccHHHHHHHHHHHHcCC-cEEEEEeCCC-----------cCCCC----C-HHHHHHHHHHHHhcCcEEEeCceE
Q 011787 216 KLVVIGAGYIGLEMGSVWARLGS-EVTVVEFAAD-----------IVPSM----D-GEIRKQFQRSLEKQKMKFMLKTKV 278 (477)
Q Consensus 216 ~v~IiG~G~~g~e~a~~l~~~g~-~Vtli~~~~~-----------~~~~~----~-~~~~~~~~~~l~~~gv~~~~~~~v 278 (477)
+++|||+|+.|+.+|..|++.|. +|+++++... ..+.+ + .++.+.+.+.+++.|++++. .++
T Consensus 3 dvvIIG~G~aGl~aA~~l~~~g~~~v~lie~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~~~~-~~v 81 (311)
T 2q0l_A 3 DCAIIGGGPAGLSAGLYATRGGVKNAVLFEKGMPGGQITGSSEIENYPGVKEVVSGLDFMQPWQEQCFRFGLKHEM-TAV 81 (311)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCSSEEEECSSSTTCGGGGCSCBCCSTTCCSCBCHHHHHHHHHHHHHTTSCEEEC-SCE
T ss_pred eEEEECccHHHHHHHHHHHHCCCCcEEEEcCCCCCcccccccccccCCCCcccCCHHHHHHHHHHHHHHcCCEEEE-EEE
Confidence 68999999999999999999999 9999998531 01222 1 45677777888888999987 789
Q ss_pred EEEEEcCCeEEEEEeecCCCceEEEEcCEEEEeecCCCCCCC
Q 011787 279 VGVDLSGDGVKLTLEPAAGGEKTILEADVVLVSAGRTPFTAG 320 (477)
Q Consensus 279 ~~i~~~~~~~~v~~~~~~~~~~~~i~~D~vi~a~G~~p~~~~ 320 (477)
..++.+++.+.+.+. ++.++.+|.+|+|+|..|....
T Consensus 82 ~~i~~~~~~~~v~~~-----~g~~~~~~~vv~AtG~~~~~~~ 118 (311)
T 2q0l_A 82 QRVSKKDSHFVILAE-----DGKTFEAKSVIIATGGSPKRTG 118 (311)
T ss_dssp EEEEEETTEEEEEET-----TSCEEEEEEEEECCCEEECCCC
T ss_pred EEEEEcCCEEEEEEc-----CCCEEECCEEEECCCCCCCCCC
Confidence 999887776666553 4568999999999998886543
No 174
>3c4n_A Uncharacterized protein DR_0571; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.40A {Deinococcus radiodurans R1}
Probab=98.49 E-value=5.5e-07 Score=88.28 Aligned_cols=38 Identities=34% Similarity=0.435 Sum_probs=34.0
Q ss_pred CCCcEEEECCChHHHHHHHHHHHC--CCeEEEEecCCCCC
Q 011787 42 DENDVVVIGGGPGGYVAAIKAAQL--GLKTTCIEKRGALG 79 (477)
Q Consensus 42 ~~~dvvIIGgG~AGl~aA~~l~~~--g~~V~lie~~~~~G 79 (477)
.++||+|||||++|+++|+.|++. |.+|+|||+....+
T Consensus 35 ~~~dVvIIGaGi~Gls~A~~La~~~pG~~V~vlE~~~~~~ 74 (405)
T 3c4n_A 35 EAFDIVVIGAGRMGAACAFYLRQLAPGRSLLLVEEGGLPN 74 (405)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSCSSC
T ss_pred CcCCEEEECCcHHHHHHHHHHHhcCCCCeEEEEeCCCCCC
Confidence 358999999999999999999999 99999999975443
No 175
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=98.48 E-value=1.3e-06 Score=86.90 Aligned_cols=106 Identities=19% Similarity=0.179 Sum_probs=79.7
Q ss_pred CCeeEEEcccHHHHHHHHHHHHcCC--cEEEEEeCCCcCC---C------------------------------------
Q 011787 214 PKKLVVIGAGYIGLEMGSVWARLGS--EVTVVEFAADIVP---S------------------------------------ 252 (477)
Q Consensus 214 ~~~v~IiG~G~~g~e~a~~l~~~g~--~Vtli~~~~~~~~---~------------------------------------ 252 (477)
..+|+|||||+.|+.+|..|++.|. +|+++++.+.+.. .
T Consensus 6 ~~dV~IIGaG~aGl~aA~~L~~~G~~~~V~v~E~~~~~GG~~~~~~~~~~~~~ip~~~~~~~~~~~~~g~~~~~~~~~~~ 85 (447)
T 2gv8_A 6 IRKIAIIGAGPSGLVTAKALLAEKAFDQVTLFERRGSPGGVWNYTSTLSNKLPVPSTNPILTTEPIVGPAALPVYPSPLY 85 (447)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTCCSEEEEECSSSSSSTTCSCCSCCCSCCCSSBCCTTCCCCCBCCSSSCCBCCCCCC
T ss_pred CCEEEEECccHHHHHHHHHHHhcCCCCCeEEEecCCCCCCeecCCCCCCcccccccccccccccccccccccCCccCchh
Confidence 4689999999999999999999999 9999998753310 0
Q ss_pred -------------C--------------CHHHHHHHHHHHHhcCcEEEeCceEEEEEEcCCeEEEEEeecCCCc-eEEEE
Q 011787 253 -------------M--------------DGEIRKQFQRSLEKQKMKFMLKTKVVGVDLSGDGVKLTLEPAAGGE-KTILE 304 (477)
Q Consensus 253 -------------~--------------~~~~~~~~~~~l~~~gv~~~~~~~v~~i~~~~~~~~v~~~~~~~~~-~~~i~ 304 (477)
+ ..++.+.+.+..++.+..++++++|++++..++.+.+++.+..++. ..++.
T Consensus 86 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~i~~~t~V~~v~~~~~~~~V~~~~~~~G~~~~~~~ 165 (447)
T 2gv8_A 86 RDLQTNTPIELMGYCDQSFKPQTLQFPHRHTIQEYQRIYAQPLLPFIKLATDVLDIEKKDGSWVVTYKGTKAGSPISKDI 165 (447)
T ss_dssp TTCBCSSCHHHHSCTTCCCCTTCCSSCBHHHHHHHHHHHHGGGGGGEECSEEEEEEEEETTEEEEEEEESSTTCCEEEEE
T ss_pred hhhccCCCHHHhccCCCCCCCCCCCCCCHHHHHHHHHHHHHHhhCeEEeCCEEEEEEeCCCeEEEEEeecCCCCeeEEEE
Confidence 0 0134555666666667788899999999888877777776422222 23799
Q ss_pred cCEEEEeecC--CCCCC
Q 011787 305 ADVVLVSAGR--TPFTA 319 (477)
Q Consensus 305 ~D~vi~a~G~--~p~~~ 319 (477)
+|.||+|+|. .|+..
T Consensus 166 ~d~VVvAtG~~s~p~~p 182 (447)
T 2gv8_A 166 FDAVSICNGHYEVPYIP 182 (447)
T ss_dssp ESEEEECCCSSSSBCBC
T ss_pred eCEEEECCCCCCCCCCC
Confidence 9999999998 66654
No 176
>2rgh_A Alpha-glycerophosphate oxidase; flavoprotein oxidase, oxidoreductase; HET: FAD; 2.30A {Streptococcus SP} PDB: 2rgo_A*
Probab=98.48 E-value=1.5e-06 Score=88.86 Aligned_cols=62 Identities=18% Similarity=0.209 Sum_probs=47.3
Q ss_pred CHHHHHHHHHHHHhcCcEEEeCceEEEEEEcCCeEE-EEEeecCCCceEEEEcCEEEEeecCC
Q 011787 254 DGEIRKQFQRSLEKQKMKFMLKTKVVGVDLSGDGVK-LTLEPAAGGEKTILEADVVLVSAGRT 315 (477)
Q Consensus 254 ~~~~~~~~~~~l~~~gv~~~~~~~v~~i~~~~~~~~-v~~~~~~~~~~~~i~~D~vi~a~G~~ 315 (477)
+..+...+.+.+++.|++++++++|+++..+++++. +++.+..++++.++.+|.||+|+|..
T Consensus 187 ~~~l~~~l~~~a~~~Ga~i~~~t~V~~l~~~~~~v~gV~~~d~~tg~~~~i~A~~VV~AaG~w 249 (571)
T 2rgh_A 187 DARLVIDNIKKAAEDGAYLVSKMKAVGFLYEGDQIVGVKARDLLTDEVIEIKAKLVINTSGPW 249 (571)
T ss_dssp HHHHHHHHHHHHHHTTCEEESSEEEEEEEEETTEEEEEEEEETTTCCEEEEEBSCEEECCGGG
T ss_pred hHHHHHHHHHHHHHcCCeEEeccEEEEEEEeCCEEEEEEEEEcCCCCEEEEEcCEEEECCChh
Confidence 445666677778889999999999999988777643 55544334455589999999999954
No 177
>2dkh_A 3-hydroxybenzoate hydroxylase; flavoprotein, monooxygenase, complex, oxidoreductase; HET: FAD 3HB; 1.80A {Comamonas testosteroni} PDB: 2dki_A*
Probab=98.48 E-value=4.3e-07 Score=94.36 Aligned_cols=40 Identities=25% Similarity=0.454 Sum_probs=35.4
Q ss_pred CCCCCcEEEECCChHHHHHHHHHHH-CCCeEEEEecCCCCC
Q 011787 40 ASDENDVVVIGGGPGGYVAAIKAAQ-LGLKTTCIEKRGALG 79 (477)
Q Consensus 40 ~~~~~dvvIIGgG~AGl~aA~~l~~-~g~~V~lie~~~~~G 79 (477)
+..++||+||||||+|+++|..|++ .|.+|+||||....+
T Consensus 29 ~~~~~dVlIVGaGpaGL~~A~~La~~~G~~V~viEr~~~~~ 69 (639)
T 2dkh_A 29 VPSQVDVLIVGCGPAGLTLAAQLAAFPDIRTCIVEQKEGPM 69 (639)
T ss_dssp CCSEEEEEEECCSHHHHHHHHHHTTCTTSCEEEECSSSSCC
T ss_pred CCCCCcEEEECcCHHHHHHHHHHHHhCCCCEEEEeCCCCCC
Confidence 3446899999999999999999999 999999999976553
No 178
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=98.47 E-value=1.5e-06 Score=83.69 Aligned_cols=98 Identities=14% Similarity=0.188 Sum_probs=78.6
Q ss_pred CCeeEEEcccHHHHHHHHHHHHcCCcEEEEEeCCCcC---------------CCC----CHHHHHHHHHHHHhcCcEEEe
Q 011787 214 PKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIV---------------PSM----DGEIRKQFQRSLEKQKMKFML 274 (477)
Q Consensus 214 ~~~v~IiG~G~~g~e~a~~l~~~g~~Vtli~~~~~~~---------------~~~----~~~~~~~~~~~l~~~gv~~~~ 274 (477)
..+|+|||+|+.|+.+|..|++.|.+|+++++.+.+. +.+ ..++.+.+.+.+++.++++++
T Consensus 14 ~~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 93 (360)
T 3ab1_A 14 MRDLTIIGGGPTGIFAAFQCGMNNISCRIIESMPQLGGQLAALYPEKHIYDVAGFPEVPAIDLVESLWAQAERYNPDVVL 93 (360)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHHHTCTTSEECCSTTCSSEEHHHHHHHHHHHHHTTCCEEEC
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCCEEEEecCCCCCCcccccCCCcccccCCCCCCCCHHHHHHHHHHHHHHhCCEEEc
Confidence 3579999999999999999999999999999876431 111 156677778888888999999
Q ss_pred CceEEEEEEcCC-eEEEEEeecCCCceEEEEcCEEEEeecCCC
Q 011787 275 KTKVVGVDLSGD-GVKLTLEPAAGGEKTILEADVVLVSAGRTP 316 (477)
Q Consensus 275 ~~~v~~i~~~~~-~~~v~~~~~~~~~~~~i~~D~vi~a~G~~p 316 (477)
+++|+.++..++ .+.+.+. ++.++.+|.+|+|+|..+
T Consensus 94 ~~~v~~i~~~~~~~~~v~~~-----~g~~~~~~~li~AtG~~~ 131 (360)
T 3ab1_A 94 NETVTKYTKLDDGTFETRTN-----TGNVYRSRAVLIAAGLGA 131 (360)
T ss_dssp SCCEEEEEECTTSCEEEEET-----TSCEEEEEEEEECCTTCS
T ss_pred CCEEEEEEECCCceEEEEEC-----CCcEEEeeEEEEccCCCc
Confidence 999999987654 5566653 456899999999999844
No 179
>3nlc_A Uncharacterized protein VP0956; FAD-binding protein, NESG, structural genomics, PSI-2, prote structure initiative; HET: FAD; 2.15A {Vibrio parahaemolyticus}
Probab=98.46 E-value=8.6e-07 Score=89.50 Aligned_cols=99 Identities=19% Similarity=0.333 Sum_probs=79.4
Q ss_pred CCeeEEEcccHHHHHHHHHHHHcCCcEEEEEeCCCc------------------------------------C------C
Q 011787 214 PKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADI------------------------------------V------P 251 (477)
Q Consensus 214 ~~~v~IiG~G~~g~e~a~~l~~~g~~Vtli~~~~~~------------------------------------~------~ 251 (477)
..+|+|||+|+.|+.+|..|++.|.+|+++++.+.+ + +
T Consensus 107 ~~DVVIVGgGpaGL~aA~~La~~G~kV~VlEr~~~~~~R~~~~~g~w~~~~~~~~~~i~~g~gGag~~sdgkl~~~i~~~ 186 (549)
T 3nlc_A 107 TERPIVIGFGPCGLFAGLVLAQMGFNPIIVERGKEVRERTKDTFGFWRKRTLNPESNVQFGEGGAGTFSDGKLYSQVKDP 186 (549)
T ss_dssp CCCCEEECCSHHHHHHHHHHHHTTCCCEEECSSCCHHHHHHHHHHHHHHCCCCTTSSSSSSTTGGGTTSCCCCCCCSCCT
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCeEEEEEccCcccccccchhcccccccccccccceeccCCcccccCCceEEEeccc
Confidence 468999999999999999999999999999987532 0 0
Q ss_pred CC------------------------------CHHHHHHHHHHHHhcCcEEEeCceEEEEEEcCCeEE-EEEeecCCCce
Q 011787 252 SM------------------------------DGEIRKQFQRSLEKQKMKFMLKTKVVGVDLSGDGVK-LTLEPAAGGEK 300 (477)
Q Consensus 252 ~~------------------------------~~~~~~~~~~~l~~~gv~~~~~~~v~~i~~~~~~~~-v~~~~~~~~~~ 300 (477)
.+ ...+.+.+.+.+++.|++++++++|+++..+++++. +++. ++
T Consensus 187 ~~~~~~v~~~~~~~G~~~~i~~~~~p~~G~~~~~~l~~~L~~~l~~~Gv~I~~~t~V~~I~~~~~~v~gV~l~-----~G 261 (549)
T 3nlc_A 187 NFYGRKVITEFVEAGAPEEILYVSKPHIGTFKLVTMIEKMRATIIELGGEIRFSTRVDDLHMEDGQITGVTLS-----NG 261 (549)
T ss_dssp TCHHHHHHHHHHHTTCCGGGGTBSSCCCCHHHHHHHHHHHHHHHHHTTCEEESSCCEEEEEESSSBEEEEEET-----TS
T ss_pred cccHHHHHHHHHHcCCCceEeeccccccccchHHHHHHHHHHHHHhcCCEEEeCCEEEEEEEeCCEEEEEEEC-----CC
Confidence 00 034555677778889999999999999988777654 6654 55
Q ss_pred EEEEcCEEEEeecCCCC
Q 011787 301 TILEADVVLVSAGRTPF 317 (477)
Q Consensus 301 ~~i~~D~vi~a~G~~p~ 317 (477)
+++.+|.||+|+|..+.
T Consensus 262 ~~i~Ad~VVlA~G~~s~ 278 (549)
T 3nlc_A 262 EEIKSRHVVLAVGHSAR 278 (549)
T ss_dssp CEEECSCEEECCCTTCH
T ss_pred CEEECCEEEECCCCChh
Confidence 68999999999999884
No 180
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=98.45 E-value=6.1e-07 Score=87.12 Aligned_cols=99 Identities=16% Similarity=0.275 Sum_probs=75.3
Q ss_pred CeeEEEcccHHHHHHHHHHHHcCCcEEEEEeCCCcC---CCCC---------HHHHHHHHHHHHhcCcEEEeCceEEEEE
Q 011787 215 KKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIV---PSMD---------GEIRKQFQRSLEKQKMKFMLKTKVVGVD 282 (477)
Q Consensus 215 ~~v~IiG~G~~g~e~a~~l~~~g~~Vtli~~~~~~~---~~~~---------~~~~~~~~~~l~~~gv~~~~~~~v~~i~ 282 (477)
-+|+|||||+.|+.+|..|...+.+|+++++.+.+. +.++ .++.....+.+++.|++++++++|++++
T Consensus 10 ~~~vIvGgG~AGl~aA~~L~~~~~~itlie~~~~~~y~~~~l~~~l~g~~~~~~l~~~~~~~~~~~~i~~~~~~~V~~id 89 (385)
T 3klj_A 10 TKILILGAGPAGFSAAKAALGKCDDITMINSEKYLPYYRPRLNEIIAKNKSIDDILIKKNDWYEKNNIKVITSEFATSID 89 (385)
T ss_dssp CSEEEECCSHHHHHHHHHHTTTCSCEEEECSSSSCCBCGGGHHHHHHSCCCGGGTBSSCHHHHHHTTCEEECSCCEEEEE
T ss_pred CCEEEEcCcHHHHHHHHHHhCCCCEEEEEECCCCCCcccChhhHHHcCCCCHHHccCCCHHHHHHCCCEEEeCCEEEEEE
Confidence 469999999999999999977888999999887641 1111 1111223456678899999999999998
Q ss_pred EcCCeEEEEEeecCCCceEEEEcCEEEEeecCCCCCCC
Q 011787 283 LSGDGVKLTLEPAAGGEKTILEADVVLVSAGRTPFTAG 320 (477)
Q Consensus 283 ~~~~~~~v~~~~~~~~~~~~i~~D~vi~a~G~~p~~~~ 320 (477)
.++..+ ++. +++++.+|.+|+|||.+|+...
T Consensus 90 ~~~~~v--~~~-----~g~~~~yd~lvlAtG~~p~~p~ 120 (385)
T 3klj_A 90 PNNKLV--TLK-----SGEKIKYEKLIIASGSIANKIK 120 (385)
T ss_dssp TTTTEE--EET-----TSCEEECSEEEECCCEEECCCC
T ss_pred CCCCEE--EEC-----CCCEEECCEEEEecCCCcCCCC
Confidence 766543 433 5678999999999999887654
No 181
>4gde_A UDP-galactopyranose mutase; flavin adenine dinucleotide binding, nucleotide binding, MUT isomerase; HET: FDA; 2.20A {Aspergillus fumigatus} PDB: 3ute_A* 3utg_A* 3uth_A* 4gdc_A* 4gdd_A* 3utf_A* 3ukh_A* 3ukf_A* 3uka_A* 3ukl_A* 3ukk_A* 3ukq_A* 3ukp_A*
Probab=98.44 E-value=8.5e-08 Score=97.18 Aligned_cols=41 Identities=34% Similarity=0.445 Sum_probs=38.0
Q ss_pred CCcEEEECCChHHHHHHHHHHH-CCCeEEEEecCCCCCceee
Q 011787 43 ENDVVVIGGGPGGYVAAIKAAQ-LGLKTTCIEKRGALGGTCL 83 (477)
Q Consensus 43 ~~dvvIIGgG~AGl~aA~~l~~-~g~~V~lie~~~~~GG~~~ 83 (477)
++||+|||||++||+||+.|++ .|++|+|+|+++.+||.|.
T Consensus 10 ~~DVvIIGaGisGLsaA~~L~k~~G~~V~VlE~~~~~GG~~~ 51 (513)
T 4gde_A 10 SVDVLVIGAGPTGLGAAKRLNQIDGPSWMIVDSNETPGGLAS 51 (513)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHCCSCEEEEESSSSCCGGGC
T ss_pred CCCEEEECCcHHHHHHHHHHHhhCCCCEEEEECCCCCcCCee
Confidence 5899999999999999999987 5999999999999999764
No 182
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=98.41 E-value=2e-06 Score=81.55 Aligned_cols=99 Identities=20% Similarity=0.236 Sum_probs=76.7
Q ss_pred CeeEEEcccHHHHHHHHHHHHcCCcEEEEEeCCC-----------cCCCC-----CHHHHHHHHHHHHhcCcEEEeCceE
Q 011787 215 KKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAAD-----------IVPSM-----DGEIRKQFQRSLEKQKMKFMLKTKV 278 (477)
Q Consensus 215 ~~v~IiG~G~~g~e~a~~l~~~g~~Vtli~~~~~-----------~~~~~-----~~~~~~~~~~~l~~~gv~~~~~~~v 278 (477)
.+++|||+|+.|+.+|..|++.|.+|+++++... ..+.+ ..++.+.+.+.+++.|++++. .++
T Consensus 9 ~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~gv~~~~-~~v 87 (325)
T 2q7v_A 9 YDVVIIGGGPAGLTAAIYTGRAQLSTLILEKGMPGGQIAWSEEVENFPGFPEPIAGMELAQRMHQQAEKFGAKVEM-DEV 87 (325)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEESSCTTGGGGGCSCBCCSTTCSSCBCHHHHHHHHHHHHHHTTCEEEE-CCE
T ss_pred CCEEEECCCHHHHHHHHHHHHcCCcEEEEeCCCCCcccccccccccCCCCCCCCCHHHHHHHHHHHHHHcCCEEEe-eeE
Confidence 5799999999999999999999999999998731 01222 235667777888889999987 688
Q ss_pred EEEEEc--CCe-EEEEEeecCCCceEEEEcCEEEEeecCCCCCC
Q 011787 279 VGVDLS--GDG-VKLTLEPAAGGEKTILEADVVLVSAGRTPFTA 319 (477)
Q Consensus 279 ~~i~~~--~~~-~~v~~~~~~~~~~~~i~~D~vi~a~G~~p~~~ 319 (477)
.+++.+ ++. +.+.+. ++.++.+|.+|+|+|..|+..
T Consensus 88 ~~i~~~~~~~~~~~v~~~-----~g~~~~~~~vv~AtG~~~~~~ 126 (325)
T 2q7v_A 88 QGVQHDATSHPYPFTVRG-----YNGEYRAKAVILATGADPRKL 126 (325)
T ss_dssp EEEEECTTSSSCCEEEEE-----SSCEEEEEEEEECCCEEECCC
T ss_pred EEEEeccCCCceEEEEEC-----CCCEEEeCEEEECcCCCcCCC
Confidence 888776 443 455443 456899999999999988654
No 183
>2gqf_A Hypothetical protein HI0933; structural genomics, FAD-utilizing protein, flavoprotein, PS protein structure initiative; HET: FAD; 2.70A {Haemophilus influenzae} SCOP: c.3.1.8 e.74.1.1
Probab=98.39 E-value=2.1e-06 Score=83.75 Aligned_cols=97 Identities=23% Similarity=0.315 Sum_probs=76.6
Q ss_pred CeeEEEcccHHHHHHHHHHHHcCCcEEEEEeCCCcCC-----------------C-------------------------
Q 011787 215 KKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIVP-----------------S------------------------- 252 (477)
Q Consensus 215 ~~v~IiG~G~~g~e~a~~l~~~g~~Vtli~~~~~~~~-----------------~------------------------- 252 (477)
.+|+|||+|+.|+.+|..+++.|.+|+++++.+.+.. .
T Consensus 5 ~dViIIGgG~aGl~aA~~la~~G~~V~vlEk~~~~g~~~~~sggg~cn~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 84 (401)
T 2gqf_A 5 SENIIIGAGAAGLFCAAQLAKLGKSVTVFDNGKKIGRKILMSGGGFCNFTNLEVTPAHYLSQNPHFVKSALARYTNWDFI 84 (401)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHHHGGGGTCCCEESSCCGGGEECSCTTSTHHHHHHSCHHHHH
T ss_pred CCEEEECCcHHHHHHHHHHHhCCCCEEEEeCCCCCchhcEEcCCCeEEccCCccCHHHhccCCHHHHHHHHHhCCHHHHH
Confidence 3699999999999999999999999999998764310 0
Q ss_pred ----------------------CCHHHHHHHHHHHHhcCcEEEeCceEEEEEEc----CCeEEEEEeecCCCceEEEEcC
Q 011787 253 ----------------------MDGEIRKQFQRSLEKQKMKFMLKTKVVGVDLS----GDGVKLTLEPAAGGEKTILEAD 306 (477)
Q Consensus 253 ----------------------~~~~~~~~~~~~l~~~gv~~~~~~~v~~i~~~----~~~~~v~~~~~~~~~~~~i~~D 306 (477)
...++.+.+.+.+++.|++++++++|+++..+ ++++.+++. ++ ++.+|
T Consensus 85 ~~~~~~Gi~~~~~~~g~~~p~~~~~~l~~~L~~~~~~~Gv~i~~~~~v~~i~~~~~g~~~~~~v~~~-----~g-~i~ad 158 (401)
T 2gqf_A 85 SLVAEQGITYHEKELGQLFCDEGAEQIVEMLKSECDKYGAKILLRSEVSQVERIQNDEKVRFVLQVN-----ST-QWQCK 158 (401)
T ss_dssp HHHHHTTCCEEECSTTEEEETTCTHHHHHHHHHHHHHHTCEEECSCCEEEEEECCSCSSCCEEEEET-----TE-EEEES
T ss_pred HHHHhCCCceEECcCCEEccCCCHHHHHHHHHHHHHHCCCEEEeCCEEEEEEcccCcCCCeEEEEEC-----CC-EEECC
Confidence 12344556777788889999999999999866 555655542 33 79999
Q ss_pred EEEEeecCCCC
Q 011787 307 VVLVSAGRTPF 317 (477)
Q Consensus 307 ~vi~a~G~~p~ 317 (477)
.||+|+|..+.
T Consensus 159 ~VVlAtG~~s~ 169 (401)
T 2gqf_A 159 NLIVATGGLSM 169 (401)
T ss_dssp EEEECCCCSSC
T ss_pred EEEECCCCccC
Confidence 99999998884
No 184
>1v0j_A UDP-galactopyranose mutase; flavoprotein, isomerase; HET: FAD BCN; 2.25A {Mycobacterium tuberculosis}
Probab=98.38 E-value=2.2e-07 Score=90.85 Aligned_cols=46 Identities=24% Similarity=0.374 Sum_probs=41.6
Q ss_pred CCCCCcEEEECCChHHHHHHHHHHHC-CCeEEEEecCCCCCceeecc
Q 011787 40 ASDENDVVVIGGGPGGYVAAIKAAQL-GLKTTCIEKRGALGGTCLNV 85 (477)
Q Consensus 40 ~~~~~dvvIIGgG~AGl~aA~~l~~~-g~~V~lie~~~~~GG~~~~~ 85 (477)
|+.++||+|||||++|++||..|++. |.+|+|+|+++.+||.|...
T Consensus 4 m~~~~~v~IiGaG~~Gl~aA~~L~~~~g~~v~v~E~~~~~GG~~~~~ 50 (399)
T 1v0j_A 4 MTARFDLFVVGSGFFGLTIAERVATQLDKRVLVLERRPHIGGNAYSE 50 (399)
T ss_dssp CCCSCSEEEECCSHHHHHHHHHHHHHSCCCEEEECSSSSSSGGGCEE
T ss_pred ccccCCEEEECCCHHHHHHHHHHHHhCCCCEEEEeCCCCCCCeeeec
Confidence 44578999999999999999999998 99999999999999987543
No 185
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=98.38 E-value=2.9e-06 Score=81.90 Aligned_cols=97 Identities=21% Similarity=0.351 Sum_probs=75.2
Q ss_pred CeeEEEcccHHHHHHHHHHHHcCC-cEEEEEeCC------C------c-CCC----------------------------
Q 011787 215 KKLVVIGAGYIGLEMGSVWARLGS-EVTVVEFAA------D------I-VPS---------------------------- 252 (477)
Q Consensus 215 ~~v~IiG~G~~g~e~a~~l~~~g~-~Vtli~~~~------~------~-~~~---------------------------- 252 (477)
.+|+|||+|+.|+.+|..|++.|. +|+++++.+ . + .+.
T Consensus 5 ~~vvIIGaG~aGl~aA~~l~~~g~~~v~lie~~~~Gg~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 84 (369)
T 3d1c_A 5 HKVAIIGAGAAGIGMAITLKDFGITDVIILEKGTVGHSFKHWPKSTRTITPSFTSNGFGMPDMNAISMDTSPAFTFNEEH 84 (369)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCCEEEECSSSTTHHHHTSCTTCBCSSCCCCCGGGTCCCTTCSSTTCCHHHHHCCSS
T ss_pred CcEEEECcCHHHHHHHHHHHHcCCCcEEEEecCCCCCccccCcccccccCcchhcccCCchhhhhccccccccccccccC
Confidence 469999999999999999999999 999999875 0 0 000
Q ss_pred CC-HHHHHHHHHHHHhcCcEEEeCceEEEEEEcCCeEEEEEeecCCCceEEEEcCEEEEeecCCCC
Q 011787 253 MD-GEIRKQFQRSLEKQKMKFMLKTKVVGVDLSGDGVKLTLEPAAGGEKTILEADVVLVSAGRTPF 317 (477)
Q Consensus 253 ~~-~~~~~~~~~~l~~~gv~~~~~~~v~~i~~~~~~~~v~~~~~~~~~~~~i~~D~vi~a~G~~p~ 317 (477)
.+ .++...+.+.+++.|++++++++|.+++.+++.+.+.+. ++ ++.+|.||+|+|..+.
T Consensus 85 ~~~~~~~~~l~~~~~~~gv~i~~~~~v~~i~~~~~~~~v~~~-----~g-~~~~d~vVlAtG~~~~ 144 (369)
T 3d1c_A 85 ISGETYAEYLQVVANHYELNIFENTVVTNISADDAYYTIATT-----TE-TYHADYIFVATGDYNF 144 (369)
T ss_dssp CBHHHHHHHHHHHHHHTTCEEECSCCEEEEEECSSSEEEEES-----SC-CEEEEEEEECCCSTTS
T ss_pred CCHHHHHHHHHHHHHHcCCeEEeCCEEEEEEECCCeEEEEeC-----CC-EEEeCEEEECCCCCCc
Confidence 01 234556677778889999999999999877666666653 22 5899999999998765
No 186
>2bcg_G Secretory pathway GDP dissociation inhibitor; RABGTPase, geranylgeranylation, vesicular transport, protein transport; HET: GDP GER; 1.48A {Saccharomyces cerevisiae} SCOP: c.3.1.3 c.3.1.3 d.16.1.6 PDB: 1ukv_G* 3cpi_G 3cph_G 3cpj_G*
Probab=98.37 E-value=2.7e-07 Score=91.82 Aligned_cols=45 Identities=24% Similarity=0.338 Sum_probs=41.1
Q ss_pred CCCCCcEEEECCChHHHHHHHHHHHCCCeEEEEecCCCCCceeec
Q 011787 40 ASDENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGALGGTCLN 84 (477)
Q Consensus 40 ~~~~~dvvIIGgG~AGl~aA~~l~~~g~~V~lie~~~~~GG~~~~ 84 (477)
|+..+||+|||||++|++||..|++.|++|+|+|+++.+||.+..
T Consensus 8 ~~~~~dvvVIGaG~~GL~aA~~La~~G~~V~vlE~~~~~GG~~~t 52 (453)
T 2bcg_G 8 IDTDYDVIVLGTGITECILSGLLSVDGKKVLHIDKQDHYGGEAAS 52 (453)
T ss_dssp CCCBCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCGGGCE
T ss_pred ccccCCEEEECcCHHHHHHHHHHHHCCCeEEEEeCCCCCCccccc
Confidence 445689999999999999999999999999999999999997654
No 187
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=98.37 E-value=1.7e-06 Score=81.41 Aligned_cols=99 Identities=24% Similarity=0.277 Sum_probs=77.2
Q ss_pred CCeeEEEcccHHHHHHHHHHHHcCCcEEE-EEeCCCc------------CCCCC-----HHHHHHHHHHHHhcCcEEEeC
Q 011787 214 PKKLVVIGAGYIGLEMGSVWARLGSEVTV-VEFAADI------------VPSMD-----GEIRKQFQRSLEKQKMKFMLK 275 (477)
Q Consensus 214 ~~~v~IiG~G~~g~e~a~~l~~~g~~Vtl-i~~~~~~------------~~~~~-----~~~~~~~~~~l~~~gv~~~~~ 275 (477)
..+|+|||+|+.|+.+|..|++.|.+|++ +++. .+ .|.++ .++...+.+.+++.|++++.+
T Consensus 4 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~li~e~~-~~gG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 82 (315)
T 3r9u_A 4 MLDVAIIGGGPAGLSAGLYATRGGLKNVVMFEKG-MPGGQITSSSEIENYPGVAQVMDGISFMAPWSEQCMRFGLKHEMV 82 (315)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHTCSCEEEECSS-STTGGGGGCSCBCCSTTCCSCBCHHHHHHHHHHHHTTTCCEEECC
T ss_pred CceEEEECCCHHHHHHHHHHHHCCCCeEEEEeCC-CCCceeeeeceeccCCCCCCCCCHHHHHHHHHHHHHHcCcEEEEE
Confidence 35899999999999999999999999999 8873 21 12223 577788888889999999987
Q ss_pred ceEEEEEEcC--CeEEEEEeecCCCceEEEEcCEEEEeecCCCCCCC
Q 011787 276 TKVVGVDLSG--DGVKLTLEPAAGGEKTILEADVVLVSAGRTPFTAG 320 (477)
Q Consensus 276 ~~v~~i~~~~--~~~~v~~~~~~~~~~~~i~~D~vi~a~G~~p~~~~ 320 (477)
++.++ .++ +.+.+.+.. ++ ++.+|.+|+|+|..|+...
T Consensus 83 -~v~~i-~~~~~~~~~v~~~~----~~-~~~~d~lvlAtG~~~~~~~ 122 (315)
T 3r9u_A 83 -GVEQI-LKNSDGSFTIKLEG----GK-TELAKAVIVCTGSAPKKAG 122 (315)
T ss_dssp -CEEEE-EECTTSCEEEEETT----SC-EEEEEEEEECCCEEECCCC
T ss_pred -EEEEE-ecCCCCcEEEEEec----CC-EEEeCEEEEeeCCCCCCCC
Confidence 88888 665 566643431 33 8999999999999887643
No 188
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A*
Probab=98.36 E-value=2.5e-06 Score=82.75 Aligned_cols=97 Identities=20% Similarity=0.323 Sum_probs=77.4
Q ss_pred CCeeEEEcccHHHHHHHHHHHHcCCcEEEEEeCCCcCCC-----------------------------------------
Q 011787 214 PKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIVPS----------------------------------------- 252 (477)
Q Consensus 214 ~~~v~IiG~G~~g~e~a~~l~~~g~~Vtli~~~~~~~~~----------------------------------------- 252 (477)
..+|+|||+|+.|+.+|..|++.|.+|+++++.+.+...
T Consensus 11 ~~dVvIVGaG~aGl~~A~~L~~~G~~v~viE~~~~~~~~~~~~~l~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~g~~ 90 (379)
T 3alj_A 11 TRRAEVAGGGFAGLTAAIALKQNGWDVRLHEKSSELRAFGAGIYLWHNGLRVLEGLGALDDVLQGSHTPPTYETWMHNKS 90 (379)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSCCCCSSEEEEEHHHHHHHHHTTCHHHHHTTCBCCSCEEEEETTEE
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCCEEEEecCCCCCCCCceEEeCccHHHHHHHcCCHHHHHhhCCCccceEEEeCCce
Confidence 468999999999999999999999999999987654210
Q ss_pred ---CC-----------HHHHHHHHHHHHhcCcEEEeCceEEEEEEcCCeEEEEEeecCCCceEEEEcCEEEEeecCCCCC
Q 011787 253 ---MD-----------GEIRKQFQRSLEKQKMKFMLKTKVVGVDLSGDGVKLTLEPAAGGEKTILEADVVLVSAGRTPFT 318 (477)
Q Consensus 253 ---~~-----------~~~~~~~~~~l~~~gv~~~~~~~v~~i~~~~~~~~v~~~~~~~~~~~~i~~D~vi~a~G~~p~~ 318 (477)
++ ..+.+.+.+.+++.|++++++++|++++. + + .+++. +++++.+|.||.|+|..+..
T Consensus 91 ~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~gv~i~~~~~v~~i~~-~-~-~v~~~-----~g~~~~ad~vV~AdG~~s~v 162 (379)
T 3alj_A 91 VSKETFNGLPWRIMTRSHLHDALVNRARALGVDISVNSEAVAADP-V-G-RLTLQ-----TGEVLEADLIVGADGVGSKV 162 (379)
T ss_dssp EEEECGGGCCEEEEEHHHHHHHHHHHHHHTTCEEESSCCEEEEET-T-T-EEEET-----TSCEEECSEEEECCCTTCHH
T ss_pred eeeccCCCCceEEECHHHHHHHHHHHHHhcCCEEEeCCEEEEEEe-C-C-EEEEC-----CCCEEEcCEEEECCCccHHH
Confidence 00 34466677788888999999999999976 3 3 55554 45689999999999988754
No 189
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=98.36 E-value=3e-07 Score=91.11 Aligned_cols=98 Identities=20% Similarity=0.354 Sum_probs=74.9
Q ss_pred CeeEEEcccHHHHHHHHHHHH---cCCcEEEEEeCCCc--CCC---------CCHHHHHHHHHHHHhcCcEEEeCceEEE
Q 011787 215 KKLVVIGAGYIGLEMGSVWAR---LGSEVTVVEFAADI--VPS---------MDGEIRKQFQRSLEKQKMKFMLKTKVVG 280 (477)
Q Consensus 215 ~~v~IiG~G~~g~e~a~~l~~---~g~~Vtli~~~~~~--~~~---------~~~~~~~~~~~~l~~~gv~~~~~~~v~~ 280 (477)
++|+|||||+.|+.+|..|++ .|.+|+++++.+.+ .+. ...++...+.+.+++.|++++ ..+++.
T Consensus 5 ~~vvIIGgG~aGl~aA~~L~~~~~~g~~Vtlie~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~gv~~~-~~~v~~ 83 (437)
T 3sx6_A 5 AHVVILGAGTGGMPAAYEMKEALGSGHEVTLISANDYFQFVPSNPWVGVGWKERDDIAFPIRHYVERKGIHFI-AQSAEQ 83 (437)
T ss_dssp CEEEEECCSTTHHHHHHHHHHHHGGGSEEEEECSSSEEECGGGHHHHHHTSSCHHHHEEECHHHHHTTTCEEE-CSCEEE
T ss_pred CcEEEECCcHHHHHHHHHHhccCCCcCEEEEEeCCCCCcccCCccccccCccCHHHHHHHHHHHHHHCCCEEE-EeEEEE
Confidence 689999999999999999998 78999999988865 111 112333335667788899998 468999
Q ss_pred EEEcCCeEEEEEeecCCCceEEEEcCEEEEeecCCCCCCC
Q 011787 281 VDLSGDGVKLTLEPAAGGEKTILEADVVLVSAGRTPFTAG 320 (477)
Q Consensus 281 i~~~~~~~~v~~~~~~~~~~~~i~~D~vi~a~G~~p~~~~ 320 (477)
++.+++ .+++. +++++.+|.+|+|+|.+|+...
T Consensus 84 id~~~~--~V~~~-----~g~~i~~d~lviAtG~~~~~~~ 116 (437)
T 3sx6_A 84 IDAEAQ--NITLA-----DGNTVHYDYLMIATGPKLAFEN 116 (437)
T ss_dssp EETTTT--EEEET-----TSCEEECSEEEECCCCEECGGG
T ss_pred EEcCCC--EEEEC-----CCCEEECCEEEECCCCCcCccc
Confidence 976655 34443 4568999999999999987643
No 190
>1jnr_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 1.60A {Archaeoglobus fulgidus dsm 4304} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1jnz_A* 2fjb_A* 2fja_A* 2fjd_A* 2fje_A*
Probab=98.35 E-value=2.8e-06 Score=88.09 Aligned_cols=58 Identities=7% Similarity=0.059 Sum_probs=40.9
Q ss_pred HHHHHHHHHhc-Cc-EEEeCceEEEEEEcCC---eEE-EEEeecCCCceEEEEcCEEEEeecCC
Q 011787 258 RKQFQRSLEKQ-KM-KFMLKTKVVGVDLSGD---GVK-LTLEPAAGGEKTILEADVVLVSAGRT 315 (477)
Q Consensus 258 ~~~~~~~l~~~-gv-~~~~~~~v~~i~~~~~---~~~-v~~~~~~~~~~~~i~~D~vi~a~G~~ 315 (477)
...+.+.+++. || +++.++.++++..+++ ++. +.+.+..++....+.++.||+|+|-.
T Consensus 154 ~~~l~~~~~~~~gv~~i~~~~~v~~L~~~~~~~g~v~Gv~~~~~~~g~~~~i~A~~VVlAtGG~ 217 (643)
T 1jnr_A 154 KPIIAEAAKMAVGEENIYERVFIFELLKDNNDPNAVAGAVGFSVREPKFYVFKAKAVILATGGA 217 (643)
T ss_dssp HHHHHHHHHHHHCGGGEECSEEEEEEEECTTCTTBEEEEEEEESSSSCEEEEECSEEEECCCCB
T ss_pred HHHHHHHHHhcCCCcEEEecCEEEEEEEcCCccceeEEEEEEEecCCcEEEEEcCEEEECCCcc
Confidence 34455566666 99 9999999999987665 554 44333334444579999999999943
No 191
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=98.35 E-value=1.5e-06 Score=81.61 Aligned_cols=99 Identities=12% Similarity=0.166 Sum_probs=76.0
Q ss_pred eeEEEcccHHHHHHHHHHHHcCCcEEEEEeCC--CcC-----C---C----CCHHHHHHHHHHHHhcCcEEEeCceEEEE
Q 011787 216 KLVVIGAGYIGLEMGSVWARLGSEVTVVEFAA--DIV-----P---S----MDGEIRKQFQRSLEKQKMKFMLKTKVVGV 281 (477)
Q Consensus 216 ~v~IiG~G~~g~e~a~~l~~~g~~Vtli~~~~--~~~-----~---~----~~~~~~~~~~~~l~~~gv~~~~~~~v~~i 281 (477)
+++|||+|+.|+.+|..|++.|.+|+++++.. .+. + . ..+++.+.+.+.+++.|++++.+++++.+
T Consensus 3 dvvIIG~G~aGl~aA~~l~~~g~~v~li~~~~gG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~v~~i 82 (310)
T 1fl2_A 3 DVLIVGSGPAGAAAAIYSARKGIRTGLMGERFGGQILDTVDIENYISVPKTEGQKLAGALKVHVDEYDVDVIDSQSASKL 82 (310)
T ss_dssp EEEEECCSHHHHHHHHHHHTTTCCEEEECSSTTGGGGGCCEECCBTTBSSEEHHHHHHHHHHHHHTSCEEEECSCCEEEE
T ss_pred CEEEECcCHHHHHHHHHHHHCCCcEEEEeCCCCceeccccccccccCcCCCCHHHHHHHHHHHHHHcCCeEEccCEEEEE
Confidence 68999999999999999999999999996431 000 0 0 12466777888888899999999999999
Q ss_pred EEcC---CeEEEEEeecCCCceEEEEcCEEEEeecCCCCCC
Q 011787 282 DLSG---DGVKLTLEPAAGGEKTILEADVVLVSAGRTPFTA 319 (477)
Q Consensus 282 ~~~~---~~~~v~~~~~~~~~~~~i~~D~vi~a~G~~p~~~ 319 (477)
+.+. +...+.+. ++.++.+|.+|+|+|..|...
T Consensus 83 ~~~~~~~~~~~v~~~-----~g~~~~~~~lv~AtG~~~~~~ 118 (310)
T 1fl2_A 83 IPAAVEGGLHQIETA-----SGAVLKARSIIVATGAKWRNM 118 (310)
T ss_dssp ECCSSTTCCEEEEET-----TSCEEEEEEEEECCCEEECCC
T ss_pred EecccCCceEEEEEC-----CCCEEEeCEEEECcCCCcCCC
Confidence 7542 24556554 446899999999999887654
No 192
>2e1m_A L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=98.34 E-value=4.1e-07 Score=87.35 Aligned_cols=49 Identities=20% Similarity=0.385 Sum_probs=43.2
Q ss_pred CCCCCCCCcEEEECCChHHHHHHHHHHHCCCeEEEEecC-CCCCceeecc
Q 011787 37 FASASDENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKR-GALGGTCLNV 85 (477)
Q Consensus 37 ~~~~~~~~dvvIIGgG~AGl~aA~~l~~~g~~V~lie~~-~~~GG~~~~~ 85 (477)
.+++...+||+|||||++|++||+.|++.|++|+|+|++ +.+||.|...
T Consensus 38 ~~~~~~~~~V~IIGAGiaGL~aA~~L~~~G~~V~VlE~~~~~vGGr~~t~ 87 (376)
T 2e1m_A 38 LNPPGPPKRILIVGAGIAGLVAGDLLTRAGHDVTILEANANRVGGRIKTF 87 (376)
T ss_dssp SSSCCSCCEEEEECCBHHHHHHHHHHHHTSCEEEEECSCSSCCBTTCCEE
T ss_pred CCCCCCCceEEEECCCHHHHHHHHHHHHCCCcEEEEeccccccCCceeee
Confidence 344556789999999999999999999999999999999 9999987543
No 193
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=98.33 E-value=3.3e-07 Score=89.96 Aligned_cols=101 Identities=21% Similarity=0.256 Sum_probs=76.0
Q ss_pred CeeEEEcccHHHHHHHHHHHH---cCCcEEEEEeCCCcC--CC---------CCHHHHHHHHHHHHhcCcEEEeCceEEE
Q 011787 215 KKLVVIGAGYIGLEMGSVWAR---LGSEVTVVEFAADIV--PS---------MDGEIRKQFQRSLEKQKMKFMLKTKVVG 280 (477)
Q Consensus 215 ~~v~IiG~G~~g~e~a~~l~~---~g~~Vtli~~~~~~~--~~---------~~~~~~~~~~~~l~~~gv~~~~~~~v~~ 280 (477)
++|+|||||+.|+.+|..|++ .|.+|+++++++.+. +. ...++...+.+.+++.|++++.+ +++.
T Consensus 2 ~~VvIIGgG~aGl~aA~~L~~~~~~g~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~-~v~~ 80 (409)
T 3h8l_A 2 TKVLVLGGRFGALTAAYTLKRLVGSKADVKVINKSRFSYFRPALPHVAIGVRDVDELKVDLSEALPEKGIQFQEG-TVEK 80 (409)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHHGGGSEEEEEESSSEEEECCSSCCCCSSCCCCCCEEEEHHHHTGGGTCEEEEC-EEEE
T ss_pred CeEEEECCCHHHHHHHHHHHhhCCCCCeEEEEeCCCCceeccchhhcccCCcCHHHHHHHHHHHHhhCCeEEEEe-eEEE
Confidence 579999999999999999999 899999999887541 11 12233444667778889999977 8999
Q ss_pred EEEcCCeEEEEEeecCCCceEEEEcCEEEEeecCCCCCC
Q 011787 281 VDLSGDGVKLTLEPAAGGEKTILEADVVLVSAGRTPFTA 319 (477)
Q Consensus 281 i~~~~~~~~v~~~~~~~~~~~~i~~D~vi~a~G~~p~~~ 319 (477)
++.++..+. +.+ ..+...++.+|.+|+|+|.+|+..
T Consensus 81 i~~~~~~V~--~~~-g~~~~~~~~~d~lViAtG~~~~~~ 116 (409)
T 3h8l_A 81 IDAKSSMVY--YTK-PDGSMAEEEYDYVIVGIGAHLATE 116 (409)
T ss_dssp EETTTTEEE--EEC-TTSCEEEEECSEEEECCCCEECGG
T ss_pred EeCCCCEEE--Ecc-CCcccceeeCCEEEECCCCCcCcc
Confidence 976655444 332 122335699999999999998764
No 194
>2pyx_A Tryptophan halogenase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative biosynthetic protein; HET: MSE TLA PG4; 1.50A {Shewanella frigidimarina}
Probab=98.32 E-value=1.4e-06 Score=88.47 Aligned_cols=35 Identities=29% Similarity=0.501 Sum_probs=32.5
Q ss_pred CCCcEEEECCChHHHHHHHHHHH------------CCCeEEEEecCC
Q 011787 42 DENDVVVIGGGPGGYVAAIKAAQ------------LGLKTTCIEKRG 76 (477)
Q Consensus 42 ~~~dvvIIGgG~AGl~aA~~l~~------------~g~~V~lie~~~ 76 (477)
..+||+|||||+||+++|..|++ .|.+|+|||+.+
T Consensus 6 ~~~dVvIVGgG~aGl~aA~~La~~~~~~~~~~~~~~G~~V~liE~~~ 52 (526)
T 2pyx_A 6 PITEIIIVGGGTAGWITAGLLAAEHNVDKGVLAHSPKLNITLIESPD 52 (526)
T ss_dssp CCCEEEEECCHHHHHHHHHHHHHHHHEETTEECSSCSCEEEEEECSS
T ss_pred CCCeEEEECCCHHHHHHHHHHHhhhccccccccCCCCCeEEEEeCCC
Confidence 45899999999999999999999 899999999865
No 195
>2x3n_A Probable FAD-dependent monooxygenase; oxidoreductase; HET: FAD; 1.75A {Pseudomonas aeruginosa}
Probab=98.32 E-value=2.1e-06 Score=83.90 Aligned_cols=99 Identities=19% Similarity=0.333 Sum_probs=78.1
Q ss_pred CeeEEEcccHHHHHHHHHHHHcCCcEEEEEeCCCcCC-------------------------------------------
Q 011787 215 KKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIVP------------------------------------------- 251 (477)
Q Consensus 215 ~~v~IiG~G~~g~e~a~~l~~~g~~Vtli~~~~~~~~------------------------------------------- 251 (477)
.+|+|||+|+.|+.+|..|++.|.+|+++++.+.+.+
T Consensus 7 ~dVvIVGaG~aGl~~A~~L~~~G~~V~viE~~~~~~~~~~~~~l~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~g~~ 86 (399)
T 2x3n_A 7 IDVLINGCGIGGAMLAYLLGRQGHRVVVVEQARRERAINGADLLKPAGIRVVEAAGLLAEVTRRGGRVRHELEVYHDGEL 86 (399)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCCC---CCCCEECHHHHHHHHHTTCHHHHHHTTCEEECEEEEEETTEE
T ss_pred CCEEEECcCHHHHHHHHHHHhCCCcEEEEeCCCCCCccCceeeECchHHHHHHHcCcHHHHHHhCCCcceeEEEeCCCCE
Confidence 4799999999999999999999999999998754300
Q ss_pred --C--------------C-CHHHHHHHHHHHHhc-CcEEEeCceEEEEEEcCCeE--EEEEeecCCCceEEEEcCEEEEe
Q 011787 252 --S--------------M-DGEIRKQFQRSLEKQ-KMKFMLKTKVVGVDLSGDGV--KLTLEPAAGGEKTILEADVVLVS 311 (477)
Q Consensus 252 --~--------------~-~~~~~~~~~~~l~~~-gv~~~~~~~v~~i~~~~~~~--~v~~~~~~~~~~~~i~~D~vi~a 311 (477)
. + ...+.+.+.+.+++. |++++++++|++++.+++++ .+++. +++++.+|.||.|
T Consensus 87 ~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~gv~i~~~~~v~~i~~~~~~v~g~v~~~-----~g~~~~ad~vV~A 161 (399)
T 2x3n_A 87 LRYFNYSSVDARGYFILMPCESLRRLVLEKIDGEATVEMLFETRIEAVQRDERHAIDQVRLN-----DGRVLRPRVVVGA 161 (399)
T ss_dssp EEEEETTSSCGGGCEEECCHHHHHHHHHHHHTTCTTEEEECSCCEEEEEECTTSCEEEEEET-----TSCEEEEEEEEEC
T ss_pred EEecchHHhcccCccccccHHHHHHHHHHHhhhcCCcEEEcCCEEEEEEEcCCceEEEEEEC-----CCCEEECCEEEEC
Confidence 0 0 024455666677776 99999999999998887777 67664 4458999999999
Q ss_pred ecCCCCC
Q 011787 312 AGRTPFT 318 (477)
Q Consensus 312 ~G~~p~~ 318 (477)
+|..+..
T Consensus 162 dG~~s~v 168 (399)
T 2x3n_A 162 DGIASYV 168 (399)
T ss_dssp CCTTCHH
T ss_pred CCCChHH
Confidence 9987753
No 196
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=98.31 E-value=1.4e-06 Score=86.56 Aligned_cols=102 Identities=22% Similarity=0.401 Sum_probs=77.7
Q ss_pred CeeEEEcccHHHHHHHHHHHHc--CCcEEEEEeCCCcC--CC-----CCH------HHHHHHHHHHHhcCcEEEeCceEE
Q 011787 215 KKLVVIGAGYIGLEMGSVWARL--GSEVTVVEFAADIV--PS-----MDG------EIRKQFQRSLEKQKMKFMLKTKVV 279 (477)
Q Consensus 215 ~~v~IiG~G~~g~e~a~~l~~~--g~~Vtli~~~~~~~--~~-----~~~------~~~~~~~~~l~~~gv~~~~~~~v~ 279 (477)
++|+|||||+.|+.+|..|++. |.+|+++++.+.+. +. +.. ++.....+.+++.|++++++++|+
T Consensus 3 ~~VvIIGgG~AGl~aA~~L~~~~~g~~V~vie~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~~~~~~V~ 82 (452)
T 3oc4_A 3 LKIVIIGASFAGISAAIASRKKYPQAEISLIDKQATVGYLSGGLSAYFNHTINELHEARYITEEELRRQKIQLLLNREVV 82 (452)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCSSSEEEEECSSSCCSSCCC----------------CCCCHHHHHHTTEEEECSCEEE
T ss_pred CCEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCCCcccCccchhhhcCCCCCHHHhhcCCHHHHHHCCCEEEECCEEE
Confidence 5799999999999999999998 88999999887642 10 001 111113456778899999999999
Q ss_pred EEEEcCCeEEEEEeecCCCceEEEEcCEEEEeecCCCCCCC
Q 011787 280 GVDLSGDGVKLTLEPAAGGEKTILEADVVLVSAGRTPFTAG 320 (477)
Q Consensus 280 ~i~~~~~~~~v~~~~~~~~~~~~i~~D~vi~a~G~~p~~~~ 320 (477)
+++.+++.+.+.. ..++.++.+|.+|+|+|.+|....
T Consensus 83 ~id~~~~~v~v~~----~~~~~~~~~d~lviAtG~~p~~p~ 119 (452)
T 3oc4_A 83 AMDVENQLIAWTR----KEEQQWYSYDKLILATGASQFSTQ 119 (452)
T ss_dssp EEETTTTEEEEEE----TTEEEEEECSEEEECCCCCBCCCC
T ss_pred EEECCCCEEEEEe----cCceEEEEcCEEEECCCcccCCCC
Confidence 9988777766652 125678999999999999987653
No 197
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=98.30 E-value=3.8e-06 Score=79.30 Aligned_cols=98 Identities=19% Similarity=0.237 Sum_probs=76.5
Q ss_pred CeeEEEcccHHHHHHHHHHHHcCCcEEEEEeCCC-----------cCCCC----CHHHHHHHHHHHHhcCcEEEeCceEE
Q 011787 215 KKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAAD-----------IVPSM----DGEIRKQFQRSLEKQKMKFMLKTKVV 279 (477)
Q Consensus 215 ~~v~IiG~G~~g~e~a~~l~~~g~~Vtli~~~~~-----------~~~~~----~~~~~~~~~~~l~~~gv~~~~~~~v~ 279 (477)
.+|+|||+|+.|+.+|..|++.|.+|+++++... ..+.+ ..++.+.+.+.+++.|++++. .++.
T Consensus 17 ~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~-~~v~ 95 (319)
T 3cty_A 17 FDVVIVGAGAAGFSAAVYAARSGFSVAILDKAVAGGLTAEAPLVENYLGFKSIVGSELAKLFADHAANYAKIREG-VEVR 95 (319)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSTTGGGGGCSCBCCBTTBSSBCHHHHHHHHHHHHHTTSEEEET-CCEE
T ss_pred CcEEEECcCHHHHHHHHHHHhCCCcEEEEeCCCCCccccccchhhhcCCCcccCHHHHHHHHHHHHHHcCCEEEE-eeEE
Confidence 5799999999999999999999999999998531 01211 245666777788888999987 7899
Q ss_pred EEEEcCCeEEEEEeecCCCceEEEEcCEEEEeecCCCCCC
Q 011787 280 GVDLSGDGVKLTLEPAAGGEKTILEADVVLVSAGRTPFTA 319 (477)
Q Consensus 280 ~i~~~~~~~~v~~~~~~~~~~~~i~~D~vi~a~G~~p~~~ 319 (477)
.++.+++.+.+.+ ++.++.+|.+|+|+|..|+..
T Consensus 96 ~i~~~~~~~~v~~------~~~~~~~~~li~AtG~~~~~~ 129 (319)
T 3cty_A 96 SIKKTQGGFDIET------NDDTYHAKYVIITTGTTHKHL 129 (319)
T ss_dssp EEEEETTEEEEEE------SSSEEEEEEEEECCCEEECCC
T ss_pred EEEEeCCEEEEEE------CCCEEEeCEEEECCCCCcccC
Confidence 9987777665554 235799999999999887654
No 198
>2r0c_A REBC; flavin adenine dinucleotide, monooxygenase, oxidoreductase; HET: FAD; 1.80A {Lechevalieria aerocolonigenes} PDB: 2r0g_A* 2r0p_A* 3ept_A*
Probab=98.30 E-value=3.3e-06 Score=86.09 Aligned_cols=37 Identities=30% Similarity=0.506 Sum_probs=34.3
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCeEEEEecCCCCC
Q 011787 43 ENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGALG 79 (477)
Q Consensus 43 ~~dvvIIGgG~AGl~aA~~l~~~g~~V~lie~~~~~G 79 (477)
++||+||||||+|+++|..|++.|.+|+||||....+
T Consensus 26 ~~dVlIVGaGpaGl~~A~~La~~G~~V~vlEr~~~~~ 62 (549)
T 2r0c_A 26 ETDVLILGGGPVGMALALDLAHRQVGHLVVEQTDGTI 62 (549)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCSCC
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCCC
Confidence 5799999999999999999999999999999987654
No 199
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=98.30 E-value=2.2e-06 Score=87.11 Aligned_cols=100 Identities=23% Similarity=0.312 Sum_probs=78.5
Q ss_pred CeeEEEcccHHHHHHHHHHHHcCCcEEEEEeCCCcC--------C-------------CC----------------CHHH
Q 011787 215 KKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIV--------P-------------SM----------------DGEI 257 (477)
Q Consensus 215 ~~v~IiG~G~~g~e~a~~l~~~g~~Vtli~~~~~~~--------~-------------~~----------------~~~~ 257 (477)
.+|+|||+|+.|+.+|..|++.|.+|+++++.+.+. | .+ .+++
T Consensus 22 ~dVvIIGaG~aGl~aA~~L~~~G~~v~iiE~~~~~GGtw~~~~ypg~~~dv~s~~y~~~f~~~~~~~~~~~~~~~~~~ei 101 (549)
T 4ap3_A 22 YDVVVVGAGIAGLYAIHRFRSQGLTVRAFEAASGVGGVWYWNRYPGARCDVESIDYSYSFSPELEQEWNWSEKYATQPEI 101 (549)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTHHHHCCCTTCBCSSCTTTSSCCSCHHHHHHCCCSSSSCBHHHH
T ss_pred CCEEEECchHHHHHHHHHHHhCCCCEEEEeCCCCCCCccccCCCCCceeCCCchhcccccccccccCCCCccCCCCHHHH
Confidence 579999999999999999999999999999865331 0 01 1356
Q ss_pred HHHHHHHHHhcCc--EEEeCceEEEEEEcCC--eEEEEEeecCCCceEEEEcCEEEEeec--CCCCCC
Q 011787 258 RKQFQRSLEKQKM--KFMLKTKVVGVDLSGD--GVKLTLEPAAGGEKTILEADVVLVSAG--RTPFTA 319 (477)
Q Consensus 258 ~~~~~~~l~~~gv--~~~~~~~v~~i~~~~~--~~~v~~~~~~~~~~~~i~~D~vi~a~G--~~p~~~ 319 (477)
.+.+.+..++.|+ ++.++++|++++.+++ .+.+++. +++++.+|.||+|+| ..|+..
T Consensus 102 ~~yl~~~~~~~g~~~~i~~~~~V~~i~~~~~~~~w~V~~~-----~G~~i~ad~lV~AtG~~s~p~~p 164 (549)
T 4ap3_A 102 LAYLEHVADRFDLRRDIRFDTRVTSAVLDEEGLRWTVRTD-----RGDEVSARFLVVAAGPLSNANTP 164 (549)
T ss_dssp HHHHHHHHHHTTCGGGEECSCCEEEEEEETTTTEEEEEET-----TCCEEEEEEEEECCCSEEECCCC
T ss_pred HHHHHHHHHHcCCCccEEECCEEEEEEEcCCCCEEEEEEC-----CCCEEEeCEEEECcCCCCCCCCC
Confidence 6777778888888 8899999999987665 5556654 556899999999999 566544
No 200
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.30 E-value=9.2e-07 Score=85.35 Aligned_cols=99 Identities=17% Similarity=0.166 Sum_probs=72.9
Q ss_pred CCCeeEEEcccHHHHHHHHHHHHcCCcEEEEEeCCCcCC---C--------CC-HHHHHHHHHHHHhcCcEEEeCceEEE
Q 011787 213 VPKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIVP---S--------MD-GEIRKQFQRSLEKQKMKFMLKTKVVG 280 (477)
Q Consensus 213 ~~~~v~IiG~G~~g~e~a~~l~~~g~~Vtli~~~~~~~~---~--------~~-~~~~~~~~~~l~~~gv~~~~~~~v~~ 280 (477)
.+.+++|||+|+.|+.+|..+++.| +|+++++.+.... . .+ .++.....+.+++.|++++.+++++.
T Consensus 7 ~~~~vvIIGgG~AGl~aA~~l~~~g-~V~lie~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~g~~v~~ 85 (367)
T 1xhc_A 7 HGSKVVIVGNGPGGFELAKQLSQTY-EVTVIDKEPVPYYSKPMLSHYIAGFIPRNRLFPYSLDWYRKRGIEIRLAEEAKL 85 (367)
T ss_dssp --CEEEEECCSHHHHHHHHHHTTTS-EEEEECSSSSCCCCSTTHHHHHTTSSCGGGGCSSCHHHHHHHTEEEECSCCEEE
T ss_pred CCCcEEEECCcHHHHHHHHHHhhcC-CEEEEECCCCCccccchhHHHHhCCCCHHHhccCCHHHHHhCCcEEEECCEEEE
Confidence 4688999999999999999999999 9999998775321 0 11 11112234566778999999999999
Q ss_pred EEEcCCeEEEEEeecCCCceEEEEcCEEEEeecCCCCCCC
Q 011787 281 VDLSGDGVKLTLEPAAGGEKTILEADVVLVSAGRTPFTAG 320 (477)
Q Consensus 281 i~~~~~~~~v~~~~~~~~~~~~i~~D~vi~a~G~~p~~~~ 320 (477)
++..... ++ . +++++.+|.+|+|||.+|+...
T Consensus 86 id~~~~~--V~-~-----~g~~~~~d~lViATGs~p~~p~ 117 (367)
T 1xhc_A 86 IDRGRKV--VI-T-----EKGEVPYDTLVLATGARAREPQ 117 (367)
T ss_dssp EETTTTE--EE-E-----SSCEEECSEEEECCCEEECCCC
T ss_pred EECCCCE--EE-E-----CCcEEECCEEEECCCCCCCCCC
Confidence 9765433 33 2 4568999999999999987653
No 201
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=98.30 E-value=3.3e-06 Score=79.69 Aligned_cols=99 Identities=16% Similarity=0.252 Sum_probs=77.3
Q ss_pred CeeEEEcccHHHHHHHHHHHHcCCcEEEEEeCCC-----------cCCCC-----CHHHHHHHHHHHHhcCcEEEeCceE
Q 011787 215 KKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAAD-----------IVPSM-----DGEIRKQFQRSLEKQKMKFMLKTKV 278 (477)
Q Consensus 215 ~~v~IiG~G~~g~e~a~~l~~~g~~Vtli~~~~~-----------~~~~~-----~~~~~~~~~~~l~~~gv~~~~~~~v 278 (477)
.+|+|||+|+.|+.+|..|++.|.+|+++++... ..+.+ .+++.+.+.+.+++.|++++.++ +
T Consensus 6 ~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-v 84 (320)
T 1trb_A 6 SKLLILGSGPAGYTAAVYAARANLQPVLITGMEKGGQLTTTTEVENWPGDPNDLTGPLLMERMHEHATKFETEIIFDH-I 84 (320)
T ss_dssp EEEEEECCSHHHHHHHHHHHTTTCCCEEECCSSTTGGGGGCSBCCCSTTCCSSCBHHHHHHHHHHHHHHTTCEEECCC-E
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCcEEEEccCCCCceEecchhhhhCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEee-e
Confidence 5799999999999999999999999999985421 01222 24667777788888999999886 8
Q ss_pred EEEEEcCCeEEEEEeecCCCceEEEEcCEEEEeecCCCCCCC
Q 011787 279 VGVDLSGDGVKLTLEPAAGGEKTILEADVVLVSAGRTPFTAG 320 (477)
Q Consensus 279 ~~i~~~~~~~~v~~~~~~~~~~~~i~~D~vi~a~G~~p~~~~ 320 (477)
..++.+++.+.+ +. ++.++.+|.+++|+|..|....
T Consensus 85 ~~i~~~~~~~~v-~~-----~~~~~~~~~lv~AtG~~~~~~~ 120 (320)
T 1trb_A 85 NKVDLQNRPFRL-NG-----DNGEYTCDALIIATGASARYLG 120 (320)
T ss_dssp EEEECSSSSEEE-EE-----SSCEEEEEEEEECCCEEECCCC
T ss_pred eEEEecCCEEEE-Ee-----CCCEEEcCEEEECCCCCcCCCC
Confidence 888877666666 33 4568999999999999886643
No 202
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=98.29 E-value=2.2e-06 Score=84.01 Aligned_cols=99 Identities=17% Similarity=0.330 Sum_probs=73.8
Q ss_pred CeeEEEcccHHHHHHHHHHHHcCCc--EEEEEeCCCcC---CCCCHHHH---------HHHHHHHHhcCcEEEeCceEEE
Q 011787 215 KKLVVIGAGYIGLEMGSVWARLGSE--VTVVEFAADIV---PSMDGEIR---------KQFQRSLEKQKMKFMLKTKVVG 280 (477)
Q Consensus 215 ~~v~IiG~G~~g~e~a~~l~~~g~~--Vtli~~~~~~~---~~~~~~~~---------~~~~~~l~~~gv~~~~~~~v~~ 280 (477)
++++|||+|+.|+.+|..|++.|.+ |+++++.+.+. +.+.+.+. ....+.+++.|++++.+++++.
T Consensus 3 ~~vvIIGaG~AGl~aA~~L~~~g~~~~V~li~~~~~~~y~~~~l~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~~~v~~ 82 (410)
T 3ef6_A 3 THVAIIGNGVGGFTTAQALRAEGFEGRISLIGDEPHLPYDRPSLSKAVLDGSLERPPILAEADWYGEARIDMLTGPEVTA 82 (410)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEEECSSSSSBCSGGGGTHHHHTSSSSCCBSSCTTHHHHTTCEEEESCCEEE
T ss_pred CCEEEEcccHHHHHHHHHHHccCcCCeEEEEECCCCCCcCCccccHHHhCCCCCHHHhcCCHHHHHHCCCEEEeCCEEEE
Confidence 5799999999999999999999987 99999877541 11111111 1123456778999999999999
Q ss_pred EEEcCCeEEEEEeecCCCceEEEEcCEEEEeecCCCCCCC
Q 011787 281 VDLSGDGVKLTLEPAAGGEKTILEADVVLVSAGRTPFTAG 320 (477)
Q Consensus 281 i~~~~~~~~v~~~~~~~~~~~~i~~D~vi~a~G~~p~~~~ 320 (477)
++..... +.+. +++++.+|.+++|+|.+|+...
T Consensus 83 id~~~~~--v~~~-----~g~~~~~d~lvlAtG~~p~~~~ 115 (410)
T 3ef6_A 83 LDVQTRT--ISLD-----DGTTLSADAIVIATGSRARTMA 115 (410)
T ss_dssp EETTTTE--EEET-----TSCEEECSEEEECCCEEECCCC
T ss_pred EECCCCE--EEEC-----CCCEEECCEEEEccCCcccCCC
Confidence 9766543 3333 5568999999999999887653
No 203
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=98.29 E-value=4.7e-06 Score=84.54 Aligned_cols=100 Identities=21% Similarity=0.231 Sum_probs=78.5
Q ss_pred CeeEEEcccHHHHHHHHHHH-HcCCcEEEEEeCCCcC--------CC-------------C----------------CHH
Q 011787 215 KKLVVIGAGYIGLEMGSVWA-RLGSEVTVVEFAADIV--------PS-------------M----------------DGE 256 (477)
Q Consensus 215 ~~v~IiG~G~~g~e~a~~l~-~~g~~Vtli~~~~~~~--------~~-------------~----------------~~~ 256 (477)
.+|+|||||+.|+.+|..|+ +.|.+|+++++.+.+. |. + .++
T Consensus 9 ~dVvIIGaG~aGl~aA~~L~~~~G~~v~viE~~~~~GGtw~~~~ypg~~~d~~s~~~~~~~~~~~~~~~~~~~~~~~~~e 88 (540)
T 3gwf_A 9 VDAVVIGAGFGGIYAVHKLHHELGLTTVGFDKADGPGGTWYWNRYPGALSDTESHLYRFSFDRDLLQESTWKTTYITQPE 88 (540)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCCEEEEESSSSSCTHHHHCCCTTCEEEEEGGGSSCCSCHHHHHHCCCSBSEEEHHH
T ss_pred CCEEEECcCHHHHHHHHHHHHcCCCCEEEEECCCCCCCcccccCCCCceecCCcceeeeccccccccCCCCcccCCCHHH
Confidence 47999999999999999999 9999999999876431 10 1 135
Q ss_pred HHHHHHHHHHhcCc--EEEeCceEEEEEEcCC--eEEEEEeecCCCceEEEEcCEEEEeecC--CCCCC
Q 011787 257 IRKQFQRSLEKQKM--KFMLKTKVVGVDLSGD--GVKLTLEPAAGGEKTILEADVVLVSAGR--TPFTA 319 (477)
Q Consensus 257 ~~~~~~~~l~~~gv--~~~~~~~v~~i~~~~~--~~~v~~~~~~~~~~~~i~~D~vi~a~G~--~p~~~ 319 (477)
+.+.+.+..++.|+ .+.++++|++++.+++ .+.+++. +++++.+|.||+|+|. .|+..
T Consensus 89 i~~~l~~~~~~~g~~~~i~~~~~V~~i~~~~~~~~~~V~~~-----~G~~i~ad~lV~AtG~~s~p~~p 152 (540)
T 3gwf_A 89 ILEYLEDVVDRFDLRRHFKFGTEVTSALYLDDENLWEVTTD-----HGEVYRAKYVVNAVGLLSAINFP 152 (540)
T ss_dssp HHHHHHHHHHHTTCGGGEEESCCEEEEEEETTTTEEEEEET-----TSCEEEEEEEEECCCSCCSBCCC
T ss_pred HHHHHHHHHHHcCCcceeEeccEEEEEEEeCCCCEEEEEEc-----CCCEEEeCEEEECCcccccCCCC
Confidence 66777778888888 8999999999987765 5566654 4568999999999994 56543
No 204
>3hdq_A UDP-galactopyranose mutase; substrate and inhibitor, isomerase; HET: GDU FAD; 2.36A {Deinococcus radiodurans} PDB: 3hdy_A* 3he3_A* 3mj4_A*
Probab=98.29 E-value=5.8e-07 Score=87.03 Aligned_cols=45 Identities=27% Similarity=0.480 Sum_probs=41.0
Q ss_pred CCCCCcEEEECCChHHHHHHHHHHHCCCeEEEEecCCCCCceeec
Q 011787 40 ASDENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGALGGTCLN 84 (477)
Q Consensus 40 ~~~~~dvvIIGgG~AGl~aA~~l~~~g~~V~lie~~~~~GG~~~~ 84 (477)
+...+||+|||||++|+++|..|++.|.+|+|+|+++.+||.|..
T Consensus 26 ~~~~~dv~IIGaG~aGl~aA~~l~~~g~~v~v~E~~~~~GG~~~~ 70 (397)
T 3hdq_A 26 ESKGFDYLIVGAGFAGSVLAERLASSGQRVLIVDRRPHIGGNAYD 70 (397)
T ss_dssp CCCCEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSSGGGCC
T ss_pred cCCCCCEEEECccHHHHHHHHHHHHCCCceEEEeccCCCCCccce
Confidence 345789999999999999999999999999999999999998753
No 205
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=98.28 E-value=3e-07 Score=90.85 Aligned_cols=97 Identities=21% Similarity=0.301 Sum_probs=71.0
Q ss_pred CCeeEEEcccHHHHHHHHHHHHcC--CcEEEEEeCCCcC--CCC--------C-HHHHHHHHHHHHhcCcEEEeCceEEE
Q 011787 214 PKKLVVIGAGYIGLEMGSVWARLG--SEVTVVEFAADIV--PSM--------D-GEIRKQFQRSLEKQKMKFMLKTKVVG 280 (477)
Q Consensus 214 ~~~v~IiG~G~~g~e~a~~l~~~g--~~Vtli~~~~~~~--~~~--------~-~~~~~~~~~~l~~~gv~~~~~~~v~~ 280 (477)
.|+|+|||||+.|+.+|..|++.+ .+||++++++.+. |.+ + .++...+.+.+++.||+++.+ +|++
T Consensus 2 ~K~VvIIGgG~aGl~aA~~L~~~~~~~~VtlI~~~~~~~~~p~l~~v~~g~~~~~~i~~~~~~~~~~~gv~~i~~-~v~~ 80 (430)
T 3hyw_A 2 AKHVVVIGGGVGGIATAYNLRNLMPDLKITLISDRPYFGFTPAFPHLAMGWRKFEDISVPLAPLLPKFNIEFINE-KAES 80 (430)
T ss_dssp CCEEEEECSSHHHHHHHHHHHHHCTTCEEEEECSSSEEECGGGHHHHHHTCSCGGGSEEESTTTGGGGTEEEECS-CEEE
T ss_pred CCcEEEECCCHHHHHHHHHHhccCcCCeEEEEcCCCCCccCccHHHHhcCCCCHHHhhhcHHHHHHHCCcEEEEe-EEEE
Confidence 478999999999999999999876 6899999887542 111 1 111112345567789999855 7999
Q ss_pred EEEcCCeEEEEEeecCCCceEEEEcCEEEEeecCCCCC
Q 011787 281 VDLSGDGVKLTLEPAAGGEKTILEADVVLVSAGRTPFT 318 (477)
Q Consensus 281 i~~~~~~~~v~~~~~~~~~~~~i~~D~vi~a~G~~p~~ 318 (477)
|+.+++.+. +. +++++++|.+|+|+|.++..
T Consensus 81 Id~~~~~V~--~~-----~g~~i~YD~LViAtG~~~~~ 111 (430)
T 3hyw_A 81 IDPDANTVT--TQ-----SGKKIEYDYLVIATGPKLVF 111 (430)
T ss_dssp EETTTTEEE--ET-----TCCEEECSEEEECCCCEEEC
T ss_pred EECCCCEEE--EC-----CCCEEECCEEEEeCCCCccC
Confidence 977666544 33 66789999999999987643
No 206
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=98.28 E-value=8.3e-06 Score=81.13 Aligned_cols=97 Identities=22% Similarity=0.356 Sum_probs=67.9
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCeEEEEecCCCCCceeeccCccCchhhhhhhHHHHHHHhhhhhCCccccccccChH
Q 011787 43 ENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSVEVDLP 122 (477)
Q Consensus 43 ~~dvvIIGgG~AGl~aA~~l~~~g~~V~lie~~~~~GG~~~~~~~~p~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 122 (477)
..+++|||||++|+.+|..|++.|.+|+|+|+.+.+. |. ..
T Consensus 167 ~~~vvIiGgG~~g~e~A~~l~~~g~~V~lv~~~~~~l---------~~-----~~------------------------- 207 (455)
T 2yqu_A 167 PKRLIVVGGGVIGLELGVVWHRLGAEVIVLEYMDRIL---------PT-----MD------------------------- 207 (455)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSC---------TT-----SC-------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCEEEEEecCCccc---------cc-----cC-------------------------
Confidence 3689999999999999999999999999999854321 10 00
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhCCeEEEEe-EEEEec--CCEEEEEecCCceEEEEecEEEEccCCCCCC
Q 011787 123 AMMAQKDKAVSNLTRGIEGLFKKNKVTYVKG-YGKFIS--PSEVSVDTIEGGNTVVKGKNIIIATGSDVKS 190 (477)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-~~~~~~--~~~~~v~~~~g~~~~i~~d~lvlAtG~~~~~ 190 (477)
..+.+.+.+.+++.+++++.+ .+..++ .+.+.+.+.+| .++.+|.||+|+|.+|..
T Consensus 208 ----------~~~~~~l~~~l~~~Gv~i~~~~~V~~i~~~~~~v~v~~~~g--~~i~~D~vv~A~G~~p~~ 266 (455)
T 2yqu_A 208 ----------LEVSRAAERVFKKQGLTIRTGVRVTAVVPEAKGARVELEGG--EVLEADRVLVAVGRRPYT 266 (455)
T ss_dssp ----------HHHHHHHHHHHHHHTCEEECSCCEEEEEEETTEEEEEETTS--CEEEESEEEECSCEEECC
T ss_pred ----------HHHHHHHHHHHHHCCCEEEECCEEEEEEEeCCEEEEEECCC--eEEEcCEEEECcCCCcCC
Confidence 001112234455568888876 344443 34566666666 679999999999998853
No 207
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=98.27 E-value=2.3e-06 Score=81.26 Aligned_cols=99 Identities=21% Similarity=0.274 Sum_probs=77.4
Q ss_pred CeeEEEcccHHHHHHHHHHHHcCCcEEEEEe----CCCc------------CCCC-----CHHHHHHHHHHHHhcCcEEE
Q 011787 215 KKLVVIGAGYIGLEMGSVWARLGSEVTVVEF----AADI------------VPSM-----DGEIRKQFQRSLEKQKMKFM 273 (477)
Q Consensus 215 ~~v~IiG~G~~g~e~a~~l~~~g~~Vtli~~----~~~~------------~~~~-----~~~~~~~~~~~l~~~gv~~~ 273 (477)
.+|+|||+|+.|+.+|..|++.|.+|+++++ ...+ .+.+ ..++...+.+.+++.|++++
T Consensus 9 ~~vvIIG~G~aGl~~A~~l~~~g~~v~lie~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~gv~~~ 88 (333)
T 1vdc_A 9 TRLCIVGSGPAAHTAAIYAARAELKPLLFEGWMANDIAPGGQLTTTTDVENFPGFPEGILGVELTDKFRKQSERFGTTIF 88 (333)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCCEEECCSSBTTBCTTCGGGGCSEECCSTTCTTCEEHHHHHHHHHHHHHHTTCEEE
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCeEEEEeccCccccCCCceeeeccccccCCCCccCCCHHHHHHHHHHHHHHCCCEEE
Confidence 5799999999999999999999999999997 2211 1122 23667777788888999999
Q ss_pred eCceEEEEEEcCCeEEEEEeecCCCceEEEEcCEEEEeecCCCCCCC
Q 011787 274 LKTKVVGVDLSGDGVKLTLEPAAGGEKTILEADVVLVSAGRTPFTAG 320 (477)
Q Consensus 274 ~~~~v~~i~~~~~~~~v~~~~~~~~~~~~i~~D~vi~a~G~~p~~~~ 320 (477)
.++ +..++..++.+.+++ ++.++.+|.+|+|+|..|....
T Consensus 89 ~~~-v~~i~~~~~~~~v~~------~~~~~~~~~vv~A~G~~~~~~~ 128 (333)
T 1vdc_A 89 TET-VTKVDFSSKPFKLFT------DSKAILADAVILAIGAVAKRLS 128 (333)
T ss_dssp CCC-CCEEECSSSSEEEEC------SSEEEEEEEEEECCCEEECCCC
T ss_pred EeE-EEEEEEcCCEEEEEE------CCcEEEcCEEEECCCCCcCCCC
Confidence 886 888887666666653 3468999999999999876543
No 208
>1s3e_A Amine oxidase [flavin-containing] B; human monoamine oxidase, inhibitor binding, rasagiline, enantioselectivity, oxidoreductase; HET: FAD RHP; 1.60A {Homo sapiens} SCOP: c.3.1.2 d.16.1.5 PDB: 1gos_A* 1oj9_A* 1ojb_A* 1ojc_A* 1ojd_A* 1s2q_A* 1s2y_A* 1oja_A* 1s3b_A* 2bk3_A* 2byb_A* 2c64_A* 2c65_A* 2c66_A* 2c67_A* 2c70_A* 2v5z_A* 2v60_A* 2v61_A* 2vrl_A* ...
Probab=98.27 E-value=4.9e-07 Score=91.76 Aligned_cols=43 Identities=37% Similarity=0.601 Sum_probs=39.5
Q ss_pred CCCcEEEECCChHHHHHHHHHHHCCCeEEEEecCCCCCceeec
Q 011787 42 DENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGALGGTCLN 84 (477)
Q Consensus 42 ~~~dvvIIGgG~AGl~aA~~l~~~g~~V~lie~~~~~GG~~~~ 84 (477)
.++||+|||||+||++||..|++.|++|+|+|+++.+||.+..
T Consensus 3 ~~~~vvIIGaG~aGL~aA~~L~~~G~~V~vlE~~~~~GGr~~t 45 (520)
T 1s3e_A 3 NKCDVVVVGGGISGMAAAKLLHDSGLNVVVLEARDRVGGRTYT 45 (520)
T ss_dssp CBCSEEEECCBHHHHHHHHHHHHTTCCEEEECSSSSSBTTCCE
T ss_pred CCceEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCCCCceee
Confidence 4579999999999999999999999999999999999997643
No 209
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=98.26 E-value=4.8e-06 Score=79.23 Aligned_cols=100 Identities=18% Similarity=0.184 Sum_probs=76.4
Q ss_pred CCeeEEEcccHHHHHHHHHHHHcCCcEEEEEeCCC-----------cCCCC-----CHHHHHHHHHHHHhcCcEEEeCce
Q 011787 214 PKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAAD-----------IVPSM-----DGEIRKQFQRSLEKQKMKFMLKTK 277 (477)
Q Consensus 214 ~~~v~IiG~G~~g~e~a~~l~~~g~~Vtli~~~~~-----------~~~~~-----~~~~~~~~~~~l~~~gv~~~~~~~ 277 (477)
..+++|||+|+.|+.+|..|++.|.+|+++++... ..+.+ .+++...+.+.+++.|++++.++
T Consensus 14 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~~~~~~- 92 (335)
T 2a87_A 14 VRDVIVIGSGPAGYTAALYAARAQLAPLVFEGTSFGGALMTTTDVENYPGFRNGITGPELMDEMREQALRFGADLRMED- 92 (335)
T ss_dssp CEEEEEECCHHHHHHHHHHHHHTTCCCEEECCSSCSCGGGSCSCBCCSTTCTTCBCHHHHHHHHHHHHHHTTCEEECCC-
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEEecCCCCCceeccchhhhcCCCCCCCCHHHHHHHHHHHHHHcCCEEEEee-
Confidence 46799999999999999999999999999985421 01222 24667777788888899999886
Q ss_pred EEEEEEcCCeEEE-EEeecCCCceEEEEcCEEEEeecCCCCCCC
Q 011787 278 VVGVDLSGDGVKL-TLEPAAGGEKTILEADVVLVSAGRTPFTAG 320 (477)
Q Consensus 278 v~~i~~~~~~~~v-~~~~~~~~~~~~i~~D~vi~a~G~~p~~~~ 320 (477)
+..++. ++.+.+ .+. ++.++.+|.+|+|+|..|....
T Consensus 93 v~~i~~-~~~~~v~~~~-----~g~~~~~d~lviAtG~~~~~~~ 130 (335)
T 2a87_A 93 VESVSL-HGPLKSVVTA-----DGQTHRARAVILAMGAAARYLQ 130 (335)
T ss_dssp EEEEEC-SSSSEEEEET-----TSCEEEEEEEEECCCEEECCCC
T ss_pred EEEEEe-CCcEEEEEeC-----CCCEEEeCEEEECCCCCccCCC
Confidence 888876 444455 443 4568999999999999886543
No 210
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=98.26 E-value=4.4e-06 Score=81.76 Aligned_cols=35 Identities=34% Similarity=0.430 Sum_probs=32.4
Q ss_pred CcEEEECCChHHHHHHHHHHHCCCeEEEEecCCCC
Q 011787 44 NDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGAL 78 (477)
Q Consensus 44 ~dvvIIGgG~AGl~aA~~l~~~g~~V~lie~~~~~ 78 (477)
++|+||||||||+++|..|++.|++|+|+||.+.+
T Consensus 2 m~V~IVGaGpaGl~~A~~L~~~G~~v~v~Er~~~~ 36 (412)
T 4hb9_A 2 MHVGIIGAGIGGTCLAHGLRKHGIKVTIYERNSAA 36 (412)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCSS
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCCEEEEecCCCC
Confidence 58999999999999999999999999999997644
No 211
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=98.25 E-value=3.7e-06 Score=82.08 Aligned_cols=100 Identities=18% Similarity=0.293 Sum_probs=75.4
Q ss_pred CCeeEEEcccHHHHHHHHHHHHcCCcEEEEEeCCCcCCC------CCHHHHHH---------------------------
Q 011787 214 PKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIVPS------MDGEIRKQ--------------------------- 260 (477)
Q Consensus 214 ~~~v~IiG~G~~g~e~a~~l~~~g~~Vtli~~~~~~~~~------~~~~~~~~--------------------------- 260 (477)
..+|+|||||+.|+.+|..|++.|.+|+++++.+..... +.+...+.
T Consensus 5 ~~~V~IVGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~~~~~~g~~l~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~g~ 84 (397)
T 2vou_A 5 TDRIAVVGGSISGLTAALMLRDAGVDVDVYERSPQPLSGFGTGIVVQPELVHYLLEQGVELDSISVPSSSMEYVDALTGE 84 (397)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCCCCSCEEECCHHHHHHHHHTTCCGGGTCBCCCEEEEEETTTCC
T ss_pred CCcEEEECCCHHHHHHHHHHHhCCCCEEEEecCCCCCCccccccccChhHHHHHHHcCCccccccccccceEEEecCCCC
Confidence 468999999999999999999999999999987654211 22222211
Q ss_pred ----------------HHHHHHh--cCcEEEeCceEEEEEEcCCeEEEEEeecCCCceEEEEcCEEEEeecCCCCC
Q 011787 261 ----------------FQRSLEK--QKMKFMLKTKVVGVDLSGDGVKLTLEPAAGGEKTILEADVVLVSAGRTPFT 318 (477)
Q Consensus 261 ----------------~~~~l~~--~gv~~~~~~~v~~i~~~~~~~~v~~~~~~~~~~~~i~~D~vi~a~G~~p~~ 318 (477)
+.+.|.+ .|++++++++|++++.+++++.+++. +++++.+|+||.|.|..+..
T Consensus 85 ~~~~~~~~~~~~~~~~l~~~L~~~~~~~~i~~~~~v~~i~~~~~~v~v~~~-----~g~~~~ad~vV~AdG~~S~v 155 (397)
T 2vou_A 85 RVGSVPADWRFTSYDSIYGGLYELFGPERYHTSKCLVGLSQDSETVQMRFS-----DGTKAEANWVIGADGGASVV 155 (397)
T ss_dssp EEEEEECCCCEEEHHHHHHHHHHHHCSTTEETTCCEEEEEECSSCEEEEET-----TSCEEEESEEEECCCTTCHH
T ss_pred ccccccCcccccCHHHHHHHHHHhCCCcEEEcCCEEEEEEecCCEEEEEEC-----CCCEEECCEEEECCCcchhH
Confidence 2222222 37889999999999988888887765 45689999999999987653
No 212
>3nrn_A Uncharacterized protein PF1083; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: AMP; 2.10A {Pyrococcus furiosus}
Probab=98.25 E-value=6.7e-07 Score=88.13 Aligned_cols=41 Identities=34% Similarity=0.520 Sum_probs=38.2
Q ss_pred CcEEEECCChHHHHHHHHHHHCCCeEEEEecCCCCCceeec
Q 011787 44 NDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGALGGTCLN 84 (477)
Q Consensus 44 ~dvvIIGgG~AGl~aA~~l~~~g~~V~lie~~~~~GG~~~~ 84 (477)
+||+|||||++|++||++|++.|++|+|+|+++.+||.+..
T Consensus 1 ~dVvVIGaGiaGLsaA~~La~~G~~V~vlE~~~~~GG~~~~ 41 (421)
T 3nrn_A 1 MRAVVVGAGLGGLLAGAFLARNGHEIIVLEKSAMIGGRFTN 41 (421)
T ss_dssp CEEEEESCSHHHHHHHHHHHHTTCEEEEECSSSSSCTTSSE
T ss_pred CcEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCCCceeEE
Confidence 48999999999999999999999999999999999997654
No 213
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=98.25 E-value=5.3e-07 Score=89.15 Aligned_cols=97 Identities=19% Similarity=0.230 Sum_probs=72.4
Q ss_pred CeeEEEcccHHHHHHHHHHHH--cCCcEEEEEeCCCcCCC-----------CCHHHHHHHHHHHHhcCcEEEeCceEEEE
Q 011787 215 KKLVVIGAGYIGLEMGSVWAR--LGSEVTVVEFAADIVPS-----------MDGEIRKQFQRSLEKQKMKFMLKTKVVGV 281 (477)
Q Consensus 215 ~~v~IiG~G~~g~e~a~~l~~--~g~~Vtli~~~~~~~~~-----------~~~~~~~~~~~~l~~~gv~~~~~~~v~~i 281 (477)
++|+|||||+.|+.+|..|++ .|.+|+++++++.+... ...++...+.+.+++.|++++. .+++.+
T Consensus 3 ~~vvIIGgG~aGl~aA~~L~~~~~g~~Vtlie~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~gv~~~~-~~v~~i 81 (430)
T 3h28_A 3 KHVVVIGGGVGGIATAYNLRNLMPDLKITLISDRPYFGFTPAFPHLAMGWRKFEDISVPLAPLLPKFNIEFIN-EKAESI 81 (430)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCTTCEEEEECSSSEEECGGGHHHHHHTCSCGGGSEEESTTTGGGGTEEEEC-SCEEEE
T ss_pred CCEEEECccHHHHHHHHHHHcCCCCCeEEEECCCCCCCcCCCcchhccCccCHHHHHHHHHHHHHhcCCEEEE-EEEEEE
Confidence 689999999999999999999 78899999998765210 0112222234556678999986 489999
Q ss_pred EEcCCeEEEEEeecCCCceEEEEcCEEEEeecCCCCCC
Q 011787 282 DLSGDGVKLTLEPAAGGEKTILEADVVLVSAGRTPFTA 319 (477)
Q Consensus 282 ~~~~~~~~v~~~~~~~~~~~~i~~D~vi~a~G~~p~~~ 319 (477)
+.++. .+.+. ++.++.+|.+|+|+|.+|+..
T Consensus 82 d~~~~--~v~~~-----~g~~i~~d~liiAtG~~~~~p 112 (430)
T 3h28_A 82 DPDAN--TVTTQ-----SGKKIEYDYLVIATGPKLVFG 112 (430)
T ss_dssp ETTTT--EEEET-----TCCEEECSEEEECCCCEEECC
T ss_pred ECCCC--EEEEC-----CCcEEECCEEEEcCCcccccC
Confidence 76555 34433 456899999999999998765
No 214
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=98.24 E-value=1.8e-06 Score=85.31 Aligned_cols=100 Identities=18% Similarity=0.307 Sum_probs=73.8
Q ss_pred CCeeEEEcccHHHHHHHHHHHHcCC--cEEEEEeCCCcC---CCCC----------HHHHHHHHHHHHhcCcEEEeCceE
Q 011787 214 PKKLVVIGAGYIGLEMGSVWARLGS--EVTVVEFAADIV---PSMD----------GEIRKQFQRSLEKQKMKFMLKTKV 278 (477)
Q Consensus 214 ~~~v~IiG~G~~g~e~a~~l~~~g~--~Vtli~~~~~~~---~~~~----------~~~~~~~~~~l~~~gv~~~~~~~v 278 (477)
..+++|||+|+.|+.+|..|++.|. +|+++++.+.+. +.+. ..+.....+.+++.|++++.++.|
T Consensus 4 ~~~vvIIGgG~aGl~aA~~l~~~g~~~~V~lie~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~~~v 83 (431)
T 1q1r_A 4 NDNVVIVGTGLAGVEVAFGLRASGWEGNIRLVGDATVIPHHLPPLSKAYLAGKATAESLYLRTPDAYAAQNIQLLGGTQV 83 (431)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSCCSCCBCSGGGGTTTTTTCSCSGGGBSSCHHHHHHTTEEEECSCCE
T ss_pred CCcEEEEcCHHHHHHHHHHHHccCcCCCEEEEECCCCCCCcCCCCcHHHhCCCCChHHhcccCHHHHHhCCCEEEeCCEE
Confidence 3689999999999999999999997 799999776431 0000 111111235567889999999999
Q ss_pred EEEEEcCCeEEEEEeecCCCceEEEEcCEEEEeecCCCCCCC
Q 011787 279 VGVDLSGDGVKLTLEPAAGGEKTILEADVVLVSAGRTPFTAG 320 (477)
Q Consensus 279 ~~i~~~~~~~~v~~~~~~~~~~~~i~~D~vi~a~G~~p~~~~ 320 (477)
+.++.++.. +.+. +++++.+|.+|+|+|.+|+...
T Consensus 84 ~~i~~~~~~--v~~~-----~g~~~~~d~lviAtG~~p~~~~ 118 (431)
T 1q1r_A 84 TAINRDRQQ--VILS-----DGRALDYDRLVLATGGRPRPLP 118 (431)
T ss_dssp EEEETTTTE--EEET-----TSCEEECSEEEECCCEEECCCG
T ss_pred EEEECCCCE--EEEC-----CCCEEECCEEEEcCCCCccCCC
Confidence 999765543 4443 4568999999999999987654
No 215
>2b9w_A Putative aminooxidase; isomerase, conjugated linoleic acid, FAD; HET: FAD 12P; 1.95A {Propionibacterium acnes} PDB: 2b9x_A* 2b9y_A* 2ba9_A* 2bab_A* 2bac_A*
Probab=98.24 E-value=8.9e-07 Score=87.31 Aligned_cols=43 Identities=30% Similarity=0.657 Sum_probs=39.5
Q ss_pred CCCcEEEECCChHHHHHHHHHHHCC-CeEEEEecCCCCCceeec
Q 011787 42 DENDVVVIGGGPGGYVAAIKAAQLG-LKTTCIEKRGALGGTCLN 84 (477)
Q Consensus 42 ~~~dvvIIGgG~AGl~aA~~l~~~g-~~V~lie~~~~~GG~~~~ 84 (477)
.++||+|||||++|++||..|++.| .+|+|+|+++.+||.+..
T Consensus 5 ~~~~v~IIGaG~aGl~aA~~L~~~g~~~v~v~E~~~~~GG~~~t 48 (424)
T 2b9w_A 5 KDSRIAIIGAGPAGLAAGMYLEQAGFHDYTILERTDHVGGKCHS 48 (424)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHHTTCCCEEEECSSSCSSTTCCC
T ss_pred CCCCEEEECcCHHHHHHHHHHHhCCCCcEEEEECCCCCCCcccc
Confidence 4589999999999999999999999 899999999999997643
No 216
>2yg5_A Putrescine oxidase; oxidoreductase, flavin; HET: FAD; 1.90A {Rhodococcus erythropolis} PDB: 2yg6_A* 2yg3_A* 2yg4_A* 2yg7_A* 3rha_A*
Probab=98.23 E-value=5e-07 Score=89.97 Aligned_cols=43 Identities=35% Similarity=0.620 Sum_probs=39.5
Q ss_pred CCCcEEEECCChHHHHHHHHHHHCCCeEEEEecCCCCCceeec
Q 011787 42 DENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGALGGTCLN 84 (477)
Q Consensus 42 ~~~dvvIIGgG~AGl~aA~~l~~~g~~V~lie~~~~~GG~~~~ 84 (477)
.++||+|||||++|++||..|++.|++|+|+|+++.+||.+..
T Consensus 4 ~~~~v~iiG~G~~Gl~aA~~l~~~g~~v~v~E~~~~~GG~~~~ 46 (453)
T 2yg5_A 4 LQRDVAIVGAGPSGLAAATALRKAGLSVAVIEARDRVGGRTWT 46 (453)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTTCCE
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCcEEEEECCCCCCCceec
Confidence 3589999999999999999999999999999999999997643
No 217
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=98.23 E-value=8.5e-06 Score=77.43 Aligned_cols=96 Identities=15% Similarity=0.199 Sum_probs=70.7
Q ss_pred CeeEEEcccHHHHHHHHHHHHcCCcEEEEEeCCCcC--------------------CCCCHHHHHHHH------------
Q 011787 215 KKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIV--------------------PSMDGEIRKQFQ------------ 262 (477)
Q Consensus 215 ~~v~IiG~G~~g~e~a~~l~~~g~~Vtli~~~~~~~--------------------~~~~~~~~~~~~------------ 262 (477)
.+|+|||||++|+.+|..|++.|.+|+++++.+.+. ....+.+.+.+.
T Consensus 3 ~dV~IIGaG~~Gl~~A~~L~~~G~~V~vlE~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (336)
T 1yvv_A 3 VPIAIIGTGIAGLSAAQALTAAGHQVHLFDKSRGSGGRMSSKRSDAGALDMGAQYFTARDRRFATAVKQWQAQGHVAEWT 82 (336)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCGGGCEEEETTEEEECSCCCBCCCSHHHHHHHHHHHHHTSEEEEC
T ss_pred ceEEEECCcHHHHHHHHHHHHCCCcEEEEECCCCCcccceeEecCCCeEecCCCeEecCCHHHHHHHHHHHhCCCeeecc
Confidence 479999999999999999999999999999886431 011222222222
Q ss_pred -------------------------------HHHHhcCcEEEeCceEEEEEEcCCeEEEEEeecCCCceEEE-EcCEEEE
Q 011787 263 -------------------------------RSLEKQKMKFMLKTKVVGVDLSGDGVKLTLEPAAGGEKTIL-EADVVLV 310 (477)
Q Consensus 263 -------------------------------~~l~~~gv~~~~~~~v~~i~~~~~~~~v~~~~~~~~~~~~i-~~D~vi~ 310 (477)
+.+. .|++++++++|++++.+++++.+++. +++.+ .+|.||.
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~-~g~~i~~~~~v~~i~~~~~~~~v~~~-----~g~~~~~a~~vV~ 156 (336)
T 1yvv_A 83 PLLYNFHAGRLSPSPDEQVRWVGKPGMSAITRAMR-GDMPVSFSCRITEVFRGEEHWNLLDA-----EGQNHGPFSHVII 156 (336)
T ss_dssp CCEEEESSSBCCCCCTTSCEEEESSCTHHHHHHHH-TTCCEECSCCEEEEEECSSCEEEEET-----TSCEEEEESEEEE
T ss_pred ccceeccCcccccCCCCCccEEcCccHHHHHHHHH-ccCcEEecCEEEEEEEeCCEEEEEeC-----CCcCccccCEEEE
Confidence 2222 27899999999999988888877754 34444 5999999
Q ss_pred eecCCC
Q 011787 311 SAGRTP 316 (477)
Q Consensus 311 a~G~~p 316 (477)
|+|...
T Consensus 157 a~g~~~ 162 (336)
T 1yvv_A 157 ATPAPQ 162 (336)
T ss_dssp CSCHHH
T ss_pred cCCHHH
Confidence 999654
No 218
>1rsg_A FMS1 protein; FAD binding motif, oxidoreductase; HET: FAD; 1.90A {Saccharomyces cerevisiae} PDB: 1z6l_A* 3bi2_A* 3bi4_A* 3bi5_A* 3bnm_B* 3bnu_B* 3cn8_B* 3cnd_B* 3cnp_B* 3cns_A* 3cnt_B* 1yy5_A* 1xpq_A*
Probab=98.21 E-value=5.7e-07 Score=91.12 Aligned_cols=42 Identities=31% Similarity=0.467 Sum_probs=39.0
Q ss_pred CCCcEEEECCChHHHHHHHHHHHCC-CeEEEEecCCCCCceee
Q 011787 42 DENDVVVIGGGPGGYVAAIKAAQLG-LKTTCIEKRGALGGTCL 83 (477)
Q Consensus 42 ~~~dvvIIGgG~AGl~aA~~l~~~g-~~V~lie~~~~~GG~~~ 83 (477)
..+||+|||||+|||+||..|++.| .+|+|+|+++.+||.+.
T Consensus 7 ~~~~VvIIGaG~aGL~AA~~L~~~G~~~V~VlEa~~riGGr~~ 49 (516)
T 1rsg_A 7 AKKKVIIIGAGIAGLKAASTLHQNGIQDCLVLEARDRVGGRLQ 49 (516)
T ss_dssp EEEEEEEECCBHHHHHHHHHHHHTTCCSEEEECSSSSSBTTCC
T ss_pred CCCcEEEECCCHHHHHHHHHHHhcCCCCEEEEeCCCCCCCcee
Confidence 3579999999999999999999999 99999999999999763
No 219
>2jae_A L-amino acid oxidase; oxidoreductase, dimerisation mode, hydride transfer mechanism, GR2-family, flavoenzyme, FAD containing; HET: FAD; 1.25A {Rhodococcus opacus} PDB: 2jb1_A* 2jb2_A* 2jb3_A*
Probab=98.20 E-value=1.4e-06 Score=87.66 Aligned_cols=43 Identities=37% Similarity=0.669 Sum_probs=39.6
Q ss_pred CCCCCcEEEECCChHHHHHHHHHHHCCCeEEEEecCCCCCcee
Q 011787 40 ASDENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGALGGTC 82 (477)
Q Consensus 40 ~~~~~dvvIIGgG~AGl~aA~~l~~~g~~V~lie~~~~~GG~~ 82 (477)
+...+||+|||||+||++||..|++.|++|+|+|+++.+||.+
T Consensus 8 ~~~~~~v~IIGaG~aGl~aA~~L~~~g~~v~v~E~~~~~GG~~ 50 (489)
T 2jae_A 8 VKGSHSVVVLGGGPAGLCSAFELQKAGYKVTVLEARTRPGGRV 50 (489)
T ss_dssp CCSCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCTTC
T ss_pred ccCCCCEEEECCCHHHHHHHHHHHHCCCCEEEEeccCCCCCce
Confidence 4456899999999999999999999999999999999999964
No 220
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=98.20 E-value=9e-06 Score=76.18 Aligned_cols=100 Identities=18% Similarity=0.166 Sum_probs=69.2
Q ss_pred eeEEEcccHHHHHHHHHHHHcCCcEEEEEeCCCc------CC-------CCCHHHHHHHHHHHHhcCcEEEeCceEEEEE
Q 011787 216 KLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADI------VP-------SMDGEIRKQFQRSLEKQKMKFMLKTKVVGVD 282 (477)
Q Consensus 216 ~v~IiG~G~~g~e~a~~l~~~g~~Vtli~~~~~~------~~-------~~~~~~~~~~~~~l~~~gv~~~~~~~v~~i~ 282 (477)
.|+|||+|+.|+.+|..+++.|.+|+++++...- .+ ...+++.+...+.+.+.+...+....+..+.
T Consensus 8 DVvIIGaGpAGlsAA~~lar~g~~v~lie~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (304)
T 4fk1_A 8 DCAVIGAGPAGLNASLVLGRARKQIALFDNNTNRNRVTQNSHGFITRDGIKPEEFKEIGLNEVMKYPSVHYYEKTVVMIT 87 (304)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCEEEEECSCCGGGGSSCBCCSTTCTTBCHHHHHHHHHHHHTTSTTEEEEECCEEEEE
T ss_pred CEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCCCeeeeecCCccCCCCCCHHHHHHHHHHHHHhcCCEEEEeeEEEEee
Confidence 5899999999999999999999999999975421 01 1124555555555555544444445555554
Q ss_pred Ec-CCeEEEEEeecCCCceEEEEcCEEEEeecCCCCCCC
Q 011787 283 LS-GDGVKLTLEPAAGGEKTILEADVVLVSAGRTPFTAG 320 (477)
Q Consensus 283 ~~-~~~~~v~~~~~~~~~~~~i~~D~vi~a~G~~p~~~~ 320 (477)
.. ++...+.+. +++++.+|.||+|||.+|....
T Consensus 88 ~~~~~~~~v~~~-----~g~~~~a~~liiATGs~p~~p~ 121 (304)
T 4fk1_A 88 KQSTGLFEIVTK-----DHTKYLAERVLLATGMQEEFPS 121 (304)
T ss_dssp ECTTSCEEEEET-----TCCEEEEEEEEECCCCEEECCS
T ss_pred ecCCCcEEEEEC-----CCCEEEeCEEEEccCCcccccc
Confidence 43 444555554 5679999999999999887654
No 221
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=98.19 E-value=4.5e-06 Score=84.76 Aligned_cols=100 Identities=19% Similarity=0.324 Sum_probs=76.4
Q ss_pred CeeEEEcccHHHHHHHHHHHHcCCcEEEEEeCCCcC--------C-----------------------C------CCHHH
Q 011787 215 KKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIV--------P-----------------------S------MDGEI 257 (477)
Q Consensus 215 ~~v~IiG~G~~g~e~a~~l~~~g~~Vtli~~~~~~~--------~-----------------------~------~~~~~ 257 (477)
.+|+|||+|+.|+.+|..|++.|.+|+++++.+.+. | . ..+++
T Consensus 10 ~dVvIIGaG~aGl~aA~~L~~~g~~v~iiE~~~~~GGtw~~~~yPg~~~d~~~~~y~~~f~~~~~~~~~~~~~~~~~~ei 89 (545)
T 3uox_A 10 LDAVVIGAGVTGIYQAFLINQAGMKVLGIEAGEDVGGTWYWNRYPGCRLDTESYAYGYFALKGIIPEWEWSENFASQPEM 89 (545)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTHHHHCCCTTCBCSSCHHHHCHHHHTTSSTTCCCSBSSCBHHHH
T ss_pred CCEEEECccHHHHHHHHHHHhCCCCEEEEeCCCCCCCccccCCCCceeecCchhhcccccCcccccCCCccccCCCHHHH
Confidence 479999999999999999999999999999876431 0 0 12466
Q ss_pred HHHHHHHHHhcCc--EEEeCceEEEEEEcCC--eEEEEEeecCCCceEEEEcCEEEEeec--CCCCCC
Q 011787 258 RKQFQRSLEKQKM--KFMLKTKVVGVDLSGD--GVKLTLEPAAGGEKTILEADVVLVSAG--RTPFTA 319 (477)
Q Consensus 258 ~~~~~~~l~~~gv--~~~~~~~v~~i~~~~~--~~~v~~~~~~~~~~~~i~~D~vi~a~G--~~p~~~ 319 (477)
...+.+..++.|+ .+.++++|++++.+++ .+.+++. +++++.+|.||+|+| .+|+..
T Consensus 90 ~~yl~~~~~~~~l~~~i~~~~~V~~~~~~~~~~~w~V~~~-----~G~~~~ad~lV~AtG~~s~p~~p 152 (545)
T 3uox_A 90 LRYVNRAADAMDVRKHYRFNTRVTAARYVENDRLWEVTLD-----NEEVVTCRFLISATGPLSASRMP 152 (545)
T ss_dssp HHHHHHHHHHHTCGGGEECSCCEEEEEEEGGGTEEEEEET-----TTEEEEEEEEEECCCSCBC---C
T ss_pred HHHHHHHHHHcCCcCcEEECCEEEEEEEeCCCCEEEEEEC-----CCCEEEeCEEEECcCCCCCCcCC
Confidence 7777777777787 7888999999976544 5556654 567899999999999 566654
No 222
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=98.19 E-value=1.1e-06 Score=86.00 Aligned_cols=99 Identities=19% Similarity=0.177 Sum_probs=70.9
Q ss_pred CCeeEEEcccHHHHHHHHHHHHcC--CcEEEEEeCCCcCC-CC---------CHHHHHHHHHHHHhcCcEEEeCceEEEE
Q 011787 214 PKKLVVIGAGYIGLEMGSVWARLG--SEVTVVEFAADIVP-SM---------DGEIRKQFQRSLEKQKMKFMLKTKVVGV 281 (477)
Q Consensus 214 ~~~v~IiG~G~~g~e~a~~l~~~g--~~Vtli~~~~~~~~-~~---------~~~~~~~~~~~l~~~gv~~~~~~~v~~i 281 (477)
+|+|+|||+|+.|+.+|..|++.+ .+|+++++++.... .+ +.+....-.+.+.+.||+++. .+|+.|
T Consensus 2 GKkVvIIG~G~AG~~aA~~L~~~~~~~~Vtlie~~~~~~~~p~~~~v~~g~~~~~~~~~~~~~~~~~gv~~i~-~~v~~i 80 (401)
T 3vrd_B 2 GRKVVVVGGGTGGATAAKYIKLADPSIEVTLIEPNETYYTCYMSNEVIGGDRELASLRVGYDGLRAHGIQVVH-DSALGI 80 (401)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSCSSEECSTTHHHHHHTSSCGGGGEECSHHHHHTTCEEEC-SCEEEE
T ss_pred cCEEEEECCcHHHHHHHHHHHhcCcCCeEEEEeCCCCCCCccCHHHHhcCCCCHHHHhhCHHHHHHCCCEEEE-eEEEEE
Confidence 689999999999999999998876 48999998875421 11 111101112345678999985 478899
Q ss_pred EEcCCeEEEEEeecCCCceEEEEcCEEEEeecCCCCCCC
Q 011787 282 DLSGDGVKLTLEPAAGGEKTILEADVVLVSAGRTPFTAG 320 (477)
Q Consensus 282 ~~~~~~~~v~~~~~~~~~~~~i~~D~vi~a~G~~p~~~~ 320 (477)
+.+.+.+. +. ++.++.+|.+++|+|.+++...
T Consensus 81 d~~~~~v~--~~-----~g~~i~yd~LviAtG~~~~~~~ 112 (401)
T 3vrd_B 81 DPDKKLVK--TA-----GGAEFAYDRCVVAPGIDLLYDK 112 (401)
T ss_dssp ETTTTEEE--ET-----TSCEEECSEEEECCCEEECGGG
T ss_pred EccCcEEE--ec-----ccceeecceeeeccCCccccCC
Confidence 76655443 32 5678999999999999887643
No 223
>2weu_A Tryptophan 5-halogenase; regioselectivity, antifungal protei; HET: TRP; 1.70A {Streptomyces rugosporus} PDB: 2wet_A* 2wes_A*
Probab=98.19 E-value=4.9e-06 Score=84.13 Aligned_cols=33 Identities=27% Similarity=0.499 Sum_probs=30.3
Q ss_pred CcEEEECCChHHHHHHHHHHH---CCCeEEEEecCC
Q 011787 44 NDVVVIGGGPGGYVAAIKAAQ---LGLKTTCIEKRG 76 (477)
Q Consensus 44 ~dvvIIGgG~AGl~aA~~l~~---~g~~V~lie~~~ 76 (477)
+||+|||||++|+++|..|++ .|.+|+|||+.+
T Consensus 3 ~dVvIVGgG~aGl~~A~~La~~~~~G~~V~lvE~~~ 38 (511)
T 2weu_A 3 RSVVIVGGGTAGWMTASYLKAAFDDRIDVTLVESGN 38 (511)
T ss_dssp CEEEEECCHHHHHHHHHHHHHHHGGGSEEEEEEC--
T ss_pred ceEEEECCCHHHHHHHHHHHhhcCCCCEEEEEecCC
Confidence 699999999999999999999 999999999964
No 224
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=98.19 E-value=2.1e-06 Score=84.06 Aligned_cols=98 Identities=14% Similarity=0.302 Sum_probs=73.5
Q ss_pred CeeEEEcccHHHHHHHHHHHHcCC--cEEEEEeCCCcC---CCC----------CHHHHHHHHHHHHhcCcEEEeCceEE
Q 011787 215 KKLVVIGAGYIGLEMGSVWARLGS--EVTVVEFAADIV---PSM----------DGEIRKQFQRSLEKQKMKFMLKTKVV 279 (477)
Q Consensus 215 ~~v~IiG~G~~g~e~a~~l~~~g~--~Vtli~~~~~~~---~~~----------~~~~~~~~~~~l~~~gv~~~~~~~v~ 279 (477)
++|+|||+|+.|+.+|..|++.|. +|+++++.+... +.+ ..++.....+.+.+.+++++. ++++
T Consensus 2 k~vvIIGaG~aGl~aA~~L~~~g~~~~V~lie~~~~~~y~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~~-~~v~ 80 (404)
T 3fg2_P 2 DTVLIAGAGHAGFQVAVSLRQAKYPGRIALINDEKHLPYQRPPLSKAYLKSGGDPNSLMFRPEKFFQDQAIELIS-DRMV 80 (404)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCSCEEEECCSSSSSBCSGGGGTGGGGSCCCTTSSBSSCHHHHHHTTEEEEC-CCEE
T ss_pred CCEEEEcChHHHHHHHHHHHhhCcCCCEEEEeCCCCCCCCCccCCHHHHCCCCCHHHccCCCHHHHHhCCCEEEE-EEEE
Confidence 689999999999999999999998 899999877431 111 111222234566788999998 9999
Q ss_pred EEEEcCCeEEEEEeecCCCceEEEEcCEEEEeecCCCCCCC
Q 011787 280 GVDLSGDGVKLTLEPAAGGEKTILEADVVLVSAGRTPFTAG 320 (477)
Q Consensus 280 ~i~~~~~~~~v~~~~~~~~~~~~i~~D~vi~a~G~~p~~~~ 320 (477)
.++..... +.+. ++.++.+|.+++|+|.+|....
T Consensus 81 ~id~~~~~--v~~~-----~g~~~~~d~lvlAtG~~p~~~~ 114 (404)
T 3fg2_P 81 SIDREGRK--LLLA-----SGTAIEYGHLVLATGARNRMLD 114 (404)
T ss_dssp EEETTTTE--EEES-----SSCEEECSEEEECCCEEECCCC
T ss_pred EEECCCCE--EEEC-----CCCEEECCEEEEeeCCCccCCC
Confidence 99766554 3433 5578999999999998887643
No 225
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=98.19 E-value=3.2e-06 Score=83.58 Aligned_cols=103 Identities=19% Similarity=0.261 Sum_probs=75.0
Q ss_pred eeEEEcccHHHHHHHHHHHHcC--CcEEEEEeCCCcCC---CC---------CHH--HHHHHHHHHHhcCcEEEeCceEE
Q 011787 216 KLVVIGAGYIGLEMGSVWARLG--SEVTVVEFAADIVP---SM---------DGE--IRKQFQRSLEKQKMKFMLKTKVV 279 (477)
Q Consensus 216 ~v~IiG~G~~g~e~a~~l~~~g--~~Vtli~~~~~~~~---~~---------~~~--~~~~~~~~l~~~gv~~~~~~~v~ 279 (477)
+|+|||+|+.|+.+|..+++.| .+|+++++.+...- .+ +.. +....++.+++.+++++.+++|+
T Consensus 2 KVvIIG~G~AGl~aA~~l~~~g~~~~V~lie~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~V~ 81 (437)
T 4eqs_A 2 KIVVVGAVAGGATCASQIRRLDKESDIIIFEKDRDMSFANCALPYVIGEVVEDRRYALAYTPEKFYDRKQITVKTYHEVI 81 (437)
T ss_dssp CEEEECCSTTHHHHHHHHHHHCSSSCEEEEESSSCSSBCGGGHHHHHTTSSCCGGGTBCCCHHHHHHHHCCEEEETEEEE
T ss_pred eEEEECCCHHHHHHHHHHHhCCCCCcEEEEeCCCCCCCCcchhHHHHcCCccchhhhhhcCHHHHHHhcCCEEEeCCeEE
Confidence 4899999999999999999988 46999998765310 00 000 11112345567899999999999
Q ss_pred EEEEcCCeEEEEEeecCCCceEEEEcCEEEEeecCCCCCCC
Q 011787 280 GVDLSGDGVKLTLEPAAGGEKTILEADVVLVSAGRTPFTAG 320 (477)
Q Consensus 280 ~i~~~~~~~~v~~~~~~~~~~~~i~~D~vi~a~G~~p~~~~ 320 (477)
.++.....+.+. ...++++.++.+|.+|+|||.+|+...
T Consensus 82 ~id~~~~~~~~~--~~~~~~~~~~~yd~lVIATGs~p~~p~ 120 (437)
T 4eqs_A 82 AINDERQTVSVL--NRKTNEQFEESYDKLILSPGASANSLG 120 (437)
T ss_dssp EEETTTTEEEEE--ETTTTEEEEEECSEEEECCCEEECCCC
T ss_pred EEEccCcEEEEE--eccCCceEEEEcCEEEECCCCcccccc
Confidence 997766655544 334556778999999999999987654
No 226
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=98.18 E-value=6.8e-06 Score=83.15 Aligned_cols=101 Identities=10% Similarity=0.177 Sum_probs=78.1
Q ss_pred CCeeEEEcccHHHHHHHHHHHHcCCcEEEEEeCC--CcC-----------C-CCCHHHHHHHHHHHHhcCcEEEeCceEE
Q 011787 214 PKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAA--DIV-----------P-SMDGEIRKQFQRSLEKQKMKFMLKTKVV 279 (477)
Q Consensus 214 ~~~v~IiG~G~~g~e~a~~l~~~g~~Vtli~~~~--~~~-----------~-~~~~~~~~~~~~~l~~~gv~~~~~~~v~ 279 (477)
..+|+|||||+.|+.+|..+++.|.+|+++++.. ... + ...+++...+.+.+++.|++++.+++++
T Consensus 212 ~~dVvIIGgG~AGl~aA~~la~~G~~v~lie~~~GG~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~gv~v~~~~~v~ 291 (521)
T 1hyu_A 212 AYDVLIVGSGPAGAAAAVYSARKGIRTGLMGERFGGQVLDTVDIENYISVPKTEGQKLAGALKAHVSDYDVDVIDSQSAS 291 (521)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSTTGGGTTCSCBCCBTTBSSBCHHHHHHHHHHHHHTSCEEEECSCCEE
T ss_pred cccEEEECCcHHHHHHHHHHHhCCCeEEEEECCCCCcccccccccccCCCCCCCHHHHHHHHHHHHHHcCCEEEcCCEEE
Confidence 4679999999999999999999999999997531 111 0 1124677778888889999999999999
Q ss_pred EEEEcC---CeEEEEEeecCCCceEEEEcCEEEEeecCCCCCC
Q 011787 280 GVDLSG---DGVKLTLEPAAGGEKTILEADVVLVSAGRTPFTA 319 (477)
Q Consensus 280 ~i~~~~---~~~~v~~~~~~~~~~~~i~~D~vi~a~G~~p~~~ 319 (477)
.++.+. +...+++. ++..+.+|.+|+|+|.+|...
T Consensus 292 ~i~~~~~~~~~~~V~~~-----~g~~~~~d~vVlAtG~~~~~~ 329 (521)
T 1hyu_A 292 KLVPAATEGGLHQIETA-----SGAVLKARSIIIATGAKWRNM 329 (521)
T ss_dssp EEECCSSTTSCEEEEET-----TSCEEEEEEEEECCCEEECCC
T ss_pred EEEeccCCCceEEEEEC-----CCCEEEcCEEEECCCCCcCCC
Confidence 997542 24556654 456899999999999877653
No 227
>2i0z_A NAD(FAD)-utilizing dehydrogenases; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: FAD; 1.84A {Bacillus cereus} SCOP: c.3.1.8 e.74.1.1
Probab=98.18 E-value=8.3e-06 Score=80.92 Aligned_cols=97 Identities=19% Similarity=0.273 Sum_probs=75.7
Q ss_pred CeeEEEcccHHHHHHHHHHHHcCCcEEEEEeCCCcCC-----------------------C--------------C----
Q 011787 215 KKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIVP-----------------------S--------------M---- 253 (477)
Q Consensus 215 ~~v~IiG~G~~g~e~a~~l~~~g~~Vtli~~~~~~~~-----------------------~--------------~---- 253 (477)
.+|+|||||..|+.+|..+++.|.+|+++++.+.+.. . +
T Consensus 27 ~dVvIIGgG~aGl~aA~~la~~G~~V~llEk~~~~g~~~~~sg~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 106 (447)
T 2i0z_A 27 YDVIVIGGGPSGLMAAIGAAEEGANVLLLDKGNKLGRKLAISGGGRCNVTNRLPLDEIVKHIPGNGRFLYSAFSIFNNED 106 (447)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHHHTGGGTCCCEECSCHHHHHHTCTBTGGGGHHHHHHSCHHH
T ss_pred CCEEEECCcHHHHHHHHHHHHCCCCEEEEECCCCCCceeEEeCCCceeccCcccHHHHHHHhccChHHHHHHHHhcCHHH
Confidence 4699999999999999999999999999998764210 0 0
Q ss_pred --------------------------CHHHHHHHHHHHHhcCcEEEeCceEEEEEEcCCe-EEEEEeecCCCceEEEEcC
Q 011787 254 --------------------------DGEIRKQFQRSLEKQKMKFMLKTKVVGVDLSGDG-VKLTLEPAAGGEKTILEAD 306 (477)
Q Consensus 254 --------------------------~~~~~~~~~~~l~~~gv~~~~~~~v~~i~~~~~~-~~v~~~~~~~~~~~~i~~D 306 (477)
...+.+.+.+.+++.|++++++++|+++..++++ +.+++. +++.+.+|
T Consensus 107 ~~~~~~~~G~~~~~~~~g~~~p~~~~~~~l~~~L~~~~~~~GV~i~~~~~V~~i~~~~~~v~~V~~~-----~G~~i~Ad 181 (447)
T 2i0z_A 107 IITFFENLGVKLKEEDHGRMFPVSNKAQSVVDALLTRLKDLGVKIRTNTPVETIEYENGQTKAVILQ-----TGEVLETN 181 (447)
T ss_dssp HHHHHHHTTCCEEECGGGEEEETTCCHHHHHHHHHHHHHHTTCEEECSCCEEEEEEETTEEEEEEET-----TCCEEECS
T ss_pred HHHHHHhcCCceEEeeCCEEECCCCCHHHHHHHHHHHHHHCCCEEEeCcEEEEEEecCCcEEEEEEC-----CCCEEECC
Confidence 0233455666777889999999999999877666 456553 34579999
Q ss_pred EEEEeecCCC
Q 011787 307 VVLVSAGRTP 316 (477)
Q Consensus 307 ~vi~a~G~~p 316 (477)
.||+|+|..+
T Consensus 182 ~VVlAtGg~s 191 (447)
T 2i0z_A 182 HVVIAVGGKS 191 (447)
T ss_dssp CEEECCCCSS
T ss_pred EEEECCCCCc
Confidence 9999999877
No 228
>3i6d_A Protoporphyrinogen oxidase; protein-inhibitor complex, cytoplasm, FAD, flavoprotein, oxidoreductase, porphyrin biosynthesis; HET: FAD ACJ; 2.90A {Bacillus subtilis}
Probab=98.18 E-value=6.3e-07 Score=89.62 Aligned_cols=42 Identities=33% Similarity=0.461 Sum_probs=38.4
Q ss_pred CCcEEEECCChHHHHHHHHHHHCC------CeEEEEecCCCCCceeec
Q 011787 43 ENDVVVIGGGPGGYVAAIKAAQLG------LKTTCIEKRGALGGTCLN 84 (477)
Q Consensus 43 ~~dvvIIGgG~AGl~aA~~l~~~g------~~V~lie~~~~~GG~~~~ 84 (477)
++||+|||||++|++||++|++.| ++|+|+|+++.+||.+..
T Consensus 5 ~~dVvIIGaGiaGLsaA~~L~~~G~~~~~~~~V~vlEa~~~~GG~~~s 52 (470)
T 3i6d_A 5 KKHVVIIGGGITGLAAAFYMEKEIKEKNLPLELTLVEASPRVGGKIQT 52 (470)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHHTTTTCSEEEEEECSSSSSCTTCCE
T ss_pred CCcEEEECCCHHHHHHHHHHHHhccccCCCCCEEEEECCCCCCceEEE
Confidence 589999999999999999999999 999999999999986543
No 229
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=98.17 E-value=3.8e-06 Score=86.13 Aligned_cols=104 Identities=19% Similarity=0.242 Sum_probs=75.7
Q ss_pred CeeEEEcccHHHHHHHHHHHHc--CCcEEEEEeCCCcC-C----------CC-CH--HHHHHHHHHHHhcCcEEEeCceE
Q 011787 215 KKLVVIGAGYIGLEMGSVWARL--GSEVTVVEFAADIV-P----------SM-DG--EIRKQFQRSLEKQKMKFMLKTKV 278 (477)
Q Consensus 215 ~~v~IiG~G~~g~e~a~~l~~~--g~~Vtli~~~~~~~-~----------~~-~~--~~~~~~~~~l~~~gv~~~~~~~v 278 (477)
++|+|||||+.|+.+|..|++. +.+|+++++.+.+. . .+ +. .+........++.|++++++++|
T Consensus 2 ~~VvIIGgG~AGl~aA~~L~~~~~~~~V~lie~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~V 81 (565)
T 3ntd_A 2 KKILIIGGVAGGASAAARARRLSETAEIIMFERGEYVSFANCGLPYHISGEIAQRSALVLQTPESFKARFNVEVRVKHEV 81 (565)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCSSSEEEEECSSSCSSBCGGGHHHHHTSSSCCGGGGBCCCHHHHHHHHCCEEETTEEE
T ss_pred CcEEEECCCHHHHHHHHHHHhhCcCCCEEEEECCCCccccccCchHHhcCCcCChHHhhccCHHHHHHhcCcEEEECCEE
Confidence 5799999999999999999998 78999999887641 0 00 00 11112233344579999999999
Q ss_pred EEEEEcCCeEEEEEeecCCCceEEEEcCEEEEeecCCCCCCC
Q 011787 279 VGVDLSGDGVKLTLEPAAGGEKTILEADVVLVSAGRTPFTAG 320 (477)
Q Consensus 279 ~~i~~~~~~~~v~~~~~~~~~~~~i~~D~vi~a~G~~p~~~~ 320 (477)
++++.+++.+.+.. ..+++..++.+|.+|+|||.+|....
T Consensus 82 ~~id~~~~~v~~~~--~~~g~~~~~~~d~lviAtG~~p~~p~ 121 (565)
T 3ntd_A 82 VAIDRAAKLVTVRR--LLDGSEYQESYDTLLLSPGAAPIVPP 121 (565)
T ss_dssp EEEETTTTEEEEEE--TTTCCEEEEECSEEEECCCEEECCCC
T ss_pred EEEECCCCEEEEEe--cCCCCeEEEECCEEEECCCCCCCCCC
Confidence 99987776655542 22345568999999999999887653
No 230
>3atr_A Conserved archaeal protein; saturating double bonds, archaeal membrane precursor, like 2 geranylgeranylglyceryl phosphate; HET: FDA; 1.80A {Sulfolobus acidocaldarius} PDB: 3atq_A*
Probab=98.17 E-value=1.1e-05 Score=80.08 Aligned_cols=104 Identities=14% Similarity=0.146 Sum_probs=79.2
Q ss_pred CeeEEEcccHHHHHHHHHHHHcCCcEEEEEeCCCcCC----C--------------------------------------
Q 011787 215 KKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIVP----S-------------------------------------- 252 (477)
Q Consensus 215 ~~v~IiG~G~~g~e~a~~l~~~g~~Vtli~~~~~~~~----~-------------------------------------- 252 (477)
.+|+|||||+.|+.+|..|++.|.+|+++++.+.... .
T Consensus 7 ~dVvIVGaG~aGl~aA~~La~~G~~V~vlE~~~~~~~g~~~~g~~l~~~~l~~lg~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (453)
T 3atr_A 7 YDVLIIGGGFAGSSAAYQLSRRGLKILLVDSKPWNRIGDKPCGDAVSKAHFDKLGMPYPKGEELENKINGIKLYSPDMQT 86 (453)
T ss_dssp CSEEEECCSHHHHHHHHHHSSSSCCEEEECSSCGGGTTCSCCCCEEEHHHHHHTTCCCCCGGGEEEEEEEEEEECTTSSC
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCCCCcccccccccHHHHHHhcCCCCchHHHHhhhcceEEECCCCce
Confidence 3699999999999999999999999999998764210 0
Q ss_pred ----------CC-HHHHHHHHHHHHhcCcEEEeCceEEEEEEcCCeEE-EEEeecCCCceEEEEcCEEEEeecCCCCC
Q 011787 253 ----------MD-GEIRKQFQRSLEKQKMKFMLKTKVVGVDLSGDGVK-LTLEPAAGGEKTILEADVVLVSAGRTPFT 318 (477)
Q Consensus 253 ----------~~-~~~~~~~~~~l~~~gv~~~~~~~v~~i~~~~~~~~-v~~~~~~~~~~~~i~~D~vi~a~G~~p~~ 318 (477)
++ ..+.+.+.+.+++.|++++++++|+++..+++.+. +++.+..+++..++.+|.||.|+|..+..
T Consensus 87 ~~~~~~~~~~i~r~~l~~~L~~~a~~~gv~i~~~~~v~~i~~~~~~v~gv~~~~~~~G~~~~~~ad~VV~AdG~~s~v 164 (453)
T 3atr_A 87 VWTVNGEGFELNAPLYNQRVLKEAQDRGVEIWDLTTAMKPIFEDGYVKGAVLFNRRTNEELTVYSKVVVEATGYSRSF 164 (453)
T ss_dssp EEEEEEEEEEECHHHHHHHHHHHHHHTTCEEESSEEEEEEEEETTEEEEEEEEETTTTEEEEEECSEEEECCGGGCTT
T ss_pred EEeECCCcEEEcHHHHHHHHHHHHHHcCCEEEeCcEEEEEEEECCEEEEEEEEEcCCCceEEEEcCEEEECcCCchhh
Confidence 00 23556666777778999999999999988777765 55543213334589999999999987754
No 231
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=98.16 E-value=2.7e-06 Score=83.64 Aligned_cols=100 Identities=21% Similarity=0.288 Sum_probs=75.1
Q ss_pred CCeeEEEcccHHHHHHHHHHHHcCCc--EEEEEeCCCcC---C-----CC-----CHHHHHHHHHHHHhcCcEEEeCceE
Q 011787 214 PKKLVVIGAGYIGLEMGSVWARLGSE--VTVVEFAADIV---P-----SM-----DGEIRKQFQRSLEKQKMKFMLKTKV 278 (477)
Q Consensus 214 ~~~v~IiG~G~~g~e~a~~l~~~g~~--Vtli~~~~~~~---~-----~~-----~~~~~~~~~~~l~~~gv~~~~~~~v 278 (477)
.++|+|||+|+.|+.+|..|++.|.+ |+++++.+.+. + .+ ...+.....+.+++.|++++.++++
T Consensus 9 ~~~vvIIGaG~aGl~aA~~L~~~g~~~~V~lie~~~~~~y~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~v 88 (415)
T 3lxd_A 9 RADVVIVGAGHGGAQAAIALRQNGFEGRVLVIGREPEIPYERPPLSKEYLAREKTFERICIRPAQFWEDKAVEMKLGAEV 88 (415)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCSCEEEEESSSSCCBCSGGGGTTTTTTSSCSGGGBSSCHHHHHHTTEEEEETCCE
T ss_pred CCcEEEECChHHHHHHHHHHHccCcCCCEEEEecCCCCCcCcccCCHHHHcCCCCHHHhccCCHHHHHHCCcEEEeCCEE
Confidence 35799999999999999999999987 99999876531 0 00 1122223355677889999999999
Q ss_pred EEEEEcCCeEEEEEeecCCCceEEEEcCEEEEeecCCCCCCC
Q 011787 279 VGVDLSGDGVKLTLEPAAGGEKTILEADVVLVSAGRTPFTAG 320 (477)
Q Consensus 279 ~~i~~~~~~~~v~~~~~~~~~~~~i~~D~vi~a~G~~p~~~~ 320 (477)
+.++..... +.+. ++..+.+|.+++|+|.+|....
T Consensus 89 ~~id~~~~~--v~~~-----~g~~~~~d~lvlAtG~~~~~~~ 123 (415)
T 3lxd_A 89 VSLDPAAHT--VKLG-----DGSAIEYGKLIWATGGDPRRLS 123 (415)
T ss_dssp EEEETTTTE--EEET-----TSCEEEEEEEEECCCEECCCCB
T ss_pred EEEECCCCE--EEEC-----CCCEEEeeEEEEccCCccCCCC
Confidence 999765544 3333 5578999999999998887653
No 232
>2vvm_A Monoamine oxidase N; FAD, peroxisome, flavoprotein, oxidoreductase, enantioselectivity, directed evolution variant; HET: FAD; 1.85A {Aspergillus niger} PDB: 2vvl_A* 2vvl_G*
Probab=98.16 E-value=1.2e-06 Score=88.33 Aligned_cols=56 Identities=13% Similarity=0.163 Sum_probs=45.6
Q ss_pred HHHHHHHHHHHHhcC-cEEEeCceEEEEEEcCCeEEEEEeecCCCceEEEEcCEEEEeecCC
Q 011787 255 GEIRKQFQRSLEKQK-MKFMLKTKVVGVDLSGDGVKLTLEPAAGGEKTILEADVVLVSAGRT 315 (477)
Q Consensus 255 ~~~~~~~~~~l~~~g-v~~~~~~~v~~i~~~~~~~~v~~~~~~~~~~~~i~~D~vi~a~G~~ 315 (477)
..+.+.+.+.+++.| ++++++++|++|+.+++++.+++. +++++.+|.||+|+|..
T Consensus 255 ~~l~~~l~~~l~~~g~~~i~~~~~V~~i~~~~~~v~v~~~-----~g~~~~ad~vI~a~~~~ 311 (495)
T 2vvm_A 255 SAFARRFWEEAAGTGRLGYVFGCPVRSVVNERDAARVTAR-----DGREFVAKRVVCTIPLN 311 (495)
T ss_dssp HHHHHHHHHHHHTTTCEEEESSCCEEEEEECSSSEEEEET-----TCCEEEEEEEEECCCGG
T ss_pred HHHHHHHHHHhhhcCceEEEeCCEEEEEEEcCCEEEEEEC-----CCCEEEcCEEEECCCHH
Confidence 366777788888888 999999999999887777777654 45579999999999853
No 233
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=98.16 E-value=5.5e-06 Score=82.85 Aligned_cols=104 Identities=21% Similarity=0.337 Sum_probs=68.0
Q ss_pred CeeEEEcccHHHHHHHHHHHHc--CCcEEEEEeCCCc------CCC-CC------HHH-------HHHHHHHHHhcCcEE
Q 011787 215 KKLVVIGAGYIGLEMGSVWARL--GSEVTVVEFAADI------VPS-MD------GEI-------RKQFQRSLEKQKMKF 272 (477)
Q Consensus 215 ~~v~IiG~G~~g~e~a~~l~~~--g~~Vtli~~~~~~------~~~-~~------~~~-------~~~~~~~l~~~gv~~ 272 (477)
++|+|||+|+.|+.+|..|++. |.+|+++++.+.+ ++. +. .++ ........++.|+++
T Consensus 4 ~~VvIIGaG~aGl~aA~~L~~~~~g~~Vtvie~~~~~~~~~~gl~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~ 83 (472)
T 3iwa_A 4 KHVVVIGAVALGPKAACRFKRLDPEAHVTMIDQASRISYGGCGIPYYVSGEVSNIESLQATPYNVVRDPEFFRINKDVEA 83 (472)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHCTTSEEEEECCC-------------------------------------------CEE
T ss_pred CcEEEECCCHHHHHHHHHHHhhCcCCCEEEEECCCcccccccccchhhcCCCCchHHhccccchhccCHHHHhhhcCcEE
Confidence 6899999999999999999998 8999999998864 111 11 111 112222233579999
Q ss_pred EeCceEEEEEEcCCeEEEEEeecCCCceEEEEcCEEEEeecCCCCCCC
Q 011787 273 MLKTKVVGVDLSGDGVKLTLEPAAGGEKTILEADVVLVSAGRTPFTAG 320 (477)
Q Consensus 273 ~~~~~v~~i~~~~~~~~v~~~~~~~~~~~~i~~D~vi~a~G~~p~~~~ 320 (477)
+++++|++++.+++.+.+.. ..++....+.+|.+|+|+|.+|....
T Consensus 84 ~~~~~V~~id~~~~~v~~~~--~~~g~~~~~~~d~lviAtG~~p~~p~ 129 (472)
T 3iwa_A 84 LVETRAHAIDRAAHTVEIEN--LRTGERRTLKYDKLVLALGSKANRPP 129 (472)
T ss_dssp ECSEEEEEEETTTTEEEEEE--TTTCCEEEEECSEEEECCCEEECCCS
T ss_pred EECCEEEEEECCCCEEEEee--cCCCCEEEEECCEEEEeCCCCcCCCC
Confidence 99999999987776665542 22234458999999999999887653
No 234
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.16 E-value=3.4e-06 Score=83.96 Aligned_cols=99 Identities=22% Similarity=0.302 Sum_probs=68.4
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCeEEEEecCCCCCceeeccCccCchhhhhhhHHHHHHHhhhhhCCccccccccChH
Q 011787 43 ENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSVEVDLP 122 (477)
Q Consensus 43 ~~dvvIIGgG~AGl~aA~~l~~~g~~V~lie~~~~~GG~~~~~~~~p~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 122 (477)
..+++|||||++|+.+|..|++.|.+|+|+++.+.+... .+
T Consensus 171 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~------~~--------------------------------- 211 (458)
T 1lvl_A 171 PQHLVVVGGGYIGLELGIAYRKLGAQVSVVEARERILPT------YD--------------------------------- 211 (458)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSSSTT------SC---------------------------------
T ss_pred CCeEEEECcCHHHHHHHHHHHHCCCeEEEEEcCCccccc------cC---------------------------------
Confidence 468999999999999999999999999999986543110 00
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhCCeEEEEe-EEEEecCCEEEEEecCCceEEEEecEEEEccCCCCCC
Q 011787 123 AMMAQKDKAVSNLTRGIEGLFKKNKVTYVKG-YGKFISPSEVSVDTIEGGNTVVKGKNIIIATGSDVKS 190 (477)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-~~~~~~~~~~~v~~~~g~~~~i~~d~lvlAtG~~~~~ 190 (477)
..+.+.+.+.+++.+++++.+ .+..++.+.+.+...+|+..++.+|.||+|+|.+|..
T Consensus 212 ----------~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~v~v~~~~G~~~~i~~D~vv~a~G~~p~~ 270 (458)
T 1lvl_A 212 ----------SELTAPVAESLKKLGIALHLGHSVEGYENGCLLANDGKGGQLRLEADRVLVAVGRRPRT 270 (458)
T ss_dssp ----------HHHHHHHHHHHHHHTCEEETTCEEEEEETTEEEEECSSSCCCEECCSCEEECCCEEECC
T ss_pred ----------HHHHHHHHHHHHHCCCEEEECCEEEEEEeCCEEEEECCCceEEEECCEEEECcCCCcCC
Confidence 001112234455668888876 4555554445555334544679999999999998853
No 235
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=98.16 E-value=1.3e-05 Score=75.43 Aligned_cols=100 Identities=20% Similarity=0.210 Sum_probs=75.0
Q ss_pred CeeEEEcccHHHHHHHHHHHHcCCcEEEEEeCCCc----------------CCCC-----CHHHHHHHHHHHHhcCcEEE
Q 011787 215 KKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADI----------------VPSM-----DGEIRKQFQRSLEKQKMKFM 273 (477)
Q Consensus 215 ~~v~IiG~G~~g~e~a~~l~~~g~~Vtli~~~~~~----------------~~~~-----~~~~~~~~~~~l~~~gv~~~ 273 (477)
..|+|||+|+.|+.+|..+++.|.+|+++++.... .+.+ .+++...+.+.+++.++++.
T Consensus 5 yDvvIIG~GpAGl~AA~~la~~g~~v~liE~~~~gg~~~~G~~~~~~~i~~~~g~~~~i~~~~l~~~~~~~~~~~~~~~~ 84 (314)
T 4a5l_A 5 HDVVIIGSGPAAHTAAIYLGRSSLKPVMYEGFMAGGVAAGGQLTTTTIIENFPGFPNGIDGNELMMNMRTQSEKYGTTII 84 (314)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCCEEECCSSGGGCCTTCGGGGSSEECCSTTCTTCEEHHHHHHHHHHHHHHTTCEEE
T ss_pred CcEEEECCCHHHHHHHHHHHHCCCCEEEEecCCCCCcccCCCcCChHHhhhccCCcccCCHHHHHHHHHHHHhhcCcEEE
Confidence 36999999999999999999999999999875421 0112 14567777888888899887
Q ss_pred eCceEEEEEEcCCeEEEEEeecCCCceEEEEcCEEEEeecCCCCCCC
Q 011787 274 LKTKVVGVDLSGDGVKLTLEPAAGGEKTILEADVVLVSAGRTPFTAG 320 (477)
Q Consensus 274 ~~~~v~~i~~~~~~~~v~~~~~~~~~~~~i~~D~vi~a~G~~p~~~~ 320 (477)
.. .+.......+...+... ++.++.+|.+|+|||.+|....
T Consensus 85 ~~-~v~~~~~~~~~~~~~~~-----~~~~~~~~~liiATG~~~~~~~ 125 (314)
T 4a5l_A 85 TE-TIDHVDFSTQPFKLFTE-----EGKEVLTKSVIIATGATAKRMH 125 (314)
T ss_dssp CC-CEEEEECSSSSEEEEET-----TCCEEEEEEEEECCCEEECCCC
T ss_pred Ee-EEEEeecCCCceEEEEC-----CCeEEEEeEEEEcccccccccC
Confidence 54 45555555555555543 5678999999999999887654
No 236
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=98.15 E-value=5e-06 Score=82.56 Aligned_cols=101 Identities=25% Similarity=0.350 Sum_probs=69.5
Q ss_pred CCeeEEEcccHHHHHHHHHHHHc--CCcEEEEEeCCCcC------CCC------CHHHHHHHHHHH-HhcCcEEEeCceE
Q 011787 214 PKKLVVIGAGYIGLEMGSVWARL--GSEVTVVEFAADIV------PSM------DGEIRKQFQRSL-EKQKMKFMLKTKV 278 (477)
Q Consensus 214 ~~~v~IiG~G~~g~e~a~~l~~~--g~~Vtli~~~~~~~------~~~------~~~~~~~~~~~l-~~~gv~~~~~~~v 278 (477)
.++|+|||+|+.|+.+|..|++. +.+|+++++.+.+. |.+ ..++.....+.+ ++.|+++++++++
T Consensus 3 ~~~VvIIGgG~aGl~aA~~L~~~~~~~~V~vie~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~gi~v~~~~~v 82 (449)
T 3kd9_A 3 LKKVVIIGGGAAGMSAASRVKRLKPEWDVKVFEATEWVSHAPCGIPYVVEGLSTPDKLMYYPPEVFIKKRGIDLHLNAEV 82 (449)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSSCCC------------------------CTHHHHTTCEEETTCEE
T ss_pred cCcEEEECCcHHHHHHHHHHHHhCcCCCEEEEECCCccccCCcCCccccCCCCCHHHhhhcCHHHHHHhcCcEEEecCEE
Confidence 36899999999999999999998 78999999887541 111 011112222333 6789999999999
Q ss_pred EEEEEcCCeEEEEEeecCCCceEEEEcCEEEEeecCCCCCCC
Q 011787 279 VGVDLSGDGVKLTLEPAAGGEKTILEADVVLVSAGRTPFTAG 320 (477)
Q Consensus 279 ~~i~~~~~~~~v~~~~~~~~~~~~i~~D~vi~a~G~~p~~~~ 320 (477)
+.++. +...+.+. +...++.+|.+|+|+|.+|+...
T Consensus 83 ~~i~~--~~~~v~~~----~g~~~~~~d~lviAtG~~p~~p~ 118 (449)
T 3kd9_A 83 IEVDT--GYVRVREN----GGEKSYEWDYLVFANGASPQVPA 118 (449)
T ss_dssp EEECS--SEEEEECS----SSEEEEECSEEEECCCEEECCCS
T ss_pred EEEec--CCCEEEEC----CceEEEEcCEEEECCCCCCCCCC
Confidence 99843 33444432 12258999999999999887543
No 237
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=98.14 E-value=5.3e-06 Score=85.38 Aligned_cols=105 Identities=19% Similarity=0.289 Sum_probs=78.7
Q ss_pred CCeeEEEcccHHHHHHHHHHHHc--CCcEEEEEeCCCcC-----------CCC-C--HHHHHHHHHHHHhcCcEEEeCce
Q 011787 214 PKKLVVIGAGYIGLEMGSVWARL--GSEVTVVEFAADIV-----------PSM-D--GEIRKQFQRSLEKQKMKFMLKTK 277 (477)
Q Consensus 214 ~~~v~IiG~G~~g~e~a~~l~~~--g~~Vtli~~~~~~~-----------~~~-~--~~~~~~~~~~l~~~gv~~~~~~~ 277 (477)
.++|+|||||+.|+.+|..|++. |.+|+++++.+.+. ..+ + ..+...+....++.|++++++++
T Consensus 36 ~~~VvIIGgG~AGl~aA~~L~~~~~g~~V~vie~~~~~~~~~~~lp~~~~g~~~~~~~~~~~~~~~~~~~~gi~v~~~~~ 115 (588)
T 3ics_A 36 SRKIVVVGGVAGGASVAARLRRLSEEDEIIMVERGEYISFANCGLPYYIGGVITERQKLLVQTVERMSKRFNLDIRVLSE 115 (588)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCSSSEEEEECSSSCSSBCGGGHHHHHTTSSCCGGGGBSSCHHHHHHHTTCEEECSEE
T ss_pred CCCEEEECCcHHHHHHHHHHHhhCcCCCEEEEECCCCccccCCCCchhhcCcCCChHHhhccCHHHHHHhcCcEEEECCE
Confidence 57899999999999999999998 88999999988641 010 1 11223345556678999999999
Q ss_pred EEEEEEcCCeEEEEEeecCCCceEEEEcCEEEEeecCCCCCCC
Q 011787 278 VVGVDLSGDGVKLTLEPAAGGEKTILEADVVLVSAGRTPFTAG 320 (477)
Q Consensus 278 v~~i~~~~~~~~v~~~~~~~~~~~~i~~D~vi~a~G~~p~~~~ 320 (477)
|++++.+++.+.+.. ..+++...+.+|.+|+|+|.+|....
T Consensus 116 V~~id~~~~~v~v~~--~~~g~~~~~~~d~lviAtG~~p~~p~ 156 (588)
T 3ics_A 116 VVKINKEEKTITIKN--VTTNETYNEAYDVLILSPGAKPIVPS 156 (588)
T ss_dssp EEEEETTTTEEEEEE--TTTCCEEEEECSEEEECCCEEECCCC
T ss_pred EEEEECCCCEEEEee--cCCCCEEEEeCCEEEECCCCCCCCCC
Confidence 999987777665542 22334458999999999999887643
No 238
>1i8t_A UDP-galactopyranose mutase; rossman fold, FAD, contractase, isomerase; HET: FAD; 2.40A {Escherichia coli} SCOP: c.4.1.3 d.16.1.7
Probab=98.14 E-value=1.3e-06 Score=84.32 Aligned_cols=42 Identities=33% Similarity=0.488 Sum_probs=39.0
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCeEEEEecCCCCCceeec
Q 011787 43 ENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGALGGTCLN 84 (477)
Q Consensus 43 ~~dvvIIGgG~AGl~aA~~l~~~g~~V~lie~~~~~GG~~~~ 84 (477)
++|++|||||++|+++|..|++.|.+|+|+|+++.+||.|..
T Consensus 1 ~~~v~iiG~G~~Gl~~A~~l~~~g~~v~v~E~~~~~GG~~~~ 42 (367)
T 1i8t_A 1 MYDYIIVGSGLFGAVCANELKKLNKKVLVIEKRNHIGGNAYT 42 (367)
T ss_dssp CEEEEEECCSHHHHHHHHHHGGGTCCEEEECSSSSSSGGGCE
T ss_pred CCCEEEECcCHHHHHHHHHHHhCCCcEEEEecCCCCCcceEe
Confidence 379999999999999999999999999999999999998754
No 239
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=98.13 E-value=1.7e-05 Score=76.90 Aligned_cols=97 Identities=12% Similarity=0.149 Sum_probs=69.6
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCeEEEEecCCCCCceeeccCccCchhhhhhhHHHHHHHhhhhhCCccccccccChH
Q 011787 43 ENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSVEVDLP 122 (477)
Q Consensus 43 ~~dvvIIGgG~AGl~aA~~l~~~g~~V~lie~~~~~GG~~~~~~~~p~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 122 (477)
..+++|||||+.|+.+|..|++.|.+|+++|+.+.+.... .+
T Consensus 145 ~~~v~ViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~~~~~-----~~--------------------------------- 186 (384)
T 2v3a_A 145 KRRVLLLGAGLIGCEFANDLSSGGYQLDVVAPCEQVMPGL-----LH--------------------------------- 186 (384)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSSTTT-----SC---------------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCeEEEEecCcchhhcc-----cC---------------------------------
Confidence 4689999999999999999999999999999855431100 00
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhCCeEEEEeE-EEEe--cCCEEEEEecCCceEEEEecEEEEccCCCCC
Q 011787 123 AMMAQKDKAVSNLTRGIEGLFKKNKVTYVKGY-GKFI--SPSEVSVDTIEGGNTVVKGKNIIIATGSDVK 189 (477)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~--~~~~~~v~~~~g~~~~i~~d~lvlAtG~~~~ 189 (477)
..+...+.+.+++.+++++.+. +..+ +.+.+.+.+.+| .++.+|.||+|+|.+|.
T Consensus 187 ----------~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~~~v~~~~g--~~i~~d~vv~a~G~~p~ 244 (384)
T 2v3a_A 187 ----------PAAAKAVQAGLEGLGVRFHLGPVLASLKKAGEGLEAHLSDG--EVIPCDLVVSAVGLRPR 244 (384)
T ss_dssp ----------HHHHHHHHHHHHTTTCEEEESCCEEEEEEETTEEEEEETTS--CEEEESEEEECSCEEEC
T ss_pred ----------HHHHHHHHHHHHHcCCEEEeCCEEEEEEecCCEEEEEECCC--CEEECCEEEECcCCCcC
Confidence 0011223345567789988773 4444 344567777777 67999999999998875
No 240
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=98.13 E-value=1.2e-05 Score=75.47 Aligned_cols=98 Identities=15% Similarity=0.197 Sum_probs=71.1
Q ss_pred eeEEEcccHHHHHHHHHHHHcCCcEEEEEeCCC---c--------CCCC----CHHHHHHHHHHHHhcCcEEEeCceEEE
Q 011787 216 KLVVIGAGYIGLEMGSVWARLGSEVTVVEFAAD---I--------VPSM----DGEIRKQFQRSLEKQKMKFMLKTKVVG 280 (477)
Q Consensus 216 ~v~IiG~G~~g~e~a~~l~~~g~~Vtli~~~~~---~--------~~~~----~~~~~~~~~~~l~~~gv~~~~~~~v~~ 280 (477)
.|+|||+|+.|+.+|..+++.|.+|+++++... . .|.+ .+++.........+.+..+..+..+..
T Consensus 8 DvvIIG~GpAGl~aA~~l~~~g~~V~liE~~~~gG~~~~~~~i~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (312)
T 4gcm_A 8 DIAIIGAGPAGMTAAVYASRANLKTVMIERGIPGGQMANTEEVENFPGFEMITGPDLSTKMFEHAKKFGAVYQYGDIKSV 87 (312)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCEEEEESSCTTGGGGGCSCBCCSTTCSSBCHHHHHHHHHHHHHHTTCEEEECCCCEE
T ss_pred CEEEECCCHHHHHHHHHHHHCCCCEEEEecCCCCCeeecccccCCcCCccccchHHHHHHHHHHHhhccccccceeeeee
Confidence 589999999999999999999999999987532 0 1211 245666667777788888887766655
Q ss_pred EEEcCCeEEEEEeecCCCceEEEEcCEEEEeecCCCCCCC
Q 011787 281 VDLSGDGVKLTLEPAAGGEKTILEADVVLVSAGRTPFTAG 320 (477)
Q Consensus 281 i~~~~~~~~v~~~~~~~~~~~~i~~D~vi~a~G~~p~~~~ 320 (477)
....... .+. . ++.++.+|.+|+|||.+|....
T Consensus 88 ~~~~~~~-~~~-~-----~~~~~~~d~liiAtGs~~~~~~ 120 (312)
T 4gcm_A 88 EDKGEYK-VIN-F-----GNKELTAKAVIIATGAEYKKIG 120 (312)
T ss_dssp EECSSCE-EEE-C-----SSCEEEEEEEEECCCEEECCCC
T ss_pred eeeecce-eec-c-----CCeEEEeceeEEcccCccCcCC
Confidence 5433222 222 1 5678999999999998887643
No 241
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=98.13 E-value=1.3e-05 Score=80.00 Aligned_cols=99 Identities=18% Similarity=0.203 Sum_probs=69.3
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCeEEEEecCCCCCceeeccCccCchhhhhhhHHHHHHHhhhhhCCccccccccChH
Q 011787 43 ENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSVEVDLP 122 (477)
Q Consensus 43 ~~dvvIIGgG~AGl~aA~~l~~~g~~V~lie~~~~~GG~~~~~~~~p~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 122 (477)
..+++|||||+.|+.+|..|++.|.+|+|+|+.+.+.. . . +
T Consensus 169 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~---------~-----~-----------------------~-- 209 (464)
T 2eq6_A 169 PKRLLVIGGGAVGLELGQVYRRLGAEVTLIEYMPEILP---------Q-----G-----------------------D-- 209 (464)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSST---------T-----S-----------------------C--
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCeEEEEEcCCcccc---------c-----c-----------------------C--
Confidence 36899999999999999999999999999998543311 0 0 0
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhCCeEEEEe-EEEEec--CCEEEEEec-C--CceEEEEecEEEEccCCCCCC
Q 011787 123 AMMAQKDKAVSNLTRGIEGLFKKNKVTYVKG-YGKFIS--PSEVSVDTI-E--GGNTVVKGKNIIIATGSDVKS 190 (477)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-~~~~~~--~~~~~v~~~-~--g~~~~i~~d~lvlAtG~~~~~ 190 (477)
..+.+.+.+.+++.+++++.+ .+..++ .+.+.+... + |+..++.+|.||+|+|.+|..
T Consensus 210 ----------~~~~~~l~~~l~~~gV~i~~~~~v~~i~~~~~~~~v~~~~~~~g~~~~i~~D~vv~a~G~~p~~ 273 (464)
T 2eq6_A 210 ----------PETAALLRRALEKEGIRVRTKTKAVGYEKKKDGLHVRLEPAEGGEGEEVVVDKVLVAVGRKPRT 273 (464)
T ss_dssp ----------HHHHHHHHHHHHHTTCEEECSEEEEEEEEETTEEEEEEEETTCCSCEEEEESEEEECSCEEESC
T ss_pred ----------HHHHHHHHHHHHhcCCEEEcCCEEEEEEEeCCEEEEEEeecCCCceeEEEcCEEEECCCcccCC
Confidence 001122334566779998877 344443 344556654 5 644589999999999998853
No 242
>1c0p_A D-amino acid oxidase; alpha-beta-alpha motif, flavin containing protein, oxidoreductase; HET: FAD; 1.20A {Rhodosporidium toruloides} SCOP: c.4.1.2 d.16.1.3 PDB: 1c0i_A* 1c0l_A* 1c0k_A*
Probab=98.13 E-value=2.6e-06 Score=82.07 Aligned_cols=38 Identities=24% Similarity=0.343 Sum_probs=34.6
Q ss_pred CCCCCcEEEECCChHHHHHHHHHHHCCCeEEEEecCCC
Q 011787 40 ASDENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGA 77 (477)
Q Consensus 40 ~~~~~dvvIIGgG~AGl~aA~~l~~~g~~V~lie~~~~ 77 (477)
|+.++||+|||||++|+++|++|++.|.+|+|+|+...
T Consensus 3 m~~~~dVvVIG~Gi~Gls~A~~La~~G~~V~vle~~~~ 40 (363)
T 1c0p_A 3 MHSQKRVVVLGSGVIGLSSALILARKGYSVHILARDLP 40 (363)
T ss_dssp CCCSCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSCT
T ss_pred CCCCCCEEEECCCHHHHHHHHHHHhCCCEEEEEeccCC
Confidence 45678999999999999999999999999999999653
No 243
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=98.12 E-value=4.5e-06 Score=82.99 Aligned_cols=103 Identities=17% Similarity=0.216 Sum_probs=76.1
Q ss_pred eeEEEcccHHHHHHHHHHHHc--CCcEEEEEeCCCcC--C---------CC---CH-HHHHHHHHHHHhcCcEEEeCceE
Q 011787 216 KLVVIGAGYIGLEMGSVWARL--GSEVTVVEFAADIV--P---------SM---DG-EIRKQFQRSLEKQKMKFMLKTKV 278 (477)
Q Consensus 216 ~v~IiG~G~~g~e~a~~l~~~--g~~Vtli~~~~~~~--~---------~~---~~-~~~~~~~~~l~~~gv~~~~~~~v 278 (477)
+++|||+|+.|+.+|..|++. |.+|+++++.+.+. + .. ++ ++.....+.+++.|++++.++++
T Consensus 2 dvvIIGgG~aGl~aA~~l~~~~~g~~V~lie~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~gv~~~~~~~v 81 (452)
T 2cdu_A 2 KVIVVGCTHAGTFAVKQTIADHPDADVTAYEMNDNISFLSCGIALYLGKEIKNNDPRGLFYSSPEELSNLGANVQMRHQV 81 (452)
T ss_dssp EEEEECCSHHHHHHHHHHHHHCTTCEEEEEESSSCCCBCGGGHHHHHTTCBGGGCGGGGBSCCHHHHHHTTCEEEESEEE
T ss_pred eEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCCCCcccccchhhhcCCcccCCHHHhhhcCHHHHHHcCCEEEeCCEE
Confidence 689999999999999999998 99999999887531 0 00 11 12122345667789999999999
Q ss_pred EEEEEcCCeEEEEEeecCCCceEEEEcCEEEEeecCCCCCCC
Q 011787 279 VGVDLSGDGVKLTLEPAAGGEKTILEADVVLVSAGRTPFTAG 320 (477)
Q Consensus 279 ~~i~~~~~~~~v~~~~~~~~~~~~i~~D~vi~a~G~~p~~~~ 320 (477)
..++.+++.+.+. +..++++.++.+|.+++|+|.+|....
T Consensus 82 ~~i~~~~~~v~v~--~~~~g~~~~~~~d~lviAtGs~p~~p~ 121 (452)
T 2cdu_A 82 TNVDPETKTIKVK--DLITNEEKTEAYDKLIMTTGSKPTVPP 121 (452)
T ss_dssp EEEEGGGTEEEEE--ETTTCCEEEEECSEEEECCCEEECCCC
T ss_pred EEEEcCCCEEEEE--ecCCCceEEEECCEEEEccCCCcCCCC
Confidence 9998766665544 222233678999999999999887653
No 244
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=98.12 E-value=5e-06 Score=81.43 Aligned_cols=100 Identities=17% Similarity=0.267 Sum_probs=72.1
Q ss_pred CCeeEEEcccHHHHHHHHHHHHcCC--cEEEEEeCCCcC---CCCCHHHHHH-HHH-----HHHhcCcEEEeCceEEEEE
Q 011787 214 PKKLVVIGAGYIGLEMGSVWARLGS--EVTVVEFAADIV---PSMDGEIRKQ-FQR-----SLEKQKMKFMLKTKVVGVD 282 (477)
Q Consensus 214 ~~~v~IiG~G~~g~e~a~~l~~~g~--~Vtli~~~~~~~---~~~~~~~~~~-~~~-----~l~~~gv~~~~~~~v~~i~ 282 (477)
..+++|||+|+.|+.+|..|++.|. +|+++++.+.+. +.+.+.+... ..+ .+++.|++++.+++++.++
T Consensus 7 ~~~vvIIG~G~aGl~aA~~l~~~g~~~~V~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~v~~i~ 86 (408)
T 2gqw_A 7 KAPVVVLGAGLASVSFVAELRQAGYQGLITVVGDEAERPYDRPPLSKDFMAHGDAEKIRLDCKRAPEVEWLLGVTAQSFD 86 (408)
T ss_dssp CSSEEEECCSHHHHHHHHHHHHHTCCSCEEEEESSCSCCBCSGGGGTHHHHHCCGGGSBCCCTTSCSCEEEETCCEEEEE
T ss_pred CCcEEEECChHHHHHHHHHHHccCCCCeEEEEECCCCCcccCCCCCHHHhCCCchhhhhHHHHHHCCCEEEcCCEEEEEE
Confidence 4679999999999999999999987 499999887542 1112111110 000 3456799999999999997
Q ss_pred EcCCeEEEEEeecCCCceEEEEcCEEEEeecCCCCCCC
Q 011787 283 LSGDGVKLTLEPAAGGEKTILEADVVLVSAGRTPFTAG 320 (477)
Q Consensus 283 ~~~~~~~v~~~~~~~~~~~~i~~D~vi~a~G~~p~~~~ 320 (477)
.+... +++. +++++.+|.+|+|+|.+|+...
T Consensus 87 ~~~~~--v~~~-----~g~~~~~d~lviAtG~~~~~~~ 117 (408)
T 2gqw_A 87 PQAHT--VALS-----DGRTLPYGTLVLATGAAPRALP 117 (408)
T ss_dssp TTTTE--EEET-----TSCEEECSEEEECCCEEECCCG
T ss_pred CCCCE--EEEC-----CCCEEECCEEEECCCCCCCCCC
Confidence 65443 4433 4568999999999999887643
No 245
>2bi7_A UDP-galactopyranose mutase; FAD, flavoprotein, isomerase, lipopolysaccharide biosynthesi; HET: FAD; 2.0A {Klebsiella pneumoniae} SCOP: c.4.1.3 d.16.1.7 PDB: 2bi8_A* 1wam_A* 3inr_A* 3gf4_A* 3int_A* 3kyb_A*
Probab=98.11 E-value=2e-06 Score=83.41 Aligned_cols=42 Identities=24% Similarity=0.525 Sum_probs=39.0
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCeEEEEecCCCCCceeec
Q 011787 43 ENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGALGGTCLN 84 (477)
Q Consensus 43 ~~dvvIIGgG~AGl~aA~~l~~~g~~V~lie~~~~~GG~~~~ 84 (477)
++||+|||||++|+++|..|++.|++|+|+|+++.+||.|..
T Consensus 3 ~~~v~iiG~G~~Gl~~A~~l~~~g~~v~v~E~~~~~GG~~~~ 44 (384)
T 2bi7_A 3 SKKILIVGAGFSGAVIGRQLAEKGHQVHIIDQRDHIGGNSYD 44 (384)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSSSSGGGCE
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCcEEEEEecCCcCCcccc
Confidence 479999999999999999999999999999999999998743
No 246
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=98.11 E-value=1.1e-05 Score=80.38 Aligned_cols=103 Identities=17% Similarity=0.211 Sum_probs=74.7
Q ss_pred eeEEEcccHHHHHHHHHHHHcC-----CcEEEEEeCCCcCC---------CC----------------------------
Q 011787 216 KLVVIGAGYIGLEMGSVWARLG-----SEVTVVEFAADIVP---------SM---------------------------- 253 (477)
Q Consensus 216 ~v~IiG~G~~g~e~a~~l~~~g-----~~Vtli~~~~~~~~---------~~---------------------------- 253 (477)
+|+|||+|+.|+.+|..|++.| .+|+++++.+.+.. .+
T Consensus 32 dVvIIGaG~aGl~aA~~L~~~g~~~~~~~v~liE~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~p~~~~~~~~~l~~~~ 111 (463)
T 3s5w_A 32 DLIGVGFGPSNIALAIALQERAQAQGALEVLFLDKQGDYRWHGNTLVSQSELQISFLKDLVSLRNPTSPYSFVNYLHKHD 111 (463)
T ss_dssp SEEEECCSHHHHHHHHHHHHHHHHHCCCCEEEEESCSSCCSSGGGCCSSCBCSSCTTSSSSTTTCTTCTTSHHHHHHHTT
T ss_pred CEEEECCCHHHHHHHHHHHhcccccCcccEEEEecCCCCCCcCCCCCCCCcCCcchhhccccccCCCCCCChhHhhhhcC
Confidence 6999999999999999999999 89999998874310 00
Q ss_pred --------------CHHHHHHHHHHHHhcCcEEEeCceEEEEEEc---CCe--EEEEEeecCCCceEEEEcCEEEEeecC
Q 011787 254 --------------DGEIRKQFQRSLEKQKMKFMLKTKVVGVDLS---GDG--VKLTLEPAAGGEKTILEADVVLVSAGR 314 (477)
Q Consensus 254 --------------~~~~~~~~~~~l~~~gv~~~~~~~v~~i~~~---~~~--~~v~~~~~~~~~~~~i~~D~vi~a~G~ 314 (477)
..++.+.+....++.++++.++++|++++.. ++. +.+++.+. .+...++.+|.||+|+|.
T Consensus 112 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~~~~~V~~i~~~~~~~~~~~~~V~~~~g-~g~~~~~~~d~lVlAtG~ 190 (463)
T 3s5w_A 112 RLVDFINLGTFYPCRMEFNDYLRWVASHFQEQSRYGEEVLRIEPMLSAGQVEALRVISRNA-DGEELVRTTRALVVSPGG 190 (463)
T ss_dssp CHHHHHHHCCSCCBHHHHHHHHHHHHTTCTTTEEESEEEEEEEEEEETTEEEEEEEEEEET-TSCEEEEEESEEEECCCC
T ss_pred ceeecccccCCCCCHHHHHHHHHHHHHHcCCeEEeCCEEEEEEEecCCCceEEEEEEEecC-CCceEEEEeCEEEECCCC
Confidence 1233444555556668999999999999875 332 24544432 123348999999999999
Q ss_pred CCCCC
Q 011787 315 TPFTA 319 (477)
Q Consensus 315 ~p~~~ 319 (477)
.|...
T Consensus 191 ~p~~p 195 (463)
T 3s5w_A 191 TPRIP 195 (463)
T ss_dssp EECCC
T ss_pred CCCCc
Confidence 88754
No 247
>3nks_A Protoporphyrinogen oxidase; FAD containing protein, PPO, variegate porphyria disease, VP oxidoreductase-oxidoreductase inhibitor complex; HET: ACJ FAD; 1.90A {Homo sapiens}
Probab=98.11 E-value=1.5e-06 Score=87.01 Aligned_cols=41 Identities=32% Similarity=0.459 Sum_probs=38.1
Q ss_pred CcEEEECCChHHHHHHHHHHHCCC--eEEEEecCCCCCceeec
Q 011787 44 NDVVVIGGGPGGYVAAIKAAQLGL--KTTCIEKRGALGGTCLN 84 (477)
Q Consensus 44 ~dvvIIGgG~AGl~aA~~l~~~g~--~V~lie~~~~~GG~~~~ 84 (477)
+||+|||||++|++||++|++.|. +|+|+|+++.+||.+..
T Consensus 3 ~dVvVIGaGiaGLsaA~~L~~~G~~~~V~vlEa~~~~GG~~~t 45 (477)
T 3nks_A 3 RTVVVLGGGISGLAASYHLSRAPCPPKVVLVESSERLGGWIRS 45 (477)
T ss_dssp CEEEEECCBHHHHHHHHHHHTSSSCCEEEEECSSSSSBTTCCE
T ss_pred ceEEEECCcHHHHHHHHHHHhCCCCCcEEEEeCCCCCCCceEE
Confidence 699999999999999999999999 99999999999997643
No 248
>1k0i_A P-hydroxybenzoate hydroxylase; PHBH, FAD, P-OHB, hydrolase; HET: FAD PHB; 1.80A {Pseudomonas aeruginosa} SCOP: c.3.1.2 d.16.1.2 PDB: 1k0j_A* 1k0l_A* 1doc_A* 1d7l_A* 1dod_A* 1doe_A* 1ius_A* 1iut_A* 1iuu_A* 1iuv_A* 1iuw_A* 1iux_A* 1pxb_A* 1pxc_A* 1dob_A* 1ykj_A* 1pxa_A* 1pbe_A* 1pdh_A* 1phh_A* ...
Probab=98.11 E-value=1.6e-05 Score=77.49 Aligned_cols=103 Identities=18% Similarity=0.259 Sum_probs=76.9
Q ss_pred CeeEEEcccHHHHHHHHHHHHcCCcEEEEEeCCCc------CCC------------------------------------
Q 011787 215 KKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADI------VPS------------------------------------ 252 (477)
Q Consensus 215 ~~v~IiG~G~~g~e~a~~l~~~g~~Vtli~~~~~~------~~~------------------------------------ 252 (477)
.+|+|||||+.|+.+|..|++.|.+|+++++.+.. ...
T Consensus 3 ~dV~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~~~~~~~~g~l~~~~~~~l~~lg~~~~~~~~~~~~~~~~~~~~~~ 82 (394)
T 1k0i_A 3 TQVAIIGAGPSGLLLGQLLHKAGIDNVILERQTPDYVLGRIRAGVLEQGMVDLLREAGVDRRMARDGLVHEGVEIAFAGQ 82 (394)
T ss_dssp CSEEEECCSHHHHHHHHHHHHHTCCEEEECSSCHHHHHTCCCCCEECHHHHHHHHHTTCCHHHHHHCEEESCEEEEETTE
T ss_pred ccEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCCcccCCCceEeECHHHHHHHHHcCCcHHHHhcCCccceEEEEECCc
Confidence 36999999999999999999999999999987631 000
Q ss_pred -----------------CC-HHHHHHHHHHHHhcCcEEEeCceEEEEEEcC-CeEEEEEeecCCCceEEEEcCEEEEeec
Q 011787 253 -----------------MD-GEIRKQFQRSLEKQKMKFMLKTKVVGVDLSG-DGVKLTLEPAAGGEKTILEADVVLVSAG 313 (477)
Q Consensus 253 -----------------~~-~~~~~~~~~~l~~~gv~~~~~~~v~~i~~~~-~~~~v~~~~~~~~~~~~i~~D~vi~a~G 313 (477)
++ ..+.+.+.+.+.+.|++++++++|++++.++ +.+.+++.. ++...++.+|+||.|.|
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~g~~i~~~~~v~~i~~~~~~~~~v~~~~--~g~~~~~~a~~vV~AdG 160 (394)
T 1k0i_A 83 RRRIDLKRLSGGKTVTVYGQTEVTRDLMEAREACGATTVYQAAEVRLHDLQGERPYVTFER--DGERLRLDCDYIAGCDG 160 (394)
T ss_dssp EEEECHHHHHTSCCEEECCHHHHHHHHHHHHHHTTCEEESSCEEEEEECTTSSSCEEEEEE--TTEEEEEECSEEEECCC
T ss_pred eEEeccccccCCCceEEechHHHHHHHHHHHHhcCCeEEeceeEEEEEEecCCceEEEEec--CCcEEEEEeCEEEECCC
Confidence 01 2344556666777799999999999998753 456676632 22223799999999999
Q ss_pred CCCCCC
Q 011787 314 RTPFTA 319 (477)
Q Consensus 314 ~~p~~~ 319 (477)
..+...
T Consensus 161 ~~S~vr 166 (394)
T 1k0i_A 161 FHGISR 166 (394)
T ss_dssp TTCSTG
T ss_pred CCcHHH
Confidence 887653
No 249
>1sez_A Protoporphyrinogen oxidase, mitochondrial; FAD-binding, para-hydroxy-benzoate-hydroxylase fold (PHBH- fold), monotopic membrane-binding domain; HET: FAD OMN TON; 2.90A {Nicotiana tabacum} SCOP: c.3.1.2 d.16.1.5
Probab=98.11 E-value=2e-06 Score=86.90 Aligned_cols=43 Identities=40% Similarity=0.529 Sum_probs=38.6
Q ss_pred CCCCcEEEECCChHHHHHHHHHHHCCCeEEEEecCCCCCceee
Q 011787 41 SDENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGALGGTCL 83 (477)
Q Consensus 41 ~~~~dvvIIGgG~AGl~aA~~l~~~g~~V~lie~~~~~GG~~~ 83 (477)
...+||+|||||++|++||..|++.|++|+|+|+++.+||.+.
T Consensus 11 ~~~~~v~iiG~G~~Gl~aA~~l~~~g~~v~v~E~~~~~GG~~~ 53 (504)
T 1sez_A 11 SSAKRVAVIGAGVSGLAAAYKLKIHGLNVTVFEAEGKAGGKLR 53 (504)
T ss_dssp --CCEEEEECCSHHHHHHHHHHHTTSCEEEEECSSSSSCSSCC
T ss_pred CCCCeEEEECCCHHHHHHHHHHHHCCCcEEEEEeCCCCCCcee
Confidence 3468999999999999999999999999999999999999753
No 250
>3p1w_A Rabgdi protein; GDI RAB, malaria, structural genomics consortium, SGC, trans PF10_0345, protein transport; 1.85A {Plasmodium falciparum 3D7}
Probab=98.09 E-value=2.2e-06 Score=84.67 Aligned_cols=56 Identities=23% Similarity=0.295 Sum_probs=44.6
Q ss_pred HHHHHHHHHHHHhcCcEEEeCceEEEEEE-cCCeEE-EEEeecCCCceEEEEcCEEEEeecCC
Q 011787 255 GEIRKQFQRSLEKQKMKFMLKTKVVGVDL-SGDGVK-LTLEPAAGGEKTILEADVVLVSAGRT 315 (477)
Q Consensus 255 ~~~~~~~~~~l~~~gv~~~~~~~v~~i~~-~~~~~~-v~~~~~~~~~~~~i~~D~vi~a~G~~ 315 (477)
.++.+.+.+.+++.|++++++++|++|.. +++++. +++. +++++.||.||.+.++.
T Consensus 256 ~~L~~aL~r~~~~~Gg~i~l~t~V~~I~~d~~g~v~gV~~~-----~G~~i~Ad~VI~a~~~~ 313 (475)
T 3p1w_A 256 GGIPEGFSRMCAINGGTFMLNKNVVDFVFDDDNKVCGIKSS-----DGEIAYCDKVICDPSYV 313 (475)
T ss_dssp THHHHHHHHHHHHC--CEESSCCEEEEEECTTSCEEEEEET-----TSCEEEEEEEEECGGGC
T ss_pred HHHHHHHHHHHHHcCCEEEeCCeEEEEEEecCCeEEEEEEC-----CCcEEECCEEEECCCcc
Confidence 47888899999999999999999999987 555543 5543 45689999999999988
No 251
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=98.08 E-value=1.1e-05 Score=80.07 Aligned_cols=104 Identities=20% Similarity=0.305 Sum_probs=75.4
Q ss_pred CeeEEEcccHHHHHHHHHHHHc--CCcEEEEEeCCCcC--C---------CC-C-HHHHHHHHHHHHhcCcEEEeCceEE
Q 011787 215 KKLVVIGAGYIGLEMGSVWARL--GSEVTVVEFAADIV--P---------SM-D-GEIRKQFQRSLEKQKMKFMLKTKVV 279 (477)
Q Consensus 215 ~~v~IiG~G~~g~e~a~~l~~~--g~~Vtli~~~~~~~--~---------~~-~-~~~~~~~~~~l~~~gv~~~~~~~v~ 279 (477)
++++|||+|+.|+.+|..+++. |.+|+++++.+.+. + .. + .++.....+.+++.|++++.++.+.
T Consensus 1 ~dvvIIG~G~aGl~aA~~l~~~~~g~~V~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~~~v~ 80 (447)
T 1nhp_A 1 MKVIVLGSSHGGYEAVEELLNLHPDAEIQWYEKGDFISFLSAGMQLYLEGKVKDVNSVRYMTGEKMESRGVNVFSNTEIT 80 (447)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCTTSEEEEEESSSSSSBCGGGHHHHHTTSSCCGGGSBSCCHHHHHHTTCEEEETEEEE
T ss_pred CeEEEECCCHHHHHHHHHHHHhCcCCeEEEEECCCccCcccccchhhhcCccCCHHHhhcCCHHHHHHCCCEEEECCEEE
Confidence 3699999999999999999998 89999999887531 1 00 1 1122223456777899999999999
Q ss_pred EEEEcCCeEEEEEeecCCCceEEEEcCEEEEeecCCCCCCC
Q 011787 280 GVDLSGDGVKLTLEPAAGGEKTILEADVVLVSAGRTPFTAG 320 (477)
Q Consensus 280 ~i~~~~~~~~v~~~~~~~~~~~~i~~D~vi~a~G~~p~~~~ 320 (477)
.++.+++.+.+.. ..++...++.+|.+|+|+|.+|....
T Consensus 81 ~i~~~~~~v~~~~--~~~g~~~~~~~d~lviAtG~~p~~p~ 119 (447)
T 1nhp_A 81 AIQPKEHQVTVKD--LVSGEERVENYDKLIISPGAVPFELD 119 (447)
T ss_dssp EEETTTTEEEEEE--TTTCCEEEEECSEEEECCCEEECCCC
T ss_pred EEeCCCCEEEEEe--cCCCceEEEeCCEEEEcCCCCcCCCC
Confidence 9977666555442 11223346999999999999887653
No 252
>3lov_A Protoporphyrinogen oxidase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: FAD; 2.06A {Exiguobacterium sibiricum}
Probab=98.08 E-value=2e-06 Score=86.10 Aligned_cols=42 Identities=33% Similarity=0.476 Sum_probs=38.7
Q ss_pred CCcEEEECCChHHHHHHHHHHHCC--CeEEEEecCCCCCceeec
Q 011787 43 ENDVVVIGGGPGGYVAAIKAAQLG--LKTTCIEKRGALGGTCLN 84 (477)
Q Consensus 43 ~~dvvIIGgG~AGl~aA~~l~~~g--~~V~lie~~~~~GG~~~~ 84 (477)
++||+|||||++|++||++|++.| .+|+|+|+++.+||.+..
T Consensus 4 ~~~v~IiGaG~~Gl~~A~~L~~~g~~~~v~v~E~~~~~GG~~~~ 47 (475)
T 3lov_A 4 SKRLVIVGGGITGLAAAYYAERAFPDLNITLLEAGERLGGKVAT 47 (475)
T ss_dssp SCEEEEECCBHHHHHHHHHHHHHCTTSEEEEECSSSSSBTTCCE
T ss_pred cccEEEECCCHHHHHHHHHHHHhCCCCCEEEEECCCCCCceeEE
Confidence 589999999999999999999999 999999999999987544
No 253
>2ivd_A PPO, PPOX, protoporphyrinogen oxidase; porphyrin biosynthesis, chlorophyll biosynthesis, oxidoreductase, HAEM biosynthesis, heme biosynthesis; HET: ACJ FAD TWN; 2.3A {Myxococcus xanthus} SCOP: c.3.1.2 d.16.1.5 PDB: 2ive_A*
Probab=98.08 E-value=1.9e-06 Score=86.33 Aligned_cols=43 Identities=28% Similarity=0.432 Sum_probs=38.4
Q ss_pred CCCcEEEECCChHHHHHHHHHHHCCCeEEEEecCCCCCceeec
Q 011787 42 DENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGALGGTCLN 84 (477)
Q Consensus 42 ~~~dvvIIGgG~AGl~aA~~l~~~g~~V~lie~~~~~GG~~~~ 84 (477)
..+||+|||||++|++||..|++.|++|+|+|+++.+||.+..
T Consensus 15 ~~~~v~iiG~G~~Gl~aa~~l~~~g~~v~v~E~~~~~GGr~~t 57 (478)
T 2ivd_A 15 TGMNVAVVGGGISGLAVAHHLRSRGTDAVLLESSARLGGAVGT 57 (478)
T ss_dssp --CCEEEECCBHHHHHHHHHHHTTTCCEEEECSSSSSBTTCCE
T ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCCEEEEEcCCCCCceeee
Confidence 4589999999999999999999999999999999999997543
No 254
>1d5t_A Guanine nucleotide dissociation inhibitor; ultra-high resolution, hydrolase inhibitor; 1.04A {Bos taurus} SCOP: c.3.1.3 d.16.1.6 PDB: 1lv0_A* 1gnd_A
Probab=98.08 E-value=3e-06 Score=83.74 Aligned_cols=58 Identities=17% Similarity=0.199 Sum_probs=47.9
Q ss_pred HHHHHHHHHHHHhcCcEEEeCceEEEEEEcCCeEEEEEeecCCCceEEEEcCEEEEeecCCCC
Q 011787 255 GEIRKQFQRSLEKQKMKFMLKTKVVGVDLSGDGVKLTLEPAAGGEKTILEADVVLVSAGRTPF 317 (477)
Q Consensus 255 ~~~~~~~~~~l~~~gv~~~~~~~v~~i~~~~~~~~v~~~~~~~~~~~~i~~D~vi~a~G~~p~ 317 (477)
..+.+.+.+.+++.|++++++++|++|..+++++..... +++++.+|.||+++|..+.
T Consensus 234 ~~l~~~l~~~~~~~G~~i~~~~~V~~I~~~~~~v~~v~~-----~g~~~~ad~VV~a~~~~~~ 291 (433)
T 1d5t_A 234 GELPQGFARLSAIYGGTYMLNKPVDDIIMENGKVVGVKS-----EGEVARCKQLICDPSYVPD 291 (433)
T ss_dssp THHHHHHHHHHHHHTCCCBCSCCCCEEEEETTEEEEEEE-----TTEEEECSEEEECGGGCGG
T ss_pred HHHHHHHHHHHHHcCCEEECCCEEEEEEEeCCEEEEEEE-----CCeEEECCEEEECCCCCcc
Confidence 477888888888899999999999999887777664333 4578999999999998874
No 255
>2qa2_A CABE, polyketide oxygenase CABE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 2.70A {Streptomyces}
Probab=98.07 E-value=4.2e-05 Score=76.82 Aligned_cols=101 Identities=19% Similarity=0.221 Sum_probs=79.1
Q ss_pred CCeeEEEcccHHHHHHHHHHHHcCCcEEEEEeCCCcCCC-----------------------------------------
Q 011787 214 PKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIVPS----------------------------------------- 252 (477)
Q Consensus 214 ~~~v~IiG~G~~g~e~a~~l~~~g~~Vtli~~~~~~~~~----------------------------------------- 252 (477)
..+|+|||+|+.|+-+|..|++.|.+|+++++.+.+...
T Consensus 12 ~~dVlIVGaGpaGl~~A~~La~~G~~v~vlE~~~~~~~~~r~~~l~~~~~~~l~~lGl~~~~~~~~~~~~~~~~~~~~~~ 91 (499)
T 2qa2_A 12 DASVIVVGAGPAGLMLAGELRLGGVDVMVLEQLPQRTGESRGLGFTARTMEVFDQRGILPAFGPVETSTQGHFGGRPVDF 91 (499)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEEESCSSCCCCCCSEEECHHHHHHHHHTTCGGGGCSCCEESEEEETTEEEEG
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCceeEECHHHHHHHHHCCCHHHHHhccccccceecceeccc
Confidence 457999999999999999999999999999986543100
Q ss_pred ------C-------CHHHHHHHHHHHHhcCcEEEeCceEEEEEEcCCeEEEEEeecCCCceEEEEcCEEEEeecCCC
Q 011787 253 ------M-------DGEIRKQFQRSLEKQKMKFMLKTKVVGVDLSGDGVKLTLEPAAGGEKTILEADVVLVSAGRTP 316 (477)
Q Consensus 253 ------~-------~~~~~~~~~~~l~~~gv~~~~~~~v~~i~~~~~~~~v~~~~~~~~~~~~i~~D~vi~a~G~~p 316 (477)
. ...+.+.+.+.+++.|+++++++++++++.+++++.+++.+. ++ ..++.+|+||.|.|...
T Consensus 92 ~~~~~~~~~~~~i~~~~l~~~L~~~~~~~gv~v~~~~~v~~i~~~~~~v~v~~~~~-~g-~~~~~a~~vVgADG~~S 166 (499)
T 2qa2_A 92 GVLEGAHYGVKAVPQSTTESVLEEWALGRGAELLRGHTVRALTDEGDHVVVEVEGP-DG-PRSLTTRYVVGCDGGRS 166 (499)
T ss_dssp GGSTTCCCEEEEEEHHHHHHHHHHHHHHTTCEEEESCEEEEEEECSSCEEEEEECS-SC-EEEEEEEEEEECCCTTC
T ss_pred ccCCCCCCceEecCHHHHHHHHHHHHHhCCCEEEcCCEEEEEEEeCCEEEEEEEcC-CC-cEEEEeCEEEEccCccc
Confidence 0 023555666777778999999999999998888888877632 12 35799999999999654
No 256
>4dsg_A UDP-galactopyranose mutase; rossmann fold, flavin adenine dinucleotide, isomerase; HET: FAD UDP; 2.25A {Trypanosoma cruzi} PDB: 4dsh_A*
Probab=98.07 E-value=3e-06 Score=84.91 Aligned_cols=43 Identities=30% Similarity=0.449 Sum_probs=39.5
Q ss_pred CCCcEEEECCChHHHHHHHHHHHCC-CeEEEEecCCCCCceeec
Q 011787 42 DENDVVVIGGGPGGYVAAIKAAQLG-LKTTCIEKRGALGGTCLN 84 (477)
Q Consensus 42 ~~~dvvIIGgG~AGl~aA~~l~~~g-~~V~lie~~~~~GG~~~~ 84 (477)
.++||+|||||++|+++|..|++.| .+|+|+|+++.+||.+..
T Consensus 8 ~~~~v~iiG~G~~Gl~~A~~l~~~g~~~v~v~E~~~~~GG~~~~ 51 (484)
T 4dsg_A 8 LTPKIVIIGAGPTGLGAAVRLTELGYKNWHLYECNDTPGGLSRS 51 (484)
T ss_dssp CSCCEEEECCSHHHHHHHHHHHHTTCCSEEEEESSSSSSGGGCE
T ss_pred cCCCEEEECcCHHHHHHHHHHHHcCCCCEEEEeCCCCCCCeeee
Confidence 4589999999999999999999998 799999999999998754
No 257
>3ihg_A RDME; flavoenzyme, anthracycline, polyketide biosynthesis, merohedral twinning, enzyme mechanism, hydroxylase, flavoprotein; HET: FAD VAK; 2.49A {Streptomyces purpurascens}
Probab=98.06 E-value=2.7e-05 Score=79.12 Aligned_cols=100 Identities=23% Similarity=0.322 Sum_probs=79.2
Q ss_pred CeeEEEcccHHHHHHHHHHHHcCCcEEEEEeCCCcC--------------------------------------------
Q 011787 215 KKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIV-------------------------------------------- 250 (477)
Q Consensus 215 ~~v~IiG~G~~g~e~a~~l~~~g~~Vtli~~~~~~~-------------------------------------------- 250 (477)
.+|+|||||+.|+-+|..|++.|.+|+++++.+...
T Consensus 6 ~dVlIVGaG~aGl~~A~~La~~G~~v~viEr~~~~~~~~~~~~l~~~~~~~l~~lGl~~~~~~~~~~~~~~~~~~~~~~~ 85 (535)
T 3ihg_A 6 VDVLVVGAGLGGLSTAMFLARQGVRVLVVERRPGLSPYPRAAGQNPRTMELLRIGGVADEVVRADDIRGTQGDFVIRLAE 85 (535)
T ss_dssp EEEEEECCSHHHHHHHHHHHTTTCCEEEECSSSSCCCCCCSCCBCHHHHHHHHHTTCHHHHHHSCCSSCTTSCCEEEEES
T ss_pred CcEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCCCCCCccceECHHHHHHHHHcCCHHHHHhhCCCcccccceeeeEEe
Confidence 579999999999999999999999999999875320
Q ss_pred -------------------------CC----C-CHHHHHHHHHHHHhcCcEEEeCceEEEEEEcCC----eEEEEEeecC
Q 011787 251 -------------------------PS----M-DGEIRKQFQRSLEKQKMKFMLKTKVVGVDLSGD----GVKLTLEPAA 296 (477)
Q Consensus 251 -------------------------~~----~-~~~~~~~~~~~l~~~gv~~~~~~~v~~i~~~~~----~~~v~~~~~~ 296 (477)
+. + ...+...+.+.+++.|++++++++|++++.+++ ++.+++.+..
T Consensus 86 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~a~~~gv~i~~~~~v~~i~~~~~~~~~~v~v~~~~~~ 165 (535)
T 3ihg_A 86 SVRGEILRTVSESFDDMVAATEPCTPAGWAMLSQDKLEPILLAQARKHGGAIRFGTRLLSFRQHDDDAGAGVTARLAGPD 165 (535)
T ss_dssp SSSSCEEEEEESCHHHHHHTTGGGCSCCCBCCCHHHHHHHHHHHHHHTTCEEESSCEEEEEEEECGGGCSEEEEEEEETT
T ss_pred ccCCceeeeccccccccccccccCCCCcccccCHHHHHHHHHHHHHhCCCEEEeCCEEEEEEECCCCccccEEEEEEcCC
Confidence 00 0 123555667777788999999999999998887 8888776421
Q ss_pred CCceEEEEcCEEEEeecCCC
Q 011787 297 GGEKTILEADVVLVSAGRTP 316 (477)
Q Consensus 297 ~~~~~~i~~D~vi~a~G~~p 316 (477)
...++.+|+||.|.|...
T Consensus 166 --~~~~i~a~~vV~AdG~~S 183 (535)
T 3ihg_A 166 --GEYDLRAGYLVGADGNRS 183 (535)
T ss_dssp --EEEEEEEEEEEECCCTTC
T ss_pred --CeEEEEeCEEEECCCCcc
Confidence 147899999999999754
No 258
>2qa1_A PGAE, polyketide oxygenase PGAE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 1.80A {Streptomyces}
Probab=98.05 E-value=4.5e-05 Score=76.68 Aligned_cols=100 Identities=19% Similarity=0.281 Sum_probs=78.1
Q ss_pred CeeEEEcccHHHHHHHHHHHHcCCcEEEEEeCCCcCCC------------------------------------------
Q 011787 215 KKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIVPS------------------------------------------ 252 (477)
Q Consensus 215 ~~v~IiG~G~~g~e~a~~l~~~g~~Vtli~~~~~~~~~------------------------------------------ 252 (477)
.+|+|||+|+.|+-+|..|++.|.+|+++++.+.+...
T Consensus 12 ~dVlIVGaGpaGl~~A~~La~~G~~v~vlE~~~~~~~~~r~~~l~~~~~~~l~~lGl~~~~~~~~~~~~~~~~~~~~~~~ 91 (500)
T 2qa1_A 12 AAVIVVGAGPAGMMLAGELRLAGVEVVVLERLVERTGESRGLGFTARTMEVFDQRGILPRFGEVETSTQGHFGGLPIDFG 91 (500)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEEESCCC-CCCCCSEEECHHHHHHHHTTTCGGGGCSCCBCCEEEETTEEEEGG
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCCCCCCCcceECHHHHHHHHHCCCHHHHHhccccccccccceecccc
Confidence 46999999999999999999999999999986542100
Q ss_pred -CC-----------HHHHHHHHHHHHhcCcEEEeCceEEEEEEcCCeEEEEEeecCCCceEEEEcCEEEEeecCCC
Q 011787 253 -MD-----------GEIRKQFQRSLEKQKMKFMLKTKVVGVDLSGDGVKLTLEPAAGGEKTILEADVVLVSAGRTP 316 (477)
Q Consensus 253 -~~-----------~~~~~~~~~~l~~~gv~~~~~~~v~~i~~~~~~~~v~~~~~~~~~~~~i~~D~vi~a~G~~p 316 (477)
.+ ..+.+.+.+.+++.|++++++++|++++.+++++.+++.+. ++ ..++.+|+||.|.|...
T Consensus 92 ~~~~~~~~~~~i~~~~l~~~L~~~~~~~gv~v~~~~~v~~i~~~~~~v~v~~~~~-~g-~~~~~a~~vVgADG~~S 165 (500)
T 2qa1_A 92 VLEGAWQAAKTVPQSVTETHLEQWATGLGADIRRGHEVLSLTDDGAGVTVEVRGP-EG-KHTLRAAYLVGCDGGRS 165 (500)
T ss_dssp GSTTGGGCEEEEEHHHHHHHHHHHHHHTTCEEEETCEEEEEEEETTEEEEEEEET-TE-EEEEEESEEEECCCTTC
T ss_pred cCCCCCCceeecCHHHHHHHHHHHHHHCCCEEECCcEEEEEEEcCCeEEEEEEcC-CC-CEEEEeCEEEECCCcch
Confidence 00 23455566777778999999999999998888888887642 11 34799999999999654
No 259
>2iid_A L-amino-acid oxidase; flavoenzyme, FAD binding domain, reaction mechanism, sustrat binding, oxidoreductase; HET: NAG FUC PHE FAD; 1.80A {Calloselasma rhodostoma} SCOP: c.3.1.2 d.16.1.5 PDB: 1f8s_A* 1f8r_A* 1reo_A* 1tdk_A* 1tdn_A* 1tdo_A* 3kve_A* 4e0v_A*
Probab=98.05 E-value=3e-06 Score=85.41 Aligned_cols=45 Identities=31% Similarity=0.447 Sum_probs=40.4
Q ss_pred CCCCCCcEEEECCChHHHHHHHHHHHCCCeEEEEecCCCCCceee
Q 011787 39 SASDENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGALGGTCL 83 (477)
Q Consensus 39 ~~~~~~dvvIIGgG~AGl~aA~~l~~~g~~V~lie~~~~~GG~~~ 83 (477)
++...+||+|||||++|++||..|++.|.+|+|+|+++.+||.+.
T Consensus 29 ~~~~~~~v~IiGaG~~Gl~aA~~l~~~g~~v~vlE~~~~~gg~~~ 73 (498)
T 2iid_A 29 ATSNPKHVVIVGAGMAGLSAAYVLAGAGHQVTVLEASERPGGRVR 73 (498)
T ss_dssp CCSSCCEEEEECCBHHHHHHHHHHHHHTCEEEEECSSSSSBTTCC
T ss_pred CCCCCCCEEEECCCHHHHHHHHHHHhCCCeEEEEECCCCCCCcee
Confidence 344568999999999999999999999999999999999999653
No 260
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.03 E-value=1.9e-05 Score=78.59 Aligned_cols=98 Identities=23% Similarity=0.325 Sum_probs=67.7
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCeEEEEecCCCCCceeeccCccCchhhhhhhHHHHHHHhhhhhCCccccccccChH
Q 011787 43 ENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSVEVDLP 122 (477)
Q Consensus 43 ~~dvvIIGgG~AGl~aA~~l~~~g~~V~lie~~~~~GG~~~~~~~~p~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 122 (477)
..+++|||||+.|+.+|..|++.|.+|+|+++.+.+. |. ++
T Consensus 170 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l---------~~----------------------------~~-- 210 (455)
T 1ebd_A 170 PKSLVVIGGGYIGIELGTAYANFGTKVTILEGAGEIL---------SG----------------------------FE-- 210 (455)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSS---------TT----------------------------SC--
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCccc---------cc----------------------------cC--
Confidence 4789999999999999999999999999999854431 10 00
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhCCeEEEEe-EEEEec--CCEEEEEec-CCceEEEEecEEEEccCCCCC
Q 011787 123 AMMAQKDKAVSNLTRGIEGLFKKNKVTYVKG-YGKFIS--PSEVSVDTI-EGGNTVVKGKNIIIATGSDVK 189 (477)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-~~~~~~--~~~~~v~~~-~g~~~~i~~d~lvlAtG~~~~ 189 (477)
..+...+...+++.+++++.+ .+..++ .+.+.+... +|...++.+|.||+|+|.+|.
T Consensus 211 ----------~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~~~v~~~~~g~~~~~~~D~vv~a~G~~p~ 271 (455)
T 1ebd_A 211 ----------KQMAAIIKKRLKKKGVEVVTNALAKGAEEREDGVTVTYEANGETKTIDADYVLVTVGRRPN 271 (455)
T ss_dssp ----------HHHHHHHHHHHHHTTCEEEESEEEEEEEEETTEEEEEEEETTEEEEEEESEEEECSCEEES
T ss_pred ----------HHHHHHHHHHHHHCCCEEEeCCEEEEEEEeCCeEEEEEEeCCceeEEEcCEEEECcCCCcc
Confidence 001122334556779998887 344443 334555543 333468999999999999885
No 261
>3i3l_A Alkylhalidase CMLS; flavin-dependent halogenase, chloramphenicol biosynthesis, halogenation reaction, structural genomics; HET: FAD; 2.20A {Streptomyces venezuelae}
Probab=98.03 E-value=5e-05 Score=77.73 Aligned_cols=101 Identities=31% Similarity=0.385 Sum_probs=77.4
Q ss_pred CCeeEEEcccHHHHHHHHHHHHcCCcEEEEEeCCCcCC------------------------------------------
Q 011787 214 PKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIVP------------------------------------------ 251 (477)
Q Consensus 214 ~~~v~IiG~G~~g~e~a~~l~~~g~~Vtli~~~~~~~~------------------------------------------ 251 (477)
..+|+|||||+.|+-+|..|++.|.+|+++++.+....
T Consensus 23 ~~DVvIVGgG~AGl~aA~~Lar~G~~V~LiEr~~~~~~~~G~~l~p~~~~~l~~lGl~~~l~~~~~~~~~~~~~~~~~~~ 102 (591)
T 3i3l_A 23 RSKVAIIGGGPAGSVAGLTLHKLGHDVTIYERSAFPRYRVGESLLPGTMSILNRLGLQEKIDAQNYVKKPSATFLWGQDQ 102 (591)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCSSCCCCCCBCCHHHHHHHHHTTCHHHHHHHCCEEECEEEEECSSSC
T ss_pred CCCEEEECcCHHHHHHHHHHHcCCCCEEEEcCCCCCCCceeeeECHHHHHHHHHcCCcHHHHhcCCcccCCcEEEecCCC
Confidence 46899999999999999999999999999998732100
Q ss_pred ---------------------CCC-HHHHHHHHHHHHhcCcEEEeCceEEEEEEc-CCeEEEEEeecCCCceEEEEcCEE
Q 011787 252 ---------------------SMD-GEIRKQFQRSLEKQKMKFMLKTKVVGVDLS-GDGVKLTLEPAAGGEKTILEADVV 308 (477)
Q Consensus 252 ---------------------~~~-~~~~~~~~~~l~~~gv~~~~~~~v~~i~~~-~~~~~v~~~~~~~~~~~~i~~D~v 308 (477)
.++ ..+...+.+.+++.|++++.+++|+++..+ ++.+.+++.+ ++...++.+|.|
T Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~a~~~Gv~i~~g~~V~~v~~~~g~~~~V~~~~--~G~~~~i~AdlV 180 (591)
T 3i3l_A 103 APWTFSFAAPKVAPWVFDHAVQVKREEFDKLLLDEARSRGITVHEETPVTDVDLSDPDRVVLTVRR--GGESVTVESDFV 180 (591)
T ss_dssp CCEEEECCCC--CTTCCSCEEECCHHHHHHHHHHHHHHTTCEEETTCCEEEEECCSTTCEEEEEEE--TTEEEEEEESEE
T ss_pred ccceeecccccccccccCeeEEEcHHHHHHHHHHHHHhCCCEEEeCCEEEEEEEcCCCEEEEEEec--CCceEEEEcCEE
Confidence 001 235566677778899999999999999875 4456676653 233368999999
Q ss_pred EEeecCCC
Q 011787 309 LVSAGRTP 316 (477)
Q Consensus 309 i~a~G~~p 316 (477)
|.|+|..+
T Consensus 181 V~AdG~~S 188 (591)
T 3i3l_A 181 IDAGGSGG 188 (591)
T ss_dssp EECCGGGC
T ss_pred EECCCCcc
Confidence 99999765
No 262
>3fmw_A Oxygenase; mithramycin, baeyer-villiger, flavin binding protein, oxidoreductase; HET: FAD; 2.89A {Streptomyces argillaceus}
Probab=98.03 E-value=2.2e-05 Score=80.15 Aligned_cols=99 Identities=15% Similarity=0.187 Sum_probs=78.2
Q ss_pred CeeEEEcccHHHHHHHHHHHHcCCcEEEEEeCCCcC-------------------------------------C-----C
Q 011787 215 KKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIV-------------------------------------P-----S 252 (477)
Q Consensus 215 ~~v~IiG~G~~g~e~a~~l~~~g~~Vtli~~~~~~~-------------------------------------~-----~ 252 (477)
..|+|||+|+.|+-+|..|++.|.+|+++++.+... . .
T Consensus 50 ~DVvIVGaG~aGL~~A~~La~~G~~V~VlEr~~~~~~~~r~~~l~~~s~~~l~~lGl~~~l~~~~~~~~~~~~~~~~~~~ 129 (570)
T 3fmw_A 50 TDVVVVGGGPVGLMLAGELRAGGVGALVLEKLVEPVGHDRAGALHIRTVETLDLRGLLDRFLEGTQVAKGLPFAGIFTQG 129 (570)
T ss_dssp -CEEEECCSHHHHHHHHHHHHTTCCEEEEBSCSSCCCSSSCCCBCHHHHHHHHTTTCHHHHTTSCCBCSBCCBTTBCTTC
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCCEEEEcCCCCCCCCceEEEECHHHHHHHHHcCChHHHHhcCcccCCceeCCccccc
Confidence 469999999999999999999999999999754321 0 0
Q ss_pred C----------------CHHHHHHHHHHHHhcCcEEEeCceEEEEEEcCCeEEEEEeecCCCce-EEEEcCEEEEeecCC
Q 011787 253 M----------------DGEIRKQFQRSLEKQKMKFMLKTKVVGVDLSGDGVKLTLEPAAGGEK-TILEADVVLVSAGRT 315 (477)
Q Consensus 253 ~----------------~~~~~~~~~~~l~~~gv~~~~~~~v~~i~~~~~~~~v~~~~~~~~~~-~~i~~D~vi~a~G~~ 315 (477)
+ ...+.+.+.+.+++.|++++++++|++++.+++++.+++.. .++ +++.+|+||.|.|..
T Consensus 130 ~~~~~~~~~~~~~~~i~~~~l~~~L~~~a~~~gv~i~~~~~v~~l~~~~~~v~v~~~~---~~G~~~~~a~~vV~ADG~~ 206 (570)
T 3fmw_A 130 LDFGLVDTRHPYTGLVPQSRTEALLAEHAREAGAEIPRGHEVTRLRQDAEAVEVTVAG---PSGPYPVRARYGVGCDGGR 206 (570)
T ss_dssp CBGGGSCCSCCSBBCCCHHHHHHHHHHHHHHHTEECCBSCEEEECCBCSSCEEEEEEE---TTEEEEEEESEEEECSCSS
T ss_pred ccccccCCCCCeeEEeCHHHHHHHHHHHHHhCCCEEEeCCEEEEEEEcCCeEEEEEEe---CCCcEEEEeCEEEEcCCCC
Confidence 0 12456667777777899999999999999888888887742 145 689999999999965
Q ss_pred C
Q 011787 316 P 316 (477)
Q Consensus 316 p 316 (477)
.
T Consensus 207 S 207 (570)
T 3fmw_A 207 S 207 (570)
T ss_dssp C
T ss_pred c
Confidence 3
No 263
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=98.03 E-value=6.9e-06 Score=82.51 Aligned_cols=103 Identities=18% Similarity=0.239 Sum_probs=76.4
Q ss_pred CCeeEEEcccHHHHHHHHHHHHcC---CcEEEEEeCCCcC--C---------C-C-CHHHHHHHHHHHHhcCcEEEeCce
Q 011787 214 PKKLVVIGAGYIGLEMGSVWARLG---SEVTVVEFAADIV--P---------S-M-DGEIRKQFQRSLEKQKMKFMLKTK 277 (477)
Q Consensus 214 ~~~v~IiG~G~~g~e~a~~l~~~g---~~Vtli~~~~~~~--~---------~-~-~~~~~~~~~~~l~~~gv~~~~~~~ 277 (477)
..+++|||+|+.|+.+|..|++.| .+|+++++.+.+. + . . ..++.....+.+++.|++++.+++
T Consensus 35 ~~dvvIIGaG~aGl~aA~~l~~~g~~~~~V~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~v~~~~~ 114 (490)
T 2bc0_A 35 GSKIVVVGANHAGTACIKTMLTNYGDANEIVVFDQNSNISFLGAGMALWIGEQIAGPEGLFYSDKEELESLGAKVYMESP 114 (490)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHHGGGSEEEEECSSSCCSBCGGGHHHHHTTSSSCSGGGBSCCHHHHHHTTCEEETTCC
T ss_pred CCcEEEECCCHHHHHHHHHHHhcCCCCCeEEEEECCCCCCccccccchhhcCccCCHHHhhhcCHHHHHhCCCEEEeCCE
Confidence 368999999999999999999987 8999999877431 1 0 0 112211224566778999999999
Q ss_pred EEEEEEcCCeEEEEEeecCCCceEEEEcCEEEEeecCCCCCCC
Q 011787 278 VVGVDLSGDGVKLTLEPAAGGEKTILEADVVLVSAGRTPFTAG 320 (477)
Q Consensus 278 v~~i~~~~~~~~v~~~~~~~~~~~~i~~D~vi~a~G~~p~~~~ 320 (477)
+..++.+++.+.+.. ++++.++.+|.+|+|+|.+|....
T Consensus 115 v~~i~~~~~~v~v~~----~g~~~~~~~d~lviAtG~~p~~p~ 153 (490)
T 2bc0_A 115 VQSIDYDAKTVTALV----DGKNHVETYDKLIFATGSQPILPP 153 (490)
T ss_dssp EEEEETTTTEEEEEE----TTEEEEEECSEEEECCCEEECCCS
T ss_pred EEEEECCCCEEEEEe----CCcEEEEECCEEEECCCCCcCCCC
Confidence 999987666655532 123568999999999999887653
No 264
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=98.03 E-value=2.3e-05 Score=78.51 Aligned_cols=99 Identities=17% Similarity=0.269 Sum_probs=68.6
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCeEEEEecCCCCCceeeccCccCchhhhhhhHHHHHHHhhhhhCCccccccccChH
Q 011787 43 ENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSVEVDLP 122 (477)
Q Consensus 43 ~~dvvIIGgG~AGl~aA~~l~~~g~~V~lie~~~~~GG~~~~~~~~p~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 122 (477)
..+++|||||+.|+.+|..|++.|.+|+|+++.+.+... . +
T Consensus 183 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~------~-------------------------------~-- 223 (478)
T 1v59_A 183 PKRLTIIGGGIIGLEMGSVYSRLGSKVTVVEFQPQIGAS------M-------------------------------D-- 223 (478)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSSS------S-------------------------------C--
T ss_pred CceEEEECCCHHHHHHHHHHHHcCCEEEEEEeCCccccc------c-------------------------------C--
Confidence 468999999999999999999999999999986543210 0 0
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhCCeEEEEe-EEEEec----CCEEEEEec---CCceEEEEecEEEEccCCCCCC
Q 011787 123 AMMAQKDKAVSNLTRGIEGLFKKNKVTYVKG-YGKFIS----PSEVSVDTI---EGGNTVVKGKNIIIATGSDVKS 190 (477)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-~~~~~~----~~~~~v~~~---~g~~~~i~~d~lvlAtG~~~~~ 190 (477)
..+...+...+++.+++++.+ .+..++ .+...+... +|...++.+|.||+|+|.+|..
T Consensus 224 ----------~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~~~~~v~~~~~~~g~~~~~~~D~vv~a~G~~p~~ 289 (478)
T 1v59_A 224 ----------GEVAKATQKFLKKQGLDFKLSTKVISAKRNDDKNVVEIVVEDTKTNKQENLEAEVLLVAVGRRPYI 289 (478)
T ss_dssp ----------HHHHHHHHHHHHHTTCEEECSEEEEEEEEETTTTEEEEEEEETTTTEEEEEEESEEEECSCEEECC
T ss_pred ----------HHHHHHHHHHHHHCCCEEEeCCEEEEEEEecCCCeEEEEEEEcCCCCceEEECCEEEECCCCCcCC
Confidence 001122334566779998877 344443 334555544 2334689999999999988853
No 265
>1y0p_A Fumarate reductase flavoprotein subunit; flavocytochrome, mesaconate, oxidoreductase; HET: HEM FAD; 1.50A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1qjd_A* 2b7s_A* 1jry_A* 2b7r_A* 1ksu_A* 1jrz_A* 1jrx_A* 1m64_A* 1p2h_A* 1p2e_A* 1kss_A* 1e39_A* 1q9i_A* 1lj1_A*
Probab=98.03 E-value=4.3e-05 Score=78.27 Aligned_cols=101 Identities=19% Similarity=0.237 Sum_probs=75.8
Q ss_pred CeeEEEcccHHHHHHHHHHHHcCCcEEEEEeCCCcCCC---------------------------------------CC-
Q 011787 215 KKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIVPS---------------------------------------MD- 254 (477)
Q Consensus 215 ~~v~IiG~G~~g~e~a~~l~~~g~~Vtli~~~~~~~~~---------------------------------------~~- 254 (477)
.+|+|||+|..|+.+|..+++.|.+|+++++.+.+... .+
T Consensus 127 ~DVvVVGaG~aGl~aA~~la~~G~~V~vlEk~~~~gg~s~~a~gg~~~~~~~~~~~~g~~ds~~~~~~~~~~~g~~~~~~ 206 (571)
T 1y0p_A 127 VDVVVVGSGGAGFSAAISATDSGAKVILIEKEPVIGGNAKLAAGGMNAAWTDQQKAKKITDSPELMFEDTMKGGQNINDP 206 (571)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTTGGGCCSCEECSSCHHHHHTTCCCCHHHHHHHHHHHTTTCSCH
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCcEEEEeCCCCCCCchhhcCceEEeCCCHHHHHhCCCCCHHHHHHHHHHhcCCCCCH
Confidence 57999999999999999999999999999987653210 00
Q ss_pred ------------------------------------------------HHHHHHHHHHHHhcCcEEEeCceEEEEEEcC-
Q 011787 255 ------------------------------------------------GEIRKQFQRSLEKQKMKFMLKTKVVGVDLSG- 285 (477)
Q Consensus 255 ------------------------------------------------~~~~~~~~~~l~~~gv~~~~~~~v~~i~~~~- 285 (477)
..+...+.+.+++.||+++++++|+++..++
T Consensus 207 ~~~~~~~~~~~~~~~~l~~~Gv~~~~~~~~~g~~~~r~~~~~~g~~~g~~l~~~L~~~~~~~gv~i~~~~~v~~l~~~~~ 286 (571)
T 1y0p_A 207 ALVKVLSSHSKDSVDWMTAMGADLTDVGMMGGASVNRAHRPTGGAGVGAHVVQVLYDNAVKRNIDLRMNTRGIEVLKDDK 286 (571)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCCCCEEECCTTCSSCCEEESTTTCCHHHHHHHHHHHHHHHTTCEEESSEEEEEEEECTT
T ss_pred HHHHHHHHccHHHHHHHHhcCCCCccCcccCCcCCCeeEecCCCCCCHHHHHHHHHHHHHhcCCEEEeCCEeeEeEEcCC
Confidence 1334455667778899999999999998766
Q ss_pred CeEE-EEEeecCCCceEEEEcCEEEEeecCCC
Q 011787 286 DGVK-LTLEPAAGGEKTILEADVVLVSAGRTP 316 (477)
Q Consensus 286 ~~~~-v~~~~~~~~~~~~i~~D~vi~a~G~~p 316 (477)
+++. +.+.+ .++...++.+|.||+|+|...
T Consensus 287 g~v~Gv~~~~-~~g~~~~i~a~~VVlAtGg~~ 317 (571)
T 1y0p_A 287 GTVKGILVKG-MYKGYYWVKADAVILATGGFA 317 (571)
T ss_dssp SCEEEEEEEE-TTTEEEEEECSEEEECCCCCT
T ss_pred CeEEEEEEEe-CCCcEEEEECCeEEEeCCCcc
Confidence 5544 55442 123334799999999999754
No 266
>3ces_A MNMG, tRNA uridine 5-carboxymethylaminomethyl modificat GIDA, GIDA; tRNA modification, FAD binding domain, structural genomics; 2.41A {Escherichia coli} PDB: 3cp2_A 3g05_A
Probab=98.00 E-value=3.9e-05 Score=78.25 Aligned_cols=98 Identities=19% Similarity=0.270 Sum_probs=73.3
Q ss_pred CeeEEEcccHHHHHHHHHHHHcCCcEEEEEeCCC-cC--C---------------------C------------------
Q 011787 215 KKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAAD-IV--P---------------------S------------------ 252 (477)
Q Consensus 215 ~~v~IiG~G~~g~e~a~~l~~~g~~Vtli~~~~~-~~--~---------------------~------------------ 252 (477)
-.|+|||||+.|+++|..+++.|.+|.++++... +. + .
T Consensus 29 yDVIVIGgG~AGl~AAlaLAr~G~kVlLIEk~~~~iG~~~Cnps~ggia~~~lv~ei~algg~~~~~~d~~gi~f~~l~~ 108 (651)
T 3ces_A 29 FDVIIIGGGHAGTEAAMAAARMGQQTLLLTHNIDTLGQMSCNPAIGGIGKGHLVKEVDALGGLMAKAIDQAGIQFRILNA 108 (651)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTTCCSSSSEEESTTHHHHHHHHHHTTCSHHHHHHHHEEEEEEEST
T ss_pred CCEEEECChHHHHHHHHHHHhCCCCEEEEeecccccccccccccccchhhHHHHHHHHHhccHHHHHhhhcccchhhhhc
Confidence 4799999999999999999999999999998631 10 0 0
Q ss_pred ------------CC-HHHHHHHHHHHHh-cCcEEEeCceEEEEEEcCCeE-EEEEeecCCCceEEEEcCEEEEeecCCCC
Q 011787 253 ------------MD-GEIRKQFQRSLEK-QKMKFMLKTKVVGVDLSGDGV-KLTLEPAAGGEKTILEADVVLVSAGRTPF 317 (477)
Q Consensus 253 ------------~~-~~~~~~~~~~l~~-~gv~~~~~~~v~~i~~~~~~~-~v~~~~~~~~~~~~i~~D~vi~a~G~~p~ 317 (477)
.| ..+...+.+.+++ .|++++ +++|+.+..+++.+ .+.+. ++..+.+|.||+|+|..++
T Consensus 109 ~kgpav~~~r~~~Dr~~~~~~L~e~Le~~~GV~I~-~~~V~~L~~e~g~V~GV~t~-----dG~~I~Ad~VVLATGt~s~ 182 (651)
T 3ces_A 109 SKGPAVRATRAQADRVLYRQAVRTALENQPNLMIF-QQAVEDLIVENDRVVGAVTQ-----MGLKFRAKAVVLTVGTFLD 182 (651)
T ss_dssp TSCGGGCEEEEEECHHHHHHHHHHHHHTCTTEEEE-ECCEEEEEESSSBEEEEEET-----TSEEEEEEEEEECCSTTTC
T ss_pred ccCcccccchhhCCHHHHHHHHHHHHHhCCCCEEE-EEEEEEEEecCCEEEEEEEC-----CCCEEECCEEEEcCCCCcc
Confidence 01 1244556667777 699994 67999998776665 35543 4578999999999998765
Q ss_pred C
Q 011787 318 T 318 (477)
Q Consensus 318 ~ 318 (477)
.
T Consensus 183 ~ 183 (651)
T 3ces_A 183 G 183 (651)
T ss_dssp C
T ss_pred C
Confidence 3
No 267
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=98.00 E-value=3.6e-05 Score=76.67 Aligned_cols=98 Identities=15% Similarity=0.145 Sum_probs=68.8
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCeEEEEecCCCCCceeeccCccCchhhhhhhHHHHHHHhhhhhCCccccccccChH
Q 011787 43 ENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSVEVDLP 122 (477)
Q Consensus 43 ~~dvvIIGgG~AGl~aA~~l~~~g~~V~lie~~~~~GG~~~~~~~~p~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 122 (477)
..+++|||||+.|+.+|..|++.|.+|+++++.+.+. +. ++
T Consensus 166 ~~~vvVvGgG~~g~e~A~~l~~~G~~Vtlv~~~~~~l---------~~----------------------------~~-- 206 (463)
T 2r9z_A 166 PKRVAIIGAGYIGIELAGLLRSFGSEVTVVALEDRLL---------FQ----------------------------FD-- 206 (463)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSS---------TT----------------------------SC--
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCEEEEEEcCCccc---------cc----------------------------cC--
Confidence 3689999999999999999999999999999854321 00 00
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhCCeEEEEeE-EEEec--CCEEEEEecCCceEEEEecEEEEccCCCCCC
Q 011787 123 AMMAQKDKAVSNLTRGIEGLFKKNKVTYVKGY-GKFIS--PSEVSVDTIEGGNTVVKGKNIIIATGSDVKS 190 (477)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~~--~~~~~v~~~~g~~~~i~~d~lvlAtG~~~~~ 190 (477)
..+...+.+.+++.+++++.+. +..++ .+...+.+.+|+. ++.+|.||+|+|.+|..
T Consensus 207 ----------~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~~~v~~~~G~~-~i~~D~vv~a~G~~p~~ 266 (463)
T 2r9z_A 207 ----------PLLSATLAENMHAQGIETHLEFAVAALERDAQGTTLVAQDGTR-LEGFDSVIWAVGRAPNT 266 (463)
T ss_dssp ----------HHHHHHHHHHHHHTTCEEESSCCEEEEEEETTEEEEEETTCCE-EEEESEEEECSCEEESC
T ss_pred ----------HHHHHHHHHHHHHCCCEEEeCCEEEEEEEeCCeEEEEEeCCcE-EEEcCEEEECCCCCcCC
Confidence 0011122345566788888763 44443 3456777778732 79999999999998853
No 268
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=97.99 E-value=1.4e-05 Score=79.31 Aligned_cols=97 Identities=19% Similarity=0.168 Sum_probs=67.9
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCeEEEEecCCCCCceeeccCccCchhhhhhhHHHHHHHhhhhhCCccccccccChH
Q 011787 43 ENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSVEVDLP 122 (477)
Q Consensus 43 ~~dvvIIGgG~AGl~aA~~l~~~g~~V~lie~~~~~GG~~~~~~~~p~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 122 (477)
..+++|||||+.|+.+|..|++.|.+|+|+++.+.+.. . ++
T Consensus 167 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~---------~----------------------------~~-- 207 (450)
T 1ges_A 167 PERVAVVGAGYIGVELGGVINGLGAKTHLFEMFDAPLP---------S----------------------------FD-- 207 (450)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSST---------T----------------------------SC--
T ss_pred CCeEEEECCCHHHHHHHHHHHhcCCEEEEEEeCCchhh---------h----------------------------hh--
Confidence 46899999999999999999999999999998543210 0 00
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhCCeEEEEe-EEEEecC---CEEEEEecCCceEEEEecEEEEccCCCCCC
Q 011787 123 AMMAQKDKAVSNLTRGIEGLFKKNKVTYVKG-YGKFISP---SEVSVDTIEGGNTVVKGKNIIIATGSDVKS 190 (477)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-~~~~~~~---~~~~v~~~~g~~~~i~~d~lvlAtG~~~~~ 190 (477)
..+...+.+.+++.+++++.+ .+..++. ....+.+.+| .++.+|.||+|+|.+|..
T Consensus 208 ----------~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~~v~~~~g--~~i~~D~vv~a~G~~p~~ 267 (450)
T 1ges_A 208 ----------PMISETLVEVMNAEGPQLHTNAIPKAVVKNTDGSLTLELEDG--RSETVDCLIWAIGREPAN 267 (450)
T ss_dssp ----------HHHHHHHHHHHHHHSCEEECSCCEEEEEECTTSCEEEEETTS--CEEEESEEEECSCEEESC
T ss_pred ----------HHHHHHHHHHHHHCCCEEEeCCEEEEEEEeCCcEEEEEECCC--cEEEcCEEEECCCCCcCC
Confidence 001112234455668888876 3444432 2366777777 579999999999998853
No 269
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=97.99 E-value=2.4e-05 Score=76.29 Aligned_cols=101 Identities=25% Similarity=0.361 Sum_probs=72.9
Q ss_pred CCeeEEEcccHHHHHHHHHHHHcCCcEEEEEeCCCcCCC-------C-CHH---H-------------------------
Q 011787 214 PKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIVPS-------M-DGE---I------------------------- 257 (477)
Q Consensus 214 ~~~v~IiG~G~~g~e~a~~l~~~g~~Vtli~~~~~~~~~-------~-~~~---~------------------------- 257 (477)
..+|+|||||+.|+.+|..|++.|.+|+++++.+.+... + +.. .
T Consensus 26 ~~dV~IVGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~~~~~g~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~~~ 105 (398)
T 2xdo_A 26 DKNVAIIGGGPVGLTMAKLLQQNGIDVSVYERDNDREARIFGGTLDLHKGSGQEAMKKAGLLQTYYDLALPMGVNIADEK 105 (398)
T ss_dssp TCEEEEECCSHHHHHHHHHHHTTTCEEEEEECSSSTTCCCCSCCEECCTTTHHHHHHHTTCHHHHHHHCBCCCEEEECSS
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCccccccCCeeeeCCccHHHHHHhcChHHHHHHhhcccceEEECCC
Confidence 468999999999999999999999999999987643210 0 000 0
Q ss_pred ---------------------HHHHHHHHHhc--CcEEEeCceEEEEEEcCCeEEEEEeecCCCceEEEEcCEEEEeecC
Q 011787 258 ---------------------RKQFQRSLEKQ--KMKFMLKTKVVGVDLSGDGVKLTLEPAAGGEKTILEADVVLVSAGR 314 (477)
Q Consensus 258 ---------------------~~~~~~~l~~~--gv~~~~~~~v~~i~~~~~~~~v~~~~~~~~~~~~i~~D~vi~a~G~ 314 (477)
...+.+.|.+. +++++++++|++++.+++++.+++. +++++.+|.||.|.|.
T Consensus 106 g~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~i~~~~~v~~i~~~~~~v~v~~~-----~g~~~~ad~vV~AdG~ 180 (398)
T 2xdo_A 106 GNILSTKNVKPENRFDNPEINRNDLRAILLNSLENDTVIWDRKLVMLEPGKKKWTLTFE-----NKPSETADLVILANGG 180 (398)
T ss_dssp SEEEEECCCGGGTTSSCCEECHHHHHHHHHHTSCTTSEEESCCEEEEEECSSSEEEEET-----TSCCEEESEEEECSCT
T ss_pred CCchhhccccccCCCCCceECHHHHHHHHHhhcCCCEEEECCEEEEEEECCCEEEEEEC-----CCcEEecCEEEECCCc
Confidence 01112222221 3578889999999888777777765 4557999999999998
Q ss_pred CCCCC
Q 011787 315 TPFTA 319 (477)
Q Consensus 315 ~p~~~ 319 (477)
.+...
T Consensus 181 ~S~vR 185 (398)
T 2xdo_A 181 MSKVR 185 (398)
T ss_dssp TCSCC
T ss_pred chhHH
Confidence 87654
No 270
>3ihm_A Styrene monooxygenase A; rossman fold, anti-parallel beta strands, dimer, cavity, oxidoreductase; 2.30A {Pseudomonas putida}
Probab=97.97 E-value=6.4e-06 Score=81.27 Aligned_cols=47 Identities=19% Similarity=0.220 Sum_probs=36.8
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCeEEEEecCC---CCCceeeccCccC
Q 011787 43 ENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRG---ALGGTCLNVGCIP 89 (477)
Q Consensus 43 ~~dvvIIGgG~AGl~aA~~l~~~g~~V~lie~~~---~~GG~~~~~~~~p 89 (477)
++||+||||||+|+++|..|++.|++|+|+|+.. ..+|.+....|.+
T Consensus 22 ~~~ViIVGaGpaGl~~A~~La~~G~~V~viE~~~~~~~~~g~~~~~~~~~ 71 (430)
T 3ihm_A 22 KKRIGIVGAGTAGLHLGLFLRQHDVDVTVYTDRKPDEYSGLRLLNTVAHN 71 (430)
T ss_dssp -CEEEEECCHHHHHHHHHHHHHTTCEEEEEESCCGGGSTTSCCCCCCCBC
T ss_pred CCCEEEECCcHHHHHHHHHHHHCCCeEEEEcCCChHhhcccccccchhcc
Confidence 3799999999999999999999999999999965 1234444444443
No 271
>3qj4_A Renalase; FAD/NAD(P)-binding rossmann fold superfamily, flavin contain oxidoreductase, monoamine oxidase, NAD, extracellular, oxidoreductase; HET: FAD; 2.50A {Homo sapiens}
Probab=97.97 E-value=2.3e-05 Score=74.76 Aligned_cols=95 Identities=14% Similarity=0.195 Sum_probs=69.1
Q ss_pred CeeEEEcccHHHHHHHHHHHH---cCCcEEEEEeCCCcCC--------------------C---CCH---HHH-------
Q 011787 215 KKLVVIGAGYIGLEMGSVWAR---LGSEVTVVEFAADIVP--------------------S---MDG---EIR------- 258 (477)
Q Consensus 215 ~~v~IiG~G~~g~e~a~~l~~---~g~~Vtli~~~~~~~~--------------------~---~~~---~~~------- 258 (477)
.+|+|||+|.+|+-+|..|++ .|.+|+++++++.+.. . .+. .+.
T Consensus 2 ~dV~IIGaG~aGl~~A~~L~~~~~~G~~V~v~Ek~~~~gg~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~~ 81 (342)
T 3qj4_A 2 AQVLIVGAGMTGSLCAALLRRQTSGPLYLAVWDKADDSGGRMTTACSPHNPQCTADLGAQYITCTPHYAKKHQRFYDELL 81 (342)
T ss_dssp EEEEEECCSHHHHHHHHHHHSCC-CCEEEEEECSSSSSCGGGCEEECSSCTTCEEESSCCCEEECSSHHHHTHHHHHHHH
T ss_pred CcEEEECCcHHHHHHHHHHHhhccCCceEEEEECCCCCccceeeeecCCCCCceEecCCceEEcCchHHHHHHHHHHHHH
Confidence 369999999999999999999 8999999997643210 0 000 111
Q ss_pred -------------------------------HHHHHHHHhcCcEEEeCceEEEEEEcCCeEEEEEeecCCCceEEEEcCE
Q 011787 259 -------------------------------KQFQRSLEKQKMKFMLKTKVVGVDLSGDGVKLTLEPAAGGEKTILEADV 307 (477)
Q Consensus 259 -------------------------------~~~~~~l~~~gv~~~~~~~v~~i~~~~~~~~v~~~~~~~~~~~~i~~D~ 307 (477)
..+....++.|++++++++|++++.+++++.+++. +++.+.+|.
T Consensus 82 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~l~~~~g~~i~~~~~V~~i~~~~~~~~v~~~-----~g~~~~ad~ 156 (342)
T 3qj4_A 82 AYGVLRPLSSPIEGMVMKEGDCNFVAPQGISSIIKHYLKESGAEVYFRHRVTQINLRDDKWEVSKQ-----TGSPEQFDL 156 (342)
T ss_dssp HTTSCEECCSCEETCCC--CCEEEECTTCTTHHHHHHHHHHTCEEESSCCEEEEEECSSSEEEEES-----SSCCEEESE
T ss_pred hCCCeecCchhhcceeccCCccceecCCCHHHHHHHHHHhcCCEEEeCCEEEEEEEcCCEEEEEEC-----CCCEEEcCE
Confidence 11122223348999999999999988888877764 345689999
Q ss_pred EEEeecC
Q 011787 308 VLVSAGR 314 (477)
Q Consensus 308 vi~a~G~ 314 (477)
||+|+..
T Consensus 157 vV~A~p~ 163 (342)
T 3qj4_A 157 IVLTMPV 163 (342)
T ss_dssp EEECSCH
T ss_pred EEECCCH
Confidence 9999873
No 272
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=97.97 E-value=3.2e-05 Score=77.10 Aligned_cols=98 Identities=23% Similarity=0.312 Sum_probs=67.6
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCeEEEEecCCCCCceeeccCccCchhhhhhhHHHHHHHhhhhhCCccccccccChH
Q 011787 43 ENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSVEVDLP 122 (477)
Q Consensus 43 ~~dvvIIGgG~AGl~aA~~l~~~g~~V~lie~~~~~GG~~~~~~~~p~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 122 (477)
..+++|||||+.|+.+|..|++.|.+|+|+++.+.+. |. ++
T Consensus 171 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l---------~~----------------------------~~-- 211 (464)
T 2a8x_A 171 PKSIIIAGAGAIGMEFGYVLKNYGVDVTIVEFLPRAL---------PN----------------------------ED-- 211 (464)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSS---------TT----------------------------SC--
T ss_pred CCeEEEECCcHHHHHHHHHHHHcCCeEEEEEcCCccc---------cc----------------------------cC--
Confidence 4689999999999999999999999999999854331 10 00
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhCCeEEEEe-EEEEec--CCEEEEEec-CCceEEEEecEEEEccCCCCC
Q 011787 123 AMMAQKDKAVSNLTRGIEGLFKKNKVTYVKG-YGKFIS--PSEVSVDTI-EGGNTVVKGKNIIIATGSDVK 189 (477)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-~~~~~~--~~~~~v~~~-~g~~~~i~~d~lvlAtG~~~~ 189 (477)
..+...+.+.+++.+++++.+ .+..+. .+.+.+... +|+..++.+|.||+|+|.+|.
T Consensus 212 ----------~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~~~v~~~~~g~~~~~~~D~vv~a~G~~p~ 272 (464)
T 2a8x_A 212 ----------ADVSKEIEKQFKKLGVTILTATKVESIADGGSQVTVTVTKDGVAQELKAEKVLQAIGFAPN 272 (464)
T ss_dssp ----------HHHHHHHHHHHHHHTCEEECSCEEEEEEECSSCEEEEEESSSCEEEEEESEEEECSCEEEC
T ss_pred ----------HHHHHHHHHHHHHcCCEEEeCcEEEEEEEcCCeEEEEEEcCCceEEEEcCEEEECCCCCcc
Confidence 001122334455668888876 344443 223555544 554568999999999999885
No 273
>3cp8_A TRNA uridine 5-carboxymethylaminomethyl modification enzyme GIDA; rossmann fold, FAD-binding domain, dinucleotide-binding motif; HET: FAD; 3.20A {Chlorobium tepidum}
Probab=97.96 E-value=5.4e-05 Score=77.17 Aligned_cols=98 Identities=19% Similarity=0.334 Sum_probs=73.3
Q ss_pred CCeeEEEcccHHHHHHHHHHHHcCCcEEEEEeCCC-cC-----C------------------C-----------------
Q 011787 214 PKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAAD-IV-----P------------------S----------------- 252 (477)
Q Consensus 214 ~~~v~IiG~G~~g~e~a~~l~~~g~~Vtli~~~~~-~~-----~------------------~----------------- 252 (477)
.-.|+|||||..|+++|..+++.|.+|.++++.+. +. + .
T Consensus 21 ~yDVIVIGgG~AGl~AAlaLAr~G~kVlLIEk~~~~iG~~~c~ps~gGia~~~lv~el~al~g~~~~~~d~~gi~f~~l~ 100 (641)
T 3cp8_A 21 MYDVIVVGAGHAGCEAALAVARGGLHCLLITSDLSAVARMSCNPAIGGVAKGQITREIDALGGEMGKAIDATGIQFRMLN 100 (641)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTTCCSSCSEEECHHHHHHHHHHHHHTCSHHHHHHHHEEEEEEEC
T ss_pred cCCEEEECccHHHHHHHHHHHHCCCcEEEEEecccccCCCccccchhhhhHHHHHHHHHhcccHHHHHHHhcCCchhhcc
Confidence 45799999999999999999999999999998631 10 0 0
Q ss_pred -------------CC-HHHHHHHHHHHHh-cCcEEEeCceEEEEEEcCCeEE-EEEeecCCCceEEEEcCEEEEeecCCC
Q 011787 253 -------------MD-GEIRKQFQRSLEK-QKMKFMLKTKVVGVDLSGDGVK-LTLEPAAGGEKTILEADVVLVSAGRTP 316 (477)
Q Consensus 253 -------------~~-~~~~~~~~~~l~~-~gv~~~~~~~v~~i~~~~~~~~-v~~~~~~~~~~~~i~~D~vi~a~G~~p 316 (477)
.| ..+...+.+.+++ .|++++ +..|+.+..+++.+. +.+. ++..+.+|.||+|+|..+
T Consensus 101 ~~kgpav~~~r~~~Dr~~l~~~L~~~l~~~~GV~I~-~~~V~~L~~d~g~V~GV~t~-----~G~~i~Ad~VVLATG~~s 174 (641)
T 3cp8_A 101 RSKGPAMHSPRAQADKTQYSLYMRRIVEHEPNIDLL-QDTVIGVSANSGKFSSVTVR-----SGRAIQAKAAILACGTFL 174 (641)
T ss_dssp SSSCTTTCEEEEEECHHHHHHHHHHHHHTCTTEEEE-ECCEEEEEEETTEEEEEEET-----TSCEEEEEEEEECCTTCB
T ss_pred cccCccccchhhhcCHHHHHHHHHHHHHhCCCCEEE-eeEEEEEEecCCEEEEEEEC-----CCcEEEeCEEEECcCCCC
Confidence 01 1344556667776 499986 558999887777765 5543 456899999999999875
Q ss_pred C
Q 011787 317 F 317 (477)
Q Consensus 317 ~ 317 (477)
+
T Consensus 175 ~ 175 (641)
T 3cp8_A 175 N 175 (641)
T ss_dssp T
T ss_pred C
Confidence 5
No 274
>3g5s_A Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TRMFO; tRNA methyltransferase FAD folate, FAD, flavoprotein; HET: MSE FAD GSH; 1.05A {Thermus thermophilus} PDB: 3g5q_A* 3g5r_A*
Probab=97.96 E-value=8e-06 Score=77.46 Aligned_cols=49 Identities=27% Similarity=0.297 Sum_probs=39.5
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCeEEEEecCCCC------CceeeccCccCch
Q 011787 43 ENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGAL------GGTCLNVGCIPSK 91 (477)
Q Consensus 43 ~~dvvIIGgG~AGl~aA~~l~~~g~~V~lie~~~~~------GG~~~~~~~~p~~ 91 (477)
++||+|||||+||+.||..|++.|.+|+|+|++... .|.+....|.|+.
T Consensus 1 m~dViVIGgG~AG~~AA~~la~~G~~V~liE~~~~~~tp~h~~d~i~eL~CnpSi 55 (443)
T 3g5s_A 1 MERVNVVGAGLAGSEAAWTLLRLGVPVRLFEMRPKRMTPAHGTDRFAEIVCSNSL 55 (443)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCCEEEECCTTTSCCSSCCSSCTTCCCSCCEE
T ss_pred CCCEEEECchHHHHHHHHHHHHCCCcEEEEeccCCcCCccccCCCccccccCcCC
Confidence 379999999999999999999999999999987632 2444555566654
No 275
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.96 E-value=3.8e-05 Score=77.31 Aligned_cols=97 Identities=15% Similarity=0.198 Sum_probs=68.9
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCeEEEEecCCCCCceeeccCccCchhhhhhhHHHHHHHhhhhhCCccccccccChH
Q 011787 43 ENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSVEVDLP 122 (477)
Q Consensus 43 ~~dvvIIGgG~AGl~aA~~l~~~g~~V~lie~~~~~GG~~~~~~~~p~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 122 (477)
..+++|||||+.|+.+|..|++.|.+|+++++.+.+. |. ++
T Consensus 176 ~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l---------~~----------------------------~d-- 216 (500)
T 1onf_A 176 SKKIGIVGSGYIAVELINVIKRLGIDSYIFARGNRIL---------RK----------------------------FD-- 216 (500)
T ss_dssp CSEEEEECCSHHHHHHHHHHHTTTCEEEEECSSSSSC---------TT----------------------------SC--
T ss_pred CCeEEEECChHHHHHHHHHHHHcCCeEEEEecCCccC---------cc----------------------------cc--
Confidence 4689999999999999999999999999999854331 00 00
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhCCeEEEEeE-EEEecC---CEEEEEecCCceEE-EEecEEEEccCCCCCC
Q 011787 123 AMMAQKDKAVSNLTRGIEGLFKKNKVTYVKGY-GKFISP---SEVSVDTIEGGNTV-VKGKNIIIATGSDVKS 190 (477)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~~~---~~~~v~~~~g~~~~-i~~d~lvlAtG~~~~~ 190 (477)
..+...+.+.+++.+|+++.+. +..++. ....+.+.+| .+ +.+|.||+|+|.+|..
T Consensus 217 ----------~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~~~~v~~~~g--~~~~~~D~vi~a~G~~p~~ 277 (500)
T 1onf_A 217 ----------ESVINVLENDMKKNNINIVTFADVVEIKKVSDKNLSIHLSDG--RIYEHFDHVIYCVGRSPDT 277 (500)
T ss_dssp ----------HHHHHHHHHHHHHTTCEEECSCCEEEEEESSTTCEEEEETTS--CEEEEESEEEECCCBCCTT
T ss_pred ----------hhhHHHHHHHHHhCCCEEEECCEEEEEEEcCCceEEEEECCC--cEEEECCEEEECCCCCcCC
Confidence 0011223455667789988773 444432 2366777777 44 9999999999999864
No 276
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=97.96 E-value=5e-05 Score=76.67 Aligned_cols=95 Identities=16% Similarity=0.155 Sum_probs=68.6
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCeEEEEecCCCCCceeeccCccCchhhhhhhHHHHHHHhhhhhCCccccccccChH
Q 011787 43 ENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSVEVDLP 122 (477)
Q Consensus 43 ~~dvvIIGgG~AGl~aA~~l~~~g~~V~lie~~~~~GG~~~~~~~~p~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 122 (477)
..+++|||||+.|+..|..+++.|.+|+|+++...+-+ ++
T Consensus 223 P~~lvIIGgG~IGlE~A~~~~~lG~~VTii~~~~~L~~--------------------------------------~D-- 262 (542)
T 4b1b_A 223 PGKTLVVGASYVALECSGFLNSLGYDVTVAVRSIVLRG--------------------------------------FD-- 262 (542)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHHTCCEEEEESSCSSTT--------------------------------------SC--
T ss_pred CceEEEECCCHHHHHHHHHHHhcCCeEEEecccccccc--------------------------------------cc--
Confidence 46899999999999999999999999999987432210 00
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhCCeEEEEeE-EEE--ecCCEEEEEecCCceEEEEecEEEEccCCCCC
Q 011787 123 AMMAQKDKAVSNLTRGIEGLFKKNKVTYVKGY-GKF--ISPSEVSVDTIEGGNTVVKGKNIIIATGSDVK 189 (477)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~--~~~~~~~v~~~~g~~~~i~~d~lvlAtG~~~~ 189 (477)
..+...+...+++.++++..+. +.. .....+.+...++ ..+.+|.|++|+|-+|.
T Consensus 263 ----------~ei~~~l~~~l~~~gi~~~~~~~v~~~~~~~~~~~v~~~~~--~~~~~D~vLvAvGR~Pn 320 (542)
T 4b1b_A 263 ----------QQCAVKVKLYMEEQGVMFKNGILPKKLTKMDDKILVEFSDK--TSELYDTVLYAIGRKGD 320 (542)
T ss_dssp ----------HHHHHHHHHHHHHTTCEEEETCCEEEEEEETTEEEEEETTS--CEEEESEEEECSCEEES
T ss_pred ----------hhHHHHHHHHHHhhcceeecceEEEEEEecCCeEEEEEcCC--CeEEEEEEEEcccccCC
Confidence 0122233456677899888773 222 3456677777776 56789999999999885
No 277
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=97.96 E-value=1.2e-05 Score=80.68 Aligned_cols=105 Identities=13% Similarity=0.252 Sum_probs=74.0
Q ss_pred CeeEEEcccHHHHHHHHHHHHcCCcEEEEEeCCCcC--C--------CCCH-HHHHHHHHHH--HhcCcEEEeCceEEEE
Q 011787 215 KKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIV--P--------SMDG-EIRKQFQRSL--EKQKMKFMLKTKVVGV 281 (477)
Q Consensus 215 ~~v~IiG~G~~g~e~a~~l~~~g~~Vtli~~~~~~~--~--------~~~~-~~~~~~~~~l--~~~gv~~~~~~~v~~i 281 (477)
++|+|||||+.|+.+|..|.+.+.+||+|++++.+. | .+++ ++...+.+.+ ++.+++++. .++++|
T Consensus 43 prVVIIGgG~AGl~~A~~L~~~~~~VtLId~~~~~~~~PlL~~va~G~l~~~~i~~p~~~~~~~~~~~v~~~~-~~v~~I 121 (502)
T 4g6h_A 43 PNVLILGSGWGAISFLKHIDTKKYNVSIISPRSYFLFTPLLPSAPVGTVDEKSIIEPIVNFALKKKGNVTYYE-AEATSI 121 (502)
T ss_dssp CEEEEECSSHHHHHHHHHSCTTTCEEEEEESSSEEECGGGGGGTTTTSSCGGGGEEEHHHHHTTCSSCEEEEE-EEEEEE
T ss_pred CCEEEECCcHHHHHHHHHhhhCCCcEEEECCCCCcccccchhHHhhccccHHHhhhhHHHHHHhhcCCeEEEE-EEEEEE
Confidence 479999999999999999998899999999987541 1 1121 1111122322 234788874 578999
Q ss_pred EEcCCeEEEEEee-------------cCCCceEEEEcCEEEEeecCCCCCCC
Q 011787 282 DLSGDGVKLTLEP-------------AAGGEKTILEADVVLVSAGRTPFTAG 320 (477)
Q Consensus 282 ~~~~~~~~v~~~~-------------~~~~~~~~i~~D~vi~a~G~~p~~~~ 320 (477)
+.+...+.+.... ...+++.++++|.+|+|+|.+|+...
T Consensus 122 D~~~k~V~l~~~~~~~~~~~~~~~~~~~~~~~~~i~YD~LViAtGs~~~~~~ 173 (502)
T 4g6h_A 122 NPDRNTVTIKSLSAVSQLYQPENHLGLHQAEPAEIKYDYLISAVGAEPNTFG 173 (502)
T ss_dssp EGGGTEEEEEEEEEEEECSSSCCCCCCCTTCCEEEECSEEEECCCCEECCTT
T ss_pred EhhhCEEEEeecccceeecccccccccccCCceEEeCCEEEEcCCcccccCC
Confidence 8877776654311 11245789999999999999998754
No 278
>1qo8_A Flavocytochrome C3 fumarate reductase; oxidoreductase; HET: HEM FAD; 2.15A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1
Probab=97.95 E-value=5.4e-05 Score=77.39 Aligned_cols=102 Identities=19% Similarity=0.258 Sum_probs=75.9
Q ss_pred CeeEEEcccHHHHHHHHHHHHcCCcEEEEEeCCCcCCC---------------------------------------C--
Q 011787 215 KKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIVPS---------------------------------------M-- 253 (477)
Q Consensus 215 ~~v~IiG~G~~g~e~a~~l~~~g~~Vtli~~~~~~~~~---------------------------------------~-- 253 (477)
..|+|||+|..|+.+|..+++.|.+|+++++.+.+... .
T Consensus 122 ~DVvVVG~G~aGl~aA~~la~~G~~V~vlEk~~~~gg~s~~s~gg~~~~~~~~~~~~g~~ds~~~~~~~~~~~~~~~~~~ 201 (566)
T 1qo8_A 122 TQVLVVGAGSAGFNASLAAKKAGANVILVDKAPFSGGNSMISAGGMNAVGTKQQTAHGVEDKVEWFIEDAMKGGRQQNDI 201 (566)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHTCCEEEECSSSSSCTTGGGCCSCEECSSCHHHHHTTCCCCHHHHHHHHHHHTTTCSCH
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCcEEEEeCCCCCCCcccccCceeEccCCHHHHHhCCCCCHHHHHHHHHHhcCCCCCH
Confidence 47999999999999999999999999999987643110 0
Q ss_pred -----------------------------------------------CHHHHHHHHHHHHhcCcEEEeCceEEEEEEcC-
Q 011787 254 -----------------------------------------------DGEIRKQFQRSLEKQKMKFMLKTKVVGVDLSG- 285 (477)
Q Consensus 254 -----------------------------------------------~~~~~~~~~~~l~~~gv~~~~~~~v~~i~~~~- 285 (477)
...+...+.+.+++.|++++++++|+++..++
T Consensus 202 ~~~~~~~~~~~~~i~~l~~~Gv~~~~~~~~~g~~~~r~~~~~~~~~~~~~l~~~L~~~~~~~gv~i~~~~~v~~l~~~~~ 281 (566)
T 1qo8_A 202 KLVTILAEQSADGVQWLESLGANLDDLKRSGGARVDRTHRPHGGKSSGPEIIDTLRKAAKEQGIDTRLNSRVVKLVVNDD 281 (566)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCCCCEEECCTTCSSCCEEECSSSSCHHHHHHHHHHHHHHHTTCCEECSEEEEEEEECTT
T ss_pred HHHHHHHhccHHHHHHHHhcCCccccccccCCCCCCceeecCCCCCCHHHHHHHHHHHHHhcCCEEEeCCEEEEEEECCC
Confidence 11233455667778899999999999998776
Q ss_pred CeEE-EEEeecCCCceEEEEcCEEEEeecCCCC
Q 011787 286 DGVK-LTLEPAAGGEKTILEADVVLVSAGRTPF 317 (477)
Q Consensus 286 ~~~~-v~~~~~~~~~~~~i~~D~vi~a~G~~p~ 317 (477)
+++. +.+.+ .++....+.+|.||+|+|-...
T Consensus 282 g~v~Gv~~~~-~~g~~~~i~A~~VVlAtGg~s~ 313 (566)
T 1qo8_A 282 HSVVGAVVHG-KHTGYYMIGAKSVVLATGGYGM 313 (566)
T ss_dssp SBEEEEEEEE-TTTEEEEEEEEEEEECCCCCTT
T ss_pred CcEEEEEEEe-CCCcEEEEEcCEEEEecCCccc
Confidence 6554 55442 2233347999999999996554
No 279
>3jsk_A Cypbp37 protein; octameric thiazole synthase, biosynthetic protein; HET: AHZ; 2.70A {Neurospora crassa}
Probab=97.95 E-value=6.3e-05 Score=70.78 Aligned_cols=163 Identities=15% Similarity=0.185 Sum_probs=99.6
Q ss_pred CeeEEEcccHHHHHHHHHHHHc--CCcEEEEEeCCCcCC-------C--------------------C-----------C
Q 011787 215 KKLVVIGAGYIGLEMGSVWARL--GSEVTVVEFAADIVP-------S--------------------M-----------D 254 (477)
Q Consensus 215 ~~v~IiG~G~~g~e~a~~l~~~--g~~Vtli~~~~~~~~-------~--------------------~-----------~ 254 (477)
..|+|||+|+.|+.+|..|++. |.+|+++++.+.+.. . + .
T Consensus 80 ~DVvIVGgG~AGL~aA~~La~~~~G~~V~LiEk~~~~GGg~~~~g~~~~~~~~~~~~~~~L~~~Gv~~~~~G~~~~~~~~ 159 (344)
T 3jsk_A 80 TDIVIVGAGSCGLSAAYVLSTLRPDLRITIVEAGVAPGGGAWLGGQLFSAMVMRKPADVFLDEVGVPYEDEGDYVVVKHA 159 (344)
T ss_dssp CSEEEECCSHHHHHHHHHHHHHCTTSCEEEEESSSSCCTTTTCCBTTCCCEEEETTTHHHHHHHTCCCEECSSEEEESCH
T ss_pred CCEEEECccHHHHHHHHHHHhcCCCCEEEEEeCCCccCCccccCCccchhhhcchHHHHHHHHcCCcccccCCeEEEecH
Confidence 4799999999999999999997 999999998764320 0 0 1
Q ss_pred HHHHHHHHHHHHh-cCcEEEeCceEEEEEEcC-----------------C--eEE-EEEeec---CC------CceEEEE
Q 011787 255 GEIRKQFQRSLEK-QKMKFMLKTKVVGVDLSG-----------------D--GVK-LTLEPA---AG------GEKTILE 304 (477)
Q Consensus 255 ~~~~~~~~~~l~~-~gv~~~~~~~v~~i~~~~-----------------~--~~~-v~~~~~---~~------~~~~~i~ 304 (477)
.++.+.+.+.+++ .|++++.++.+.++..++ + ++. +.+... .. .+..++.
T Consensus 160 ~d~~~~L~~~a~~~~gV~i~~~~~V~dLi~~~d~~~~~~~~~~g~~~~~g~~rV~GVv~~~~~v~~~g~~~~~~d~~~i~ 239 (344)
T 3jsk_A 160 ALFTSTVLSKVLQRPNVKLFNATTVEDLITRKHHAESSSSSDDGEAEDEAKVRIAGVVTNWTLVSMHHDDQSAMDPNTIN 239 (344)
T ss_dssp HHHHHHHHHHHHTCTTEEEEETEEEEEEEEEEC----------------CCEEEEEEEEEEHHHHTTSSSSSCCBCEEEE
T ss_pred HHHHHHHHHHHHhCCCCEEEeCCEEEEEEecCCcccccccccccccccCCCceEeEEEeeeeeeeccCCcccccCceEEE
Confidence 2334555666666 599999999999987654 2 232 332210 11 2456899
Q ss_pred cCEEEEeecCCCCCCCCCcc---cccee--ecCCCCeecC-------CCCCCCCCCeEEecccC----CC----CCchhH
Q 011787 305 ADVVLVSAGRTPFTAGLGLD---KIGVE--TDKMGRIPVN-------ERFATNIPGVYAIGDVI----PG----PMLAHK 364 (477)
Q Consensus 305 ~D~vi~a~G~~p~~~~l~~~---~~gl~--~~~~g~i~vd-------~~l~t~~~~vya~GD~~----~~----~~~~~~ 364 (477)
++.||.|+|.....-.+..+ ..++. +......+++ ++-+--+|++|++|=.+ +. |.+..
T Consensus 240 Ak~VV~ATG~~s~v~~~~~~~l~~~~~~~~~~g~~~~~~~~~e~~~v~~t~~v~~gl~~~gm~~~~~~g~~rmgp~fg~- 318 (344)
T 3jsk_A 240 APVIISTTGHDGPFGAFSVKRLVSMKQMERLNGMRGLDMQSAEDAIVNNTREIVPGLIVGGMELSEIDGANRMGPTFGA- 318 (344)
T ss_dssp CSEEEECCCSSSSSSCHHHHHHHHTTSSSCCCCCEEECHHHHHHHHHHTCEEEETTEEECGGGHHHHHTCEECCSCCHH-
T ss_pred cCEEEECCCCCchhhHHHHHHHhhcCcccccCCCcccccccchhhhcccCceEcCCEEEechhhHhhcCCCCCCcccce-
Confidence 99999999987653211111 12221 1111111111 11112379999999876 33 33322
Q ss_pred HHHHHHHHHHHHcC
Q 011787 365 AEEDGVACVEFLAG 378 (477)
Q Consensus 365 A~~~g~~aa~~i~~ 378 (477)
=...|+.||+.|+.
T Consensus 319 m~~sg~~~a~~~~~ 332 (344)
T 3jsk_A 319 MALSGVKAAHEAIR 332 (344)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred eeecCHHHHHHHHH
Confidence 23567888877753
No 280
>2gjc_A Thiazole biosynthetic enzyme, mitochondrial; glutathione reductase type II family, thiazole synthase, mitochondria DNA repair; HET: AHZ; 1.82A {Saccharomyces cerevisiae} PDB: 3fpz_A*
Probab=97.94 E-value=0.00017 Score=67.48 Aligned_cols=163 Identities=17% Similarity=0.195 Sum_probs=99.2
Q ss_pred CeeEEEcccHHHHHHHHHHHHc--CCcEEEEEeCCCcCC-C-------------------------------------CC
Q 011787 215 KKLVVIGAGYIGLEMGSVWARL--GSEVTVVEFAADIVP-S-------------------------------------MD 254 (477)
Q Consensus 215 ~~v~IiG~G~~g~e~a~~l~~~--g~~Vtli~~~~~~~~-~-------------------------------------~~ 254 (477)
.+|+|||+|+.|+.+|..|++. |.+|+++++.+.... . ..
T Consensus 66 ~dv~IiG~G~aGl~aA~~la~~~~g~~V~v~e~~~~~ggg~~~~g~~~~~~~~~~~~~~~L~~~Gv~~~~~g~~~~~~~~ 145 (326)
T 2gjc_A 66 SDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAPGGGSWLGGQLFSAMVMRKPAHLFLQELEIPYEDEGDYVVVKHA 145 (326)
T ss_dssp ESEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSSSCCTTTTCCGGGCCCEEEETTTHHHHHHTTCCCEECSSEEEESCH
T ss_pred CCEEEECccHHHHHHHHHHHhcCCCCeEEEEecCccccccccccCcccchhhhhhHHHHHHHhhCcccccCCCeEEEcch
Confidence 4799999999999999999998 999999998665420 0 01
Q ss_pred HHHHHHHHHHHHh-cCcEEEeCceEEEEEEcC----C--eEE-EEEeec---------CCCceEEEEc------------
Q 011787 255 GEIRKQFQRSLEK-QKMKFMLKTKVVGVDLSG----D--GVK-LTLEPA---------AGGEKTILEA------------ 305 (477)
Q Consensus 255 ~~~~~~~~~~l~~-~gv~~~~~~~v~~i~~~~----~--~~~-v~~~~~---------~~~~~~~i~~------------ 305 (477)
.++...+.+.+.+ .|++++.++++.++..++ + ++. +.+... ...+...+.+
T Consensus 146 ~~~~~~L~~~a~~~~GV~i~~~~~V~~Ll~~~~~~~g~~rV~GVvv~~~~v~~~g~~~~~~d~~~I~A~G~~~~~~~~~~ 225 (326)
T 2gjc_A 146 ALFISTVLSKVLQLPNVKLFNATCVEDLVTRPPTEKGEVTVAGVVTNWTLVTQAHGTQCCMDPNVIELAGYKNDGTRDLS 225 (326)
T ss_dssp HHHHHHHHHHHHTSTTEEEETTEEEEEEEECCCC-----CEEEEEEEEHHHHTC---CCCCCCEEEEESCCCSSSCCCSS
T ss_pred HHHHHHHHHHHHHhcCcEEEecceeeeeeecccccCCCcEEEEEEecceeecccccceeccCceEEEEeecccccccccc
Confidence 2334455565666 499999999999997763 3 333 333210 1124568999
Q ss_pred ---CEEEEeecCCCCCCCCCccccceeecCCCC------eecC-------CCCCC--CCCCeEEecccC----CCCCc--
Q 011787 306 ---DVVLVSAGRTPFTAGLGLDKIGVETDKMGR------IPVN-------ERFAT--NIPGVYAIGDVI----PGPML-- 361 (477)
Q Consensus 306 ---D~vi~a~G~~p~~~~l~~~~~gl~~~~~g~------i~vd-------~~l~t--~~~~vya~GD~~----~~~~~-- 361 (477)
+.||.|+|.......+..... ..++..+. ...+ +..+. -+|++|++|-.+ +.|..
T Consensus 226 ~~~~~VV~ATG~~~~~~~~~~~~~-~~~~~~~~~~g~~~~~~~~~e~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~r~g~ 304 (326)
T 2gjc_A 226 QKHGVILSTTGHDGPFGAFCAKRI-VDIDQNQKLGGMKGLDMNHAEHDVVIHSGAYAGVDNMYFAGMEVAELDGLNRMGP 304 (326)
T ss_dssp TTCCEEEECCCCC--CCSHHHHHH-HHHHSSCCCCCCCCBCHHHHHHHHHHHCEECTTSTTEEECTHHHHHHHTCCBCCS
T ss_pred ccCCEEEECcCCCchHHHHHHhhc-cccccccccCceeccccccchhheeecCCCccccCCEEECChHHHHhcCCCCCCh
Confidence 999999998765433211111 11111111 1111 11122 689999999877 33331
Q ss_pred hhHH-HHHHHHHHHHHcC
Q 011787 362 AHKA-EEDGVACVEFLAG 378 (477)
Q Consensus 362 ~~~A-~~~g~~aa~~i~~ 378 (477)
.-.+ ...|+.||+.|+.
T Consensus 305 ~fg~m~~sg~~~a~~~~~ 322 (326)
T 2gjc_A 305 TFGAMALSGVHAAEQILK 322 (326)
T ss_dssp CCHHHHHHHHHHHHHHHH
T ss_pred hhhhhhhhhHHHHHHHHH
Confidence 1223 3567888877753
No 281
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=97.93 E-value=1.8e-05 Score=79.19 Aligned_cols=104 Identities=15% Similarity=0.177 Sum_probs=73.5
Q ss_pred CeeEEEcccHHHHHHHHHHHHc--CCcEEEEEeCCCcC--CC----------C-CHHHHHHHHHHH-HhcCcEEEeCceE
Q 011787 215 KKLVVIGAGYIGLEMGSVWARL--GSEVTVVEFAADIV--PS----------M-DGEIRKQFQRSL-EKQKMKFMLKTKV 278 (477)
Q Consensus 215 ~~v~IiG~G~~g~e~a~~l~~~--g~~Vtli~~~~~~~--~~----------~-~~~~~~~~~~~l-~~~gv~~~~~~~v 278 (477)
.+++|||+|+.|+.+|..|++. |.+|+++++.+... +. . ..++.....+.+ ++.|++++.++.+
T Consensus 37 ~dvvIIG~G~aGl~aA~~l~~~~~g~~V~lie~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gv~~~~~~~v 116 (480)
T 3cgb_A 37 MNYVIIGGDAAGMSAAMQIVRNDENANVVTLEKGEIYSYAQCGLPYVISGAIASTEKLIARNVKTFRDKYGIDAKVRHEV 116 (480)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTCEEEEECSSSCCSBCGGGHHHHHTTSSSCGGGGBSSCHHHHHHTTCCEEESSEEE
T ss_pred ceEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCCCCCCCCCcchhhcCCcCCHHHhhhcCHHHHHhhcCCEEEeCCEE
Confidence 5799999999999999999986 88999999877531 00 0 111111223444 3449999999999
Q ss_pred EEEEEcCCeEEEEEeecCCCceEEEEcCEEEEeecCCCCCCC
Q 011787 279 VGVDLSGDGVKLTLEPAAGGEKTILEADVVLVSAGRTPFTAG 320 (477)
Q Consensus 279 ~~i~~~~~~~~v~~~~~~~~~~~~i~~D~vi~a~G~~p~~~~ 320 (477)
..++.+++.+.+.. ..+++..++.+|.+|+|+|.+|+...
T Consensus 117 ~~i~~~~~~v~v~~--~~~g~~~~~~~d~lviAtG~~p~~p~ 156 (480)
T 3cgb_A 117 TKVDTEKKIVYAEH--TKTKDVFEFSYDRLLIATGVRPVMPE 156 (480)
T ss_dssp EEEETTTTEEEEEE--TTTCCEEEEECSEEEECCCEEECCCC
T ss_pred EEEECCCCEEEEEE--cCCCceEEEEcCEEEECCCCcccCCC
Confidence 99987666665542 11222237999999999999887643
No 282
>2zxi_A TRNA uridine 5-carboxymethylaminomethyl modificat MNMG; modification, 5-carboxymethylaminomethyl uridine, WOBB uridine, FAD; HET: FAD; 2.30A {Aquifex aeolicus} PDB: 2zxh_A* 2e57_A*
Probab=97.93 E-value=7.5e-05 Score=75.91 Aligned_cols=98 Identities=22% Similarity=0.320 Sum_probs=73.2
Q ss_pred CeeEEEcccHHHHHHHHHHHHcCCcEEEEEeCCC-cC--CC---------------------------------------
Q 011787 215 KKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAAD-IV--PS--------------------------------------- 252 (477)
Q Consensus 215 ~~v~IiG~G~~g~e~a~~l~~~g~~Vtli~~~~~-~~--~~--------------------------------------- 252 (477)
-.|+|||||+.|+++|..+++.|.+|.++++... +. +.
T Consensus 28 yDVIVIGgG~AGl~AAlalAr~G~kVlLIEk~~~~iG~~~Cnps~GGia~g~lv~eldalgg~~~~~~d~~gi~f~~l~~ 107 (637)
T 2zxi_A 28 FDVVVIGGGHAGIEAALAAARMGAKTAMFVLNADTIGQMSCNPAIGGIAKGIVVREIDALGGEMGKAIDQTGIQFKMLNT 107 (637)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTTCCCSCSEEECTTHHHHHHHHHHHTCSHHHHHHHHEEEEEEEST
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCCEEEEEecccccCCcCccccccccchHHHHHHHHHhhhHHHHHhhhcccceeeccc
Confidence 4699999999999999999999999999998631 10 00
Q ss_pred ------------CC-HHHHHHHHHHHHh-cCcEEEeCceEEEEEEcCCeEE-EEEeecCCCceEEEEcCEEEEeecCCCC
Q 011787 253 ------------MD-GEIRKQFQRSLEK-QKMKFMLKTKVVGVDLSGDGVK-LTLEPAAGGEKTILEADVVLVSAGRTPF 317 (477)
Q Consensus 253 ------------~~-~~~~~~~~~~l~~-~gv~~~~~~~v~~i~~~~~~~~-v~~~~~~~~~~~~i~~D~vi~a~G~~p~ 317 (477)
.| ..+...+.+.+++ .|++++ +.+|+++..+++.+. +.+. ++..+.+|.||+|+|..++
T Consensus 108 ~kGpav~~~r~~~Dr~~~~~~L~~~Le~~~GVeI~-~~~Vt~L~~e~g~V~GV~t~-----dG~~i~AdaVVLATG~~s~ 181 (637)
T 2zxi_A 108 RKGKAVQSPRAQADKKRYREYMKKVCENQENLYIK-QEEVVDIIVKNNQVVGVRTN-----LGVEYKTKAVVVTTGTFLN 181 (637)
T ss_dssp TSCGGGCEEEEEECHHHHHHHHHHHHHTCTTEEEE-ESCEEEEEESSSBEEEEEET-----TSCEEECSEEEECCTTCBT
T ss_pred ccCccccchhhhCCHHHHHHHHHHHHHhCCCCEEE-EeEEEEEEecCCEEEEEEEC-----CCcEEEeCEEEEccCCCcc
Confidence 00 1234556667777 599994 679999987777654 5543 4568999999999998765
Q ss_pred C
Q 011787 318 T 318 (477)
Q Consensus 318 ~ 318 (477)
.
T Consensus 182 ~ 182 (637)
T 2zxi_A 182 G 182 (637)
T ss_dssp C
T ss_pred C
Confidence 4
No 283
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=97.92 E-value=3.7e-05 Score=76.84 Aligned_cols=100 Identities=19% Similarity=0.313 Sum_probs=67.2
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCeEEEEecCCCCCceeeccCccCchhhhhhhHHHHHHHhhhhhCCccccccccChH
Q 011787 43 ENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSVEVDLP 122 (477)
Q Consensus 43 ~~dvvIIGgG~AGl~aA~~l~~~g~~V~lie~~~~~GG~~~~~~~~p~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 122 (477)
..+++|||||+.|+.+|..|++.|.+|+++++.+.+... . ++
T Consensus 178 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~--------~----------------------------~~-- 219 (474)
T 1zmd_A 178 PEKMVVIGAGVIGVELGSVWQRLGADVTAVEFLGHVGGV--------G----------------------------ID-- 219 (474)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSCS--------S----------------------------CC--
T ss_pred CceEEEECCCHHHHHHHHHHHHcCCEEEEEeccCccCCc--------c----------------------------cC--
Confidence 368999999999999999999999999999986443110 0 00
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhCCeEEEEeE-EEEec--CCE-EEEEec---CCceEEEEecEEEEccCCCCCC
Q 011787 123 AMMAQKDKAVSNLTRGIEGLFKKNKVTYVKGY-GKFIS--PSE-VSVDTI---EGGNTVVKGKNIIIATGSDVKS 190 (477)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~~--~~~-~~v~~~---~g~~~~i~~d~lvlAtG~~~~~ 190 (477)
..+...+.+.+++.+++++.+. +..++ .+. +.+... ++...++.+|.||+|+|.+|..
T Consensus 220 ----------~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~~v~~~~~~~~~~~~i~~D~vv~a~G~~p~~ 284 (474)
T 1zmd_A 220 ----------MEISKNFQRILQKQGFKFKLNTKVTGATKKSDGKIDVSIEAASGGKAEVITCDVLLVCIGRRPFT 284 (474)
T ss_dssp ----------HHHHHHHHHHHHHTTCEEECSEEEEEEEECTTSCEEEEEEETTSCCCEEEEESEEEECSCEEECC
T ss_pred ----------HHHHHHHHHHHHHCCCEEEeCceEEEEEEcCCceEEEEEEecCCCCceEEEcCEEEECcCCCcCC
Confidence 0011223345667799988773 44443 222 555431 2223789999999999998853
No 284
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=97.92 E-value=9e-05 Score=74.35 Aligned_cols=97 Identities=19% Similarity=0.220 Sum_probs=65.9
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCeEEEEecCCCCCceeeccCccCchhhhhhhHHHHHHHhhhhhCCccccccccChH
Q 011787 43 ENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSVEVDLP 122 (477)
Q Consensus 43 ~~dvvIIGgG~AGl~aA~~l~~~g~~V~lie~~~~~GG~~~~~~~~p~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 122 (477)
..+++|||||+.|+.+|..|++.|.+|+++++.+.+... . .
T Consensus 174 ~k~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~~------~--------d------------------------- 214 (492)
T 3ic9_A 174 PKSVAVFGPGVIGLELGQALSRLGVIVKVFGRSGSVANL------Q--------D------------------------- 214 (492)
T ss_dssp CSEEEEESSCHHHHHHHHHHHHTTCEEEEECCTTCCTTC------C--------C-------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCeEEEEEECCccccc------C--------C-------------------------
Confidence 468999999999999999999999999999986543110 0 0
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhCCeEEEEe-EEEEe--cCCEEEEEec--CCceEEEEecEEEEccCCCCC
Q 011787 123 AMMAQKDKAVSNLTRGIEGLFKKNKVTYVKG-YGKFI--SPSEVSVDTI--EGGNTVVKGKNIIIATGSDVK 189 (477)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-~~~~~--~~~~~~v~~~--~g~~~~i~~d~lvlAtG~~~~ 189 (477)
..+.+.+.+.+++. ++++.+ .+..+ +.+.+.+... +|+..++.+|.||+|+|.+|.
T Consensus 215 ----------~~~~~~l~~~l~~~-V~i~~~~~v~~i~~~~~~v~v~~~~~~G~~~~i~~D~Vi~a~G~~p~ 275 (492)
T 3ic9_A 215 ----------EEMKRYAEKTFNEE-FYFDAKARVISTIEKEDAVEVIYFDKSGQKTTESFQYVLAATGRKAN 275 (492)
T ss_dssp ----------HHHHHHHHHHHHTT-SEEETTCEEEEEEECSSSEEEEEECTTCCEEEEEESEEEECSCCEES
T ss_pred ----------HHHHHHHHHHHhhC-cEEEECCEEEEEEEcCCEEEEEEEeCCCceEEEECCEEEEeeCCccC
Confidence 00111223344445 777655 33333 3344555553 565578999999999999885
No 285
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=97.91 E-value=6.1e-05 Score=76.56 Aligned_cols=99 Identities=23% Similarity=0.334 Sum_probs=72.7
Q ss_pred CeeEEEcccHHHHHHHHHHHHcCCcEEEEEeCCCcC--------C-------------CCC----------------HHH
Q 011787 215 KKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIV--------P-------------SMD----------------GEI 257 (477)
Q Consensus 215 ~~v~IiG~G~~g~e~a~~l~~~g~~Vtli~~~~~~~--------~-------------~~~----------------~~~ 257 (477)
.+|+|||+|+.|+.+|..|++.|.+|+++++.+.+. | .+. +++
T Consensus 17 ~dVvIIGaG~aGl~aA~~L~~~G~~v~iiE~~~~~GG~w~~~~~pg~~~d~~~~~~~~~f~~~~~~~~~~~~~~~~~~~i 96 (542)
T 1w4x_A 17 VDVLVVGAGFSGLYALYRLRELGRSVHVIETAGDVGGVWYWNRYPGARCDIESIEYCYSFSEEVLQEWNWTERYASQPEI 96 (542)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTHHHHCCCTTCBCSSCTTTSSCCSCHHHHHHCCCCBSSCBHHHH
T ss_pred CCEEEECccHHHHHHHHHHHhCCCCEEEEeCCCCCCCcccccCCCceeecccccccccccChhhhhccCcccccCCHHHH
Confidence 479999999999999999999999999999876431 1 011 234
Q ss_pred HHHHHHHHHhcC--cEEEeCceEEEEEEcCC--eEEEEEeecCCCceEEEEcCEEEEeecC--CCCC
Q 011787 258 RKQFQRSLEKQK--MKFMLKTKVVGVDLSGD--GVKLTLEPAAGGEKTILEADVVLVSAGR--TPFT 318 (477)
Q Consensus 258 ~~~~~~~l~~~g--v~~~~~~~v~~i~~~~~--~~~v~~~~~~~~~~~~i~~D~vi~a~G~--~p~~ 318 (477)
.+.+....++.+ +.+.++++|.+++.+++ ...+++. +++++.+|.||+|+|. .|..
T Consensus 97 ~~yl~~~~~~~~l~~~i~~~~~V~~~~~~~~~~~w~V~~~-----~G~~~~ad~vV~AtG~~s~p~~ 158 (542)
T 1w4x_A 97 LRYINFVADKFDLRSGITFHTTVTAAAFDEATNTWTVDTN-----HGDRIRARYLIMASGQLSVPQL 158 (542)
T ss_dssp HHHHHHHHHHTTGGGGEECSCCEEEEEEETTTTEEEEEET-----TCCEEEEEEEEECCCSCCCCCC
T ss_pred HHHHHHHHHHcCCCceEEcCcEEEEEEEcCCCCeEEEEEC-----CCCEEEeCEEEECcCCCCCCCC
Confidence 445555555554 67889999999987653 4556654 4568999999999995 4544
No 286
>1d4d_A Flavocytochrome C fumarate reductase; oxidoreductase; HET: HEM FAD; 2.50A {Shewanella oneidensis} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1d4e_A* 1d4c_A*
Probab=97.91 E-value=9.7e-05 Score=75.54 Aligned_cols=103 Identities=18% Similarity=0.226 Sum_probs=75.7
Q ss_pred CCeeEEEcccHHHHHHHHHHHHcCCcEEEEEeCCCcCCC--------------------C--------------------
Q 011787 214 PKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIVPS--------------------M-------------------- 253 (477)
Q Consensus 214 ~~~v~IiG~G~~g~e~a~~l~~~g~~Vtli~~~~~~~~~--------------------~-------------------- 253 (477)
..+|+|||+|..|+.+|..+++.|.+|+++++.+.+... .
T Consensus 126 ~~~v~viG~G~aG~~aa~~~~~~g~~v~~~e~~~~~~~~~~~a~gg~~~~~~~~~~~~g~~ds~~~~~~~~~~~g~~~~~ 205 (572)
T 1d4d_A 126 TTDVVIIGSGGAGLAAAVSARDAGAKVILLEKEPIPGGNTKLAAGGMNAAETKPQAKLGIEDKKQIMIDDTMKGGRNIND 205 (572)
T ss_dssp ECSEEEECCSHHHHHHHHHHHSSSCCEEEECSSSSSCTTGGGCCSCEECCSSSTTGGGTCCCCTHHHHHHHHHHTTTCSC
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCcEEEEecCCCCCcchhhhCCeeEccCCHHHHHhCCCCCHHHHHHHHHHhcCCCCC
Confidence 457999999999999999999999999999987643210 0
Q ss_pred ------------------------------------------------CHHHHHHHHHHHHhcCcEEEeCceEEEEEEcC
Q 011787 254 ------------------------------------------------DGEIRKQFQRSLEKQKMKFMLKTKVVGVDLSG 285 (477)
Q Consensus 254 ------------------------------------------------~~~~~~~~~~~l~~~gv~~~~~~~v~~i~~~~ 285 (477)
...+...+.+.+++.||+++++++++++..++
T Consensus 206 ~~~v~~~~~~~~~~i~~l~~~Gv~~~~~~~~gg~~~~r~~~~~~~~~~g~~l~~~L~~~~~~~gv~i~~~t~v~~l~~~~ 285 (572)
T 1d4d_A 206 PELVKVLANNSSDSIDWLTSMGADMTDVGRMGGASVNRSHRPTGGAGVGAHVAQVLWDNAVKRGTDIRLNSRVVRILEDA 285 (572)
T ss_dssp HHHHHHHHHTHHHHHHHHHHHTCCCCEEECCTTCSSCCEEESTTTCCHHHHHHHHHHHHHHHTTCEEESSEEEEEEEEC-
T ss_pred HHHHHHHHHccHHHHHHHHhcCCccccccccCCCcCCeeEecCCCCCCHHHHHHHHHHHHHHcCCeEEecCEEEEEEECC
Confidence 01233455667778899999999999997665
Q ss_pred -CeEE-EEEeecCCCceEEEEcCEEEEeecCCCC
Q 011787 286 -DGVK-LTLEPAAGGEKTILEADVVLVSAGRTPF 317 (477)
Q Consensus 286 -~~~~-v~~~~~~~~~~~~i~~D~vi~a~G~~p~ 317 (477)
+++. +.+.+ .++....+.+|.||+|+|..++
T Consensus 286 ~g~v~GV~~~~-~~G~~~~i~A~~VVlAtGg~~~ 318 (572)
T 1d4d_A 286 SGKVTGVLVKG-EYTGYYVIKADAVVIAAGGFAK 318 (572)
T ss_dssp -CCEEEEEEEE-TTTEEEEEECSEEEECCCCCTT
T ss_pred CCeEEEEEEEe-CCCcEEEEEcCEEEEeCCCCcc
Confidence 5543 55442 2233357999999999997664
No 287
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=97.90 E-value=4.1e-05 Score=76.41 Aligned_cols=98 Identities=23% Similarity=0.341 Sum_probs=66.6
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCeEEEEecCCCCCceeeccCccCchhhhhhhHHHHHHHhhhhhCCccccccccChH
Q 011787 43 ENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSVEVDLP 122 (477)
Q Consensus 43 ~~dvvIIGgG~AGl~aA~~l~~~g~~V~lie~~~~~GG~~~~~~~~p~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 122 (477)
..+++|||||+.|+.+|..|++.|.+|+++++.+.+. |. ++
T Consensus 174 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l---------~~----------------------------~d-- 214 (468)
T 2qae_A 174 PKTMVVIGGGVIGLELGSVWARLGAEVTVVEFAPRCA---------PT----------------------------LD-- 214 (468)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSS---------TT----------------------------SC--
T ss_pred CceEEEECCCHHHHHHHHHHHHhCCEEEEEecCCccc---------cc----------------------------CC--
Confidence 4689999999999999999999999999999854331 10 00
Q ss_pred HHHHHHHHHHHHHHHHHHHHh-hhCCeEEEEe-EEEEecC--CEEEEEec--CCceEEEEecEEEEccCCCCC
Q 011787 123 AMMAQKDKAVSNLTRGIEGLF-KKNKVTYVKG-YGKFISP--SEVSVDTI--EGGNTVVKGKNIIIATGSDVK 189 (477)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~-~~~~~~~--~~~~v~~~--~g~~~~i~~d~lvlAtG~~~~ 189 (477)
..+...+.+.+ ++.+++++.+ .+..++. +.+.+.+. +|+..++.+|.||+|+|.+|.
T Consensus 215 ----------~~~~~~l~~~l~~~~gv~i~~~~~v~~i~~~~~~~~v~~~~~~g~~~~i~~D~vv~a~G~~p~ 277 (468)
T 2qae_A 215 ----------EDVTNALVGALAKNEKMKFMTSTKVVGGTNNGDSVSLEVEGKNGKRETVTCEALLVSVGRRPF 277 (468)
T ss_dssp ----------HHHHHHHHHHHHHHTCCEEECSCEEEEEEECSSSEEEEEECC---EEEEEESEEEECSCEEEC
T ss_pred ----------HHHHHHHHHHHhhcCCcEEEeCCEEEEEEEcCCeEEEEEEcCCCceEEEECCEEEECCCcccC
Confidence 00112234455 6779998876 4444432 23555544 554467999999999999885
No 288
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=97.88 E-value=5.2e-05 Score=76.02 Aligned_cols=97 Identities=14% Similarity=0.110 Sum_probs=69.6
Q ss_pred CCcEEEECCChHHHHHHHHHHHC---CCeEEEEecCCCCCceeeccCccCchhhhhhhHHHHHHHhhhhhCCcccccccc
Q 011787 43 ENDVVVIGGGPGGYVAAIKAAQL---GLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSVEV 119 (477)
Q Consensus 43 ~~dvvIIGgG~AGl~aA~~l~~~---g~~V~lie~~~~~GG~~~~~~~~p~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~ 119 (477)
..+++|||||+.|+.+|..|++. |.+|+++++.+.+. |. +
T Consensus 187 ~~~vvViGgG~ig~E~A~~l~~~~~~g~~Vtlv~~~~~~l---------~~----------------------------~ 229 (490)
T 1fec_A 187 PKRALCVGGGYISIEFAGIFNAYKARGGQVDLAYRGDMIL---------RG----------------------------F 229 (490)
T ss_dssp CSEEEEECSSHHHHHHHHHHHHHSCTTCEEEEEESSSSSS---------TT----------------------------S
T ss_pred CCeEEEECCCHHHHHHHHHHHhhccCcCeEEEEEcCCCcc---------cc----------------------------c
Confidence 46899999999999999999999 99999999854321 10 0
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHHhhhCCeEEEEe-EEEEecC---CEEEEEecCCceEEEEecEEEEccCCCCCC
Q 011787 120 DLPAMMAQKDKAVSNLTRGIEGLFKKNKVTYVKG-YGKFISP---SEVSVDTIEGGNTVVKGKNIIIATGSDVKS 190 (477)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-~~~~~~~---~~~~v~~~~g~~~~i~~d~lvlAtG~~~~~ 190 (477)
+ ..+...+...+++.+++++.+ .+..+.. ..+.|.+.+| .++.+|.||+|+|.+|..
T Consensus 230 d------------~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~~v~~~~G--~~i~~D~vv~a~G~~p~~ 290 (490)
T 1fec_A 230 D------------SELRKQLTEQLRANGINVRTHENPAKVTKNADGTRHVVFESG--AEADYDVVMLAIGRVPRS 290 (490)
T ss_dssp C------------HHHHHHHHHHHHHTTEEEEETCCEEEEEECTTSCEEEEETTS--CEEEESEEEECSCEEESC
T ss_pred C------------HHHHHHHHHHHHhCCCEEEeCCEEEEEEEcCCCEEEEEECCC--cEEEcCEEEEccCCCcCc
Confidence 0 001222344566789999887 3444432 2367777777 579999999999998853
No 289
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=97.88 E-value=4.3e-05 Score=77.33 Aligned_cols=96 Identities=18% Similarity=0.186 Sum_probs=68.8
Q ss_pred CcEEEECCChHHHHHHHHHHHCCCeEEEEecCCCCCceeeccCccCchhhhhhhHHHHHHHhhhhhCCccccccccChHH
Q 011787 44 NDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSVEVDLPA 123 (477)
Q Consensus 44 ~dvvIIGgG~AGl~aA~~l~~~g~~V~lie~~~~~GG~~~~~~~~p~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 123 (477)
.+++|||||..|+.+|..|++.|.+|+++++.+.+.. . ++
T Consensus 215 ~~vvViGgG~~g~E~A~~l~~~G~~Vtlv~~~~~~l~---------~----------------------------~~--- 254 (523)
T 1mo9_A 215 STVVVVGGSKTAVEYGCFFNATGRRTVMLVRTEPLKL---------I----------------------------KD--- 254 (523)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCTTTT---------C----------------------------CS---
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCeEEEEEecCcccc---------c----------------------------cc---
Confidence 7899999999999999999999999999998543210 0 00
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhCCeEEEEe-EEEEecC--CE----EEEEecCCceE-EEEecEEEEccCCCCCC
Q 011787 124 MMAQKDKAVSNLTRGIEGLFKKNKVTYVKG-YGKFISP--SE----VSVDTIEGGNT-VVKGKNIIIATGSDVKS 190 (477)
Q Consensus 124 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-~~~~~~~--~~----~~v~~~~g~~~-~i~~d~lvlAtG~~~~~ 190 (477)
..+...+...+++.+++++.+ .+..+.. +. +.|.+.+| . ++.+|.||+|+|.+|..
T Consensus 255 ---------~~~~~~l~~~l~~~GV~i~~~~~V~~i~~~~~~~v~~~~v~~~~G--~~~i~aD~Vv~A~G~~p~~ 318 (523)
T 1mo9_A 255 ---------NETRAYVLDRMKEQGMEIISGSNVTRIEEDANGRVQAVVAMTPNG--EMRIETDFVFLGLGEQPRS 318 (523)
T ss_dssp ---------HHHHHHHHHHHHHTTCEEESSCEEEEEEECTTSBEEEEEEEETTE--EEEEECSCEEECCCCEECC
T ss_pred ---------HHHHHHHHHHHHhCCcEEEECCEEEEEEEcCCCceEEEEEEECCC--cEEEEcCEEEECcCCccCC
Confidence 001222345566779998876 4444432 33 56777776 4 89999999999998864
No 290
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=97.88 E-value=5.3e-05 Score=76.10 Aligned_cols=97 Identities=15% Similarity=0.138 Sum_probs=69.3
Q ss_pred CCcEEEECCChHHHHHHHHHHHC---CCeEEEEecCCCCCceeeccCccCchhhhhhhHHHHHHHhhhhhCCcccccccc
Q 011787 43 ENDVVVIGGGPGGYVAAIKAAQL---GLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSVEV 119 (477)
Q Consensus 43 ~~dvvIIGgG~AGl~aA~~l~~~---g~~V~lie~~~~~GG~~~~~~~~p~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~ 119 (477)
..+++|||||+.|+.+|..|++. |.+|+|+++.+.+- |. +
T Consensus 191 ~~~vvViGgG~ig~E~A~~l~~~~~~g~~Vtlv~~~~~~l---------~~----------------------------~ 233 (495)
T 2wpf_A 191 PRRVLTVGGGFISVEFAGIFNAYKPPGGKVTLCYRNNLIL---------RG----------------------------F 233 (495)
T ss_dssp CSEEEEECSSHHHHHHHHHHHHHCCTTCEEEEEESSSSSC---------TT----------------------------S
T ss_pred CCeEEEECCCHHHHHHHHHHHhhCCCCCeEEEEEcCCccc---------cc----------------------------c
Confidence 36899999999999999999999 99999999854321 00 0
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHHhhhCCeEEEEe-EEEEecC---CEEEEEecCCceEEEEecEEEEccCCCCCC
Q 011787 120 DLPAMMAQKDKAVSNLTRGIEGLFKKNKVTYVKG-YGKFISP---SEVSVDTIEGGNTVVKGKNIIIATGSDVKS 190 (477)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-~~~~~~~---~~~~v~~~~g~~~~i~~d~lvlAtG~~~~~ 190 (477)
+ ..+...+.+.+++.+|+++.+ .+..+.. ....|.+.+| .++.+|.||+|+|.+|..
T Consensus 234 d------------~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~~v~~~~G--~~i~~D~vv~a~G~~p~~ 294 (495)
T 2wpf_A 234 D------------ETIREEVTKQLTANGIEIMTNENPAKVSLNTDGSKHVTFESG--KTLDVDVVMMAIGRIPRT 294 (495)
T ss_dssp C------------HHHHHHHHHHHHHTTCEEEESCCEEEEEECTTSCEEEEETTS--CEEEESEEEECSCEEECC
T ss_pred C------------HHHHHHHHHHHHhCCCEEEeCCEEEEEEEcCCceEEEEECCC--cEEEcCEEEECCCCcccc
Confidence 0 001122344566789999887 3444432 2366777777 589999999999998853
No 291
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=97.87 E-value=5.3e-05 Score=75.79 Aligned_cols=98 Identities=16% Similarity=0.145 Sum_probs=67.9
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCeEEEEecCCCCCceeeccCccCchhhhhhhHHHHHHHhhhhhCCccccccccChH
Q 011787 43 ENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSVEVDLP 122 (477)
Q Consensus 43 ~~dvvIIGgG~AGl~aA~~l~~~g~~V~lie~~~~~GG~~~~~~~~p~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 122 (477)
..+++|||||+.|+.+|..|++.|.+|+++++.+.+. |. ++
T Consensus 185 ~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l---------~~----------------------------~d-- 225 (479)
T 2hqm_A 185 PKKVVVVGAGYIGIELAGVFHGLGSETHLVIRGETVL---------RK----------------------------FD-- 225 (479)
T ss_dssp CSEEEEECSSHHHHHHHHHHHHTTCEEEEECSSSSSC---------TT----------------------------SC--
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCceEEEEeCCccc---------cc----------------------------cC--
Confidence 4689999999999999999999999999999854321 00 00
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhCCeEEEEe-EEEEecC--CE--EEEEecCCceEEEEecEEEEccCCCCCC
Q 011787 123 AMMAQKDKAVSNLTRGIEGLFKKNKVTYVKG-YGKFISP--SE--VSVDTIEGGNTVVKGKNIIIATGSDVKS 190 (477)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-~~~~~~~--~~--~~v~~~~g~~~~i~~d~lvlAtG~~~~~ 190 (477)
..+...+.+.+++.+++++.+ .+..+.. +. ..+.+.+|+ .++.+|.||+|+|.+|..
T Consensus 226 ----------~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~~~v~~~~G~-~~i~~D~vv~a~G~~p~~ 287 (479)
T 2hqm_A 226 ----------ECIQNTITDHYVKEGINVHKLSKIVKVEKNVETDKLKIHMNDSK-SIDDVDELIWTIGRKSHL 287 (479)
T ss_dssp ----------HHHHHHHHHHHHHHTCEEECSCCEEEEEECC-CCCEEEEETTSC-EEEEESEEEECSCEEECC
T ss_pred ----------HHHHHHHHHHHHhCCeEEEeCCEEEEEEEcCCCcEEEEEECCCc-EEEEcCEEEECCCCCCcc
Confidence 001112234455668888877 3444432 22 567776663 579999999999998864
No 292
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=97.85 E-value=7.5e-05 Score=72.89 Aligned_cols=96 Identities=18% Similarity=0.239 Sum_probs=68.9
Q ss_pred eeEEEcccHHHHHHHHHHHHcCCcEEEEEeCCCcCCC-------CCHHHH------------------------------
Q 011787 216 KLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIVPS-------MDGEIR------------------------------ 258 (477)
Q Consensus 216 ~v~IiG~G~~g~e~a~~l~~~g~~Vtli~~~~~~~~~-------~~~~~~------------------------------ 258 (477)
+|+|||+|+.|+-+|..|++.|.+|+++++.+.+... +.+...
T Consensus 3 ~V~IVGaGpaGl~~A~~L~~~G~~v~v~Er~~~~~~~~~G~~i~l~~~~~~~L~~lg~~~~~~~~~~~~~~~~~~~~~~~ 82 (412)
T 4hb9_A 3 HVGIIGAGIGGTCLAHGLRKHGIKVTIYERNSAASSILPGYGIHINSFGKQALQECLPAENWLAFEEASRYIGGQSRFYN 82 (412)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSSCSSCSSCCCCEEEECHHHHHHHHHHSCHHHHHHHHHHCEEECCCCEEEC
T ss_pred EEEEECcCHHHHHHHHHHHhCCCCEEEEecCCCCCcCCCceEEeeCHHHHHHHHHcCChHHHHHhhhhhcccCcceeEec
Confidence 6999999999999999999999999999987654211 111110
Q ss_pred -----------------------------HHHHHHHHh-cCcEEEeCceEEEEEEcC-CeEEEEEeecCCCceEEEEcCE
Q 011787 259 -----------------------------KQFQRSLEK-QKMKFMLKTKVVGVDLSG-DGVKLTLEPAAGGEKTILEADV 307 (477)
Q Consensus 259 -----------------------------~~~~~~l~~-~gv~~~~~~~v~~i~~~~-~~~~v~~~~~~~~~~~~i~~D~ 307 (477)
..+.+.|.+ .+..+.+++++++++..+ +++.+++. +++++++|+
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~R~~L~~~L~~~~~~~v~~~~~v~~~~~~~~~~v~v~~~-----dG~~~~adl 157 (412)
T 4hb9_A 83 ERMRLLAVHGGISPMAGKIISEQRLSISRTELKEILNKGLANTIQWNKTFVRYEHIENGGIKIFFA-----DGSHENVDV 157 (412)
T ss_dssp TTSCEEEC--------------CEEEEEHHHHHHHHHTTCTTTEECSCCEEEEEECTTSCEEEEET-----TSCEEEESE
T ss_pred CCcceecccCCccccccccccccceEeeHHHHHHHHHhhccceEEEEEEEEeeeEcCCCeEEEEEC-----CCCEEEeeE
Confidence 112232322 244577889999997654 46777775 667899999
Q ss_pred EEEeecCCC
Q 011787 308 VLVSAGRTP 316 (477)
Q Consensus 308 vi~a~G~~p 316 (477)
||-|-|...
T Consensus 158 vVgADG~~S 166 (412)
T 4hb9_A 158 LVGADGSNS 166 (412)
T ss_dssp EEECCCTTC
T ss_pred EEECCCCCc
Confidence 999999764
No 293
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=97.85 E-value=1.1e-05 Score=80.09 Aligned_cols=89 Identities=22% Similarity=0.253 Sum_probs=69.6
Q ss_pred CCCeeEEEcccHHHHHHHHHHHHcCCcEEEEEeCCCc-------CCC--CCHHHHHHHHHHHHhcCcEEEeCceEEEEEE
Q 011787 213 VPKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADI-------VPS--MDGEIRKQFQRSLEKQKMKFMLKTKVVGVDL 283 (477)
Q Consensus 213 ~~~~v~IiG~G~~g~e~a~~l~~~g~~Vtli~~~~~~-------~~~--~~~~~~~~~~~~l~~~gv~~~~~~~v~~i~~ 283 (477)
..++|+|||+|+.|+.+|..|++.|.+|+++++.+.+ .|. ++.++.....+.+++.|+++++++.+.
T Consensus 121 ~~~~V~IIGgGpAGl~aA~~L~~~G~~V~v~e~~~~~GG~l~~gip~~~~~~~~~~~~~~~l~~~gv~~~~~~~v~---- 196 (456)
T 2vdc_G 121 LGLSVGVIGAGPAGLAAAEELRAKGYEVHVYDRYDRMGGLLVYGIPGFKLEKSVVERRVKLLADAGVIYHPNFEVG---- 196 (456)
T ss_dssp CCCCEEEECCSHHHHHHHHHHHHHTCCEEEECSSSSCSTHHHHTSCTTTSCHHHHHHHHHHHHHTTCEEETTCCBT----
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCeEEEEeccCCCCCeeeecCCCccCCHHHHHHHHHHHHHCCcEEEeCCEec----
Confidence 3578999999999999999999999999999998765 232 466777778888999999999987652
Q ss_pred cCCeEEEEEeecCCCceEEEEcCEEEEeecCC
Q 011787 284 SGDGVKLTLEPAAGGEKTILEADVVLVSAGRT 315 (477)
Q Consensus 284 ~~~~~~v~~~~~~~~~~~~i~~D~vi~a~G~~ 315 (477)
.. +++. + ..+.+|.|++|+|..
T Consensus 197 --~~--v~~~-----~-~~~~~d~vvlAtG~~ 218 (456)
T 2vdc_G 197 --RD--ASLP-----E-LRRKHVAVLVATGVY 218 (456)
T ss_dssp --TT--BCHH-----H-HHSSCSEEEECCCCC
T ss_pred --cE--EEhh-----H-hHhhCCEEEEecCCC
Confidence 11 1111 1 235699999999986
No 294
>1b37_A Protein (polyamine oxidase); flavin-dependent amine oxidase, oxidoreductase; HET: NAG FCA MAN FAD; 1.90A {Zea mays} SCOP: c.3.1.2 d.16.1.5 PDB: 1b5q_A* 1h81_A* 1h82_A* 1h83_A* 1h84_A* 1h86_A* 3kpf_A* 3ku9_A* 3l1r_A*
Probab=97.84 E-value=1e-05 Score=80.87 Aligned_cols=43 Identities=26% Similarity=0.432 Sum_probs=38.1
Q ss_pred CCCcEEEECCChHHHHHHHHHHHCCC-eEEEEecCCCCCceeec
Q 011787 42 DENDVVVIGGGPGGYVAAIKAAQLGL-KTTCIEKRGALGGTCLN 84 (477)
Q Consensus 42 ~~~dvvIIGgG~AGl~aA~~l~~~g~-~V~lie~~~~~GG~~~~ 84 (477)
..+||+|||||++|+++|..|++.|. +|+|+|+++.+||.|..
T Consensus 3 ~~~~~~iiG~G~~g~~~a~~l~~~g~~~v~~~e~~~~~gg~~~~ 46 (472)
T 1b37_A 3 VGPRVIVVGAGMSGISAAKRLSEAGITDLLILEATDHIGGRMHK 46 (472)
T ss_dssp --CCEEEECCBHHHHHHHHHHHHTTCCCEEEECSSSSSBTTSCE
T ss_pred CCCeEEEECCCHHHHHHHHHHHhcCCCceEEEeCCCCCCCceee
Confidence 35799999999999999999999998 89999999999987643
No 295
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=97.84 E-value=6.5e-05 Score=74.85 Aligned_cols=98 Identities=18% Similarity=0.186 Sum_probs=70.2
Q ss_pred CeeEEEcccHHHHHHHHHHHHcCCcEEEEEeCCCcCC-------------------------------CCCHH-------
Q 011787 215 KKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIVP-------------------------------SMDGE------- 256 (477)
Q Consensus 215 ~~v~IiG~G~~g~e~a~~l~~~g~~Vtli~~~~~~~~-------------------------------~~~~~------- 256 (477)
.+++|||+|+.|+.+|..+++.|.+|+++++.+.+.. .++..
T Consensus 5 ~DVvVIGgG~aGl~aA~~l~~~G~~V~liEk~~~~GG~~~~~gciPsk~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (466)
T 3l8k_A 5 YDVVVIGAGGAGYHGAFRLAKAKYNVLMADPKGELGGNCLYSGCVPSKTVREVIQTAWRLTNIANVKIPLDFSTVQDRKD 84 (466)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECTTSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHHHCSCCCCCHHHHHHHHH
T ss_pred ceEEEECCCHHHHHHHHHHHhCCCeEEEEECCCCCCCcccccCCCchHHHHHHHHHHHHHHhcccCCCCcCHHHHHHHHH
Confidence 3699999999999999999999999999997665411 11110
Q ss_pred ----HH--HHHHHHHHhcCcEEEeCceEEEEEEcCCeEEEEEeecCCCceEE--EEcCEEEEeecCCCCCCC
Q 011787 257 ----IR--KQFQRSLEKQKMKFMLKTKVVGVDLSGDGVKLTLEPAAGGEKTI--LEADVVLVSAGRTPFTAG 320 (477)
Q Consensus 257 ----~~--~~~~~~l~~~gv~~~~~~~v~~i~~~~~~~~v~~~~~~~~~~~~--i~~D~vi~a~G~~p~~~~ 320 (477)
+. ..+.+.+++.|++++.+ ++..++ .+.+.+... +++. +.+|.+|+|+|.+|....
T Consensus 85 ~~~~l~~~~~~~~~~~~~~v~~~~g-~v~~id--~~~~~V~~~-----~g~~~~~~~d~lviAtG~~p~~p~ 148 (466)
T 3l8k_A 85 YVQELRFKQHKRNMSQYETLTFYKG-YVKIKD--PTHVIVKTD-----EGKEIEAETRYMIIASGAETAKLR 148 (466)
T ss_dssp HHHHHHHHHHHHHHTTCTTEEEESE-EEEEEE--TTEEEEEET-----TSCEEEEEEEEEEECCCEEECCCC
T ss_pred hheeccccchHHHHHHhCCCEEEEe-EEEEec--CCeEEEEcC-----CCcEEEEecCEEEECCCCCccCCC
Confidence 01 33445566779999876 566664 455555543 3445 999999999999887653
No 296
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=97.82 E-value=0.0001 Score=73.93 Aligned_cols=97 Identities=16% Similarity=0.219 Sum_probs=66.1
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCeEEEEecCCCCCceeeccCccCchhhhhhhHHHHHHHhhhhhCCccccccccChH
Q 011787 43 ENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSVEVDLP 122 (477)
Q Consensus 43 ~~dvvIIGgG~AGl~aA~~l~~~g~~V~lie~~~~~GG~~~~~~~~p~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 122 (477)
..+++|||||+.|+.+|..|++.|.+|+++++...+ |. ++
T Consensus 185 ~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~l----------~~----------------------------~d-- 224 (488)
T 3dgz_A 185 PGKTLVVGASYVALECAGFLTGIGLDTTVMMRSIPL----------RG----------------------------FD-- 224 (488)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEESSCSS----------TT----------------------------SC--
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCceEEEEcCccc----------cc----------------------------CC--
Confidence 357999999999999999999999999999984211 00 00
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhCCeEEEEeE-EEEe---cCCEEEEEecC---CceEEEEecEEEEccCCCCC
Q 011787 123 AMMAQKDKAVSNLTRGIEGLFKKNKVTYVKGY-GKFI---SPSEVSVDTIE---GGNTVVKGKNIIIATGSDVK 189 (477)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~---~~~~~~v~~~~---g~~~~i~~d~lvlAtG~~~~ 189 (477)
..+.+.+...+++.+|+++.+. +..+ +.....+...+ |+..++.+|.||+|+|.+|.
T Consensus 225 ----------~~~~~~l~~~l~~~gv~~~~~~~v~~i~~~~~~~~~v~~~~~~~g~~~~~~~D~vi~a~G~~p~ 288 (488)
T 3dgz_A 225 ----------QQMSSLVTEHMESHGTQFLKGCVPSHIKKLPTNQLQVTWEDHASGKEDTGTFDTVLWAIGRVPE 288 (488)
T ss_dssp ----------HHHHHHHHHHHHHTTCEEEETEEEEEEEECTTSCEEEEEEETTTTEEEEEEESEEEECSCEEES
T ss_pred ----------HHHHHHHHHHHHHCCCEEEeCCEEEEEEEcCCCcEEEEEEeCCCCeeEEEECCEEEEcccCCcc
Confidence 0012223455677899998873 3333 33445554433 53346899999999998875
No 297
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=97.82 E-value=0.00016 Score=72.41 Aligned_cols=102 Identities=19% Similarity=0.244 Sum_probs=69.7
Q ss_pred CeeEEEcccHHHHHHHHHHHHcCCcEEEEEeCCCcC--------------------------------C----CCCHH--
Q 011787 215 KKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIV--------------------------------P----SMDGE-- 256 (477)
Q Consensus 215 ~~v~IiG~G~~g~e~a~~l~~~g~~Vtli~~~~~~~--------------------------------~----~~~~~-- 256 (477)
.+++|||+|+.|+.+|..+++.|.+|+++++.+.+. + .++..
T Consensus 7 ~dVvIIGaG~aGl~aA~~l~~~G~~V~liE~~~~~GG~~~~~g~~psk~ll~~~~~~~~~~~~~~~gi~~~~~~~~~~~~ 86 (482)
T 1ojt_A 7 YDVVVLGGGPGGYSAAFAAADEGLKVAIVERYKTLGGVCLNVGCIPSKALLHNAAVIDEVRHLAANGIKYPEPELDIDML 86 (482)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSCSSHHHHHHSHHHHHHHHHHHHHHHHHHHGGGGTCCCCCCCCCHHHH
T ss_pred CCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCCCCceeeecccchHHHHHHHHHHHHHHHHHhCCcccCCCccCHHHH
Confidence 469999999999999999999999999999865431 0 01111
Q ss_pred ----------HHHHHHHHHHhcCcEEEeCceEEEEEEcCCeEEEEEeec-------CCCceEEEEcCEEEEeecCCCCCC
Q 011787 257 ----------IRKQFQRSLEKQKMKFMLKTKVVGVDLSGDGVKLTLEPA-------AGGEKTILEADVVLVSAGRTPFTA 319 (477)
Q Consensus 257 ----------~~~~~~~~l~~~gv~~~~~~~v~~i~~~~~~~~v~~~~~-------~~~~~~~i~~D~vi~a~G~~p~~~ 319 (477)
+...+.+.+++.|++++.++.+. + +++.+.+...+. .+++..++.+|.+|+|+|.+|...
T Consensus 87 ~~~~~~~~~~l~~~~~~~~~~~gv~~~~g~~~~-~--~~~~v~v~~~~g~~~~~~~~~g~~~~i~ad~lViAtGs~p~~~ 163 (482)
T 1ojt_A 87 RAYKDGVVSRLTGGLAGMAKSRKVDVIQGDGQF-L--DPHHLEVSLTAGDAYEQAAPTGEKKIVAFKNCIIAAGSRVTKL 163 (482)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTCEEEEEEEEE-E--ETTEEEEEEEEEEETTEEEEEEEEEEEEEEEEEECCCEEECCC
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCcEEEeeEEEE-c--cCCEEEEEecCCcccccccccCcceEEEcCEEEECCCCCCCCC
Confidence 11123455677899999887654 2 445566654311 011126799999999999998764
No 298
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=97.81 E-value=9.4e-05 Score=74.24 Aligned_cols=99 Identities=23% Similarity=0.336 Sum_probs=68.3
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCeEEEEecCCCCCceeeccCccCchhhhhhhHHHHHHHhhhhhCCccccccccChH
Q 011787 43 ENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSVEVDLP 122 (477)
Q Consensus 43 ~~dvvIIGgG~AGl~aA~~l~~~g~~V~lie~~~~~GG~~~~~~~~p~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 122 (477)
..+++|||||+.|+.+|..|++.|.+|+++++.+.+... . +
T Consensus 198 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~------~-------------------------------d-- 238 (491)
T 3urh_A 198 PASMIVVGGGVIGLELGSVWARLGAKVTVVEFLDTILGG------M-------------------------------D-- 238 (491)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSSSSS------S-------------------------------C--
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCEEEEEecccccccc------C-------------------------------C--
Confidence 468999999999999999999999999999985543110 0 0
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhCCeEEEEeE-EEEe--cCCEEEEEecC---CceEEEEecEEEEccCCCCCC
Q 011787 123 AMMAQKDKAVSNLTRGIEGLFKKNKVTYVKGY-GKFI--SPSEVSVDTIE---GGNTVVKGKNIIIATGSDVKS 190 (477)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~--~~~~~~v~~~~---g~~~~i~~d~lvlAtG~~~~~ 190 (477)
..+...+.+.+++.+++++.+. +..+ +.+...+...+ |+..++.+|.||+|+|.+|..
T Consensus 239 ----------~~~~~~l~~~l~~~gV~v~~~~~v~~i~~~~~~~~v~~~~~~~g~~~~i~~D~Vi~a~G~~p~~ 302 (491)
T 3urh_A 239 ----------GEVAKQLQRMLTKQGIDFKLGAKVTGAVKSGDGAKVTFEPVKGGEATTLDAEVVLIATGRKPST 302 (491)
T ss_dssp ----------HHHHHHHHHHHHHTTCEEECSEEEEEEEEETTEEEEEEEETTSCCCEEEEESEEEECCCCEECC
T ss_pred ----------HHHHHHHHHHHHhCCCEEEECCeEEEEEEeCCEEEEEEEecCCCceEEEEcCEEEEeeCCccCC
Confidence 0012223445667789988763 3333 23455555442 544789999999999998853
No 299
>2z3y_A Lysine-specific histone demethylase 1; chromatin, nucleosome, transcription, LSD1, alternative splicing, chromatin regulator, coiled coil; HET: F2N; 2.25A {Homo sapiens} SCOP: a.4.1.18 c.3.1.2 d.16.1.5 PDB: 2ejr_A* 2z5u_A* 3abt_A* 3abu_A* 2y48_A* 2v1d_A* 2h94_A* 2iw5_A* 2uxn_A* 2uxx_A* 2hko_A* 2dw4_A* 2x0l_A* 2l3d_A
Probab=97.79 E-value=1.8e-05 Score=82.49 Aligned_cols=43 Identities=30% Similarity=0.569 Sum_probs=39.3
Q ss_pred CCCCcEEEECCChHHHHHHHHHHHCCCeEEEEecCCCCCceee
Q 011787 41 SDENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGALGGTCL 83 (477)
Q Consensus 41 ~~~~dvvIIGgG~AGl~aA~~l~~~g~~V~lie~~~~~GG~~~ 83 (477)
...+||+|||||++|++||..|++.|++|+|+|+.+.+||.+.
T Consensus 105 ~~~~~v~viG~G~~gl~~a~~l~~~g~~v~~~e~~~~~gg~~~ 147 (662)
T 2z3y_A 105 KKTGKVIIIGSGVSGLAAARQLQSFGMDVTLLEARDRVGGRVA 147 (662)
T ss_dssp SCCCEEEEECCBHHHHHHHHHHHHTTCEEEEECSSSSSBTTCC
T ss_pred cCCCeEEEECcCHHHHHHHHHHHHCCCeEEEEecCCCCCCccc
Confidence 4568999999999999999999999999999999999998653
No 300
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=97.79 E-value=5.7e-05 Score=75.97 Aligned_cols=97 Identities=19% Similarity=0.272 Sum_probs=68.3
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCeEEEEecCCCCCceeeccCccCchhhhhhhHHHHHHHhhhhhCCccccccccChH
Q 011787 43 ENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSVEVDLP 122 (477)
Q Consensus 43 ~~dvvIIGgG~AGl~aA~~l~~~g~~V~lie~~~~~GG~~~~~~~~p~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 122 (477)
..+++|||||+.|+.+|..|++.|.+|+++++.+.+... .+
T Consensus 182 ~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~~------~d--------------------------------- 222 (499)
T 1xdi_A 182 PDHLIVVGSGVTGAEFVDAYTELGVPVTVVASQDHVLPY------ED--------------------------------- 222 (499)
T ss_dssp CSSEEEESCSHHHHHHHHHHHHTTCCEEEECSSSSSSCC------SS---------------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCeEEEEEcCCccccc------cC---------------------------------
Confidence 468999999999999999999999999999985433110 00
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhCCeEEEEe-EEEEec--CCEEEEEecCCceEEEEecEEEEccCCCCCC
Q 011787 123 AMMAQKDKAVSNLTRGIEGLFKKNKVTYVKG-YGKFIS--PSEVSVDTIEGGNTVVKGKNIIIATGSDVKS 190 (477)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-~~~~~~--~~~~~v~~~~g~~~~i~~d~lvlAtG~~~~~ 190 (477)
..+...+.+.+++.+++++.+ .+..+. .+.+.+.+.+| .++.+|.||+|+|.+|..
T Consensus 223 ----------~~~~~~l~~~l~~~GV~i~~~~~V~~i~~~~~~v~v~~~~g--~~i~aD~Vv~a~G~~p~~ 281 (499)
T 1xdi_A 223 ----------ADAALVLEESFAERGVRLFKNARAASVTRTGAGVLVTMTDG--RTVEGSHALMTIGSVPNT 281 (499)
T ss_dssp ----------HHHHHHHHHHHHHTTCEEETTCCEEEEEECSSSEEEEETTS--CEEEESEEEECCCEEECC
T ss_pred ----------HHHHHHHHHHHHHCCCEEEeCCEEEEEEEeCCEEEEEECCC--cEEEcCEEEECCCCCcCC
Confidence 001122334566778888876 344443 23366666666 679999999999998853
No 301
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=97.79 E-value=0.00014 Score=72.49 Aligned_cols=101 Identities=19% Similarity=0.297 Sum_probs=68.6
Q ss_pred CCeeEEEcccHHHHHHHHHHHHcCCcEEEEEeCCC--------------------------cCCC----------CC-HH
Q 011787 214 PKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAAD--------------------------IVPS----------MD-GE 256 (477)
Q Consensus 214 ~~~v~IiG~G~~g~e~a~~l~~~g~~Vtli~~~~~--------------------------~~~~----------~~-~~ 256 (477)
..+++|||+|+.|+.+|..+++.|.+|+++++... ..+. .+ ..
T Consensus 4 ~~dvvIIGgG~aGl~aA~~l~~~g~~V~lie~~~~GG~~~~~g~ip~k~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 83 (467)
T 1zk7_A 4 PVQVAVIGSGGAAMAAALKAVEQGAQVTLIERGTIGGTCVNVGCVPSKIMIRAAHIAHLRRESPFDGGIAATVPTIDRSK 83 (467)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSTTHHHHHHSHHHHHHHHHHHHHHHHHHCCTTTTTSCCCCCCCCHHH
T ss_pred cCCEEEECCCHHHHHHHHHHHHCCCEEEEEeCCCCCccccCCCccchHHHHHHHHHHHHHhhhhhcCCccCCCCccCHHH
Confidence 35799999999999999999999999999998731 0111 11 11
Q ss_pred HHH-------H-----HHHHHHhc-CcEEEeCceEEEEEEcCCeEEEEEeecCCCceEEEEcCEEEEeecCCCCCCC
Q 011787 257 IRK-------Q-----FQRSLEKQ-KMKFMLKTKVVGVDLSGDGVKLTLEPAAGGEKTILEADVVLVSAGRTPFTAG 320 (477)
Q Consensus 257 ~~~-------~-----~~~~l~~~-gv~~~~~~~v~~i~~~~~~~~v~~~~~~~~~~~~i~~D~vi~a~G~~p~~~~ 320 (477)
+.. . ..+.+++. |++++.+. +..+ +.+.+.+.+. +++...+.+|.+|+|+|.+|+...
T Consensus 84 ~~~~~~~~~~~l~~~~~~~~~~~~~~v~~~~g~-~~~~--~~~~~~v~~~---~g~~~~~~~d~lviAtGs~p~~p~ 154 (467)
T 1zk7_A 84 LLAQQQARVDELRHAKYEGILGGNPAITVVHGE-ARFK--DDQSLTVRLN---EGGERVVMFDRCLVATGASPAVPP 154 (467)
T ss_dssp HHHHHHHHHHHHHHHHTHHHHTTCTTEEEEEEE-EEEE--ETTEEEEEET---TSSEEEEECSEEEECCCEEECCCC
T ss_pred HHHHHHHHHHHHhhhhHHHHHhccCCeEEEEEE-EEEc--cCCEEEEEeC---CCceEEEEeCEEEEeCCCCCCCCC
Confidence 111 1 12345556 99998764 5555 3455555543 122268999999999999887653
No 302
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.78 E-value=8.6e-05 Score=74.09 Aligned_cols=99 Identities=19% Similarity=0.295 Sum_probs=69.7
Q ss_pred CeeEEEcccHHHHHHHHHHHHcCCcEEEEEeCCCcCCC-------------------------------------CCH-H
Q 011787 215 KKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIVPS-------------------------------------MDG-E 256 (477)
Q Consensus 215 ~~v~IiG~G~~g~e~a~~l~~~g~~Vtli~~~~~~~~~-------------------------------------~~~-~ 256 (477)
.+++|||+|+.|+.+|..+++.|.+|+++++.+.+... ++. .
T Consensus 7 ~dvvIIGaG~aGl~aA~~l~~~g~~V~liE~~~~~GG~~~~~g~~p~k~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 86 (470)
T 1dxl_A 7 NDVVIIGGGPGGYVAAIKAAQLGFKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAKHSFANHGVKVSNVEIDLAA 86 (470)
T ss_dssp CCEEEECCSHHHHHHHHHHHHHTCCEEEEECSSSSCCSHHHHSHHHHHHHHHHHHHHHHHHHTHHHHTEEESCEEECHHH
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCccccccCcCccchHHHHHHHHHHHHHHHHHHhcCcccCCCccCHHH
Confidence 57999999999999999999999999999998643110 010 0
Q ss_pred -----------HHHHHHHHHHhcCcEEEeCceEEEEEEcCCeEEEEEeecCCCceEEEEcCEEEEeecCCCCCC
Q 011787 257 -----------IRKQFQRSLEKQKMKFMLKTKVVGVDLSGDGVKLTLEPAAGGEKTILEADVVLVSAGRTPFTA 319 (477)
Q Consensus 257 -----------~~~~~~~~l~~~gv~~~~~~~v~~i~~~~~~~~v~~~~~~~~~~~~i~~D~vi~a~G~~p~~~ 319 (477)
+...+.+.+++.|++++.++.+. + +++.+.+... ++...++.+|.+|+|+|.+|...
T Consensus 87 ~~~~~~~~~~~l~~~~~~~~~~~gv~~~~g~~~~-~--~~~~~~v~~~---~G~~~~i~~d~lIiAtGs~p~~p 154 (470)
T 1dxl_A 87 MMGQKDKAVSNLTRGIEGLFKKNKVTYVKGYGKF-V--SPSEISVDTI---EGENTVVKGKHIIIATGSDVKSL 154 (470)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTCEEEESCEEE-E--ETTEEEECCS---SSCCEEEECSEEEECCCEEECCB
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEE-e--cCCEEEEEeC---CCceEEEEcCEEEECCCCCCCCC
Confidence 11123455667799999988654 3 3455555432 12226899999999999988754
No 303
>2r0c_A REBC; flavin adenine dinucleotide, monooxygenase, oxidoreductase; HET: FAD; 1.80A {Lechevalieria aerocolonigenes} PDB: 2r0g_A* 2r0p_A* 3ept_A*
Probab=97.78 E-value=0.00029 Score=71.69 Aligned_cols=99 Identities=13% Similarity=0.261 Sum_probs=73.8
Q ss_pred CeeEEEcccHHHHHHHHHHHHcCCcEEEEEeCCCcCC------------------------------C------------
Q 011787 215 KKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIVP------------------------------S------------ 252 (477)
Q Consensus 215 ~~v~IiG~G~~g~e~a~~l~~~g~~Vtli~~~~~~~~------------------------------~------------ 252 (477)
.+|+|||+|+.|+-+|..|++.|.+|+++++.+.+.. .
T Consensus 27 ~dVlIVGaGpaGl~~A~~La~~G~~V~vlEr~~~~~~~~~~~~l~~~~~~~l~~lGl~~~~~~~~~~~~~~~~~~~~~~~ 106 (549)
T 2r0c_A 27 TDVLILGGGPVGMALALDLAHRQVGHLVVEQTDGTITHPRVGTIGPRSMELFRRWGVAKQIRTAGWPGDHPLDAAWVTRV 106 (549)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCSCCSSCCCCEECHHHHHHHHHTTCHHHHHTSSCCTTSBCCEEEESSB
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCCCCCCceeeeCHHHHHHHHHcCChHHHHhhcCCcccccceEEeccC
Confidence 4699999999999999999999999999997653210 0
Q ss_pred -------C-------------C---------HHHHHHHHHHHHhcCcEEEeCceEEEEEEcCCeEEEEEeecCCCceEEE
Q 011787 253 -------M-------------D---------GEIRKQFQRSLEKQKMKFMLKTKVVGVDLSGDGVKLTLEPAAGGEKTIL 303 (477)
Q Consensus 253 -------~-------------~---------~~~~~~~~~~l~~~gv~~~~~~~v~~i~~~~~~~~v~~~~~~~~~~~~i 303 (477)
+ . ..+.+.+.+.+++. +++++++++++.+++++.+++.+..++...++
T Consensus 107 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~a~~~---v~~~~~v~~~~~~~~~v~v~~~~~~~G~~~~i 183 (549)
T 2r0c_A 107 GGHEVYRIPLGTADTRATPEHTPEPDAICPQHWLAPLLAEAVGER---LRTRSRLDSFEQRDDHVRATITDLRTGATRAV 183 (549)
T ss_dssp TSCEEEEECCCBTTTSCCCSSCSSCCEECCHHHHHHHHHHHHGGG---EECSEEEEEEEECSSCEEEEEEETTTCCEEEE
T ss_pred CCceeEeecccccccccccCCCCCcccccCHHHHHHHHHHHHHHh---cccCcEEEEEEEeCCEEEEEEEECCCCCEEEE
Confidence 0 0 12334455555554 88899999999888888888765333444689
Q ss_pred EcCEEEEeecCCC
Q 011787 304 EADVVLVSAGRTP 316 (477)
Q Consensus 304 ~~D~vi~a~G~~p 316 (477)
.+|+||.|.|...
T Consensus 184 ~a~~vVgADG~~S 196 (549)
T 2r0c_A 184 HARYLVACDGASS 196 (549)
T ss_dssp EEEEEEECCCTTC
T ss_pred EeCEEEECCCCCc
Confidence 9999999999653
No 304
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=97.76 E-value=3e-05 Score=77.84 Aligned_cols=103 Identities=17% Similarity=0.214 Sum_probs=73.9
Q ss_pred CCeeEEEcccHHHHHHHHHHHHcCCcEEEEEeCCCcCC----------CCC---HHHHHHHHHHHHhcCcEEEeCceEEE
Q 011787 214 PKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIVP----------SMD---GEIRKQFQRSLEKQKMKFMLKTKVVG 280 (477)
Q Consensus 214 ~~~v~IiG~G~~g~e~a~~l~~~g~~Vtli~~~~~~~~----------~~~---~~~~~~~~~~l~~~gv~~~~~~~v~~ 280 (477)
..+|+|||+|+.|+.+|..|++. .+|+++++.+.+.. .++ .++...+.+.+ +.|+++++++.+.+
T Consensus 108 ~~dVvIIGgG~aGl~aA~~L~~~-~~V~vie~~~~~GG~~~~~~~~~~g~~~~~~~~~~~l~~~l-~~~v~~~~~~~v~~ 185 (493)
T 1y56_A 108 VVDVAIIGGGPAGIGAALELQQY-LTVALIEERGWLGGDMWLKGIKQEGFNKDSRKVVEELVGKL-NENTKIYLETSALG 185 (493)
T ss_dssp EESCCEECCSHHHHHHHHHHTTT-CCEEEECTTSSSSCSGGGTCSEETTTTEEHHHHHHHHHHTC-CTTEEEETTEEECC
T ss_pred cCCEEEECccHHHHHHHHHHHhc-CCEEEEeCCCCCCCeeeccccccCCCCCCHHHHHHHHHHHH-hcCCEEEcCCEEEE
Confidence 35799999999999999999999 99999998876511 111 12233333334 56999999999999
Q ss_pred EEEcCCeEEEEEeecCCCceEEEEcCEEEEeecCCCCCCC
Q 011787 281 VDLSGDGVKLTLEPAAGGEKTILEADVVLVSAGRTPFTAG 320 (477)
Q Consensus 281 i~~~~~~~~v~~~~~~~~~~~~i~~D~vi~a~G~~p~~~~ 320 (477)
+..+++.+.+...+ .++...+.+|.+|+|+|..|....
T Consensus 186 i~~~~~~~~~~~~~--~~~~~~~~~d~lvlAtGa~~~~~~ 223 (493)
T 1y56_A 186 VFDKGEYFLVPVVR--GDKLIEILAKRVVLATGAIDSTML 223 (493)
T ss_dssp CEECSSSEEEEEEE--TTEEEEEEESCEEECCCEEECCCC
T ss_pred EEcCCcEEEEEEec--CCeEEEEECCEEEECCCCCccCCC
Confidence 88776655443321 122247999999999998887543
No 305
>3c4a_A Probable tryptophan hydroxylase VIOD; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.30A {Chromobacterium violaceum atcc 12472}
Probab=97.75 E-value=2.2e-05 Score=76.11 Aligned_cols=35 Identities=31% Similarity=0.416 Sum_probs=32.6
Q ss_pred CcEEEECCChHHHHHHHHHHHC--CCeEEEEecCCCC
Q 011787 44 NDVVVIGGGPGGYVAAIKAAQL--GLKTTCIEKRGAL 78 (477)
Q Consensus 44 ~dvvIIGgG~AGl~aA~~l~~~--g~~V~lie~~~~~ 78 (477)
+||+|||||++|+++|..|++. |.+|+|+|+.+.+
T Consensus 1 ~dV~IVGaG~aGl~~A~~L~~~~~G~~V~v~E~~~~~ 37 (381)
T 3c4a_A 1 MKILVIGAGPAGLVFASQLKQARPLWAIDIVEKNDEQ 37 (381)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSCTT
T ss_pred CeEEEECCCHHHHHHHHHHHhcCCCCCEEEEECCCCC
Confidence 4899999999999999999998 9999999997765
No 306
>2gmh_A Electron transfer flavoprotein-ubiquinone oxidoreductase; HET: BHG FAD UQ5; 2.50A {Sus scrofa} SCOP: c.3.1.2 d.16.1.8 d.58.1.6 PDB: 2gmj_A*
Probab=97.75 E-value=0.00022 Score=73.06 Aligned_cols=103 Identities=22% Similarity=0.279 Sum_probs=76.2
Q ss_pred CeeEEEcccHHHHHHHHHHHHc------CCcEEEEEeCCCcCCC------------------------------------
Q 011787 215 KKLVVIGAGYIGLEMGSVWARL------GSEVTVVEFAADIVPS------------------------------------ 252 (477)
Q Consensus 215 ~~v~IiG~G~~g~e~a~~l~~~------g~~Vtli~~~~~~~~~------------------------------------ 252 (477)
-+|+|||||+.|+.+|..|++. |.+|+++++.+.+...
T Consensus 36 ~DVvIVGaG~aGlaaA~~La~~~~~~~~G~~V~vlEk~~~~g~~~~~g~~l~~~~l~~ll~~~~~~g~~~~~~~~~~~~~ 115 (584)
T 2gmh_A 36 ADVVIVGAGPAGLSAATRLKQLAAQHEKDLRVCLVEKAAHIGAHTLSGACLDPRAFEELFPDWKEKGAPLNTPVTEDRFG 115 (584)
T ss_dssp CSEEEECCSHHHHHHHHHHHHHHHHTTCCCCEEEECSSSSTTTTCCCCCEECTHHHHHHCTTHHHHTCCCCEECCEEEEE
T ss_pred CCEEEECcCHHHHHHHHHHHhcccccCCCCcEEEEeCCCCCCCccccccccCHHHHHHHHHHHHhcCCceeeeechhhee
Confidence 4799999999999999999998 9999999986543100
Q ss_pred ---------C---C--------------HHHHHHHHHHHHhcCcEEEeCceEEEEEEcCC-eEE-EEEee---cCCCc--
Q 011787 253 ---------M---D--------------GEIRKQFQRSLEKQKMKFMLKTKVVGVDLSGD-GVK-LTLEP---AAGGE-- 299 (477)
Q Consensus 253 ---------~---~--------------~~~~~~~~~~l~~~gv~~~~~~~v~~i~~~~~-~~~-v~~~~---~~~~~-- 299 (477)
+ + ..+.+.+.+.+++.|++++++++++++..+++ .+. +.+.+ ..++.
T Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~a~~~Gv~i~~g~~v~~l~~~~~g~V~gV~~~~~g~~~~G~~~ 195 (584)
T 2gmh_A 116 ILTEKYRIPVPILPGLPMNNHGNYVVRLGHLVSWMGEQAEALGVEVYPGYAAAEILFHEDGSVKGIATNDVGIQKDGAPK 195 (584)
T ss_dssp EECSSCEEECCCCTTSTTCCTTCEECCHHHHHHHHHHHHHHTTCEEETTCCEEEEEECTTSSEEEEEECCEEECTTSCEE
T ss_pred eeccCCCccccccCccccccCCCEEEeHHHHHHHHHHHHHHcCCEEEcCCEEEEEEEcCCCCEEEEEeCCccccCCCCcc
Confidence 0 1 13456677777888999999999999987653 443 55532 01221
Q ss_pred -----eEEEEcCEEEEeecCCCC
Q 011787 300 -----KTILEADVVLVSAGRTPF 317 (477)
Q Consensus 300 -----~~~i~~D~vi~a~G~~p~ 317 (477)
+.++.+|.||.|.|..+.
T Consensus 196 ~~~~~g~~i~Ad~VV~AdG~~S~ 218 (584)
T 2gmh_A 196 TTFERGLELHAKVTIFAEGCHGH 218 (584)
T ss_dssp EEEECCCEEECSEEEECCCTTCH
T ss_pred cccCCceEEECCEEEEeeCCCch
Confidence 368999999999997653
No 307
>2xag_A Lysine-specific histone demethylase 1; amine oxidase, chromatin regulator, histone inhibitor binding, methylation, nucleosome core, oxidoreductase; HET: FAD TCF; 3.10A {Homo sapiens} PDB: 2xaf_A* 2xah_A* 2xaj_A* 2xaq_A* 2xas_A* 2com_A
Probab=97.75 E-value=2.7e-05 Score=82.69 Aligned_cols=42 Identities=31% Similarity=0.592 Sum_probs=38.7
Q ss_pred CCCCcEEEECCChHHHHHHHHHHHCCCeEEEEecCCCCCcee
Q 011787 41 SDENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGALGGTC 82 (477)
Q Consensus 41 ~~~~dvvIIGgG~AGl~aA~~l~~~g~~V~lie~~~~~GG~~ 82 (477)
...+||+|||||++|++||..|++.|++|+|+|+.+.+||.+
T Consensus 276 ~~~~~v~viG~G~aGl~~A~~l~~~g~~v~v~E~~~~~GG~~ 317 (852)
T 2xag_A 276 KKTGKVIIIGSGVSGLAAARQLQSFGMDVTLLEARDRVGGRV 317 (852)
T ss_dssp SCCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCTTC
T ss_pred CCCCeEEEECCCHHHHHHHHHHHHCCCcEEEEEecCcCCCce
Confidence 346899999999999999999999999999999999999864
No 308
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=97.73 E-value=2e-05 Score=79.16 Aligned_cols=97 Identities=20% Similarity=0.384 Sum_probs=68.1
Q ss_pred CeeEEEcccHHHHHHHHHHHHc--CCcEEEEEeCCCcC---CCCCHH--------HHHH--------------------H
Q 011787 215 KKLVVIGAGYIGLEMGSVWARL--GSEVTVVEFAADIV---PSMDGE--------IRKQ--------------------F 261 (477)
Q Consensus 215 ~~v~IiG~G~~g~e~a~~l~~~--g~~Vtli~~~~~~~---~~~~~~--------~~~~--------------------~ 261 (477)
.+++|||+|+.|+.+|..|++. +.+|+++++.+.+. +.+.+. .... +
T Consensus 12 ~~vvIIGgG~AGl~aA~~L~~~~~g~~V~lie~~~~~~y~r~~lsk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 91 (493)
T 1m6i_A 12 VPFLLIGGGTAAFAAARSIRARDPGARVLIVSEDPELPYMRPPLSKELWFSDDPNVTKTLRFKQWNGKERSIYFQPPSFY 91 (493)
T ss_dssp EEEEEESCSHHHHHHHHHHHHHSTTCEEEEEESSSSCCBCSGGGGTGGGCC--CTHHHHCEEECTTSCEEESBSSCGGGS
T ss_pred CCEEEECChHHHHHHHHHHHhcCCCCeEEEEeCCCCCCCCCCCCCHHhhcCCccchhhcccccccccccccccccchHhh
Confidence 5799999999999999999877 78999999886531 000000 0000 0
Q ss_pred H--HH---HHhcCcEEEeCceEEEEEEcCCeEEEEEeecCCCceEEEEcCEEEEeecCCCCC
Q 011787 262 Q--RS---LEKQKMKFMLKTKVVGVDLSGDGVKLTLEPAAGGEKTILEADVVLVSAGRTPFT 318 (477)
Q Consensus 262 ~--~~---l~~~gv~~~~~~~v~~i~~~~~~~~v~~~~~~~~~~~~i~~D~vi~a~G~~p~~ 318 (477)
. +. +.+.|++++.++++.+++..+.. +++. +++++.+|.+|+|||.+|..
T Consensus 92 ~~~~~l~~~~~~gv~~~~g~~v~~id~~~~~--V~~~-----~g~~i~yd~lviATGs~p~~ 146 (493)
T 1m6i_A 92 VSAQDLPHIENGGVAVLTGKKVVQLDVRDNM--VKLN-----DGSQITYEKCLIATGGTPRS 146 (493)
T ss_dssp BCTTTTTTSTTCEEEEEETCCEEEEEGGGTE--EEET-----TSCEEEEEEEEECCCEEECC
T ss_pred cchhhhhhhhcCCeEEEcCCEEEEEECCCCE--EEEC-----CCCEEECCEEEECCCCCCCC
Confidence 0 00 12468999999999999766554 4443 45689999999999988865
No 309
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=97.73 E-value=0.0002 Score=71.45 Aligned_cols=99 Identities=20% Similarity=0.268 Sum_probs=68.2
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCeEEEEecCCCCCceeeccCccCchhhhhhhHHHHHHHhhhhhCCccccccccChH
Q 011787 43 ENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSVEVDLP 122 (477)
Q Consensus 43 ~~dvvIIGgG~AGl~aA~~l~~~g~~V~lie~~~~~GG~~~~~~~~p~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 122 (477)
..+++|||+|+.|+.+|..|++.|.+|+++++.+.+. |. ++
T Consensus 180 ~~~v~ViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l---------~~----------------------------~~-- 220 (476)
T 3lad_A 180 PGKLGVIGAGVIGLELGSVWARLGAEVTVLEAMDKFL---------PA----------------------------VD-- 220 (476)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSS---------TT----------------------------SC--
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCcEEEEecCCCcC---------cc----------------------------cC--
Confidence 4689999999999999999999999999999854331 00 00
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhCCeEEEEe-EEEEec--CCEEEEEecCCc-eEEEEecEEEEccCCCCCC
Q 011787 123 AMMAQKDKAVSNLTRGIEGLFKKNKVTYVKG-YGKFIS--PSEVSVDTIEGG-NTVVKGKNIIIATGSDVKS 190 (477)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-~~~~~~--~~~~~v~~~~g~-~~~i~~d~lvlAtG~~~~~ 190 (477)
..+...+.+.+++.+++++.+ .+..+. .+...+...++. ..++.+|.||+|+|.+|..
T Consensus 221 ----------~~~~~~l~~~l~~~Gv~v~~~~~v~~i~~~~~~~~v~~~~~~g~~~~~~D~vi~a~G~~p~~ 282 (476)
T 3lad_A 221 ----------EQVAKEAQKILTKQGLKILLGARVTGTEVKNKQVTVKFVDAEGEKSQAFDKLIVAVGRRPVT 282 (476)
T ss_dssp ----------HHHHHHHHHHHHHTTEEEEETCEEEEEEECSSCEEEEEESSSEEEEEEESEEEECSCEEECC
T ss_pred ----------HHHHHHHHHHHHhCCCEEEECCEEEEEEEcCCEEEEEEEeCCCcEEEECCEEEEeeCCcccC
Confidence 001222344566789999877 344433 334555554432 3679999999999988753
No 310
>3g3e_A D-amino-acid oxidase; FAD, flavoprotein, oxidoreductase, PER; HET: FAD G3E; 2.20A {Homo sapiens} PDB: 3cuk_A* 2e48_A* 2e49_A* 2e4a_A* 2e82_A* 2du8_A* 1ve9_A* 1dao_A* 1ddo_A* 1kif_A* 1an9_A* 1evi_A*
Probab=97.71 E-value=1.6e-05 Score=76.10 Aligned_cols=34 Identities=29% Similarity=0.252 Sum_probs=31.3
Q ss_pred CcEEEECCChHHHHHHHHHHHCC------CeEEEEecCCC
Q 011787 44 NDVVVIGGGPGGYVAAIKAAQLG------LKTTCIEKRGA 77 (477)
Q Consensus 44 ~dvvIIGgG~AGl~aA~~l~~~g------~~V~lie~~~~ 77 (477)
+||+|||||++|+++|++|++.| .+|+|+|++..
T Consensus 1 mdVvIIGgGi~Gls~A~~La~~G~~~~p~~~V~vlE~~~~ 40 (351)
T 3g3e_A 1 MRVVVIGAGVIGLSTALCIHERYHSVLQPLDIKVYADRFT 40 (351)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHHTTTSSSCEEEEEESSCG
T ss_pred CcEEEECCCHHHHHHHHHHHHhccccCCCceEEEEECCCC
Confidence 48999999999999999999997 99999999653
No 311
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=97.70 E-value=2e-05 Score=78.25 Aligned_cols=90 Identities=17% Similarity=0.213 Sum_probs=68.7
Q ss_pred CCCeeEEEcccHHHHHHHHHHHHcC--CcEEEEEeCCCcC--------CCC--CHHHHHHHHHHHHhcCcEEEeCceEEE
Q 011787 213 VPKKLVVIGAGYIGLEMGSVWARLG--SEVTVVEFAADIV--------PSM--DGEIRKQFQRSLEKQKMKFMLKTKVVG 280 (477)
Q Consensus 213 ~~~~v~IiG~G~~g~e~a~~l~~~g--~~Vtli~~~~~~~--------~~~--~~~~~~~~~~~l~~~gv~~~~~~~v~~ 280 (477)
.+++++|||+|+.|+.+|..|++.| .+|+++++.+.+. |.+ ..++...+.+.+++.|++++.++.+.
T Consensus 5 ~~~~vvIIG~G~aGl~aA~~l~~~g~~~~V~vie~~~~~gg~~~~g~~p~~~~~~~~~~~~~~~~~~~gv~~~~~~~v~- 83 (460)
T 1cjc_A 5 QTPQICVVGSGPAGFYTAQHLLKHHSRAHVDIYEKQLVPFGLVRFGVAPDHPEVKNVINTFTQTARSDRCAFYGNVEVG- 83 (460)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHHCSSCEEEEECSSSSSCTHHHHTSCTTCGGGGGHHHHHHHHHTSTTEEEEBSCCBT-
T ss_pred CCceEEEECcCHHHHHHHHHHHhcCCCCCEEEEeCCCcCCceeecccCCCCccHHHHHHHHHHHHHhCCcEEEeeeEEe-
Confidence 3578999999999999999999998 8999999987664 322 23566777788888999999887651
Q ss_pred EEEcCCeEEEEEeecCCCceEEEEcCEEEEeecCCC
Q 011787 281 VDLSGDGVKLTLEPAAGGEKTILEADVVLVSAGRTP 316 (477)
Q Consensus 281 i~~~~~~~~v~~~~~~~~~~~~i~~D~vi~a~G~~p 316 (477)
.. +++. + ..+.+|.||+|+|..|
T Consensus 84 -----~~--V~~~-----~-~~~~~d~lVlAtGs~~ 106 (460)
T 1cjc_A 84 -----RD--VTVQ-----E-LQDAYHAVVLSYGAED 106 (460)
T ss_dssp -----TT--BCHH-----H-HHHHSSEEEECCCCCE
T ss_pred -----eE--EEec-----c-ceEEcCEEEEecCcCC
Confidence 11 2221 1 2468999999999885
No 312
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=97.70 E-value=0.00022 Score=71.28 Aligned_cols=99 Identities=20% Similarity=0.111 Sum_probs=67.3
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCeEEEEecCCCCCceeeccCccCchhhhhhhHHHHHHHhhhhhCCccccccccChH
Q 011787 43 ENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSVEVDLP 122 (477)
Q Consensus 43 ~~dvvIIGgG~AGl~aA~~l~~~g~~V~lie~~~~~GG~~~~~~~~p~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 122 (477)
..+++|||||+.|+.+|..|++.|.+|+++++.+.+. |. . +
T Consensus 187 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l---------~~-----~-----------------------d-- 227 (478)
T 3dk9_A 187 PGRSVIVGAGYIAVEMAGILSALGSKTSLMIRHDKVL---------RS-----F-----------------------D-- 227 (478)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSC---------TT-----S-----------------------C--
T ss_pred CccEEEECCCHHHHHHHHHHHHcCCeEEEEEeCCccc---------cc-----c-----------------------C--
Confidence 4689999999999999999999999999999854321 00 0 0
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhCCeEEEEeE-EEEec---CC-EEEEEecC---Cce--EEEEecEEEEccCCCCCC
Q 011787 123 AMMAQKDKAVSNLTRGIEGLFKKNKVTYVKGY-GKFIS---PS-EVSVDTIE---GGN--TVVKGKNIIIATGSDVKS 190 (477)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~~---~~-~~~v~~~~---g~~--~~i~~d~lvlAtG~~~~~ 190 (477)
..+.+.+.+.+++.+++++.+. +..+. .. .+.+...+ |+. ..+.+|.||+|+|.+|..
T Consensus 228 ----------~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~~~~~~v~~~~~~~g~~~g~~~~~D~vi~a~G~~p~~ 295 (478)
T 3dk9_A 228 ----------SMISTNCTEELENAGVEVLKFSQVKEVKKTLSGLEVSMVTAVPGRLPVMTMIPDVDCLLWAIGRVPNT 295 (478)
T ss_dssp ----------HHHHHHHHHHHHHTTCEEETTEEEEEEEECSSSEEEEEEECCTTSCCEEEEEEEESEEEECSCEEESC
T ss_pred ----------HHHHHHHHHHHHHCCCEEEeCCEEEEEEEcCCCcEEEEEEccCCCCcccceEEEcCEEEEeeccccCC
Confidence 0011223445667789888763 44443 22 35565554 221 679999999999988753
No 313
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=97.66 E-value=0.00047 Score=68.53 Aligned_cols=95 Identities=18% Similarity=0.256 Sum_probs=67.8
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCeEEEEecCCCCCceeeccCccCchhhhhhhHHHHHHHhhhhhCCccccccccChH
Q 011787 43 ENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSVEVDLP 122 (477)
Q Consensus 43 ~~dvvIIGgG~AGl~aA~~l~~~g~~V~lie~~~~~GG~~~~~~~~p~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 122 (477)
..+++|||+|+.|+.+|..|++.|.+|+++++.+.+. |. ++
T Consensus 170 ~~~v~ViGgG~~g~e~A~~l~~~g~~Vt~v~~~~~~l---------~~----------------------------~~-- 210 (463)
T 4dna_A 170 PESILIAGGGYIAVEFANIFHGLGVKTTLIYRGKEIL---------SR----------------------------FD-- 210 (463)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSS---------TT----------------------------SC--
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCeEEEEEcCCccc---------cc----------------------------cC--
Confidence 4689999999999999999999999999999854321 00 00
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhCCeEEEEe-EEEEecC---CEEEEE-ecCCceEEEEecEEEEccCCCCC
Q 011787 123 AMMAQKDKAVSNLTRGIEGLFKKNKVTYVKG-YGKFISP---SEVSVD-TIEGGNTVVKGKNIIIATGSDVK 189 (477)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-~~~~~~~---~~~~v~-~~~g~~~~i~~d~lvlAtG~~~~ 189 (477)
..+...+.+.+++.+++++.+ .+..+.. ..+.|. +.+| + +.+|.||+|+|.+|.
T Consensus 211 ----------~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~~v~~~~~g--~-i~aD~Vv~a~G~~p~ 269 (463)
T 4dna_A 211 ----------QDMRRGLHAAMEEKGIRILCEDIIQSVSADADGRRVATTMKHG--E-IVADQVMLALGRMPN 269 (463)
T ss_dssp ----------HHHHHHHHHHHHHTTCEEECSCCEEEEEECTTSCEEEEESSSC--E-EEESEEEECSCEEES
T ss_pred ----------HHHHHHHHHHHHHCCCEEECCCEEEEEEEcCCCEEEEEEcCCC--e-EEeCEEEEeeCcccC
Confidence 001222345566789998876 3444432 235677 7777 4 999999999999875
No 314
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=97.64 E-value=0.0002 Score=71.63 Aligned_cols=96 Identities=19% Similarity=0.249 Sum_probs=67.8
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCeEEEEecCCCCCceeeccCccCchhhhhhhHHHHHHHhhhhhCCccccccccChH
Q 011787 43 ENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSVEVDLP 122 (477)
Q Consensus 43 ~~dvvIIGgG~AGl~aA~~l~~~g~~V~lie~~~~~GG~~~~~~~~p~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 122 (477)
..+++|||+|+.|+.+|..|++.|.+|+++++.+.+. |. ++
T Consensus 191 ~~~v~ViGgG~~g~e~A~~l~~~g~~Vtli~~~~~~l---------~~----------------------------~~-- 231 (484)
T 3o0h_A 191 PKSIVIVGGGYIGVEFANIFHGLGVKTTLLHRGDLIL---------RN----------------------------FD-- 231 (484)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSS---------TT----------------------------SC--
T ss_pred CCcEEEECcCHHHHHHHHHHHHcCCeEEEEECCCccc---------cc----------------------------cC--
Confidence 4689999999999999999999999999999854321 00 00
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhCCeEEEEe-EEEEe--cCCEEEEEecCCceEEEEecEEEEccCCCCC
Q 011787 123 AMMAQKDKAVSNLTRGIEGLFKKNKVTYVKG-YGKFI--SPSEVSVDTIEGGNTVVKGKNIIIATGSDVK 189 (477)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-~~~~~--~~~~~~v~~~~g~~~~i~~d~lvlAtG~~~~ 189 (477)
..+...+.+.+++.+++++.+ .+..+ +.+.+.+.+.+| .++.+|.||+|+|.+|.
T Consensus 232 ----------~~~~~~l~~~l~~~Gv~i~~~~~V~~i~~~~~~v~v~~~~g--~~i~aD~Vi~A~G~~p~ 289 (484)
T 3o0h_A 232 ----------YDLRQLLNDAMVAKGISIIYEATVSQVQSTENCYNVVLTNG--QTICADRVMLATGRVPN 289 (484)
T ss_dssp ----------HHHHHHHHHHHHHHTCEEESSCCEEEEEECSSSEEEEETTS--CEEEESEEEECCCEEEC
T ss_pred ----------HHHHHHHHHHHHHCCCEEEeCCEEEEEEeeCCEEEEEECCC--cEEEcCEEEEeeCCCcC
Confidence 001122334455668888875 34443 234467777777 68999999999998875
No 315
>3c4n_A Uncharacterized protein DR_0571; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.40A {Deinococcus radiodurans R1}
Probab=97.63 E-value=7.5e-05 Score=72.95 Aligned_cols=33 Identities=33% Similarity=0.460 Sum_probs=30.3
Q ss_pred CeeEEEcccHHHHHHHHHHHHc--CCcEEEEEeCC
Q 011787 215 KKLVVIGAGYIGLEMGSVWARL--GSEVTVVEFAA 247 (477)
Q Consensus 215 ~~v~IiG~G~~g~e~a~~l~~~--g~~Vtli~~~~ 247 (477)
.+|+|||+|.+|+.+|..|++. |.+|+++++.+
T Consensus 37 ~dVvIIGaGi~Gls~A~~La~~~pG~~V~vlE~~~ 71 (405)
T 3c4n_A 37 FDIVVIGAGRMGAACAFYLRQLAPGRSLLLVEEGG 71 (405)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSC
T ss_pred CCEEEECCcHHHHHHHHHHHhcCCCCeEEEEeCCC
Confidence 4799999999999999999999 99999998753
No 316
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=97.62 E-value=0.00026 Score=70.84 Aligned_cols=97 Identities=13% Similarity=0.139 Sum_probs=66.2
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCeEEEEecCCCCCceeeccCccCchhhhhhhHHHHHHHhhhhhCCccccccccChH
Q 011787 43 ENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSVEVDLP 122 (477)
Q Consensus 43 ~~dvvIIGgG~AGl~aA~~l~~~g~~V~lie~~~~~GG~~~~~~~~p~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 122 (477)
..+++|||||+.|+.+|..|++.|.+|+++++...+ |. . +
T Consensus 187 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~l----------~~-----~-----------------------d-- 226 (483)
T 3dgh_A 187 PGKTLVVGAGYIGLECAGFLKGLGYEPTVMVRSIVL----------RG-----F-----------------------D-- 226 (483)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSCSS----------TT-----S-----------------------C--
T ss_pred CCcEEEECCCHHHHHHHHHHHHcCCEEEEEeCCCCC----------cc-----c-----------------------C--
Confidence 358999999999999999999999999999873211 00 0 0
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhCCeEEEEeE-EEEec---CCEEEEEecCC---ceEEEEecEEEEccCCCCC
Q 011787 123 AMMAQKDKAVSNLTRGIEGLFKKNKVTYVKGY-GKFIS---PSEVSVDTIEG---GNTVVKGKNIIIATGSDVK 189 (477)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~~---~~~~~v~~~~g---~~~~i~~d~lvlAtG~~~~ 189 (477)
..+...+.+.+++.+++++.+. +..+. ...+.+...++ +..++.+|.||+|+|.+|.
T Consensus 227 ----------~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~~v~~~~~~~~~~~~~~~D~vi~a~G~~p~ 290 (483)
T 3dgh_A 227 ----------QQMAELVAASMEERGIPFLRKTVPLSVEKQDDGKLLVKYKNVETGEESEDVYDTVLWAIGRKGL 290 (483)
T ss_dssp ----------HHHHHHHHHHHHHTTCCEEETEEEEEEEECTTSCEEEEEEETTTCCEEEEEESEEEECSCEEEC
T ss_pred ----------HHHHHHHHHHHHhCCCEEEeCCEEEEEEEcCCCcEEEEEecCCCCceeEEEcCEEEECcccccC
Confidence 0012223455667899988874 44442 23345554443 3457999999999998874
No 317
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=97.60 E-value=0.00039 Score=70.15 Aligned_cols=97 Identities=15% Similarity=0.229 Sum_probs=64.2
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCeEEEEecCCCCCceeeccCccCchhhhhhhHHHHHHHhhhhhCCccccccccChH
Q 011787 43 ENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSVEVDLP 122 (477)
Q Consensus 43 ~~dvvIIGgG~AGl~aA~~l~~~g~~V~lie~~~~~GG~~~~~~~~p~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 122 (477)
..+++|||||+.|+.+|..|++.|.+|+++++...+ |. ++
T Consensus 210 ~~~vvVIGgG~ig~E~A~~l~~~G~~Vtlv~~~~~l----------~~----------------------------~d-- 249 (519)
T 3qfa_A 210 PGKTLVVGASYVALECAGFLAGIGLDVTVMVRSILL----------RG----------------------------FD-- 249 (519)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEESSCSS----------TT----------------------------SC--
T ss_pred CCeEEEECCcHHHHHHHHHHHHcCCeEEEEeccccc----------cc----------------------------CC--
Confidence 357999999999999999999999999999983211 00 00
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhCCeEEEEeE----EEEecC---CEEEEE--ecCCc-eEEEEecEEEEccCCCCC
Q 011787 123 AMMAQKDKAVSNLTRGIEGLFKKNKVTYVKGY----GKFISP---SEVSVD--TIEGG-NTVVKGKNIIIATGSDVK 189 (477)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~----~~~~~~---~~~~v~--~~~g~-~~~i~~d~lvlAtG~~~~ 189 (477)
..+...+.+.+++.+|+++.+. +...+. ..+.+. ..++. ..++.+|.||+|+|.+|.
T Consensus 250 ----------~~~~~~~~~~l~~~GV~v~~~~~v~~v~~~~~~~~~~~~v~~~~~~g~~~~~~~~D~vi~a~G~~p~ 316 (519)
T 3qfa_A 250 ----------QDMANKIGEHMEEHGIKFIRQFVPIKVEQIEAGTPGRLRVVAQSTNSEEIIEGEYNTVMLAIGRDAC 316 (519)
T ss_dssp ----------HHHHHHHHHHHHHTTCEEEESEEEEEEEEEECCTTCEEEEEEEESSSSCEEEEEESEEEECSCEEES
T ss_pred ----------HHHHHHHHHHHHHCCCEEEeCCeEEEEEEccCCCCceEEEEEEECCCcEEEEEECCEEEEecCCccc
Confidence 0012223345667899988773 222222 334443 34442 246789999999998884
No 318
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=97.58 E-value=3e-05 Score=76.86 Aligned_cols=91 Identities=20% Similarity=0.294 Sum_probs=67.9
Q ss_pred CCeeEEEcccHHHHHHHHHHHH-c------CCcEEEEEeCCCcC--------CC--CCHHHHHHHHHHHHhcCcEEEeCc
Q 011787 214 PKKLVVIGAGYIGLEMGSVWAR-L------GSEVTVVEFAADIV--------PS--MDGEIRKQFQRSLEKQKMKFMLKT 276 (477)
Q Consensus 214 ~~~v~IiG~G~~g~e~a~~l~~-~------g~~Vtli~~~~~~~--------~~--~~~~~~~~~~~~l~~~gv~~~~~~ 276 (477)
+++|+|||+|+.|+.+|..|++ . |.+|+++++.+.+. |. ...++...+.+.+++.|++++.+.
T Consensus 3 ~~~VvIIG~G~aGl~aA~~L~~~~~~~~~~g~~V~lie~~~~~gg~~~~gv~p~~~~~~~~~~~~~~~~~~~~v~~~~~v 82 (456)
T 1lqt_A 3 PYYIAIVGSGPSAFFAAASLLKAADTTEDLDMAVDMLEMLPTPWGLVRSGVAPDHPKIKSISKQFEKTAEDPRFRFFGNV 82 (456)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHHHHSTTCCEEEEEEESSSSCSTHHHHTSCTTCTGGGGGHHHHHHHHTSTTEEEEESC
T ss_pred CCEEEEECcCHHHHHHHHHHHhhCccccCCCCeEEEEecCCCCCCccccccCCCCCCHHHHHHHHHHHHhcCCCEEEeeE
Confidence 4689999999999999999999 7 89999999987653 21 224566777788888899999875
Q ss_pred eEEEEEEcCCeEEEEEeecCCCceEEEEcCEEEEeecCC-CCC
Q 011787 277 KVVGVDLSGDGVKLTLEPAAGGEKTILEADVVLVSAGRT-PFT 318 (477)
Q Consensus 277 ~v~~i~~~~~~~~v~~~~~~~~~~~~i~~D~vi~a~G~~-p~~ 318 (477)
.+ +.. +++. ++ .+.+|.||+|+|.. |+.
T Consensus 83 ~v------~~~--v~~~-----~~-~~~~d~lViAtG~~~~~~ 111 (456)
T 1lqt_A 83 VV------GEH--VQPG-----EL-SERYDAVIYAVGAQSDRM 111 (456)
T ss_dssp CB------TTT--BCHH-----HH-HHHSSEEEECCCCCEECC
T ss_pred EE------CCE--EEEC-----CC-eEeCCEEEEeeCCCCCCC
Confidence 43 122 2222 22 47899999999997 443
No 319
>2dkh_A 3-hydroxybenzoate hydroxylase; flavoprotein, monooxygenase, complex, oxidoreductase; HET: FAD 3HB; 1.80A {Comamonas testosteroni} PDB: 2dki_A*
Probab=97.57 E-value=0.00043 Score=71.72 Aligned_cols=102 Identities=17% Similarity=0.300 Sum_probs=76.3
Q ss_pred CeeEEEcccHHHHHHHHHHHH-cCCcEEEEEeCCCcCC------------------------------------------
Q 011787 215 KKLVVIGAGYIGLEMGSVWAR-LGSEVTVVEFAADIVP------------------------------------------ 251 (477)
Q Consensus 215 ~~v~IiG~G~~g~e~a~~l~~-~g~~Vtli~~~~~~~~------------------------------------------ 251 (477)
.+|+|||+|+.|+-+|..|++ .|.+|+++++.+....
T Consensus 33 ~dVlIVGaGpaGL~~A~~La~~~G~~V~viEr~~~~~~~g~a~~l~~~t~e~l~~lGl~~~~~~~~~~~~~~~~~~~~~~ 112 (639)
T 2dkh_A 33 VDVLIVGCGPAGLTLAAQLAAFPDIRTCIVEQKEGPMELGQADGIACRTMEMFEAFEFADSILKEACWINDVTFWKPDPG 112 (639)
T ss_dssp EEEEEECCSHHHHHHHHHHTTCTTSCEEEECSSSSCCSSCSCCEECHHHHHHHHHTTCHHHHHHHSEEECEEEEEEECTT
T ss_pred CcEEEECcCHHHHHHHHHHHHhCCCCEEEEeCCCCCCCCCceeeeCHHHHHHHHHcCcHHHHHHhcccccceEEECCCCC
Confidence 469999999999999999999 9999999987653210
Q ss_pred -------------------C-----CC-HHHHHHHHHHHHhcCc--EEEeCceEEEEEEcCC----eEEEEEeec---CC
Q 011787 252 -------------------S-----MD-GEIRKQFQRSLEKQKM--KFMLKTKVVGVDLSGD----GVKLTLEPA---AG 297 (477)
Q Consensus 252 -------------------~-----~~-~~~~~~~~~~l~~~gv--~~~~~~~v~~i~~~~~----~~~v~~~~~---~~ 297 (477)
. ++ ..+.+.+.+.+++.|+ ++++++++++++.+++ .+.+++.+. .+
T Consensus 113 ~~g~~~~~~~~~~~~~~~~~~~~~~i~q~~l~~~L~~~a~~~g~~v~v~~~~~v~~l~~~~~~~~~~v~v~~~~~~~~~~ 192 (639)
T 2dkh_A 113 QPGRIARHGRVQDTEDGLSEFPHVILNQARVHDHYLERMRNSPSRLEPHYARRVLDVKVDHGAADYPVTVTLERCDAAHA 192 (639)
T ss_dssp STTCEEEEEEEESSCTTSCSSCEEECCHHHHHHHHHHHHHHSTTCCCCBCSEEEEEEEECTTCSSCCEEEEEEECSGGGT
T ss_pred CCcceEeecccCcccCCCCCCceEeeCHHHHHHHHHHHHHhCCCCcEEecCCEEEEEEECCCCCcCCEEEEEEeccccCC
Confidence 0 00 2455566777777876 9999999999987652 577776531 13
Q ss_pred CceEEEEcCEEEEeecCCC
Q 011787 298 GEKTILEADVVLVSAGRTP 316 (477)
Q Consensus 298 ~~~~~i~~D~vi~a~G~~p 316 (477)
+...++.+|+||.|.|...
T Consensus 193 G~~~~i~a~~vVgADG~~S 211 (639)
T 2dkh_A 193 GQIETVQARYVVGCDGARS 211 (639)
T ss_dssp TCEEEEEEEEEEECCCTTC
T ss_pred CCeEEEEeCEEEECCCcch
Confidence 4447899999999999653
No 320
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=97.55 E-value=0.00057 Score=70.32 Aligned_cols=33 Identities=24% Similarity=0.185 Sum_probs=30.6
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCeEEEEecC
Q 011787 43 ENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKR 75 (477)
Q Consensus 43 ~~dvvIIGgG~AGl~aA~~l~~~g~~V~lie~~ 75 (477)
..+++|||||+.|+.+|..|++.|.+|+++++.
T Consensus 286 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~ 318 (598)
T 2x8g_A 286 PGKTLVIGASYVALECAGFLASLGGDVTVMVRS 318 (598)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCEEEEEECC
Confidence 357999999999999999999999999999984
No 321
>1pn0_A Phenol 2-monooxygenase; two dimers, TLS refinement, oxidoreductase; HET: FAD; 1.70A {Trichosporon cutaneum} SCOP: c.3.1.2 c.47.1.10 d.16.1.2 PDB: 1foh_A*
Probab=97.53 E-value=0.00071 Score=70.34 Aligned_cols=34 Identities=21% Similarity=0.372 Sum_probs=30.7
Q ss_pred CeeEEEcccHHHHHHHHHHHH-----cCCcEEEEEeCCC
Q 011787 215 KKLVVIGAGYIGLEMGSVWAR-----LGSEVTVVEFAAD 248 (477)
Q Consensus 215 ~~v~IiG~G~~g~e~a~~l~~-----~g~~Vtli~~~~~ 248 (477)
..|+|||+|+.|+-+|..|++ .|.+|+++++.+.
T Consensus 9 ~dVlIVGaGpaGL~lA~~La~~~~~~~Gi~v~viE~~~~ 47 (665)
T 1pn0_A 9 CDVLIVGAGPAGLMAARVLSEYVRQKPDLKVRIIDKRST 47 (665)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHHHSTTCCEEEECSSSS
T ss_pred CcEEEECcCHHHHHHHHHHhccccccCCCCEEEEeCCCC
Confidence 369999999999999999999 9999999997653
No 322
>4at0_A 3-ketosteroid-delta4-5alpha-dehydrogenase; oxidoreductase, dehydogenase, steroid catabolism; HET: FAD; 1.60A {Rhodococcus jostii} PDB: 4at2_A*
Probab=97.52 E-value=0.00076 Score=67.92 Aligned_cols=59 Identities=15% Similarity=0.169 Sum_probs=42.5
Q ss_pred HHHHHHHHHHHhcCcEEEeCceEEEEEEc-CCeEE-EEEeecCCCceEEEEcC-EEEEeecCCC
Q 011787 256 EIRKQFQRSLEKQKMKFMLKTKVVGVDLS-GDGVK-LTLEPAAGGEKTILEAD-VVLVSAGRTP 316 (477)
Q Consensus 256 ~~~~~~~~~l~~~gv~~~~~~~v~~i~~~-~~~~~-v~~~~~~~~~~~~i~~D-~vi~a~G~~p 316 (477)
.+...+.+.+++.|++++++++++++..+ ++++. +.+.. ++...++.+| .||+|+|-..
T Consensus 203 ~l~~~L~~~~~~~Gv~i~~~t~v~~L~~~~~g~v~GV~~~~--~g~~~~i~A~k~VVlAtGG~~ 264 (510)
T 4at0_A 203 MLMKPLVETAEKLGVRAEYDMRVQTLVTDDTGRVVGIVAKQ--YGKEVAVRARRGVVLATGSFA 264 (510)
T ss_dssp HHHHHHHHHHHHTTCEEECSEEEEEEEECTTCCEEEEEEEE--TTEEEEEEEEEEEEECCCCCT
T ss_pred HHHHHHHHHHHHcCCEEEecCEeEEEEECCCCcEEEEEEEE--CCcEEEEEeCCeEEEeCCChh
Confidence 34455566677889999999999999887 45554 55443 2334579996 9999999654
No 323
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=97.50 E-value=7.3e-05 Score=78.06 Aligned_cols=87 Identities=28% Similarity=0.388 Sum_probs=66.5
Q ss_pred CCeeEEEcccHHHHHHHHHHHHcCCcEEEEEeCCCcC---------CCCC--HHHHHHHHHHHHhcCcEEEeCceEEEEE
Q 011787 214 PKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIV---------PSMD--GEIRKQFQRSLEKQKMKFMLKTKVVGVD 282 (477)
Q Consensus 214 ~~~v~IiG~G~~g~e~a~~l~~~g~~Vtli~~~~~~~---------~~~~--~~~~~~~~~~l~~~gv~~~~~~~v~~i~ 282 (477)
.++|+|||||+.|+.+|..+++.|.+|+++++.+.+. +... .+....+.+.+++.|+++++++.+..
T Consensus 373 ~~~vvIIGgG~AGl~aA~~l~~~g~~V~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~~~v~~-- 450 (671)
T 1ps9_A 373 KKNLAVVGAGPAGLAFAINAAARGHQVTLFDAHSEIGGQFNIAKQIPGKEEFYETLRYYRRMIEVTGVTLKLNHTVTA-- 450 (671)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSSSCTTHHHHTTSTTCTTHHHHHHHHHHHHHHHTCEEEESCCCCS--
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCCCCeeeccccCCCHHHHHHHHHHHHHHHHHcCCEEEeCcEecH--
Confidence 4689999999999999999999999999999887542 1111 23445566777888999998875431
Q ss_pred EcCCeEEEEEeecCCCceEEE-EcCEEEEeecCCCCCCC
Q 011787 283 LSGDGVKLTLEPAAGGEKTIL-EADVVLVSAGRTPFTAG 320 (477)
Q Consensus 283 ~~~~~~~v~~~~~~~~~~~~i-~~D~vi~a~G~~p~~~~ 320 (477)
..+ .+|.||+|||.+|+...
T Consensus 451 ------------------~~~~~~d~lviAtG~~p~~~~ 471 (671)
T 1ps9_A 451 ------------------DQLQAFDETILASGIVPRTPP 471 (671)
T ss_dssp ------------------SSSCCSSEEEECCCEEECCCC
T ss_pred ------------------HHhhcCCEEEEccCCCcCCCC
Confidence 113 79999999999887653
No 324
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=97.49 E-value=0.00041 Score=75.29 Aligned_cols=106 Identities=17% Similarity=0.189 Sum_probs=72.9
Q ss_pred CCeeEEEcccHHHHHHHHHHHHcCCcEEEEEeCCCcC---CC-----C----CHHHHHHHHHHHHhc-CcEEEeCceEEE
Q 011787 214 PKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIV---PS-----M----DGEIRKQFQRSLEKQ-KMKFMLKTKVVG 280 (477)
Q Consensus 214 ~~~v~IiG~G~~g~e~a~~l~~~g~~Vtli~~~~~~~---~~-----~----~~~~~~~~~~~l~~~-gv~~~~~~~v~~ 280 (477)
..+|+|||+|+.|+.+|..+++.|.+|+++++.+.+. .. + ..+....+.+.+.+. +++++.++.|..
T Consensus 128 ~~dVvVIGaGpAGl~AA~~la~~G~~V~lie~~~~~GG~~~~~~k~~i~~~~~~~~~~~~~~~l~~~~~v~~~~~~~V~~ 207 (965)
T 2gag_A 128 HTDVLVVGAGPAGLAAAREASRSGARVMLLDERAEAGGTLLDTAGEQIDGMDSSAWIEQVTSELAEAEETTHLQRTTVFG 207 (965)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSSGGGGGSSCCEETTEEHHHHHHHHHHHHHHSTTEEEESSEEEEE
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCcEEEEeCCCCCCceeccCCccccCCCCHHHHHHHHHHHHhhcCCcEEEeCCEEEe
Confidence 3579999999999999999999999999999876542 01 1 123334445556664 999999999998
Q ss_pred EEEcCCeEEEEEee----cC------CCceEEEEcCEEEEeecCCCCCC
Q 011787 281 VDLSGDGVKLTLEP----AA------GGEKTILEADVVLVSAGRTPFTA 319 (477)
Q Consensus 281 i~~~~~~~~v~~~~----~~------~~~~~~i~~D~vi~a~G~~p~~~ 319 (477)
+...+....+.... .. .+++..+.+|.+|+|||..|...
T Consensus 208 i~~~~~~~~v~~~~~~~~v~~~~~~~~~~~~~i~~d~lVlATGs~p~~~ 256 (965)
T 2gag_A 208 SYDANYLIAAQRRTVHLDGPSGPGVSRERIWHIRAKQVVLATGAHERPI 256 (965)
T ss_dssp EETTTEEEEEEECSTTCSSCCCTTCCSEEEEEEEEEEEEECCCEEECCC
T ss_pred eecCCceeeeEeecccccccccccCCCCceEEEECCEEEECCCCccCCC
Confidence 86432211121100 00 02235799999999999987654
No 325
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=97.49 E-value=4e-05 Score=83.76 Aligned_cols=93 Identities=19% Similarity=0.276 Sum_probs=70.6
Q ss_pred CCeeEEEcccHHHHHHHHHHHHcCC-cEEEEEeCCCcC-------C--CCCHHHHHHHHHHHHhcCcEEEeCceEEEEEE
Q 011787 214 PKKLVVIGAGYIGLEMGSVWARLGS-EVTVVEFAADIV-------P--SMDGEIRKQFQRSLEKQKMKFMLKTKVVGVDL 283 (477)
Q Consensus 214 ~~~v~IiG~G~~g~e~a~~l~~~g~-~Vtli~~~~~~~-------~--~~~~~~~~~~~~~l~~~gv~~~~~~~v~~i~~ 283 (477)
+++|+|||+|+.|+.+|..|++.|. +|+++++.+.+. | .++.+..++..+.+++.||++++++.+..
T Consensus 187 ~~~VvVIGgGpAGl~aA~~L~~~G~~~Vtv~E~~~~~GG~~~~~ip~~~~~~~~~~~~~~~~~~~gv~~~~~~~v~~--- 263 (1025)
T 1gte_A 187 SAKIALLGAGPASISCASFLARLGYSDITIFEKQEYVGGLSTSEIPQFRLPYDVVNFEIELMKDLGVKIICGKSLSE--- 263 (1025)
T ss_dssp GCCEEEECCSHHHHHHHHHHHHTTCCCEEEEESSSSCSTHHHHTSCTTTSCHHHHHHHHHHHHTTTCEEEESCCBST---
T ss_pred CCEEEEECccHHHHHHHHHHHhcCCCcEEEEeCCCCCCccccccCCcccCCHHHHHHHHHHHHHCCcEEEcccEecc---
Confidence 5789999999999999999999998 799999886542 2 23556666677888899999998877631
Q ss_pred cCCeEEEEEeecCCCceEEEEcCEEEEeecC-CCCC
Q 011787 284 SGDGVKLTLEPAAGGEKTILEADVVLVSAGR-TPFT 318 (477)
Q Consensus 284 ~~~~~~v~~~~~~~~~~~~i~~D~vi~a~G~-~p~~ 318 (477)
.. +++. ++..+.+|.||+|+|. +|..
T Consensus 264 --~~--v~~~-----~~~~~~~d~vvlAtGa~~p~~ 290 (1025)
T 1gte_A 264 --NE--ITLN-----TLKEEGYKAAFIGIGLPEPKT 290 (1025)
T ss_dssp --TS--BCHH-----HHHHTTCCEEEECCCCCEECC
T ss_pred --ce--EEhh-----hcCccCCCEEEEecCCCCCCC
Confidence 11 2221 2335679999999998 4764
No 326
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=97.49 E-value=0.00068 Score=70.96 Aligned_cols=99 Identities=16% Similarity=0.085 Sum_probs=70.6
Q ss_pred CCcEEEEC--CChHHHHHHHHHHHCCCeEEEEecCCCCCceeeccCccCchhhhhhhHHHHHHHhhhhhCCccccccccC
Q 011787 43 ENDVVVIG--GGPGGYVAAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSVEVD 120 (477)
Q Consensus 43 ~~dvvIIG--gG~AGl~aA~~l~~~g~~V~lie~~~~~GG~~~~~~~~p~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~~ 120 (477)
..+|+||| +|..|+.+|..|++.|.+|+++++.+.+.... ... .
T Consensus 523 g~~VvViG~ggG~~g~e~A~~L~~~g~~Vtlv~~~~~l~~~~------------~~~----------------------~ 568 (690)
T 3k30_A 523 GKKVVVYDDDHYYLGGVVAELLAQKGYEVSIVTPGAQVSSWT------------NNT----------------------F 568 (690)
T ss_dssp SSEEEEEECSCSSHHHHHHHHHHHTTCEEEEEESSSSTTGGG------------GGG----------------------T
T ss_pred CCEEEEEcCCCCccHHHHHHHHHhCCCeeEEEeccccccccc------------ccc----------------------h
Confidence 45799999 99999999999999999999999865432100 000 0
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhhhCCeEEEEe-EEEEecCCEEEEEec-CCceEEEEecEEEEccCCCCC
Q 011787 121 LPAMMAQKDKAVSNLTRGIEGLFKKNKVTYVKG-YGKFISPSEVSVDTI-EGGNTVVKGKNIIIATGSDVK 189 (477)
Q Consensus 121 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-~~~~~~~~~~~v~~~-~g~~~~i~~d~lvlAtG~~~~ 189 (477)
....+...+++.+|+++.+ .+..++.+...+... +++..++.+|.||+|+|.+|.
T Consensus 569 --------------~~~~l~~~l~~~GV~i~~~~~V~~i~~~~~~v~~~~~~~~~~i~aD~VV~A~G~~p~ 625 (690)
T 3k30_A 569 --------------EVNRIQRRLIENGVARVTDHAVVAVGAGGVTVRDTYASIERELECDAVVMVTARLPR 625 (690)
T ss_dssp --------------CHHHHHHHHHHTTCEEEESEEEEEEETTEEEEEETTTCCEEEEECSEEEEESCEEEC
T ss_pred --------------hHHHHHHHHHHCCCEEEcCcEEEEEECCeEEEEEccCCeEEEEECCEEEECCCCCCC
Confidence 0111234566789999988 466677777666532 334478999999999999875
No 327
>1pn0_A Phenol 2-monooxygenase; two dimers, TLS refinement, oxidoreductase; HET: FAD; 1.70A {Trichosporon cutaneum} SCOP: c.3.1.2 c.47.1.10 d.16.1.2 PDB: 1foh_A*
Probab=97.45 E-value=8.3e-05 Score=77.35 Aligned_cols=36 Identities=36% Similarity=0.566 Sum_probs=33.1
Q ss_pred CCcEEEECCChHHHHHHHHHHH-----CCCeEEEEecCCCC
Q 011787 43 ENDVVVIGGGPGGYVAAIKAAQ-----LGLKTTCIEKRGAL 78 (477)
Q Consensus 43 ~~dvvIIGgG~AGl~aA~~l~~-----~g~~V~lie~~~~~ 78 (477)
++||+||||||+|+++|..|++ .|.+|+|||+.+..
T Consensus 8 ~~dVlIVGaGpaGL~lA~~La~~~~~~~Gi~v~viE~~~~~ 48 (665)
T 1pn0_A 8 YCDVLIVGAGPAGLMAARVLSEYVRQKPDLKVRIIDKRSTK 48 (665)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHHHHSTTCCEEEECSSSSC
T ss_pred CCcEEEECcCHHHHHHHHHHhccccccCCCCEEEEeCCCCC
Confidence 5899999999999999999999 99999999997543
No 328
>2aqj_A Tryptophan halogenase, pRNA; flavin-dependent halogenase, helical bundle, sandwiched sheets, structural genomics; HET: TRP FAD; 1.80A {Pseudomonas fluorescens} PDB: 2apg_A* 2ar8_A* 2ard_A* 2jkc_A*
Probab=97.42 E-value=0.0013 Score=66.60 Aligned_cols=53 Identities=25% Similarity=0.330 Sum_probs=38.9
Q ss_pred HHHHHHHhcCcEEEeCceEEEEEEcCCe--EEEEEeecCCCceEEEEcCEEEEeecCCCCC
Q 011787 260 QFQRSLEKQKMKFMLKTKVVGVDLSGDG--VKLTLEPAAGGEKTILEADVVLVSAGRTPFT 318 (477)
Q Consensus 260 ~~~~~l~~~gv~~~~~~~v~~i~~~~~~--~~v~~~~~~~~~~~~i~~D~vi~a~G~~p~~ 318 (477)
.+.+.+++.|++++.+ +|+++..++++ +.+.+. +++++.+|.||.|+|..+..
T Consensus 170 ~L~~~a~~~gv~~~~~-~v~~i~~~~~g~~~~v~~~-----~g~~i~ad~vV~A~G~~s~~ 224 (538)
T 2aqj_A 170 FLKRWAVERGVNRVVD-EVVDVRLNNRGYISNLLTK-----EGRTLEADLFIDCSGMRGLL 224 (538)
T ss_dssp HHHHHHHHTTCEEEEC-CEEEEEECTTSCEEEEEET-----TSCEECCSEEEECCGGGCCC
T ss_pred HHHHHHHHCCCEEEEe-eEeEEEEcCCCcEEEEEEC-----CCcEEEeCEEEECCCCchhh
Confidence 3445556679999999 89999876543 345443 34589999999999987765
No 329
>2e5v_A L-aspartate oxidase; archaea, oxidoreductase; HET: FAD; 2.09A {Sulfolobus tokodaii}
Probab=97.40 E-value=0.00089 Score=66.62 Aligned_cols=99 Identities=19% Similarity=0.300 Sum_probs=70.4
Q ss_pred eeEEEcccHHHHHHHHHHHHcCCcEEEEEeCCCcCC----------CC--------------------------------
Q 011787 216 KLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIVP----------SM-------------------------------- 253 (477)
Q Consensus 216 ~v~IiG~G~~g~e~a~~l~~~g~~Vtli~~~~~~~~----------~~-------------------------------- 253 (477)
.|+|||+|..|+.+|..+++.|.+|+++++...-.. .+
T Consensus 1 DVvVIG~G~AGl~aA~~la~~G~~V~viek~~~~g~s~~a~Ggi~~~~~~~d~~~~~~~d~l~~g~~~~d~~~v~~~~~~ 80 (472)
T 2e5v_A 1 MIYIIGSGIAGLSAGVALRRAGKKVTLISKRIDGGSTPIAKGGVAASVGSDDSPELHAQDTIRVGDGLCDVKTVNYVTSE 80 (472)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCCEEEECSSTTCSSGGGCCSCEECCCSTTCCHHHHHHHHHHHHTTCSCHHHHHHHHHH
T ss_pred CEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCCchHHHHhCCeEEeCCCCCCHHHHHHHHHHhcCCcCCHHHHHHHHHH
Confidence 489999999999999999999999999987610000 00
Q ss_pred -------------------------------------CHHHHHHHHHHHHhcCcEEEeCceEEEEEEcCCeEE-EEEeec
Q 011787 254 -------------------------------------DGEIRKQFQRSLEKQKMKFMLKTKVVGVDLSGDGVK-LTLEPA 295 (477)
Q Consensus 254 -------------------------------------~~~~~~~~~~~l~~~gv~~~~~~~v~~i~~~~~~~~-v~~~~~ 295 (477)
...+...+.+.+++.|++++.++.+ ++..+++.+. +.+.+
T Consensus 81 ~~~~i~~l~~~Gv~~~~~~~~~~g~~~~r~~~~~d~~g~~l~~~L~~~~~~~gv~i~~~~~v-~l~~~~~~v~Gv~v~~- 158 (472)
T 2e5v_A 81 AKNVIETFESWGFEFEEDLRLEGGHTKRRVLHRTDETGREIFNFLLKLAREEGIPIIEDRLV-EIRVKDGKVTGFVTEK- 158 (472)
T ss_dssp HHHHHHHHHHTTCCCCSSCBCCTTCSSCCEECSSSCHHHHHHHHHHHHHHHTTCCEECCCEE-EEEEETTEEEEEEETT-
T ss_pred HHHHHHHHHHcCCCCCcccccccCcCcCcEEEeCCCCHHHHHHHHHHHHHhCCCEEEECcEE-EEEEeCCEEEEEEEEe-
Confidence 0123344555566779999999999 9977766553 33321
Q ss_pred CCCceEEEEcCEEEEeecCCCCCC
Q 011787 296 AGGEKTILEADVVLVSAGRTPFTA 319 (477)
Q Consensus 296 ~~~~~~~i~~D~vi~a~G~~p~~~ 319 (477)
+..++.+|.||+|+|..+...
T Consensus 159 ---~~g~~~a~~VVlAtGg~~~~~ 179 (472)
T 2e5v_A 159 ---RGLVEDVDKLVLATGGYSYLY 179 (472)
T ss_dssp ---TEEECCCSEEEECCCCCGGGS
T ss_pred ---CCCeEEeeeEEECCCCCcccC
Confidence 223577999999999877543
No 330
>3t37_A Probable dehydrogenase; BET alpha beta fold, ADP binding, oxidoreductase; HET: FAD; 2.19A {Mesorhizobium loti}
Probab=97.38 E-value=8.8e-05 Score=75.15 Aligned_cols=38 Identities=24% Similarity=0.431 Sum_probs=31.9
Q ss_pred CCCCCcEEEECCChHHHHHHHHHHH-CCCeEEEEecCCC
Q 011787 40 ASDENDVVVIGGGPGGYVAAIKAAQ-LGLKTTCIEKRGA 77 (477)
Q Consensus 40 ~~~~~dvvIIGgG~AGl~aA~~l~~-~g~~V~lie~~~~ 77 (477)
....||+||||||+||+.+|.+|.+ .+++|+|+|+...
T Consensus 14 ~~~~yD~IIVGsG~aG~v~A~rLse~~~~~VLvLEaG~~ 52 (526)
T 3t37_A 14 HAPNCDIVIVGGGSAGSLLAARLSEDPDSRVLLIEAGEE 52 (526)
T ss_dssp ---CEEEEEECCSHHHHHHHHHHTTSTTSCEEEECSSBC
T ss_pred CCCCeeEEEECccHHHHHHHHHHHhCCCCeEEEEcCCCC
Confidence 3457999999999999999999998 5789999999643
No 331
>3nrn_A Uncharacterized protein PF1083; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: AMP; 2.10A {Pyrococcus furiosus}
Probab=97.38 E-value=0.0013 Score=64.37 Aligned_cols=47 Identities=21% Similarity=0.340 Sum_probs=37.4
Q ss_pred HHHHhcCcEEEeCceEEEEEEcCCeEEEEEeecCCCceEEEEcCEEEEeecCCC
Q 011787 263 RSLEKQKMKFMLKTKVVGVDLSGDGVKLTLEPAAGGEKTILEADVVLVSAGRTP 316 (477)
Q Consensus 263 ~~l~~~gv~~~~~~~v~~i~~~~~~~~v~~~~~~~~~~~~i~~D~vi~a~G~~p 316 (477)
+.+++.|++++++++|++|..+++++ +. . +++++.+|.||+|+|...
T Consensus 197 ~~~~~~G~~i~~~~~V~~i~~~~~~v-V~-~-----~g~~~~ad~Vv~a~~~~~ 243 (421)
T 3nrn_A 197 RIIMENKGKILTRKEVVEINIEEKKV-YT-R-----DNEEYSFDVAISNVGVRE 243 (421)
T ss_dssp HHHHTTTCEEESSCCEEEEETTTTEE-EE-T-----TCCEEECSEEEECSCHHH
T ss_pred HHHHHCCCEEEcCCeEEEEEEECCEE-EE-e-----CCcEEEeCEEEECCCHHH
Confidence 44566799999999999998877777 42 2 456899999999998653
No 332
>1kf6_A Fumarate reductase flavoprotein; respiration, fumarate reductace, succinate dehydrogenase, CO quinol, quinone, oxidoreductase; HET: FAD HQO CE1 1PE; 2.70A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1kfy_A* 1l0v_A* 2b76_A* 3cir_A* 3p4p_A* 3p4q_A* 3p4r_A* 3p4s_A*
Probab=97.32 E-value=0.0017 Score=66.57 Aligned_cols=99 Identities=14% Similarity=0.200 Sum_probs=70.1
Q ss_pred eeEEEcccHHHHHHHHHHHHcC--CcEEEEEeCCCcCC-----------CC---------------------C-------
Q 011787 216 KLVVIGAGYIGLEMGSVWARLG--SEVTVVEFAADIVP-----------SM---------------------D------- 254 (477)
Q Consensus 216 ~v~IiG~G~~g~e~a~~l~~~g--~~Vtli~~~~~~~~-----------~~---------------------~------- 254 (477)
.|+|||+|..|+-+|..+++.| .+|+++++.+.... .+ +
T Consensus 7 DVvIVG~G~AGl~aAl~la~~G~~~~V~vlEk~~~~~~~s~~a~GGi~~~~~~~ds~~~~~~d~~~~g~~~~d~~~v~~~ 86 (602)
T 1kf6_A 7 DLAIVGAGGAGLRAAIAAAQANPNAKIALISKVYPMRSHTVAAEGGSAAVAQDHDSFEYHFHDTVAGGDWLCEQDVVDYF 86 (602)
T ss_dssp SEEEECCSHHHHHHHHHHHHHCTTCCEEEEESSCGGGSGGGGCCSCEECCCSTTCCHHHHHHHHHHHTTTCSCHHHHHHH
T ss_pred CEEEECCCHHHHHHHHHHHhcCCCCcEEEEeCCCCCCChHHHhcCccEEeCCCCCCHHHHHHHHHHhcCCCCCHHHHHHH
Confidence 6999999999999999999999 99999998642100 00 0
Q ss_pred -----------------------------------------------HHHHHHHHHHHHhcC-cEEEeCceEEEEEEcCC
Q 011787 255 -----------------------------------------------GEIRKQFQRSLEKQK-MKFMLKTKVVGVDLSGD 286 (477)
Q Consensus 255 -----------------------------------------------~~~~~~~~~~l~~~g-v~~~~~~~v~~i~~~~~ 286 (477)
..+...+.+.+++.| ++++.++.++++..+++
T Consensus 87 ~~~~~~~i~~L~~~Gv~f~~~~~g~~~~~~~gg~~~~r~~~~~d~tg~~l~~~L~~~~~~~gnv~i~~~~~v~~l~~~~g 166 (602)
T 1kf6_A 87 VHHCPTEMTQLELWGCPWSRRPDGSVNVRRFGGMKIERTWFAADKTGFHMLHTLFQTSLQFPQIQRFDEHFVLDILVDDG 166 (602)
T ss_dssp HHHHHHHHHHHHHTTCCCCBCTTSSBCCBCCTTCSSCCEECSTTCHHHHHHHHHHHHHTTCTTEEEEETEEEEEEEEETT
T ss_pred HHHHHHHHHHHHHcCCCcccCCCCcccccccCCccCCeEEEcCCCCHHHHHHHHHHHHHhCCCcEEEeCCEEEEEEEeCC
Confidence 122333445555667 99999999999987776
Q ss_pred eEE-EEEeecCCCceEEEEcCEEEEeecC
Q 011787 287 GVK-LTLEPAAGGEKTILEADVVLVSAGR 314 (477)
Q Consensus 287 ~~~-v~~~~~~~~~~~~i~~D~vi~a~G~ 314 (477)
++. +.+.+..++....+.++.||+|+|.
T Consensus 167 ~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg 195 (602)
T 1kf6_A 167 HVRGLVAMNMMEGTLVQIRANAVVMATGG 195 (602)
T ss_dssp EEEEEEEEETTTTEEEEEECSCEEECCCC
T ss_pred EEEEEEEEEcCCCcEEEEEcCeEEECCCC
Confidence 543 3333223333347999999999983
No 333
>1kdg_A CDH, cellobiose dehydrogenase; GMC oxidoreductase, PHBH fold, alpha/beta structure, rossman 6-hydroxylated FAD, oxidoreductase; HET: NAG MAN 6FA EMT; 1.50A {Phanerochaete chrysosporium} SCOP: c.3.1.2 d.16.1.1 PDB: 1naa_A*
Probab=97.29 E-value=0.00017 Score=73.34 Aligned_cols=36 Identities=33% Similarity=0.666 Sum_probs=33.3
Q ss_pred CCCcEEEECCChHHHHHHHHHHHCCCeEEEEecCCC
Q 011787 42 DENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGA 77 (477)
Q Consensus 42 ~~~dvvIIGgG~AGl~aA~~l~~~g~~V~lie~~~~ 77 (477)
..+|+||||+|++|+.+|.+|.+.|.+|+|+|+...
T Consensus 6 ~~~D~iIvG~G~aG~~~A~~L~~~g~~VlvlE~g~~ 41 (546)
T 1kdg_A 6 TPYDYIIVGAGPGGIIAADRLSEAGKKVLLLERGGP 41 (546)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCC
T ss_pred CceeEEEECcCHHHHHHHHHHHhCCCeEEEEeCCCC
Confidence 469999999999999999999999999999999653
No 334
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A*
Probab=97.24 E-value=0.0019 Score=64.70 Aligned_cols=105 Identities=14% Similarity=0.136 Sum_probs=75.2
Q ss_pred eeEEEcccHHHHHHHHHHHHcC--------------CcEEEEEeCCCcC-------CC--------------------C-
Q 011787 216 KLVVIGAGYIGLEMGSVWARLG--------------SEVTVVEFAADIV-------PS--------------------M- 253 (477)
Q Consensus 216 ~v~IiG~G~~g~e~a~~l~~~g--------------~~Vtli~~~~~~~-------~~--------------------~- 253 (477)
.|+|||+|++|+-+|..|.+.| ....++++.+.+. |. +
T Consensus 41 Dvi~IGaGp~gLa~A~~L~~~~~~~~~~~~~~~~~~~~~~f~e~~~~f~Wh~g~~~p~~~~q~~fl~Dlvtl~~P~s~~s 120 (501)
T 4b63_A 41 DLLCVGFGPASLAIAIALHDALDPRLNKSASNIHAQPKICFLERQKQFAWHSGMLVPGSKMQISFIKDLATLRDPRSSFT 120 (501)
T ss_dssp EEEEECCSHHHHHHHHHHHHHHCTTTCTTC----CCCCEEEEESSSSCCSSGGGCCTTCBCSSCGGGSSSTTTCTTCTTS
T ss_pred cEEEEcccHHHHHHHHHHHhcCCCceEEeccccCCCcceeeEeccCCCCcCCCCCCCCccccccchhhhccccCCCCccc
Confidence 5999999999999999887653 2456777665321 10 0
Q ss_pred ---------------------C--HHHHHHHHHHHHhcCcEEEeCceEEEEEEcCC--------eEEEEEeecCCCceEE
Q 011787 254 ---------------------D--GEIRKQFQRSLEKQKMKFMLKTKVVGVDLSGD--------GVKLTLEPAAGGEKTI 302 (477)
Q Consensus 254 ---------------------~--~~~~~~~~~~l~~~gv~~~~~~~v~~i~~~~~--------~~~v~~~~~~~~~~~~ 302 (477)
+ .++.++++...++.+..+.++++|++++..+. ...++..+..++...+
T Consensus 121 f~~yl~~~~rl~~f~~~~~~~p~r~E~~~Yl~~~A~~~~~~vrf~~~V~~v~~~~~~~~~~~~~~~~V~~~~~~~g~~~~ 200 (501)
T 4b63_A 121 FLNYLHQKGRLIHFTNLSTFLPARLEFEDYMRWCAQQFSDVVAYGEEVVEVIPGKSDPSSSVVDFFTVRSRNVETGEISA 200 (501)
T ss_dssp HHHHHHHHTCHHHHHTTCCSCCBHHHHHHHHHHHHHTTGGGEEESEEEEEEEEECSSTTSSCBCEEEEEEEETTTCCEEE
T ss_pred hHHHHHHhCCccCCccccCCCCCHHHHHHHHHHHHHHcCCceEcceEEEeeccccccccccccceEEEEEecCCCceEEE
Confidence 0 23445555555555667889999999976432 3667777777778889
Q ss_pred EEcCEEEEeecCCCCCCC
Q 011787 303 LEADVVLVSAGRTPFTAG 320 (477)
Q Consensus 303 i~~D~vi~a~G~~p~~~~ 320 (477)
+.++.||+|+|..|+...
T Consensus 201 ~~ar~vVlatG~~P~iP~ 218 (501)
T 4b63_A 201 RRTRKVVIAIGGTAKMPS 218 (501)
T ss_dssp EEEEEEEECCCCEECCCT
T ss_pred EEeCEEEECcCCCCCCCC
Confidence 999999999999888764
No 335
>3ayj_A Pro-enzyme of L-phenylalanine oxidase; amino acid oxidase, flavoenzyme, L- binding, oxidoreductase; HET: FAD PHE; 1.10A {Pseudomonas} PDB: 2yr4_A* 2yr6_A* 3ayi_A* 2yr5_A* 3ayl_A*
Probab=97.22 E-value=0.00011 Score=75.99 Aligned_cols=36 Identities=22% Similarity=0.503 Sum_probs=33.9
Q ss_pred CCcEEEECCChHHHHHHHHHHHCC--------CeEEEEecCC-CC
Q 011787 43 ENDVVVIGGGPGGYVAAIKAAQLG--------LKTTCIEKRG-AL 78 (477)
Q Consensus 43 ~~dvvIIGgG~AGl~aA~~l~~~g--------~~V~lie~~~-~~ 78 (477)
.++|+|||||++|++||..|.+.| ++|+|+|+++ .+
T Consensus 56 ~~~v~IiGaGiaGL~aA~~L~~~g~~~~~~~~~~V~v~E~~~~r~ 100 (721)
T 3ayj_A 56 NYRIAIVGGGAGGIAALYELGRLAATLPAGSGIDVQIYEADPDSF 100 (721)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHHTTSCTTCEEEEEEECCCTTBG
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCcccccCCCceEEEEeccCccc
Confidence 478999999999999999999988 9999999988 88
No 336
>1vg0_A RAB proteins geranylgeranyltransferase component A 1; RAB prenylation, post-translational modification, protein binding/protein transport complex; HET: GER GDP PG4; 2.20A {Rattus norvegicus} SCOP: c.3.1.3 d.16.1.6 PDB: 1vg9_A* 1ltx_R*
Probab=97.19 E-value=0.00035 Score=71.30 Aligned_cols=44 Identities=25% Similarity=0.421 Sum_probs=40.4
Q ss_pred CCCCcEEEECCChHHHHHHHHHHHCCCeEEEEecCCCCCceeec
Q 011787 41 SDENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGALGGTCLN 84 (477)
Q Consensus 41 ~~~~dvvIIGgG~AGl~aA~~l~~~g~~V~lie~~~~~GG~~~~ 84 (477)
..+||++|||+|..|...|..|++.|.+|++|||++..||.|..
T Consensus 6 ~~~~D~~i~GtGl~~~~~a~~~~~~g~~vl~id~~~~~gg~~~~ 49 (650)
T 1vg0_A 6 PSDFDVIVIGTGLPESIIAAACSRSGQRVLHVDSRSYYGGNWAS 49 (650)
T ss_dssp CSBCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCGGGCE
T ss_pred CCcCCEEEECCcHHHHHHHHHHHhCCCEEEEEcCCCcccCcccc
Confidence 34699999999999999999999999999999999999997643
No 337
>1ju2_A HydroxynitrIle lyase; flavin, GMC oxidoreductase, almond, cyanogenesis; HET: NAG NDG FUC BMA MAN FAD; 1.47A {Prunus dulcis} SCOP: c.3.1.2 d.16.1.1 PDB: 3gdp_A* 3gdn_A*
Probab=97.17 E-value=0.00014 Score=73.64 Aligned_cols=35 Identities=26% Similarity=0.448 Sum_probs=32.1
Q ss_pred CCCcEEEECCChHHHHHHHHHHHCCCeEEEEecCCC
Q 011787 42 DENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGA 77 (477)
Q Consensus 42 ~~~dvvIIGgG~AGl~aA~~l~~~g~~V~lie~~~~ 77 (477)
..||+||||||+||+.+|.+|.+ |.+|+|+|+...
T Consensus 25 ~~yD~IIVGsG~AG~v~A~rLse-g~~VlvLEaG~~ 59 (536)
T 1ju2_A 25 GSYDYVIVGGGTSGCPLAATLSE-KYKVLVLERGSL 59 (536)
T ss_dssp EEEEEEEECCSTTHHHHHHHHTT-TSCEEEECSSBC
T ss_pred CcccEEEECccHHHHHHHHHHhc-CCcEEEEecCCC
Confidence 45999999999999999999999 999999999543
No 338
>3q9t_A Choline dehydrogenase and related flavoproteins; glucose-methanol-choline oxidoreductase family, formate OXID formyl-FAD, oxidoreductase; HET: FAY; 2.24A {Aspergillus oryzae}
Probab=97.12 E-value=0.00028 Score=71.87 Aligned_cols=36 Identities=25% Similarity=0.350 Sum_probs=32.5
Q ss_pred CCCcEEEECCChHHHHHHHHHHHCC-CeEEEEecCCC
Q 011787 42 DENDVVVIGGGPGGYVAAIKAAQLG-LKTTCIEKRGA 77 (477)
Q Consensus 42 ~~~dvvIIGgG~AGl~aA~~l~~~g-~~V~lie~~~~ 77 (477)
..||+||||||.||+.+|.+|.+.+ .+|+|||+...
T Consensus 5 ~~yDyIVVGgG~AG~v~A~rLse~~~~~VLllEaG~~ 41 (577)
T 3q9t_A 5 SHFDFVIVGGGTAGNTVAGRLAENPNVTVLIVEAGIG 41 (577)
T ss_dssp CEEEEEEESCSHHHHHHHHHHTTSTTSCEEEECSSCS
T ss_pred CcccEEEECCcHHHHHHHHHHHhCCCCcEEEEecCCC
Confidence 4599999999999999999999987 79999999654
No 339
>2weu_A Tryptophan 5-halogenase; regioselectivity, antifungal protei; HET: TRP; 1.70A {Streptomyces rugosporus} PDB: 2wet_A* 2wes_A*
Probab=97.07 E-value=0.0044 Score=62.28 Aligned_cols=52 Identities=10% Similarity=0.153 Sum_probs=38.0
Q ss_pred HHHHHHhcCcEEEeCceEEEEEEcCCe--EEEEEeecCCCceEEEEcCEEEEeecCCCCC
Q 011787 261 FQRSLEKQKMKFMLKTKVVGVDLSGDG--VKLTLEPAAGGEKTILEADVVLVSAGRTPFT 318 (477)
Q Consensus 261 ~~~~l~~~gv~~~~~~~v~~i~~~~~~--~~v~~~~~~~~~~~~i~~D~vi~a~G~~p~~ 318 (477)
+.+.+++.|++++.+ +|+++..++++ +.+++. +++++.+|.||.|+|.....
T Consensus 179 L~~~a~~~gv~~~~~-~v~~i~~~~~~~~~~v~~~-----~g~~~~ad~vV~A~G~~S~~ 232 (511)
T 2weu_A 179 LSEYAIARGVRHVVD-DVQHVGQDERGWISGVHTK-----QHGEISGDLFVDCTGFRGLL 232 (511)
T ss_dssp HHHHHHHTTCEEEEC-CEEEEEECTTSCEEEEEES-----SSCEEECSEEEECCGGGCCC
T ss_pred HHHHHHHCCCEEEEC-eEeEEEEcCCCCEEEEEEC-----CCCEEEcCEEEECCCcchHH
Confidence 344555679999999 89999875544 345543 34589999999999987654
No 340
>4gde_A UDP-galactopyranose mutase; flavin adenine dinucleotide binding, nucleotide binding, MUT isomerase; HET: FDA; 2.20A {Aspergillus fumigatus} PDB: 3ute_A* 3utg_A* 3uth_A* 4gdc_A* 4gdd_A* 3utf_A* 3ukh_A* 3ukf_A* 3uka_A* 3ukl_A* 3ukk_A* 3ukq_A* 3ukp_A*
Probab=97.07 E-value=0.00088 Score=67.42 Aligned_cols=35 Identities=26% Similarity=0.384 Sum_probs=31.5
Q ss_pred CeeEEEcccHHHHHHHHHHHHc-CCcEEEEEeCCCc
Q 011787 215 KKLVVIGAGYIGLEMGSVWARL-GSEVTVVEFAADI 249 (477)
Q Consensus 215 ~~v~IiG~G~~g~e~a~~l~~~-g~~Vtli~~~~~~ 249 (477)
-.|+|||||.+|+-+|..|++. |.+|+++++++++
T Consensus 11 ~DVvIIGaGisGLsaA~~L~k~~G~~V~VlE~~~~~ 46 (513)
T 4gde_A 11 VDVLVIGAGPTGLGAAKRLNQIDGPSWMIVDSNETP 46 (513)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHCCSCEEEEESSSSC
T ss_pred CCEEEECCcHHHHHHHHHHHhhCCCCEEEEECCCCC
Confidence 4699999999999999999874 9999999988875
No 341
>1n4w_A CHOD, cholesterol oxidase; flavoenzyme, steroid metabolism, oxidoreductase, atomic RESO; HET: FAD; 0.92A {Streptomyces SP} SCOP: c.3.1.2 d.16.1.1 PDB: 1b4v_A* 1n1p_A* 1n4u_A* 1n4v_A* 1mxt_A* 2gew_A* 1b8s_A* 3gyi_A* 1cc2_A* 3gyj_A* 1ijh_A* 1cbo_A* 3b3r_A* 3b6d_A* 3cnj_A*
Probab=97.02 E-value=0.0005 Score=69.10 Aligned_cols=38 Identities=29% Similarity=0.380 Sum_probs=34.1
Q ss_pred CCCcEEEECCChHHHHHHHHHHHCCCeEEEEecCCCCC
Q 011787 42 DENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGALG 79 (477)
Q Consensus 42 ~~~dvvIIGgG~AGl~aA~~l~~~g~~V~lie~~~~~G 79 (477)
..+|++|||+|++|+.+|.+|.+.|.+|+|+|+....+
T Consensus 4 ~~~d~~iiG~G~~g~~~a~~l~~~~~~v~~~e~~~~~~ 41 (504)
T 1n4w_A 4 GYVPAVVIGTGYGAAVSALRLGEAGVQTLMLEMGQLWN 41 (504)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSCCCC
T ss_pred CcCCEEEECCCHHHHHHHHHHHhCCCcEEEEeCCCCCC
Confidence 35899999999999999999999999999999976443
No 342
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=97.02 E-value=0.0017 Score=68.26 Aligned_cols=34 Identities=21% Similarity=0.048 Sum_probs=31.1
Q ss_pred CCcEEEEC--CChHHHHHHHHHHHCCCeEEEEecCC
Q 011787 43 ENDVVVIG--GGPGGYVAAIKAAQLGLKTTCIEKRG 76 (477)
Q Consensus 43 ~~dvvIIG--gG~AGl~aA~~l~~~g~~V~lie~~~ 76 (477)
..+|+||| ||..|+-+|..|++.|.+|+|+++.+
T Consensus 528 gk~VvVIG~GgG~~g~e~A~~l~~~G~~Vtlv~~~~ 563 (729)
T 1o94_A 528 GKRVVILNADTYFMAPSLAEKLATAGHEVTIVSGVH 563 (729)
T ss_dssp CSEEEEEECCCSSHHHHHHHHHHHTTCEEEEEESSC
T ss_pred CCeEEEEcCCCCchHHHHHHHHHHcCCEEEEEeccc
Confidence 46899999 99999999999999999999999854
No 343
>2h88_A Succinate dehydrogenase flavoprotein subunit; complex II, membrane protein, heme protein, iron sulfur PROT cytochrome B, oxidoreductase; HET: FAD BHG HEM UNL; 1.74A {Gallus gallus} PDB: 1yq4_A* 1yq3_A* 2fbw_A* 2h89_A* 2wqy_A* 1zoy_A* 1zp0_A* 3abv_A* 3ae1_A* 3ae2_A* 3ae3_A* 3ae4_A* 3ae5_A* 3ae6_A* 3ae7_A* 3ae8_A* 3ae9_A* 3aea_A* 3aeb_A* 3aec_A* ...
Probab=96.97 E-value=0.0069 Score=62.16 Aligned_cols=52 Identities=6% Similarity=0.084 Sum_probs=37.3
Q ss_pred HHhcCcEEEeCceEEEEEEcCCeEE-EEEeecCCCceEEEEcCEEEEeecCCC
Q 011787 265 LEKQKMKFMLKTKVVGVDLSGDGVK-LTLEPAAGGEKTILEADVVLVSAGRTP 316 (477)
Q Consensus 265 l~~~gv~~~~~~~v~~i~~~~~~~~-v~~~~~~~~~~~~i~~D~vi~a~G~~p 316 (477)
+++.|++++.++.++++..+++++. +.+.+..++....+.++.||+|+|-..
T Consensus 165 ~~~~gv~i~~~~~v~~Li~~~g~v~Gv~~~~~~~G~~~~i~A~~VVlATGG~~ 217 (621)
T 2h88_A 165 SLRYDTSYFVEYFALDLLMENGECRGVIALCIEDGTIHRFRAKNTVIATGGYG 217 (621)
T ss_dssp HTTSCCEEEETEEEEEEEEETTEEEEEEEEETTTCCEEEEEEEEEEECCCCCG
T ss_pred HHhCCCEEEEceEEEEEEEECCEEEEEEEEEcCCCcEEEEEcCeEEECCCccc
Confidence 3456899999999999987666554 444332344445799999999999543
No 344
>3c4a_A Probable tryptophan hydroxylase VIOD; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.30A {Chromobacterium violaceum atcc 12472}
Probab=96.97 E-value=0.00044 Score=66.85 Aligned_cols=86 Identities=17% Similarity=0.227 Sum_probs=64.9
Q ss_pred eeEEEcccHHHHHHHHHHHHc--CCcEEEEEeCCCcC-----------------------CC-C----------------
Q 011787 216 KLVVIGAGYIGLEMGSVWARL--GSEVTVVEFAADIV-----------------------PS-M---------------- 253 (477)
Q Consensus 216 ~v~IiG~G~~g~e~a~~l~~~--g~~Vtli~~~~~~~-----------------------~~-~---------------- 253 (477)
+|+|||||+.|+.+|..|++. |.+|+++++.+.+. .. +
T Consensus 2 dV~IVGaG~aGl~~A~~L~~~~~G~~V~v~E~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 81 (381)
T 3c4a_A 2 KILVIGAGPAGLVFASQLKQARPLWAIDIVEKNDEQEVLGWGVVLPGRPGQHPANPLSYLDAPERLNPQFLEDFKLVHHN 81 (381)
T ss_dssp EEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSCTTCCCCSEEEEESCTTTCTTCGGGGSSCGGGGCCEEECCEEEEESS
T ss_pred eEEEECCCHHHHHHHHHHHhcCCCCCEEEEECCCCCCcceeEEEeCcHHHHhhcCcchhhhhhHHHhhccccceEEEeCC
Confidence 699999999999999999999 99999999876440 00 0
Q ss_pred ---------------CHHHHHHHHHHHHhcCcEEEeCceEEEEEEcCCeEEEEEeecCCCceEEEEcCEEEEeecCCCC
Q 011787 254 ---------------DGEIRKQFQRSLEKQKMKFMLKTKVVGVDLSGDGVKLTLEPAAGGEKTILEADVVLVSAGRTPF 317 (477)
Q Consensus 254 ---------------~~~~~~~~~~~l~~~gv~~~~~~~v~~i~~~~~~~~v~~~~~~~~~~~~i~~D~vi~a~G~~p~ 317 (477)
..++.+.+.+.+++.|++++++++|++++.. ..+.+|.||.|.|..+.
T Consensus 82 ~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~gv~i~~~~~v~~i~~~----------------~~~~ad~vV~AdG~~S~ 144 (381)
T 3c4a_A 82 EPSLMSTGVLLCGVERRGLVHALRDKCRSQGIAIRFESPLLEHGEL----------------PLADYDLVVLANGVNHK 144 (381)
T ss_dssp SEEECCCCSCEEEEEHHHHHHHHHHHHHHTTCEEETTCCCCSGGGC----------------CGGGCSEEEECCGGGGG
T ss_pred eeEEecCCCceeeecHHHHHHHHHHHHHHCCCEEEeCCEeccchhc----------------ccccCCEEEECCCCCch
Confidence 0245566667777778888888888776321 12468999999998775
No 345
>2pyx_A Tryptophan halogenase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative biosynthetic protein; HET: MSE TLA PG4; 1.50A {Shewanella frigidimarina}
Probab=96.94 E-value=0.0086 Score=60.39 Aligned_cols=51 Identities=10% Similarity=0.142 Sum_probs=36.7
Q ss_pred HHHHHh-cCcEEEeCceEEEEEEcCCeE--EEEEeecCCCceEEEEcCEEEEeecCCCCC
Q 011787 262 QRSLEK-QKMKFMLKTKVVGVDLSGDGV--KLTLEPAAGGEKTILEADVVLVSAGRTPFT 318 (477)
Q Consensus 262 ~~~l~~-~gv~~~~~~~v~~i~~~~~~~--~v~~~~~~~~~~~~i~~D~vi~a~G~~p~~ 318 (477)
.+.+++ .|++++.+ +|++++.++++. .+++. ++.++.+|.||.|+|..+..
T Consensus 182 ~~~a~~~~Gv~i~~~-~v~~i~~~~~g~~~~v~~~-----~g~~i~ad~vV~AdG~~S~~ 235 (526)
T 2pyx_A 182 TEHCTQKLGVTHIRD-HVSQIINNQHGDIEKLITK-----QNGEISGQLFIDCTGAKSLL 235 (526)
T ss_dssp HHHHHHTSCCEEEEC-CEEEEEECTTSCEEEEEES-----SSCEEECSEEEECSGGGCCC
T ss_pred HHHHHhcCCCEEEEe-EEEEEEecCCCcEEEEEEC-----CCCEEEcCEEEECCCcchHH
Confidence 344455 79999999 699998765443 34443 33469999999999997765
No 346
>3qvp_A Glucose oxidase; oxidoreductase; HET: NAG BMA MAN FAD; 1.20A {Aspergillus niger} PDB: 1gal_A* 1cf3_A* 3qvr_A*
Probab=96.93 E-value=0.00048 Score=70.10 Aligned_cols=35 Identities=23% Similarity=0.396 Sum_probs=32.0
Q ss_pred CCCcEEEECCChHHHHHHHHHHHC-CCeEEEEecCC
Q 011787 42 DENDVVVIGGGPGGYVAAIKAAQL-GLKTTCIEKRG 76 (477)
Q Consensus 42 ~~~dvvIIGgG~AGl~aA~~l~~~-g~~V~lie~~~ 76 (477)
..||+||||||.||+.+|.+|.+. +.+|+|+|+..
T Consensus 18 ~~yDyIIVGgG~AG~vlA~RLse~~~~~VLlLEaG~ 53 (583)
T 3qvp_A 18 RTVDYIIAGGGLTGLTTAARLTENPNISVLVIESGS 53 (583)
T ss_dssp CEEEEEEECCSHHHHHHHHHHTTSTTCCEEEECSSC
T ss_pred CCccEEEECCcHHHHHHHHHHHhCCCCcEEEEecCC
Confidence 459999999999999999999975 79999999965
No 347
>1coy_A Cholesterol oxidase; oxidoreductase(oxygen receptor); HET: AND FAD; 1.80A {Brevibacterium sterolicum} SCOP: c.3.1.2 d.16.1.1 PDB: 3cox_A*
Probab=96.93 E-value=0.00067 Score=68.19 Aligned_cols=37 Identities=38% Similarity=0.565 Sum_probs=33.6
Q ss_pred CCCCcEEEECCChHHHHHHHHHHHCCCeEEEEecCCC
Q 011787 41 SDENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGA 77 (477)
Q Consensus 41 ~~~~dvvIIGgG~AGl~aA~~l~~~g~~V~lie~~~~ 77 (477)
..++|++|||+|++|+.+|.+|.+.|.+|+|+|+...
T Consensus 9 ~~~~d~~iiG~G~~g~~~a~~l~~~~~~v~~~e~~~~ 45 (507)
T 1coy_A 9 GDRVPALVIGSGYGGAVAALRLTQAGIPTQIVEMGRS 45 (507)
T ss_dssp TCEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCC
T ss_pred CCcCCEEEECCCHHHHHHHHHHHHCCCcEEEEECCCC
Confidence 4569999999999999999999999999999999643
No 348
>1chu_A Protein (L-aspartate oxidase); flavoenzyme, NAD biosynthesis, FAD, oxidoreductase; 2.20A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1knr_A* 1knp_A*
Probab=96.85 E-value=0.0039 Score=63.05 Aligned_cols=33 Identities=24% Similarity=0.349 Sum_probs=29.8
Q ss_pred CeeEEEcccHHHHHHHHHHHHcCCcEEEEEeCCC
Q 011787 215 KKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAAD 248 (477)
Q Consensus 215 ~~v~IiG~G~~g~e~a~~l~~~g~~Vtli~~~~~ 248 (477)
-.|+|||+|..|+-+|..+++ |.+|+++++.+.
T Consensus 9 ~DVvVVG~G~AGl~aAl~la~-G~~V~vlEk~~~ 41 (540)
T 1chu_A 9 CDVLIIGSGAAGLSLALRLAD-QHQVIVLSKGPV 41 (540)
T ss_dssp CSEEEECCSHHHHHHHHHHTT-TSCEEEECSSCT
T ss_pred CCEEEECccHHHHHHHHHHhc-CCcEEEEECCCC
Confidence 369999999999999999999 999999998764
No 349
>3fim_B ARYL-alcohol oxidase; AAO, lignin degradation, oxidoreductase, flavoprotein; HET: FAD; 2.55A {Pleurotus eryngii}
Probab=96.75 E-value=0.00059 Score=69.26 Aligned_cols=36 Identities=25% Similarity=0.351 Sum_probs=32.5
Q ss_pred CCcEEEECCChHHHHHHHHHHH-CCCeEEEEecCCCC
Q 011787 43 ENDVVVIGGGPGGYVAAIKAAQ-LGLKTTCIEKRGAL 78 (477)
Q Consensus 43 ~~dvvIIGgG~AGl~aA~~l~~-~g~~V~lie~~~~~ 78 (477)
.||+||||||.||+.+|.+|.+ .+.+|+|+|+....
T Consensus 2 ~yD~IIVG~G~aG~v~A~rLse~~~~~VlllEaG~~~ 38 (566)
T 3fim_B 2 DFDYVVVGAGNAGNVVAARLTEDPDVSVLVLEAGVSD 38 (566)
T ss_dssp CEEEEESCCSTTHHHHHHHHTTSTTCCEEEECSSBCC
T ss_pred CcCEEEECCcHHHHHHHHHHHhCcCCcEEEEecCCcc
Confidence 4899999999999999999998 58999999996544
No 350
>2bs2_A Quinol-fumarate reductase flavoprotein subunit A; 2Fe-2S, 3Fe-4S, 4Fe-4S, citric acid cycle, dihaem cytochrome B; HET: FAD HEM LMT; 1.78A {Wolinella succinogenes} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 2bs3_A* 1e7p_A* 2bs4_A* 1qlb_A*
Probab=96.75 E-value=0.015 Score=60.02 Aligned_cols=52 Identities=10% Similarity=0.075 Sum_probs=36.9
Q ss_pred HHHHhcCcEEEeCceEEEEEEcCCeEE-EEEeecCCCceEEEEcCEEEEeecC
Q 011787 263 RSLEKQKMKFMLKTKVVGVDLSGDGVK-LTLEPAAGGEKTILEADVVLVSAGR 314 (477)
Q Consensus 263 ~~l~~~gv~~~~~~~v~~i~~~~~~~~-v~~~~~~~~~~~~i~~D~vi~a~G~ 314 (477)
+.+++.|++++.++.++++..+++++. +.+.+..++....+.++.||+|+|-
T Consensus 166 ~~a~~~gv~i~~~~~v~~L~~~~g~v~Gv~~~~~~~G~~~~i~A~~VVlATGG 218 (660)
T 2bs2_A 166 NECLKLGVSIQDRKEAIALIHQDGKCYGAVVRDLVTGDIIAYVAKGTLIATGG 218 (660)
T ss_dssp HHHHHHTCEEECSEEEEEEEEETTEEEEEEEEETTTCCEEEEECSEEEECCCC
T ss_pred HHHHhCCCEEEECcEEEEEEecCCEEEEEEEEECCCCcEEEEEcCEEEEccCc
Confidence 344556899999999999987666543 4443323444457999999999984
No 351
>1gpe_A Protein (glucose oxidase); oxidoreductase(flavoprotein); HET: NAG BMA MAN FAD; 1.80A {Penicillium amagasakiense} SCOP: c.3.1.2 d.16.1.1
Probab=96.74 E-value=0.0011 Score=67.85 Aligned_cols=37 Identities=30% Similarity=0.372 Sum_probs=33.3
Q ss_pred CCCCcEEEECCChHHHHHHHHHHH-CCCeEEEEecCCC
Q 011787 41 SDENDVVVIGGGPGGYVAAIKAAQ-LGLKTTCIEKRGA 77 (477)
Q Consensus 41 ~~~~dvvIIGgG~AGl~aA~~l~~-~g~~V~lie~~~~ 77 (477)
+..+|++|||+|++|+.+|.+|.+ .+.+|+|+|+...
T Consensus 22 ~~~~d~iivG~G~~g~~~a~~l~~~~~~~v~~~e~g~~ 59 (587)
T 1gpe_A 22 GKTYDYIIAGGGLTGLTVAAKLTENPKIKVLVIEKGFY 59 (587)
T ss_dssp TCEEEEEEECCSHHHHHHHHHHHTSTTCCEEEEESSCC
T ss_pred cccCCEEEECcCHHHHHHHHHHHhCCCCcEEEEecCCc
Confidence 346999999999999999999999 7999999999654
No 352
>2jbv_A Choline oxidase; alcohol oxidation, flavoenyzme oxidase, covalently linked FAD, C4A-adduct, flavoprotein, oxidoreductase; HET: FAO; 1.86A {Arthrobacter globiformis} PDB: 3nne_A* 3ljp_A*
Probab=96.67 E-value=0.0011 Score=67.21 Aligned_cols=37 Identities=24% Similarity=0.375 Sum_probs=33.4
Q ss_pred CCCcEEEECCChHHHHHHHHHHHC-CCeEEEEecCCCC
Q 011787 42 DENDVVVIGGGPGGYVAAIKAAQL-GLKTTCIEKRGAL 78 (477)
Q Consensus 42 ~~~dvvIIGgG~AGl~aA~~l~~~-g~~V~lie~~~~~ 78 (477)
..+|++|||+|++|+.+|.+|.+. +.+|+|+|+....
T Consensus 12 ~~~d~~ivG~G~~G~~~a~~l~~~~~~~v~~~e~g~~~ 49 (546)
T 2jbv_A 12 REFDYIVVGGGSAGAAVAARLSEDPAVSVALVEAGPDD 49 (546)
T ss_dssp CEEEEEEECCSHHHHHHHHHHTTSTTSCEEEECSSCCC
T ss_pred CcCCEEEECcCHHHHHHHHHHHhCCCCCEEEEecCCcC
Confidence 458999999999999999999998 8999999996543
No 353
>3i6d_A Protoporphyrinogen oxidase; protein-inhibitor complex, cytoplasm, FAD, flavoprotein, oxidoreductase, porphyrin biosynthesis; HET: FAD ACJ; 2.90A {Bacillus subtilis}
Probab=96.67 E-value=0.0068 Score=60.04 Aligned_cols=40 Identities=35% Similarity=0.410 Sum_probs=33.6
Q ss_pred cEEEeCceEEEEEEcCCeEEEEEeecCCCceEEEEcCEEEEeecC
Q 011787 270 MKFMLKTKVVGVDLSGDGVKLTLEPAAGGEKTILEADVVLVSAGR 314 (477)
Q Consensus 270 v~~~~~~~v~~i~~~~~~~~v~~~~~~~~~~~~i~~D~vi~a~G~ 314 (477)
++++++++|++|+.+++++.+++. +++++.+|.||+|++.
T Consensus 248 ~~i~~~~~V~~i~~~~~~~~v~~~-----~g~~~~ad~vi~a~p~ 287 (470)
T 3i6d_A 248 TKVYKGTKVTKLSHSGSCYSLELD-----NGVTLDADSVIVTAPH 287 (470)
T ss_dssp EEEECSCCEEEEEECSSSEEEEES-----SSCEEEESEEEECSCH
T ss_pred CEEEeCCceEEEEEcCCeEEEEEC-----CCCEEECCEEEECCCH
Confidence 489999999999988888777764 5567999999999873
No 354
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=96.25 E-value=0.0034 Score=56.94 Aligned_cols=34 Identities=21% Similarity=0.413 Sum_probs=31.7
Q ss_pred eeEEEcccHHHHHHHHHHHHcCCcEEEEEeCCCc
Q 011787 216 KLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADI 249 (477)
Q Consensus 216 ~v~IiG~G~~g~e~a~~l~~~g~~Vtli~~~~~~ 249 (477)
.|+|||+|++|+.+|..|++.|.+|+++++.+.+
T Consensus 4 dV~IIGaGpaGL~aA~~La~~G~~V~v~Ek~~~~ 37 (336)
T 3kkj_A 4 PIAIIGTGIAGLSAAQALTAAGHQVHLFDKSRGS 37 (336)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSS
T ss_pred CEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCC
Confidence 5999999999999999999999999999988754
No 355
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=96.08 E-value=0.0072 Score=49.92 Aligned_cols=36 Identities=22% Similarity=0.315 Sum_probs=31.9
Q ss_pred CCCCCcEEEECCChHHHHHHHHHHHCCCeEEEEecC
Q 011787 40 ASDENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKR 75 (477)
Q Consensus 40 ~~~~~dvvIIGgG~AGl~aA~~l~~~g~~V~lie~~ 75 (477)
.....+|+|||+|..|...|..|.+.|.+|+++|++
T Consensus 16 ~~~~~~v~IiG~G~iG~~la~~L~~~g~~V~vid~~ 51 (155)
T 2g1u_A 16 KQKSKYIVIFGCGRLGSLIANLASSSGHSVVVVDKN 51 (155)
T ss_dssp -CCCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred ccCCCcEEEECCCHHHHHHHHHHHhCCCeEEEEECC
Confidence 344578999999999999999999999999999984
No 356
>3gyx_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 3.20A {Desulfovibrio gigas}
Probab=96.04 E-value=0.018 Score=59.48 Aligned_cols=33 Identities=18% Similarity=0.238 Sum_probs=29.4
Q ss_pred CeeEEEcccHHHHHHHHHHHHc------CCcEEEEEeCC
Q 011787 215 KKLVVIGAGYIGLEMGSVWARL------GSEVTVVEFAA 247 (477)
Q Consensus 215 ~~v~IiG~G~~g~e~a~~l~~~------g~~Vtli~~~~ 247 (477)
-.|+|||+|..|+-+|..+++. |.+|.++++..
T Consensus 23 ~DVvVVG~G~AGL~AAl~aa~~~~~~~pG~~V~vleK~~ 61 (662)
T 3gyx_A 23 VDLLMVGGGMGNCGAAFEAVRWADKYAPEAKILLVDKAS 61 (662)
T ss_dssp CSEEEECCSHHHHHHHHHHHHHHHHHCTTCCEEEECSSC
T ss_pred cCEEEECCCHHHHHHHHHHHhhccccCCCCcEEEEEecC
Confidence 3699999999999999999987 99999998753
No 357
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=95.77 E-value=0.016 Score=46.89 Aligned_cols=33 Identities=21% Similarity=0.235 Sum_probs=30.8
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCeEEEEecC
Q 011787 43 ENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKR 75 (477)
Q Consensus 43 ~~dvvIIGgG~AGl~aA~~l~~~g~~V~lie~~ 75 (477)
+.+++|||.|..|...|..|.+.|++|+++|++
T Consensus 7 ~~~viIiG~G~~G~~la~~L~~~g~~v~vid~~ 39 (140)
T 3fwz_A 7 CNHALLVGYGRVGSLLGEKLLASDIPLVVIETS 39 (140)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHTTCCEEEEESC
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCCEEEEECC
Confidence 457999999999999999999999999999983
No 358
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=95.65 E-value=0.0075 Score=60.36 Aligned_cols=35 Identities=31% Similarity=0.385 Sum_probs=31.0
Q ss_pred CeeEEEcccHHHHHHHHHHHHcCCcEEEEEeCCCc
Q 011787 215 KKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADI 249 (477)
Q Consensus 215 ~~v~IiG~G~~g~e~a~~l~~~g~~Vtli~~~~~~ 249 (477)
|+|+|||+|..|+-+|..|++.|.+|+++++++++
T Consensus 2 k~VvVIGaG~~GL~aA~~La~~G~~V~VlEa~~~~ 36 (501)
T 4dgk_A 2 KPTTVIGAGFGGLALAIRLQAAGIPVLLLEQRDKP 36 (501)
T ss_dssp CCEEEECCHHHHHHHHHHHHHTTCCEEEECCC---
T ss_pred CCEEEECCcHHHHHHHHHHHHCCCcEEEEccCCCC
Confidence 67999999999999999999999999999998876
No 359
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=95.47 E-value=0.017 Score=46.43 Aligned_cols=31 Identities=23% Similarity=0.311 Sum_probs=29.6
Q ss_pred CcEEEECCChHHHHHHHHHHHCCCeEEEEec
Q 011787 44 NDVVVIGGGPGGYVAAIKAAQLGLKTTCIEK 74 (477)
Q Consensus 44 ~dvvIIGgG~AGl~aA~~l~~~g~~V~lie~ 74 (477)
++++|||+|..|...|..|.+.|.+|+++|+
T Consensus 5 m~i~IiG~G~iG~~~a~~L~~~g~~v~~~d~ 35 (140)
T 1lss_A 5 MYIIIAGIGRVGYTLAKSLSEKGHDIVLIDI 35 (140)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEES
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEEEEEC
Confidence 5799999999999999999999999999998
No 360
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=95.35 E-value=0.021 Score=46.16 Aligned_cols=33 Identities=21% Similarity=0.322 Sum_probs=30.6
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCeEEEEecC
Q 011787 43 ENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKR 75 (477)
Q Consensus 43 ~~dvvIIGgG~AGl~aA~~l~~~g~~V~lie~~ 75 (477)
+.+++|+|+|.-|...|..|.+.|++|+++|++
T Consensus 6 ~~~v~I~G~G~iG~~la~~L~~~g~~V~~id~~ 38 (141)
T 3llv_A 6 RYEYIVIGSEAAGVGLVRELTAAGKKVLAVDKS 38 (141)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEESC
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCeEEEEECC
Confidence 357999999999999999999999999999983
No 361
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=95.32 E-value=0.022 Score=46.73 Aligned_cols=33 Identities=18% Similarity=0.201 Sum_probs=30.6
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCeEEEEecC
Q 011787 43 ENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKR 75 (477)
Q Consensus 43 ~~dvvIIGgG~AGl~aA~~l~~~g~~V~lie~~ 75 (477)
+.+++|+|+|..|...|..|.+.|++|+++|++
T Consensus 3 ~~~vlI~G~G~vG~~la~~L~~~g~~V~vid~~ 35 (153)
T 1id1_A 3 KDHFIVCGHSILAINTILQLNQRGQNVTVISNL 35 (153)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHTTCCEEEEECC
T ss_pred CCcEEEECCCHHHHHHHHHHHHCCCCEEEEECC
Confidence 457999999999999999999999999999983
No 362
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=95.28 E-value=0.02 Score=44.34 Aligned_cols=32 Identities=19% Similarity=0.254 Sum_probs=29.9
Q ss_pred CCcEEEECCChHHHHHHHHHHHCC-CeEEEEec
Q 011787 43 ENDVVVIGGGPGGYVAAIKAAQLG-LKTTCIEK 74 (477)
Q Consensus 43 ~~dvvIIGgG~AGl~aA~~l~~~g-~~V~lie~ 74 (477)
+.+++|+|+|..|...+..|.+.| ++|+++++
T Consensus 5 ~~~v~I~G~G~iG~~~~~~l~~~g~~~v~~~~r 37 (118)
T 3ic5_A 5 RWNICVVGAGKIGQMIAALLKTSSNYSVTVADH 37 (118)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHCSSEEEEEEES
T ss_pred cCeEEEECCCHHHHHHHHHHHhCCCceEEEEeC
Confidence 358999999999999999999999 89999998
No 363
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=94.99 E-value=0.019 Score=55.07 Aligned_cols=34 Identities=24% Similarity=0.363 Sum_probs=31.8
Q ss_pred eeEEEcccHHHHHHHHHHHHcCCcEEEEEeCCCc
Q 011787 216 KLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADI 249 (477)
Q Consensus 216 ~v~IiG~G~~g~e~a~~l~~~g~~Vtli~~~~~~ 249 (477)
.|+|||||+.|+-+|..|++.|.+|+++++.+.+
T Consensus 6 DViIVGaGpaGl~~A~~La~~G~~V~v~Er~~~~ 39 (397)
T 3oz2_A 6 DVLVVGGGPGGSTAARYAAKYGLKTLMIEKRPEI 39 (397)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCEEEECSSSST
T ss_pred CEEEECcCHHHHHHHHHHHHCCCcEEEEeCCCCC
Confidence 4899999999999999999999999999998765
No 364
>3ihm_A Styrene monooxygenase A; rossman fold, anti-parallel beta strands, dimer, cavity, oxidoreductase; 2.30A {Pseudomonas putida}
Probab=94.74 E-value=0.026 Score=55.29 Aligned_cols=35 Identities=29% Similarity=0.445 Sum_probs=31.6
Q ss_pred CCCeeEEEcccHHHHHHHHHHHHcCCcEEEEEeCC
Q 011787 213 VPKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAA 247 (477)
Q Consensus 213 ~~~~v~IiG~G~~g~e~a~~l~~~g~~Vtli~~~~ 247 (477)
..++|+|||||+.|+.+|..|++.|.+|+++++.+
T Consensus 21 m~~~ViIVGaGpaGl~~A~~La~~G~~V~viE~~~ 55 (430)
T 3ihm_A 21 MKKRIGIVGAGTAGLHLGLFLRQHDVDVTVYTDRK 55 (430)
T ss_dssp --CEEEEECCHHHHHHHHHHHHHTTCEEEEEESCC
T ss_pred CCCCEEEECCcHHHHHHHHHHHHCCCeEEEEcCCC
Confidence 45789999999999999999999999999999876
No 365
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=94.29 E-value=0.093 Score=50.21 Aligned_cols=33 Identities=27% Similarity=0.464 Sum_probs=30.9
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCeEEEEecC
Q 011787 43 ENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKR 75 (477)
Q Consensus 43 ~~dvvIIGgG~AGl~aA~~l~~~g~~V~lie~~ 75 (477)
..+|+|||+|.+|+.+|..|+..|.+|+++|++
T Consensus 190 ~~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~~ 222 (405)
T 4dio_A 190 AAKIFVMGAGVAGLQAIATARRLGAVVSATDVR 222 (405)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSS
T ss_pred CCEEEEECCcHHHHHHHHHHHHCCCEEEEEcCC
Confidence 468999999999999999999999999999984
No 366
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=94.13 E-value=0.051 Score=43.70 Aligned_cols=31 Identities=19% Similarity=0.250 Sum_probs=29.5
Q ss_pred CcEEEECCChHHHHHHHHHHHCCCeEEEEec
Q 011787 44 NDVVVIGGGPGGYVAAIKAAQLGLKTTCIEK 74 (477)
Q Consensus 44 ~dvvIIGgG~AGl~aA~~l~~~g~~V~lie~ 74 (477)
.+++|+|+|..|...|..|.+.|.+|+++|+
T Consensus 7 ~~v~I~G~G~iG~~~a~~l~~~g~~v~~~d~ 37 (144)
T 2hmt_A 7 KQFAVIGLGRFGGSIVKELHRMGHEVLAVDI 37 (144)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCCEEEES
T ss_pred CcEEEECCCHHHHHHHHHHHHCCCEEEEEeC
Confidence 5799999999999999999999999999998
No 367
>3nix_A Flavoprotein/dehydrogenase; structural genomics, PSI-2, NES protein structure initiative, northeast structural genomics consortium; HET: FAD; 2.60A {Cytophaga hutchinsonii}
Probab=94.08 E-value=0.031 Score=54.33 Aligned_cols=33 Identities=33% Similarity=0.416 Sum_probs=31.1
Q ss_pred CeeEEEcccHHHHHHHHHHHHcCCcEEEEEeCC
Q 011787 215 KKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAA 247 (477)
Q Consensus 215 ~~v~IiG~G~~g~e~a~~l~~~g~~Vtli~~~~ 247 (477)
.+|+|||||+.|+.+|..|++.|.+|+++++.+
T Consensus 6 ~dVvIIGgG~aGl~~A~~La~~G~~V~v~E~~~ 38 (421)
T 3nix_A 6 VDVLVIGAGPAGTVAASLVNKSGFKVKIVEKQK 38 (421)
T ss_dssp EEEEEECCSHHHHHHHHHHHTTTCCEEEECSSC
T ss_pred CcEEEECCCHHHHHHHHHHHhCCCCEEEEeCCC
Confidence 479999999999999999999999999999876
No 368
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=94.05 E-value=0.047 Score=47.79 Aligned_cols=34 Identities=24% Similarity=0.249 Sum_probs=31.4
Q ss_pred CCCcEEEECCChHHHHHHHHHHHCCCeEEEEecC
Q 011787 42 DENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKR 75 (477)
Q Consensus 42 ~~~dvvIIGgG~AGl~aA~~l~~~g~~V~lie~~ 75 (477)
...+|+|||||..|...|..|.+.|.+|+|++++
T Consensus 30 ~gk~VLVVGgG~va~~ka~~Ll~~GA~VtVvap~ 63 (223)
T 3dfz_A 30 KGRSVLVVGGGTIATRRIKGFLQEGAAITVVAPT 63 (223)
T ss_dssp TTCCEEEECCSHHHHHHHHHHGGGCCCEEEECSS
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEECCC
Confidence 4578999999999999999999999999999873
No 369
>2iid_A L-amino-acid oxidase; flavoenzyme, FAD binding domain, reaction mechanism, sustrat binding, oxidoreductase; HET: NAG FUC PHE FAD; 1.80A {Calloselasma rhodostoma} SCOP: c.3.1.2 d.16.1.5 PDB: 1f8s_A* 1f8r_A* 1reo_A* 1tdk_A* 1tdn_A* 1tdo_A* 3kve_A* 4e0v_A*
Probab=94.04 E-value=0.043 Score=54.78 Aligned_cols=38 Identities=39% Similarity=0.546 Sum_probs=34.6
Q ss_pred CCCeeEEEcccHHHHHHHHHHHHcCCcEEEEEeCCCcC
Q 011787 213 VPKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIV 250 (477)
Q Consensus 213 ~~~~v~IiG~G~~g~e~a~~l~~~g~~Vtli~~~~~~~ 250 (477)
.+++|+|||+|.+|+.+|..|++.|.+|+++++++++.
T Consensus 32 ~~~~v~IiGaG~~Gl~aA~~l~~~g~~v~vlE~~~~~g 69 (498)
T 2iid_A 32 NPKHVVIVGAGMAGLSAAYVLAGAGHQVTVLEASERPG 69 (498)
T ss_dssp SCCEEEEECCBHHHHHHHHHHHHHTCEEEEECSSSSSB
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCCeEEEEECCCCCC
Confidence 36789999999999999999999999999999987763
No 370
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=94.00 E-value=0.023 Score=56.00 Aligned_cols=80 Identities=20% Similarity=0.147 Sum_probs=58.2
Q ss_pred CCCeeEEEcccHHHHHHHHHHHHcCCcEEEEEeCCCcCCCCCHHHHHHHHHHHHhcCcEEEeCceEEEEEEcCCeEEEEE
Q 011787 213 VPKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIVPSMDGEIRKQFQRSLEKQKMKFMLKTKVVGVDLSGDGVKLTL 292 (477)
Q Consensus 213 ~~~~v~IiG~G~~g~e~a~~l~~~g~~Vtli~~~~~~~~~~~~~~~~~~~~~l~~~gv~~~~~~~v~~i~~~~~~~~v~~ 292 (477)
.++++.|||.|.+|+.+|..|.+.|.+|+..+.++... + ...+.|++.|+++..+.....
T Consensus 8 ~~k~v~viG~G~sG~s~A~~l~~~G~~V~~~D~~~~~~---~-----~~~~~L~~~gi~~~~g~~~~~------------ 67 (451)
T 3lk7_A 8 ENKKVLVLGLARSGEAAARLLAKLGAIVTVNDGKPFDE---N-----PTAQSLLEEGIKVVCGSHPLE------------ 67 (451)
T ss_dssp TTCEEEEECCTTTHHHHHHHHHHTTCEEEEEESSCGGG---C-----HHHHHHHHTTCEEEESCCCGG------------
T ss_pred CCCEEEEEeeCHHHHHHHHHHHhCCCEEEEEeCCcccC---C-----hHHHHHHhCCCEEEECCChHH------------
Confidence 36899999999999999999999999999998765211 1 123467788999886643100
Q ss_pred eecCCCceEEEE-cCEEEEeecCCCCCCC
Q 011787 293 EPAAGGEKTILE-ADVVLVSAGRTPFTAG 320 (477)
Q Consensus 293 ~~~~~~~~~~i~-~D~vi~a~G~~p~~~~ 320 (477)
..-. +|.||++.|..|..+.
T Consensus 68 --------~~~~~~d~vv~spgi~~~~p~ 88 (451)
T 3lk7_A 68 --------LLDEDFCYMIKNPGIPYNNPM 88 (451)
T ss_dssp --------GGGSCEEEEEECTTSCTTSHH
T ss_pred --------hhcCCCCEEEECCcCCCCChh
Confidence 0011 7899999999886643
No 371
>3ka7_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: FAD; 1.80A {Methanosarcina mazei}
Probab=94.00 E-value=0.047 Score=53.14 Aligned_cols=34 Identities=41% Similarity=0.429 Sum_probs=32.0
Q ss_pred eeEEEcccHHHHHHHHHHHHcCCcEEEEEeCCCc
Q 011787 216 KLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADI 249 (477)
Q Consensus 216 ~v~IiG~G~~g~e~a~~l~~~g~~Vtli~~~~~~ 249 (477)
+|+|||+|..|+-+|..|++.|.+|+++++++.+
T Consensus 2 dVvVIGaGiaGLsaA~~La~~G~~V~vlE~~~~~ 35 (425)
T 3ka7_A 2 KTVVIGAGLGGLLSAARLSKAGHEVEVFERLPIT 35 (425)
T ss_dssp EEEEECCBHHHHHHHHHHHHTTCEEEEECSSSSS
T ss_pred cEEEECCCHHHHHHHHHHHhCCCceEEEeCCCCC
Confidence 6999999999999999999999999999998765
No 372
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=93.99 E-value=0.049 Score=52.72 Aligned_cols=36 Identities=33% Similarity=0.426 Sum_probs=33.1
Q ss_pred CCeeEEEcccHHHHHHHHHHHHcCCcEEEEEeCCCc
Q 011787 214 PKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADI 249 (477)
Q Consensus 214 ~~~v~IiG~G~~g~e~a~~l~~~g~~Vtli~~~~~~ 249 (477)
..+|+|||||+.|+-+|..|++.|.+|+++++.+.+
T Consensus 23 ~~dV~IVGaG~aGl~~A~~La~~G~~V~v~E~~~~~ 58 (407)
T 3rp8_A 23 HMKAIVIGAGIGGLSAAVALKQSGIDCDVYEAVKEI 58 (407)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSCC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCCC
Confidence 457999999999999999999999999999998755
No 373
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=93.93 E-value=0.061 Score=45.55 Aligned_cols=33 Identities=27% Similarity=0.224 Sum_probs=30.6
Q ss_pred CCcEEEECCChHHHHHHHHHHHC-CCeEEEEecC
Q 011787 43 ENDVVVIGGGPGGYVAAIKAAQL-GLKTTCIEKR 75 (477)
Q Consensus 43 ~~dvvIIGgG~AGl~aA~~l~~~-g~~V~lie~~ 75 (477)
..+++|||+|..|...|..|.+. |++|+++|++
T Consensus 39 ~~~v~IiG~G~~G~~~a~~L~~~~g~~V~vid~~ 72 (183)
T 3c85_A 39 HAQVLILGMGRIGTGAYDELRARYGKISLGIEIR 72 (183)
T ss_dssp TCSEEEECCSHHHHHHHHHHHHHHCSCEEEEESC
T ss_pred CCcEEEECCCHHHHHHHHHHHhccCCeEEEEECC
Confidence 45799999999999999999999 9999999983
No 374
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=93.85 E-value=0.039 Score=51.77 Aligned_cols=77 Identities=16% Similarity=0.100 Sum_probs=56.1
Q ss_pred CCeeEEEcccHHHHH-HHHHHHHcCCcEEEEEeCCCcCCCCCHHHHHHHHHHHHhcCcEEEeCceEEEEEEcCCeEEEEE
Q 011787 214 PKKLVVIGAGYIGLE-MGSVWARLGSEVTVVEFAADIVPSMDGEIRKQFQRSLEKQKMKFMLKTKVVGVDLSGDGVKLTL 292 (477)
Q Consensus 214 ~~~v~IiG~G~~g~e-~a~~l~~~g~~Vtli~~~~~~~~~~~~~~~~~~~~~l~~~gv~~~~~~~v~~i~~~~~~~~v~~ 292 (477)
.+++.|||.|-+|+. +|..|.++|.+|++.++.+.. . ..+.|++.|++++.+....
T Consensus 4 ~~~i~~iGiGg~Gms~~A~~L~~~G~~V~~~D~~~~~------~----~~~~L~~~gi~v~~g~~~~------------- 60 (326)
T 3eag_A 4 MKHIHIIGIGGTFMGGLAAIAKEAGFEVSGCDAKMYP------P----MSTQLEALGIDVYEGFDAA------------- 60 (326)
T ss_dssp CCEEEEESCCSHHHHHHHHHHHHTTCEEEEEESSCCT------T----HHHHHHHTTCEEEESCCGG-------------
T ss_pred CcEEEEEEECHHHHHHHHHHHHhCCCEEEEEcCCCCc------H----HHHHHHhCCCEEECCCCHH-------------
Confidence 578999999999997 889999999999999876531 1 2345677899887542210
Q ss_pred eecCCCceEE-EEcCEEEEeecCCCCCCC
Q 011787 293 EPAAGGEKTI-LEADVVLVSAGRTPFTAG 320 (477)
Q Consensus 293 ~~~~~~~~~~-i~~D~vi~a~G~~p~~~~ 320 (477)
.-. ..+|.||.+.|..|..+.
T Consensus 61 -------~l~~~~~d~vV~Spgi~~~~p~ 82 (326)
T 3eag_A 61 -------QLDEFKADVYVIGNVAKRGMDV 82 (326)
T ss_dssp -------GGGSCCCSEEEECTTCCTTCHH
T ss_pred -------HcCCCCCCEEEECCCcCCCCHH
Confidence 000 247999999999886653
No 375
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=93.84 E-value=0.07 Score=48.85 Aligned_cols=34 Identities=26% Similarity=0.323 Sum_probs=31.2
Q ss_pred CCCcEEEECCChHHHHHHHHHHHCCCeEEEEecC
Q 011787 42 DENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKR 75 (477)
Q Consensus 42 ~~~dvvIIGgG~AGl~aA~~l~~~g~~V~lie~~ 75 (477)
...+|.|||+|.-|...|..|++.|++|+++|++
T Consensus 3 ~~~kV~VIGaG~mG~~iA~~la~~G~~V~l~d~~ 36 (283)
T 4e12_A 3 GITNVTVLGTGVLGSQIAFQTAFHGFAVTAYDIN 36 (283)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSS
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCeEEEEeCC
Confidence 3468999999999999999999999999999983
No 376
>3k7m_X 6-hydroxy-L-nicotine oxidase; enantiomeric substrates, flavoenzymes, nicotine degradation, oxidoreductase; HET: FAD GP7; 1.95A {Arthrobacter nicotinovorans} PDB: 3k7q_X* 3ng7_X* 3ngc_X* 3nh3_X* 3nho_X* 3nk0_X* 3nk1_X* 3nk2_X* 3nn0_X* 3nn6_X* 3k7t_A*
Probab=93.68 E-value=0.057 Score=52.66 Aligned_cols=34 Identities=24% Similarity=0.475 Sum_probs=31.5
Q ss_pred eeEEEcccHHHHHHHHHHHHcCCcEEEEEeCCCc
Q 011787 216 KLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADI 249 (477)
Q Consensus 216 ~v~IiG~G~~g~e~a~~l~~~g~~Vtli~~~~~~ 249 (477)
+|+|||+|..|+-+|..|++.|.+|+++++++++
T Consensus 3 dVvVIGaG~aGl~aA~~L~~~G~~V~vlE~~~~~ 36 (431)
T 3k7m_X 3 DAIVVGGGFSGLKAARDLTNAGKKVLLLEGGERL 36 (431)
T ss_dssp EEEEECCBHHHHHHHHHHHHTTCCEEEECSSSSS
T ss_pred CEEEECCcHHHHHHHHHHHHcCCeEEEEecCCCc
Confidence 6899999999999999999999999999987654
No 377
>3dme_A Conserved exported protein; structural genomics, PSI-2, PROT structure initiative, northeast structural genomics consort NESG; HET: FAD TLA; 1.70A {Bordetella pertussis}
Probab=93.66 E-value=0.058 Score=51.16 Aligned_cols=34 Identities=41% Similarity=0.536 Sum_probs=31.5
Q ss_pred CeeEEEcccHHHHHHHHHHHHcCCcEEEEEeCCC
Q 011787 215 KKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAAD 248 (477)
Q Consensus 215 ~~v~IiG~G~~g~e~a~~l~~~g~~Vtli~~~~~ 248 (477)
.+|+|||+|..|+.+|..|++.|.+|+++++.+.
T Consensus 5 ~dvvIIG~G~~Gl~~A~~La~~G~~V~vlE~~~~ 38 (369)
T 3dme_A 5 IDCIVIGAGVVGLAIARALAAGGHEVLVAEAAEG 38 (369)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSS
T ss_pred CCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCC
Confidence 4699999999999999999999999999999863
No 378
>2e1m_A L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=93.61 E-value=0.066 Score=51.08 Aligned_cols=36 Identities=36% Similarity=0.760 Sum_probs=33.0
Q ss_pred CCeeEEEcccHHHHHHHHHHHHcCCcEEEEEeC-CCc
Q 011787 214 PKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFA-ADI 249 (477)
Q Consensus 214 ~~~v~IiG~G~~g~e~a~~l~~~g~~Vtli~~~-~~~ 249 (477)
+.+|+|||+|.+|+-+|..|.+.|.+|++++++ +++
T Consensus 44 ~~~V~IIGAGiaGL~aA~~L~~~G~~V~VlE~~~~~v 80 (376)
T 2e1m_A 44 PKRILIVGAGIAGLVAGDLLTRAGHDVTILEANANRV 80 (376)
T ss_dssp CCEEEEECCBHHHHHHHHHHHHTSCEEEEECSCSSCC
T ss_pred CceEEEECCCHHHHHHHHHHHHCCCcEEEEecccccc
Confidence 578999999999999999999999999999988 543
No 379
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=93.61 E-value=0.059 Score=47.14 Aligned_cols=31 Identities=26% Similarity=0.348 Sum_probs=29.5
Q ss_pred cEEEECCChHHHHHHHHHHHCCCeEEEEecC
Q 011787 45 DVVVIGGGPGGYVAAIKAAQLGLKTTCIEKR 75 (477)
Q Consensus 45 dvvIIGgG~AGl~aA~~l~~~g~~V~lie~~ 75 (477)
+|+|||+|..|...|..|.+.|++|+++|++
T Consensus 2 ~iiIiG~G~~G~~la~~L~~~g~~v~vid~~ 32 (218)
T 3l4b_C 2 KVIIIGGETTAYYLARSMLSRKYGVVIINKD 32 (218)
T ss_dssp CEEEECCHHHHHHHHHHHHHTTCCEEEEESC
T ss_pred EEEEECCCHHHHHHHHHHHhCCCeEEEEECC
Confidence 6999999999999999999999999999983
No 380
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=93.57 E-value=0.12 Score=48.99 Aligned_cols=33 Identities=36% Similarity=0.467 Sum_probs=30.8
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCeEEEEecC
Q 011787 43 ENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKR 75 (477)
Q Consensus 43 ~~dvvIIGgG~AGl~aA~~l~~~g~~V~lie~~ 75 (477)
..+|+|||+|..|+.+|..|+..|.+|+++|++
T Consensus 184 ~~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~~ 216 (381)
T 3p2y_A 184 PASALVLGVGVAGLQALATAKRLGAKTTGYDVR 216 (381)
T ss_dssp CCEEEEESCSHHHHHHHHHHHHHTCEEEEECSS
T ss_pred CCEEEEECchHHHHHHHHHHHHCCCEEEEEeCC
Confidence 468999999999999999999999999999984
No 381
>3nks_A Protoporphyrinogen oxidase; FAD containing protein, PPO, variegate porphyria disease, VP oxidoreductase-oxidoreductase inhibitor complex; HET: ACJ FAD; 1.90A {Homo sapiens}
Probab=93.54 E-value=0.057 Score=53.49 Aligned_cols=35 Identities=29% Similarity=0.462 Sum_probs=32.3
Q ss_pred CeeEEEcccHHHHHHHHHHHHcCC--cEEEEEeCCCc
Q 011787 215 KKLVVIGAGYIGLEMGSVWARLGS--EVTVVEFAADI 249 (477)
Q Consensus 215 ~~v~IiG~G~~g~e~a~~l~~~g~--~Vtli~~~~~~ 249 (477)
++|+|||||.+|+-+|..|++.|. +|+++++++++
T Consensus 3 ~dVvVIGaGiaGLsaA~~L~~~G~~~~V~vlEa~~~~ 39 (477)
T 3nks_A 3 RTVVVLGGGISGLAASYHLSRAPCPPKVVLVESSERL 39 (477)
T ss_dssp CEEEEECCBHHHHHHHHHHHTSSSCCEEEEECSSSSS
T ss_pred ceEEEECCcHHHHHHHHHHHhCCCCCcEEEEeCCCCC
Confidence 579999999999999999999999 99999987765
No 382
>1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1
Probab=93.52 E-value=0.046 Score=49.44 Aligned_cols=34 Identities=26% Similarity=0.439 Sum_probs=31.4
Q ss_pred CCCcEEEECCChHHHHHHHHHHHCCCeEEEEecC
Q 011787 42 DENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKR 75 (477)
Q Consensus 42 ~~~dvvIIGgG~AGl~aA~~l~~~g~~V~lie~~ 75 (477)
....|+|||||..|...+..|.+.|.+|+||+++
T Consensus 12 ~~k~VLVVGgG~va~rka~~Ll~~Ga~VtViap~ 45 (274)
T 1kyq_A 12 KDKRILLIGGGEVGLTRLYKLMPTGCKLTLVSPD 45 (274)
T ss_dssp TTCEEEEEEESHHHHHHHHHHGGGTCEEEEEEEE
T ss_pred CCCEEEEECCcHHHHHHHHHHHhCCCEEEEEcCC
Confidence 3578999999999999999999999999999983
No 383
>3v76_A Flavoprotein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: FDA; 2.51A {Sinorhizobium meliloti}
Probab=93.51 E-value=0.06 Score=52.35 Aligned_cols=36 Identities=28% Similarity=0.408 Sum_probs=32.4
Q ss_pred CCeeEEEcccHHHHHHHHHHHHcCCcEEEEEeCCCc
Q 011787 214 PKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADI 249 (477)
Q Consensus 214 ~~~v~IiG~G~~g~e~a~~l~~~g~~Vtli~~~~~~ 249 (477)
..+|+|||||+.|+.+|..+++.|.+|+++++.+.+
T Consensus 27 ~~dViIIGgG~AGl~aA~~La~~G~~V~llEk~~~~ 62 (417)
T 3v76_A 27 KQDVVIIGAGAAGMMCAIEAGKRGRRVLVIDHARAP 62 (417)
T ss_dssp -CCEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSS
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCcEEEEeCCCCC
Confidence 357999999999999999999999999999988754
No 384
>2oln_A NIKD protein; flavoprotein, rossmann fold, oxidoreductase; HET: FAD; 1.15A {Streptomyces tendae} PDB: 2olo_A* 3hzl_A* 2q6u_A*
Probab=93.46 E-value=0.068 Score=51.50 Aligned_cols=35 Identities=31% Similarity=0.366 Sum_probs=31.8
Q ss_pred CeeEEEcccHHHHHHHHHHHHcCCcEEEEEeCCCc
Q 011787 215 KKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADI 249 (477)
Q Consensus 215 ~~v~IiG~G~~g~e~a~~l~~~g~~Vtli~~~~~~ 249 (477)
.+|+|||+|.+|+.+|..|++.|.+|+++++.+..
T Consensus 5 ~DVvIIGaG~~Gl~~A~~La~~G~~V~vlE~~~~~ 39 (397)
T 2oln_A 5 YDVVVVGGGPVGLATAWQVAERGHRVLVLERHTFF 39 (397)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEESSCTT
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCC
Confidence 36999999999999999999999999999987643
No 385
>3c96_A Flavin-containing monooxygenase; FAD, oxidoreductase, PF01266, NESG, PAR240, structural genomics, PSI-2; HET: FAD; 1.90A {Pseudomonas aeruginosa PAO1} SCOP: c.3.1.2 d.16.1.2 PDB: 2rgj_A*
Probab=93.43 E-value=0.073 Score=51.61 Aligned_cols=35 Identities=29% Similarity=0.440 Sum_probs=32.5
Q ss_pred CeeEEEcccHHHHHHHHHHHHcCCc-EEEEEeCCCc
Q 011787 215 KKLVVIGAGYIGLEMGSVWARLGSE-VTVVEFAADI 249 (477)
Q Consensus 215 ~~v~IiG~G~~g~e~a~~l~~~g~~-Vtli~~~~~~ 249 (477)
.+|+|||||+.|+.+|..|++.|.+ |+++++.+.+
T Consensus 5 ~dVvIVGaG~aGl~~A~~L~~~G~~~v~v~E~~~~~ 40 (410)
T 3c96_A 5 IDILIAGAGIGGLSCALALHQAGIGKVTLLESSSEI 40 (410)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCSEEEEEESSSSC
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCCeEEEEECCCCc
Confidence 4799999999999999999999999 9999998765
No 386
>3cgv_A Geranylgeranyl reductase related protein; NP_393992.1, geranylgeranyl bacteriochlorophyll reductase- like FIXC homolog; HET: MSE FAD UNL; 1.60A {Thermoplasma acidophilum dsm 1728} PDB: 3oz2_A*
Probab=93.38 E-value=0.067 Score=51.40 Aligned_cols=34 Identities=24% Similarity=0.363 Sum_probs=31.8
Q ss_pred eeEEEcccHHHHHHHHHHHHcCCcEEEEEeCCCc
Q 011787 216 KLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADI 249 (477)
Q Consensus 216 ~v~IiG~G~~g~e~a~~l~~~g~~Vtli~~~~~~ 249 (477)
+|+|||||+.|+-+|..|++.|.+|+++++.+.+
T Consensus 6 dVvIvG~G~aGl~~A~~La~~G~~V~l~E~~~~~ 39 (397)
T 3cgv_A 6 DVLVVGGGPGGSTAARYAAKYGLKTLMIEKRPEI 39 (397)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCEEEECSSSST
T ss_pred CEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCC
Confidence 6999999999999999999999999999998754
No 387
>2b9w_A Putative aminooxidase; isomerase, conjugated linoleic acid, FAD; HET: FAD 12P; 1.95A {Propionibacterium acnes} PDB: 2b9x_A* 2b9y_A* 2ba9_A* 2bab_A* 2bac_A*
Probab=93.33 E-value=0.07 Score=51.91 Aligned_cols=36 Identities=28% Similarity=0.529 Sum_probs=33.1
Q ss_pred CCeeEEEcccHHHHHHHHHHHHcC-CcEEEEEeCCCc
Q 011787 214 PKKLVVIGAGYIGLEMGSVWARLG-SEVTVVEFAADI 249 (477)
Q Consensus 214 ~~~v~IiG~G~~g~e~a~~l~~~g-~~Vtli~~~~~~ 249 (477)
..+|+|||+|..|+-+|..|++.| .+|+++++++++
T Consensus 6 ~~~v~IIGaG~aGl~aA~~L~~~g~~~v~v~E~~~~~ 42 (424)
T 2b9w_A 6 DSRIAIIGAGPAGLAAGMYLEQAGFHDYTILERTDHV 42 (424)
T ss_dssp TCCEEEECCSHHHHHHHHHHHHTTCCCEEEECSSSCS
T ss_pred CCCEEEECcCHHHHHHHHHHHhCCCCcEEEEECCCCC
Confidence 467999999999999999999999 899999988765
No 388
>3g5s_A Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TRMFO; tRNA methyltransferase FAD folate, FAD, flavoprotein; HET: MSE FAD GSH; 1.05A {Thermus thermophilus} PDB: 3g5q_A* 3g5r_A*
Probab=93.30 E-value=0.072 Score=50.72 Aligned_cols=33 Identities=33% Similarity=0.519 Sum_probs=30.7
Q ss_pred CeeEEEcccHHHHHHHHHHHHcCCcEEEEEeCC
Q 011787 215 KKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAA 247 (477)
Q Consensus 215 ~~v~IiG~G~~g~e~a~~l~~~g~~Vtli~~~~ 247 (477)
++|+|||+|+.|++.|..+++.|.+|+++++++
T Consensus 2 ~dViVIGgG~AG~~AA~~la~~G~~V~liE~~~ 34 (443)
T 3g5s_A 2 ERVNVVGAGLAGSEAAWTLLRLGVPVRLFEMRP 34 (443)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEECCTT
T ss_pred CCEEEECchHHHHHHHHHHHHCCCcEEEEeccC
Confidence 469999999999999999999999999999765
No 389
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A*
Probab=93.25 E-value=0.068 Score=51.11 Aligned_cols=33 Identities=27% Similarity=0.381 Sum_probs=31.0
Q ss_pred CeeEEEcccHHHHHHHHHHHHcCCcEEEEEeCC
Q 011787 215 KKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAA 247 (477)
Q Consensus 215 ~~v~IiG~G~~g~e~a~~l~~~g~~Vtli~~~~ 247 (477)
.+|+|||||..|+.+|..|++.|.+|+++++.+
T Consensus 18 ~dvvIIGgG~~Gl~~A~~La~~G~~V~llE~~~ 50 (382)
T 1ryi_A 18 YEAVVIGGGIIGSAIAYYLAKENKNTALFESGT 50 (382)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred CCEEEECcCHHHHHHHHHHHhCCCcEEEEeCCC
Confidence 479999999999999999999999999999875
No 390
>2uzz_A N-methyl-L-tryptophan oxidase; N-methyltryptophan oxidase (MTOX), oxidative demethylation of N-methyl-L-tryptophan, FAD, flavoenzyme; HET: FAD; 3.2A {Escherichia coli}
Probab=93.25 E-value=0.058 Score=51.39 Aligned_cols=34 Identities=26% Similarity=0.434 Sum_probs=31.2
Q ss_pred CeeEEEcccHHHHHHHHHHHHcCCcEEEEEeCCC
Q 011787 215 KKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAAD 248 (477)
Q Consensus 215 ~~v~IiG~G~~g~e~a~~l~~~g~~Vtli~~~~~ 248 (477)
.+|+|||+|.+|+.+|..|++.|.+|+++++.+.
T Consensus 3 ~dvvIIG~Gi~Gl~~A~~La~~G~~V~vle~~~~ 36 (372)
T 2uzz_A 3 YDLIIIGSGSVGAAAGYYATRAGLNVLMTDAHMP 36 (372)
T ss_dssp EEEEESCTTHHHHHHHHHHHHTTCCEEEECSSCS
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCeEEEEecCCC
Confidence 3699999999999999999999999999998764
No 391
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=93.25 E-value=0.097 Score=51.46 Aligned_cols=34 Identities=29% Similarity=0.362 Sum_probs=31.4
Q ss_pred CCCcEEEECCChHHHHHHHHHHHCCCeEEEEecC
Q 011787 42 DENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKR 75 (477)
Q Consensus 42 ~~~dvvIIGgG~AGl~aA~~l~~~g~~V~lie~~ 75 (477)
...+|.|||.|.+|+++|..|++.|++|++.|.+
T Consensus 8 ~~k~v~viG~G~sG~s~A~~l~~~G~~V~~~D~~ 41 (451)
T 3lk7_A 8 ENKKVLVLGLARSGEAAARLLAKLGAIVTVNDGK 41 (451)
T ss_dssp TTCEEEEECCTTTHHHHHHHHHHTTCEEEEEESS
T ss_pred CCCEEEEEeeCHHHHHHHHHHHhCCCEEEEEeCC
Confidence 3578999999999999999999999999999984
No 392
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=93.17 E-value=0.1 Score=48.17 Aligned_cols=33 Identities=33% Similarity=0.374 Sum_probs=30.5
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCeEEEEecC
Q 011787 43 ENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKR 75 (477)
Q Consensus 43 ~~dvvIIGgG~AGl~aA~~l~~~g~~V~lie~~ 75 (477)
..+|.|||+|.-|...|..|++.|++|+++|++
T Consensus 15 ~~~I~VIG~G~mG~~iA~~la~~G~~V~~~d~~ 47 (302)
T 1f0y_A 15 VKHVTVIGGGLMGAGIAQVAAATGHTVVLVDQT 47 (302)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCeEEEEECC
Confidence 357999999999999999999999999999983
No 393
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=93.16 E-value=0.34 Score=38.79 Aligned_cols=35 Identities=17% Similarity=0.308 Sum_probs=31.6
Q ss_pred CCCeeEEEcccHHHHHHHHHHHHcCCcEEEEEeCC
Q 011787 213 VPKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAA 247 (477)
Q Consensus 213 ~~~~v~IiG~G~~g~e~a~~l~~~g~~Vtli~~~~ 247 (477)
..++++|+|.|..|..+|..|.+.|.+|+++++++
T Consensus 6 ~~~~viIiG~G~~G~~la~~L~~~g~~v~vid~~~ 40 (140)
T 3fwz_A 6 ICNHALLVGYGRVGSLLGEKLLASDIPLVVIETSR 40 (140)
T ss_dssp CCSCEEEECCSHHHHHHHHHHHHTTCCEEEEESCH
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCH
Confidence 35789999999999999999999999999998753
No 394
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=93.13 E-value=0.11 Score=42.59 Aligned_cols=35 Identities=26% Similarity=0.414 Sum_probs=32.0
Q ss_pred CCCeeEEEcccHHHHHHHHHHHHcCCcEEEEEeCC
Q 011787 213 VPKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAA 247 (477)
Q Consensus 213 ~~~~v~IiG~G~~g~e~a~~l~~~g~~Vtli~~~~ 247 (477)
.+++++|+|+|.+|..++..|.+.|.+|+++.+++
T Consensus 18 ~~~~v~IiG~G~iG~~la~~L~~~g~~V~vid~~~ 52 (155)
T 2g1u_A 18 KSKYIVIFGCGRLGSLIANLASSSGHSVVVVDKNE 52 (155)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCG
T ss_pred CCCcEEEECCCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 46789999999999999999999999999998765
No 395
>1rsg_A FMS1 protein; FAD binding motif, oxidoreductase; HET: FAD; 1.90A {Saccharomyces cerevisiae} PDB: 1z6l_A* 3bi2_A* 3bi4_A* 3bi5_A* 3bnm_B* 3bnu_B* 3cn8_B* 3cnd_B* 3cnp_B* 3cns_A* 3cnt_B* 1yy5_A* 1xpq_A*
Probab=93.10 E-value=0.078 Score=53.18 Aligned_cols=35 Identities=34% Similarity=0.571 Sum_probs=32.2
Q ss_pred CeeEEEcccHHHHHHHHHHHHcC-CcEEEEEeCCCc
Q 011787 215 KKLVVIGAGYIGLEMGSVWARLG-SEVTVVEFAADI 249 (477)
Q Consensus 215 ~~v~IiG~G~~g~e~a~~l~~~g-~~Vtli~~~~~~ 249 (477)
.+|+|||+|.+|+-+|..|++.| .+|+++++++++
T Consensus 9 ~~VvIIGaG~aGL~AA~~L~~~G~~~V~VlEa~~ri 44 (516)
T 1rsg_A 9 KKVIIIGAGIAGLKAASTLHQNGIQDCLVLEARDRV 44 (516)
T ss_dssp EEEEEECCBHHHHHHHHHHHHTTCCSEEEECSSSSS
T ss_pred CcEEEECCCHHHHHHHHHHHhcCCCCEEEEeCCCCC
Confidence 57999999999999999999999 999999987754
No 396
>2jae_A L-amino acid oxidase; oxidoreductase, dimerisation mode, hydride transfer mechanism, GR2-family, flavoenzyme, FAD containing; HET: FAD; 1.25A {Rhodococcus opacus} PDB: 2jb1_A* 2jb2_A* 2jb3_A*
Probab=93.06 E-value=0.085 Score=52.42 Aligned_cols=36 Identities=31% Similarity=0.374 Sum_probs=33.3
Q ss_pred CCeeEEEcccHHHHHHHHHHHHcCCcEEEEEeCCCc
Q 011787 214 PKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADI 249 (477)
Q Consensus 214 ~~~v~IiG~G~~g~e~a~~l~~~g~~Vtli~~~~~~ 249 (477)
..+|+|||+|.+|+-+|..|++.|.+|+++++.+++
T Consensus 11 ~~~v~IIGaG~aGl~aA~~L~~~g~~v~v~E~~~~~ 46 (489)
T 2jae_A 11 SHSVVVLGGGPAGLCSAFELQKAGYKVTVLEARTRP 46 (489)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSS
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCCEEEEeccCCC
Confidence 568999999999999999999999999999988765
No 397
>2gf3_A MSOX, monomeric sarcosine oxidase; flavoprotein oxidase, inhibitor 2-furoic acid, oxidoreductas; HET: FAD; 1.30A {Bacillus SP} SCOP: c.3.1.2 d.16.1.3 PDB: 1el7_A* 1el8_A* 1el9_A* 1eli_A* 1l9e_A* 2a89_A* 2gb0_A* 1el5_A* 3qse_A* 3qsm_A* 3qss_A* 3bhk_A* 3bhf_A* 3m12_A* 3m13_A* 3m0o_A* 1l9c_A* 1l9d_A* 1zov_A*
Probab=93.06 E-value=0.076 Score=50.85 Aligned_cols=34 Identities=26% Similarity=0.465 Sum_probs=31.2
Q ss_pred CeeEEEcccHHHHHHHHHHHHcCCcEEEEEeCCC
Q 011787 215 KKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAAD 248 (477)
Q Consensus 215 ~~v~IiG~G~~g~e~a~~l~~~g~~Vtli~~~~~ 248 (477)
.+|+|||+|..|+.+|..|++.|.+|+++++.+.
T Consensus 4 ~dvvIIGaG~~Gl~~A~~La~~G~~V~vie~~~~ 37 (389)
T 2gf3_A 4 FDVIVVGAGSMGMAAGYQLAKQGVKTLLVDAFDP 37 (389)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCS
T ss_pred CCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCC
Confidence 3699999999999999999999999999998764
No 398
>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*
Probab=93.01 E-value=0.11 Score=48.72 Aligned_cols=33 Identities=21% Similarity=0.171 Sum_probs=30.4
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCC-eEEEEecC
Q 011787 43 ENDVVVIGGGPGGYVAAIKAAQLGL-KTTCIEKR 75 (477)
Q Consensus 43 ~~dvvIIGgG~AGl~aA~~l~~~g~-~V~lie~~ 75 (477)
.++|.|||+|..|.+.|..|++.|+ +|+|+|.+
T Consensus 9 ~~kI~VIGaG~vG~~lA~~la~~g~~~V~L~D~~ 42 (331)
T 1pzg_A 9 RKKVAMIGSGMIGGTMGYLCALRELADVVLYDVV 42 (331)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCEEEEECSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCeEEEEECC
Confidence 4689999999999999999999997 99999984
No 399
>1c0p_A D-amino acid oxidase; alpha-beta-alpha motif, flavin containing protein, oxidoreductase; HET: FAD; 1.20A {Rhodosporidium toruloides} SCOP: c.4.1.2 d.16.1.3 PDB: 1c0i_A* 1c0l_A* 1c0k_A*
Probab=92.98 E-value=0.089 Score=49.97 Aligned_cols=33 Identities=36% Similarity=0.585 Sum_probs=30.6
Q ss_pred CeeEEEcccHHHHHHHHHHHHcCCcEEEEEeCC
Q 011787 215 KKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAA 247 (477)
Q Consensus 215 ~~v~IiG~G~~g~e~a~~l~~~g~~Vtli~~~~ 247 (477)
.+|+|||+|.+|+-+|..|++.|.+|+++++..
T Consensus 7 ~dVvVIG~Gi~Gls~A~~La~~G~~V~vle~~~ 39 (363)
T 1c0p_A 7 KRVVVLGSGVIGLSSALILARKGYSVHILARDL 39 (363)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred CCEEEECCCHHHHHHHHHHHhCCCEEEEEeccC
Confidence 579999999999999999999999999999753
No 400
>1s3e_A Amine oxidase [flavin-containing] B; human monoamine oxidase, inhibitor binding, rasagiline, enantioselectivity, oxidoreductase; HET: FAD RHP; 1.60A {Homo sapiens} SCOP: c.3.1.2 d.16.1.5 PDB: 1gos_A* 1oj9_A* 1ojb_A* 1ojc_A* 1ojd_A* 1s2q_A* 1s2y_A* 1oja_A* 1s3b_A* 2bk3_A* 2byb_A* 2c64_A* 2c65_A* 2c66_A* 2c67_A* 2c70_A* 2v5z_A* 2v60_A* 2v61_A* 2vrl_A* ...
Probab=92.96 E-value=0.081 Score=53.10 Aligned_cols=35 Identities=26% Similarity=0.430 Sum_probs=32.5
Q ss_pred CeeEEEcccHHHHHHHHHHHHcCCcEEEEEeCCCc
Q 011787 215 KKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADI 249 (477)
Q Consensus 215 ~~v~IiG~G~~g~e~a~~l~~~g~~Vtli~~~~~~ 249 (477)
.+|+|||||..|+.+|..|++.|.+|+++++++++
T Consensus 5 ~~vvIIGaG~aGL~aA~~L~~~G~~V~vlE~~~~~ 39 (520)
T 1s3e_A 5 CDVVVVGGGISGMAAAKLLHDSGLNVVVLEARDRV 39 (520)
T ss_dssp CSEEEECCBHHHHHHHHHHHHTTCCEEEECSSSSS
T ss_pred ceEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCC
Confidence 57999999999999999999999999999988765
No 401
>2bcg_G Secretory pathway GDP dissociation inhibitor; RABGTPase, geranylgeranylation, vesicular transport, protein transport; HET: GDP GER; 1.48A {Saccharomyces cerevisiae} SCOP: c.3.1.3 c.3.1.3 d.16.1.6 PDB: 1ukv_G* 3cpi_G 3cph_G 3cpj_G*
Probab=92.96 E-value=0.079 Score=52.18 Aligned_cols=36 Identities=14% Similarity=0.217 Sum_probs=33.6
Q ss_pred CeeEEEcccHHHHHHHHHHHHcCCcEEEEEeCCCcC
Q 011787 215 KKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIV 250 (477)
Q Consensus 215 ~~v~IiG~G~~g~e~a~~l~~~g~~Vtli~~~~~~~ 250 (477)
.+|+|||+|..|+-+|..|++.|.+|+++++++++.
T Consensus 12 ~dvvVIGaG~~GL~aA~~La~~G~~V~vlE~~~~~G 47 (453)
T 2bcg_G 12 YDVIVLGTGITECILSGLLSVDGKKVLHIDKQDHYG 47 (453)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSC
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCeEEEEeCCCCCC
Confidence 469999999999999999999999999999998774
No 402
>2a9f_A Putative malic enzyme ((S)-malate:NAD+ oxidoreductase (decarboxylating)); hypothetical protein, structural genomics, PSI; 2.50A {Streptococcus pyogenes}
Probab=92.90 E-value=0.091 Score=49.76 Aligned_cols=35 Identities=40% Similarity=0.575 Sum_probs=31.7
Q ss_pred CCCcEEEECCChHHHHHHHHHHHCCC-eEEEEecCC
Q 011787 42 DENDVVVIGGGPGGYVAAIKAAQLGL-KTTCIEKRG 76 (477)
Q Consensus 42 ~~~dvvIIGgG~AGl~aA~~l~~~g~-~V~lie~~~ 76 (477)
...+|||+|+|.||+.+|..|...|. +|+++|++.
T Consensus 187 ~d~kVVi~GAGaAG~~iA~ll~~~Ga~~I~v~D~~G 222 (398)
T 2a9f_A 187 DEVSIVVNGGGSAGLSITRKLLAAGATKVTVVDKFG 222 (398)
T ss_dssp TSCEEEEECCSHHHHHHHHHHHHHTCCEEEEEETTE
T ss_pred CccEEEEECCCHHHHHHHHHHHHcCCCeEEEEECCC
Confidence 35789999999999999999999998 899999953
No 403
>1y56_B Sarcosine oxidase; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=92.79 E-value=0.081 Score=50.58 Aligned_cols=33 Identities=39% Similarity=0.633 Sum_probs=30.8
Q ss_pred CeeEEEcccHHHHHHHHHHHHcCCcEEEEEeCC
Q 011787 215 KKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAA 247 (477)
Q Consensus 215 ~~v~IiG~G~~g~e~a~~l~~~g~~Vtli~~~~ 247 (477)
.+|+|||+|.+|+.+|..|++.|.+|+++++..
T Consensus 6 ~dVvIIGgGi~Gl~~A~~La~~G~~V~lle~~~ 38 (382)
T 1y56_B 6 SEIVVIGGGIVGVTIAHELAKRGEEVTVIEKRF 38 (382)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCC
Confidence 469999999999999999999999999999874
No 404
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=92.78 E-value=0.1 Score=49.39 Aligned_cols=32 Identities=25% Similarity=0.241 Sum_probs=30.1
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCeEEEEec
Q 011787 43 ENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEK 74 (477)
Q Consensus 43 ~~dvvIIGgG~AGl~aA~~l~~~g~~V~lie~ 74 (477)
+++|.|||+|..|...|..|.+.|++|+++++
T Consensus 4 ~mki~iiG~G~~G~~~a~~L~~~g~~V~~~~r 35 (359)
T 1bg6_A 4 SKTYAVLGLGNGGHAFAAYLALKGQSVLAWDI 35 (359)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECS
T ss_pred cCeEEEECCCHHHHHHHHHHHhCCCEEEEEeC
Confidence 46899999999999999999999999999988
No 405
>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*
Probab=92.73 E-value=0.14 Score=47.84 Aligned_cols=34 Identities=24% Similarity=0.263 Sum_probs=30.6
Q ss_pred CCCcEEEECCChHHHHHHHHHHHCCC-eEEEEecC
Q 011787 42 DENDVVVIGGGPGGYVAAIKAAQLGL-KTTCIEKR 75 (477)
Q Consensus 42 ~~~dvvIIGgG~AGl~aA~~l~~~g~-~V~lie~~ 75 (477)
...+|.|||+|..|...|..|+..|+ +|+|+|.+
T Consensus 3 ~~~kI~VIGaG~vG~~ia~~la~~g~~~v~L~Di~ 37 (322)
T 1t2d_A 3 PKAKIVLVGSGMIGGVMATLIVQKNLGDVVLFDIV 37 (322)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSS
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCeEEEEeCC
Confidence 34689999999999999999999997 99999974
No 406
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=92.65 E-value=0.13 Score=44.88 Aligned_cols=75 Identities=20% Similarity=0.291 Sum_probs=51.2
Q ss_pred CCCeeEEEcccHHHHHHHHHHHHcCCcEEEEEeCCCcCCCCCHHHHHHHHHHHHhcCcEEEeCceEEEEEEcCCeEEEEE
Q 011787 213 VPKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIVPSMDGEIRKQFQRSLEKQKMKFMLKTKVVGVDLSGDGVKLTL 292 (477)
Q Consensus 213 ~~~~v~IiG~G~~g~e~a~~l~~~g~~Vtli~~~~~~~~~~~~~~~~~~~~~l~~~gv~~~~~~~v~~i~~~~~~~~v~~ 292 (477)
.+++++|||||.+|...+..|.+.|.+|+++.+. ..+++ .+..++.++.+..... .
T Consensus 30 ~gk~VLVVGgG~va~~ka~~Ll~~GA~VtVvap~------~~~~l----~~l~~~~~i~~i~~~~------~-------- 85 (223)
T 3dfz_A 30 KGRSVLVVGGGTIATRRIKGFLQEGAAITVVAPT------VSAEI----NEWEAKGQLRVKRKKV------G-------- 85 (223)
T ss_dssp TTCCEEEECCSHHHHHHHHHHGGGCCCEEEECSS------CCHHH----HHHHHTTSCEEECSCC------C--------
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEECCC------CCHHH----HHHHHcCCcEEEECCC------C--------
Confidence 4789999999999999999999999999999743 23443 3333445566543211 0
Q ss_pred eecCCCceEEEEcCEEEEeecCCCC
Q 011787 293 EPAAGGEKTILEADVVLVSAGRTPF 317 (477)
Q Consensus 293 ~~~~~~~~~~i~~D~vi~a~G~~p~ 317 (477)
....-.+|+||.|||....
T Consensus 86 ------~~dL~~adLVIaAT~d~~~ 104 (223)
T 3dfz_A 86 ------EEDLLNVFFIVVATNDQAV 104 (223)
T ss_dssp ------GGGSSSCSEEEECCCCTHH
T ss_pred ------HhHhCCCCEEEECCCCHHH
Confidence 0111238999999887643
No 407
>2x5o_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; ATP-binding, cell cycle, cell division, cell shape, cell WAL biogenesis/degradation; HET: KCX VSV; 1.46A {Escherichia coli} PDB: 2wjp_A* 2xpc_A* 2y1o_A* 2jff_A* 2jfh_A* 2uuo_A* 2uup_A* 2vtd_A* 2vte_A* 2jfg_A* 2y66_A* 2y67_A* 2y68_A* 4uag_A* 1e0d_A* 1uag_A* 1eeh_A* 3uag_A* 2uag_A*
Probab=92.58 E-value=0.077 Score=52.00 Aligned_cols=34 Identities=24% Similarity=0.292 Sum_probs=31.1
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCeEEEEecCC
Q 011787 43 ENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRG 76 (477)
Q Consensus 43 ~~dvvIIGgG~AGl~aA~~l~~~g~~V~lie~~~ 76 (477)
..+|+|||.|.+|+++|..|++.|++|+++|.+.
T Consensus 5 ~~~v~viG~G~~G~~~a~~l~~~G~~v~~~D~~~ 38 (439)
T 2x5o_A 5 GKNVVIIGLGLTGLSCVDFFLARGVTPRVMDTRM 38 (439)
T ss_dssp TCCEEEECCHHHHHHHHHHHHTTTCCCEEEESSS
T ss_pred CCEEEEEeecHHHHHHHHHHHhCCCEEEEEECCC
Confidence 3579999999999999999999999999999854
No 408
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=92.57 E-value=0.12 Score=48.96 Aligned_cols=35 Identities=20% Similarity=0.265 Sum_probs=31.7
Q ss_pred CCCCcEEEECCChHHHHHHHHHHHCCCeEEEEecC
Q 011787 41 SDENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKR 75 (477)
Q Consensus 41 ~~~~dvvIIGgG~AGl~aA~~l~~~g~~V~lie~~ 75 (477)
+..++|.|||+|.-|.+.|..|++.|++|++++++
T Consensus 27 ~~~mkI~VIGaG~mG~alA~~La~~G~~V~l~~r~ 61 (356)
T 3k96_A 27 PFKHPIAILGAGSWGTALALVLARKGQKVRLWSYE 61 (356)
T ss_dssp CCCSCEEEECCSHHHHHHHHHHHTTTCCEEEECSC
T ss_pred ccCCeEEEECccHHHHHHHHHHHHCCCeEEEEeCC
Confidence 34578999999999999999999999999999983
No 409
>2bi7_A UDP-galactopyranose mutase; FAD, flavoprotein, isomerase, lipopolysaccharide biosynthesi; HET: FAD; 2.0A {Klebsiella pneumoniae} SCOP: c.4.1.3 d.16.1.7 PDB: 2bi8_A* 1wam_A* 3inr_A* 3gf4_A* 3int_A* 3kyb_A*
Probab=92.51 E-value=0.11 Score=49.84 Aligned_cols=35 Identities=31% Similarity=0.648 Sum_probs=32.2
Q ss_pred CeeEEEcccHHHHHHHHHHHHcCCcEEEEEeCCCc
Q 011787 215 KKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADI 249 (477)
Q Consensus 215 ~~v~IiG~G~~g~e~a~~l~~~g~~Vtli~~~~~~ 249 (477)
.+++|||+|.+|+.+|..|++.|.+|+++++++++
T Consensus 4 ~~v~iiG~G~~Gl~~A~~l~~~g~~v~v~E~~~~~ 38 (384)
T 2bi7_A 4 KKILIVGAGFSGAVIGRQLAEKGHQVHIIDQRDHI 38 (384)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSSS
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCcEEEEEecCCc
Confidence 47999999999999999999999999999988765
No 410
>3nyc_A D-arginine dehydrogenase; FAD, imino-arginine, oxidoreductas; HET: FAD IAR; 1.06A {Pseudomonas aeruginosa} PDB: 3nye_A* 3nyf_A* 3sm8_A*
Probab=92.47 E-value=0.084 Score=50.33 Aligned_cols=35 Identities=31% Similarity=0.366 Sum_probs=31.5
Q ss_pred CCeeEEEcccHHHHHHHHHHHHcCCcEEEEEeCCCc
Q 011787 214 PKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADI 249 (477)
Q Consensus 214 ~~~v~IiG~G~~g~e~a~~l~~~g~~Vtli~~~~~~ 249 (477)
.++|+|||+|.+|+-+|..|+ .|.+|+++++.+.+
T Consensus 9 ~~dv~IIGaGi~Gls~A~~La-~G~~V~vlE~~~~~ 43 (381)
T 3nyc_A 9 EADYLVIGAGIAGASTGYWLS-AHGRVVVLEREAQP 43 (381)
T ss_dssp ECSEEEECCSHHHHHHHHHHT-TTSCEEEECSSSST
T ss_pred cCCEEEECCcHHHHHHHHHHh-CCCCEEEEECCCCc
Confidence 468999999999999999999 59999999988644
No 411
>2ivd_A PPO, PPOX, protoporphyrinogen oxidase; porphyrin biosynthesis, chlorophyll biosynthesis, oxidoreductase, HAEM biosynthesis, heme biosynthesis; HET: ACJ FAD TWN; 2.3A {Myxococcus xanthus} SCOP: c.3.1.2 d.16.1.5 PDB: 2ive_A*
Probab=92.45 E-value=0.1 Score=51.69 Aligned_cols=36 Identities=22% Similarity=0.422 Sum_probs=32.6
Q ss_pred CCeeEEEcccHHHHHHHHHHHHcCCcEEEEEeCCCc
Q 011787 214 PKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADI 249 (477)
Q Consensus 214 ~~~v~IiG~G~~g~e~a~~l~~~g~~Vtli~~~~~~ 249 (477)
..+|+|||+|..|+-+|..|++.|.+|+++++++++
T Consensus 16 ~~~v~iiG~G~~Gl~aa~~l~~~g~~v~v~E~~~~~ 51 (478)
T 2ivd_A 16 GMNVAVVGGGISGLAVAHHLRSRGTDAVLLESSARL 51 (478)
T ss_dssp -CCEEEECCBHHHHHHHHHHHTTTCCEEEECSSSSS
T ss_pred CCcEEEECCCHHHHHHHHHHHHCCCCEEEEEcCCCC
Confidence 468999999999999999999999999999988764
No 412
>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}
Probab=92.34 E-value=0.16 Score=47.03 Aligned_cols=36 Identities=28% Similarity=0.300 Sum_probs=32.3
Q ss_pred CCCCCCcEEEECCChHHHHHHHHHHHCCC-eEEEEec
Q 011787 39 SASDENDVVVIGGGPGGYVAAIKAAQLGL-KTTCIEK 74 (477)
Q Consensus 39 ~~~~~~dvvIIGgG~AGl~aA~~l~~~g~-~V~lie~ 74 (477)
|++...+|.|||+|..|.+.|..|+..|+ +|+++|.
T Consensus 4 m~~~~~kv~ViGaG~vG~~ia~~l~~~g~~~v~l~D~ 40 (315)
T 3tl2_A 4 MTIKRKKVSVIGAGFTGATTAFLLAQKELADVVLVDI 40 (315)
T ss_dssp CCCCCCEEEEECCSHHHHHHHHHHHHTTCCEEEEECC
T ss_pred cccCCCEEEEECCCHHHHHHHHHHHhCCCCeEEEEec
Confidence 44456789999999999999999999999 9999998
No 413
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=92.32 E-value=0.14 Score=48.19 Aligned_cols=32 Identities=16% Similarity=0.286 Sum_probs=30.1
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCeEEEEec
Q 011787 43 ENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEK 74 (477)
Q Consensus 43 ~~dvvIIGgG~AGl~aA~~l~~~g~~V~lie~ 74 (477)
.++|.|||+|.-|.+.|..|++.|.+|+++++
T Consensus 3 ~mkI~IiGaG~~G~~~a~~L~~~g~~V~~~~r 34 (335)
T 3ghy_A 3 LTRICIVGAGAVGGYLGARLALAGEAINVLAR 34 (335)
T ss_dssp CCCEEEESCCHHHHHHHHHHHHTTCCEEEECC
T ss_pred CCEEEEECcCHHHHHHHHHHHHCCCEEEEEEC
Confidence 35899999999999999999999999999987
No 414
>3fpz_A Thiazole biosynthetic enzyme; FAD, mitochondrion, N thiamine biosynthesis, transit peptide, biosynthetic protei; HET: AHZ; 1.82A {Saccharomyces cerevisiae}
Probab=92.31 E-value=0.1 Score=48.78 Aligned_cols=65 Identities=18% Similarity=0.236 Sum_probs=44.9
Q ss_pred CCeeEEEcccHHHHHHHHHHHH--cCCcEEEEEeCCCcCCC-------CC-HHHHHHHHHHHHhcCcEEEeCceE
Q 011787 214 PKKLVVIGAGYIGLEMGSVWAR--LGSEVTVVEFAADIVPS-------MD-GEIRKQFQRSLEKQKMKFMLKTKV 278 (477)
Q Consensus 214 ~~~v~IiG~G~~g~e~a~~l~~--~g~~Vtli~~~~~~~~~-------~~-~~~~~~~~~~l~~~gv~~~~~~~v 278 (477)
...|+|||+|+.|+.+|..|++ .|.+|+++++.+.+... ++ ..+...+.+.+++.|+++..+...
T Consensus 65 ~~DV~IIGaGPAGlsAA~~la~~r~G~~V~viEk~~~~GG~~~~~~~~~~~~~l~~~~~~~~~e~Gv~~~~~~~~ 139 (326)
T 3fpz_A 65 VSDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAPGGGSWLGGQLFSAMVMRKPAHLFLQELEIPYEDEGDY 139 (326)
T ss_dssp EESEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSSSCCTTTTCCSTTCCCEEEETTTHHHHHHTTCCCEECSSE
T ss_pred CCCEEEECCCHHHHHHHHHHHHhCCCCeEEEEECCCCCCceEEeCCccCCHHHHHHHHHHHHHHcCCEEEECCcc
Confidence 4579999999999999999974 59999999988765210 11 112223445567778887765443
No 415
>2e4g_A Tryptophan halogenase; flavin-binding, rebeccamycin biosynthesis, biosynthetic protein, flavoprotein; HET: TRP; 2.08A {Lechevalieria aerocolonigenes} PDB: 2o9z_A 2oa1_A* 2oal_A* 2oam_A
Probab=92.28 E-value=0.095 Score=53.01 Aligned_cols=34 Identities=18% Similarity=0.365 Sum_probs=31.4
Q ss_pred CCeeEEEcccHHHHHHHHHHHH---cCCcEEEEEeCC
Q 011787 214 PKKLVVIGAGYIGLEMGSVWAR---LGSEVTVVEFAA 247 (477)
Q Consensus 214 ~~~v~IiG~G~~g~e~a~~l~~---~g~~Vtli~~~~ 247 (477)
..+|+|||||..|+-+|..|++ .|.+|+++++.+
T Consensus 25 ~~dVvIVGgG~aGl~aA~~La~~~~~G~~V~liE~~~ 61 (550)
T 2e4g_A 25 IDKILIVGGGTAGWMAASYLGKALQGTADITLLQAPD 61 (550)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTTTSSEEEEEECCC
T ss_pred CCcEEEECCCHHHHHHHHHHHhhcCCCCcEEEEeCCC
Confidence 4689999999999999999999 899999999865
No 416
>2yg5_A Putrescine oxidase; oxidoreductase, flavin; HET: FAD; 1.90A {Rhodococcus erythropolis} PDB: 2yg6_A* 2yg3_A* 2yg4_A* 2yg7_A* 3rha_A*
Probab=92.26 E-value=0.12 Score=50.81 Aligned_cols=35 Identities=26% Similarity=0.502 Sum_probs=32.4
Q ss_pred CeeEEEcccHHHHHHHHHHHHcCCcEEEEEeCCCc
Q 011787 215 KKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADI 249 (477)
Q Consensus 215 ~~v~IiG~G~~g~e~a~~l~~~g~~Vtli~~~~~~ 249 (477)
.+|+|||+|..|+.+|..|++.|.+|+++++++++
T Consensus 6 ~~v~iiG~G~~Gl~aA~~l~~~g~~v~v~E~~~~~ 40 (453)
T 2yg5_A 6 RDVAIVGAGPSGLAAATALRKAGLSVAVIEARDRV 40 (453)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSS
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCcEEEEECCCCC
Confidence 47999999999999999999999999999988765
No 417
>2vvm_A Monoamine oxidase N; FAD, peroxisome, flavoprotein, oxidoreductase, enantioselectivity, directed evolution variant; HET: FAD; 1.85A {Aspergillus niger} PDB: 2vvl_A* 2vvl_G*
Probab=92.25 E-value=0.23 Score=49.32 Aligned_cols=40 Identities=40% Similarity=0.592 Sum_probs=38.1
Q ss_pred CcEEEECCChHHHHHHHHHHHCCCeEEEEecCCCCCceee
Q 011787 44 NDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGALGGTCL 83 (477)
Q Consensus 44 ~dvvIIGgG~AGl~aA~~l~~~g~~V~lie~~~~~GG~~~ 83 (477)
+||+|||||++|++||..|++.|++|+|+|+++.+||.+.
T Consensus 40 ~~v~iiGaG~aGl~aA~~l~~~g~~v~v~E~~~~~GGr~~ 79 (495)
T 2vvm_A 40 WDVIVIGGGYCGLTATRDLTVAGFKTLLLEARDRIGGRSW 79 (495)
T ss_dssp EEEEEECCBHHHHHHHHHHHHTTCCEEEECSSSBSBTTCC
T ss_pred CCEEEECCcHHHHHHHHHHHHCCCCEEEEeCCCCCCCcce
Confidence 8999999999999999999999999999999999999754
No 418
>1vl6_A Malate oxidoreductase; TM0542, NAD-dependent malic enzyme, structural genomics, JCS protein structure initiative, PSI; 2.61A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.3 PDB: 2hae_A*
Probab=92.22 E-value=0.13 Score=48.70 Aligned_cols=34 Identities=29% Similarity=0.501 Sum_probs=31.2
Q ss_pred CCCcEEEECCChHHHHHHHHHHHCCC-eEEEEecC
Q 011787 42 DENDVVVIGGGPGGYVAAIKAAQLGL-KTTCIEKR 75 (477)
Q Consensus 42 ~~~dvvIIGgG~AGl~aA~~l~~~g~-~V~lie~~ 75 (477)
...+|+|+|+|.||..+|..|...|. +|+++|+.
T Consensus 191 ~~~kVVv~GAGaAG~~iAkll~~~G~~~I~v~Dr~ 225 (388)
T 1vl6_A 191 EEVKVVVNGIGAAGYNIVKFLLDLGVKNVVAVDRK 225 (388)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHHTCCEEEEEETT
T ss_pred CCcEEEEECCCHHHHHHHHHHHhCCCCeEEEEECC
Confidence 45799999999999999999999997 79999995
No 419
>3hdq_A UDP-galactopyranose mutase; substrate and inhibitor, isomerase; HET: GDU FAD; 2.36A {Deinococcus radiodurans} PDB: 3hdy_A* 3he3_A* 3mj4_A*
Probab=92.19 E-value=0.13 Score=49.51 Aligned_cols=36 Identities=25% Similarity=0.431 Sum_probs=32.7
Q ss_pred CCeeEEEcccHHHHHHHHHHHHcCCcEEEEEeCCCc
Q 011787 214 PKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADI 249 (477)
Q Consensus 214 ~~~v~IiG~G~~g~e~a~~l~~~g~~Vtli~~~~~~ 249 (477)
..+++|||+|.+|+-+|..|++.|.+|+++++++++
T Consensus 29 ~~dv~IIGaG~aGl~aA~~l~~~g~~v~v~E~~~~~ 64 (397)
T 3hdq_A 29 GFDYLIVGAGFAGSVLAERLASSGQRVLIVDRRPHI 64 (397)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSS
T ss_pred CCCEEEECccHHHHHHHHHHHHCCCceEEEeccCCC
Confidence 357999999999999999999999999999988765
No 420
>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1
Probab=92.19 E-value=0.15 Score=47.42 Aligned_cols=34 Identities=26% Similarity=0.243 Sum_probs=30.2
Q ss_pred CCCcEEEECCChHHHHHHHHHHHCCC--eEEEEecC
Q 011787 42 DENDVVVIGGGPGGYVAAIKAAQLGL--KTTCIEKR 75 (477)
Q Consensus 42 ~~~dvvIIGgG~AGl~aA~~l~~~g~--~V~lie~~ 75 (477)
.+.+|+|||+|..|.+.|..|+..+. ++.++|.+
T Consensus 6 ~~~KI~IiGaG~vG~~~a~~l~~~~~~~ev~L~Di~ 41 (318)
T 1y6j_A 6 SRSKVAIIGAGFVGASAAFTMALRQTANELVLIDVF 41 (318)
T ss_dssp -CCCEEEECCSHHHHHHHHHHHHTTCSSEEEEECCC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCC
Confidence 34789999999999999999999987 89999974
No 421
>4ffl_A PYLC; amino acid, biosynthesis of pyrrolysine, isopeptide bond for ATP-grAsp fold, ligase, ATP-binding, L-lysine and 3R-methyl ornithine; HET: LYS ADP ATP; 1.50A {Methanosarcina barkeri} PDB: 4ffm_A* 4ffn_A* 4ffo_A* 4ffp_A* 4ffr_A*
Probab=92.18 E-value=0.16 Score=48.27 Aligned_cols=34 Identities=24% Similarity=0.464 Sum_probs=31.3
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCeEEEEecCC
Q 011787 43 ENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRG 76 (477)
Q Consensus 43 ~~dvvIIGgG~AGl~aA~~l~~~g~~V~lie~~~ 76 (477)
+++|+|||||..|..++..+++.|++|+++|.++
T Consensus 1 MK~I~ilGgg~~g~~~~~~Ak~~G~~vv~vd~~~ 34 (363)
T 4ffl_A 1 MKTICLVGGKLQGFEAAYLSKKAGMKVVLVDKNP 34 (363)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCT
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCC
Confidence 4679999999999999999999999999999864
No 422
>2gag_B Heterotetrameric sarcosine oxidase beta-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_B* 1x31_B* 1vrq_B* 3ad7_B* 3ad8_B* 3ad9_B* 3ada_B*
Probab=92.14 E-value=0.11 Score=50.11 Aligned_cols=33 Identities=27% Similarity=0.411 Sum_probs=30.9
Q ss_pred CeeEEEcccHHHHHHHHHHHH-cC-CcEEEEEeCC
Q 011787 215 KKLVVIGAGYIGLEMGSVWAR-LG-SEVTVVEFAA 247 (477)
Q Consensus 215 ~~v~IiG~G~~g~e~a~~l~~-~g-~~Vtli~~~~ 247 (477)
.+|+|||+|..|+.+|..|++ .| .+|+++++.+
T Consensus 22 ~dVvIIG~G~~Gl~~A~~La~~~G~~~V~vlE~~~ 56 (405)
T 2gag_B 22 YDAIIVGGGGHGLATAYFLAKNHGITNVAVLEKGW 56 (405)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHCCCCEEEECSSS
T ss_pred CCEEEECcCHHHHHHHHHHHHhcCCCcEEEEeCCC
Confidence 479999999999999999999 99 9999999876
No 423
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=92.12 E-value=0.073 Score=52.39 Aligned_cols=34 Identities=21% Similarity=0.311 Sum_probs=31.4
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCeEEEEecCC
Q 011787 43 ENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRG 76 (477)
Q Consensus 43 ~~dvvIIGgG~AGl~aA~~l~~~g~~V~lie~~~ 76 (477)
.++|+|+|+|-.|.+.|..|.+.|++|++||+++
T Consensus 3 ~M~iiI~G~G~vG~~la~~L~~~~~~v~vId~d~ 36 (461)
T 4g65_A 3 AMKIIILGAGQVGGTLAENLVGENNDITIVDKDG 36 (461)
T ss_dssp CEEEEEECCSHHHHHHHHHTCSTTEEEEEEESCH
T ss_pred cCEEEEECCCHHHHHHHHHHHHCCCCEEEEECCH
Confidence 4689999999999999999999999999999854
No 424
>3dje_A Fructosyl amine: oxygen oxidoreductase; fructosyl-amino acid, amadoriase, deglycation, fructosamine oxidase; HET: MSE FAD FSA EPE; 1.60A {Aspergillus fumigatus} PDB: 3djd_A*
Probab=92.10 E-value=0.14 Score=50.09 Aligned_cols=35 Identities=31% Similarity=0.361 Sum_probs=32.2
Q ss_pred CeeEEEcccHHHHHHHHHHHHcCC-cEEEEEeCCCc
Q 011787 215 KKLVVIGAGYIGLEMGSVWARLGS-EVTVVEFAADI 249 (477)
Q Consensus 215 ~~v~IiG~G~~g~e~a~~l~~~g~-~Vtli~~~~~~ 249 (477)
.+|+|||+|..|+-+|..|++.|. +|+++++.+..
T Consensus 7 ~dVvIIGgG~aGlsaA~~La~~G~~~V~vlE~~~~~ 42 (438)
T 3dje_A 7 SSLLIVGAGTWGTSTALHLARRGYTNVTVLDPYPVP 42 (438)
T ss_dssp SCEEEECCSHHHHHHHHHHHHTTCCCEEEEESSCSS
T ss_pred CCEEEECCCHHHHHHHHHHHHcCCCcEEEEeCCCCC
Confidence 479999999999999999999999 99999988754
No 425
>1jnr_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 1.60A {Archaeoglobus fulgidus dsm 4304} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1jnz_A* 2fjb_A* 2fja_A* 2fjd_A* 2fje_A*
Probab=92.07 E-value=0.1 Score=53.91 Aligned_cols=35 Identities=49% Similarity=0.685 Sum_probs=32.3
Q ss_pred CCcEEEECCChHHHHHHHHHH---H-CCCeEEEEecCCC
Q 011787 43 ENDVVVIGGGPGGYVAAIKAA---Q-LGLKTTCIEKRGA 77 (477)
Q Consensus 43 ~~dvvIIGgG~AGl~aA~~l~---~-~g~~V~lie~~~~ 77 (477)
++||||||||+||++||+.|+ + .|.+|+||||...
T Consensus 22 ~~DVvVIG~G~AGl~AAl~aa~~~~~~G~~V~vlEK~~~ 60 (643)
T 1jnr_A 22 ETDILIIGGGFSGCGAAYEAAYWAKLGGLKVTLVEKAAV 60 (643)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHHHTTTTCCEEEECSSCT
T ss_pred cCCEEEECcCHHHHHHHHHHhhhhhhCCCeEEEEeCcCC
Confidence 589999999999999999999 6 7999999999764
No 426
>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A
Probab=92.06 E-value=0.15 Score=47.54 Aligned_cols=33 Identities=21% Similarity=0.228 Sum_probs=30.3
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCC-eEEEEecC
Q 011787 43 ENDVVVIGGGPGGYVAAIKAAQLGL-KTTCIEKR 75 (477)
Q Consensus 43 ~~dvvIIGgG~AGl~aA~~l~~~g~-~V~lie~~ 75 (477)
..+|.|||+|..|.+.|..|++.|+ +|+++|++
T Consensus 4 ~~kI~VIGaG~~G~~ia~~la~~g~~~V~l~D~~ 37 (317)
T 2ewd_A 4 RRKIAVIGSGQIGGNIAYIVGKDNLADVVLFDIA 37 (317)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCEEEEECSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCceEEEEeCC
Confidence 4689999999999999999999998 99999984
No 427
>1sez_A Protoporphyrinogen oxidase, mitochondrial; FAD-binding, para-hydroxy-benzoate-hydroxylase fold (PHBH- fold), monotopic membrane-binding domain; HET: FAD OMN TON; 2.90A {Nicotiana tabacum} SCOP: c.3.1.2 d.16.1.5
Probab=91.92 E-value=0.13 Score=51.26 Aligned_cols=36 Identities=36% Similarity=0.426 Sum_probs=33.4
Q ss_pred CCeeEEEcccHHHHHHHHHHHHcCCcEEEEEeCCCc
Q 011787 214 PKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADI 249 (477)
Q Consensus 214 ~~~v~IiG~G~~g~e~a~~l~~~g~~Vtli~~~~~~ 249 (477)
..+|+|||+|..|+-+|..|++.|.+|+++++++++
T Consensus 13 ~~~v~iiG~G~~Gl~aA~~l~~~g~~v~v~E~~~~~ 48 (504)
T 1sez_A 13 AKRVAVIGAGVSGLAAAYKLKIHGLNVTVFEAEGKA 48 (504)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTSCEEEEECSSSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCcEEEEEeCCCC
Confidence 468999999999999999999999999999998875
No 428
>1v0j_A UDP-galactopyranose mutase; flavoprotein, isomerase; HET: FAD BCN; 2.25A {Mycobacterium tuberculosis}
Probab=91.85 E-value=0.12 Score=49.79 Aligned_cols=35 Identities=31% Similarity=0.480 Sum_probs=32.1
Q ss_pred CeeEEEcccHHHHHHHHHHHHc-CCcEEEEEeCCCc
Q 011787 215 KKLVVIGAGYIGLEMGSVWARL-GSEVTVVEFAADI 249 (477)
Q Consensus 215 ~~v~IiG~G~~g~e~a~~l~~~-g~~Vtli~~~~~~ 249 (477)
.+++|||+|.+|+-+|..|++. |.+|+++++++++
T Consensus 8 ~~v~IiGaG~~Gl~aA~~L~~~~g~~v~v~E~~~~~ 43 (399)
T 1v0j_A 8 FDLFVVGSGFFGLTIAERVATQLDKRVLVLERRPHI 43 (399)
T ss_dssp CSEEEECCSHHHHHHHHHHHHHSCCCEEEECSSSSS
T ss_pred CCEEEECCCHHHHHHHHHHHHhCCCCEEEEeCCCCC
Confidence 4799999999999999999998 9999999988755
No 429
>3g3e_A D-amino-acid oxidase; FAD, flavoprotein, oxidoreductase, PER; HET: FAD G3E; 2.20A {Homo sapiens} PDB: 3cuk_A* 2e48_A* 2e49_A* 2e4a_A* 2e82_A* 2du8_A* 1ve9_A* 1dao_A* 1ddo_A* 1kif_A* 1an9_A* 1evi_A*
Probab=91.82 E-value=0.12 Score=48.89 Aligned_cols=32 Identities=31% Similarity=0.342 Sum_probs=29.8
Q ss_pred eeEEEcccHHHHHHHHHHHHcC------CcEEEEEeCC
Q 011787 216 KLVVIGAGYIGLEMGSVWARLG------SEVTVVEFAA 247 (477)
Q Consensus 216 ~v~IiG~G~~g~e~a~~l~~~g------~~Vtli~~~~ 247 (477)
+|+|||||.+|+-+|..|++.| .+|+++++..
T Consensus 2 dVvIIGgGi~Gls~A~~La~~G~~~~p~~~V~vlE~~~ 39 (351)
T 3g3e_A 2 RVVVIGAGVIGLSTALCIHERYHSVLQPLDIKVYADRF 39 (351)
T ss_dssp EEEEECCSHHHHHHHHHHHHHHTTTSSSCEEEEEESSC
T ss_pred cEEEECCCHHHHHHHHHHHHhccccCCCceEEEEECCC
Confidence 6899999999999999999998 8999999875
No 430
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=91.73 E-value=0.17 Score=47.11 Aligned_cols=31 Identities=23% Similarity=0.328 Sum_probs=29.7
Q ss_pred CcEEEECCChHHHHHHHHHHHCCCeEEEEec
Q 011787 44 NDVVVIGGGPGGYVAAIKAAQLGLKTTCIEK 74 (477)
Q Consensus 44 ~dvvIIGgG~AGl~aA~~l~~~g~~V~lie~ 74 (477)
++|.|||+|.-|.+.|..|++.|.+|+++++
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~g~~V~~~~r 33 (320)
T 3i83_A 3 LNILVIGTGAIGSFYGALLAKTGHCVSVVSR 33 (320)
T ss_dssp CEEEEESCCHHHHHHHHHHHHTTCEEEEECS
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCeEEEEeC
Confidence 5899999999999999999999999999988
No 431
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=91.66 E-value=0.2 Score=46.50 Aligned_cols=35 Identities=23% Similarity=0.260 Sum_probs=31.8
Q ss_pred CCCCcEEEECCChHHHHHHHHHHHCCCeEEEEecC
Q 011787 41 SDENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKR 75 (477)
Q Consensus 41 ~~~~dvvIIGgG~AGl~aA~~l~~~g~~V~lie~~ 75 (477)
..+++|.|||.|.-|...|..|++.|++|+++|++
T Consensus 19 ~~m~~I~iIG~G~mG~~~A~~l~~~G~~V~~~dr~ 53 (310)
T 3doj_A 19 SHMMEVGFLGLGIMGKAMSMNLLKNGFKVTVWNRT 53 (310)
T ss_dssp CCSCEEEEECCSHHHHHHHHHHHHTTCEEEEECSS
T ss_pred ccCCEEEEECccHHHHHHHHHHHHCCCeEEEEeCC
Confidence 34578999999999999999999999999999984
No 432
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=91.65 E-value=0.18 Score=48.52 Aligned_cols=33 Identities=33% Similarity=0.469 Sum_probs=30.6
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCeEEEEecC
Q 011787 43 ENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKR 75 (477)
Q Consensus 43 ~~dvvIIGgG~AGl~aA~~l~~~g~~V~lie~~ 75 (477)
..+|+|||+|.+|+.+|..|+..|.+|+++|++
T Consensus 172 g~~V~ViGaG~iG~~aa~~a~~~Ga~V~v~D~~ 204 (401)
T 1x13_A 172 PAKVMVIGAGVAGLAAIGAANSLGAIVRAFDTR 204 (401)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSC
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCC
Confidence 468999999999999999999999999999984
No 433
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=91.63 E-value=0.15 Score=53.12 Aligned_cols=36 Identities=22% Similarity=0.255 Sum_probs=32.5
Q ss_pred CCeeEEEcccHHHHHHHHHHHHcCCcEEEEEeCCCc
Q 011787 214 PKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADI 249 (477)
Q Consensus 214 ~~~v~IiG~G~~g~e~a~~l~~~g~~Vtli~~~~~~ 249 (477)
..+|+|||||..|+-+|..|++.|.+|+++++.+.+
T Consensus 264 ~~DVvIIGgGiaGlsaA~~La~~G~~V~vlEk~~~~ 299 (689)
T 3pvc_A 264 CDDIAIIGGGIVSALTALALQRRGAVVTLYCADAQP 299 (689)
T ss_dssp CSSEEEECCSHHHHHHHHHHHTTTCCEEEEESSSST
T ss_pred CCCEEEECCcHHHHHHHHHHHHCCCcEEEEeCCCcc
Confidence 368999999999999999999999999999987543
No 434
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=91.57 E-value=0.18 Score=46.75 Aligned_cols=31 Identities=26% Similarity=0.308 Sum_probs=29.6
Q ss_pred CcEEEECCChHHHHHHHHHHHCCCeEEEEec
Q 011787 44 NDVVVIGGGPGGYVAAIKAAQLGLKTTCIEK 74 (477)
Q Consensus 44 ~dvvIIGgG~AGl~aA~~l~~~g~~V~lie~ 74 (477)
++|.|||+|..|...|..|.+.|++|+++++
T Consensus 4 m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~r 34 (316)
T 2ew2_A 4 MKIAIAGAGAMGSRLGIMLHQGGNDVTLIDQ 34 (316)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECS
T ss_pred CeEEEECcCHHHHHHHHHHHhCCCcEEEEEC
Confidence 4799999999999999999999999999988
No 435
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=91.56 E-value=0.2 Score=47.95 Aligned_cols=33 Identities=30% Similarity=0.398 Sum_probs=30.6
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCeEEEEecC
Q 011787 43 ENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKR 75 (477)
Q Consensus 43 ~~dvvIIGgG~AGl~aA~~l~~~g~~V~lie~~ 75 (477)
..+|+|||+|.+|+.++..|+..|.+|+++|+.
T Consensus 172 g~~V~ViGaG~iG~~aa~~a~~~Ga~V~~~d~~ 204 (384)
T 1l7d_A 172 PARVLVFGVGVAGLQAIATAKRLGAVVMATDVR 204 (384)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSC
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 468999999999999999999999999999984
No 436
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=91.54 E-value=0.16 Score=52.87 Aligned_cols=35 Identities=20% Similarity=0.225 Sum_probs=32.1
Q ss_pred CeeEEEcccHHHHHHHHHHHHcCCcEEEEEeCCCc
Q 011787 215 KKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADI 249 (477)
Q Consensus 215 ~~v~IiG~G~~g~e~a~~l~~~g~~Vtli~~~~~~ 249 (477)
.+|+|||||..|+-+|..|++.|.+|+++++.+.+
T Consensus 273 ~DVvIIGgGiaGlsaA~~La~~G~~V~vlEk~~~~ 307 (676)
T 3ps9_A 273 REAAIIGGGIASALLSLALLRRGWQVTLYCADEAP 307 (676)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSSS
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCcc
Confidence 68999999999999999999999999999986543
No 437
>3e1t_A Halogenase; flavoprotein; HET: FAD; 2.05A {Chondromyces crocatus}
Probab=91.54 E-value=0.14 Score=51.34 Aligned_cols=33 Identities=36% Similarity=0.395 Sum_probs=31.2
Q ss_pred CeeEEEcccHHHHHHHHHHHHcCCcEEEEEeCC
Q 011787 215 KKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAA 247 (477)
Q Consensus 215 ~~v~IiG~G~~g~e~a~~l~~~g~~Vtli~~~~ 247 (477)
.+|+|||||+.|+-+|..|++.|.+|+++++.+
T Consensus 8 ~dVvIVGgG~aGl~aA~~La~~G~~V~liE~~~ 40 (512)
T 3e1t_A 8 FDLIVIGGGPGGSTLASFVAMRGHRVLLLEREA 40 (512)
T ss_dssp EEEEEECCSHHHHHHHHHHHTTTCCEEEECSSC
T ss_pred CCEEEECcCHHHHHHHHHHHhCCCCEEEEccCC
Confidence 479999999999999999999999999999886
No 438
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=91.54 E-value=0.22 Score=43.11 Aligned_cols=34 Identities=15% Similarity=0.216 Sum_probs=30.8
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCeEEEEecCC
Q 011787 43 ENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRG 76 (477)
Q Consensus 43 ~~dvvIIGgG~AGl~aA~~l~~~g~~V~lie~~~ 76 (477)
.++|.|||+|..|.+.|..|.+.|.+|++++++.
T Consensus 19 ~~~I~iiG~G~mG~~la~~l~~~g~~V~~~~~~~ 52 (209)
T 2raf_A 19 GMEITIFGKGNMGQAIGHNFEIAGHEVTYYGSKD 52 (209)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTCEEEEECTTC
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCH
Confidence 3579999999999999999999999999999854
No 439
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=91.50 E-value=0.19 Score=47.57 Aligned_cols=37 Identities=14% Similarity=0.039 Sum_probs=30.9
Q ss_pred CCCCCCCcEEEECCChHHHHHHHHHHHCCCeEEEEec
Q 011787 38 ASASDENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEK 74 (477)
Q Consensus 38 ~~~~~~~dvvIIGgG~AGl~aA~~l~~~g~~V~lie~ 74 (477)
+.|+.+++|.|||.|.-|...|..|.+.|++|+++|+
T Consensus 17 ~~Mm~~mkIgiIGlG~mG~~~A~~L~~~G~~V~v~dr 53 (358)
T 4e21_A 17 NLYFQSMQIGMIGLGRMGADMVRRLRKGGHECVVYDL 53 (358)
T ss_dssp -----CCEEEEECCSHHHHHHHHHHHHTTCEEEEECS
T ss_pred hhhhcCCEEEEECchHHHHHHHHHHHhCCCEEEEEeC
Confidence 3455667999999999999999999999999999998
No 440
>3lov_A Protoporphyrinogen oxidase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: FAD; 2.06A {Exiguobacterium sibiricum}
Probab=91.49 E-value=0.15 Score=50.34 Aligned_cols=35 Identities=29% Similarity=0.442 Sum_probs=32.0
Q ss_pred CeeEEEcccHHHHHHHHHHHHcC--CcEEEEEeCCCc
Q 011787 215 KKLVVIGAGYIGLEMGSVWARLG--SEVTVVEFAADI 249 (477)
Q Consensus 215 ~~v~IiG~G~~g~e~a~~l~~~g--~~Vtli~~~~~~ 249 (477)
.+|+|||+|.+|+-+|..|++.| .+|+++++++++
T Consensus 5 ~~v~IiGaG~~Gl~~A~~L~~~g~~~~v~v~E~~~~~ 41 (475)
T 3lov_A 5 KRLVIVGGGITGLAAAYYAERAFPDLNITLLEAGERL 41 (475)
T ss_dssp CEEEEECCBHHHHHHHHHHHHHCTTSEEEEECSSSSS
T ss_pred ccEEEECCCHHHHHHHHHHHHhCCCCCEEEEECCCCC
Confidence 57999999999999999999999 999999987654
No 441
>1i8t_A UDP-galactopyranose mutase; rossman fold, FAD, contractase, isomerase; HET: FAD; 2.40A {Escherichia coli} SCOP: c.4.1.3 d.16.1.7
Probab=91.34 E-value=0.15 Score=48.52 Aligned_cols=34 Identities=24% Similarity=0.461 Sum_probs=31.3
Q ss_pred eeEEEcccHHHHHHHHHHHHcCCcEEEEEeCCCc
Q 011787 216 KLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADI 249 (477)
Q Consensus 216 ~v~IiG~G~~g~e~a~~l~~~g~~Vtli~~~~~~ 249 (477)
+++|||+|..|+-+|..|++.|.+|+++++++++
T Consensus 3 ~v~iiG~G~~Gl~~A~~l~~~g~~v~v~E~~~~~ 36 (367)
T 1i8t_A 3 DYIIVGSGLFGAVCANELKKLNKKVLVIEKRNHI 36 (367)
T ss_dssp EEEEECCSHHHHHHHHHHGGGTCCEEEECSSSSS
T ss_pred CEEEECcCHHHHHHHHHHHhCCCcEEEEecCCCC
Confidence 6899999999999999999999999999987654
No 442
>2qcu_A Aerobic glycerol-3-phosphate dehydrogenase; glycerol-3-phoshate dehydrogenase, oxidoreductase; HET: BOG FAD TAM; 1.75A {Escherichia coli} PDB: 2r45_A* 2r46_A* 2r4e_A* 2r4j_A*
Probab=91.25 E-value=0.15 Score=50.87 Aligned_cols=33 Identities=33% Similarity=0.413 Sum_probs=30.7
Q ss_pred CeeEEEcccHHHHHHHHHHHHcCCcEEEEEeCC
Q 011787 215 KKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAA 247 (477)
Q Consensus 215 ~~v~IiG~G~~g~e~a~~l~~~g~~Vtli~~~~ 247 (477)
..|+|||||.+|+.+|..|++.|.+|+++++.+
T Consensus 4 ~DVvIIGgGi~G~~~A~~La~~G~~V~llE~~~ 36 (501)
T 2qcu_A 4 KDLIVIGGGINGAGIAADAAGRGLSVLMLEAQD 36 (501)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred CCEEEECcCHHHHHHHHHHHhCCCCEEEEECCC
Confidence 369999999999999999999999999999865
No 443
>3vtf_A UDP-glucose 6-dehydrogenase; two discrete alpha/beta domains, oxidoreducta; HET: UPG; 2.00A {Pyrobaculum islandicum}
Probab=91.23 E-value=0.22 Score=48.32 Aligned_cols=37 Identities=27% Similarity=0.285 Sum_probs=32.8
Q ss_pred CCCCCCcEEEECCChHHHHHHHHHHHCCCeEEEEecC
Q 011787 39 SASDENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKR 75 (477)
Q Consensus 39 ~~~~~~dvvIIGgG~AGl~aA~~l~~~g~~V~lie~~ 75 (477)
..+.+.+|.|||.|..|+..|..+++.|++|+.+|-+
T Consensus 17 ~~~~m~~IaViGlGYVGLp~A~~~A~~G~~V~g~Did 53 (444)
T 3vtf_A 17 RGSHMASLSVLGLGYVGVVHAVGFALLGHRVVGYDVN 53 (444)
T ss_dssp TTCCCCEEEEECCSHHHHHHHHHHHHHTCEEEEECSC
T ss_pred CCCCCCEEEEEccCHHHHHHHHHHHhCCCcEEEEECC
Confidence 3345678999999999999999999999999999974
No 444
>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*
Probab=91.21 E-value=0.21 Score=46.41 Aligned_cols=31 Identities=32% Similarity=0.423 Sum_probs=29.5
Q ss_pred CcEEEECCChHHHHHHHHHHHCCC--eEEEEec
Q 011787 44 NDVVVIGGGPGGYVAAIKAAQLGL--KTTCIEK 74 (477)
Q Consensus 44 ~dvvIIGgG~AGl~aA~~l~~~g~--~V~lie~ 74 (477)
++|+|||+|..|.+.|..|.+.|. +|+++|+
T Consensus 8 mkI~IiGaG~vG~~~a~~l~~~g~~~~V~l~d~ 40 (319)
T 1lld_A 8 TKLAVIGAGAVGSTLAFAAAQRGIAREIVLEDI 40 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEECS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeC
Confidence 589999999999999999999998 9999998
No 445
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=91.19 E-value=0.27 Score=40.08 Aligned_cols=33 Identities=18% Similarity=0.264 Sum_probs=30.4
Q ss_pred CCeeEEEcccHHHHHHHHHHHHcCCcEEEEEeC
Q 011787 214 PKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFA 246 (477)
Q Consensus 214 ~~~v~IiG~G~~g~e~a~~l~~~g~~Vtli~~~ 246 (477)
.++++|+|+|..|..++..|.+.|.+|+++.++
T Consensus 3 ~~~vlI~G~G~vG~~la~~L~~~g~~V~vid~~ 35 (153)
T 1id1_A 3 KDHFIVCGHSILAINTILQLNQRGQNVTVISNL 35 (153)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHTTCCEEEEECC
T ss_pred CCcEEEECCCHHHHHHHHHHHHCCCCEEEEECC
Confidence 467999999999999999999999999999875
No 446
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=91.18 E-value=0.25 Score=46.20 Aligned_cols=33 Identities=18% Similarity=0.191 Sum_probs=29.6
Q ss_pred CCcEEEECCChHHHH-HHHHHHHCCCeEEEEecC
Q 011787 43 ENDVVVIGGGPGGYV-AAIKAAQLGLKTTCIEKR 75 (477)
Q Consensus 43 ~~dvvIIGgG~AGl~-aA~~l~~~g~~V~lie~~ 75 (477)
+++|.|||.|.+|++ +|..|.++|++|++.|++
T Consensus 4 ~~~i~~iGiGg~Gms~~A~~L~~~G~~V~~~D~~ 37 (326)
T 3eag_A 4 MKHIHIIGIGGTFMGGLAAIAKEAGFEVSGCDAK 37 (326)
T ss_dssp CCEEEEESCCSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred CcEEEEEEECHHHHHHHHHHHHhCCCEEEEEcCC
Confidence 368999999999997 788889999999999984
No 447
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=91.14 E-value=0.23 Score=45.28 Aligned_cols=32 Identities=16% Similarity=0.162 Sum_probs=29.8
Q ss_pred cEEEECCChHHHHHHHHHHHCCCeEEEEecCC
Q 011787 45 DVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRG 76 (477)
Q Consensus 45 dvvIIGgG~AGl~aA~~l~~~g~~V~lie~~~ 76 (477)
+|.|||+|..|...|..|.+.|++|++++++.
T Consensus 2 ~i~iiG~G~~G~~~a~~l~~~g~~V~~~~r~~ 33 (291)
T 1ks9_A 2 KITVLGCGALGQLWLTALCKQGHEVQGWLRVP 33 (291)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSSC
T ss_pred eEEEECcCHHHHHHHHHHHhCCCCEEEEEcCc
Confidence 69999999999999999999999999999853
No 448
>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*
Probab=91.14 E-value=0.25 Score=45.92 Aligned_cols=34 Identities=24% Similarity=0.218 Sum_probs=30.9
Q ss_pred CCCcEEEECCChHHHHHHHHHHHCCC-eEEEEecC
Q 011787 42 DENDVVVIGGGPGGYVAAIKAAQLGL-KTTCIEKR 75 (477)
Q Consensus 42 ~~~dvvIIGgG~AGl~aA~~l~~~g~-~V~lie~~ 75 (477)
...+|.|||+|..|.+.|..|+..++ +++|+|.+
T Consensus 6 ~~~kI~viGaG~vG~~~a~~l~~~~~~~v~L~Di~ 40 (324)
T 3gvi_A 6 ARNKIALIGSGMIGGTLAHLAGLKELGDVVLFDIA 40 (324)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSS
T ss_pred cCCEEEEECCCHHHHHHHHHHHhCCCCeEEEEeCC
Confidence 45689999999999999999999988 99999984
No 449
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=91.13 E-value=0.19 Score=46.58 Aligned_cols=31 Identities=13% Similarity=0.222 Sum_probs=29.1
Q ss_pred CcEEEECCChHHHHHHHHHHHCCCeEEEEec
Q 011787 44 NDVVVIGGGPGGYVAAIKAAQLGLKTTCIEK 74 (477)
Q Consensus 44 ~dvvIIGgG~AGl~aA~~l~~~g~~V~lie~ 74 (477)
++|.|||+|.-|.+.|..|++.|.+|+++++
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~g~~V~~~~r 33 (312)
T 3hn2_A 3 LRIAIVGAGALGLYYGALLQRSGEDVHFLLR 33 (312)
T ss_dssp -CEEEECCSTTHHHHHHHHHHTSCCEEEECS
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCeEEEEEc
Confidence 5799999999999999999999999999988
No 450
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=91.08 E-value=0.18 Score=46.35 Aligned_cols=35 Identities=20% Similarity=0.102 Sum_probs=31.5
Q ss_pred CCCcEEEECCChHHHHHHHHHHHCCCeEEEEecCC
Q 011787 42 DENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRG 76 (477)
Q Consensus 42 ~~~dvvIIGgG~AGl~aA~~l~~~g~~V~lie~~~ 76 (477)
.+.+|.|||.|.-|...|..|++.|++|+++|+++
T Consensus 14 ~~~~I~vIG~G~mG~~~A~~l~~~G~~V~~~dr~~ 48 (296)
T 3qha_A 14 EQLKLGYIGLGNMGAPMATRMTEWPGGVTVYDIRI 48 (296)
T ss_dssp -CCCEEEECCSTTHHHHHHHHTTSTTCEEEECSST
T ss_pred CCCeEEEECcCHHHHHHHHHHHHCCCeEEEEeCCH
Confidence 35689999999999999999999999999999853
No 451
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=91.00 E-value=0.18 Score=45.01 Aligned_cols=32 Identities=25% Similarity=0.330 Sum_probs=29.8
Q ss_pred CcEEEECCChHHHHHHHHHHHCCC-eEEEEecC
Q 011787 44 NDVVVIGGGPGGYVAAIKAAQLGL-KTTCIEKR 75 (477)
Q Consensus 44 ~dvvIIGgG~AGl~aA~~l~~~g~-~V~lie~~ 75 (477)
.+|+|||+|..|..+|..|++.|. +++|+|++
T Consensus 32 ~~VlVvG~Gg~G~~va~~La~~Gv~~i~lvD~d 64 (249)
T 1jw9_B 32 SRVLIVGLGGLGCAASQYLASAGVGNLTLLDFD 64 (249)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCSEEEEECCC
T ss_pred CeEEEEeeCHHHHHHHHHHHHcCCCeEEEEcCC
Confidence 589999999999999999999996 89999984
No 452
>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}
Probab=90.95 E-value=0.28 Score=45.53 Aligned_cols=35 Identities=14% Similarity=0.198 Sum_probs=31.4
Q ss_pred CCCCcEEEECCChHHHHHHHHHHHCCCeEEEEecC
Q 011787 41 SDENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKR 75 (477)
Q Consensus 41 ~~~~dvvIIGgG~AGl~aA~~l~~~g~~V~lie~~ 75 (477)
+...+|.|||+|.-|...|..|.+.|++|+++|++
T Consensus 28 ~~~~~I~iIG~G~mG~~~a~~l~~~g~~V~~~~~~ 62 (316)
T 2uyy_A 28 PTDKKIGFLGLGLMGSGIVSNLLKMGHTVTVWNRT 62 (316)
T ss_dssp CCSSCEEEECCSHHHHHHHHHHHHTTCCEEEECSS
T ss_pred CCCCeEEEEcccHHHHHHHHHHHhCCCEEEEEeCC
Confidence 33468999999999999999999999999999884
No 453
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=90.91 E-value=0.25 Score=43.54 Aligned_cols=34 Identities=15% Similarity=0.206 Sum_probs=30.6
Q ss_pred CCCcEEEECC-ChHHHHHHHHHHHCCCeEEEEecC
Q 011787 42 DENDVVVIGG-GPGGYVAAIKAAQLGLKTTCIEKR 75 (477)
Q Consensus 42 ~~~dvvIIGg-G~AGl~aA~~l~~~g~~V~lie~~ 75 (477)
..+.|+|.|| |.-|...+..|.+.|++|++++++
T Consensus 20 ~~~~ilVtGatG~iG~~l~~~L~~~G~~V~~~~R~ 54 (236)
T 3e8x_A 20 QGMRVLVVGANGKVARYLLSELKNKGHEPVAMVRN 54 (236)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred CCCeEEEECCCChHHHHHHHHHHhCCCeEEEEECC
Confidence 4568999998 999999999999999999999983
No 454
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=90.91 E-value=0.22 Score=46.16 Aligned_cols=32 Identities=25% Similarity=0.351 Sum_probs=30.1
Q ss_pred CcEEEECCChHHHHHHHHHHHCCCeEEEEecC
Q 011787 44 NDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKR 75 (477)
Q Consensus 44 ~dvvIIGgG~AGl~aA~~l~~~g~~V~lie~~ 75 (477)
.+|.|||+|.-|..-|..++..|++|+|+|.+
T Consensus 7 ~~VaViGaG~MG~giA~~~a~~G~~V~l~D~~ 38 (319)
T 3ado_A 7 GDVLIVGSGLVGRSWAMLFASGGFRVKLYDIE 38 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCEEEECSC
T ss_pred CeEEEECCcHHHHHHHHHHHhCCCeEEEEECC
Confidence 57999999999999999999999999999983
No 455
>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}
Probab=90.90 E-value=0.21 Score=49.21 Aligned_cols=35 Identities=23% Similarity=0.223 Sum_probs=31.9
Q ss_pred CCcEEEECCChHHHHHHHHHHHC-CC-eEEEEecCCC
Q 011787 43 ENDVVVIGGGPGGYVAAIKAAQL-GL-KTTCIEKRGA 77 (477)
Q Consensus 43 ~~dvvIIGgG~AGl~aA~~l~~~-g~-~V~lie~~~~ 77 (477)
.++|.|||.|.-|+..|..|++. |+ +|+++|+++.
T Consensus 18 ~mkIaVIGlG~mG~~lA~~la~~~G~~~V~~~D~~~~ 54 (478)
T 3g79_A 18 IKKIGVLGMGYVGIPAAVLFADAPCFEKVLGFQRNSK 54 (478)
T ss_dssp CCEEEEECCSTTHHHHHHHHHHSTTCCEEEEECCCCT
T ss_pred CCEEEEECcCHHHHHHHHHHHHhCCCCeEEEEECChh
Confidence 46899999999999999999999 99 9999998643
No 456
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=90.89 E-value=0.23 Score=47.19 Aligned_cols=31 Identities=35% Similarity=0.488 Sum_probs=29.7
Q ss_pred CcEEEECCChHHHHHHHHHHHCCCeEEEEec
Q 011787 44 NDVVVIGGGPGGYVAAIKAAQLGLKTTCIEK 74 (477)
Q Consensus 44 ~dvvIIGgG~AGl~aA~~l~~~g~~V~lie~ 74 (477)
.+|+|+|+|.+|..++..|+..|.+|+++|+
T Consensus 168 ~~VlViGaGgvG~~aa~~a~~~Ga~V~v~dr 198 (361)
T 1pjc_A 168 GKVVILGGGVVGTEAAKMAVGLGAQVQIFDI 198 (361)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEES
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCEEEEEeC
Confidence 6899999999999999999999999999998
No 457
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=90.85 E-value=0.21 Score=40.01 Aligned_cols=33 Identities=21% Similarity=0.302 Sum_probs=30.2
Q ss_pred CCeeEEEcccHHHHHHHHHHHHcCCcEEEEEeC
Q 011787 214 PKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFA 246 (477)
Q Consensus 214 ~~~v~IiG~G~~g~e~a~~l~~~g~~Vtli~~~ 246 (477)
.++++|+|+|..|..++..|.+.|.+|++++++
T Consensus 6 ~~~v~I~G~G~iG~~la~~L~~~g~~V~~id~~ 38 (141)
T 3llv_A 6 RYEYIVIGSEAAGVGLVRELTAAGKKVLAVDKS 38 (141)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEESC
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCeEEEEECC
Confidence 367999999999999999999999999999864
No 458
>2rgh_A Alpha-glycerophosphate oxidase; flavoprotein oxidase, oxidoreductase; HET: FAD; 2.30A {Streptococcus SP} PDB: 2rgo_A*
Probab=90.66 E-value=0.18 Score=51.15 Aligned_cols=34 Identities=24% Similarity=0.374 Sum_probs=31.5
Q ss_pred CCeeEEEcccHHHHHHHHHHHHcCCcEEEEEeCC
Q 011787 214 PKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAA 247 (477)
Q Consensus 214 ~~~v~IiG~G~~g~e~a~~l~~~g~~Vtli~~~~ 247 (477)
...|+|||||.+|+-+|..|++.|.+|+++++.+
T Consensus 32 ~~DVvVIGgGi~G~~~A~~La~rG~~V~LlE~~~ 65 (571)
T 2rgh_A 32 ELDLLIIGGGITGAGVAVQAAASGIKTGLIEMQD 65 (571)
T ss_dssp CBSEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCcEEEEeCCC
Confidence 4579999999999999999999999999999875
No 459
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=90.61 E-value=0.27 Score=45.42 Aligned_cols=33 Identities=27% Similarity=0.254 Sum_probs=30.6
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCeEEEEecC
Q 011787 43 ENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKR 75 (477)
Q Consensus 43 ~~dvvIIGgG~AGl~aA~~l~~~g~~V~lie~~ 75 (477)
+++|.|||.|.-|...|..|.+.|++|+++|++
T Consensus 7 ~~~I~iIG~G~mG~~~a~~l~~~G~~V~~~dr~ 39 (303)
T 3g0o_A 7 DFHVGIVGLGSMGMGAARSCLRAGLSTWGADLN 39 (303)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSC
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCeEEEEECC
Confidence 468999999999999999999999999999983
No 460
>2z3y_A Lysine-specific histone demethylase 1; chromatin, nucleosome, transcription, LSD1, alternative splicing, chromatin regulator, coiled coil; HET: F2N; 2.25A {Homo sapiens} SCOP: a.4.1.18 c.3.1.2 d.16.1.5 PDB: 2ejr_A* 2z5u_A* 3abt_A* 3abu_A* 2y48_A* 2v1d_A* 2h94_A* 2iw5_A* 2uxn_A* 2uxx_A* 2hko_A* 2dw4_A* 2x0l_A* 2l3d_A
Probab=90.50 E-value=0.26 Score=51.04 Aligned_cols=36 Identities=28% Similarity=0.473 Sum_probs=32.8
Q ss_pred CCCeeEEEcccHHHHHHHHHHHHcCCcEEEEEeCCC
Q 011787 213 VPKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAAD 248 (477)
Q Consensus 213 ~~~~v~IiG~G~~g~e~a~~l~~~g~~Vtli~~~~~ 248 (477)
..++|+|||+|+.|+.+|..|.+.|.+|+++++.++
T Consensus 106 ~~~~v~viG~G~~gl~~a~~l~~~g~~v~~~e~~~~ 141 (662)
T 2z3y_A 106 KTGKVIIIGSGVSGLAAARQLQSFGMDVTLLEARDR 141 (662)
T ss_dssp CCCEEEEECCBHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred CCCeEEEECcCHHHHHHHHHHHHCCCeEEEEecCCC
Confidence 357899999999999999999999999999998764
No 461
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=90.45 E-value=0.26 Score=48.71 Aligned_cols=33 Identities=24% Similarity=0.508 Sum_probs=31.0
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCeEEEEecC
Q 011787 43 ENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKR 75 (477)
Q Consensus 43 ~~dvvIIGgG~AGl~aA~~l~~~g~~V~lie~~ 75 (477)
.++|.|||.|..|+..|..|++.|++|+++|++
T Consensus 8 ~~~I~VIG~G~vG~~lA~~la~~G~~V~~~d~~ 40 (478)
T 2y0c_A 8 SMNLTIIGSGSVGLVTGACLADIGHDVFCLDVD 40 (478)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSC
T ss_pred CceEEEECcCHHHHHHHHHHHhCCCEEEEEECC
Confidence 478999999999999999999999999999984
No 462
>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}
Probab=90.44 E-value=0.32 Score=45.41 Aligned_cols=32 Identities=22% Similarity=0.287 Sum_probs=29.9
Q ss_pred CcEEEECCChHHHHHHHHHHHCCC-eEEEEecC
Q 011787 44 NDVVVIGGGPGGYVAAIKAAQLGL-KTTCIEKR 75 (477)
Q Consensus 44 ~dvvIIGgG~AGl~aA~~l~~~g~-~V~lie~~ 75 (477)
.+|.|||+|..|.+.|..|+..|+ +|+++|.+
T Consensus 15 ~kI~ViGaG~vG~~iA~~la~~g~~~V~L~Di~ 47 (328)
T 2hjr_A 15 KKISIIGAGQIGSTIALLLGQKDLGDVYMFDII 47 (328)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCEEEEECSS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCeEEEEECC
Confidence 589999999999999999999998 99999984
No 463
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=90.44 E-value=0.12 Score=41.64 Aligned_cols=32 Identities=19% Similarity=0.151 Sum_probs=29.4
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCeEEEEec
Q 011787 43 ENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEK 74 (477)
Q Consensus 43 ~~dvvIIGgG~AGl~aA~~l~~~g~~V~lie~ 74 (477)
..+++|||+|..|...|..|.+.|.+|+++++
T Consensus 21 ~~~v~iiG~G~iG~~~a~~l~~~g~~v~v~~r 52 (144)
T 3oj0_A 21 GNKILLVGNGMLASEIAPYFSYPQYKVTVAGR 52 (144)
T ss_dssp CCEEEEECCSHHHHHHGGGCCTTTCEEEEEES
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEEcC
Confidence 36799999999999999999999999999988
No 464
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=90.33 E-value=0.27 Score=45.70 Aligned_cols=33 Identities=24% Similarity=0.341 Sum_probs=30.3
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCeEEEEecC
Q 011787 43 ENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKR 75 (477)
Q Consensus 43 ~~dvvIIGgG~AGl~aA~~l~~~g~~V~lie~~ 75 (477)
..+|.|||+|.-|.+.|..|++.|++|+++|++
T Consensus 6 ~~kI~vIGaG~MG~~iA~~la~~G~~V~l~d~~ 38 (319)
T 2dpo_A 6 AGDVLIVGSGLVGRSWAMLFASGGFRVKLYDIE 38 (319)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTCCEEEECSC
T ss_pred CceEEEEeeCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 467999999999999999999999999999983
No 465
>3p1w_A Rabgdi protein; GDI RAB, malaria, structural genomics consortium, SGC, trans PF10_0345, protein transport; 1.85A {Plasmodium falciparum 3D7}
Probab=90.32 E-value=0.43 Score=46.92 Aligned_cols=46 Identities=17% Similarity=0.353 Sum_probs=41.9
Q ss_pred CCCCCcEEEECCChHHHHHHHHHHHCCCeEEEEecCCCCCceeecc
Q 011787 40 ASDENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGALGGTCLNV 85 (477)
Q Consensus 40 ~~~~~dvvIIGgG~AGl~aA~~l~~~g~~V~lie~~~~~GG~~~~~ 85 (477)
|+..+||+|||+|.+|+++|..|++.|++|+++|+++.+||.+...
T Consensus 17 ~~~~~dv~iiG~G~~g~~~a~~l~~~g~~v~~~e~~~~~Gg~~~s~ 62 (475)
T 3p1w_A 17 QGEHYDVIILGTGLKECILSGLLSHYGKKILVLDRNPYYGGETASL 62 (475)
T ss_dssp CCCEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCGGGCEE
T ss_pred ccccCCEEEECCCHHHHHHHHHHHHCCCcEEEEeccCCCCCCcccc
Confidence 5567999999999999999999999999999999999999987543
No 466
>3axb_A Putative oxidoreductase; dinucleotide-binding fold; HET: FAD; 1.92A {Aeropyrum pernix} PDB: 3vqr_A*
Probab=90.30 E-value=0.18 Score=49.37 Aligned_cols=31 Identities=32% Similarity=0.416 Sum_probs=29.5
Q ss_pred CeeEEEcccHHHHHHHHHHHHcC-CcEEEEEe
Q 011787 215 KKLVVIGAGYIGLEMGSVWARLG-SEVTVVEF 245 (477)
Q Consensus 215 ~~v~IiG~G~~g~e~a~~l~~~g-~~Vtli~~ 245 (477)
.+|+|||+|..|+.+|..|++.| .+|+++++
T Consensus 24 ~dVvIIGgGiaGls~A~~La~~G~~~V~vlE~ 55 (448)
T 3axb_A 24 FDYVVVGAGVVGLAAAYYLKVWSGGSVLVVDA 55 (448)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHCSCEEEEES
T ss_pred CCEEEECcCHHHHHHHHHHHhCCCCcEEEEcc
Confidence 47999999999999999999999 99999998
No 467
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=90.27 E-value=0.3 Score=47.23 Aligned_cols=33 Identities=18% Similarity=0.249 Sum_probs=30.7
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCeEEEEecC
Q 011787 43 ENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKR 75 (477)
Q Consensus 43 ~~dvvIIGgG~AGl~aA~~l~~~g~~V~lie~~ 75 (477)
..+|+|||.|..|...|..|.+.|.+|++||++
T Consensus 4 ~~~viIiG~Gr~G~~va~~L~~~g~~vvvId~d 36 (413)
T 3l9w_A 4 GMRVIIAGFGRFGQITGRLLLSSGVKMVVLDHD 36 (413)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEECC
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCCEEEEECC
Confidence 357999999999999999999999999999985
No 468
>1d5t_A Guanine nucleotide dissociation inhibitor; ultra-high resolution, hydrolase inhibitor; 1.04A {Bos taurus} SCOP: c.3.1.3 d.16.1.6 PDB: 1lv0_A* 1gnd_A
Probab=90.23 E-value=0.29 Score=47.71 Aligned_cols=46 Identities=22% Similarity=0.338 Sum_probs=41.6
Q ss_pred CCCCCcEEEECCChHHHHHHHHHHHCCCeEEEEecCCCCCceeecc
Q 011787 40 ASDENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGALGGTCLNV 85 (477)
Q Consensus 40 ~~~~~dvvIIGgG~AGl~aA~~l~~~g~~V~lie~~~~~GG~~~~~ 85 (477)
|..++||+|||+|++|+++|..|++.|++|+|+|+++.+||.|...
T Consensus 3 ~~~~~~v~iiG~G~~gl~~a~~l~~~g~~v~~~e~~~~~gg~~~s~ 48 (433)
T 1d5t_A 3 MDEEYDVIVLGTGLTECILSGIMSVNGKKVLHMDRNPYYGGESSSI 48 (433)
T ss_dssp CCSBCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTTSCEE
T ss_pred CCCcCCEEEECcCHHHHHHHHHHHHCCCcEEEEecCCCcccccccc
Confidence 4456899999999999999999999999999999999999987543
No 469
>2xag_A Lysine-specific histone demethylase 1; amine oxidase, chromatin regulator, histone inhibitor binding, methylation, nucleosome core, oxidoreductase; HET: FAD TCF; 3.10A {Homo sapiens} PDB: 2xaf_A* 2xah_A* 2xaj_A* 2xaq_A* 2xas_A* 2com_A
Probab=90.22 E-value=0.27 Score=52.19 Aligned_cols=36 Identities=28% Similarity=0.517 Sum_probs=32.9
Q ss_pred CCeeEEEcccHHHHHHHHHHHHcCCcEEEEEeCCCc
Q 011787 214 PKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADI 249 (477)
Q Consensus 214 ~~~v~IiG~G~~g~e~a~~l~~~g~~Vtli~~~~~~ 249 (477)
.++|+|||+|+.|+.+|..|.+.|.+|+++++.+++
T Consensus 278 ~~~v~viG~G~aGl~~A~~l~~~g~~v~v~E~~~~~ 313 (852)
T 2xag_A 278 TGKVIIIGSGVSGLAAARQLQSFGMDVTLLEARDRV 313 (852)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCcEEEEEecCcC
Confidence 578999999999999999999999999999987653
No 470
>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*
Probab=90.20 E-value=0.36 Score=43.49 Aligned_cols=33 Identities=15% Similarity=0.389 Sum_probs=30.8
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCeEEEEecC
Q 011787 43 ENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKR 75 (477)
Q Consensus 43 ~~dvvIIGgG~AGl~aA~~l~~~g~~V~lie~~ 75 (477)
..+++|||+|-+|.++|..|.+.|.+|+|+.|.
T Consensus 118 ~k~vlvlGaGGaaraia~~L~~~G~~v~V~nRt 150 (269)
T 3phh_A 118 YQNALILGAGGSAKALACELKKQGLQVSVLNRS 150 (269)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSS
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 578999999999999999999999999999883
No 471
>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}
Probab=90.05 E-value=0.31 Score=45.03 Aligned_cols=31 Identities=26% Similarity=0.307 Sum_probs=29.0
Q ss_pred cEEEECCChHHHHHHHHHHHCCC--eEEEEecC
Q 011787 45 DVVVIGGGPGGYVAAIKAAQLGL--KTTCIEKR 75 (477)
Q Consensus 45 dvvIIGgG~AGl~aA~~l~~~g~--~V~lie~~ 75 (477)
+|+|||+|..|.+.|..|+..|+ +|+++|.+
T Consensus 2 kI~VIGaG~vG~~la~~la~~g~~~eV~L~D~~ 34 (304)
T 2v6b_A 2 KVGVVGTGFVGSTAAFALVLRGSCSELVLVDRD 34 (304)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCSEEEEECSS
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCC
Confidence 69999999999999999999998 99999983
No 472
>3da1_A Glycerol-3-phosphate dehydrogenase; NESG BHR167 Q9KDW6 X-RAY, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.70A {Bacillus halodurans}
Probab=90.05 E-value=0.25 Score=50.06 Aligned_cols=34 Identities=26% Similarity=0.331 Sum_probs=31.6
Q ss_pred CCeeEEEcccHHHHHHHHHHHHcCCcEEEEEeCC
Q 011787 214 PKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAA 247 (477)
Q Consensus 214 ~~~v~IiG~G~~g~e~a~~l~~~g~~Vtli~~~~ 247 (477)
.-.|+|||||..|+-+|..+++.|.+|.++++.+
T Consensus 18 ~~DVvVIGgGi~Gl~~A~~La~~G~~V~LlEk~d 51 (561)
T 3da1_A 18 QLDLLVIGGGITGAGIALDAQVRGIQTGLVEMND 51 (561)
T ss_dssp CEEEEEECCSHHHHHHHHHHHTTTCCEEEEESSS
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCcEEEEECCC
Confidence 4579999999999999999999999999999874
No 473
>4dsg_A UDP-galactopyranose mutase; rossmann fold, flavin adenine dinucleotide, isomerase; HET: FAD UDP; 2.25A {Trypanosoma cruzi} PDB: 4dsh_A*
Probab=90.04 E-value=0.29 Score=48.57 Aligned_cols=36 Identities=31% Similarity=0.407 Sum_probs=32.6
Q ss_pred CCeeEEEcccHHHHHHHHHHHHcC-CcEEEEEeCCCc
Q 011787 214 PKKLVVIGAGYIGLEMGSVWARLG-SEVTVVEFAADI 249 (477)
Q Consensus 214 ~~~v~IiG~G~~g~e~a~~l~~~g-~~Vtli~~~~~~ 249 (477)
..+++|||+|.+|+-+|..|++.| .+|+++++++.+
T Consensus 9 ~~~v~iiG~G~~Gl~~A~~l~~~g~~~v~v~E~~~~~ 45 (484)
T 4dsg_A 9 TPKIVIIGAGPTGLGAAVRLTELGYKNWHLYECNDTP 45 (484)
T ss_dssp SCCEEEECCSHHHHHHHHHHHHTTCCSEEEEESSSSS
T ss_pred CCCEEEECcCHHHHHHHHHHHHcCCCCEEEEeCCCCC
Confidence 467999999999999999999998 799999988765
No 474
>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*
Probab=89.98 E-value=0.28 Score=45.64 Aligned_cols=33 Identities=27% Similarity=0.351 Sum_probs=29.9
Q ss_pred CCCcEEEECCChHHHHHHHHHHHCCC--eEEEEec
Q 011787 42 DENDVVVIGGGPGGYVAAIKAAQLGL--KTTCIEK 74 (477)
Q Consensus 42 ~~~dvvIIGgG~AGl~aA~~l~~~g~--~V~lie~ 74 (477)
...+|.|||+|..|.+.|..|+..|. +++++|.
T Consensus 4 ~~~kI~ViGaG~vG~~~a~~l~~~~~~~~l~l~D~ 38 (326)
T 3pqe_A 4 HVNKVALIGAGFVGSSYAFALINQGITDELVVIDV 38 (326)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECS
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCceEEEEec
Confidence 35689999999999999999999886 8999997
No 475
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=89.98 E-value=0.3 Score=37.42 Aligned_cols=33 Identities=27% Similarity=0.396 Sum_probs=29.7
Q ss_pred CCeeEEEcccHHHHHHHHHHHHcC-CcEEEEEeC
Q 011787 214 PKKLVVIGAGYIGLEMGSVWARLG-SEVTVVEFA 246 (477)
Q Consensus 214 ~~~v~IiG~G~~g~e~a~~l~~~g-~~Vtli~~~ 246 (477)
.++++|+|+|.+|..++..|.+.| .+|+++.|+
T Consensus 5 ~~~v~I~G~G~iG~~~~~~l~~~g~~~v~~~~r~ 38 (118)
T 3ic5_A 5 RWNICVVGAGKIGQMIAALLKTSSNYSVTVADHD 38 (118)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHCSSEEEEEEESC
T ss_pred cCeEEEECCCHHHHHHHHHHHhCCCceEEEEeCC
Confidence 468999999999999999999999 788888775
No 476
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=89.96 E-value=0.37 Score=38.24 Aligned_cols=32 Identities=13% Similarity=0.485 Sum_probs=29.2
Q ss_pred CeeEEEcccHHHHHHHHHHHHcCCcEEEEEeC
Q 011787 215 KKLVVIGAGYIGLEMGSVWARLGSEVTVVEFA 246 (477)
Q Consensus 215 ~~v~IiG~G~~g~e~a~~l~~~g~~Vtli~~~ 246 (477)
.+++|+|+|..|..++..|.+.|.+|+++.++
T Consensus 5 m~i~IiG~G~iG~~~a~~L~~~g~~v~~~d~~ 36 (140)
T 1lss_A 5 MYIIIAGIGRVGYTLAKSLSEKGHDIVLIDID 36 (140)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEEEEECC
Confidence 57999999999999999999999999998764
No 477
>2qyt_A 2-dehydropantoate 2-reductase; APC81190, porphyromonas gingi W83, structural genomics, PSI-2; HET: MSE; 2.15A {Porphyromonas gingivalis}
Probab=89.94 E-value=0.19 Score=46.54 Aligned_cols=32 Identities=25% Similarity=0.238 Sum_probs=29.4
Q ss_pred CCcEEEECCChHHHHHHHHHHHC-----C-CeEEEEec
Q 011787 43 ENDVVVIGGGPGGYVAAIKAAQL-----G-LKTTCIEK 74 (477)
Q Consensus 43 ~~dvvIIGgG~AGl~aA~~l~~~-----g-~~V~lie~ 74 (477)
+++|.|||+|.-|...|..|.+. | ++|+++++
T Consensus 8 ~m~I~iiG~G~mG~~~a~~L~~~~~~~~g~~~V~~~~r 45 (317)
T 2qyt_A 8 PIKIAVFGLGGVGGYYGAMLALRAAATDGLLEVSWIAR 45 (317)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHHHHTTSSEEEEEECC
T ss_pred CCEEEEECcCHHHHHHHHHHHhCccccCCCCCEEEEEc
Confidence 35899999999999999999998 9 99999976
No 478
>1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1
Probab=89.88 E-value=0.27 Score=44.42 Aligned_cols=35 Identities=26% Similarity=0.359 Sum_probs=31.9
Q ss_pred CCCeeEEEcccHHHHHHHHHHHHcCCcEEEEEeCC
Q 011787 213 VPKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAA 247 (477)
Q Consensus 213 ~~~~v~IiG~G~~g~e~a~~l~~~g~~Vtli~~~~ 247 (477)
.+++|+|||+|.+|...+..|.+.|.+|+++....
T Consensus 12 ~~k~VLVVGgG~va~rka~~Ll~~Ga~VtViap~~ 46 (274)
T 1kyq_A 12 KDKRILLIGGGEVGLTRLYKLMPTGCKLTLVSPDL 46 (274)
T ss_dssp TTCEEEEEEESHHHHHHHHHHGGGTCEEEEEEEEE
T ss_pred CCCEEEEECCcHHHHHHHHHHHhCCCEEEEEcCCC
Confidence 47899999999999999999999999999998643
No 479
>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}
Probab=89.83 E-value=0.45 Score=43.95 Aligned_cols=34 Identities=29% Similarity=0.274 Sum_probs=31.1
Q ss_pred CCCcEEEECCChHHHHHHHHHHHCCCeEEEEecC
Q 011787 42 DENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKR 75 (477)
Q Consensus 42 ~~~dvvIIGgG~AGl~aA~~l~~~g~~V~lie~~ 75 (477)
...+|.|||.|.-|...|..|.+.|++|+++|++
T Consensus 8 ~~~~IgiIG~G~mG~~~A~~l~~~G~~V~~~dr~ 41 (306)
T 3l6d_A 8 FEFDVSVIGLGAMGTIMAQVLLKQGKRVAIWNRS 41 (306)
T ss_dssp CSCSEEEECCSHHHHHHHHHHHHTTCCEEEECSS
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 3468999999999999999999999999999983
No 480
>3k5i_A Phosphoribosyl-aminoimidazole carboxylase; purine biosynthesis, ATP-grAsp, lyase; HET: NHE ADP AIR; 2.00A {Aspergillus clavatus} PDB: 3k5h_A*
Probab=89.83 E-value=0.29 Score=47.25 Aligned_cols=37 Identities=22% Similarity=0.356 Sum_probs=32.0
Q ss_pred CCCCCCCCcEEEECCChHHHHHHHHHHHCCCeEEEEe
Q 011787 37 FASASDENDVVVIGGGPGGYVAAIKAAQLGLKTTCIE 73 (477)
Q Consensus 37 ~~~~~~~~dvvIIGgG~AGl~aA~~l~~~g~~V~lie 73 (477)
...|+...+|+|+|||..|...+..+++.|++|.++|
T Consensus 18 ~~~mm~~~~I~ilGgG~lg~~l~~aa~~lG~~v~~~d 54 (403)
T 3k5i_A 18 QGHMWNSRKVGVLGGGQLGRMLVESANRLNIQVNVLD 54 (403)
T ss_dssp ---CCSCCEEEEECCSHHHHHHHHHHHHHTCEEEEEE
T ss_pred eccCCCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEE
Confidence 4556667899999999999999999999999999999
No 481
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=89.81 E-value=0.41 Score=43.52 Aligned_cols=34 Identities=18% Similarity=0.279 Sum_probs=31.0
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCeEEEEecCC
Q 011787 43 ENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRG 76 (477)
Q Consensus 43 ~~dvvIIGgG~AGl~aA~~l~~~g~~V~lie~~~ 76 (477)
+++|+|.|+|.-|...+..|.+.|++|++++++.
T Consensus 3 ~~~ilVtGaG~iG~~l~~~L~~~g~~V~~~~r~~ 36 (286)
T 3gpi_A 3 LSKILIAGCGDLGLELARRLTAQGHEVTGLRRSA 36 (286)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCCEEEEECTT
T ss_pred CCcEEEECCCHHHHHHHHHHHHCCCEEEEEeCCc
Confidence 3579999999999999999999999999999853
No 482
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*
Probab=89.71 E-value=0.29 Score=48.07 Aligned_cols=33 Identities=21% Similarity=0.275 Sum_probs=30.9
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCeEEEEecC
Q 011787 43 ENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKR 75 (477)
Q Consensus 43 ~~dvvIIGgG~AGl~aA~~l~~~g~~V~lie~~ 75 (477)
..+|+|||||..|...+..|.+.|.+|+|++++
T Consensus 12 ~~~vlVvGgG~va~~k~~~L~~~ga~V~vi~~~ 44 (457)
T 1pjq_A 12 DRDCLIVGGGDVAERKARLLLEAGARLTVNALT 44 (457)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTBEEEEEESS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCcCEEEEEcCC
Confidence 468999999999999999999999999999984
No 483
>3q2o_A Phosphoribosylaminoimidazole carboxylase, ATPase; carboxylates, ATP binding, lyase; 1.96A {Bacillus anthracis} PDB: 3qff_A* 3r5h_A*
Probab=89.68 E-value=0.5 Score=45.28 Aligned_cols=35 Identities=26% Similarity=0.494 Sum_probs=31.8
Q ss_pred CCCcEEEECCChHHHHHHHHHHHCCCeEEEEecCC
Q 011787 42 DENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRG 76 (477)
Q Consensus 42 ~~~dvvIIGgG~AGl~aA~~l~~~g~~V~lie~~~ 76 (477)
....|+|||+|..|...+..+++.|++|+++|...
T Consensus 13 ~~k~IlIlG~G~~g~~la~aa~~~G~~vi~~d~~~ 47 (389)
T 3q2o_A 13 PGKTIGIIGGGQLGRMMALAAKEMGYKIAVLDPTK 47 (389)
T ss_dssp TTSEEEEECCSHHHHHHHHHHHHTTCEEEEEESST
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCEEEEEeCCC
Confidence 45689999999999999999999999999999743
No 484
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=89.67 E-value=0.38 Score=45.81 Aligned_cols=32 Identities=34% Similarity=0.493 Sum_probs=30.1
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCeEEEEec
Q 011787 43 ENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEK 74 (477)
Q Consensus 43 ~~dvvIIGgG~AGl~aA~~l~~~g~~V~lie~ 74 (477)
...|+|+|+|..|..+|..|+..|.+|+++|+
T Consensus 166 ~~~V~ViGaG~iG~~~a~~l~~~Ga~V~~~d~ 197 (369)
T 2eez_A 166 PASVVILGGGTVGTNAAKIALGMGAQVTILDV 197 (369)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEES
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEEEC
Confidence 36899999999999999999999999999998
No 485
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}
Probab=89.66 E-value=0.17 Score=44.33 Aligned_cols=33 Identities=15% Similarity=0.181 Sum_probs=30.0
Q ss_pred CCCcEEEECCChHHHHHHHHHHHCCCeEEE-Eec
Q 011787 42 DENDVVVIGGGPGGYVAAIKAAQLGLKTTC-IEK 74 (477)
Q Consensus 42 ~~~dvvIIGgG~AGl~aA~~l~~~g~~V~l-ie~ 74 (477)
.+++|.|||+|.-|.+.|..|.+.|++|++ +++
T Consensus 22 ~mmkI~IIG~G~mG~~la~~l~~~g~~V~~v~~r 55 (220)
T 4huj_A 22 SMTTYAIIGAGAIGSALAERFTAAQIPAIIANSR 55 (220)
T ss_dssp GSCCEEEEECHHHHHHHHHHHHHTTCCEEEECTT
T ss_pred cCCEEEEECCCHHHHHHHHHHHhCCCEEEEEECC
Confidence 356899999999999999999999999998 776
No 486
>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5
Probab=89.62 E-value=0.39 Score=43.51 Aligned_cols=32 Identities=16% Similarity=0.210 Sum_probs=30.0
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCeEEEEec
Q 011787 43 ENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEK 74 (477)
Q Consensus 43 ~~dvvIIGgG~AGl~aA~~l~~~g~~V~lie~ 74 (477)
...++|+|+|-+|.++|..|.+.|.+|+++++
T Consensus 119 ~k~vlViGaGg~g~a~a~~L~~~G~~V~v~~R 150 (271)
T 1nyt_A 119 GLRILLIGAGGASRGVLLPLLSLDCAVTITNR 150 (271)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEECS
T ss_pred CCEEEEECCcHHHHHHHHHHHHcCCEEEEEEC
Confidence 46899999999999999999999999999988
No 487
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=89.49 E-value=0.33 Score=47.52 Aligned_cols=32 Identities=38% Similarity=0.559 Sum_probs=30.3
Q ss_pred CcEEEECCChHHHHHHHHHHHCCCeEEEEecC
Q 011787 44 NDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKR 75 (477)
Q Consensus 44 ~dvvIIGgG~AGl~aA~~l~~~g~~V~lie~~ 75 (477)
++|.|||.|..|+..|..|++.|++|+++|++
T Consensus 3 mkI~VIG~G~vG~~lA~~La~~G~~V~~~D~~ 34 (450)
T 3gg2_A 3 LDIAVVGIGYVGLVSATCFAELGANVRCIDTD 34 (450)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSC
T ss_pred CEEEEECcCHHHHHHHHHHHhcCCEEEEEECC
Confidence 58999999999999999999999999999984
No 488
>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}
Probab=89.49 E-value=0.43 Score=44.30 Aligned_cols=33 Identities=18% Similarity=0.181 Sum_probs=30.1
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCC-eEEEEecC
Q 011787 43 ENDVVVIGGGPGGYVAAIKAAQLGL-KTTCIEKR 75 (477)
Q Consensus 43 ~~dvvIIGgG~AGl~aA~~l~~~g~-~V~lie~~ 75 (477)
..+|.|||+|..|.+.|..|+..+. ++.++|.+
T Consensus 5 ~~kI~iiGaG~vG~~~a~~l~~~~~~~v~l~Di~ 38 (321)
T 3p7m_A 5 RKKITLVGAGNIGGTLAHLALIKQLGDVVLFDIA 38 (321)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCceEEEEeCC
Confidence 4689999999999999999999887 99999984
No 489
>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*
Probab=89.43 E-value=0.42 Score=41.55 Aligned_cols=31 Identities=19% Similarity=0.220 Sum_probs=29.4
Q ss_pred CcEEEECCChHHHHHHHHHHHCCCeEEEEec
Q 011787 44 NDVVVIGGGPGGYVAAIKAAQLGLKTTCIEK 74 (477)
Q Consensus 44 ~dvvIIGgG~AGl~aA~~l~~~g~~V~lie~ 74 (477)
.++.|||+|..|...|..|.+.|++|+++++
T Consensus 29 ~~I~iiG~G~~G~~la~~l~~~g~~V~~~~r 59 (215)
T 2vns_A 29 PKVGILGSGDFARSLATRLVGSGFKVVVGSR 59 (215)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEEES
T ss_pred CEEEEEccCHHHHHHHHHHHHCCCEEEEEeC
Confidence 5799999999999999999999999999988
No 490
>3g17_A Similar to 2-dehydropantoate 2-reductase; structural genomics, putative 2-dehydropantoate 2-reductase, protein structure initiative; 2.30A {Staphylococcus aureus subsp}
Probab=89.38 E-value=0.25 Score=45.33 Aligned_cols=32 Identities=31% Similarity=0.279 Sum_probs=30.0
Q ss_pred CcEEEECCChHHHHHHHHHHHCCCeEEEEecC
Q 011787 44 NDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKR 75 (477)
Q Consensus 44 ~dvvIIGgG~AGl~aA~~l~~~g~~V~lie~~ 75 (477)
++|.|||+|.-|.+.|..|.+.|.+|++++++
T Consensus 3 mkI~iiGaGa~G~~~a~~L~~~g~~V~~~~r~ 34 (294)
T 3g17_A 3 LSVAIIGPGAVGTTIAYELQQSLPHTTLIGRH 34 (294)
T ss_dssp CCEEEECCSHHHHHHHHHHHHHCTTCEEEESS
T ss_pred cEEEEECCCHHHHHHHHHHHHCCCeEEEEEec
Confidence 57999999999999999999999999999984
No 491
>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}
Probab=89.37 E-value=0.36 Score=44.34 Aligned_cols=32 Identities=22% Similarity=0.227 Sum_probs=30.0
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCeEEEEec
Q 011787 43 ENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEK 74 (477)
Q Consensus 43 ~~dvvIIGgG~AGl~aA~~l~~~g~~V~lie~ 74 (477)
+++|.|||.|..|...|..|.+.|++|+++++
T Consensus 4 ~~~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~ 35 (301)
T 3cky_A 4 SIKIGFIGLGAMGKPMAINLLKEGVTVYAFDL 35 (301)
T ss_dssp CCEEEEECCCTTHHHHHHHHHHTTCEEEEECS
T ss_pred CCEEEEECccHHHHHHHHHHHHCCCeEEEEeC
Confidence 46899999999999999999999999999987
No 492
>3k6j_A Protein F01G10.3, confirmed by transcript evidenc; rossmann fold, oxidoreductase; 2.20A {Caenorhabditis elegans}
Probab=89.36 E-value=0.66 Score=45.29 Aligned_cols=34 Identities=35% Similarity=0.497 Sum_probs=31.2
Q ss_pred CCCcEEEECCChHHHHHHHHHHHCCCeEEEEecC
Q 011787 42 DENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKR 75 (477)
Q Consensus 42 ~~~dvvIIGgG~AGl~aA~~l~~~g~~V~lie~~ 75 (477)
...+|.|||+|.-|...|..|++.|++|+++|++
T Consensus 53 ~i~kVaVIGaG~MG~~IA~~la~aG~~V~l~D~~ 86 (460)
T 3k6j_A 53 DVNSVAIIGGGTMGKAMAICFGLAGIETFLVVRN 86 (460)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSC
T ss_pred cCCEEEEECCCHHHHHHHHHHHHCCCeEEEEECc
Confidence 3468999999999999999999999999999984
No 493
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=89.36 E-value=0.41 Score=45.68 Aligned_cols=32 Identities=44% Similarity=0.627 Sum_probs=30.2
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCeEEEEec
Q 011787 43 ENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEK 74 (477)
Q Consensus 43 ~~dvvIIGgG~AGl~aA~~l~~~g~~V~lie~ 74 (477)
..+|+|||+|..|..+|..|+..|.+|+++|+
T Consensus 168 g~~V~ViG~G~iG~~~a~~a~~~Ga~V~~~d~ 199 (377)
T 2vhw_A 168 PADVVVIGAGTAGYNAARIANGMGATVTVLDI 199 (377)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEES
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEEeC
Confidence 46899999999999999999999999999998
No 494
>2q3e_A UDP-glucose 6-dehydrogenase; hexamer, structural genomics, S genomics consortium, SGC, oxidoreductase; HET: NAD UPG; 2.00A {Homo sapiens} PDB: 2qg4_A* 3khu_A* 3itk_A* 3tdk_A* 3ptz_A* 3prj_A* 3tf5_A
Probab=89.15 E-value=0.32 Score=47.99 Aligned_cols=33 Identities=18% Similarity=0.290 Sum_probs=30.3
Q ss_pred CCcEEEECCChHHHHHHHHHHHC--CCeEEEEecC
Q 011787 43 ENDVVVIGGGPGGYVAAIKAAQL--GLKTTCIEKR 75 (477)
Q Consensus 43 ~~dvvIIGgG~AGl~aA~~l~~~--g~~V~lie~~ 75 (477)
+++|.|||.|..|...|..|++. |++|+++|++
T Consensus 5 ~mkI~VIG~G~mG~~lA~~La~~g~G~~V~~~d~~ 39 (467)
T 2q3e_A 5 IKKICCIGAGYVGGPTCSVIAHMCPEIRVTVVDVN 39 (467)
T ss_dssp CCEEEEECCSTTHHHHHHHHHHHCTTSEEEEECSC
T ss_pred ccEEEEECCCHHHHHHHHHHHhcCCCCEEEEEECC
Confidence 46899999999999999999998 8999999983
No 495
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=89.13 E-value=0.32 Score=42.41 Aligned_cols=33 Identities=24% Similarity=0.366 Sum_probs=30.3
Q ss_pred CCcEEEECC-ChHHHHHHHHHHHCCCeEEEEecC
Q 011787 43 ENDVVVIGG-GPGGYVAAIKAAQLGLKTTCIEKR 75 (477)
Q Consensus 43 ~~dvvIIGg-G~AGl~aA~~l~~~g~~V~lie~~ 75 (477)
+++|+|.|| |..|...+..|.+.|++|++++++
T Consensus 4 m~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~ 37 (227)
T 3dhn_A 4 VKKIVLIGASGFVGSALLNEALNRGFEVTAVVRH 37 (227)
T ss_dssp CCEEEEETCCHHHHHHHHHHHHTTTCEEEEECSC
T ss_pred CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEEcC
Confidence 468999996 999999999999999999999984
No 496
>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A*
Probab=89.06 E-value=0.36 Score=46.76 Aligned_cols=34 Identities=18% Similarity=0.219 Sum_probs=30.0
Q ss_pred CCCCcEEEECCChHHHHHHHHHHHCCCeEEEEecC
Q 011787 41 SDENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKR 75 (477)
Q Consensus 41 ~~~~dvvIIGgG~AGl~aA~~l~~~g~~V~lie~~ 75 (477)
+..++|.|||.|..|+..|..|++ |++|+++|++
T Consensus 34 ~~~mkIaVIGlG~mG~~lA~~La~-G~~V~~~D~~ 67 (432)
T 3pid_A 34 SEFMKITISGTGYVGLSNGVLIAQ-NHEVVALDIV 67 (432)
T ss_dssp -CCCEEEEECCSHHHHHHHHHHHT-TSEEEEECSC
T ss_pred cCCCEEEEECcCHHHHHHHHHHHc-CCeEEEEecC
Confidence 345689999999999999999998 9999999984
No 497
>3mog_A Probable 3-hydroxybutyryl-COA dehydrogenase; structural genomics, PSI, protein structure initiative, NYSG oxidoreductase; 2.20A {Escherichia coli}
Probab=88.94 E-value=0.42 Score=47.21 Aligned_cols=33 Identities=30% Similarity=0.248 Sum_probs=30.7
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCeEEEEecC
Q 011787 43 ENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKR 75 (477)
Q Consensus 43 ~~dvvIIGgG~AGl~aA~~l~~~g~~V~lie~~ 75 (477)
..+|.|||+|.-|...|..|++.|++|+++|++
T Consensus 5 ~~kVgVIGaG~MG~~IA~~la~aG~~V~l~D~~ 37 (483)
T 3mog_A 5 VQTVAVIGSGTMGAGIAEVAASHGHQVLLYDIS 37 (483)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCCEEEECSC
T ss_pred CCEEEEECcCHHHHHHHHHHHHCCCeEEEEECC
Confidence 458999999999999999999999999999984
No 498
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=88.83 E-value=0.45 Score=46.79 Aligned_cols=33 Identities=30% Similarity=0.388 Sum_probs=30.5
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCeEEEEecC
Q 011787 43 ENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKR 75 (477)
Q Consensus 43 ~~dvvIIGgG~AGl~aA~~l~~~g~~V~lie~~ 75 (477)
..+|.|||+|.-|...|..|++.|++|+++|++
T Consensus 37 ~~kV~VIGaG~MG~~iA~~la~~G~~V~l~D~~ 69 (463)
T 1zcj_A 37 VSSVGVLGLGTMGRGIAISFARVGISVVAVESD 69 (463)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTCEEEEECSS
T ss_pred CCEEEEECcCHHHHHHHHHHHhCCCeEEEEECC
Confidence 457999999999999999999999999999983
No 499
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=88.82 E-value=0.41 Score=38.13 Aligned_cols=33 Identities=33% Similarity=0.499 Sum_probs=29.8
Q ss_pred CCeeEEEcccHHHHHHHHHHHHcCCcEEEEEeC
Q 011787 214 PKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFA 246 (477)
Q Consensus 214 ~~~v~IiG~G~~g~e~a~~l~~~g~~Vtli~~~ 246 (477)
.++++|+|+|.+|..++..|.+.|.+|+++.++
T Consensus 6 ~~~v~I~G~G~iG~~~a~~l~~~g~~v~~~d~~ 38 (144)
T 2hmt_A 6 NKQFAVIGLGRFGGSIVKELHRMGHEVLAVDIN 38 (144)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCCEEEESC
T ss_pred CCcEEEECCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 467999999999999999999999999998764
No 500
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=88.79 E-value=0.45 Score=46.37 Aligned_cols=34 Identities=24% Similarity=0.476 Sum_probs=31.8
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCeEEEEecCC
Q 011787 43 ENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRG 76 (477)
Q Consensus 43 ~~dvvIIGgG~AGl~aA~~l~~~g~~V~lie~~~ 76 (477)
..++.|||.|.-|+..|..|++.|++|+++|+++
T Consensus 8 ~~~~~vIGlG~vG~~~A~~La~~G~~V~~~D~~~ 41 (446)
T 4a7p_A 8 SVRIAMIGTGYVGLVSGACFSDFGHEVVCVDKDA 41 (446)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCS
T ss_pred ceEEEEEcCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 4789999999999999999999999999999864
Done!