Query 011789
Match_columns 477
No_of_seqs 130 out of 1487
Neff 9.5
Searched_HMMs 29240
Date Mon Mar 25 15:21:23 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/011789.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/011789hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3hbf_A Flavonoid 3-O-glucosylt 100.0 2.5E-69 8.7E-74 543.8 38.4 436 7-468 12-453 (454)
2 2pq6_A UDP-glucuronosyl/UDP-gl 100.0 3.4E-65 1.2E-69 523.5 38.1 454 1-468 1-478 (482)
3 2c1x_A UDP-glucose flavonoid 3 100.0 3.8E-63 1.3E-67 503.6 38.1 444 1-469 1-452 (456)
4 2vch_A Hydroquinone glucosyltr 100.0 1.3E-60 4.5E-65 488.0 46.3 442 6-469 4-469 (480)
5 2acv_A Triterpene UDP-glucosyl 100.0 1.8E-58 6.3E-63 470.4 38.2 429 6-468 7-462 (463)
6 2iya_A OLEI, oleandomycin glyc 100.0 2.8E-45 9.7E-50 370.8 35.2 382 6-448 10-405 (424)
7 4amg_A Snogd; transferase, pol 100.0 4.5E-44 1.5E-48 359.0 29.5 345 7-449 21-385 (400)
8 1iir_A Glycosyltransferase GTF 100.0 9.4E-43 3.2E-47 351.3 24.0 376 9-468 1-399 (415)
9 3rsc_A CALG2; TDP, enediyne, s 100.0 9.3E-41 3.2E-45 336.7 32.6 379 4-466 16-411 (415)
10 1rrv_A Glycosyltransferase GTF 100.0 8.7E-42 3E-46 344.3 22.7 364 9-448 1-385 (416)
11 3ia7_A CALG4; glycosysltransfe 100.0 1.1E-39 3.9E-44 327.0 35.1 374 7-468 3-398 (402)
12 3h4t_A Glycosyltransferase GTF 100.0 6.2E-41 2.1E-45 336.6 21.0 348 9-447 1-366 (404)
13 2yjn_A ERYCIII, glycosyltransf 100.0 1.8E-39 6.1E-44 329.9 29.2 357 6-448 18-419 (441)
14 2p6p_A Glycosyl transferase; X 100.0 1.4E-37 4.7E-42 310.2 34.2 338 9-448 1-363 (384)
15 2iyf_A OLED, oleandomycin glyc 100.0 7.9E-38 2.7E-42 316.8 32.4 364 6-448 5-383 (430)
16 4fzr_A SSFS6; structural genom 100.0 2.6E-36 8.7E-41 302.5 26.7 343 5-448 12-384 (398)
17 3oti_A CALG3; calicheamicin, T 100.0 1.3E-35 4.5E-40 297.4 27.8 337 6-448 18-381 (398)
18 3tsa_A SPNG, NDP-rhamnosyltran 100.0 1.8E-34 6E-39 288.4 29.0 338 8-448 1-372 (391)
19 3otg_A CALG1; calicheamicin, T 100.0 2.5E-32 8.7E-37 274.6 33.8 355 5-465 17-405 (412)
20 3s2u_A UDP-N-acetylglucosamine 100.0 2E-28 6.7E-33 241.9 27.2 304 9-430 3-325 (365)
21 2o6l_A UDP-glucuronosyltransfe 99.9 1.8E-26 6.2E-31 202.7 14.3 160 270-448 9-170 (170)
22 1f0k_A MURG, UDP-N-acetylgluco 99.9 6.1E-20 2.1E-24 180.9 24.1 311 9-445 7-336 (364)
23 3hbm_A UDP-sugar hydrolase; PS 99.7 3.4E-15 1.2E-19 140.2 20.6 114 281-408 156-272 (282)
24 2jzc_A UDP-N-acetylglucosamine 99.6 1.7E-15 5.7E-20 136.6 8.1 131 280-426 26-196 (224)
25 3c48_A Predicted glycosyltrans 99.4 6.5E-11 2.2E-15 119.1 28.3 358 6-446 18-409 (438)
26 1v4v_A UDP-N-acetylglucosamine 99.4 1.5E-12 5.2E-17 128.4 14.4 134 281-438 197-340 (376)
27 3fro_A GLGA glycogen synthase; 99.4 4.3E-10 1.5E-14 112.8 31.5 401 8-474 2-434 (439)
28 3okp_A GDP-mannose-dependent a 99.4 1.2E-10 4.1E-15 115.2 24.0 349 6-471 2-380 (394)
29 2gek_A Phosphatidylinositol ma 99.3 1.5E-10 5.2E-15 115.0 24.0 342 6-471 18-384 (406)
30 3ot5_A UDP-N-acetylglucosamine 99.3 1.4E-11 4.8E-16 122.6 16.4 136 281-439 223-368 (403)
31 3dzc_A UDP-N-acetylglucosamine 99.3 1.9E-11 6.4E-16 121.5 15.9 330 6-438 23-373 (396)
32 1vgv_A UDP-N-acetylglucosamine 99.3 2.8E-11 9.7E-16 119.5 16.2 130 281-430 204-343 (384)
33 2r60_A Glycosyl transferase, g 99.3 1.3E-09 4.5E-14 111.6 27.6 170 283-471 262-460 (499)
34 3beo_A UDP-N-acetylglucosamine 99.2 9.3E-10 3.2E-14 108.2 20.4 130 281-430 204-343 (375)
35 2iuy_A Avigt4, glycosyltransfe 99.2 1.2E-09 4.2E-14 106.0 18.2 125 285-428 164-307 (342)
36 2iw1_A Lipopolysaccharide core 99.1 8E-08 2.7E-12 94.0 29.8 128 282-430 195-338 (374)
37 2jjm_A Glycosyl transferase, g 99.1 2.5E-08 8.5E-13 98.7 25.9 116 341-472 267-387 (394)
38 4hwg_A UDP-N-acetylglucosamine 99.0 3.7E-09 1.3E-13 104.2 16.2 322 1-430 1-343 (385)
39 2x6q_A Trehalose-synthase TRET 98.9 1.4E-07 4.7E-12 94.0 23.5 112 340-469 292-413 (416)
40 3oy2_A Glycosyltransferase B73 98.7 9.5E-07 3.2E-11 87.8 21.5 113 343-472 256-392 (413)
41 2vsy_A XCC0866; transferase, g 98.7 2.5E-05 8.5E-10 81.0 32.8 123 341-476 434-565 (568)
42 3s28_A Sucrose synthase 1; gly 98.7 2.8E-06 9.4E-11 91.0 24.8 113 340-468 639-767 (816)
43 1rzu_A Glycogen synthase 1; gl 98.6 1.3E-05 4.4E-10 81.4 24.7 162 284-471 292-476 (485)
44 2qzs_A Glycogen synthase; glyc 98.5 3.7E-05 1.3E-09 77.9 27.3 162 283-471 292-477 (485)
45 2hy7_A Glucuronosyltransferase 98.5 3.4E-06 1.2E-10 83.7 18.9 75 340-430 264-353 (406)
46 2f9f_A First mannosyl transfer 98.5 3E-07 1E-11 80.1 8.7 140 284-444 24-175 (177)
47 2xci_A KDO-transferase, 3-deox 98.4 5.3E-05 1.8E-09 74.2 23.8 97 342-447 261-364 (374)
48 2bfw_A GLGA glycogen synthase; 97.8 0.00016 5.4E-09 63.7 11.9 78 342-430 96-182 (200)
49 4gyw_A UDP-N-acetylglucosamine 97.8 0.0005 1.7E-08 73.1 17.5 177 281-476 521-711 (723)
50 3qhp_A Type 1 capsular polysac 97.8 8.2E-05 2.8E-09 63.4 9.3 141 283-445 2-157 (166)
51 3tov_A Glycosyl transferase fa 97.6 0.0028 9.6E-08 61.2 17.5 110 3-147 3-116 (349)
52 3q3e_A HMW1C-like glycosyltran 97.5 0.00093 3.2E-08 68.5 12.7 134 283-430 441-589 (631)
53 1psw_A ADP-heptose LPS heptosy 97.4 0.024 8.1E-07 54.3 21.3 104 9-147 1-107 (348)
54 3rhz_A GTF3, nucleotide sugar 97.2 0.00043 1.5E-08 66.6 6.9 111 342-467 215-337 (339)
55 2gt1_A Lipopolysaccharide hept 96.8 0.014 4.8E-07 55.5 12.8 45 9-53 1-47 (326)
56 3vue_A GBSS-I, granule-bound s 94.6 0.22 7.6E-06 50.7 11.6 134 282-428 326-476 (536)
57 2x0d_A WSAF; GT4 family, trans 94.5 0.016 5.3E-07 57.3 2.7 84 341-438 295-385 (413)
58 2phj_A 5'-nucleotidase SURE; S 92.5 0.84 2.9E-05 41.1 10.2 114 8-149 1-127 (251)
59 3vue_A GBSS-I, granule-bound s 92.0 0.089 3.1E-06 53.7 3.8 39 5-45 6-52 (536)
60 3ty2_A 5'-nucleotidase SURE; s 90.4 0.84 2.9E-05 41.2 7.9 115 5-149 8-135 (261)
61 2x0d_A WSAF; GT4 family, trans 87.2 0.36 1.2E-05 47.4 3.6 41 6-46 44-89 (413)
62 4dzz_A Plasmid partitioning pr 86.4 3.1 0.0001 35.8 8.9 42 8-49 1-43 (206)
63 3igf_A ALL4481 protein; two-do 86.0 2.6 8.9E-05 40.5 8.8 40 8-48 1-41 (374)
64 1g5t_A COB(I)alamin adenosyltr 84.8 6.5 0.00022 33.9 9.9 98 7-130 27-130 (196)
65 2wqk_A 5'-nucleotidase SURE; S 84.3 3.8 0.00013 36.9 8.6 114 8-149 1-127 (251)
66 1uqt_A Alpha, alpha-trehalose- 84.0 6.1 0.00021 39.4 10.9 109 343-470 333-454 (482)
67 3dfu_A Uncharacterized protein 83.1 3.4 0.00012 36.7 7.6 37 4-45 2-38 (232)
68 3zqu_A Probable aromatic acid 82.0 1.8 6E-05 37.9 5.2 45 6-51 2-46 (209)
69 3t5t_A Putative glycosyltransf 81.9 12 0.00041 37.3 11.8 111 342-470 353-473 (496)
70 3iqw_A Tail-anchored protein t 81.4 9.6 0.00033 35.9 10.6 43 7-49 14-57 (334)
71 1l5x_A SurviVal protein E; str 81.1 10 0.00035 34.6 10.1 113 9-149 1-127 (280)
72 2ejb_A Probable aromatic acid 81.1 2.2 7.5E-05 36.7 5.4 43 8-51 1-43 (189)
73 1j9j_A Stationary phase surviV 80.8 7.2 0.00025 34.9 8.9 114 9-149 1-128 (247)
74 2vqe_B 30S ribosomal protein S 80.3 7.6 0.00026 34.9 8.8 33 119-151 157-191 (256)
75 2ywr_A Phosphoribosylglycinami 79.5 17 0.00059 31.7 10.9 35 8-45 1-37 (216)
76 3nb0_A Glycogen [starch] synth 79.2 6.5 0.00022 40.8 9.0 45 341-387 490-550 (725)
77 2e6c_A 5'-nucleotidase SURE; S 79.1 10 0.00035 33.9 9.3 112 9-149 1-129 (244)
78 3auf_A Glycinamide ribonucleot 77.9 32 0.0011 30.3 12.2 103 6-149 20-131 (229)
79 3qjg_A Epidermin biosynthesis 76.9 3.6 0.00012 34.8 5.4 42 9-51 6-47 (175)
80 3lqk_A Dipicolinate synthase s 76.6 3 0.0001 36.2 4.9 46 5-51 4-50 (201)
81 3qxc_A Dethiobiotin synthetase 76.1 6.7 0.00023 35.1 7.3 37 6-42 18-56 (242)
82 1sbz_A Probable aromatic acid 75.8 2.9 0.0001 36.1 4.6 42 9-51 1-43 (197)
83 1kjn_A MTH0777; hypotethical p 75.1 4.3 0.00015 32.9 5.0 51 6-56 4-57 (157)
84 3fgn_A Dethiobiotin synthetase 74.9 6.8 0.00023 35.2 7.0 37 6-42 23-61 (251)
85 3ug7_A Arsenical pump-driving 73.5 22 0.00077 33.5 10.8 43 6-48 23-66 (349)
86 3ea0_A ATPase, para family; al 71.5 15 0.00051 32.3 8.6 41 7-47 2-45 (245)
87 1mvl_A PPC decarboxylase athal 70.7 6.1 0.00021 34.4 5.4 43 7-51 18-60 (209)
88 3lyu_A Putative hydrogenase; t 70.4 30 0.001 27.7 9.4 40 8-50 18-57 (142)
89 2v4n_A Multifunctional protein 69.8 26 0.00088 31.4 9.5 41 9-51 2-42 (254)
90 1g63_A Epidermin modifying enz 69.5 4.8 0.00017 34.2 4.4 43 8-51 2-44 (181)
91 3av3_A Phosphoribosylglycinami 68.8 57 0.002 28.2 11.6 102 8-149 3-112 (212)
92 3la6_A Tyrosine-protein kinase 68.6 9.9 0.00034 34.9 6.8 40 8-47 91-132 (286)
93 3bfv_A CAPA1, CAPB2, membrane 68.5 30 0.001 31.3 10.0 41 7-47 80-122 (271)
94 3mcu_A Dipicolinate synthase, 67.8 5.6 0.00019 34.6 4.5 44 7-51 4-48 (207)
95 4b4o_A Epimerase family protei 67.3 5.2 0.00018 36.7 4.7 34 9-46 1-34 (298)
96 1fmt_A Methionyl-tRNA FMet for 66.8 32 0.0011 32.0 9.9 34 7-45 2-35 (314)
97 1p3y_1 MRSD protein; flavoprot 66.2 4.2 0.00015 35.0 3.4 44 7-51 7-50 (194)
98 1ccw_A Protein (glutamate muta 65.5 8.5 0.00029 30.9 5.0 44 8-51 3-46 (137)
99 3ih5_A Electron transfer flavo 65.3 18 0.00061 31.6 7.4 107 7-147 2-121 (217)
100 4dim_A Phosphoribosylglycinami 64.4 21 0.0007 34.3 8.5 36 6-46 5-40 (403)
101 2yxb_A Coenzyme B12-dependent 64.3 6.5 0.00022 32.6 4.2 44 7-50 17-60 (161)
102 1jx7_A Hypothetical protein YC 63.4 12 0.00041 28.7 5.4 44 8-51 1-49 (117)
103 3bbn_B Ribosomal protein S2; s 63.0 4.3 0.00015 35.9 2.9 31 120-150 157-189 (231)
104 3mc3_A DSRE/DSRF-like family p 62.7 16 0.00056 29.0 6.2 45 7-51 14-61 (134)
105 3eag_A UDP-N-acetylmuramate:L- 62.2 8.3 0.00029 36.1 5.0 35 6-44 2-36 (326)
106 1xmp_A PURE, phosphoribosylami 61.8 68 0.0023 26.6 12.4 142 282-450 11-163 (170)
107 3vot_A L-amino acid ligase, BL 59.8 51 0.0017 31.8 10.5 38 4-46 1-38 (425)
108 1psw_A ADP-heptose LPS heptosy 59.8 57 0.0019 30.2 10.6 42 9-50 181-227 (348)
109 2r8r_A Sensor protein; KDPD, P 59.2 14 0.00048 32.5 5.6 41 6-46 4-44 (228)
110 3n7t_A Macrophage binding prot 58.4 20 0.00068 32.0 6.6 40 7-46 8-58 (247)
111 1qzu_A Hypothetical protein MD 57.8 10 0.00035 32.9 4.4 45 6-51 17-62 (206)
112 3qvl_A Putative hydantoin race 57.7 60 0.0021 28.8 9.7 37 9-45 2-39 (245)
113 3mjf_A Phosphoribosylamine--gl 57.6 14 0.00047 36.2 5.8 37 7-48 2-38 (431)
114 2vo1_A CTP synthase 1; pyrimid 57.6 11 0.00037 34.0 4.4 44 6-49 20-66 (295)
115 1y80_A Predicted cobalamin bin 57.3 14 0.00048 32.0 5.3 45 7-51 87-131 (210)
116 2qyt_A 2-dehydropantoate 2-red 56.4 4.5 0.00015 37.5 2.0 38 3-45 3-46 (317)
117 2bw0_A 10-FTHFDH, 10-formyltet 55.6 21 0.00073 33.4 6.5 32 8-44 22-53 (329)
118 3rfo_A Methionyl-tRNA formyltr 55.3 13 0.00045 34.6 5.0 36 6-46 2-37 (317)
119 1uan_A Hypothetical protein TT 55.1 48 0.0016 29.0 8.5 35 8-43 1-36 (227)
120 3da8_A Probable 5'-phosphoribo 54.8 33 0.0011 29.8 7.2 40 5-47 9-49 (215)
121 1f0y_A HCDH, L-3-hydroxyacyl-C 54.6 9 0.00031 35.3 3.8 37 4-45 11-47 (302)
122 3obb_A Probable 3-hydroxyisobu 54.3 11 0.00036 35.0 4.2 33 7-44 2-34 (300)
123 3f6r_A Flavodoxin; FMN binding 54.1 13 0.00045 29.8 4.3 39 8-46 1-40 (148)
124 3fkq_A NTRC-like two-domain pr 53.7 50 0.0017 31.3 9.1 39 7-45 141-181 (373)
125 1lss_A TRK system potassium up 53.5 10 0.00034 29.9 3.5 34 8-46 4-37 (140)
126 3dhn_A NAD-dependent epimerase 53.5 13 0.00045 32.1 4.6 36 7-46 3-38 (227)
127 2i2x_B MTAC, methyltransferase 53.5 17 0.00059 32.7 5.4 43 6-48 121-163 (258)
128 2ew2_A 2-dehydropantoate 2-red 53.2 9.8 0.00034 35.0 3.8 34 7-45 2-35 (316)
129 3tov_A Glycosyl transferase fa 53.0 70 0.0024 29.9 9.9 100 8-149 185-288 (349)
130 3kjh_A CO dehydrogenase/acetyl 52.8 11 0.00037 33.2 3.9 38 9-46 1-38 (254)
131 3tqr_A Phosphoribosylglycinami 52.7 87 0.003 27.2 9.5 104 5-149 2-113 (215)
132 3ezx_A MMCP 1, monomethylamine 52.7 20 0.00067 31.3 5.4 46 6-51 90-135 (215)
133 3dii_A Short-chain dehydrogena 52.4 84 0.0029 27.5 9.9 36 8-46 1-36 (247)
134 3pdi_B Nitrogenase MOFE cofact 52.3 60 0.0021 31.9 9.5 87 8-147 313-399 (458)
135 3ouz_A Biotin carboxylase; str 51.8 39 0.0013 32.9 8.1 37 6-47 4-40 (446)
136 2c5m_A CTP synthase; cytidine 51.6 10 0.00034 34.0 3.2 42 7-48 21-65 (294)
137 3doj_A AT3G25530, dehydrogenas 51.4 16 0.00054 33.8 4.9 36 5-45 18-53 (310)
138 1gsa_A Glutathione synthetase; 50.6 13 0.00046 34.0 4.3 38 8-45 1-41 (316)
139 3llv_A Exopolyphosphatase-rela 50.5 12 0.0004 29.8 3.4 35 7-46 5-39 (141)
140 2h78_A Hibadh, 3-hydroxyisobut 49.7 14 0.00047 34.0 4.2 34 7-45 2-35 (302)
141 3k96_A Glycerol-3-phosphate de 49.3 11 0.00039 35.8 3.6 38 4-46 25-62 (356)
142 1o4v_A Phosphoribosylaminoimid 48.9 1.2E+02 0.0041 25.5 10.8 139 283-449 14-162 (183)
143 3dm5_A SRP54, signal recogniti 48.9 1E+02 0.0036 30.0 10.4 42 8-49 100-141 (443)
144 1id1_A Putative potassium chan 48.6 16 0.00054 29.6 4.0 33 8-45 3-35 (153)
145 4b4k_A N5-carboxyaminoimidazol 48.0 1.2E+02 0.0042 25.3 11.9 139 282-449 22-173 (181)
146 3cio_A ETK, tyrosine-protein k 47.9 85 0.0029 28.7 9.3 39 8-46 103-143 (299)
147 3io3_A DEHA2D07832P; chaperone 47.9 69 0.0024 30.1 8.8 41 8-48 17-60 (348)
148 3hn2_A 2-dehydropantoate 2-red 47.8 24 0.00081 32.6 5.5 39 9-53 3-42 (312)
149 3ghy_A Ketopantoate reductase 47.8 11 0.00038 35.3 3.3 40 7-51 2-41 (335)
150 1qgu_B Protein (nitrogenase mo 47.6 1.3E+02 0.0044 30.0 11.2 35 8-47 360-394 (519)
151 3kkl_A Probable chaperone prot 47.2 29 0.00098 30.9 5.7 41 7-47 2-53 (244)
152 4dll_A 2-hydroxy-3-oxopropiona 46.7 22 0.00076 33.0 5.2 35 6-45 29-63 (320)
153 2a5l_A Trp repressor binding p 46.3 25 0.00085 29.8 5.1 40 7-46 4-44 (200)
154 1efp_B ETF, protein (electron 45.6 1.6E+02 0.0056 26.1 11.4 30 120-149 113-148 (252)
155 3u7q_A Nitrogenase molybdenum- 45.4 92 0.0032 30.9 9.7 25 120-147 417-441 (492)
156 3ic5_A Putative saccharopine d 45.1 15 0.00052 27.7 3.2 35 7-46 4-39 (118)
157 3to5_A CHEY homolog; alpha(5)b 44.9 33 0.0011 27.2 5.2 32 120-151 57-97 (134)
158 3qjg_A Epidermin biosynthesis 44.8 53 0.0018 27.5 6.7 113 283-405 7-142 (175)
159 4huj_A Uncharacterized protein 44.8 12 0.0004 32.7 2.7 35 6-45 21-55 (220)
160 3hwr_A 2-dehydropantoate 2-red 44.3 14 0.00049 34.3 3.4 41 6-51 17-57 (318)
161 2afh_E Nitrogenase iron protei 44.3 22 0.00077 32.2 4.7 40 7-46 1-40 (289)
162 2lpm_A Two-component response 44.1 18 0.00061 28.4 3.4 28 120-147 53-85 (123)
163 3gpi_A NAD-dependent epimerase 44.0 24 0.00084 31.7 4.9 34 7-45 2-35 (286)
164 1cp2_A CP2, nitrogenase iron p 43.9 22 0.00074 31.8 4.5 39 8-46 1-39 (269)
165 1u11_A PURE (N5-carboxyaminoim 43.7 1.4E+02 0.0049 24.9 12.1 140 283-452 22-175 (182)
166 2zki_A 199AA long hypothetical 43.7 23 0.00078 30.0 4.4 39 7-46 3-42 (199)
167 3ius_A Uncharacterized conserv 43.3 21 0.00073 32.1 4.4 35 8-47 5-39 (286)
168 3u7q_B Nitrogenase molybdenum- 43.1 1.5E+02 0.0051 29.6 10.8 34 8-46 364-397 (523)
169 2bln_A Protein YFBG; transfera 42.9 1E+02 0.0034 28.4 8.9 33 9-46 1-33 (305)
170 3ged_A Short-chain dehydrogena 42.8 1.4E+02 0.0049 26.3 9.7 36 8-46 1-36 (247)
171 2a33_A Hypothetical protein; s 42.6 39 0.0013 29.4 5.6 47 4-50 9-60 (215)
172 3pdu_A 3-hydroxyisobutyrate de 42.5 19 0.00067 32.7 4.0 34 8-46 1-34 (287)
173 3q9l_A Septum site-determining 42.3 25 0.00085 31.1 4.6 39 8-46 1-41 (260)
174 3qsg_A NAD-binding phosphogluc 42.2 15 0.0005 34.1 3.1 35 6-45 22-57 (312)
175 2xj4_A MIPZ; replication, cell 41.8 26 0.0009 31.8 4.8 39 8-46 3-43 (286)
176 3g0o_A 3-hydroxyisobutyrate de 41.7 16 0.00056 33.6 3.3 35 6-45 5-39 (303)
177 2raf_A Putative dinucleotide-b 41.4 23 0.00078 30.5 4.1 34 6-44 17-50 (209)
178 3i83_A 2-dehydropantoate 2-red 41.3 22 0.00074 33.1 4.1 39 9-53 3-42 (320)
179 1g3q_A MIND ATPase, cell divis 41.2 28 0.00097 30.2 4.8 39 8-46 1-41 (237)
180 3ew7_A LMO0794 protein; Q8Y8U8 41.2 28 0.00096 29.7 4.7 34 9-46 1-34 (221)
181 4hb9_A Similarities with proba 41.1 19 0.00064 34.3 3.8 30 9-43 2-31 (412)
182 3nva_A CTP synthase; rossman f 40.9 27 0.00093 34.8 4.8 42 8-49 2-46 (535)
183 2g1u_A Hypothetical protein TM 40.8 34 0.0012 27.6 4.9 35 7-46 18-52 (155)
184 3gl9_A Response regulator; bet 40.5 47 0.0016 25.0 5.5 32 120-151 46-86 (122)
185 1yb4_A Tartronic semialdehyde 40.4 16 0.00056 33.2 3.1 32 7-43 2-33 (295)
186 1yde_A Retinal dehydrogenase/r 40.0 1.8E+02 0.0062 25.7 10.2 35 9-46 9-43 (270)
187 1ks9_A KPA reductase;, 2-dehyd 39.9 24 0.00081 31.9 4.1 33 9-46 1-33 (291)
188 1bg6_A N-(1-D-carboxylethyl)-L 39.9 22 0.00074 33.4 4.0 33 8-45 4-36 (359)
189 3b6i_A Flavoprotein WRBA; flav 39.5 34 0.0012 28.8 4.8 38 8-45 1-40 (198)
190 2hy5_B Intracellular sulfur ox 39.1 42 0.0014 26.8 4.9 46 6-51 3-51 (136)
191 2q5c_A NTRC family transcripti 39.1 32 0.0011 29.4 4.5 45 104-153 128-172 (196)
192 2ixd_A LMBE-related protein; h 39.0 1.1E+02 0.0039 26.9 8.4 33 10-43 6-38 (242)
193 3zq6_A Putative arsenical pump 38.8 28 0.00095 32.4 4.5 41 7-47 12-53 (324)
194 2iz6_A Molybdenum cofactor car 38.8 27 0.00094 29.3 3.9 134 270-428 35-173 (176)
195 2ark_A Flavodoxin; FMN, struct 38.1 36 0.0012 28.6 4.7 41 6-46 2-44 (188)
196 2vns_A Metalloreductase steap3 38.0 23 0.0008 30.6 3.6 35 6-45 26-60 (215)
197 3kcq_A Phosphoribosylglycinami 37.7 1.6E+02 0.0053 25.5 8.8 102 3-149 3-112 (215)
198 3gi1_A LBP, laminin-binding pr 37.6 99 0.0034 28.0 7.9 42 105-148 215-258 (286)
199 1rw7_A YDR533CP; alpha-beta sa 37.3 61 0.0021 28.6 6.3 40 8-47 3-53 (243)
200 3fwz_A Inner membrane protein 37.0 21 0.00072 28.3 2.9 36 8-48 7-42 (140)
201 3end_A Light-independent proto 36.8 35 0.0012 31.2 4.8 40 7-46 40-79 (307)
202 2q62_A ARSH; alpha/beta, flavo 36.8 47 0.0016 29.5 5.4 40 4-43 30-72 (247)
203 3r8n_B 30S ribosomal protein S 36.7 16 0.00055 31.9 2.2 32 119-150 148-181 (218)
204 3c24_A Putative oxidoreductase 36.6 31 0.0011 31.2 4.4 33 8-45 11-44 (286)
205 3c1o_A Eugenol synthase; pheny 36.4 31 0.0011 31.7 4.4 36 7-46 3-38 (321)
206 2r85_A PURP protein PF1517; AT 36.1 31 0.0011 31.8 4.4 35 8-48 2-36 (334)
207 4gbj_A 6-phosphogluconate dehy 36.0 31 0.0011 31.6 4.2 29 10-43 7-35 (297)
208 3lrx_A Putative hydrogenase; a 35.9 33 0.0011 28.0 4.0 41 8-51 23-63 (158)
209 3rg8_A Phosphoribosylaminoimid 35.9 1.8E+02 0.0061 23.8 9.2 136 284-448 4-148 (159)
210 1wcv_1 SOJ, segregation protei 35.9 32 0.0011 30.5 4.2 40 8-47 5-46 (257)
211 4dgk_A Phytoene dehydrogenase; 35.8 17 0.00058 36.0 2.6 32 8-44 1-32 (501)
212 2qs7_A Uncharacterized protein 35.7 53 0.0018 26.4 5.1 42 10-51 9-51 (144)
213 2w70_A Biotin carboxylase; lig 35.5 70 0.0024 31.0 7.0 33 8-45 2-34 (449)
214 1t1j_A Hypothetical protein; s 35.3 54 0.0018 25.7 4.8 35 6-40 5-47 (125)
215 3lp6_A Phosphoribosylaminoimid 35.3 1.9E+02 0.0066 24.0 9.3 139 283-449 8-156 (174)
216 3qha_A Putative oxidoreductase 35.1 22 0.00075 32.6 3.0 34 8-46 15-48 (296)
217 4ezb_A Uncharacterized conserv 35.1 28 0.00097 32.2 3.8 33 8-45 24-57 (317)
218 3l4b_C TRKA K+ channel protien 35.1 16 0.00056 31.6 2.1 34 9-47 1-34 (218)
219 1z82_A Glycerol-3-phosphate de 35.0 29 0.00099 32.3 3.9 35 6-45 12-46 (335)
220 1hyq_A MIND, cell division inh 34.7 33 0.0011 30.5 4.1 39 8-46 1-41 (263)
221 2lnd_A De novo designed protei 34.7 56 0.0019 23.1 4.2 49 377-428 49-100 (112)
222 2i2c_A Probable inorganic poly 34.4 17 0.00058 33.0 2.1 50 362-429 38-93 (272)
223 2vpq_A Acetyl-COA carboxylase; 34.1 46 0.0016 32.4 5.4 35 8-47 1-35 (451)
224 3ego_A Probable 2-dehydropanto 34.0 25 0.00086 32.4 3.3 38 8-51 2-40 (307)
225 2xw6_A MGS, methylglyoxal synt 33.9 1.4E+02 0.0049 23.6 7.2 97 6-147 1-111 (134)
226 2c5a_A GDP-mannose-3', 5'-epim 33.8 54 0.0018 31.0 5.7 37 6-46 27-63 (379)
227 3t6k_A Response regulator rece 33.6 74 0.0025 24.4 5.7 32 120-151 48-88 (136)
228 1xrs_B D-lysine 5,6-aminomutas 33.5 77 0.0026 28.4 6.2 45 7-51 119-172 (262)
229 1ydg_A Trp repressor binding p 33.4 55 0.0019 27.9 5.2 39 6-44 4-43 (211)
230 4g65_A TRK system potassium up 33.4 14 0.00049 36.5 1.5 36 7-47 2-37 (461)
231 3dfz_A SIRC, precorrin-2 dehyd 33.3 36 0.0012 29.8 4.0 149 275-449 26-186 (223)
232 2ahr_A Putative pyrroline carb 33.3 32 0.0011 30.6 3.8 34 7-45 2-35 (259)
233 2hy5_A Putative sulfurtransfer 33.2 87 0.003 24.4 6.0 43 9-51 1-47 (130)
234 3sbx_A Putative uncharacterize 33.2 55 0.0019 27.8 4.9 45 6-51 11-60 (189)
235 2an1_A Putative kinase; struct 33.2 39 0.0013 30.8 4.4 38 6-43 3-41 (292)
236 1e2b_A Enzyme IIB-cellobiose; 32.9 70 0.0024 24.1 5.1 36 7-42 2-37 (106)
237 1ydh_A AT5G11950; structural g 32.6 67 0.0023 27.9 5.5 47 5-51 6-57 (216)
238 3s2u_A UDP-N-acetylglucosamine 32.6 71 0.0024 30.0 6.3 26 357-384 92-120 (365)
239 2rh8_A Anthocyanidin reductase 32.3 47 0.0016 30.6 5.0 41 1-44 1-41 (338)
240 3l6d_A Putative oxidoreductase 32.1 27 0.00093 32.1 3.2 35 6-45 7-41 (306)
241 1qyd_A Pinoresinol-lariciresin 32.0 41 0.0014 30.6 4.4 35 8-46 4-38 (313)
242 3r6d_A NAD-dependent epimerase 32.0 55 0.0019 27.9 5.1 37 7-46 3-40 (221)
243 2hmt_A YUAA protein; RCK, KTN, 32.0 29 0.00099 27.2 3.0 35 7-46 5-39 (144)
244 2q1s_A Putative nucleotide sug 31.9 40 0.0014 31.9 4.4 36 6-45 30-66 (377)
245 3m1a_A Putative dehydrogenase; 31.8 2.6E+02 0.009 24.6 9.9 35 9-46 5-39 (281)
246 2gt1_A Lipopolysaccharide hept 31.6 49 0.0017 30.4 4.9 28 120-149 253-280 (326)
247 4eg0_A D-alanine--D-alanine li 31.6 52 0.0018 30.2 5.1 39 8-46 13-55 (317)
248 1ulz_A Pyruvate carboxylase N- 31.6 1E+02 0.0035 29.8 7.5 35 8-47 2-36 (451)
249 2x4g_A Nucleoside-diphosphate- 31.6 49 0.0017 30.5 4.9 36 7-46 12-47 (342)
250 1t5b_A Acyl carrier protein ph 31.5 46 0.0016 28.0 4.4 37 8-44 1-43 (201)
251 1p9o_A Phosphopantothenoylcyst 31.5 41 0.0014 31.2 4.1 24 24-47 67-90 (313)
252 1qkk_A DCTD, C4-dicarboxylate 31.5 1.1E+02 0.0039 23.8 6.7 49 378-430 74-122 (155)
253 2r6j_A Eugenol synthase 1; phe 31.5 46 0.0016 30.4 4.7 33 10-46 13-45 (318)
254 3cky_A 2-hydroxymethyl glutara 31.3 50 0.0017 30.0 4.9 33 7-44 3-35 (301)
255 2cvz_A Dehydrogenase, 3-hydrox 31.3 31 0.001 31.2 3.3 32 8-45 1-32 (289)
256 1mio_B Nitrogenase molybdenum 31.2 1E+02 0.0035 30.1 7.4 25 120-147 385-409 (458)
257 1q74_A 1D-MYO-inosityl 2-aceta 31.2 1.2E+02 0.0041 27.8 7.4 36 9-45 5-41 (303)
258 3g79_A NDP-N-acetyl-D-galactos 31.1 50 0.0017 32.6 5.0 37 6-47 16-54 (478)
259 1lld_A L-lactate dehydrogenase 31.0 30 0.001 31.9 3.3 38 4-46 3-42 (319)
260 3e8x_A Putative NAD-dependent 30.9 53 0.0018 28.4 4.8 37 7-47 20-56 (236)
261 2pju_A Propionate catabolism o 30.8 43 0.0015 29.4 4.0 41 104-149 140-180 (225)
262 3bgw_A DNAB-like replicative h 30.6 1.9E+02 0.0066 28.0 9.2 42 10-51 199-240 (444)
263 3m6m_D Sensory/regulatory prot 30.6 65 0.0022 25.1 4.9 31 120-150 58-99 (143)
264 2gas_A Isoflavone reductase; N 30.6 36 0.0012 30.8 3.8 35 8-46 2-36 (307)
265 2z04_A Phosphoribosylaminoimid 30.4 54 0.0019 30.8 5.1 35 8-47 1-35 (365)
266 2c20_A UDP-glucose 4-epimerase 30.4 39 0.0013 31.0 4.0 34 8-45 1-34 (330)
267 3imf_A Short chain dehydrogena 30.3 2.5E+02 0.0085 24.4 9.3 34 10-46 7-40 (257)
268 3ax6_A Phosphoribosylaminoimid 30.1 70 0.0024 30.2 5.8 35 8-47 1-35 (380)
269 1tvm_A PTS system, galactitol- 30.0 75 0.0026 24.2 4.9 38 6-43 19-57 (113)
270 2d1p_B TUSC, hypothetical UPF0 30.0 66 0.0023 24.7 4.6 44 8-51 1-47 (119)
271 1orr_A CDP-tyvelose-2-epimeras 30.0 49 0.0017 30.5 4.7 33 8-44 1-33 (347)
272 4hv4_A UDP-N-acetylmuramate--L 29.8 54 0.0019 32.5 5.1 36 4-43 18-53 (494)
273 2gk4_A Conserved hypothetical 29.8 37 0.0013 29.9 3.4 26 19-46 28-53 (232)
274 2ph1_A Nucleotide-binding prot 29.7 53 0.0018 29.2 4.6 42 7-48 16-59 (262)
275 1pno_A NAD(P) transhydrogenase 29.7 53 0.0018 27.1 3.9 40 9-48 24-66 (180)
276 3q0i_A Methionyl-tRNA formyltr 29.7 73 0.0025 29.5 5.6 35 7-46 6-40 (318)
277 3h2s_A Putative NADH-flavin re 29.7 44 0.0015 28.5 4.0 34 9-46 1-34 (224)
278 2b69_A UDP-glucuronate decarbo 29.2 55 0.0019 30.3 4.8 36 6-45 25-60 (343)
279 1iow_A DD-ligase, DDLB, D-ALA\ 29.1 68 0.0023 29.0 5.4 38 8-45 2-43 (306)
280 4e12_A Diketoreductase; oxidor 29.1 50 0.0017 29.9 4.4 34 7-45 3-36 (283)
281 1kjq_A GART 2, phosphoribosylg 29.1 55 0.0019 31.0 4.9 38 5-47 8-45 (391)
282 1hdo_A Biliverdin IX beta redu 29.1 68 0.0023 26.7 5.1 34 9-46 4-37 (206)
283 2dpo_A L-gulonate 3-dehydrogen 29.0 38 0.0013 31.5 3.5 36 6-46 4-39 (319)
284 1d4o_A NADP(H) transhydrogenas 29.0 55 0.0019 27.1 3.9 40 9-48 23-65 (184)
285 1txg_A Glycerol-3-phosphate de 28.9 33 0.0011 31.8 3.2 31 9-44 1-31 (335)
286 1sqs_A Conserved hypothetical 28.9 54 0.0018 28.8 4.5 36 8-43 1-40 (242)
287 2ywx_A Phosphoribosylaminoimid 28.7 2.4E+02 0.0081 23.0 12.7 132 285-448 2-143 (157)
288 3f6p_A Transcriptional regulat 28.7 87 0.003 23.3 5.2 32 120-151 46-83 (120)
289 1vdc_A NTR, NADPH dependent th 28.7 19 0.00065 33.3 1.4 39 1-44 1-39 (333)
290 3pef_A 6-phosphogluconate dehy 28.6 54 0.0018 29.6 4.5 33 9-46 2-34 (287)
291 3g17_A Similar to 2-dehydropan 28.6 19 0.00065 33.0 1.4 33 8-45 2-34 (294)
292 2q3e_A UDP-glucose 6-dehydroge 28.6 49 0.0017 32.5 4.5 35 6-45 3-39 (467)
293 3op4_A 3-oxoacyl-[acyl-carrier 28.6 83 0.0028 27.6 5.7 43 1-46 1-43 (248)
294 1vco_A CTP synthetase; tetrame 28.5 39 0.0013 34.1 3.7 42 6-47 9-53 (550)
295 3dtt_A NADP oxidoreductase; st 28.5 50 0.0017 29.1 4.1 35 7-46 18-52 (245)
296 2l2q_A PTS system, cellobiose- 28.4 63 0.0022 24.4 4.2 34 8-41 4-37 (109)
297 2w36_A Endonuclease V; hypoxan 28.4 1.1E+02 0.0038 26.7 6.1 29 119-147 102-137 (225)
298 2vrn_A Protease I, DR1199; cys 28.4 1.2E+02 0.0042 25.1 6.5 40 6-46 7-46 (190)
299 4gi5_A Quinone reductase; prot 28.1 87 0.003 28.4 5.7 37 6-42 20-59 (280)
300 2y0c_A BCEC, UDP-glucose dehyd 28.0 45 0.0015 33.0 4.1 36 5-45 5-40 (478)
301 2hpv_A FMN-dependent NADH-azor 28.0 54 0.0018 27.9 4.2 37 8-44 1-44 (208)
302 1jay_A Coenzyme F420H2:NADP+ o 27.9 53 0.0018 27.9 4.2 32 9-45 1-33 (212)
303 3f2v_A General stress protein 27.8 40 0.0014 28.7 3.2 36 8-43 1-37 (192)
304 2vzf_A NADH-dependent FMN redu 27.7 57 0.002 27.5 4.3 36 8-43 2-41 (197)
305 2d1p_A TUSD, hypothetical UPF0 27.6 93 0.0032 24.8 5.2 46 6-51 10-59 (140)
306 2hna_A Protein MIOC, flavodoxi 27.5 66 0.0022 25.5 4.4 36 8-43 1-37 (147)
307 3f67_A Putative dienelactone h 27.4 76 0.0026 26.8 5.2 37 8-44 31-67 (241)
308 2uyy_A N-PAC protein; long-cha 27.3 57 0.002 29.9 4.5 34 7-45 29-62 (316)
309 3k9g_A PF-32 protein; ssgcid, 27.2 58 0.002 28.9 4.4 41 6-47 24-66 (267)
310 1evy_A Glycerol-3-phosphate de 27.1 36 0.0012 32.2 3.1 33 9-46 16-48 (366)
311 2o1e_A YCDH; alpha-beta protei 26.8 1.7E+02 0.0057 26.9 7.6 41 106-148 227-269 (312)
312 3rpe_A MDAB, modulator of drug 26.8 68 0.0023 27.9 4.6 39 6-44 23-68 (218)
313 1u0t_A Inorganic polyphosphate 26.8 58 0.002 30.0 4.4 37 8-44 4-41 (307)
314 3lp8_A Phosphoribosylamine-gly 26.7 87 0.003 30.5 5.9 27 6-37 19-45 (442)
315 1weh_A Conserved hypothetical 26.7 63 0.0022 26.8 4.2 44 8-51 1-48 (171)
316 1t35_A Hypothetical protein YV 26.7 80 0.0027 26.7 4.9 44 8-51 1-49 (191)
317 2fsv_C NAD(P) transhydrogenase 26.7 62 0.0021 27.4 3.9 40 9-48 47-89 (203)
318 2jk1_A HUPR, hydrogenase trans 26.6 1.4E+02 0.0046 22.8 6.2 47 378-428 71-118 (139)
319 3of5_A Dethiobiotin synthetase 26.6 74 0.0025 27.7 4.9 34 9-42 4-39 (228)
320 3qvo_A NMRA family protein; st 26.5 41 0.0014 29.3 3.2 36 8-46 22-58 (236)
321 4grd_A N5-CAIR mutase, phospho 26.5 2.8E+02 0.0094 23.0 11.9 143 281-449 11-163 (173)
322 3v8b_A Putative dehydrogenase, 26.3 3E+02 0.01 24.4 9.2 35 9-46 28-62 (283)
323 1pzg_A LDH, lactate dehydrogen 26.2 44 0.0015 31.2 3.5 38 4-46 5-43 (331)
324 3qrx_B Melittin; calcium-bindi 26.2 19 0.00064 19.1 0.5 17 368-384 1-17 (26)
325 4e21_A 6-phosphogluconate dehy 26.1 40 0.0014 31.9 3.2 34 7-45 21-54 (358)
326 3orf_A Dihydropteridine reduct 26.1 68 0.0023 28.2 4.6 38 6-46 19-56 (251)
327 1djl_A Transhydrogenase DIII; 25.9 65 0.0022 27.3 3.9 40 9-48 46-88 (207)
328 3bul_A Methionine synthase; tr 25.9 72 0.0025 32.3 5.2 45 7-51 97-141 (579)
329 3dqp_A Oxidoreductase YLBE; al 25.9 48 0.0016 28.3 3.5 34 9-46 1-34 (219)
330 1mxh_A Pteridine reductase 2; 25.9 68 0.0023 28.6 4.7 32 10-44 12-43 (276)
331 3czc_A RMPB; alpha/beta sandwi 25.9 75 0.0026 24.0 4.2 36 6-41 16-53 (110)
332 3ehd_A Uncharacterized conserv 25.8 1.5E+02 0.0051 24.4 6.2 39 6-44 2-41 (162)
333 3zzm_A Bifunctional purine bio 25.8 1.4E+02 0.0048 29.5 6.9 42 8-54 9-51 (523)
334 2pk3_A GDP-6-deoxy-D-LYXO-4-he 25.7 66 0.0023 29.2 4.7 36 6-45 10-45 (321)
335 3l77_A Short-chain alcohol deh 25.6 74 0.0025 27.4 4.8 35 9-46 2-36 (235)
336 1dbw_A Transcriptional regulat 25.6 1.3E+02 0.0045 22.3 5.8 32 120-151 47-85 (126)
337 3ruf_A WBGU; rossmann fold, UD 25.5 72 0.0024 29.5 4.9 36 7-46 24-59 (351)
338 1d4a_A DT-diaphorase, quinone 25.4 86 0.0029 28.2 5.2 38 7-44 1-41 (273)
339 1dhr_A Dihydropteridine reduct 25.4 75 0.0026 27.6 4.8 40 1-45 1-40 (241)
340 1u0t_A Inorganic polyphosphate 25.4 62 0.0021 29.8 4.3 32 354-387 72-107 (307)
341 1mv8_A GMD, GDP-mannose 6-dehy 25.3 65 0.0022 31.3 4.7 32 9-45 1-32 (436)
342 1q1v_A DEK protein; winged-hel 25.2 1.7E+02 0.0058 20.2 5.8 53 413-467 11-65 (70)
343 1jkx_A GART;, phosphoribosylgl 25.2 3.2E+02 0.011 23.3 12.0 100 9-149 1-109 (212)
344 2etv_A Iron(III) ABC transport 25.1 68 0.0023 29.9 4.7 28 120-147 96-124 (346)
345 2jae_A L-amino acid oxidase; o 25.1 70 0.0024 31.3 5.0 39 1-44 4-42 (489)
346 3c3m_A Response regulator rece 25.0 1.2E+02 0.0042 23.1 5.6 31 120-150 47-86 (138)
347 1vhq_A Enhancing lycopene bios 24.9 1.3E+02 0.0045 26.0 6.3 40 7-47 5-49 (232)
348 1eiw_A Hypothetical protein MT 24.9 1E+02 0.0035 23.5 4.7 65 355-428 36-109 (111)
349 2gf2_A Hibadh, 3-hydroxyisobut 24.9 50 0.0017 29.9 3.6 32 9-45 1-32 (296)
350 3tqq_A Methionyl-tRNA formyltr 24.9 67 0.0023 29.7 4.4 34 8-46 2-35 (314)
351 3gg2_A Sugar dehydrogenase, UD 24.8 54 0.0019 32.1 4.0 33 9-46 3-35 (450)
352 3c7a_A Octopine dehydrogenase; 24.8 31 0.0011 33.2 2.2 31 8-43 2-33 (404)
353 2g5c_A Prephenate dehydrogenas 24.6 59 0.002 29.2 4.0 33 8-45 1-35 (281)
354 3goc_A Endonuclease V; alpha-b 24.4 1.1E+02 0.0038 26.9 5.4 28 120-147 107-141 (237)
355 3lqk_A Dipicolinate synthase s 24.4 3.3E+02 0.011 23.1 8.6 53 376-429 120-186 (201)
356 1i36_A Conserved hypothetical 24.4 42 0.0015 29.8 2.9 29 9-42 1-29 (264)
357 1z7e_A Protein aRNA; rossmann 24.3 1.5E+02 0.0053 30.3 7.6 33 9-46 1-33 (660)
358 1q57_A DNA primase/helicase; d 24.3 2.1E+02 0.0071 28.2 8.3 42 10-51 244-286 (503)
359 3oow_A Phosphoribosylaminoimid 24.3 3E+02 0.01 22.6 13.2 139 283-450 6-157 (166)
360 3guy_A Short-chain dehydrogena 24.3 60 0.002 28.0 3.8 35 9-46 1-35 (230)
361 1vi6_A 30S ribosomal protein S 24.3 66 0.0023 27.7 3.9 31 120-150 115-147 (208)
362 3o1l_A Formyltetrahydrofolate 24.2 4.1E+02 0.014 24.2 12.3 103 6-149 103-211 (302)
363 1o97_C Electron transferring f 24.2 1.2E+02 0.0042 27.1 5.9 38 107-149 104-147 (264)
364 3pid_A UDP-glucose 6-dehydroge 24.1 56 0.0019 31.8 3.9 35 6-46 34-68 (432)
365 2bru_C NAD(P) transhydrogenase 24.1 59 0.002 26.9 3.3 40 9-48 31-73 (186)
366 1u9c_A APC35852; structural ge 23.9 1.4E+02 0.0049 25.5 6.3 39 9-47 6-53 (224)
367 3oti_A CALG3; calicheamicin, T 23.9 4.3E+02 0.015 24.5 10.3 90 9-147 232-325 (398)
368 3r5x_A D-alanine--D-alanine li 23.8 49 0.0017 30.1 3.3 45 7-51 2-50 (307)
369 3p9x_A Phosphoribosylglycinami 23.7 3.5E+02 0.012 23.2 9.9 105 8-149 2-111 (211)
370 4gwg_A 6-phosphogluconate dehy 23.7 47 0.0016 32.9 3.2 36 6-46 2-37 (484)
371 3r6w_A FMN-dependent NADH-azor 23.6 50 0.0017 28.3 3.2 37 8-44 1-43 (212)
372 1zi8_A Carboxymethylenebutenol 23.5 97 0.0033 26.0 5.1 38 8-45 27-64 (236)
373 3slg_A PBGP3 protein; structur 23.5 65 0.0022 30.1 4.2 36 7-46 23-59 (372)
374 3hn7_A UDP-N-acetylmuramate-L- 23.5 75 0.0026 31.8 4.8 34 7-44 18-51 (524)
375 3vps_A TUNA, NAD-dependent epi 23.4 70 0.0024 29.0 4.3 36 7-46 6-41 (321)
376 3ot1_A 4-methyl-5(B-hydroxyeth 23.3 1.3E+02 0.0046 25.5 5.9 37 9-46 10-46 (208)
377 3hly_A Flavodoxin-like domain; 23.2 96 0.0033 25.1 4.7 37 9-45 1-38 (161)
378 3m2p_A UDP-N-acetylglucosamine 23.1 84 0.0029 28.4 4.8 34 8-45 2-35 (311)
379 2q1w_A Putative nucleotide sug 23.1 83 0.0028 28.9 4.8 35 7-45 20-54 (333)
380 3tl4_X Glutaminyl-tRNA synthet 23.1 1.1E+02 0.0039 25.7 5.1 65 392-464 102-174 (187)
381 3rht_A (gatase1)-like protein; 23.1 44 0.0015 30.0 2.7 39 6-48 2-42 (259)
382 1vpd_A Tartronate semialdehyde 23.1 66 0.0022 29.1 4.0 32 9-45 6-37 (299)
383 3ppi_A 3-hydroxyacyl-COA dehyd 22.9 91 0.0031 27.8 4.9 34 9-45 30-63 (281)
384 3l3b_A ES1 family protein; ssg 22.9 1.5E+02 0.0051 26.1 6.2 38 9-47 24-66 (242)
385 1sb8_A WBPP; epimerase, 4-epim 22.9 86 0.0029 29.0 4.9 35 7-45 26-60 (352)
386 3foj_A Uncharacterized protein 22.7 1.6E+02 0.0055 21.3 5.5 38 8-50 56-93 (100)
387 3orq_A N5-carboxyaminoimidazol 22.7 83 0.0028 29.8 4.8 40 3-47 7-46 (377)
388 1n7h_A GDP-D-mannose-4,6-dehyd 22.7 79 0.0027 29.7 4.7 36 7-46 26-62 (381)
389 2qk4_A Trifunctional purine bi 22.6 2.4E+02 0.0084 27.1 8.3 31 9-44 25-56 (452)
390 2gkg_A Response regulator homo 22.6 1.1E+02 0.0036 22.7 4.7 48 378-430 79-126 (127)
391 1fjh_A 3alpha-hydroxysteroid d 22.6 86 0.003 27.4 4.6 33 9-44 1-33 (257)
392 2q6t_A DNAB replication FORK h 22.5 2.6E+02 0.0087 27.0 8.4 42 10-51 202-244 (444)
393 3nbm_A PTS system, lactose-spe 22.5 1E+02 0.0036 23.3 4.3 39 5-43 3-41 (108)
394 3bch_A 40S ribosomal protein S 22.5 71 0.0024 28.4 3.8 31 120-150 151-183 (253)
395 2f1k_A Prephenate dehydrogenas 22.4 67 0.0023 28.7 3.9 32 9-45 1-32 (279)
396 1rcu_A Conserved hypothetical 22.4 1.3E+02 0.0043 25.7 5.3 45 7-51 22-73 (195)
397 2ywl_A Thioredoxin reductase r 22.4 75 0.0025 26.0 3.9 34 8-46 1-34 (180)
398 1tmy_A CHEY protein, TMY; chem 22.1 1.4E+02 0.0049 21.8 5.3 32 120-151 47-85 (120)
399 1oi4_A Hypothetical protein YH 22.1 1.8E+02 0.0063 24.2 6.5 40 7-47 22-61 (193)
400 3lk7_A UDP-N-acetylmuramoylala 21.9 1E+02 0.0035 30.0 5.3 33 7-44 8-40 (451)
401 2ab0_A YAJL; DJ-1/THIJ superfa 21.9 1.6E+02 0.0056 24.8 6.1 39 8-47 2-40 (205)
402 3a10_A Response regulator; pho 21.8 1.9E+02 0.0065 20.8 6.0 31 120-150 45-82 (116)
403 3gt7_A Sensor protein; structu 21.8 1.4E+02 0.0046 23.4 5.3 31 120-150 51-90 (154)
404 4id9_A Short-chain dehydrogena 21.8 66 0.0023 29.7 3.8 37 6-46 17-53 (347)
405 3md9_A Hemin-binding periplasm 21.8 82 0.0028 27.6 4.3 28 120-147 59-88 (255)
406 1rpn_A GDP-mannose 4,6-dehydra 21.7 87 0.003 28.6 4.7 37 6-46 12-48 (335)
407 1hyh_A L-hicdh, L-2-hydroxyiso 21.7 45 0.0015 30.7 2.6 34 8-46 1-36 (309)
408 2h31_A Multifunctional protein 21.6 5.5E+02 0.019 24.7 10.8 140 281-448 264-411 (425)
409 4gdh_A DJ-1, uncharacterized p 21.5 1E+02 0.0034 26.0 4.6 42 6-48 2-43 (194)
410 1f4p_A Flavodoxin; electron tr 21.5 77 0.0026 25.0 3.7 36 9-44 1-37 (147)
411 2rjn_A Response regulator rece 21.4 1.5E+02 0.0052 23.0 5.6 43 107-151 40-89 (154)
412 3nhm_A Response regulator; pro 21.4 1.7E+02 0.0059 21.8 5.8 30 120-149 47-85 (133)
413 3pg5_A Uncharacterized protein 21.4 62 0.0021 30.5 3.6 39 9-47 2-41 (361)
414 1wrd_A TOM1, target of MYB pro 21.3 1.4E+02 0.0047 22.4 4.8 48 414-468 3-53 (103)
415 2ae2_A Protein (tropinone redu 21.2 1.3E+02 0.0045 26.4 5.6 33 10-45 10-42 (260)
416 2dzd_A Pyruvate carboxylase; b 21.2 75 0.0026 31.0 4.2 35 8-47 6-40 (461)
417 3psh_A Protein HI_1472; substr 21.1 78 0.0027 29.1 4.2 29 120-148 84-113 (326)
418 2fb6_A Conserved hypothetical 21.1 1.2E+02 0.004 23.3 4.5 42 9-50 8-53 (117)
419 1zgz_A Torcad operon transcrip 21.1 1.6E+02 0.0056 21.5 5.5 32 120-151 46-83 (122)
420 2pju_A Propionate catabolism o 21.0 69 0.0024 28.0 3.5 28 358-388 64-91 (225)
421 1c0p_A D-amino acid oxidase; a 21.0 86 0.003 29.1 4.5 34 7-45 5-38 (363)
422 2vou_A 2,6-dihydroxypyridine h 20.9 83 0.0028 29.8 4.4 35 6-45 3-37 (397)
423 3p0r_A Azoreductase; structura 20.9 79 0.0027 27.1 3.9 36 8-43 4-46 (211)
424 4hn9_A Iron complex transport 20.9 67 0.0023 29.8 3.6 29 120-148 116-144 (335)
425 3ihm_A Styrene monooxygenase A 20.9 55 0.0019 31.6 3.1 33 9-46 23-55 (430)
426 2dwc_A PH0318, 433AA long hypo 20.8 1.6E+02 0.0056 28.2 6.6 39 5-48 16-54 (433)
427 3trh_A Phosphoribosylaminoimid 20.7 3.6E+02 0.012 22.2 11.5 138 283-449 7-157 (169)
428 2wtm_A EST1E; hydrolase; 1.60A 20.6 1.2E+02 0.0041 26.0 5.2 37 9-45 27-65 (251)
429 4f0j_A Probable hydrolytic enz 20.6 93 0.0032 27.4 4.5 39 9-47 46-84 (315)
430 4ao6_A Esterase; hydrolase, th 20.5 82 0.0028 27.7 4.0 40 8-47 55-96 (259)
431 3itj_A Thioredoxin reductase 1 20.5 48 0.0016 30.3 2.5 36 6-46 20-55 (338)
432 1geg_A Acetoin reductase; SDR 20.4 1E+02 0.0035 27.0 4.6 35 9-46 2-36 (256)
433 3q2o_A Phosphoribosylaminoimid 20.4 1.2E+02 0.0042 28.6 5.5 39 3-46 9-47 (389)
434 4h15_A Short chain alcohol deh 20.4 1.5E+02 0.0051 26.4 5.7 32 10-44 12-43 (261)
435 4g6h_A Rotenone-insensitive NA 20.3 64 0.0022 32.0 3.5 36 6-46 40-75 (502)
436 3g1w_A Sugar ABC transporter; 20.3 4.4E+02 0.015 23.1 11.4 28 120-147 61-92 (305)
437 1i24_A Sulfolipid biosynthesis 20.1 95 0.0033 29.3 4.7 35 6-44 9-43 (404)
438 4ep4_A Crossover junction endo 20.1 2.7E+02 0.0093 22.8 6.8 42 104-150 52-108 (166)
439 4ffl_A PYLC; amino acid, biosy 20.1 92 0.0031 29.1 4.5 34 8-46 1-34 (363)
440 3k7m_X 6-hydroxy-L-nicotine ox 20.1 61 0.0021 31.1 3.2 32 8-44 1-32 (431)
441 3ka7_A Oxidoreductase; structu 20.1 68 0.0023 30.6 3.6 32 9-45 1-32 (425)
442 3enk_A UDP-glucose 4-epimerase 20.1 1.1E+02 0.0037 28.0 5.0 34 7-44 4-37 (341)
443 1pjq_A CYSG, siroheme synthase 20.0 3.7E+02 0.013 26.1 8.9 143 281-449 12-168 (457)
No 1
>3hbf_A Flavonoid 3-O-glucosyltransferase; glycosyltransferase, GT-B fold, GT1, phenylpropanoid metabolism; HET: UDP MYC; 2.10A {Medicago truncatula} SCOP: c.87.1.0 PDB: 3hbj_A*
Probab=100.00 E-value=2.5e-69 Score=543.76 Aligned_cols=436 Identities=25% Similarity=0.478 Sum_probs=359.7
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHhCC--CeEEEEeCCcchhhh-ccCCCCCCccccccccCCCCCeEEEecCCCCC
Q 011789 7 QKPHAIFISYPLQGHVNPSVQLALKLASQG--FTITFVNTHFIHQQM-TKASPEMGSDIFAGVRKSGLDIRYMTLSDGLP 83 (477)
Q Consensus 7 ~~~~il~~~~~~~GH~~p~l~La~~L~~rG--h~Vt~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 83 (477)
.+.||+++|+|++||++|++.||+.|++|| +.|||++++.+...+ .... ...++++|..+|++++
T Consensus 12 ~~~hvv~~P~p~~GHi~P~l~Lak~L~~~g~~~~vT~~~t~~~~~~~~~~~~------------~~~~~i~~~~ipdglp 79 (454)
T 3hbf_A 12 NLLHVAVLAFPFGTHAAPLLSLVKKIATEAPKVTFSFFCTTTTNDTLFSRSN------------EFLPNIKYYNVHDGLP 79 (454)
T ss_dssp CCCEEEEECCCSSSSHHHHHHHHHHHHHHCTTSEEEEEECHHHHHHSCSSSS------------CCCTTEEEEECCCCCC
T ss_pred CCCEEEEEcCCcccHHHHHHHHHHHHHhCCCCEEEEEEeCHHHHHhhhcccc------------cCCCCceEEecCCCCC
Confidence 468999999999999999999999999999 999999998777666 3310 0123799999999988
Q ss_pred CCCCCCCcHHHHHHHHHHHhHHHHHHHHHHhHhc-CCCccEEEecCCCcchHHHHHHhCCceEEEecchhHHHHHHhhhh
Q 011789 84 LGFDRSLNHEQFMSSLLHVFSAHAEEVIGQIVRS-GENVHCLIADTYFVWPSKLAKKFGLYYISFWTESALVFTLYYHLD 162 (477)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~-~~~pD~iI~D~~~~~~~~~A~~~gIP~v~~~~~~~~~~~~~~~~~ 162 (477)
.+.+...+....+..+...+...+++.++++..+ +.++|+||+|.++.|+..+|+++|||++.+|+++++.+..+++++
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~iI~D~~~~w~~~vA~~lgIP~~~f~t~~a~~~~~~~~~~ 159 (454)
T 3hbf_A 80 KGYVSSGNPREPIFLFIKAMQENFKHVIDEAVAETGKNITCLVTDAFFWFGADLAEEMHAKWVPLWTAGPHSLLTHVYTD 159 (454)
T ss_dssp TTCCCCSCTTHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEETTCTTHHHHHHHTTCEEEEEECSCHHHHHHHHTHH
T ss_pred CCccccCChHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCcEEEECCcchHHHHHHHHhCCCEEEEeCccHHHHHHHHhhH
Confidence 7654444433444444455555566666654322 348999999999999999999999999999999999998888876
Q ss_pred hhhhcCCcCCCCCCCCcccccCCCCCCCCCCCccccccCCCchhHHHHHHHHhhhccCCcEEEEcchhhccHHHHHHHHc
Q 011789 163 LLTINGHFQCYDCREDTIDYIPGVKAINPKDTTSYLQETDTTSACHQIIFNSFQDTRNADYVLCNTVHELESEAVTALKA 242 (477)
Q Consensus 163 ~~~~~~~~p~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~l~~~~~~~~~~ 242 (477)
......... .........++|+++.++.++++.++.. .....+.+.+.+..+...+++.+++|++++||++.++.+++
T Consensus 160 ~~~~~~~~~-~~~~~~~~~~iPg~p~~~~~dlp~~~~~-~~~~~~~~~~~~~~~~~~~~~~vl~ns~~eLE~~~~~~~~~ 237 (454)
T 3hbf_A 160 LIREKTGSK-EVHDVKSIDVLPGFPELKASDLPEGVIK-DIDVPFATMLHKMGLELPRANAVAINSFATIHPLIENELNS 237 (454)
T ss_dssp HHHHTCCHH-HHTTSSCBCCSTTSCCBCGGGSCTTSSS-CTTSHHHHHHHHHHHHGGGSSCEEESSCGGGCHHHHHHHHT
T ss_pred HHHhhcCCC-ccccccccccCCCCCCcChhhCchhhcc-CCchHHHHHHHHHHHhhccCCEEEECChhHhCHHHHHHHHh
Confidence 544331110 0011223456899988888888877654 44455667777777888899999999999999999999999
Q ss_pred cCC-EEEeCccCCCCCCccccccccCCccccchhhccCCCCcEEEEEecccccCCHHHHHHHHHHHHhCCCeEEEEEcCC
Q 011789 243 KIP-FITMGPISLNKFSDRVVATSLWSESDCSQWLDKQPKGSVLYVSFGSYAHVSKRDLIEIANGIAKSKVTFIWILRPD 321 (477)
Q Consensus 243 ~~p-~~~vGp~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~I~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~ 321 (477)
..| +++|||+........ ..+++++.+||+.++++++|||||||+...+.+.+.+++.+|+..+++|||+++..
T Consensus 238 ~~~~v~~vGPl~~~~~~~~-----~~~~~~~~~wLd~~~~~~vVyvsfGS~~~~~~~~~~el~~~l~~~~~~flw~~~~~ 312 (454)
T 3hbf_A 238 KFKLLLNVGPFNLTTPQRK-----VSDEHGCLEWLDQHENSSVVYISFGSVVTPPPHELTALAESLEECGFPFIWSFRGD 312 (454)
T ss_dssp TSSCEEECCCHHHHSCCSC-----CCCTTCHHHHHHTSCTTCEEEEECCSSCCCCHHHHHHHHHHHHHHCCCEEEECCSC
T ss_pred cCCCEEEECCccccccccc-----ccchHHHHHHHhcCCCCceEEEecCCCCcCCHHHHHHHHHHHHhCCCeEEEEeCCc
Confidence 888 999999976432110 00117899999998889999999999988888899999999999999999999865
Q ss_pred CCCCCCCCCCchhHHHhcCCCeEEEeeccHHHhhccCCCCccccccCCchhhHHHhcCcceeccccccchhhHHHHHHhh
Q 011789 322 IVSSDDPNPLPEDFKKEVADRSMIITWCCQTSVLAHPAIGGFLTHCGWNSVLEGLWCGVPLLCFPLYTDQFTNRKLAVDD 401 (477)
Q Consensus 322 ~~~~~~~~~lp~~~~~~~~~nv~v~~~~p~~~lL~~~~~~~~ItHgG~gs~~eal~~GvP~v~~P~~~DQ~~na~~v~~~ 401 (477)
. ...+|++|.++.++|+++++|+||.++|+|+++++|||||||||++|++++|||+|++|++.||+.||+++++.
T Consensus 313 ~-----~~~lp~~~~~~~~~~~~vv~w~Pq~~vL~h~~v~~fvtH~G~~S~~Eal~~GvP~i~~P~~~DQ~~Na~~v~~~ 387 (454)
T 3hbf_A 313 P-----KEKLPKGFLERTKTKGKIVAWAPQVEILKHSSVGVFLTHSGWNSVLECIVGGVPMISRPFFGDQGLNTILTESV 387 (454)
T ss_dssp H-----HHHSCTTHHHHTTTTEEEESSCCHHHHHHSTTEEEEEECCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHTT
T ss_pred c-----hhcCCHhHHhhcCCceEEEeeCCHHHHHhhcCcCeEEecCCcchHHHHHHcCCCEecCcccccHHHHHHHHHHh
Confidence 2 24588999999999999999999999999999888999999999999999999999999999999999999995
Q ss_pred hcceeeecCCC-CcCHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHH
Q 011789 402 WNVGLNLSNEK-VITKEEVSKNVHLLMGEKSGAKYRNAAKQVKKAMEYALQPNGSSDKNMDQFIKDLK 468 (477)
Q Consensus 402 ~G~G~~~~~~~-~~~~~~l~~~i~~~l~~~~~~~~~~~a~~l~~~~~~~~~~gg~~~~~~~~~~~~~~ 468 (477)
||+|+.+. + .++.++|.++|+++|+|++|++||+||+++++++++++++||||.+++++||+++.
T Consensus 388 ~g~Gv~l~--~~~~~~~~l~~av~~ll~~~~~~~~r~~a~~l~~~~~~a~~~gGsS~~~l~~~v~~i~ 453 (454)
T 3hbf_A 388 LEIGVGVD--NGVLTKESIKKALELTMSSEKGGIMRQKIVKLKESAFKAVEQNGTSAMDFTTLIQIVT 453 (454)
T ss_dssp SCSEEECG--GGSCCHHHHHHHHHHHHSSHHHHHHHHHHHHHHHHHHHHTSTTSHHHHHHHHHHHHHT
T ss_pred hCeeEEec--CCCCCHHHHHHHHHHHHCCChHHHHHHHHHHHHHHHHHhhccCCCHHHHHHHHHHHHh
Confidence 69999994 3 89999999999999998777899999999999999999999999999999999875
No 2
>2pq6_A UDP-glucuronosyl/UDP-glucosyltransferase; glycosylation, isoflavonoid, uridine diphosphate glycosyltransferase; 2.10A {Medicago truncatula} SCOP: c.87.1.10
Probab=100.00 E-value=3.4e-65 Score=523.54 Aligned_cols=454 Identities=33% Similarity=0.620 Sum_probs=347.6
Q ss_pred CCCCCCCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCcchhhh-ccCCCCCCccccccccCC-CCCeEEEec
Q 011789 1 MAGNKTQKPHAIFISYPLQGHVNPSVQLALKLASQGFTITFVNTHFIHQQM-TKASPEMGSDIFAGVRKS-GLDIRYMTL 78 (477)
Q Consensus 1 ~~~~~~~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~-~~~~~~~~l 78 (477)
|+....+++||+++|++++||++|++.||++|++|||+|||++++.+...+ ..... .+.. .++++|..+
T Consensus 1 ~~~~~~~~~~vl~~p~p~~GHi~P~l~La~~L~~rG~~VT~v~t~~~~~~~~~~~~~---------~~~~~~~~i~~~~l 71 (482)
T 2pq6_A 1 MGNFANRKPHVVMIPYPVQGHINPLFKLAKLLHLRGFHITFVNTEYNHKRLLKSRGP---------KAFDGFTDFNFESI 71 (482)
T ss_dssp -------CCEEEEECCSSHHHHHHHHHHHHHHHHTTCEEEEEEEHHHHHHHC---------------------CEEEEEE
T ss_pred CCcccCCCCEEEEecCccchhHHHHHHHHHHHHhCCCeEEEEeCCchhhhhcccccc---------ccccCCCceEEEEC
Confidence 666667778999999999999999999999999999999999999887766 32000 0000 027999999
Q ss_pred CCCCCCC---CCCCCcHHHHHHHHHHHhHHHHHHHHHHhHhc--CCCccEEEecCCCcchHHHHHHhCCceEEEecchhH
Q 011789 79 SDGLPLG---FDRSLNHEQFMSSLLHVFSAHAEEVIGQIVRS--GENVHCLIADTYFVWPSKLAKKFGLYYISFWTESAL 153 (477)
Q Consensus 79 ~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~--~~~pD~iI~D~~~~~~~~~A~~~gIP~v~~~~~~~~ 153 (477)
+++++.. .....++..++..+...+.+.++++++.+..+ ..+||+||+|.++.|+..+|+++|||++.++++++.
T Consensus 72 ~~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~l~~~~~~~~~d~vI~D~~~~~~~~vA~~lgiP~v~~~~~~~~ 151 (482)
T 2pq6_A 72 PDGLTPMEGDGDVSQDVPTLCQSVRKNFLKPYCELLTRLNHSTNVPPVTCLVSDCCMSFTIQAAEEFELPNVLYFSSSAC 151 (482)
T ss_dssp CCCCC---------CCHHHHHHHHTTSSHHHHHHHHHHHHTCSSSCCCCEEEEETTCTHHHHHHHHTTCCEEEEECSCHH
T ss_pred CCCCCCcccccCcchhHHHHHHHHHHHhhHHHHHHHHHHhhhccCCCceEEEECCcchhHHHHHHHcCCCEEEEecccHH
Confidence 9876652 11223455555555456677888888887532 248999999999999999999999999999999988
Q ss_pred HHHHHhhhhhhhhcCCcCCCCCC-------CCcccccCCCCCCCCCCCccccccCCCchhHHHHHHHHhhhccCCcEEEE
Q 011789 154 VFTLYYHLDLLTINGHFQCYDCR-------EDTIDYIPGVKAINPKDTTSYLQETDTTSACHQIIFNSFQDTRNADYVLC 226 (477)
Q Consensus 154 ~~~~~~~~~~~~~~~~~p~~~~~-------~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 226 (477)
....+.+++.+...++.|..... .....++|+++.++...+..++......+.+.+.+....+...+++.+|+
T Consensus 152 ~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vl~ 231 (482)
T 2pq6_A 152 SLLNVMHFRSFVERGIIPFKDESYLTNGCLETKVDWIPGLKNFRLKDIVDFIRTTNPNDIMLEFFIEVADRVNKDTTILL 231 (482)
T ss_dssp HHHHHTTHHHHHHTTCSSCSSGGGGTSSGGGCBCCSSTTCCSCBGGGSCGGGCCSCTTCHHHHHHHHHHHTCCTTCCEEE
T ss_pred HHHHHHHHHHHHhcCCCCCccccccccccccCccccCCCCCCCchHHCchhhccCCcccHHHHHHHHHHHhhccCCEEEE
Confidence 77766666655555666654321 11223456665555555555544333334455555555666778899999
Q ss_pred cchhhccHHHHHHHHccCC-EEEeCccCCC-CCCc--c---ccccccCCc-cccchhhccCCCCcEEEEEecccccCCHH
Q 011789 227 NTVHELESEAVTALKAKIP-FITMGPISLN-KFSD--R---VVATSLWSE-SDCSQWLDKQPKGSVLYVSFGSYAHVSKR 298 (477)
Q Consensus 227 ~s~~~l~~~~~~~~~~~~p-~~~vGp~~~~-~~~~--~---~~~~~~~~~-~~l~~~l~~~~~~~~I~vs~Gs~~~~~~~ 298 (477)
|++++||++.++.+++.+| +++|||+... .... . ......|.+ .++.+||+.++++++|||||||+...+.+
T Consensus 232 nt~~~le~~~~~~~~~~~~~v~~VGPl~~~~~~~~~~~~~~~~~~~l~~~~~~~~~wld~~~~~~vv~vs~GS~~~~~~~ 311 (482)
T 2pq6_A 232 NTFNELESDVINALSSTIPSIYPIGPLPSLLKQTPQIHQLDSLDSNLWKEDTECLDWLESKEPGSVVYVNFGSTTVMTPE 311 (482)
T ss_dssp SSCGGGGHHHHHHHHTTCTTEEECCCHHHHHHTSTTGGGGCC---------CHHHHHHTTSCTTCEEEEECCSSSCCCHH
T ss_pred cChHHHhHHHHHHHHHhCCcEEEEcCCcccccccccccccccccccccccchHHHHHHhcCCCCceEEEecCCcccCCHH
Confidence 9999999998888888878 9999999753 1110 0 000122333 56899999988889999999999877888
Q ss_pred HHHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCchhHHHhcCCCeEEEeeccHHHhhccCCCCccccccCCchhhHHHhc
Q 011789 299 DLIEIANGIAKSKVTFIWILRPDIVSSDDPNPLPEDFKKEVADRSMIITWCCQTSVLAHPAIGGFLTHCGWNSVLEGLWC 378 (477)
Q Consensus 299 ~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~lp~~~~~~~~~nv~v~~~~p~~~lL~~~~~~~~ItHgG~gs~~eal~~ 378 (477)
.+.+++.+|+..+.+|||+++.+... .+...+|++|.++.++|+++++|+||.++|+|+++++||||||+||++|++++
T Consensus 312 ~~~~~~~~l~~~~~~~l~~~~~~~~~-~~~~~l~~~~~~~~~~~~~v~~~~pq~~~L~h~~~~~~vth~G~~s~~Eal~~ 390 (482)
T 2pq6_A 312 QLLEFAWGLANCKKSFLWIIRPDLVI-GGSVIFSSEFTNEIADRGLIASWCPQDKVLNHPSIGGFLTHCGWNSTTESICA 390 (482)
T ss_dssp HHHHHHHHHHHTTCEEEEECCGGGST-TTGGGSCHHHHHHHTTTEEEESCCCHHHHHTSTTEEEEEECCCHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCCcEEEEEcCCccc-cccccCcHhHHHhcCCCEEEEeecCHHHHhcCCCCCEEEecCCcchHHHHHHc
Confidence 89999999999999999999854210 01123789998889999999999999999999999999999999999999999
Q ss_pred CcceeccccccchhhHHHHHH-hhhcceeeecCCC-CcCHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHhcCCCch
Q 011789 379 GVPLLCFPLYTDQFTNRKLAV-DDWNVGLNLSNEK-VITKEEVSKNVHLLMGEKSGAKYRNAAKQVKKAMEYALQPNGSS 456 (477)
Q Consensus 379 GvP~v~~P~~~DQ~~na~~v~-~~~G~G~~~~~~~-~~~~~~l~~~i~~~l~~~~~~~~~~~a~~l~~~~~~~~~~gg~~ 456 (477)
|||+|++|++.||+.||++++ +. |+|+.+ + .++.++|.++|+++|+|+++++||+||++++++++++.++||++
T Consensus 391 GvP~i~~P~~~dQ~~na~~~~~~~-G~g~~l---~~~~~~~~l~~~i~~ll~~~~~~~~r~~a~~l~~~~~~a~~~gGss 466 (482)
T 2pq6_A 391 GVPMLCWPFFADQPTDCRFICNEW-EIGMEI---DTNVKREELAKLINEVIAGDKGKKMKQKAMELKKKAEENTRPGGCS 466 (482)
T ss_dssp TCCEEECCCSTTHHHHHHHHHHTS-CCEEEC---CSSCCHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHTSTTCHH
T ss_pred CCCEEecCcccchHHHHHHHHHHh-CEEEEE---CCCCCHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHhcCCcH
Confidence 999999999999999999997 57 999999 5 79999999999999999867779999999999999999999999
Q ss_pred HHHHHHHHHHHH
Q 011789 457 DKNMDQFIKDLK 468 (477)
Q Consensus 457 ~~~~~~~~~~~~ 468 (477)
.+++++|+++++
T Consensus 467 ~~~l~~~v~~~~ 478 (482)
T 2pq6_A 467 YMNLNKVIKDVL 478 (482)
T ss_dssp HHHHHHHHHHTT
T ss_pred HHHHHHHHHHHH
Confidence 999999999874
No 3
>2c1x_A UDP-glucose flavonoid 3-O glycosyltransferase; WINE, catalysis, glycosylation; HET: UDP B3P; 1.9A {Vitis vinifera} SCOP: c.87.1.10 PDB: 2c1z_A* 2c9z_A*
Probab=100.00 E-value=3.8e-63 Score=503.60 Aligned_cols=444 Identities=25% Similarity=0.491 Sum_probs=333.9
Q ss_pred CCCCCCCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCe--EEEEeCCcchhhh-ccCCCCCCccccccccCCCCCeEEEe
Q 011789 1 MAGNKTQKPHAIFISYPLQGHVNPSVQLALKLASQGFT--ITFVNTHFIHQQM-TKASPEMGSDIFAGVRKSGLDIRYMT 77 (477)
Q Consensus 1 ~~~~~~~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~--Vt~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~ 77 (477)
|+. ..+++||+++|+|++||++|++.||++|++|||+ ||+++++.....+ ..... ...+++++..
T Consensus 1 m~~-~~~~~hvv~~p~p~~GHi~P~l~la~~L~~rGh~v~vt~~~t~~~~~~~~~~~~~-----------~~~~~i~~~~ 68 (456)
T 2c1x_A 1 MSQ-TTTNPHVAVLAFPFSTHAAPLLAVVRRLAAAAPHAVFSFFSTSQSNASIFHDSMH-----------TMQCNIKSYD 68 (456)
T ss_dssp -------CCEEEEECCCSSSSHHHHHHHHHHHHHHCTTSEEEEEECHHHHHHHC------------------CTTEEEEE
T ss_pred CCC-CCCCCEEEEEcCcccchHHHHHHHHHHHHhCCCCeEEEEEeCchhHHHhhccccc-----------cCCCceEEEe
Confidence 455 3456899999999999999999999999999755 5778887655544 32110 0012799999
Q ss_pred cCCCCCCCCCCCCcHHHHHHHHHHHhHHHHHHHHHHhHhc-CCCccEEEecCCCcchHHHHHHhCCceEEEecchhHHHH
Q 011789 78 LSDGLPLGFDRSLNHEQFMSSLLHVFSAHAEEVIGQIVRS-GENVHCLIADTYFVWPSKLAKKFGLYYISFWTESALVFT 156 (477)
Q Consensus 78 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~-~~~pD~iI~D~~~~~~~~~A~~~gIP~v~~~~~~~~~~~ 156 (477)
++++++.+.+........+..+...+...++++++.+.++ +.+||+||+|.++.|+..+|+++|||++.++++++..+.
T Consensus 69 i~~glp~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~d~vI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~~~ 148 (456)
T 2c1x_A 69 ISDGVPEGYVFAGRPQEDIELFTRAAPESFRQGMVMAVAETGRPVSCLVADAFIWFAADMAAEMGVAWLPFWTAGPNSLS 148 (456)
T ss_dssp CCCCCCTTCCCCCCTTHHHHHHHHHHHHHHHHHHHHHHHHHTCCCCEEEEETTSTTHHHHHHHHTCEEEEEECSCHHHHH
T ss_pred CCCCCCCcccccCChHHHHHHHHHHhHHHHHHHHHHHHhccCCCceEEEECCchHhHHHHHHHhCCCEEEEeCccHHHHH
Confidence 9987776532222223333333344444555555544321 248999999999999999999999999999999888776
Q ss_pred HHhhhhhhhhc-CCcCCCCCCCCcccccCCCCCCCCCCCccccccCCCchhHHHHHHHHhhhccCCcEEEEcchhhccHH
Q 011789 157 LYYHLDLLTIN-GHFQCYDCREDTIDYIPGVKAINPKDTTSYLQETDTTSACHQIIFNSFQDTRNADYVLCNTVHELESE 235 (477)
Q Consensus 157 ~~~~~~~~~~~-~~~p~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~l~~~ 235 (477)
.+.+.+..... +..+..........++|++++.+.+++...+........+.+.+.+..+...+++.+++|++++||++
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~pg~~~~~~~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~vl~ns~~~le~~ 228 (456)
T 2c1x_A 149 THVYIDEIREKIGVSGIQGREDELLNFIPGMSKVRFRDLQEGIVFGNLNSLFSRMLHRMGQVLPKATAVFINSFEELDDS 228 (456)
T ss_dssp HHHTHHHHHHHHCSSCCTTCTTCBCTTSTTCTTCBGGGSCTTTSSSCTTSHHHHHHHHHHHHGGGSSCEEESSCGGGCHH
T ss_pred HHhhhHHHHhccCCcccccccccccccCCCCCcccHHhCchhhcCCCcccHHHHHHHHHHHhhhhCCEEEECChHHHhHH
Confidence 55444322111 21111011122234677776655555554332222222344444444455677899999999999999
Q ss_pred HHHHHHccCC-EEEeCccCCCCCCccccccccCCc-cccchhhccCCCCcEEEEEecccccCCHHHHHHHHHHHHhCCCe
Q 011789 236 AVTALKAKIP-FITMGPISLNKFSDRVVATSLWSE-SDCSQWLDKQPKGSVLYVSFGSYAHVSKRDLIEIANGIAKSKVT 313 (477)
Q Consensus 236 ~~~~~~~~~p-~~~vGp~~~~~~~~~~~~~~~~~~-~~l~~~l~~~~~~~~I~vs~Gs~~~~~~~~~~~~~~al~~~~~~ 313 (477)
.+..+++..| +++|||+....... .+.+ .++.+|++.++++++|||||||....+.+.+.+++.+++..+.+
T Consensus 229 ~~~~~~~~~~~~~~vGpl~~~~~~~------~~~~~~~~~~wl~~~~~~~vv~vs~GS~~~~~~~~~~~~~~~l~~~~~~ 302 (456)
T 2c1x_A 229 LTNDLKSKLKTYLNIGPFNLITPPP------VVPNTTGCLQWLKERKPTSVVYISFGTVTTPPPAEVVALSEALEASRVP 302 (456)
T ss_dssp HHHHHHHHSSCEEECCCHHHHC---------------CHHHHHHTSCTTCEEEEECCSSCCCCHHHHHHHHHHHHHHTCC
T ss_pred HHHHHHhcCCCEEEecCcccCcccc------cccchhhHHHHHhcCCCcceEEEecCccccCCHHHHHHHHHHHHhcCCe
Confidence 8888888888 99999997643211 0111 56889999988889999999999877788899999999999999
Q ss_pred EEEEEcCCCCCCCCCCCCchhHHHhcCCCeEEEeeccHHHhhccCCCCccccccCCchhhHHHhcCcceeccccccchhh
Q 011789 314 FIWILRPDIVSSDDPNPLPEDFKKEVADRSMIITWCCQTSVLAHPAIGGFLTHCGWNSVLEGLWCGVPLLCFPLYTDQFT 393 (477)
Q Consensus 314 ~i~~~~~~~~~~~~~~~lp~~~~~~~~~nv~v~~~~p~~~lL~~~~~~~~ItHgG~gs~~eal~~GvP~v~~P~~~DQ~~ 393 (477)
|||+++... ...+|++|.++.++|+++++|+||.++|+|+++++|||||||||++||+++|||+|++|++.||+.
T Consensus 303 ~lw~~~~~~-----~~~l~~~~~~~~~~~~~v~~w~pq~~vL~h~~~~~fvth~G~~S~~Eal~~GvP~i~~P~~~dQ~~ 377 (456)
T 2c1x_A 303 FIWSLRDKA-----RVHLPEGFLEKTRGYGMVVPWAPQAEVLAHEAVGAFVTHCGWNSLWESVAGGVPLICRPFFGDQRL 377 (456)
T ss_dssp EEEECCGGG-----GGGSCTTHHHHHTTTEEEESCCCHHHHHTSTTEEEEEECCCHHHHHHHHHHTCCEEECCCSTTHHH
T ss_pred EEEEECCcc-----hhhCCHHHHhhcCCceEEecCCCHHHHhcCCcCCEEEecCCcchHHHHHHhCceEEecCChhhHHH
Confidence 999998652 235788888888899999999999999999998999999999999999999999999999999999
Q ss_pred HHHHHHhhhcceeeecCCC-CcCHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHH
Q 011789 394 NRKLAVDDWNVGLNLSNEK-VITKEEVSKNVHLLMGEKSGAKYRNAAKQVKKAMEYALQPNGSSDKNMDQFIKDLKT 469 (477)
Q Consensus 394 na~~v~~~~G~G~~~~~~~-~~~~~~l~~~i~~~l~~~~~~~~~~~a~~l~~~~~~~~~~gg~~~~~~~~~~~~~~~ 469 (477)
||+++++.||+|+.+. + .++.++|.++|+++|+|+++++|++||++++++++++..+||||.+++++|++++++
T Consensus 378 Na~~l~~~~g~g~~l~--~~~~~~~~l~~~i~~ll~~~~~~~~r~~a~~l~~~~~~a~~~gGsS~~~l~~~v~~~~~ 452 (456)
T 2c1x_A 378 NGRMVEDVLEIGVRIE--GGVFTKSGLMSCFDQILSQEKGKKLRENLRALRETADRAVGPKGSSTENFITLVDLVSK 452 (456)
T ss_dssp HHHHHHHTSCCEEECG--GGSCCHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHTSTTCHHHHHHHHHHHHHTS
T ss_pred HHHHHHHHhCeEEEec--CCCcCHHHHHHHHHHHHCCCcHHHHHHHHHHHHHHHHHhhhcCCcHHHHHHHHHHHHHh
Confidence 9999999999999994 3 799999999999999987677899999999999999999999999999999998853
No 4
>2vch_A Hydroquinone glucosyltransferase; glycosyltransferase, N-glucosyltransferase, UDP-glucose- dependent, plant glycosyltransferase; HET: UDP; 1.45A {Arabidopsis thaliana} SCOP: c.87.1.10 PDB: 2vce_A* 2vg8_A*
Probab=100.00 E-value=1.3e-60 Score=488.02 Aligned_cols=442 Identities=30% Similarity=0.460 Sum_probs=330.7
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHhC-CCeEEEEeCCcc--hhhhccCCCCCCccccccccCCCCCeEEEecCCCC
Q 011789 6 TQKPHAIFISYPLQGHVNPSVQLALKLASQ-GFTITFVNTHFI--HQQMTKASPEMGSDIFAGVRKSGLDIRYMTLSDGL 82 (477)
Q Consensus 6 ~~~~~il~~~~~~~GH~~p~l~La~~L~~r-Gh~Vt~~~~~~~--~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 82 (477)
.+++||+++|+|++||++|++.||++|++| ||+|||++++.. ...+..... ....+++|+.+++..
T Consensus 4 ~~~~~vl~~p~p~~GHv~P~l~La~~L~~r~Gh~Vt~~t~~~~~~~~~~~~~~~-----------~~~~~i~~~~l~~~~ 72 (480)
T 2vch_A 4 SKTPHVAIIPSPGMGHLIPLVEFAKRLVHLHGLTVTFVIAGEGPPSKAQRTVLD-----------SLPSSISSVFLPPVD 72 (480)
T ss_dssp --CCEEEEECCSCHHHHHHHHHHHHHHHHHHCCEEEEEECCSSSCC-CHHHHHC------------CCTTEEEEECCCCC
T ss_pred CCCcEEEEecCcchhHHHHHHHHHHHHHhCCCCEEEEEECCCcchhhhhhhhcc-----------ccCCCceEEEcCCCC
Confidence 455899999999999999999999999998 999999999873 444321000 111289999998643
Q ss_pred CCCCCCCCcHHHHHHHHHHHhHHHHHHHHHHhHhcCCCc-cEEEecCCCcchHHHHHHhCCceEEEecchhHHHHHHhhh
Q 011789 83 PLGFDRSLNHEQFMSSLLHVFSAHAEEVIGQIVRSGENV-HCLIADTYFVWPSKLAKKFGLYYISFWTESALVFTLYYHL 161 (477)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~p-D~iI~D~~~~~~~~~A~~~gIP~v~~~~~~~~~~~~~~~~ 161 (477)
........+....+........+.++++++.+.. ..++ |+||+|.++.|+..+|+++|||++.++++++..+..+.++
T Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~~~-~~~~pd~vI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~~~~~~~~ 151 (480)
T 2vch_A 73 LTDLSSSTRIESRISLTVTRSNPELRKVFDSFVE-GGRLPTALVVDLFGTDAFDVAVEFHVPPYIFYPTTANVLSFFLHL 151 (480)
T ss_dssp CTTSCTTCCHHHHHHHHHHTTHHHHHHHHHHHHH-TTCCCSEEEECTTCGGGHHHHHHTTCCEEEEECSCHHHHHHHHHH
T ss_pred CCCCCCchhHHHHHHHHHHhhhHHHHHHHHHhcc-CCCCCeEEEECCcchhHHHHHHHcCCCEEEEECccHHHHHHHHHH
Confidence 2111112233333333345566777888777632 1378 9999999988999999999999999999998877776665
Q ss_pred hhhhhcCCcCCCCCCCCcccccCCCCCCCCCCCccccccCCCchhHHHHHHHHhhhccCCcEEEEcchhhccHHHHHHHH
Q 011789 162 DLLTINGHFQCYDCREDTIDYIPGVKAINPKDTTSYLQETDTTSACHQIIFNSFQDTRNADYVLCNTVHELESEAVTALK 241 (477)
Q Consensus 162 ~~~~~~~~~p~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~l~~~~~~~~~ 241 (477)
+........++.. ......+|++++.....+...+..+ .......+.+....+++...+++|++++|+++.....+
T Consensus 152 ~~~~~~~~~~~~~--~~~~~~~Pg~~p~~~~~l~~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~nt~~ele~~~~~~l~ 227 (480)
T 2vch_A 152 PKLDETVSCEFRE--LTEPLMLPGCVPVAGKDFLDPAQDR--KDDAYKWLLHNTKRYKEAEGILVNTFFELEPNAIKALQ 227 (480)
T ss_dssp HHHHHHCCSCGGG--CSSCBCCTTCCCBCGGGSCGGGSCT--TSHHHHHHHHHHHHGGGCSEEEESCCTTTSHHHHHHHH
T ss_pred HHHHhcCCCcccc--cCCcccCCCCCCCChHHCchhhhcC--CchHHHHHHHHHHhcccCCEEEEcCHHHHhHHHHHHHH
Confidence 5433222112110 0112345666555544444443321 12244444445555667788899999999988776665
Q ss_pred c---cCC-EEEeCccCCCCCCccccccccCCc-cccchhhccCCCCcEEEEEecccccCCHHHHHHHHHHHHhCCCeEEE
Q 011789 242 A---KIP-FITMGPISLNKFSDRVVATSLWSE-SDCSQWLDKQPKGSVLYVSFGSYAHVSKRDLIEIANGIAKSKVTFIW 316 (477)
Q Consensus 242 ~---~~p-~~~vGp~~~~~~~~~~~~~~~~~~-~~l~~~l~~~~~~~~I~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~ 316 (477)
+ .+| +++|||+........ .+.. .++.+||+.++++++|||||||+...+.+.+.+++.+|+..+++|||
T Consensus 228 ~~~~~~~~v~~vGpl~~~~~~~~-----~~~~~~~~~~wLd~~~~~~vvyvs~GS~~~~~~~~~~~~~~al~~~~~~~lw 302 (480)
T 2vch_A 228 EPGLDKPPVYPVGPLVNIGKQEA-----KQTEESECLKWLDNQPLGSVLYVSFGSGGTLTCEQLNELALGLADSEQRFLW 302 (480)
T ss_dssp SCCTTCCCEEECCCCCCCSCSCC----------CHHHHHHHTSCTTCEEEEECTTTCCCCHHHHHHHHHHHHHTTCEEEE
T ss_pred hcccCCCcEEEEecccccccccc-----CccchhHHHHHhcCCCCCceEEEecccccCCCHHHHHHHHHHHHhcCCcEEE
Confidence 3 246 999999987532110 0111 78899999988889999999999888889999999999999999999
Q ss_pred EEcCCCCCC----------CCC-CCCchhHHHhcCCCeEEEe-eccHHHhhccCCCCccccccCCchhhHHHhcCcceec
Q 011789 317 ILRPDIVSS----------DDP-NPLPEDFKKEVADRSMIIT-WCCQTSVLAHPAIGGFLTHCGWNSVLEGLWCGVPLLC 384 (477)
Q Consensus 317 ~~~~~~~~~----------~~~-~~lp~~~~~~~~~nv~v~~-~~p~~~lL~~~~~~~~ItHgG~gs~~eal~~GvP~v~ 384 (477)
+++...... .+. ..+|++|.++..++.+++. |+||.+||+|+++++|||||||||++||+++|||||+
T Consensus 303 ~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~g~~v~~w~Pq~~vL~h~~v~~fvtHgG~~S~~Eal~~GvP~i~ 382 (480)
T 2vch_A 303 VIRSPSGIANSSYFDSHSQTDPLTFLPPGFLERTKKRGFVIPFWAPQAQVLAHPSTGGFLTHCGWNSTLESVVSGIPLIA 382 (480)
T ss_dssp EECCCCSSTTTTTTCC--CSCGGGGSCTTHHHHTTTTEEEEESCCCHHHHHHSTTEEEEEECCCHHHHHHHHHHTCCEEE
T ss_pred EECCccccccccccccccccchhhhcCHHHHHHhCCCeEEEeCccCHHHHhCCCCcCeEEecccchhHHHHHHcCCCEEe
Confidence 998653100 011 2588899888877777776 9999999999999999999999999999999999999
Q ss_pred cccccchhhHHHHH-HhhhcceeeecCCC--CcCHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHhcCCCchHHHHH
Q 011789 385 FPLYTDQFTNRKLA-VDDWNVGLNLSNEK--VITKEEVSKNVHLLMGEKSGAKYRNAAKQVKKAMEYALQPNGSSDKNMD 461 (477)
Q Consensus 385 ~P~~~DQ~~na~~v-~~~~G~G~~~~~~~--~~~~~~l~~~i~~~l~~~~~~~~~~~a~~l~~~~~~~~~~gg~~~~~~~ 461 (477)
+|++.||+.||+++ ++. |+|+.+..++ .++.++|+++|+++|+++++++||+||+++++++++++.+||++.++++
T Consensus 383 ~P~~~DQ~~na~~l~~~~-G~g~~l~~~~~~~~~~~~l~~av~~vl~~~~~~~~r~~a~~l~~~~~~a~~~gGss~~~~~ 461 (480)
T 2vch_A 383 WPLYAEQKMNAVLLSEDI-RAALRPRAGDDGLVRREEVARVVKGLMEGEEGKGVRNKMKELKEAACRVLKDDGTSTKALS 461 (480)
T ss_dssp CCCSTTHHHHHHHHHHTT-CCEECCCCCTTSCCCHHHHHHHHHHHHTSTHHHHHHHHHHHHHHHHHHHTSTTSHHHHHHH
T ss_pred ccccccchHHHHHHHHHh-CeEEEeecccCCccCHHHHHHHHHHHhcCcchHHHHHHHHHHHHHHHHHHhcCCCHHHHHH
Confidence 99999999999997 577 9999994321 4899999999999998554559999999999999999999999999999
Q ss_pred HHHHHHHH
Q 011789 462 QFIKDLKT 469 (477)
Q Consensus 462 ~~~~~~~~ 469 (477)
+|++++++
T Consensus 462 ~~v~~~~~ 469 (480)
T 2vch_A 462 LVALKWKA 469 (480)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 99999976
No 5
>2acv_A Triterpene UDP-glucosyl transferase UGT71G1; glycosyltransferase; HET: UDP; 2.00A {Medicago truncatula} SCOP: c.87.1.10 PDB: 2acw_A*
Probab=100.00 E-value=1.8e-58 Score=470.39 Aligned_cols=429 Identities=27% Similarity=0.436 Sum_probs=327.0
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHhC--CCeEEEEeCCcchh-----hhccCCCCCCccccccccCCCCCeEEEec
Q 011789 6 TQKPHAIFISYPLQGHVNPSVQLALKLASQ--GFTITFVNTHFIHQ-----QMTKASPEMGSDIFAGVRKSGLDIRYMTL 78 (477)
Q Consensus 6 ~~~~~il~~~~~~~GH~~p~l~La~~L~~r--Gh~Vt~~~~~~~~~-----~~~~g~~~~~~~~~~~~~~~~~~~~~~~l 78 (477)
.+++||+++|+|++||++|++.||++|++| ||+|||++++.+.. .+.... ....+++|..+
T Consensus 7 ~~~~~vv~~p~p~~GHi~P~l~La~~L~~r~pG~~Vt~v~t~~~~~~~~~~~~~~~~------------~~~~~i~~~~l 74 (463)
T 2acv_A 7 NKNSELIFIPAPGIGHLASALEFAKLLTNHDKNLYITVFCIKFPGMPFADSYIKSVL------------ASQPQIQLIDL 74 (463)
T ss_dssp HHCEEEEEECCSSTTTHHHHHHHHHHHHHTCTTEEEEEEECCCTTCCCCHHHHHHHH------------CSCTTEEEEEC
T ss_pred CCCCEEEEEcCcccchHHHHHHHHHHHHhcCCCcEEEEEEcCCcchhhhhhhhhhcc------------cCCCCceEEEC
Confidence 356899999999999999999999999999 99999999987632 221100 11128999999
Q ss_pred CCCCCCCCCCCCcHHHHHHHHHHHhHHHHHHHHHHhHhcCCCccEEEecCCCcchHHHHHHhCCceEEEecchhHHHHHH
Q 011789 79 SDGLPLGFDRSLNHEQFMSSLLHVFSAHAEEVIGQIVRSGENVHCLIADTYFVWPSKLAKKFGLYYISFWTESALVFTLY 158 (477)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~pD~iI~D~~~~~~~~~A~~~gIP~v~~~~~~~~~~~~~ 158 (477)
|++.....+...+....+........+.++++++.+. +.+||+||+|.++.|+..+|+++|||++.++++++..+..+
T Consensus 75 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~--~~~~d~vI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~~~~~ 152 (463)
T 2acv_A 75 PEVEPPPQELLKSPEFYILTFLESLIPHVKATIKTIL--SNKVVGLVLDFFCVSMIDVGNEFGIPSYLFLTSNVGFLSLM 152 (463)
T ss_dssp CCCCCCCGGGGGSHHHHHHHHHHHTHHHHHHHHHHHC--CTTEEEEEEEGGGGGGHHHHHHTTCCEEEEESSCHHHHHHH
T ss_pred CCCCCCcccccCCccHHHHHHHHhhhHHHHHHHHhcc--CCCCeEEEECCcchhHHHHHHHcCCCEEEEeCchHHHHHHH
Confidence 9763112111112211133333566677888887752 24899999999988999999999999999999998887776
Q ss_pred hhhhhhhhcCCcCCCCCCCCc---ccccCCC-CCCCCCCCccccccCCCchhHHHHHHHHhhhccCCcEEEEcchhhccH
Q 011789 159 YHLDLLTINGHFQCYDCREDT---IDYIPGV-KAINPKDTTSYLQETDTTSACHQIIFNSFQDTRNADYVLCNTVHELES 234 (477)
Q Consensus 159 ~~~~~~~~~~~~p~~~~~~~~---~~~~p~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~l~~ 234 (477)
.+++..... .++.. ... ...+|++ +++...++...+..+ ......+.+.......++.+++|++++||+
T Consensus 153 ~~~~~~~~~--~~~~~--~~~~~~~~~~pg~~~~~~~~~l~~~~~~~---~~~~~~~~~~~~~~~~~~~~l~nt~~ele~ 225 (463)
T 2acv_A 153 LSLKNRQIE--EVFDD--SDRDHQLLNIPGISNQVPSNVLPDACFNK---DGGYIAYYKLAERFRDTKGIIVNTFSDLEQ 225 (463)
T ss_dssp HHGGGSCTT--CCCCC--SSGGGCEECCTTCSSCEEGGGSCHHHHCT---TTHHHHHHHHHHHHTTSSEEEESCCHHHHH
T ss_pred HHHHhhccc--CCCCC--ccccCceeECCCCCCCCChHHCchhhcCC---chHHHHHHHHHHhcccCCEEEECCHHHHhH
Confidence 666543211 11111 111 3356666 554444444333322 124444455555667788899999999998
Q ss_pred HHHHHHHcc---CC-EEEeCccCCCCC-CccccccccCCc-cccchhhccCCCCcEEEEEecccc-cCCHHHHHHHHHHH
Q 011789 235 EAVTALKAK---IP-FITMGPISLNKF-SDRVVATSLWSE-SDCSQWLDKQPKGSVLYVSFGSYA-HVSKRDLIEIANGI 307 (477)
Q Consensus 235 ~~~~~~~~~---~p-~~~vGp~~~~~~-~~~~~~~~~~~~-~~l~~~l~~~~~~~~I~vs~Gs~~-~~~~~~~~~~~~al 307 (477)
+....+.+. .| +++|||+..... .... ..|.. .++.+||+.++++++|||||||+. ..+.+.+.+++.+|
T Consensus 226 ~~~~~l~~~~~p~~~v~~vGpl~~~~~~~~~~---~~~~~~~~~~~wl~~~~~~~vv~vs~GS~~~~~~~~~~~~~~~~l 302 (463)
T 2acv_A 226 SSIDALYDHDEKIPPIYAVGPLLDLKGQPNPK---LDQAQHDLILKWLDEQPDKSVVFLCFGSMGVSFGPSQIREIALGL 302 (463)
T ss_dssp HHHHHHHHHCTTSCCEEECCCCCCSSCCCBTT---BCHHHHHHHHHHHHTSCTTCEEEEECCSSCCCCCHHHHHHHHHHH
T ss_pred HHHHHHHhccccCCcEEEeCCCcccccccccc---cccccchhHHHHHhcCCCCceEEEEeccccccCCHHHHHHHHHHH
Confidence 877666552 46 999999986532 1000 00111 678999999888899999999998 77888899999999
Q ss_pred HhCCCeEEEEEcCCCCCCCCCCCCchhHHHhc--CCCeEEEeeccHHHhhccCCCCccccccCCchhhHHHhcCcceecc
Q 011789 308 AKSKVTFIWILRPDIVSSDDPNPLPEDFKKEV--ADRSMIITWCCQTSVLAHPAIGGFLTHCGWNSVLEGLWCGVPLLCF 385 (477)
Q Consensus 308 ~~~~~~~i~~~~~~~~~~~~~~~lp~~~~~~~--~~nv~v~~~~p~~~lL~~~~~~~~ItHgG~gs~~eal~~GvP~v~~ 385 (477)
+..+++|||+++.+ ...+|++|.++. ++|+++++|+||.++|+|+++++|||||||||++|++++|||+|++
T Consensus 303 ~~~~~~~l~~~~~~------~~~l~~~~~~~~~~~~~~~v~~w~pq~~vL~h~~~~~fvth~G~~s~~Eal~~GvP~i~~ 376 (463)
T 2acv_A 303 KHSGVRFLWSNSAE------KKVFPEGFLEWMELEGKGMICGWAPQVEVLAHKAIGGFVSHCGWNSILESMWFGVPILTW 376 (463)
T ss_dssp HHHTCEEEEECCCC------GGGSCTTHHHHHHHHCSEEEESSCCHHHHHHSTTEEEEEECCCHHHHHHHHHTTCCEEEC
T ss_pred HhCCCcEEEEECCC------cccCChhHHHhhccCCCEEEEccCCHHHHhCCCccCeEEecCCchhHHHHHHcCCCeeec
Confidence 99999999999753 023778888777 7899999999999999999999999999999999999999999999
Q ss_pred ccccchhhHHHHH-Hhhhcceeee-c--CCC--CcCHHHHHHHHHHHhc-CCchHHHHHHHHHHHHHHHHHhcCCCchHH
Q 011789 386 PLYTDQFTNRKLA-VDDWNVGLNL-S--NEK--VITKEEVSKNVHLLMG-EKSGAKYRNAAKQVKKAMEYALQPNGSSDK 458 (477)
Q Consensus 386 P~~~DQ~~na~~v-~~~~G~G~~~-~--~~~--~~~~~~l~~~i~~~l~-~~~~~~~~~~a~~l~~~~~~~~~~gg~~~~ 458 (477)
|++.||+.||+++ ++. |+|+.+ . .++ .++.++|.++|+++|+ ++ +||+||+++++++++++++||++.+
T Consensus 377 P~~~dQ~~Na~~lv~~~-g~g~~l~~~~~~~~~~~~~~~l~~ai~~ll~~~~---~~r~~a~~l~~~~~~a~~~gGss~~ 452 (463)
T 2acv_A 377 PIYAEQQLNAFRLVKEW-GVGLGLRVDYRKGSDVVAAEEIEKGLKDLMDKDS---IVHKKVQEMKEMSRNAVVDGGSSLI 452 (463)
T ss_dssp CCSTTHHHHHHHHHHTS-CCEEESCSSCCTTCCCCCHHHHHHHHHHHTCTTC---THHHHHHHHHHHHHHHTSTTSHHHH
T ss_pred cchhhhHHHHHHHHHHc-CeEEEEecccCCCCccccHHHHHHHHHHHHhccH---HHHHHHHHHHHHHHHHHhcCCcHHH
Confidence 9999999999995 777 999998 2 112 5899999999999997 47 8999999999999999999999999
Q ss_pred HHHHHHHHHH
Q 011789 459 NMDQFIKDLK 468 (477)
Q Consensus 459 ~~~~~~~~~~ 468 (477)
++++||++++
T Consensus 453 ~l~~~v~~~~ 462 (463)
T 2acv_A 453 SVGKLIDDIT 462 (463)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHhc
Confidence 9999999985
No 6
>2iya_A OLEI, oleandomycin glycosyltransferase; carbohydrate, glycosylation, enzyme, macrolide; HET: UDP ZIO; 1.7A {Streptomyces antibioticus}
Probab=100.00 E-value=2.8e-45 Score=370.81 Aligned_cols=382 Identities=15% Similarity=0.175 Sum_probs=260.8
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCcchhhh-ccCCCCCCccccccccCCCCCeEEEecCCCCCC
Q 011789 6 TQKPHAIFISYPLQGHVNPSVQLALKLASQGFTITFVNTHFIHQQM-TKASPEMGSDIFAGVRKSGLDIRYMTLSDGLPL 84 (477)
Q Consensus 6 ~~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 84 (477)
.+||||+|++.++.||++|+++||++|+++||+|+|++++.+.+.+ .. +++|.+++..++.
T Consensus 10 m~~~~Il~~~~~~~GHv~p~l~la~~L~~~Gh~V~~~~~~~~~~~~~~~------------------g~~~~~~~~~~~~ 71 (424)
T 2iya_A 10 VTPRHISFFNIPGHGHVNPSLGIVQELVARGHRVSYAITDEFAAQVKAA------------------GATPVVYDSILPK 71 (424)
T ss_dssp -CCCEEEEECCSCHHHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHH------------------TCEEEECCCCSCC
T ss_pred cccceEEEEeCCCCcccchHHHHHHHHHHCCCeEEEEeCHHHHHHHHhC------------------CCEEEecCccccc
Confidence 4578999999999999999999999999999999999999998777 55 6788888865443
Q ss_pred CCCC----CCcHHHHHHHHHHHhHHHHHHHHHHhHhcCCCccEEEecCCCcchHHHHHHhCCceEEEecchhHHHHHHhh
Q 011789 85 GFDR----SLNHEQFMSSLLHVFSAHAEEVIGQIVRSGENVHCLIADTYFVWPSKLAKKFGLYYISFWTESALVFTLYYH 160 (477)
Q Consensus 85 ~~~~----~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~pD~iI~D~~~~~~~~~A~~~gIP~v~~~~~~~~~~~~~~~ 160 (477)
.... ..+....+..+........+.+.+.+.+ .+||+||+|.++.++..+|+++|||++.+++.+..... +..
T Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~--~~pD~VI~d~~~~~~~~~A~~lgIP~v~~~~~~~~~~~-~~~ 148 (424)
T 2iya_A 72 ESNPEESWPEDQESAMGLFLDEAVRVLPQLEDAYAD--DRPDLIVYDIASWPAPVLGRKWDIPFVQLSPTFVAYEG-FEE 148 (424)
T ss_dssp TTCTTCCCCSSHHHHHHHHHHHHHHHHHHHHHHTTT--SCCSEEEEETTCTHHHHHHHHHTCCEEEEESSCCCCTT-HHH
T ss_pred cccchhhcchhHHHHHHHHHHHHHHHHHHHHHHHhc--cCCCEEEEcCcccHHHHHHHhcCCCEEEEecccccccc-ccc
Confidence 2111 2233333333333333344455444444 38999999998889999999999999999876542110 000
Q ss_pred hhhhhhcCCcCCCCCCCCcccccCCCCCCCCCCCcccccc-CCCchhHHHHHHHH------hhhccCCcEEEEcchhhcc
Q 011789 161 LDLLTINGHFQCYDCREDTIDYIPGVKAINPKDTTSYLQE-TDTTSACHQIIFNS------FQDTRNADYVLCNTVHELE 233 (477)
Q Consensus 161 ~~~~~~~~~~p~~~~~~~~~~~~p~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~------~~~~~~~~~~l~~s~~~l~ 233 (477)
... ....+..... .....|...... ......... ......+.+.+.+. ......++.+++++.+.|+
T Consensus 149 ~~~---~~~~~~~~~~--~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~l~ 222 (424)
T 2iya_A 149 DVP---AVQDPTADRG--EEAAAPAGTGDA-EEGAEAEDGLVRFFTRLSAFLEEHGVDTPATEFLIAPNRCIVALPRTFQ 222 (424)
T ss_dssp HSG---GGSCCCC------------------------HHHHHHHHHHHHHHHHHTTCCSCHHHHHHCCSSEEESSCTTTS
T ss_pred ccc---cccccccccc--cccccccccccc-hhhhccchhHHHHHHHHHHHHHHcCCCCCHHHhccCCCcEEEEcchhhC
Confidence 000 0000000000 000000000000 000000000 00001111111110 0111256788999999998
Q ss_pred HHHHHHHHccCC-EEEeCccCCCCCCccccccccCCccccchhhccCCCCcEEEEEecccccCCHHHHHHHHHHHHhCCC
Q 011789 234 SEAVTALKAKIP-FITMGPISLNKFSDRVVATSLWSESDCSQWLDKQPKGSVLYVSFGSYAHVSKRDLIEIANGIAKSKV 312 (477)
Q Consensus 234 ~~~~~~~~~~~p-~~~vGp~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~I~vs~Gs~~~~~~~~~~~~~~al~~~~~ 312 (477)
++. ....+ ++++||+.... .+..+|++..+++++|||++||......+.+..++++++..+.
T Consensus 223 ~~~----~~~~~~~~~vGp~~~~~-------------~~~~~~~~~~~~~~~v~v~~Gs~~~~~~~~~~~~~~al~~~~~ 285 (424)
T 2iya_A 223 IKG----DTVGDNYTFVGPTYGDR-------------SHQGTWEGPGDGRPVLLIALGSAFTDHLDFYRTCLSAVDGLDW 285 (424)
T ss_dssp TTG----GGCCTTEEECCCCCCCC-------------GGGCCCCCCCSSCCEEEEECCSSSCCCHHHHHHHHHHHTTCSS
T ss_pred CCc----cCCCCCEEEeCCCCCCc-------------ccCCCCCccCCCCCEEEEEcCCCCcchHHHHHHHHHHHhcCCc
Confidence 651 23334 99999976432 1123466655567899999999986667888899999998899
Q ss_pred eEEEEEcCCCCCCCCCCCCchhHHHhcCCCeEEEeeccHHHhhccCCCCccccccCCchhhHHHhcCcceeccccccchh
Q 011789 313 TFIWILRPDIVSSDDPNPLPEDFKKEVADRSMIITWCCQTSVLAHPAIGGFLTHCGWNSVLEGLWCGVPLLCFPLYTDQF 392 (477)
Q Consensus 313 ~~i~~~~~~~~~~~~~~~lp~~~~~~~~~nv~v~~~~p~~~lL~~~~~~~~ItHgG~gs~~eal~~GvP~v~~P~~~DQ~ 392 (477)
+++|.++.... .+.+ +..++|+++.+|+||.++|+++++ ||||||+||++||+++|||+|++|...||+
T Consensus 286 ~~~~~~g~~~~--------~~~~-~~~~~~v~~~~~~~~~~~l~~~d~--~v~~~G~~t~~Ea~~~G~P~i~~p~~~dQ~ 354 (424)
T 2iya_A 286 HVVLSVGRFVD--------PADL-GEVPPNVEVHQWVPQLDILTKASA--FITHAGMGSTMEALSNAVPMVAVPQIAEQT 354 (424)
T ss_dssp EEEEECCTTSC--------GGGG-CSCCTTEEEESSCCHHHHHTTCSE--EEECCCHHHHHHHHHTTCCEEECCCSHHHH
T ss_pred EEEEEECCcCC--------hHHh-ccCCCCeEEecCCCHHHHHhhCCE--EEECCchhHHHHHHHcCCCEEEecCccchH
Confidence 99998875421 0111 124579999999999999999998 999999999999999999999999999999
Q ss_pred hHHHHHHhhhcceeeecCCC-CcCHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHH
Q 011789 393 TNRKLAVDDWNVGLNLSNEK-VITKEEVSKNVHLLMGEKSGAKYRNAAKQVKKAMEY 448 (477)
Q Consensus 393 ~na~~v~~~~G~G~~~~~~~-~~~~~~l~~~i~~~l~~~~~~~~~~~a~~l~~~~~~ 448 (477)
.||+++++. |+|+.+. . +++.++|.++|+++|+|+ +|+++++++++++++
T Consensus 355 ~na~~l~~~-g~g~~~~--~~~~~~~~l~~~i~~ll~~~---~~~~~~~~~~~~~~~ 405 (424)
T 2iya_A 355 MNAERIVEL-GLGRHIP--RDQVTAEKLREAVLAVASDP---GVAERLAAVRQEIRE 405 (424)
T ss_dssp HHHHHHHHT-TSEEECC--GGGCCHHHHHHHHHHHHHCH---HHHHHHHHHHHHHHT
T ss_pred HHHHHHHHC-CCEEEcC--cCCCCHHHHHHHHHHHHcCH---HHHHHHHHHHHHHHh
Confidence 999999999 9999993 2 789999999999999999 999999999999985
No 7
>4amg_A Snogd; transferase, polyketide biosynthesis, GT1 family, nogalamyci; HET: MLY; 2.59A {Streptomyces nogalater} PDB: 4an4_A* 4amb_A*
Probab=100.00 E-value=4.5e-44 Score=359.02 Aligned_cols=345 Identities=18% Similarity=0.177 Sum_probs=226.6
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCcchhhhccCCCCCCccccccccCCCCCeEEEecCCCCCCC-
Q 011789 7 QKPHAIFISYPLQGHVNPSVQLALKLASQGFTITFVNTHFIHQQMTKASPEMGSDIFAGVRKSGLDIRYMTLSDGLPLG- 85 (477)
Q Consensus 7 ~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~- 85 (477)
..|||+|+++|+.||++|+++||++|++|||+|||++++.+.+.... ++.+..+..+....
T Consensus 21 ~~MRIL~~~~p~~GHv~P~l~LA~~L~~rGh~Vt~~t~~~~~~~~~~------------------g~~~~~~~~~~~~~~ 82 (400)
T 4amg_A 21 QSMRALFITSPGLSHILPTVPLAQALRALGHEVRYATGGDIRAVAEA------------------GLCAVDVSPGVNYAK 82 (400)
T ss_dssp CCCEEEEECCSSHHHHGGGHHHHHHHHHTTCEEEEEECSSTHHHHTT------------------TCEEEESSTTCCSHH
T ss_pred CCCeEEEECCCchhHHHHHHHHHHHHHHCCCEEEEEeCcchhhHHhc------------------CCeeEecCCchhHhh
Confidence 55899999999999999999999999999999999999988775555 45555554321100
Q ss_pred ---------CC----CCCcHHHHHHHHHHHhHHHHHHHHHHhHhcCCCccEEEecCCCcchHHHHHHhCCceEEEecchh
Q 011789 86 ---------FD----RSLNHEQFMSSLLHVFSAHAEEVIGQIVRSGENVHCLIADTYFVWPSKLAKKFGLYYISFWTESA 152 (477)
Q Consensus 86 ---------~~----~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~pD~iI~D~~~~~~~~~A~~~gIP~v~~~~~~~ 152 (477)
.. .......+...+.......+..+++.+++. +||+||+|.+++++..+|+.+|||++.+...+.
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~--~pD~Vv~d~~~~~~~~~A~~~gip~~~~~~~~~ 160 (400)
T 4amg_A 83 LFVPDDTDVTDPMHSEGLGEGFFAEMFARVSAVAVDGALRTARSW--RPDLVVHTPTQGAGPLTAAALQLPCVELPLGPA 160 (400)
T ss_dssp HHSCCC------------CHHHHHHHHHHHHHHHHHHHHHHHHHH--CCSEEEECTTCTHHHHHHHHTTCCEEECCSSTT
T ss_pred hccccccccccccchhhhhHHHHHHHHHHHHHHHHHHHHHHHHhc--CCCEEEECcchHHHHHHHHHcCCCceeeccccc
Confidence 00 001111112222222233334444444443 999999999999999999999999998755432
Q ss_pred HHHHHHhhhhhhhhcCCcCCCCCCCCcccccCCCCCCCCCCCccccccCCCchhHHHHHHHHh-hhccCCcEEEEcchhh
Q 011789 153 LVFTLYYHLDLLTINGHFQCYDCREDTIDYIPGVKAINPKDTTSYLQETDTTSACHQIIFNSF-QDTRNADYVLCNTVHE 231 (477)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~s~~~ 231 (477)
.......... .+.+.....+.. .........+....+.
T Consensus 161 ~~~~~~~~~~-----------------------------------------~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 199 (400)
T 4amg_A 161 DSEPGLGALI-----------------------------------------RRAMSKDYERHGVTGEPTGSVRLTTTPPS 199 (400)
T ss_dssp TCCHHHHHHH-----------------------------------------HHHTHHHHHHTTCCCCCSCEEEEECCCHH
T ss_pred ccccchhhHH-----------------------------------------HHHHHHHHHHhCCCcccccchhhcccCch
Confidence 2111000000 000001111100 0011122222222221
Q ss_pred ccHHHHHHHH-ccCC-EEEeCccCCCCCCccccccccCCccccchhhccCCCCcEEEEEecccccCC--HHHHHHHHHHH
Q 011789 232 LESEAVTALK-AKIP-FITMGPISLNKFSDRVVATSLWSESDCSQWLDKQPKGSVLYVSFGSYAHVS--KRDLIEIANGI 307 (477)
Q Consensus 232 l~~~~~~~~~-~~~p-~~~vGp~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~I~vs~Gs~~~~~--~~~~~~~~~al 307 (477)
+... .+. ...| ....++...... ..+.+|++..+++++|||||||+.... ...+..+++++
T Consensus 200 ~~~~---~~~~~~~~~~~~~~~~~~~~~------------~~~~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~~~~l 264 (400)
T 4amg_A 200 VEAL---LPEDRRSPGAWPMRYVPYNGG------------AVLPDWLPPAAGRRRIAVTLGSIDALSGGIAKLAPLFSEV 264 (400)
T ss_dssp HHHT---SCGGGCCTTCEECCCCCCCCC------------EECCTTCSCCTTCCEEEECCCSCC--CCSSSTTHHHHHHG
T ss_pred hhcc---CcccccCCcccCccccccccc------------ccCcccccccCCCcEEEEeCCcccccCccHHHHHHHHHHh
Confidence 1110 000 0112 333333332221 455568888888999999999986433 35678889999
Q ss_pred HhCCCeEEEEEcCCCCCCCCCCCCchhHHHhcCCCeEEEeeccHHHhhccCCCCccccccCCchhhHHHhcCcceecccc
Q 011789 308 AKSKVTFIWILRPDIVSSDDPNPLPEDFKKEVADRSMIITWCCQTSVLAHPAIGGFLTHCGWNSVLEGLWCGVPLLCFPL 387 (477)
Q Consensus 308 ~~~~~~~i~~~~~~~~~~~~~~~lp~~~~~~~~~nv~v~~~~p~~~lL~~~~~~~~ItHgG~gs~~eal~~GvP~v~~P~ 387 (477)
++.+.+++|..++... ..... .++|+++.+|+||.++|+|+++ ||||||+||++||+++|||+|++|+
T Consensus 265 ~~~~~~~v~~~~~~~~--~~~~~--------~~~~v~~~~~~p~~~lL~~~~~--~v~h~G~~s~~Eal~~GvP~v~~P~ 332 (400)
T 4amg_A 265 ADVDAEFVLTLGGGDL--ALLGE--------LPANVRVVEWIPLGALLETCDA--IIHHGGSGTLLTALAAGVPQCVIPH 332 (400)
T ss_dssp GGSSSEEEEECCTTCC--CCCCC--------CCTTEEEECCCCHHHHHTTCSE--EEECCCHHHHHHHHHHTCCEEECCC
T ss_pred hccCceEEEEecCccc--ccccc--------CCCCEEEEeecCHHHHhhhhhh--eeccCCccHHHHHHHhCCCEEEecC
Confidence 9999999999876532 11222 3469999999999999999998 9999999999999999999999999
Q ss_pred ccchhhHHHHHHhhhcceeeecCCC-CcCHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHH
Q 011789 388 YTDQFTNRKLAVDDWNVGLNLSNEK-VITKEEVSKNVHLLMGEKSGAKYRNAAKQVKKAMEYA 449 (477)
Q Consensus 388 ~~DQ~~na~~v~~~~G~G~~~~~~~-~~~~~~l~~~i~~~l~~~~~~~~~~~a~~l~~~~~~~ 449 (477)
+.||+.||+++++. |+|+.++ + +++.+ +|+++|+|+ +||+||+++++++++.
T Consensus 333 ~~dQ~~na~~v~~~-G~g~~l~--~~~~~~~----al~~lL~d~---~~r~~a~~l~~~~~~~ 385 (400)
T 4amg_A 333 GSYQDTNRDVLTGL-GIGFDAE--AGSLGAE----QCRRLLDDA---GLREAALRVRQEMSEM 385 (400)
T ss_dssp ---CHHHHHHHHHH-TSEEECC--TTTCSHH----HHHHHHHCH---HHHHHHHHHHHHHHTS
T ss_pred cccHHHHHHHHHHC-CCEEEcC--CCCchHH----HHHHHHcCH---HHHHHHHHHHHHHHcC
Confidence 99999999999999 9999994 3 66554 667889999 9999999999999973
No 8
>1iir_A Glycosyltransferase GTFB; rossmann fold; 1.80A {Amycolatopsis orientalis} SCOP: c.87.1.5
Probab=100.00 E-value=9.4e-43 Score=351.27 Aligned_cols=376 Identities=11% Similarity=0.080 Sum_probs=249.9
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCcchhhh-ccCCCCCCccccccccCCCCCeEEEecCCCCCCCCC
Q 011789 9 PHAIFISYPLQGHVNPSVQLALKLASQGFTITFVNTHFIHQQM-TKASPEMGSDIFAGVRKSGLDIRYMTLSDGLPLGFD 87 (477)
Q Consensus 9 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 87 (477)
|||+|++.++.||++|+++||++|++|||+|+|++++.+.+.+ .. ++++..++........
T Consensus 1 M~Il~~~~~~~GHv~P~l~la~~L~~~Gh~V~~~~~~~~~~~v~~~------------------g~~~~~i~~~~~~~~~ 62 (415)
T 1iir_A 1 MRVLLATCGSRGDTEPLVALAVRVRDLGADVRMCAPPDCAERLAEV------------------GVPHVPVGPSARAPIQ 62 (415)
T ss_dssp CEEEEECCSCHHHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHT------------------TCCEEECCC-------
T ss_pred CeEEEEcCCCchhHHHHHHHHHHHHHCCCeEEEEcCHHHHHHHHHc------------------CCeeeeCCCCHHHHhh
Confidence 7999999999999999999999999999999999999987776 55 6778888754321111
Q ss_pred C-CCcHHHHHHHHHHHhHHHHHHHHHHhHhcCCCccEEEecC-CCcc--hHHHHHHhCCceEEEecchhHHHHHHhhhhh
Q 011789 88 R-SLNHEQFMSSLLHVFSAHAEEVIGQIVRSGENVHCLIADT-YFVW--PSKLAKKFGLYYISFWTESALVFTLYYHLDL 163 (477)
Q Consensus 88 ~-~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~pD~iI~D~-~~~~--~~~~A~~~gIP~v~~~~~~~~~~~~~~~~~~ 163 (477)
. .......+..+ .......+++.+.....+||+||+|. +..+ +..+|+++|||++.+++.+....
T Consensus 63 ~~~~~~~~~~~~~---~~~~~~~~~~~l~~~~~~pD~vi~d~~~~~~~~~~~~A~~lgiP~v~~~~~~~~~~-------- 131 (415)
T 1iir_A 63 RAKPLTAEDVRRF---TTEAIATQFDEIPAAAEGCAAVVTTGLLAAAIGVRSVAEKLGIPYFYAFHCPSYVP-------- 131 (415)
T ss_dssp CCSCCCHHHHHHH---HHHHHHHHHHHHHHHTTTCSEEEEESCHHHHHHHHHHHHHHTCCEEEEESSGGGSC--------
T ss_pred cccccchHHHHHH---HHHHHHHHHHHHHHHhcCCCEEEECChhHhHhhHHHHHHHhCCCEEEEecCCCcCC--------
Confidence 0 11111112111 11122333333321113999999997 5568 89999999999999987654321
Q ss_pred hhhcCCcCCCCCCCCcccccCCCCCCCCCCCccccccCCCchhHH-------HHHHHHh---------hhccCCcEEEEc
Q 011789 164 LTINGHFQCYDCREDTIDYIPGVKAINPKDTTSYLQETDTTSACH-------QIIFNSF---------QDTRNADYVLCN 227 (477)
Q Consensus 164 ~~~~~~~p~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~---------~~~~~~~~~l~~ 227 (477)
..+.|..... . .+| . + ...+.+........+. +.+...+ +..... .++++
T Consensus 132 ---~~~~p~~~~~---~-~~~---~-~--~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-~~l~~ 197 (415)
T 1iir_A 132 ---SPYYPPPPLG---E-PST---Q-D--TIDIPAQWERNNQSAYQRYGGLLNSHRDAIGLPPVEDIFTFGYTD-HPWVA 197 (415)
T ss_dssp ---CSSSCCCC-------------------CHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCHHHHHHCS-SCEEC
T ss_pred ---CcccCCccCC---c-ccc---c-h--HHHHHHHHHHHHHHHHHHhHHHHHHHHHHcCCCCCCccccccCCC-CEEEe
Confidence 0111111000 0 000 0 0 0000000000000000 0011111 011122 57889
Q ss_pred chhhccH-HHHHHHHccCCEEEeCccCCCCCCccccccccCCccccchhhccCCCCcEEEEEecccccCCHHHHHHHHHH
Q 011789 228 TVHELES-EAVTALKAKIPFITMGPISLNKFSDRVVATSLWSESDCSQWLDKQPKGSVLYVSFGSYAHVSKRDLIEIANG 306 (477)
Q Consensus 228 s~~~l~~-~~~~~~~~~~p~~~vGp~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~I~vs~Gs~~~~~~~~~~~~~~a 306 (477)
+.+.|++ + ++.++++++||+..++....+ .++.+|++.. +++|||++||+. ...+....++++
T Consensus 198 ~~~~l~~~~-----~~~~~~~~vG~~~~~~~~~~~--------~~~~~~l~~~--~~~v~v~~Gs~~-~~~~~~~~~~~a 261 (415)
T 1iir_A 198 ADPVLAPLQ-----PTDLDAVQTGAWILPDERPLS--------PELAAFLDAG--PPPVYLGFGSLG-APADAVRVAIDA 261 (415)
T ss_dssp SCTTTSCCC-----CCSSCCEECCCCCCCCCCCCC--------HHHHHHHHTS--SCCEEEECC----CCHHHHHHHHHH
T ss_pred eChhhcCCC-----cccCCeEeeCCCccCcccCCC--------HHHHHHHhhC--CCeEEEeCCCCC-CcHHHHHHHHHH
Confidence 9998886 3 222238899999875321111 6788999864 369999999987 567788889999
Q ss_pred HHhCCCeEEEEEcCCCCCCCCCCCCchhHHHhcCCCeEEEeeccHHHhhccCCCCccccccCCchhhHHHhcCcceeccc
Q 011789 307 IAKSKVTFIWILRPDIVSSDDPNPLPEDFKKEVADRSMIITWCCQTSVLAHPAIGGFLTHCGWNSVLEGLWCGVPLLCFP 386 (477)
Q Consensus 307 l~~~~~~~i~~~~~~~~~~~~~~~lp~~~~~~~~~nv~v~~~~p~~~lL~~~~~~~~ItHgG~gs~~eal~~GvP~v~~P 386 (477)
++..+.+++|+++.... +... .++|+++.+|+||.++|+++++ ||||||+||++||+++|||+|++|
T Consensus 262 l~~~~~~~v~~~g~~~~---~~~~--------~~~~v~~~~~~~~~~~l~~~d~--~v~~~G~~t~~Ea~~~G~P~i~~p 328 (415)
T 1iir_A 262 IRAHGRRVILSRGWADL---VLPD--------DGADCFAIGEVNHQVLFGRVAA--VIHHGGAGTTHVAARAGAPQILLP 328 (415)
T ss_dssp HHHTTCCEEECTTCTTC---CCSS--------CGGGEEECSSCCHHHHGGGSSE--EEECCCHHHHHHHHHHTCCEEECC
T ss_pred HHHCCCeEEEEeCCCcc---cccC--------CCCCEEEeCcCChHHHHhhCCE--EEeCCChhHHHHHHHcCCCEEECC
Confidence 99999999998876522 1111 3458999999999999988887 999999999999999999999999
Q ss_pred cccchhhHHHHHHhhhcceeeecCCC-CcCHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHH
Q 011789 387 LYTDQFTNRKLAVDDWNVGLNLSNEK-VITKEEVSKNVHLLMGEKSGAKYRNAAKQVKKAMEYALQPNGSSDKNMDQFIK 465 (477)
Q Consensus 387 ~~~DQ~~na~~v~~~~G~G~~~~~~~-~~~~~~l~~~i~~~l~~~~~~~~~~~a~~l~~~~~~~~~~gg~~~~~~~~~~~ 465 (477)
...||+.||+++++. |+|+.+. . +++.++|.++|+++ +|+ +|++++++++++++. ......+.+.|+
T Consensus 329 ~~~dQ~~na~~l~~~-g~g~~~~--~~~~~~~~l~~~i~~l-~~~---~~~~~~~~~~~~~~~-----~~~~~~~~~~i~ 396 (415)
T 1iir_A 329 QMADQPYYAGRVAEL-GVGVAHD--GPIPTFDSLSAALATA-LTP---ETHARATAVAGTIRT-----DGAAVAARLLLD 396 (415)
T ss_dssp CSTTHHHHHHHHHHH-TSEEECS--SSSCCHHHHHHHHHHH-TSH---HHHHHHHHHHHHSCS-----CHHHHHHHHHHH
T ss_pred CCCccHHHHHHHHHC-CCcccCC--cCCCCHHHHHHHHHHH-cCH---HHHHHHHHHHHHHhh-----cChHHHHHHHHH
Confidence 999999999999999 9999994 2 78999999999999 988 999999999998763 223344444454
Q ss_pred HHH
Q 011789 466 DLK 468 (477)
Q Consensus 466 ~~~ 468 (477)
.+.
T Consensus 397 ~~~ 399 (415)
T 1iir_A 397 AVS 399 (415)
T ss_dssp HHH
T ss_pred HHH
Confidence 443
No 9
>3rsc_A CALG2; TDP, enediyne, structural genomics, PSI-2, protein structure initiative, center for eukaryotic structural genomics; HET: TYD C0T; 2.19A {Micromonospora echinospora} PDB: 3iaa_A*
Probab=100.00 E-value=9.3e-41 Score=336.66 Aligned_cols=379 Identities=12% Similarity=0.132 Sum_probs=260.2
Q ss_pred CCCCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCcchhhh-ccCCCCCCccccccccCCCCCeEEEecCCCC
Q 011789 4 NKTQKPHAIFISYPLQGHVNPSVQLALKLASQGFTITFVNTHFIHQQM-TKASPEMGSDIFAGVRKSGLDIRYMTLSDGL 82 (477)
Q Consensus 4 ~~~~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 82 (477)
....||||+|++.++.||++|+++||++|+++||+|+|++++.+.+.+ .. ++.+..++...
T Consensus 16 ~~~~m~rIl~~~~~~~GHv~p~l~La~~L~~~Gh~V~v~~~~~~~~~~~~~------------------G~~~~~~~~~~ 77 (415)
T 3rsc_A 16 EGRHMAHLLIVNVASHGLILPTLTVVTELVRRGHRVSYVTAGGFAEPVRAA------------------GATVVPYQSEI 77 (415)
T ss_dssp ---CCCEEEEECCSCHHHHGGGHHHHHHHHHTTCEEEEEECGGGHHHHHHT------------------TCEEEECCCST
T ss_pred CcccCCEEEEEeCCCccccccHHHHHHHHHHCCCEEEEEeCHHHHHHHHhc------------------CCEEEeccccc
Confidence 346799999999999999999999999999999999999999988887 55 78888887544
Q ss_pred CCCCC----CCCcHHHHHHH-HHHHhHHHHHHHHHHhHhcCCCccEEEec-CCCcchHHHHHHhCCceEEEecchhHHHH
Q 011789 83 PLGFD----RSLNHEQFMSS-LLHVFSAHAEEVIGQIVRSGENVHCLIAD-TYFVWPSKLAKKFGLYYISFWTESALVFT 156 (477)
Q Consensus 83 ~~~~~----~~~~~~~~~~~-~~~~~~~~~~~ll~~~~~~~~~pD~iI~D-~~~~~~~~~A~~~gIP~v~~~~~~~~~~~ 156 (477)
+.... ........+.. +.......+..+.+.+.+ .+||+||+| ...+++..+|+++|||++.+.+......
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~--~~PDlVi~d~~~~~~~~~aA~~~giP~v~~~~~~~~~~- 154 (415)
T 3rsc_A 78 IDADAAEVFGSDDLGVRPHLMYLRENVSVLRATAEALDG--DVPDLVLYDDFPFIAGQLLAARWRRPAVRLSAAFASNE- 154 (415)
T ss_dssp TTCCHHHHHHSSSSCHHHHHHHHHHHHHHHHHHHHHHSS--SCCSEEEEESTTHHHHHHHHHHTTCCEEEEESSCCCCS-
T ss_pred cccccchhhccccHHHHHHHHHHHHHHHHHHHHHHHHhc--cCCCEEEECchhhhHHHHHHHHhCCCEEEEEecccccC-
Confidence 32110 00011111222 223333344455555544 399999999 7777899999999999999864432100
Q ss_pred HHhhhhhhhhcCCcCCCCCCCCcccccCCCCCCCCCCCccccccCCCchhHHHHHHHH------hhhccCC-cEEEEcch
Q 011789 157 LYYHLDLLTINGHFQCYDCREDTIDYIPGVKAINPKDTTSYLQETDTTSACHQIIFNS------FQDTRNA-DYVLCNTV 229 (477)
Q Consensus 157 ~~~~~~~~~~~~~~p~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~-~~~l~~s~ 229 (477)
.+.+.. ....+.....+. ....+ ...+.+.+... ....... +..++...
T Consensus 155 -----------~~~~~~----~~~~~~~~~~p~----~~~~~-----~~~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~ 210 (415)
T 3rsc_A 155 -----------HYSFSQ----DMVTLAGTIDPL----DLPVF-----RDTLRDLLAEHGLSRSVVDCWNHVEQLNLVFVP 210 (415)
T ss_dssp -----------SCCHHH----HHHHHHTCCCGG----GCHHH-----HHHHHHHHHHTTCCCCHHHHHTCCCSEEEESSC
T ss_pred -----------cccccc----ccccccccCChh----hHHHH-----HHHHHHHHHHcCCCCChhhhhcCCCCeEEEEcC
Confidence 000000 000000000000 00000 00011111100 0111222 67777777
Q ss_pred hhccHHHHHHHHccCC--EEEeCccCCCCCCccccccccCCccccchhhccCCCCcEEEEEecccccCCHHHHHHHHHHH
Q 011789 230 HELESEAVTALKAKIP--FITMGPISLNKFSDRVVATSLWSESDCSQWLDKQPKGSVLYVSFGSYAHVSKRDLIEIANGI 307 (477)
Q Consensus 230 ~~l~~~~~~~~~~~~p--~~~vGp~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~I~vs~Gs~~~~~~~~~~~~~~al 307 (477)
+.++++ ...++ +.++||+..... +..+|....+++++|||++||......+.+..+++++
T Consensus 211 ~~~~~~-----~~~~~~~~~~vGp~~~~~~-------------~~~~~~~~~~~~~~v~v~~Gs~~~~~~~~~~~~~~al 272 (415)
T 3rsc_A 211 KAFQIA-----GDTFDDRFVFVGPCFDDRR-------------FLGEWTRPADDLPVVLVSLGTTFNDRPGFFRDCARAF 272 (415)
T ss_dssp TTTSTT-----GGGCCTTEEECCCCCCCCG-------------GGCCCCCCSSCCCEEEEECTTTSCCCHHHHHHHHHHH
T ss_pred cccCCC-----cccCCCceEEeCCCCCCcc-------------cCcCccccCCCCCEEEEECCCCCCChHHHHHHHHHHH
Confidence 777654 44555 999999875432 2223554455678999999999776777889999999
Q ss_pred HhCCCeEEEEEcCCCCCCCCCCCCchhHHHhcCCCeEEEeeccHHHhhccCCCCccccccCCchhhHHHhcCcceecccc
Q 011789 308 AKSKVTFIWILRPDIVSSDDPNPLPEDFKKEVADRSMIITWCCQTSVLAHPAIGGFLTHCGWNSVLEGLWCGVPLLCFPL 387 (477)
Q Consensus 308 ~~~~~~~i~~~~~~~~~~~~~~~lp~~~~~~~~~nv~v~~~~p~~~lL~~~~~~~~ItHgG~gs~~eal~~GvP~v~~P~ 387 (477)
+..+.+++|.++.+.. .+. .+..++|+++.+|+|+.++|+++++ ||||||+||+.||+++|+|+|++|.
T Consensus 273 ~~~~~~~v~~~g~~~~--------~~~-l~~~~~~v~~~~~~~~~~ll~~ad~--~v~~~G~~t~~Ea~~~G~P~v~~p~ 341 (415)
T 3rsc_A 273 DGQPWHVVMTLGGQVD--------PAA-LGDLPPNVEAHRWVPHVKVLEQATV--CVTHGGMGTLMEALYWGRPLVVVPQ 341 (415)
T ss_dssp TTSSCEEEEECTTTSC--------GGG-GCCCCTTEEEESCCCHHHHHHHEEE--EEESCCHHHHHHHHHTTCCEEECCC
T ss_pred hcCCcEEEEEeCCCCC--------hHH-hcCCCCcEEEEecCCHHHHHhhCCE--EEECCcHHHHHHHHHhCCCEEEeCC
Confidence 9999999998875411 011 1124579999999999999999998 9999999999999999999999999
Q ss_pred ccchhhHHHHHHhhhcceeeecCCC-CcCHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHH
Q 011789 388 YTDQFTNRKLAVDDWNVGLNLSNEK-VITKEEVSKNVHLLMGEKSGAKYRNAAKQVKKAMEYALQPNGSSDKNMDQFIKD 466 (477)
Q Consensus 388 ~~DQ~~na~~v~~~~G~G~~~~~~~-~~~~~~l~~~i~~~l~~~~~~~~~~~a~~l~~~~~~~~~~gg~~~~~~~~~~~~ 466 (477)
..||+.||.++++. |+|+.+. . +++.++|.++|.++|+|+ +++++++++++++.+ +++....++.+.+.
T Consensus 342 ~~~q~~~a~~l~~~-g~g~~~~--~~~~~~~~l~~~i~~ll~~~---~~~~~~~~~~~~~~~----~~~~~~~~~~i~~~ 411 (415)
T 3rsc_A 342 SFDVQPMARRVDQL-GLGAVLP--GEKADGDTLLAAVGAVAADP---ALLARVEAMRGHVRR----AGGAARAADAVEAY 411 (415)
T ss_dssp SGGGHHHHHHHHHH-TCEEECC--GGGCCHHHHHHHHHHHHTCH---HHHHHHHHHHHHHHH----SCHHHHHHHHHHHH
T ss_pred cchHHHHHHHHHHc-CCEEEcc--cCCCCHHHHHHHHHHHHcCH---HHHHHHHHHHHHHHh----cCHHHHHHHHHHHH
Confidence 99999999999999 9999993 2 789999999999999999 999999999999987 44444444444433
No 10
>1rrv_A Glycosyltransferase GTFD; GT-B, glycosyltransferase, rossmann fold, glycopeptide, VACO antibiotic, transferase-antibiotic complex; HET: OMZ GHP OMY 3FG TYD BGC; 2.00A {Amycolatopsis orientalis} SCOP: c.87.1.5
Probab=100.00 E-value=8.7e-42 Score=344.35 Aligned_cols=364 Identities=13% Similarity=0.049 Sum_probs=247.8
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCcchhhh-ccCCCCCCccccccccCCCCCeEEEecCCCCCCCCC
Q 011789 9 PHAIFISYPLQGHVNPSVQLALKLASQGFTITFVNTHFIHQQM-TKASPEMGSDIFAGVRKSGLDIRYMTLSDGLPLGFD 87 (477)
Q Consensus 9 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 87 (477)
|||+|++.++.||++|+++||++|+++||+|+|++++.+.+.+ .. ++++..++........
T Consensus 1 MrIl~~~~~~~GH~~p~l~la~~L~~~Gh~V~~~~~~~~~~~v~~~------------------g~~~~~~~~~~~~~~~ 62 (416)
T 1rrv_A 1 MRVLLSVCGTRGDVEIGVALADRLKALGVQTRMCAPPAAEERLAEV------------------GVPHVPVGLPQHMMLQ 62 (416)
T ss_dssp CEEEEEEESCHHHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHH------------------TCCEEECSCCGGGCCC
T ss_pred CeEEEEecCCCccHHHHHHHHHHHHHCCCeEEEEeCHHHHHHHHHc------------------CCeeeecCCCHHHHHh
Confidence 7999999999999999999999999999999999999887777 55 6777877754211110
Q ss_pred --CCCcHHHHHHHHHHHhHHHHHHHHHHhHhcCCCccEEEecCC-Ccc--hHHHHHHhCCceEEEecchhHHHHHHhhhh
Q 011789 88 --RSLNHEQFMSSLLHVFSAHAEEVIGQIVRSGENVHCLIADTY-FVW--PSKLAKKFGLYYISFWTESALVFTLYYHLD 162 (477)
Q Consensus 88 --~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~pD~iI~D~~-~~~--~~~~A~~~gIP~v~~~~~~~~~~~~~~~~~ 162 (477)
........+..+.. .....+++.+.....+||+||+|.+ .++ +..+|+.+|||++.+++.+....
T Consensus 63 ~~~~~~~~~~~~~~~~---~~~~~~~~~l~~~~~~pD~vi~d~~~~~~~~~~~~A~~~giP~v~~~~~~~~~~------- 132 (416)
T 1rrv_A 63 EGMPPPPPEEEQRLAA---MTVEMQFDAVPGAAEGCAAVVAVGDLAAATGVRSVAEKLGLPFFYSVPSPVYLA------- 132 (416)
T ss_dssp TTSCCCCHHHHHHHHH---HHHHHHHHHHHHHTTTCSEEEEEECHHHHHHHHHHHHHHTCCEEEEESSGGGSC-------
T ss_pred hccccchhHHHHHHHH---HHHHHHHHHHHHHhcCCCEEEEcCchHHHHHHHHHHHHcCCCEEEEeCCCCCCC-------
Confidence 01111111222211 1223333333311138999999973 446 88999999999999877653211
Q ss_pred hhhhcCCcCCCCCCCCcccccCCCCCCCCCCCcc-ccccCCCchhH---HHHHHHHh---------hhccCCcEEEEcch
Q 011789 163 LLTINGHFQCYDCREDTIDYIPGVKAINPKDTTS-YLQETDTTSAC---HQIIFNSF---------QDTRNADYVLCNTV 229 (477)
Q Consensus 163 ~~~~~~~~p~~~~~~~~~~~~p~~~~~~~~~~~~-~~~~~~~~~~~---~~~~~~~~---------~~~~~~~~~l~~s~ 229 (477)
..++| +... .+..++ +..+... .+........+ .+.+...+ +..... .+++++.
T Consensus 133 ----~~~~p-~~~~---~~~~~~----r~~n~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-~~l~~~~ 199 (416)
T 1rrv_A 133 ----SPHLP-PAYD---EPTTPG----VTDIRVLWEERAARFADRYGPTLNRRRAEIGLPPVEDVFGYGHGE-RPLLAAD 199 (416)
T ss_dssp ----CSSSC-CCBC---SCCCTT----CCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCSCHHHHTTCS-SCEECSC
T ss_pred ----CcccC-CCCC---CCCCch----HHHHHHHHHHHHHHHHHHhHHHHHHHHHHcCCCCCCchhhhccCC-CeEEccC
Confidence 01111 0000 000000 0111000 00000000000 00111111 111233 6888999
Q ss_pred hhccHHHHHHHHccCCEEEeCccCCCCCCccccccccCCccccchhhccCCCCcEEEEEeccccc-CCHHHHHHHHHHHH
Q 011789 230 HELESEAVTALKAKIPFITMGPISLNKFSDRVVATSLWSESDCSQWLDKQPKGSVLYVSFGSYAH-VSKRDLIEIANGIA 308 (477)
Q Consensus 230 ~~l~~~~~~~~~~~~p~~~vGp~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~I~vs~Gs~~~-~~~~~~~~~~~al~ 308 (477)
++|+++ ++.++++++||+..+.....+ .++.+|++.. +++|||++||... ...+.+..++++++
T Consensus 200 ~~l~~~-----~~~~~~~~vG~~~~~~~~~~~--------~~~~~~l~~~--~~~v~v~~Gs~~~~~~~~~~~~~~~al~ 264 (416)
T 1rrv_A 200 PVLAPL-----QPDVDAVQTGAWLLSDERPLP--------PELEAFLAAG--SPPVHIGFGSSSGRGIADAAKVAVEAIR 264 (416)
T ss_dssp TTTSCC-----CSSCCCEECCCCCCCCCCCCC--------HHHHHHHHSS--SCCEEECCTTCCSHHHHHHHHHHHHHHH
T ss_pred ccccCC-----CCCCCeeeECCCccCccCCCC--------HHHHHHHhcC--CCeEEEecCCCCccChHHHHHHHHHHHH
Confidence 988864 222238899999875321111 6788899864 3689999999863 34566888999999
Q ss_pred hCCCeEEEEEcCCCCCCCCCCCCchhHHHhcCCCeEEEeeccHHHhhccCCCCccccccCCchhhHHHhcCcceeccccc
Q 011789 309 KSKVTFIWILRPDIVSSDDPNPLPEDFKKEVADRSMIITWCCQTSVLAHPAIGGFLTHCGWNSVLEGLWCGVPLLCFPLY 388 (477)
Q Consensus 309 ~~~~~~i~~~~~~~~~~~~~~~lp~~~~~~~~~nv~v~~~~p~~~lL~~~~~~~~ItHgG~gs~~eal~~GvP~v~~P~~ 388 (477)
..+.+++|+++.... +. +..++|+++.+|+||.++|+++++ ||||||+||++||+++|||+|++|+.
T Consensus 265 ~~~~~~v~~~g~~~~---~~--------~~~~~~v~~~~~~~~~~ll~~~d~--~v~~~G~~t~~Ea~~~G~P~i~~p~~ 331 (416)
T 1rrv_A 265 AQGRRVILSRGWTEL---VL--------PDDRDDCFAIDEVNFQALFRRVAA--VIHHGSAGTEHVATRAGVPQLVIPRN 331 (416)
T ss_dssp HTTCCEEEECTTTTC---CC--------SCCCTTEEEESSCCHHHHGGGSSE--EEECCCHHHHHHHHHHTCCEEECCCS
T ss_pred HCCCeEEEEeCCccc---cc--------cCCCCCEEEeccCChHHHhccCCE--EEecCChhHHHHHHHcCCCEEEccCC
Confidence 999999999886522 11 123569999999999999998888 99999999999999999999999999
Q ss_pred cchhhHHHHHHhhhcceeeecCCC-CcCHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHH
Q 011789 389 TDQFTNRKLAVDDWNVGLNLSNEK-VITKEEVSKNVHLLMGEKSGAKYRNAAKQVKKAMEY 448 (477)
Q Consensus 389 ~DQ~~na~~v~~~~G~G~~~~~~~-~~~~~~l~~~i~~~l~~~~~~~~~~~a~~l~~~~~~ 448 (477)
.||+.||+++++. |+|+.+. . +++.++|.++|+++ +|+ +|+++++++++++++
T Consensus 332 ~dQ~~na~~l~~~-g~g~~~~--~~~~~~~~l~~~i~~l-~~~---~~~~~~~~~~~~~~~ 385 (416)
T 1rrv_A 332 TDQPYFAGRVAAL-GIGVAHD--GPTPTFESLSAALTTV-LAP---ETRARAEAVAGMVLT 385 (416)
T ss_dssp BTHHHHHHHHHHH-TSEEECS--SSCCCHHHHHHHHHHH-TSH---HHHHHHHHHTTTCCC
T ss_pred CCcHHHHHHHHHC-CCccCCC--CCCCCHHHHHHHHHHh-hCH---HHHHHHHHHHHHHhh
Confidence 9999999999999 9999993 2 78999999999999 998 999999999988874
No 11
>3ia7_A CALG4; glycosysltransferase, calicheamicin, enediyne, transf; 1.91A {Micromonospora echinospora}
Probab=100.00 E-value=1.1e-39 Score=327.00 Aligned_cols=374 Identities=17% Similarity=0.203 Sum_probs=260.0
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCcchhhh-ccCCCCCCccccccccCCCCCeEEEecCCCCCCC
Q 011789 7 QKPHAIFISYPLQGHVNPSVQLALKLASQGFTITFVNTHFIHQQM-TKASPEMGSDIFAGVRKSGLDIRYMTLSDGLPLG 85 (477)
Q Consensus 7 ~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 85 (477)
+||||+|++.++.||++|++.|+++|+++||+|+|++++.+.+.+ .. ++++..++...+..
T Consensus 3 ~M~~il~~~~~~~Ghv~~~~~La~~L~~~GheV~v~~~~~~~~~~~~~------------------G~~~~~~~~~~~~~ 64 (402)
T 3ia7_A 3 RQRHILFANVQGHGHVYPSLGLVSELARRGHRITYVTTPLFADEVKAA------------------GAEVVLYKSEFDTF 64 (402)
T ss_dssp CCCEEEEECCSSHHHHHHHHHHHHHHHHTTCEEEEEECHHHHHHHHHT------------------TCEEEECCCGGGTS
T ss_pred CCCEEEEEeCCCCcccccHHHHHHHHHhCCCEEEEEcCHHHHHHHHHc------------------CCEEEecccccccc
Confidence 578999999999999999999999999999999999998888877 55 67888887433211
Q ss_pred C----CCCCcHHHHHHH-HHHHhHHHHHHHHHHhHhcCCCccEEEec-CCCcchHHHHHHhCCceEEEecchhHHHHHHh
Q 011789 86 F----DRSLNHEQFMSS-LLHVFSAHAEEVIGQIVRSGENVHCLIAD-TYFVWPSKLAKKFGLYYISFWTESALVFTLYY 159 (477)
Q Consensus 86 ~----~~~~~~~~~~~~-~~~~~~~~~~~ll~~~~~~~~~pD~iI~D-~~~~~~~~~A~~~gIP~v~~~~~~~~~~~~~~ 159 (477)
. ....+....+.. +.......+..+.+.+.+. +||+||+| ...+++..+|+++|||++.+++....... +.
T Consensus 65 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~--~pD~Vi~d~~~~~~~~~aA~~~giP~v~~~~~~~~~~~-~~ 141 (402)
T 3ia7_A 65 HVPEVVKQEDAETQLHLVYVRENVAILRAAEEALGDN--PPDLVVYDVFPFIAGRLLAARWDRPAVRLTGGFAANEH-YS 141 (402)
T ss_dssp SSSSSSCCTTHHHHHHHHHHHHHHHHHHHHHHHHTTC--CCSEEEEESTTHHHHHHHHHHHTCCEEEEESSCCCBTT-BC
T ss_pred cccccccccchHHHHHHHHHHHHHHHHHHHHHHHhcc--CCCEEEECchHHHHHHHHHHhhCCCEEEEecccccCcc-cc
Confidence 1 122233333333 3344444455555555553 99999999 77778999999999999998644321100 00
Q ss_pred hhhhhhhcCCcCCCCCCCCcccccCCCCCCCCCCCccccccCCCchhHHHHHHHHh----------hhccCC-cEEEEcc
Q 011789 160 HLDLLTINGHFQCYDCREDTIDYIPGVKAINPKDTTSYLQETDTTSACHQIIFNSF----------QDTRNA-DYVLCNT 228 (477)
Q Consensus 160 ~~~~~~~~~~~p~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~-~~~l~~s 228 (477)
..+... .......+. . ...+...+.... ...... +..++..
T Consensus 142 ~~~~~~---------------~~~~~~~~~----~---------~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~ 193 (402)
T 3ia7_A 142 LFKELW---------------KSNGQRHPA----D---------VEAVHSVLVDLLGKYGVDTPVKEYWDEIEGLTIVFL 193 (402)
T ss_dssp HHHHHH---------------HHHTCCCGG----G---------SHHHHHHHHHHHHTTTCCSCHHHHHTCCCSCEEESS
T ss_pred cccccc---------------ccccccChh----h---------HHHHHHHHHHHHHHcCCCCChhhhhcCCCCeEEEEc
Confidence 000000 000000000 0 000011111000 111122 5666666
Q ss_pred hhhccHHHHHHHHccCC--EEEeCccCCCCCCccccccccCCccccchhhccCCCCcEEEEEecccccCCHHHHHHHHHH
Q 011789 229 VHELESEAVTALKAKIP--FITMGPISLNKFSDRVVATSLWSESDCSQWLDKQPKGSVLYVSFGSYAHVSKRDLIEIANG 306 (477)
Q Consensus 229 ~~~l~~~~~~~~~~~~p--~~~vGp~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~I~vs~Gs~~~~~~~~~~~~~~a 306 (477)
.++++++ ...++ +.++||+..... +..+|+...+++++|||++||......+.+..++++
T Consensus 194 ~~~~~~~-----~~~~~~~~~~vGp~~~~~~-------------~~~~~~~~~~~~~~v~v~~G~~~~~~~~~~~~~~~~ 255 (402)
T 3ia7_A 194 PKSFQPF-----AETFDERFAFVGPTLTGRD-------------GQPGWQPPRPDAPVLLVSLGNQFNEHPEFFRACAQA 255 (402)
T ss_dssp CGGGSTT-----GGGCCTTEEECCCCCCC-----------------CCCCCSSTTCCEEEEECCSCSSCCHHHHHHHHHH
T ss_pred ChHhCCc-----cccCCCCeEEeCCCCCCcc-------------cCCCCcccCCCCCEEEEECCCCCcchHHHHHHHHHH
Confidence 6666654 44444 999999875432 122355445567899999999987677788999999
Q ss_pred HHhCCCeEEEEEcCCCCCCCCCCCCchhHHHhcCCCeEEEeeccHHHhhccCCCCccccccCCchhhHHHhcCcceeccc
Q 011789 307 IAKSKVTFIWILRPDIVSSDDPNPLPEDFKKEVADRSMIITWCCQTSVLAHPAIGGFLTHCGWNSVLEGLWCGVPLLCFP 386 (477)
Q Consensus 307 l~~~~~~~i~~~~~~~~~~~~~~~lp~~~~~~~~~nv~v~~~~p~~~lL~~~~~~~~ItHgG~gs~~eal~~GvP~v~~P 386 (477)
++..+.+++|.++.+.. .+. .++.++|+++.+|+|+.++|+++++ ||||||+||+.||+++|+|+|++|
T Consensus 256 ~~~~~~~~~~~~g~~~~--------~~~-~~~~~~~v~~~~~~~~~~ll~~ad~--~v~~~G~~t~~Ea~~~G~P~v~~p 324 (402)
T 3ia7_A 256 FADTPWHVVMAIGGFLD--------PAV-LGPLPPNVEAHQWIPFHSVLAHARA--CLTHGTTGAVLEAFAAGVPLVLVP 324 (402)
T ss_dssp HTTSSCEEEEECCTTSC--------GGG-GCSCCTTEEEESCCCHHHHHTTEEE--EEECCCHHHHHHHHHTTCCEEECG
T ss_pred HhcCCcEEEEEeCCcCC--------hhh-hCCCCCcEEEecCCCHHHHHhhCCE--EEECCCHHHHHHHHHhCCCEEEeC
Confidence 99989899888875411 111 1124579999999999999999998 999999999999999999999999
Q ss_pred c-ccchhhHHHHHHhhhcceeeecCCC-CcCHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHH
Q 011789 387 L-YTDQFTNRKLAVDDWNVGLNLSNEK-VITKEEVSKNVHLLMGEKSGAKYRNAAKQVKKAMEYALQPNGSSDKNMDQFI 464 (477)
Q Consensus 387 ~-~~DQ~~na~~v~~~~G~G~~~~~~~-~~~~~~l~~~i~~~l~~~~~~~~~~~a~~l~~~~~~~~~~gg~~~~~~~~~~ 464 (477)
. ..||+.||.++++. |+|+.+. . +++.+.|.+++.++|+|+ +++++++++++++.+ +++....++.+.
T Consensus 325 ~~~~~q~~~a~~~~~~-g~g~~~~--~~~~~~~~l~~~~~~ll~~~---~~~~~~~~~~~~~~~----~~~~~~~~~~i~ 394 (402)
T 3ia7_A 325 HFATEAAPSAERVIEL-GLGSVLR--PDQLEPASIREAVERLAADS---AVRERVRRMQRDILS----SGGPARAADEVE 394 (402)
T ss_dssp GGCGGGHHHHHHHHHT-TSEEECC--GGGCSHHHHHHHHHHHHHCH---HHHHHHHHHHHHHHT----SCHHHHHHHHHH
T ss_pred CCcccHHHHHHHHHHc-CCEEEcc--CCCCCHHHHHHHHHHHHcCH---HHHHHHHHHHHHHhh----CChHHHHHHHHH
Confidence 9 99999999999999 9999993 2 789999999999999999 999999999999875 445455554444
Q ss_pred HHHH
Q 011789 465 KDLK 468 (477)
Q Consensus 465 ~~~~ 468 (477)
+.+.
T Consensus 395 ~~~~ 398 (402)
T 3ia7_A 395 AYLG 398 (402)
T ss_dssp HHHH
T ss_pred HHHh
Confidence 4443
No 12
>3h4t_A Glycosyltransferase GTFA, glycosyltransferase; vancomycin, teicoplanin, ORF1, natural products, antibiotic; HET: UDP; 1.15A {Amycolatopsis orientalis} SCOP: c.87.1.5 PDB: 3h4i_A* 1pn3_A* 1pnv_A*
Probab=100.00 E-value=6.2e-41 Score=336.58 Aligned_cols=348 Identities=13% Similarity=0.094 Sum_probs=239.7
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCcchhhh-ccCCCCCCccccccccCCCCCeEEEecCCCCCCC-C
Q 011789 9 PHAIFISYPLQGHVNPSVQLALKLASQGFTITFVNTHFIHQQM-TKASPEMGSDIFAGVRKSGLDIRYMTLSDGLPLG-F 86 (477)
Q Consensus 9 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-~ 86 (477)
|||+|++.++.||++|+++||++|++|||+|++++++.+.+.+ .. ++++..++...... .
T Consensus 1 MrIli~~~gt~Ghv~p~~~La~~L~~~Gh~V~v~~~~~~~~~v~~~------------------g~~~~~l~~~~~~~~~ 62 (404)
T 3h4t_A 1 MGVLITGCGSRGDTEPLVALAARLRELGADARMCLPPDYVERCAEV------------------GVPMVPVGRAVRAGAR 62 (404)
T ss_dssp -CEEEEEESSHHHHHHHHHHHHHHHHTTCCEEEEECGGGHHHHHHT------------------TCCEEECSSCSSGGGS
T ss_pred CeEEEEeCCCCccHHHHHHHHHHHHHCCCeEEEEeCHHHHHHHHHc------------------CCceeecCCCHHHHhc
Confidence 7999999999999999999999999999999999999988888 56 67777777432210 0
Q ss_pred CCCCcHHHHHHHHHHHhHHHHHHHHHHhHhcCCCccEEEecCCCcch---HHHHHHhCCceEEEecchhHHHHHHhhhhh
Q 011789 87 DRSLNHEQFMSSLLHVFSAHAEEVIGQIVRSGENVHCLIADTYFVWP---SKLAKKFGLYYISFWTESALVFTLYYHLDL 163 (477)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~pD~iI~D~~~~~~---~~~A~~~gIP~v~~~~~~~~~~~~~~~~~~ 163 (477)
........+...+.......++.+.+.. + +||+||+|.....+ ..+|+++|||++.+..++......+
T Consensus 63 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~---~pD~Vi~~~~~~~~~~a~~~A~~lgiP~v~~~~~p~~~~~~~----- 133 (404)
T 3h4t_A 63 EPGELPPGAAEVVTEVVAEWFDKVPAAI-E---GCDAVVTTGLLPAAVAVRSMAEKLGIPYRYTVLSPDHLPSEQ----- 133 (404)
T ss_dssp CTTCCCTTCGGGHHHHHHHHHHHHHHHH-T---TCSEEEEEECHHHHHHHHHHHHHHTCCEEEEESSGGGSGGGS-----
T ss_pred cccCCHHHHHHHHHHHHHHHHHHHHHHh-c---CCCEEEECCchhhhhhhhhHHhhcCCCEEEEEcCCccCCChh-----
Confidence 0000000011111112222233332222 2 89999998665544 7899999999999876654211000
Q ss_pred hhhcCCcCCCCCCCCcccccCCCCCCCCCCCccccccCCCchhHHHHHH---HHhhhc--------cCCcEEEEcchhhc
Q 011789 164 LTINGHFQCYDCREDTIDYIPGVKAINPKDTTSYLQETDTTSACHQIIF---NSFQDT--------RNADYVLCNTVHEL 232 (477)
Q Consensus 164 ~~~~~~~p~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~--------~~~~~~l~~s~~~l 232 (477)
.. .............+.+.+. .....- ...+..+.+..+.+
T Consensus 134 -------------------~~---------~~~~~~~~~~~~~~~~~~~~~~~~lgl~~~~~~~~~~~~~~~l~~~~~~l 185 (404)
T 3h4t_A 134 -------------------SQ---------AERDMYNQGADRLFGDAVNSHRASIGLPPVEHLYDYGYTDQPWLAADPVL 185 (404)
T ss_dssp -------------------CH---------HHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCHHHHHHCSSCEECSCTTT
T ss_pred -------------------HH---------HHHHHHHHHHHHHhHHHHHHHHHHcCCCCCcchhhccccCCeEEeeCcce
Confidence 00 0000000000000000000 000000 00122345666666
Q ss_pred cHHHHHHHHccCC-EEEeCccCCCCCCccccccccCCccccchhhccCCCCcEEEEEecccccCCHHHHHHHHHHHHhCC
Q 011789 233 ESEAVTALKAKIP-FITMGPISLNKFSDRVVATSLWSESDCSQWLDKQPKGSVLYVSFGSYAHVSKRDLIEIANGIAKSK 311 (477)
Q Consensus 233 ~~~~~~~~~~~~p-~~~vGp~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~I~vs~Gs~~~~~~~~~~~~~~al~~~~ 311 (477)
.+. +++.+ +.++|++..+.....+ +++.+|++. .+++|||++||+.. ..+.+..+++++++.+
T Consensus 186 ~p~-----~~~~~~~~~~G~~~~~~~~~~~--------~~l~~~l~~--~~~~Vlv~~Gs~~~-~~~~~~~~~~al~~~~ 249 (404)
T 3h4t_A 186 SPL-----RPTDLGTVQTGAWILPDQRPLS--------AELEGFLRA--GSPPVYVGFGSGPA-PAEAARVAIEAVRAQG 249 (404)
T ss_dssp SCC-----CTTCCSCCBCCCCCCCCCCCCC--------HHHHHHHHT--SSCCEEECCTTSCC-CTTHHHHHHHHHHHTT
T ss_pred eCC-----CCCCCCeEEeCccccCCCCCCC--------HHHHHHHhc--CCCeEEEECCCCCC-cHHHHHHHHHHHHhCC
Confidence 543 33345 8889988765432222 677888875 45799999999976 6677889999999999
Q ss_pred CeEEEEEcCCCCCCCCCCCCchhHHHhcCCCeEEEeeccHHHhhccCCCCccccccCCchhhHHHhcCcceeccccccch
Q 011789 312 VTFIWILRPDIVSSDDPNPLPEDFKKEVADRSMIITWCCQTSVLAHPAIGGFLTHCGWNSVLEGLWCGVPLLCFPLYTDQ 391 (477)
Q Consensus 312 ~~~i~~~~~~~~~~~~~~~lp~~~~~~~~~nv~v~~~~p~~~lL~~~~~~~~ItHgG~gs~~eal~~GvP~v~~P~~~DQ 391 (477)
.++||.+++... ..+ ..++|+++.+|+||.++|+++++ ||||||+||+.|++++|||+|++|+..||
T Consensus 250 ~~vv~~~g~~~~-----~~~------~~~~~v~~~~~~~~~~ll~~~d~--~v~~gG~~t~~Eal~~GvP~v~~p~~~dQ 316 (404)
T 3h4t_A 250 RRVVLSSGWAGL-----GRI------DEGDDCLVVGEVNHQVLFGRVAA--VVHHGGAGTTTAVTRAGAPQVVVPQKADQ 316 (404)
T ss_dssp CCEEEECTTTTC-----CCS------SCCTTEEEESSCCHHHHGGGSSE--EEECCCHHHHHHHHHHTCCEEECCCSTTH
T ss_pred CEEEEEeCCccc-----ccc------cCCCCEEEecCCCHHHHHhhCcE--EEECCcHHHHHHHHHcCCCEEEcCCcccH
Confidence 999999886522 111 12469999999999999999998 99999999999999999999999999999
Q ss_pred hhHHHHHHhhhcceeeecCCC-CcCHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHH
Q 011789 392 FTNRKLAVDDWNVGLNLSNEK-VITKEEVSKNVHLLMGEKSGAKYRNAAKQVKKAME 447 (477)
Q Consensus 392 ~~na~~v~~~~G~G~~~~~~~-~~~~~~l~~~i~~~l~~~~~~~~~~~a~~l~~~~~ 447 (477)
+.||+++++. |+|+.+. . +++.++|.++|+++|+ + +|+++++++++.+.
T Consensus 317 ~~na~~~~~~-G~g~~l~--~~~~~~~~l~~ai~~ll~-~---~~~~~~~~~~~~~~ 366 (404)
T 3h4t_A 317 PYYAGRVADL-GVGVAHD--GPTPTVESLSAALATALT-P---GIRARAAAVAGTIR 366 (404)
T ss_dssp HHHHHHHHHH-TSEEECS--SSSCCHHHHHHHHHHHTS-H---HHHHHHHHHHTTCC
T ss_pred HHHHHHHHHC-CCEeccC--cCCCCHHHHHHHHHHHhC-H---HHHHHHHHHHHHHh
Confidence 9999999999 9999994 2 7899999999999998 8 99999999998876
No 13
>2yjn_A ERYCIII, glycosyltransferase; transferase, cytochrome P450; 3.09A {Saccharopolyspora erythraea}
Probab=100.00 E-value=1.8e-39 Score=329.93 Aligned_cols=357 Identities=13% Similarity=0.163 Sum_probs=236.7
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCcchhhh-ccCCCCCCccccccccCCCCCeEEEecCCCCCC
Q 011789 6 TQKPHAIFISYPLQGHVNPSVQLALKLASQGFTITFVNTHFIHQQM-TKASPEMGSDIFAGVRKSGLDIRYMTLSDGLPL 84 (477)
Q Consensus 6 ~~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 84 (477)
..||||+|++.++.||++|+++||++|+++||+|+|++++.+.+.+ .. ++++..++.....
T Consensus 18 ~~~mrIl~~~~~~~GHv~p~l~la~~L~~~GheV~~~~~~~~~~~v~~~------------------G~~~~~i~~~~~~ 79 (441)
T 2yjn_A 18 GSHMRVVFSSMASKSHLFGLVPLAWAFRAAGHEVRVVASPALTEDITAA------------------GLTAVPVGTDVDL 79 (441)
T ss_dssp -CCCEEEEECCSCHHHHTTTHHHHHHHHHTTCEEEEEECGGGHHHHHTT------------------TCCEEECSCCCCH
T ss_pred CCccEEEEEcCCCcchHhHHHHHHHHHHHCCCeEEEEeCchhHHHHHhC------------------CCceeecCCccch
Confidence 4689999999999999999999999999999999999999987777 55 6778888754210
Q ss_pred -C---------------CC-----CC-CcHHHH---HHHHHHHhH-----H-HHHHHHHHhHhcCCCccEEEecCCCcch
Q 011789 85 -G---------------FD-----RS-LNHEQF---MSSLLHVFS-----A-HAEEVIGQIVRSGENVHCLIADTYFVWP 133 (477)
Q Consensus 85 -~---------------~~-----~~-~~~~~~---~~~~~~~~~-----~-~~~~ll~~~~~~~~~pD~iI~D~~~~~~ 133 (477)
+ .+ .. ..+..+ +..+..... . .+.++++.+.+. +||+||+|..++++
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~--~pDlVv~d~~~~~~ 157 (441)
T 2yjn_A 80 VDFMTHAGHDIIDYVRSLDFSERDPATLTWEHLLGMQTVLTPTFYALMSPDTLIEGMVSFCRKW--RPDLVIWEPLTFAA 157 (441)
T ss_dssp HHHHHHTTHHHHHHHTTCCCTTCCGGGGSHHHHHHHHHHHHHHTTTTSSCHHHHHHHHHHHHHH--CCSEEEECTTCTHH
T ss_pred HHHhhhhhcccccccccccccccCcchhhhhhhhhHHHHHHHHHHhhcchHHHHHHHHHHHHhc--CCCEEEecCcchhH
Confidence 0 00 00 011111 111111101 1 444444444432 99999999977889
Q ss_pred HHHHHHhCCceEEEecchhHHHHHHhhhhhhhhcCCcCCCCCCCCcccccCCCCCCCCCCCccccccCCCchhHHHHHHH
Q 011789 134 SKLAKKFGLYYISFWTESALVFTLYYHLDLLTINGHFQCYDCREDTIDYIPGVKAINPKDTTSYLQETDTTSACHQIIFN 213 (477)
Q Consensus 134 ~~~A~~~gIP~v~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 213 (477)
..+|+.+|||++.+...+.........+... . .+.|.. .. ...+.+.+.+
T Consensus 158 ~~aA~~lgiP~v~~~~~~~~~~~~~~~~~~~--~-------------~~~~~~---~~------------~~~~~~~l~~ 207 (441)
T 2yjn_A 158 PIAAAVTGTPHARLLWGPDITTRARQNFLGL--L-------------PDQPEE---HR------------EDPLAEWLTW 207 (441)
T ss_dssp HHHHHHHTCCEEEECSSCCHHHHHHHHHHHH--G-------------GGSCTT---TC------------CCHHHHHHHH
T ss_pred HHHHHHcCCCEEEEecCCCcchhhhhhhhhh--c-------------cccccc---cc------------cchHHHHHHH
Confidence 9999999999999965443211111000000 0 011100 00 0111112211
Q ss_pred Hhhhc---------cCCcEEEEcchhhccHHHHHHHHccCCEEEeCccCCCCCCccccccccCCccccchhhccCCCCcE
Q 011789 214 SFQDT---------RNADYVLCNTVHELESEAVTALKAKIPFITMGPISLNKFSDRVVATSLWSESDCSQWLDKQPKGSV 284 (477)
Q Consensus 214 ~~~~~---------~~~~~~l~~s~~~l~~~~~~~~~~~~p~~~vGp~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~ 284 (477)
..+.. ...+.++....+.++++ . .+|...+++..... + .++.+|++..+++++
T Consensus 208 ~~~~~g~~~~~~~~~~~~~~l~~~~~~~~~~-----~-~~~~~~~~~~~~~~----~--------~~~~~~l~~~~~~~~ 269 (441)
T 2yjn_A 208 TLEKYGGPAFDEEVVVGQWTIDPAPAAIRLD-----T-GLKTVGMRYVDYNG----P--------SVVPEWLHDEPERRR 269 (441)
T ss_dssp HHHHTTCCCCCGGGTSCSSEEECSCGGGSCC-----C-CCCEEECCCCCCCS----S--------CCCCGGGSSCCSSCE
T ss_pred HHHHcCCCCCCccccCCCeEEEecCccccCC-----C-CCCCCceeeeCCCC----C--------cccchHhhcCCCCCE
Confidence 11111 01344555554444421 1 11112233322111 1 456679887667789
Q ss_pred EEEEecccccC---CHHHHHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCchhHHHhcCCCeEEEeeccHHHhhccCCCC
Q 011789 285 LYVSFGSYAHV---SKRDLIEIANGIAKSKVTFIWILRPDIVSSDDPNPLPEDFKKEVADRSMIITWCCQTSVLAHPAIG 361 (477)
Q Consensus 285 I~vs~Gs~~~~---~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~lp~~~~~~~~~nv~v~~~~p~~~lL~~~~~~ 361 (477)
|||++||+... ..+.+..++++++..+.+++|.+++... ..+. ..++|+++.+|+||.++|+++++
T Consensus 270 v~v~~Gs~~~~~~~~~~~~~~~~~al~~~~~~~v~~~g~~~~-----~~l~-----~~~~~v~~~~~~~~~~ll~~ad~- 338 (441)
T 2yjn_A 270 VCLTLGISSRENSIGQVSIEELLGAVGDVDAEIIATFDAQQL-----EGVA-----NIPDNVRTVGFVPMHALLPTCAA- 338 (441)
T ss_dssp EEEEC----------CCSTTTTHHHHHTSSSEEEECCCTTTT-----SSCS-----SCCSSEEECCSCCHHHHGGGCSE-
T ss_pred EEEECCCCcccccChHHHHHHHHHHHHcCCCEEEEEECCcch-----hhhc-----cCCCCEEEecCCCHHHHHhhCCE-
Confidence 99999998653 2345677888998899999998875421 1121 13569999999999999999998
Q ss_pred ccccccCCchhhHHHhcCcceeccccccchhhHHHHHHhhhcceeeecCCC-CcCHHHHHHHHHHHhcCCchHHHHHHHH
Q 011789 362 GFLTHCGWNSVLEGLWCGVPLLCFPLYTDQFTNRKLAVDDWNVGLNLSNEK-VITKEEVSKNVHLLMGEKSGAKYRNAAK 440 (477)
Q Consensus 362 ~~ItHgG~gs~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~G~~~~~~~-~~~~~~l~~~i~~~l~~~~~~~~~~~a~ 440 (477)
||||||+||++||+++|||+|++|...||+.||+++++. |+|+.+. . +++.++|.++|.++|+|+ +|+++++
T Consensus 339 -~V~~~G~~t~~Ea~~~G~P~i~~p~~~dQ~~na~~l~~~-g~g~~~~--~~~~~~~~l~~~i~~ll~~~---~~~~~~~ 411 (441)
T 2yjn_A 339 -TVHHGGPGSWHTAAIHGVPQVILPDGWDTGVRAQRTQEF-GAGIALP--VPELTPDQLRESVKRVLDDP---AHRAGAA 411 (441)
T ss_dssp -EEECCCHHHHHHHHHTTCCEEECCCSHHHHHHHHHHHHH-TSEEECC--TTTCCHHHHHHHHHHHHHCH---HHHHHHH
T ss_pred -EEECCCHHHHHHHHHhCCCEEEeCCcccHHHHHHHHHHc-CCEEEcc--cccCCHHHHHHHHHHHhcCH---HHHHHHH
Confidence 999999999999999999999999999999999999999 9999993 2 789999999999999999 9999999
Q ss_pred HHHHHHHH
Q 011789 441 QVKKAMEY 448 (477)
Q Consensus 441 ~l~~~~~~ 448 (477)
++++++.+
T Consensus 412 ~~~~~~~~ 419 (441)
T 2yjn_A 412 RMRDDMLA 419 (441)
T ss_dssp HHHHHHHT
T ss_pred HHHHHHHc
Confidence 99999985
No 14
>2p6p_A Glycosyl transferase; X-RAY-diffraction,urdamycina-biosynthesis; 1.88A {Streptomyces fradiae}
Probab=100.00 E-value=1.4e-37 Score=310.23 Aligned_cols=338 Identities=13% Similarity=0.122 Sum_probs=238.8
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCcchhhh-ccCCCCCCccccccccCCCCCeEEEecCCCC-----
Q 011789 9 PHAIFISYPLQGHVNPSVQLALKLASQGFTITFVNTHFIHQQM-TKASPEMGSDIFAGVRKSGLDIRYMTLSDGL----- 82 (477)
Q Consensus 9 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~----- 82 (477)
|||+|++.++.||++|+++|+++|+++||+|++++++...+.+ .. ++++..++...
T Consensus 1 MrIl~~~~~~~Gh~~p~~~la~~L~~~Gh~V~~~~~~~~~~~~~~~------------------g~~~~~~~~~~~~~~~ 62 (384)
T 2p6p_A 1 MRILFVAAGSPATVFALAPLATAARNAGHQVVMAANQDMGPVVTGV------------------GLPAVATTDLPIRHFI 62 (384)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHT------------------TCCEEESCSSCHHHHH
T ss_pred CEEEEEeCCccchHhHHHHHHHHHHHCCCEEEEEeCHHHHHHHHhC------------------CCEEEEeCCcchHHHH
Confidence 7999999999999999999999999999999999998877666 44 56677776432
Q ss_pred -------CCCCCCCCcHHHHH-HH-HHHHhHHHHHHHHHHhHhcCCCccEEEecCCCcchHHHHHHhCCceEEEecchhH
Q 011789 83 -------PLGFDRSLNHEQFM-SS-LLHVFSAHAEEVIGQIVRSGENVHCLIADTYFVWPSKLAKKFGLYYISFWTESAL 153 (477)
Q Consensus 83 -------~~~~~~~~~~~~~~-~~-~~~~~~~~~~~ll~~~~~~~~~pD~iI~D~~~~~~~~~A~~~gIP~v~~~~~~~~ 153 (477)
+............+ .. +.......+..+.+.+.+. +||+||+|.+..++..+|+.+|||++.++..+.
T Consensus 63 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~--~pD~Vi~~~~~~~~~~~a~~~giP~v~~~~~~~- 139 (384)
T 2p6p_A 63 TTDREGRPEAIPSDPVAQARFTGRWFARMAASSLPRMLDFSRAW--RPDLIVGGTMSYVAPLLALHLGVPHARQTWDAV- 139 (384)
T ss_dssp HBCTTSCBCCCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--CCSEEEEETTCTHHHHHHHHHTCCEEEECCSSC-
T ss_pred hhhcccCccccCcchHHHHHHHHHHHHhhHHHHHHHHHHHHhcc--CCcEEEECcchhhHHHHHHhcCCCEEEeccCCc-
Confidence 00000100111111 21 1111222334444444333 999999998777888999999999998743210
Q ss_pred HHHHHhhhhhhhhcCCcCCCCCCCCcccccCCCCCCCCCCCccccccCCCchhHHHHHHHHhhh--ccCCcEEEEcchhh
Q 011789 154 VFTLYYHLDLLTINGHFQCYDCREDTIDYIPGVKAINPKDTTSYLQETDTTSACHQIIFNSFQD--TRNADYVLCNTVHE 231 (477)
Q Consensus 154 ~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~~s~~~ 231 (477)
...+ ....+ .....+... .+.. ...++.+++++.+.
T Consensus 140 ----------------------------~~~~--------~~~~~-----~~~~~~~~~-~~g~~~~~~~~~~l~~~~~~ 177 (384)
T 2p6p_A 140 ----------------------------DADG--------IHPGA-----DAELRPELS-ELGLERLPAPDLFIDICPPS 177 (384)
T ss_dssp ----------------------------CCTT--------THHHH-----HHHTHHHHH-HTTCSSCCCCSEEEECSCGG
T ss_pred ----------------------------ccch--------hhHHH-----HHHHHHHHH-HcCCCCCCCCCeEEEECCHH
Confidence 0000 00000 000111111 1111 11256788898888
Q ss_pred ccHHHHHHHHccC-C-EEEeCccCCCCCCccccccccCCccccchhhccCCCCcEEEEEecccccC-----CHHHHHHHH
Q 011789 232 LESEAVTALKAKI-P-FITMGPISLNKFSDRVVATSLWSESDCSQWLDKQPKGSVLYVSFGSYAHV-----SKRDLIEIA 304 (477)
Q Consensus 232 l~~~~~~~~~~~~-p-~~~vGp~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~I~vs~Gs~~~~-----~~~~~~~~~ 304 (477)
++++ .+.. + +.++++ .. + .++.+|++..+++++|||++||.... +.+.+..++
T Consensus 178 ~~~~-----~~~~~~~~~~~~~---~~----~--------~~~~~~l~~~~~~~~v~v~~Gs~~~~~~~~~~~~~~~~~~ 237 (384)
T 2p6p_A 178 LRPA-----NAAPARMMRHVAT---SR----Q--------CPLEPWMYTRDTRQRVLVTSGSRVAKESYDRNFDFLRGLA 237 (384)
T ss_dssp GSCT-----TSCCCEECCCCCC---CC----C--------CBCCHHHHCCCSSCEEEEECSSSSSCCSSCCCCTTHHHHH
T ss_pred HCCC-----CCCCCCceEecCC---CC----C--------CCCCchhhcCCCCCEEEEECCCCCccccccccHHHHHHHH
Confidence 8754 2221 1 333321 11 1 45567887755678999999998754 346688899
Q ss_pred HHHHhCCCeEEEEEcCCCCCCCCCCCCchhHHHhcCCCeEEEeeccHHHhhccCCCCccccccCCchhhHHHhcCcceec
Q 011789 305 NGIAKSKVTFIWILRPDIVSSDDPNPLPEDFKKEVADRSMIITWCCQTSVLAHPAIGGFLTHCGWNSVLEGLWCGVPLLC 384 (477)
Q Consensus 305 ~al~~~~~~~i~~~~~~~~~~~~~~~lp~~~~~~~~~nv~v~~~~p~~~lL~~~~~~~~ItHgG~gs~~eal~~GvP~v~ 384 (477)
+++++.+.+++|+.++.. .+.+ +..++|+.+ +|+||.++|+++++ ||||||+||+.||+++|+|+|+
T Consensus 238 ~al~~~~~~~~~~~g~~~---------~~~l-~~~~~~v~~-~~~~~~~~l~~~d~--~v~~~G~~t~~Ea~~~G~P~v~ 304 (384)
T 2p6p_A 238 KDLVRWDVELIVAAPDTV---------AEAL-RAEVPQARV-GWTPLDVVAPTCDL--LVHHAGGVSTLTGLSAGVPQLL 304 (384)
T ss_dssp HHHHTTTCEEEEECCHHH---------HHHH-HHHCTTSEE-ECCCHHHHGGGCSE--EEECSCTTHHHHHHHTTCCEEE
T ss_pred HHHhcCCcEEEEEeCCCC---------HHhh-CCCCCceEE-cCCCHHHHHhhCCE--EEeCCcHHHHHHHHHhCCCEEE
Confidence 999999999999876421 1122 235789999 99999999999998 9999999999999999999999
Q ss_pred cccccchhhHHHHHHhhhcceeeecCCC-CcCHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHH
Q 011789 385 FPLYTDQFTNRKLAVDDWNVGLNLSNEK-VITKEEVSKNVHLLMGEKSGAKYRNAAKQVKKAMEY 448 (477)
Q Consensus 385 ~P~~~DQ~~na~~v~~~~G~G~~~~~~~-~~~~~~l~~~i~~~l~~~~~~~~~~~a~~l~~~~~~ 448 (477)
+|...||+.||.++++. |+|+.+. . +++.++|.++|+++|+|+ +|+++++++++++++
T Consensus 305 ~p~~~dq~~~a~~~~~~-g~g~~~~--~~~~~~~~l~~~i~~ll~~~---~~~~~~~~~~~~~~~ 363 (384)
T 2p6p_A 305 IPKGSVLEAPARRVADY-GAAIALL--PGEDSTEAIADSCQELQAKD---TYARRAQDLSREISG 363 (384)
T ss_dssp CCCSHHHHHHHHHHHHH-TSEEECC--TTCCCHHHHHHHHHHHHHCH---HHHHHHHHHHHHHHT
T ss_pred ccCcccchHHHHHHHHC-CCeEecC--cCCCCHHHHHHHHHHHHcCH---HHHHHHHHHHHHHHh
Confidence 99999999999999999 9999993 2 679999999999999999 999999999999986
No 15
>2iyf_A OLED, oleandomycin glycosyltransferase; antibiotic resistance, glycosylation, enzyme, macrolide, carbohydrate; HET: ERY UDP; 1.7A {Streptomyces antibioticus}
Probab=100.00 E-value=7.9e-38 Score=316.76 Aligned_cols=364 Identities=16% Similarity=0.189 Sum_probs=246.2
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCcchhhh-ccCCCCCCccccccccCCCCCeEEEecCCCCCC
Q 011789 6 TQKPHAIFISYPLQGHVNPSVQLALKLASQGFTITFVNTHFIHQQM-TKASPEMGSDIFAGVRKSGLDIRYMTLSDGLPL 84 (477)
Q Consensus 6 ~~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 84 (477)
.+||||+|++.++.||++|++.|+++|+++||+|++++++...+.+ .. ++++..++...+.
T Consensus 5 m~m~kIl~~~~~~~Gh~~p~~~la~~L~~~G~~V~~~~~~~~~~~~~~~------------------g~~~~~~~~~~~~ 66 (430)
T 2iyf_A 5 TTPAHIAMFSIAAHGHVNPSLEVIRELVARGHRVTYAIPPVFADKVAAT------------------GPRPVLYHSTLPG 66 (430)
T ss_dssp ---CEEEEECCSCHHHHGGGHHHHHHHHHTTCEEEEEECGGGHHHHHTT------------------SCEEEECCCCSCC
T ss_pred cccceEEEEeCCCCccccchHHHHHHHHHCCCeEEEEeCHHHHHHHHhC------------------CCEEEEcCCcCcc
Confidence 3578999999999999999999999999999999999999887666 44 6788888864432
Q ss_pred CCCC----CCcHHHHHHHHHHHhHHHHHHHHHHhHhcCCCccEEEecCCCcchHHHHHHhCCceEEEecchhHHHHHHhh
Q 011789 85 GFDR----SLNHEQFMSSLLHVFSAHAEEVIGQIVRSGENVHCLIADTYFVWPSKLAKKFGLYYISFWTESALVFTLYYH 160 (477)
Q Consensus 85 ~~~~----~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~pD~iI~D~~~~~~~~~A~~~gIP~v~~~~~~~~~~~~~~~ 160 (477)
.... ..++...+..+.......+..+.+.+.+. +||+||+|...+++..+|+++|||++.+++....... +..
T Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~--~pD~Vi~d~~~~~~~~~A~~~giP~v~~~~~~~~~~~-~~~ 143 (430)
T 2iyf_A 67 PDADPEAWGSTLLDNVEPFLNDAIQALPQLADAYADD--IPDLVLHDITSYPARVLARRWGVPAVSLSPNLVAWKG-YEE 143 (430)
T ss_dssp TTSCGGGGCSSHHHHHHHHHHHHHHHHHHHHHHHTTS--CCSEEEEETTCHHHHHHHHHHTCCEEEEESSCCCCTT-HHH
T ss_pred ccccccccchhhHHHHHHHHHHHHHHHHHHHHHhhcc--CCCEEEECCccHHHHHHHHHcCCCEEEEecccccccc-ccc
Confidence 2111 12333333333232333344454444443 9999999987778999999999999999765431000 000
Q ss_pred hhhhhhcCCcCCCCCCCCcccccCCCCCCCCCCCccccccCCCchhHHHHHHHH------hhhccCCcEEEEcchhhccH
Q 011789 161 LDLLTINGHFQCYDCREDTIDYIPGVKAINPKDTTSYLQETDTTSACHQIIFNS------FQDTRNADYVLCNTVHELES 234 (477)
Q Consensus 161 ~~~~~~~~~~p~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~l~~s~~~l~~ 234 (477)
... .. ..+...+.. .. .++ ...+.+.+.+. .+....++.+++++.+.+++
T Consensus 144 ~~~---~~-------------~~~~~~~~~--~~-~~~-----~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~ 199 (430)
T 2iyf_A 144 EVA---EP-------------MWREPRQTE--RG-RAY-----YARFEAWLKENGITEHPDTFASHPPRSLVLIPKALQP 199 (430)
T ss_dssp HTH---HH-------------HHHHHHHSH--HH-HHH-----HHHHHHHHHHTTCCSCHHHHHHCCSSEEECSCGGGST
T ss_pred ccc---cc-------------hhhhhccch--HH-HHH-----HHHHHHHHHHhCCCCCHHHHhcCCCcEEEeCcHHhCC
Confidence 000 00 000000000 00 000 00011111110 01112467889999888875
Q ss_pred HHHHHHHccC-C-EEEeCccCCCCCCccccccccCCccccchhhccCCCCcEEEEEecccccCCHHHHHHHHHHHHhC-C
Q 011789 235 EAVTALKAKI-P-FITMGPISLNKFSDRVVATSLWSESDCSQWLDKQPKGSVLYVSFGSYAHVSKRDLIEIANGIAKS-K 311 (477)
Q Consensus 235 ~~~~~~~~~~-p-~~~vGp~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~I~vs~Gs~~~~~~~~~~~~~~al~~~-~ 311 (477)
+. .... . ++++||...... +..+|.+..+++++|||++||......+.+..++++++.. +
T Consensus 200 ~~----~~~~~~~v~~vG~~~~~~~-------------~~~~~~~~~~~~~~v~v~~Gs~~~~~~~~~~~~~~~l~~~~~ 262 (430)
T 2iyf_A 200 HA----DRVDEDVYTFVGACQGDRA-------------EEGGWQRPAGAEKVVLVSLGSAFTKQPAFYRECVRAFGNLPG 262 (430)
T ss_dssp TG----GGSCTTTEEECCCCC------------------CCCCCCCTTCSEEEEEECTTTCC-CHHHHHHHHHHHTTCTT
T ss_pred Cc----ccCCCccEEEeCCcCCCCC-------------CCCCCccccCCCCeEEEEcCCCCCCcHHHHHHHHHHHhcCCC
Confidence 41 1222 3 889998654221 1123544445678999999999855677888899999885 7
Q ss_pred CeEEEEEcCCCCCCCCCCCCchhHHHhcCCCeEEEeeccHHHhhccCCCCccccccCCchhhHHHhcCcceeccccccch
Q 011789 312 VTFIWILRPDIVSSDDPNPLPEDFKKEVADRSMIITWCCQTSVLAHPAIGGFLTHCGWNSVLEGLWCGVPLLCFPLYTDQ 391 (477)
Q Consensus 312 ~~~i~~~~~~~~~~~~~~~lp~~~~~~~~~nv~v~~~~p~~~lL~~~~~~~~ItHgG~gs~~eal~~GvP~v~~P~~~DQ 391 (477)
.+++|.++.+.. .+.+ +.+++|+.+.+|+||.++|+++++ ||||||+||+.||+++|+|+|++|...||
T Consensus 263 ~~~~~~~G~~~~--------~~~l-~~~~~~v~~~~~~~~~~~l~~ad~--~v~~~G~~t~~Ea~~~G~P~i~~p~~~~q 331 (430)
T 2iyf_A 263 WHLVLQIGRKVT--------PAEL-GELPDNVEVHDWVPQLAILRQADL--FVTHAGAGGSQEGLATATPMIAVPQAVDQ 331 (430)
T ss_dssp EEEEEECC---C--------GGGG-CSCCTTEEEESSCCHHHHHTTCSE--EEECCCHHHHHHHHHTTCCEEECCCSHHH
T ss_pred eEEEEEeCCCCC--------hHHh-ccCCCCeEEEecCCHHHHhhccCE--EEECCCccHHHHHHHhCCCEEECCCccch
Confidence 888888875421 1111 124579999999999999999998 99999999999999999999999999999
Q ss_pred hhHHHHHHhhhcceeeecCCC-CcCHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHH
Q 011789 392 FTNRKLAVDDWNVGLNLSNEK-VITKEEVSKNVHLLMGEKSGAKYRNAAKQVKKAMEY 448 (477)
Q Consensus 392 ~~na~~v~~~~G~G~~~~~~~-~~~~~~l~~~i~~~l~~~~~~~~~~~a~~l~~~~~~ 448 (477)
+.|+.++++. |+|+.+. . +++.++|.++|.++|+|+ ++++++.++++++.+
T Consensus 332 ~~~a~~~~~~-g~g~~~~--~~~~~~~~l~~~i~~ll~~~---~~~~~~~~~~~~~~~ 383 (430)
T 2iyf_A 332 FGNADMLQGL-GVARKLA--TEEATADLLRETALALVDDP---EVARRLRRIQAEMAQ 383 (430)
T ss_dssp HHHHHHHHHT-TSEEECC--CC-CCHHHHHHHHHHHHHCH---HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHc-CCEEEcC--CCCCCHHHHHHHHHHHHcCH---HHHHHHHHHHHHHHh
Confidence 9999999999 9999993 2 679999999999999999 999999999999886
No 16
>4fzr_A SSFS6; structural genomics, PSI-biology, protein structure initiati enzyme discovery for natural product biosynthesis, natPro; 2.40A {Streptomyces SP} PDB: 4g2t_A*
Probab=100.00 E-value=2.6e-36 Score=302.55 Aligned_cols=343 Identities=14% Similarity=0.173 Sum_probs=221.4
Q ss_pred CCCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCcchhhh-ccCCCCCCccccccccCCCCCeEEEecCCCCC
Q 011789 5 KTQKPHAIFISYPLQGHVNPSVQLALKLASQGFTITFVNTHFIHQQM-TKASPEMGSDIFAGVRKSGLDIRYMTLSDGLP 83 (477)
Q Consensus 5 ~~~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 83 (477)
+..+|||+|++.++.||++|++.|+++|+++||+|++++++.+.+.+ .. ++.+..++....
T Consensus 12 ~~~~MrIl~~~~~~~gh~~~~~~La~~L~~~GheV~v~~~~~~~~~~~~~------------------G~~~~~~~~~~~ 73 (398)
T 4fzr_A 12 RGSHMRILVIAGCSEGFVMPLVPLSWALRAAGHEVLVAASENMGPTVTGA------------------GLPFAPTCPSLD 73 (398)
T ss_dssp ---CCEEEEECCSSHHHHGGGHHHHHHHHHTTCEEEEEEEGGGHHHHHHT------------------TCCEEEEESSCC
T ss_pred CCCceEEEEEcCCCcchHHHHHHHHHHHHHCCCEEEEEcCHHHHHHHHhC------------------CCeeEecCCccc
Confidence 35679999999999999999999999999999999999998888777 56 555666652110
Q ss_pred ---------CC--CCCCCcHHH----HHHHHHHHhHHHHHHHHHHhHhcCCCccEEEecCCCcchHHHHHHhCCceEEEe
Q 011789 84 ---------LG--FDRSLNHEQ----FMSSLLHVFSAHAEEVIGQIVRSGENVHCLIADTYFVWPSKLAKKFGLYYISFW 148 (477)
Q Consensus 84 ---------~~--~~~~~~~~~----~~~~~~~~~~~~~~~ll~~~~~~~~~pD~iI~D~~~~~~~~~A~~~gIP~v~~~ 148 (477)
.. ......... ....+.......+..+.+.+.+. +||+||+|...+++..+|+.+|||++.+.
T Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~--~pDlVv~d~~~~~~~~~a~~~giP~v~~~ 151 (398)
T 4fzr_A 74 MPEVLSWDREGNRTTMPREEKPLLEHIGRGYGRLVLRMRDEALALAERW--KPDLVLTETYSLTGPLVAATLGIPWIEQS 151 (398)
T ss_dssp HHHHHSBCTTSCBCCCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--CCSEEEEETTCTHHHHHHHHHTCCEEEEC
T ss_pred hHhhhhhhccCcccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHhC--CCCEEEECccccHHHHHHHhhCCCEEEec
Confidence 00 000011111 11111122222333343333332 99999999877889999999999999875
Q ss_pred cchhHHHHHHhhhhhhhhcCCcCCCCCCCCcccccCCCCCCCCCCCccccccCCCchhHHHHHHHHhh-----hccCCcE
Q 011789 149 TESALVFTLYYHLDLLTINGHFQCYDCREDTIDYIPGVKAINPKDTTSYLQETDTTSACHQIIFNSFQ-----DTRNADY 223 (477)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~ 223 (477)
.......... ....+++..... .....+.
T Consensus 152 ~~~~~~~~~~----------------------------------------------~~~~~~l~~~~~~~~~~~~~~~~~ 185 (398)
T 4fzr_A 152 IRLASPELIK----------------------------------------------SAGVGELAPELAELGLTDFPDPLL 185 (398)
T ss_dssp CSSCCCHHHH----------------------------------------------HHHHHHTHHHHHTTTCSSCCCCSE
T ss_pred cCCCCchhhh----------------------------------------------HHHHHHHHHHHHHcCCCCCCCCCe
Confidence 4321110000 000111111110 1122344
Q ss_pred EEEcchhhccHHHHHHHHccCCEEEeCccCCCCCCccccccccCCccccchhhccCCCCcEEEEEecccccC--------
Q 011789 224 VLCNTVHELESEAVTALKAKIPFITMGPISLNKFSDRVVATSLWSESDCSQWLDKQPKGSVLYVSFGSYAHV-------- 295 (477)
Q Consensus 224 ~l~~s~~~l~~~~~~~~~~~~p~~~vGp~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~I~vs~Gs~~~~-------- 295 (477)
.+....+.++.+ ... +...+.+...... . .++.+|+...+++++|||++||....
T Consensus 186 ~~~~~~~~~~~~-----~~~-~~~~~~~~~~~~~---~--------~~~~~~~~~~~~~~~v~v~~G~~~~~~~~~~~~~ 248 (398)
T 4fzr_A 186 SIDVCPPSMEAQ-----PKP-GTTKMRYVPYNGR---N--------DQVPSWVFEERKQPRLCLTFGTRVPLPNTNTIPG 248 (398)
T ss_dssp EEECSCGGGC---------C-CCEECCCCCCCCS---S--------CCCCHHHHSCCSSCEEECC---------------
T ss_pred EEEeCChhhCCC-----CCC-CCCCeeeeCCCCC---C--------CCCchhhhcCCCCCEEEEEccCcccccccccccc
Confidence 555555555543 111 1122221111101 0 44556777656778999999998643
Q ss_pred CHHHHHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCchhHHHhcCCCeEEEeeccHHHhhccCCCCccccccCCchhhHH
Q 011789 296 SKRDLIEIANGIAKSKVTFIWILRPDIVSSDDPNPLPEDFKKEVADRSMIITWCCQTSVLAHPAIGGFLTHCGWNSVLEG 375 (477)
Q Consensus 296 ~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~lp~~~~~~~~~nv~v~~~~p~~~lL~~~~~~~~ItHgG~gs~~ea 375 (477)
....+..+++++++.+.+++|..++... ..+ +..++|+++.+|+|+.++|+++++ ||||||.||+.||
T Consensus 249 ~~~~~~~~~~al~~~~~~~v~~~~~~~~-----~~l-----~~~~~~v~~~~~~~~~~ll~~ad~--~v~~gG~~t~~Ea 316 (398)
T 4fzr_A 249 GLSLLQALSQELPKLGFEVVVAVSDKLA-----QTL-----QPLPEGVLAAGQFPLSAIMPACDV--VVHHGGHGTTLTC 316 (398)
T ss_dssp -CCSHHHHHHHGGGGTCEEEECCCC------------------CCTTEEEESCCCHHHHGGGCSE--EEECCCHHHHHHH
T ss_pred hHHHHHHHHHHHHhCCCEEEEEeCCcch-----hhh-----ccCCCcEEEeCcCCHHHHHhhCCE--EEecCCHHHHHHH
Confidence 2345788999999899999998775421 111 134679999999999999999998 9999999999999
Q ss_pred HhcCcceeccccccchhhHHHHHHhhhcceeeecCCC-CcCHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHH
Q 011789 376 LWCGVPLLCFPLYTDQFTNRKLAVDDWNVGLNLSNEK-VITKEEVSKNVHLLMGEKSGAKYRNAAKQVKKAMEY 448 (477)
Q Consensus 376 l~~GvP~v~~P~~~DQ~~na~~v~~~~G~G~~~~~~~-~~~~~~l~~~i~~~l~~~~~~~~~~~a~~l~~~~~~ 448 (477)
+++|+|+|++|...||+.|+.++++. |+|+.+. . +++.+.|.++|.++|+|+ +|++++.+.++++.+
T Consensus 317 ~~~G~P~v~~p~~~~q~~~a~~~~~~-g~g~~~~--~~~~~~~~l~~ai~~ll~~~---~~~~~~~~~~~~~~~ 384 (398)
T 4fzr_A 317 LSEGVPQVSVPVIAEVWDSARLLHAA-GAGVEVP--WEQAGVESVLAACARIRDDS---SYVGNARRLAAEMAT 384 (398)
T ss_dssp HHTTCCEEECCCSGGGHHHHHHHHHT-TSEEECC---------CHHHHHHHHHHCT---HHHHHHHHHHHHHTT
T ss_pred HHhCCCEEecCCchhHHHHHHHHHHc-CCEEecC--cccCCHHHHHHHHHHHHhCH---HHHHHHHHHHHHHHc
Confidence 99999999999999999999999999 9999993 2 779999999999999999 999999999999875
No 17
>3oti_A CALG3; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD C0T; 1.60A {Micromonospora echinospora} PDB: 3d0q_A* 3d0r_A*
Probab=100.00 E-value=1.3e-35 Score=297.38 Aligned_cols=337 Identities=14% Similarity=0.142 Sum_probs=229.8
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCcchhhh-ccCCCCCCccccccccCCCCCeEEEecCCCCC-
Q 011789 6 TQKPHAIFISYPLQGHVNPSVQLALKLASQGFTITFVNTHFIHQQM-TKASPEMGSDIFAGVRKSGLDIRYMTLSDGLP- 83 (477)
Q Consensus 6 ~~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~- 83 (477)
..+|||+|++.++.||++|++.|+++|.++||+|+++++ .+.+.+ .. ++.+..++....
T Consensus 18 ~~~MrIl~~~~~~~Ghv~~~~~La~~L~~~GheV~v~~~-~~~~~~~~~------------------G~~~~~~~~~~~~ 78 (398)
T 3oti_A 18 GRHMRVLFVSSPGIGHLFPLIQLAWGFRTAGHDVLIAVA-EHADRAAAA------------------GLEVVDVAPDYSA 78 (398)
T ss_dssp -CCCEEEEECCSSHHHHGGGHHHHHHHHHTTCEEEEEES-SCHHHHHTT------------------TCEEEESSTTCCH
T ss_pred hhcCEEEEEcCCCcchHhHHHHHHHHHHHCCCEEEEecc-chHHHHHhC------------------CCeeEecCCccCH
Confidence 456899999999999999999999999999999999999 776666 55 788888874311
Q ss_pred --------------------CCCCCCCcHHHHHHHHHHHhHHHHHHHHHHhHhcCCCccEEEecCCCcchHHHHHHhCCc
Q 011789 84 --------------------LGFDRSLNHEQFMSSLLHVFSAHAEEVIGQIVRSGENVHCLIADTYFVWPSKLAKKFGLY 143 (477)
Q Consensus 84 --------------------~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~pD~iI~D~~~~~~~~~A~~~gIP 143 (477)
............+..........+.++++++ +||+||+|..++++..+|+.+|||
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-----~pDlVv~d~~~~~~~~aA~~~giP 153 (398)
T 3oti_A 79 VKVFEQVAKDNPRFAETVATRPAIDLEEWGVQIAAVNRPLVDGTMALVDDY-----RPDLVVYEQGATVGLLAADRAGVP 153 (398)
T ss_dssp HHHHHHHHHHCHHHHHTGGGSCCCSGGGGHHHHHHHHGGGHHHHHHHHHHH-----CCSEEEEETTCHHHHHHHHHHTCC
T ss_pred HHHhhhcccCCccccccccCChhhhHHHHHHHHHHHHHHHHHHHHHHHHHc-----CCCEEEECchhhHHHHHHHHcCCC
Confidence 0011111222222222223334444555554 999999998888899999999999
Q ss_pred eEEEecchhHHHHHHhhhhhhhhcCCcCCCCCCCCcccccCCCCCCCCCCCccccccCCCchhHHHHHHHHhhhccCCcE
Q 011789 144 YISFWTESALVFTLYYHLDLLTINGHFQCYDCREDTIDYIPGVKAINPKDTTSYLQETDTTSACHQIIFNSFQDTRNADY 223 (477)
Q Consensus 144 ~v~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (477)
++.+....... ... ..... ..+...+.+..-.....+.
T Consensus 154 ~v~~~~~~~~~-----------------------------~~~--------~~~~~-----~~l~~~~~~~~~~~~~~~~ 191 (398)
T 3oti_A 154 AVQRNQSAWRT-----------------------------RGM--------HRSIA-----SFLTDLMDKHQVSLPEPVA 191 (398)
T ss_dssp EEEECCTTCCC-----------------------------TTH--------HHHHH-----TTCHHHHHHTTCCCCCCSE
T ss_pred EEEEeccCCCc-----------------------------cch--------hhHHH-----HHHHHHHHHcCCCCCCCCe
Confidence 99874321100 000 00000 0001111110000122344
Q ss_pred EEEcchhhccHHHHHHHHccCCEEEeCccCCCCCCccccccccCCccccchhhccCCCCcEEEEEecccccC--CHHHHH
Q 011789 224 VLCNTVHELESEAVTALKAKIPFITMGPISLNKFSDRVVATSLWSESDCSQWLDKQPKGSVLYVSFGSYAHV--SKRDLI 301 (477)
Q Consensus 224 ~l~~s~~~l~~~~~~~~~~~~p~~~vGp~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~I~vs~Gs~~~~--~~~~~~ 301 (477)
.+....+.+..+. .....|+.++ ..... ..+.+|+...+++++|||++||.... ....+.
T Consensus 192 ~~~~~~~~~~~~~---~~~~~~~~~~---~~~~~------------~~~~~~~~~~~~~~~v~v~~G~~~~~~~~~~~~~ 253 (398)
T 3oti_A 192 TIESFPPSLLLEA---EPEGWFMRWV---PYGGG------------AVLGDRLPPVPARPEVAITMGTIELQAFGIGAVE 253 (398)
T ss_dssp EECSSCGGGGTTS---CCCSBCCCCC---CCCCC------------EECCSSCCCCCSSCEEEECCTTTHHHHHCGGGHH
T ss_pred EEEeCCHHHCCCC---CCCCCCcccc---CCCCC------------cCCchhhhcCCCCCEEEEEcCCCccccCcHHHHH
Confidence 5544444444220 0011112211 10111 34445766656778999999999532 456678
Q ss_pred HHHHHHHhCCCeEEEEEcCCCCCCCCCCCCchhHHHhcCCCeEEEeeccHHHhhccCCCCccccccCCchhhHHHhcCcc
Q 011789 302 EIANGIAKSKVTFIWILRPDIVSSDDPNPLPEDFKKEVADRSMIITWCCQTSVLAHPAIGGFLTHCGWNSVLEGLWCGVP 381 (477)
Q Consensus 302 ~~~~al~~~~~~~i~~~~~~~~~~~~~~~lp~~~~~~~~~nv~v~~~~p~~~lL~~~~~~~~ItHgG~gs~~eal~~GvP 381 (477)
.+++++++.+.+++|+.++... ..+ +..++|+++.+|+|+.++|+++++ ||||||.||+.||+++|+|
T Consensus 254 ~~~~~l~~~~~~~v~~~g~~~~-----~~l-----~~~~~~v~~~~~~~~~~ll~~ad~--~v~~~G~~t~~Eal~~G~P 321 (398)
T 3oti_A 254 PIIAAAGEVDADFVLALGDLDI-----SPL-----GTLPRNVRAVGWTPLHTLLRTCTA--VVHHGGGGTVMTAIDAGIP 321 (398)
T ss_dssp HHHHHHHTSSSEEEEECTTSCC-----GGG-----CSCCTTEEEESSCCHHHHHTTCSE--EEECCCHHHHHHHHHHTCC
T ss_pred HHHHHHHcCCCEEEEEECCcCh-----hhh-----ccCCCcEEEEccCCHHHHHhhCCE--EEECCCHHHHHHHHHhCCC
Confidence 8999999999999999876521 111 124579999999999999999998 9999999999999999999
Q ss_pred eeccccccchhhHH--HHHHhhhcceeeecCCC-CcCHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHH
Q 011789 382 LLCFPLYTDQFTNR--KLAVDDWNVGLNLSNEK-VITKEEVSKNVHLLMGEKSGAKYRNAAKQVKKAMEY 448 (477)
Q Consensus 382 ~v~~P~~~DQ~~na--~~v~~~~G~G~~~~~~~-~~~~~~l~~~i~~~l~~~~~~~~~~~a~~l~~~~~~ 448 (477)
+|++|...||+.|| .++++. |+|+.+. . +.+.+.|. ++|+|+ +|+++++++++++.+
T Consensus 322 ~v~~p~~~dq~~~a~~~~~~~~-g~g~~~~--~~~~~~~~l~----~ll~~~---~~~~~~~~~~~~~~~ 381 (398)
T 3oti_A 322 QLLAPDPRDQFQHTAREAVSRR-GIGLVST--SDKVDADLLR----RLIGDE---SLRTAAREVREEMVA 381 (398)
T ss_dssp EEECCCTTCCSSCTTHHHHHHH-TSEEECC--GGGCCHHHHH----HHHHCH---HHHHHHHHHHHHHHT
T ss_pred EEEcCCCchhHHHHHHHHHHHC-CCEEeeC--CCCCCHHHHH----HHHcCH---HHHHHHHHHHHHHHh
Confidence 99999999999999 999999 9999994 2 67888776 788999 999999999999986
No 18
>3tsa_A SPNG, NDP-rhamnosyltransferase; glycosyltransferase; HET: GLC; 1.70A {Saccharopolyspora spinosa} PDB: 3uyk_A* 3uyl_A*
Probab=100.00 E-value=1.8e-34 Score=288.42 Aligned_cols=338 Identities=13% Similarity=0.184 Sum_probs=229.4
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCcchhhh-ccCCCCCCccccccccCCCCCeEEEec-CCCCC--
Q 011789 8 KPHAIFISYPLQGHVNPSVQLALKLASQGFTITFVNTHFIHQQM-TKASPEMGSDIFAGVRKSGLDIRYMTL-SDGLP-- 83 (477)
Q Consensus 8 ~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~l-~~~~~-- 83 (477)
+|||+|++.++.||++|++.|+++|+++||+|++++++.+.+.+ .. ++.+..+ .....
T Consensus 1 ~MrIl~~~~~~~gh~~~~~~la~~L~~~GheV~v~~~~~~~~~~~~~------------------g~~~~~~~~~~~~~~ 62 (391)
T 3tsa_A 1 HMRVLVVPLPYPTHLMAMVPLCWALQASGHEVLIAAPPELQATAHGA------------------GLTTAGIRGNDRTGD 62 (391)
T ss_dssp CCEEEEECCSCHHHHHTTHHHHHHHHHTTCEEEEEECHHHHHHHHHB------------------TCEEEEC--------
T ss_pred CcEEEEEcCCCcchhhhHHHHHHHHHHCCCEEEEecChhhHHHHHhC------------------CCceeeecCCccchh
Confidence 48999999999999999999999999999999999998877777 56 5666666 32110
Q ss_pred --------CC---C--CCCCcHHHHHHHHHHHh----HHHHHHHHHHhHhcCCCccEEEecCCCcchHHHHHHhCCceEE
Q 011789 84 --------LG---F--DRSLNHEQFMSSLLHVF----SAHAEEVIGQIVRSGENVHCLIADTYFVWPSKLAKKFGLYYIS 146 (477)
Q Consensus 84 --------~~---~--~~~~~~~~~~~~~~~~~----~~~~~~ll~~~~~~~~~pD~iI~D~~~~~~~~~A~~~gIP~v~ 146 (477)
.. . .........+....... ..++..+.+.+.+. +||+||+|...+.+..+|+.+|||++.
T Consensus 63 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~--~PD~Vv~~~~~~~~~~aa~~~giP~v~ 140 (391)
T 3tsa_A 63 TGGTTQLRFPNPAFGQRDTEAGRQLWEQTASNVAQSSLDQLPEYLRLAEAW--RPSVLLVDVCALIGRVLGGLLDLPVVL 140 (391)
T ss_dssp ------CCSCCGGGGCTTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--CCSEEEEETTCHHHHHHHHHTTCCEEE
T ss_pred hhhhhcccccccccccccchhHHHHHHHHHHHHhhcchhhHHHHHHHHHhc--CCCEEEeCcchhHHHHHHHHhCCCEEE
Confidence 00 0 00011122222221222 11133333433333 999999998777888899999999998
Q ss_pred EecchhHHHHHHhhhhhhhhcCCcCCCCCCCCcccccCCCCCCCCCCCccccccCCCchhHHHHHHHHhhhc-----cCC
Q 011789 147 FWTESALVFTLYYHLDLLTINGHFQCYDCREDTIDYIPGVKAINPKDTTSYLQETDTTSACHQIIFNSFQDT-----RNA 221 (477)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~ 221 (477)
+....... .. ........++......+ ...
T Consensus 141 ~~~~~~~~-----------------------------~~----------------~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (391)
T 3tsa_A 141 HRWGVDPT-----------------------------AG----------------PFSDRAHELLDPVCRHHGLTGLPTP 175 (391)
T ss_dssp ECCSCCCT-----------------------------TT----------------HHHHHHHHHHHHHHHHTTSSSSCCC
T ss_pred EecCCccc-----------------------------cc----------------cccchHHHHHHHHHHHcCCCCCCCC
Confidence 74321100 00 00011222222221111 122
Q ss_pred cEEEEcchhhccHHHHHHHHccCC--EEEeCccCCCCCCccccccccCCccccchhhccCCCCcEEEEEeccccc--CC-
Q 011789 222 DYVLCNTVHELESEAVTALKAKIP--FITMGPISLNKFSDRVVATSLWSESDCSQWLDKQPKGSVLYVSFGSYAH--VS- 296 (477)
Q Consensus 222 ~~~l~~s~~~l~~~~~~~~~~~~p--~~~vGp~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~I~vs~Gs~~~--~~- 296 (477)
+..+....++++.. ..... +.++ |. ... ..+.+|+...+++++|||++||... ..
T Consensus 176 ~~~~~~~~~~~~~~-----~~~~~~~~~~~-p~--~~~------------~~~~~~~~~~~~~~~vlv~~G~~~~~~~~~ 235 (391)
T 3tsa_A 176 ELILDPCPPSLQAS-----DAPQGAPVQYV-PY--NGS------------GAFPAWGAARTSARRVCICMGRMVLNATGP 235 (391)
T ss_dssp SEEEECSCGGGSCT-----TSCCCEECCCC-CC--CCC------------EECCGGGSSCCSSEEEEEECCHHHHHHHCS
T ss_pred ceEEEecChhhcCC-----CCCccCCeeee-cC--CCC------------cCCCchhhcCCCCCEEEEEcCCCCCcccch
Confidence 55555555555432 11111 2222 11 111 3444577665677899999999842 23
Q ss_pred HHHHHHHHHHHHhC-CCeEEEEEcCCCCCCCCCCCCchhHHHhcCCCeEEEeeccHHHhhccCCCCccccccCCchhhHH
Q 011789 297 KRDLIEIANGIAKS-KVTFIWILRPDIVSSDDPNPLPEDFKKEVADRSMIITWCCQTSVLAHPAIGGFLTHCGWNSVLEG 375 (477)
Q Consensus 297 ~~~~~~~~~al~~~-~~~~i~~~~~~~~~~~~~~~lp~~~~~~~~~nv~v~~~~p~~~lL~~~~~~~~ItHgG~gs~~ea 375 (477)
...+..++++ ++. +.+++|..++... ..+. ..++|+++.+|+|+.++|+++++ ||||||.||+.||
T Consensus 236 ~~~~~~~~~~-~~~p~~~~v~~~~~~~~-----~~l~-----~~~~~v~~~~~~~~~~ll~~ad~--~v~~~G~~t~~Ea 302 (391)
T 3tsa_A 236 APLLRAVAAA-TELPGVEAVIAVPPEHR-----ALLT-----DLPDNARIAESVPLNLFLRTCEL--VICAGGSGTAFTA 302 (391)
T ss_dssp HHHHHHHHHH-HTSTTEEEEEECCGGGG-----GGCT-----TCCTTEEECCSCCGGGTGGGCSE--EEECCCHHHHHHH
T ss_pred HHHHHHHHHh-ccCCCeEEEEEECCcch-----hhcc-----cCCCCEEEeccCCHHHHHhhCCE--EEeCCCHHHHHHH
Confidence 6778888888 777 7888888765411 1111 23569999999999999999998 9999999999999
Q ss_pred HhcCcceeccccccchhhHHHHHHhhhcceeeecC--CCCcCHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHH
Q 011789 376 LWCGVPLLCFPLYTDQFTNRKLAVDDWNVGLNLSN--EKVITKEEVSKNVHLLMGEKSGAKYRNAAKQVKKAMEY 448 (477)
Q Consensus 376 l~~GvP~v~~P~~~DQ~~na~~v~~~~G~G~~~~~--~~~~~~~~l~~~i~~~l~~~~~~~~~~~a~~l~~~~~~ 448 (477)
+++|+|+|++|...||+.|+.++++. |+|+.+.. + +.+.+.|.+++.++|+|+ ++++++.++++++.+
T Consensus 303 ~~~G~P~v~~p~~~~q~~~a~~~~~~-g~g~~~~~~~~-~~~~~~l~~ai~~ll~~~---~~~~~~~~~~~~~~~ 372 (391)
T 3tsa_A 303 TRLGIPQLVLPQYFDQFDYARNLAAA-GAGICLPDEQA-QSDHEQFTDSIATVLGDT---GFAAAAIKLSDEITA 372 (391)
T ss_dssp HHTTCCEEECCCSTTHHHHHHHHHHT-TSEEECCSHHH-HTCHHHHHHHHHHHHTCT---HHHHHHHHHHHHHHT
T ss_pred HHhCCCEEecCCcccHHHHHHHHHHc-CCEEecCcccc-cCCHHHHHHHHHHHHcCH---HHHHHHHHHHHHHHc
Confidence 99999999999999999999999999 99999942 1 278999999999999999 999999999999975
No 19
>3otg_A CALG1; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD; 2.08A {Micromonospora echinospora} PDB: 3oth_A*
Probab=100.00 E-value=2.5e-32 Score=274.56 Aligned_cols=355 Identities=17% Similarity=0.220 Sum_probs=242.2
Q ss_pred CCCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCcchhhh-ccCCCCCCccccccccCCCCCeEEEecCCC--
Q 011789 5 KTQKPHAIFISYPLQGHVNPSVQLALKLASQGFTITFVNTHFIHQQM-TKASPEMGSDIFAGVRKSGLDIRYMTLSDG-- 81 (477)
Q Consensus 5 ~~~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~-- 81 (477)
+..+|||+|++.++.||++|++.|+++|+++||+|++++++...+.+ .. ++.+..++..
T Consensus 17 ~~~~MrIl~~~~~~~Gh~~~~~~la~~L~~~GheV~v~~~~~~~~~~~~~------------------g~~~~~~~~~~~ 78 (412)
T 3otg_A 17 EGRHMRVLFASLGTHGHTYPLLPLATAARAAGHEVTFATGEGFAGTLRKL------------------GFEPVATGMPVF 78 (412)
T ss_dssp -CCSCEEEEECCSSHHHHGGGHHHHHHHHHTTCEEEEEECGGGHHHHHHT------------------TCEEEECCCCHH
T ss_pred ccceeEEEEEcCCCcccHHHHHHHHHHHHHCCCEEEEEccHHHHHHHHhc------------------CCceeecCcccc
Confidence 35679999999999999999999999999999999999998776666 44 6778877741
Q ss_pred ----------CCCC-------CCCCCcHHHHHHHH-HHHhHHHHHHHHHHhHhcCCCccEEEecCCCcchHHHHHHhCCc
Q 011789 82 ----------LPLG-------FDRSLNHEQFMSSL-LHVFSAHAEEVIGQIVRSGENVHCLIADTYFVWPSKLAKKFGLY 143 (477)
Q Consensus 82 ----------~~~~-------~~~~~~~~~~~~~~-~~~~~~~~~~ll~~~~~~~~~pD~iI~D~~~~~~~~~A~~~gIP 143 (477)
.... ..........+... .......+.+++++. +||+||+|....++..+|+.+|||
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-----~pDvVv~~~~~~~~~~aa~~~giP 153 (412)
T 3otg_A 79 DGFLAALRIRFDTDSPEGLTPEQLSELPQIVFGRVIPQRVFDELQPVIERL-----RPDLVVQEISNYGAGLAALKAGIP 153 (412)
T ss_dssp HHHHHHHHHHHSCSCCTTCCHHHHTTSHHHHHHTHHHHHHHHHHHHHHHHH-----CCSEEEEETTCHHHHHHHHHHTCC
T ss_pred cchhhhhhhhhcccCCccCChhHhhHHHHHHHhccchHHHHHHHHHHHHhc-----CCCEEEECchhhHHHHHHHHcCCC
Confidence 0000 00011111222211 111223344444444 999999998777888899999999
Q ss_pred eEEEecchhHHHHHHhhhhhhhhcCCcCCCCCCCCcccccCCCCCCCCCCCccccccCCCchhHHHHHHHHhhh------
Q 011789 144 YISFWTESALVFTLYYHLDLLTINGHFQCYDCREDTIDYIPGVKAINPKDTTSYLQETDTTSACHQIIFNSFQD------ 217 (477)
Q Consensus 144 ~v~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------ 217 (477)
++.+....... ++. ...+.+++.+....
T Consensus 154 ~v~~~~~~~~~-----------------------------~~~-----------------~~~~~~~~~~~~~~~g~~~~ 187 (412)
T 3otg_A 154 TICHGVGRDTP-----------------------------DDL-----------------TRSIEEEVRGLAQRLGLDLP 187 (412)
T ss_dssp EEEECCSCCCC-----------------------------SHH-----------------HHHHHHHHHHHHHHTTCCCC
T ss_pred EEEecccccCc-----------------------------hhh-----------------hHHHHHHHHHHHHHcCCCCC
Confidence 99873321100 000 00111111111110
Q ss_pred ----ccCCcEEEEcchhhccHHHHHHHHccCC-EEEeCccCCCCCCccccccccCCccccchh-hccCCCCcEEEEEecc
Q 011789 218 ----TRNADYVLCNTVHELESEAVTALKAKIP-FITMGPISLNKFSDRVVATSLWSESDCSQW-LDKQPKGSVLYVSFGS 291 (477)
Q Consensus 218 ----~~~~~~~l~~s~~~l~~~~~~~~~~~~p-~~~vGp~~~~~~~~~~~~~~~~~~~~l~~~-l~~~~~~~~I~vs~Gs 291 (477)
....+.++..+...++.... .... ...+.+...... .+..+| ....+++++|++++||
T Consensus 188 ~~~~~~~~d~~i~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~vlv~~G~ 251 (412)
T 3otg_A 188 PGRIDGFGNPFIDIFPPSLQEPEF----RARPRRHELRPVPFAEQ------------GDLPAWLSSRDTARPLVYLTLGT 251 (412)
T ss_dssp SSCCGGGGCCEEECSCGGGSCHHH----HTCTTEEECCCCCCCCC------------CCCCGGGGGSCTTSCEEEEECTT
T ss_pred cccccCCCCeEEeeCCHHhcCCcc----cCCCCcceeeccCCCCC------------CCCCCccccccCCCCEEEEEcCC
Confidence 13445566666555554311 1111 222222211111 333445 3333466899999999
Q ss_pred cccCCHHHHHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCchhHHHhcCCCeEEEeeccHHHhhccCCCCccccccCCch
Q 011789 292 YAHVSKRDLIEIANGIAKSKVTFIWILRPDIVSSDDPNPLPEDFKKEVADRSMIITWCCQTSVLAHPAIGGFLTHCGWNS 371 (477)
Q Consensus 292 ~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~lp~~~~~~~~~nv~v~~~~p~~~lL~~~~~~~~ItHgG~gs 371 (477)
........+..+++++++.+.+++|..++... ...+. ..++|+.+.+|+|+.++|+++++ ||+|||+||
T Consensus 252 ~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~~----~~~l~-----~~~~~v~~~~~~~~~~~l~~ad~--~v~~~g~~t 320 (412)
T 3otg_A 252 SSGGTVEVLRAAIDGLAGLDADVLVASGPSLD----VSGLG-----EVPANVRLESWVPQAALLPHVDL--VVHHGGSGT 320 (412)
T ss_dssp TTCSCHHHHHHHHHHHHTSSSEEEEECCSSCC----CTTCC-----CCCTTEEEESCCCHHHHGGGCSE--EEESCCHHH
T ss_pred CCcCcHHHHHHHHHHHHcCCCEEEEEECCCCC----hhhhc-----cCCCcEEEeCCCCHHHHHhcCcE--EEECCchHH
Confidence 97556778889999999999999998876531 11121 13569999999999999999998 999999999
Q ss_pred hhHHHhcCcceeccccccchhhHHHHHHhhhcceeeecCCC-CcCHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHh
Q 011789 372 VLEGLWCGVPLLCFPLYTDQFTNRKLAVDDWNVGLNLSNEK-VITKEEVSKNVHLLMGEKSGAKYRNAAKQVKKAMEYAL 450 (477)
Q Consensus 372 ~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~G~~~~~~~-~~~~~~l~~~i~~~l~~~~~~~~~~~a~~l~~~~~~~~ 450 (477)
+.||+++|+|+|++|...||..|+..+++. |.|..+. . ++++++|.++|.++|+|+ ++++++.+.++++.+
T Consensus 321 ~~Ea~a~G~P~v~~p~~~~q~~~~~~v~~~-g~g~~~~--~~~~~~~~l~~ai~~ll~~~---~~~~~~~~~~~~~~~-- 392 (412)
T 3otg_A 321 TLGALGAGVPQLSFPWAGDSFANAQAVAQA-GAGDHLL--PDNISPDSVSGAAKRLLAEE---SYRAGARAVAAEIAA-- 392 (412)
T ss_dssp HHHHHHHTCCEEECCCSTTHHHHHHHHHHH-TSEEECC--GGGCCHHHHHHHHHHHHHCH---HHHHHHHHHHHHHHH--
T ss_pred HHHHHHhCCCEEecCCchhHHHHHHHHHHc-CCEEecC--cccCCHHHHHHHHHHHHhCH---HHHHHHHHHHHHHhc--
Confidence 999999999999999999999999999999 9999993 2 679999999999999999 999999999999886
Q ss_pred cCCCchHHHHHHHHH
Q 011789 451 QPNGSSDKNMDQFIK 465 (477)
Q Consensus 451 ~~gg~~~~~~~~~~~ 465 (477)
..+.+..++.+.+
T Consensus 393 --~~~~~~~~~~~~~ 405 (412)
T 3otg_A 393 --MPGPDEVVRLLPG 405 (412)
T ss_dssp --SCCHHHHHTTHHH
T ss_pred --CCCHHHHHHHHHH
Confidence 3444444444433
No 20
>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa}
Probab=99.97 E-value=2e-28 Score=241.90 Aligned_cols=304 Identities=15% Similarity=0.112 Sum_probs=194.2
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCcch--hhh-ccCCCCCCccccccccCCCCCeEEEecCC-CCCC
Q 011789 9 PHAIFISYPLQGHVNPSVQLALKLASQGFTITFVNTHFIH--QQM-TKASPEMGSDIFAGVRKSGLDIRYMTLSD-GLPL 84 (477)
Q Consensus 9 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~--~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~ 84 (477)
.||+|...|+.||++|.++||++|+++||+|+|+++.... +.+ .. ++++..++. ++..
T Consensus 3 ~~i~i~~GGTgGHi~palala~~L~~~g~~V~~vg~~~g~e~~~v~~~------------------g~~~~~i~~~~~~~ 64 (365)
T 3s2u_A 3 GNVLIMAGGTGGHVFPALACAREFQARGYAVHWLGTPRGIENDLVPKA------------------GLPLHLIQVSGLRG 64 (365)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHHTTCEEEEEECSSSTHHHHTGGG------------------TCCEEECC------
T ss_pred CcEEEEcCCCHHHHHHHHHHHHHHHhCCCEEEEEECCchHhhchhhhc------------------CCcEEEEECCCcCC
Confidence 5899988888899999999999999999999999977643 233 34 677777763 2211
Q ss_pred C--CCCCCcHHHHHHHHHHHhHHHHHHHHHHhHhcCCCccEEEecCCCc--chHHHHHHhCCceEEEecchhHHHHHHhh
Q 011789 85 G--FDRSLNHEQFMSSLLHVFSAHAEEVIGQIVRSGENVHCLIADTYFV--WPSKLAKKFGLYYISFWTESALVFTLYYH 160 (477)
Q Consensus 85 ~--~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~pD~iI~D~~~~--~~~~~A~~~gIP~v~~~~~~~~~~~~~~~ 160 (477)
. ......+..++..+ .+...++.+. +||+||++..+. .+..+|+.+|||+++.-
T Consensus 65 ~~~~~~~~~~~~~~~~~-----~~~~~~l~~~-----~PDvVi~~g~~~s~p~~laA~~~~iP~vihe------------ 122 (365)
T 3s2u_A 65 KGLKSLVKAPLELLKSL-----FQALRVIRQL-----RPVCVLGLGGYVTGPGGLAARLNGVPLVIHE------------ 122 (365)
T ss_dssp --------CHHHHHHHH-----HHHHHHHHHH-----CCSEEEECSSSTHHHHHHHHHHTTCCEEEEE------------
T ss_pred CCHHHHHHHHHHHHHHH-----HHHHHHHHhc-----CCCEEEEcCCcchHHHHHHHHHcCCCEEEEe------------
Confidence 1 11111122222222 1234455555 999999986555 45678999999998751
Q ss_pred hhhhhhcCCcCCCCCCCCcccccCCCCCCCCCCCccccccCCCchhHHHHHHHHhhhccCCcEEEEcchhhccHHHHHHH
Q 011789 161 LDLLTINGHFQCYDCREDTIDYIPGVKAINPKDTTSYLQETDTTSACHQIIFNSFQDTRNADYVLCNTVHELESEAVTAL 240 (477)
Q Consensus 161 ~~~~~~~~~~p~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~l~~~~~~~~ 240 (477)
.+.+|+.. .+++. +.++.++. ++++-.
T Consensus 123 -------------------~n~~~G~~--------------------nr~l~------~~a~~v~~-~~~~~~------- 149 (365)
T 3s2u_A 123 -------------------QNAVAGTA--------------------NRSLA------PIARRVCE-AFPDTF------- 149 (365)
T ss_dssp -------------------CSSSCCHH--------------------HHHHG------GGCSEEEE-SSTTSS-------
T ss_pred -------------------cchhhhhH--------------------HHhhc------cccceeee-cccccc-------
Confidence 12233221 11111 22333332 222111
Q ss_pred HccCC-EEEeCccCCCCCCccccccccCCccccchhhccCCCCcEEEEEecccccCCHHHHHHHHHHHHhC----CCeEE
Q 011789 241 KAKIP-FITMGPISLNKFSDRVVATSLWSESDCSQWLDKQPKGSVLYVSFGSYAHVSKRDLIEIANGIAKS----KVTFI 315 (477)
Q Consensus 241 ~~~~p-~~~vGp~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~I~vs~Gs~~~~~~~~~~~~~~al~~~----~~~~i 315 (477)
+... ...+|+....+..... .......++++.|+|..||.... ...+.+.++++.. +..++
T Consensus 150 -~~~~k~~~~g~pvr~~~~~~~-----------~~~~~~~~~~~~ilv~gGs~g~~--~~~~~~~~al~~l~~~~~~~vi 215 (365)
T 3s2u_A 150 -PASDKRLTTGNPVRGELFLDA-----------HARAPLTGRRVNLLVLGGSLGAE--PLNKLLPEALAQVPLEIRPAIR 215 (365)
T ss_dssp -CC---CEECCCCCCGGGCCCT-----------TSSCCCTTSCCEEEECCTTTTCS--HHHHHHHHHHHTSCTTTCCEEE
T ss_pred -cCcCcEEEECCCCchhhccch-----------hhhcccCCCCcEEEEECCcCCcc--ccchhhHHHHHhcccccceEEE
Confidence 1122 6667766543321110 01112223567899999998643 2334455666553 44566
Q ss_pred EEEcCCCCCCCCCCCCchhHHHhcCCCeEEEeeccHH-HhhccCCCCccccccCCchhhHHHhcCcceeccccc----cc
Q 011789 316 WILRPDIVSSDDPNPLPEDFKKEVADRSMIITWCCQT-SVLAHPAIGGFLTHCGWNSVLEGLWCGVPLLCFPLY----TD 390 (477)
Q Consensus 316 ~~~~~~~~~~~~~~~lp~~~~~~~~~nv~v~~~~p~~-~lL~~~~~~~~ItHgG~gs~~eal~~GvP~v~~P~~----~D 390 (477)
+.++.... +.+. ...+..+.++.+.+|+++. ++|+.+++ +|||+|.+|+.|++++|+|+|.+|+. .+
T Consensus 216 ~~~G~~~~-----~~~~-~~~~~~~~~~~v~~f~~dm~~~l~~aDl--vI~raG~~Tv~E~~a~G~P~Ilip~p~~~~~~ 287 (365)
T 3s2u_A 216 HQAGRQHA-----EITA-ERYRTVAVEADVAPFISDMAAAYAWADL--VICRAGALTVSELTAAGLPAFLVPLPHAIDDH 287 (365)
T ss_dssp EECCTTTH-----HHHH-HHHHHTTCCCEEESCCSCHHHHHHHCSE--EEECCCHHHHHHHHHHTCCEEECC-----CCH
T ss_pred EecCcccc-----cccc-ceecccccccccccchhhhhhhhccceE--EEecCCcchHHHHHHhCCCeEEeccCCCCCcH
Confidence 66654311 1111 1223456789999999987 59999998 99999999999999999999999974 58
Q ss_pred hhhHHHHHHhhhcceeeecCCC-CcCHHHHHHHHHHHhcCC
Q 011789 391 QFTNRKLAVDDWNVGLNLSNEK-VITKEEVSKNVHLLMGEK 430 (477)
Q Consensus 391 Q~~na~~v~~~~G~G~~~~~~~-~~~~~~l~~~i~~~l~~~ 430 (477)
|..||+.+++. |+|+.+. + +++++.|.++|.++|+|+
T Consensus 288 Q~~NA~~l~~~-G~a~~l~--~~~~~~~~L~~~i~~ll~d~ 325 (365)
T 3s2u_A 288 QTRNAEFLVRS-GAGRLLP--QKSTGAAELAAQLSEVLMHP 325 (365)
T ss_dssp HHHHHHHHHTT-TSEEECC--TTTCCHHHHHHHHHHHHHCT
T ss_pred HHHHHHHHHHC-CCEEEee--cCCCCHHHHHHHHHHHHCCH
Confidence 99999999999 9999994 3 889999999999999999
No 21
>2o6l_A UDP-glucuronosyltransferase 2B7; drug metabolism, rossman, MAD, enzyme, nucleotide binding, sugar,UDP-glucuronosyltransferase, UGT; 1.80A {Homo sapiens}
Probab=99.94 E-value=1.8e-26 Score=202.68 Aligned_cols=160 Identities=17% Similarity=0.392 Sum_probs=135.9
Q ss_pred cccchhhccCCCCcEEEEEecccc-cCCHHHHHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCchhHHHhcCCCeEEEee
Q 011789 270 SDCSQWLDKQPKGSVLYVSFGSYA-HVSKRDLIEIANGIAKSKVTFIWILRPDIVSSDDPNPLPEDFKKEVADRSMIITW 348 (477)
Q Consensus 270 ~~l~~~l~~~~~~~~I~vs~Gs~~-~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~lp~~~~~~~~~nv~v~~~ 348 (477)
+++.+|++..+++++|||++||.. ....+.+..+++++++.+.+++|+.++... .. +++|+++.+|
T Consensus 9 ~~~~~~l~~~~~~~~vlv~~Gs~~~~~~~~~~~~~~~al~~~~~~~~~~~g~~~~-----~~--------~~~~v~~~~~ 75 (170)
T 2o6l_A 9 KEMEDFVQSSGENGVVVFSLGSMVSNMTEERANVIASALAQIPQKVLWRFDGNKP-----DT--------LGLNTRLYKW 75 (170)
T ss_dssp HHHHHHHHTTTTTCEEEEECCSCCTTCCHHHHHHHHHHHTTSSSEEEEECCSSCC-----TT--------CCTTEEEESS
T ss_pred HHHHHHHHcCCCCCEEEEECCCCcccCCHHHHHHHHHHHHhCCCeEEEEECCcCc-----cc--------CCCcEEEecC
Confidence 788899987767789999999985 456778889999999889999999875421 12 3469999999
Q ss_pred ccHHHhhccCCCCccccccCCchhhHHHhcCcceeccccccchhhHHHHHHhhhcceeeecCCC-CcCHHHHHHHHHHHh
Q 011789 349 CCQTSVLAHPAIGGFLTHCGWNSVLEGLWCGVPLLCFPLYTDQFTNRKLAVDDWNVGLNLSNEK-VITKEEVSKNVHLLM 427 (477)
Q Consensus 349 ~p~~~lL~~~~~~~~ItHgG~gs~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~G~~~~~~~-~~~~~~l~~~i~~~l 427 (477)
+||.++|.|+.+.+||||||+||++||+++|+|+|++|...||+.||.++++. |+|+.+. . +++.++|.++|.+++
T Consensus 76 ~~~~~~l~~~~ad~~I~~~G~~t~~Ea~~~G~P~i~~p~~~~Q~~na~~l~~~-g~g~~~~--~~~~~~~~l~~~i~~ll 152 (170)
T 2o6l_A 76 IPQNDLLGHPKTRAFITHGGANGIYEAIYHGIPMVGIPLFADQPDNIAHMKAR-GAAVRVD--FNTMSSTDLLNALKRVI 152 (170)
T ss_dssp CCHHHHHTSTTEEEEEECCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHTT-TSEEECC--TTTCCHHHHHHHHHHHH
T ss_pred CCHHHHhcCCCcCEEEEcCCccHHHHHHHcCCCEEeccchhhHHHHHHHHHHc-CCeEEec--cccCCHHHHHHHHHHHH
Confidence 99999995555555999999999999999999999999999999999999999 9999994 2 789999999999999
Q ss_pred cCCchHHHHHHHHHHHHHHHH
Q 011789 428 GEKSGAKYRNAAKQVKKAMEY 448 (477)
Q Consensus 428 ~~~~~~~~~~~a~~l~~~~~~ 448 (477)
+|+ +|+++++++++++++
T Consensus 153 ~~~---~~~~~a~~~~~~~~~ 170 (170)
T 2o6l_A 153 NDP---SYKENVMKLSRIQHD 170 (170)
T ss_dssp HCH---HHHHHHHHHC-----
T ss_pred cCH---HHHHHHHHHHHHhhC
Confidence 999 999999999998863
No 22
>1f0k_A MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol...; rossmann fold, transferase; 1.90A {Escherichia coli} SCOP: c.87.1.2 PDB: 1nlm_A*
Probab=99.86 E-value=6.1e-20 Score=180.91 Aligned_cols=311 Identities=14% Similarity=0.106 Sum_probs=192.2
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCcch--hhh-ccCCCCCCccccccccCCCCCeEEEecCCCCCCC
Q 011789 9 PHAIFISYPLQGHVNPSVQLALKLASQGFTITFVNTHFIH--QQM-TKASPEMGSDIFAGVRKSGLDIRYMTLSDGLPLG 85 (477)
Q Consensus 9 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~--~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 85 (477)
|||+|++.+..||..+.+.|+++|.++||+|++++..... ..+ .. ++++..++......
T Consensus 7 mkIl~~~~~~gG~~~~~~~la~~L~~~G~~V~v~~~~~~~~~~~~~~~------------------g~~~~~~~~~~~~~ 68 (364)
T 1f0k_A 7 KRLMVMAGGTGGHVFPGLAVAHHLMAQGWQVRWLGTADRMEADLVPKH------------------GIEIDFIRISGLRG 68 (364)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHTTTCEEEEEECTTSTHHHHGGGG------------------TCEEEECCCCCCTT
T ss_pred cEEEEEeCCCccchhHHHHHHHHHHHcCCEEEEEecCCcchhhhcccc------------------CCceEEecCCccCc
Confidence 8999999888899999999999999999999999976542 222 22 56676665321100
Q ss_pred CCCCCcHHHHHHHHHH--HhHHHHHHHHHHhHhcCCCccEEEecCCCc--chHHHHHHhCCceEEEecchhHHHHHHhhh
Q 011789 86 FDRSLNHEQFMSSLLH--VFSAHAEEVIGQIVRSGENVHCLIADTYFV--WPSKLAKKFGLYYISFWTESALVFTLYYHL 161 (477)
Q Consensus 86 ~~~~~~~~~~~~~~~~--~~~~~~~~ll~~~~~~~~~pD~iI~D~~~~--~~~~~A~~~gIP~v~~~~~~~~~~~~~~~~ 161 (477)
......+..... .....+..++++. +||+|+++.... .+..+++.+|+|++.....
T Consensus 69 ----~~~~~~~~~~~~~~~~~~~l~~~l~~~-----~pDvv~~~~~~~~~~~~~~~~~~~~p~v~~~~~----------- 128 (364)
T 1f0k_A 69 ----KGIKALIAAPLRIFNAWRQARAIMKAY-----KPDVVLGMGGYVSGPGGLAAWSLGIPVVLHEQN----------- 128 (364)
T ss_dssp ----CCHHHHHTCHHHHHHHHHHHHHHHHHH-----CCSEEEECSSTTHHHHHHHHHHTTCCEEEEECS-----------
T ss_pred ----CccHHHHHHHHHHHHHHHHHHHHHHhc-----CCCEEEEeCCcCchHHHHHHHHcCCCEEEEecC-----------
Confidence 111111111100 0112233444443 999999986442 4566788999999865211
Q ss_pred hhhhhcCCcCCCCCCCCcccccCCCCCCCCCCCccccccCCCchhHHHHHHHHhhhccCCcEEEEcchhhccHHHHHHHH
Q 011789 162 DLLTINGHFQCYDCREDTIDYIPGVKAINPKDTTSYLQETDTTSACHQIIFNSFQDTRNADYVLCNTVHELESEAVTALK 241 (477)
Q Consensus 162 ~~~~~~~~~p~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~l~~~~~~~~~ 241 (477)
..++ ...+++ .+.++.+++.+...
T Consensus 129 --------------------~~~~--------------------~~~~~~------~~~~d~v~~~~~~~---------- 152 (364)
T 1f0k_A 129 --------------------GIAG--------------------LTNKWL------AKIATKVMQAFPGA---------- 152 (364)
T ss_dssp --------------------SSCC--------------------HHHHHH------TTTCSEEEESSTTS----------
T ss_pred --------------------CCCc--------------------HHHHHH------HHhCCEEEecChhh----------
Confidence 0010 001111 13455556544221
Q ss_pred ccCC-EEEeCccCCCCCCccccccccCCccccchhhccCCCCcEEEEEecccccCCHHHHHHHHHHHHhC--CCeEEEEE
Q 011789 242 AKIP-FITMGPISLNKFSDRVVATSLWSESDCSQWLDKQPKGSVLYVSFGSYAHVSKRDLIEIANGIAKS--KVTFIWIL 318 (477)
Q Consensus 242 ~~~p-~~~vGp~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~I~vs~Gs~~~~~~~~~~~~~~al~~~--~~~~i~~~ 318 (477)
.| +..+|........ .+ ....+.+...+++++|++..|+... .+....++++++.. +.++++.+
T Consensus 153 --~~~~~~i~n~v~~~~~-~~--------~~~~~~~~~~~~~~~il~~~g~~~~--~k~~~~li~a~~~l~~~~~~l~i~ 219 (364)
T 1f0k_A 153 --FPNAEVVGNPVRTDVL-AL--------PLPQQRLAGREGPVRVLVVGGSQGA--RILNQTMPQVAAKLGDSVTIWHQS 219 (364)
T ss_dssp --SSSCEECCCCCCHHHH-TS--------CCHHHHHTTCCSSEEEEEECTTTCC--HHHHHHHHHHHHHHGGGEEEEEEC
T ss_pred --cCCceEeCCccchhhc-cc--------chhhhhcccCCCCcEEEEEcCchHh--HHHHHHHHHHHHHhcCCcEEEEEc
Confidence 22 4455543221100 00 0001112222344578888888753 44445555666554 45556666
Q ss_pred cCCCCCCCCCCCCchhHHH---hcC-CCeEEEeeccH-HHhhccCCCCccccccCCchhhHHHhcCcceeccccc---cc
Q 011789 319 RPDIVSSDDPNPLPEDFKK---EVA-DRSMIITWCCQ-TSVLAHPAIGGFLTHCGWNSVLEGLWCGVPLLCFPLY---TD 390 (477)
Q Consensus 319 ~~~~~~~~~~~~lp~~~~~---~~~-~nv~v~~~~p~-~~lL~~~~~~~~ItHgG~gs~~eal~~GvP~v~~P~~---~D 390 (477)
+... .+.+++ +.. +||.+.+|+++ ..+|..+++ +|+++|.+++.||+++|+|+|+.|.. .|
T Consensus 220 G~~~---------~~~l~~~~~~~~~~~v~~~g~~~~~~~~~~~ad~--~v~~sg~~~~~EAma~G~Pvi~~~~~g~~~~ 288 (364)
T 1f0k_A 220 GKGS---------QQSVEQAYAEAGQPQHKVTEFIDDMAAAYAWADV--VVCRSGALTVSEIAAAGLPALFVPFQHKDRQ 288 (364)
T ss_dssp CTTC---------HHHHHHHHHHTTCTTSEEESCCSCHHHHHHHCSE--EEECCCHHHHHHHHHHTCCEEECCCCCTTCH
T ss_pred CCch---------HHHHHHHHhhcCCCceEEecchhhHHHHHHhCCE--EEECCchHHHHHHHHhCCCEEEeeCCCCchh
Confidence 6441 133322 222 58999999954 569999998 99999988999999999999999987 79
Q ss_pred hhhHHHHHHhhhcceeeecCCC-CcCHHHHHHHHHHHhcCCchHHHHHHHHHHHHH
Q 011789 391 QFTNRKLAVDDWNVGLNLSNEK-VITKEEVSKNVHLLMGEKSGAKYRNAAKQVKKA 445 (477)
Q Consensus 391 Q~~na~~v~~~~G~G~~~~~~~-~~~~~~l~~~i~~~l~~~~~~~~~~~a~~l~~~ 445 (477)
|..|+..+.+. |.|..+. . +++.++|.++|.++ |+ +.+++..+-+++
T Consensus 289 q~~~~~~~~~~-g~g~~~~--~~d~~~~~la~~i~~l--~~---~~~~~~~~~~~~ 336 (364)
T 1f0k_A 289 QYWNALPLEKA-GAAKIIE--QPQLSVDAVANTLAGW--SR---ETLLTMAERARA 336 (364)
T ss_dssp HHHHHHHHHHT-TSEEECC--GGGCCHHHHHHHHHTC--CH---HHHHHHHHHHHH
T ss_pred HHHHHHHHHhC-CcEEEec--cccCCHHHHHHHHHhc--CH---HHHHHHHHHHHH
Confidence 99999999999 9999983 2 56799999999988 77 565555444443
No 23
>3hbm_A UDP-sugar hydrolase; PSEG; 1.80A {Campylobacter jejuni subsp} PDB: 3hbn_A*
Probab=99.67 E-value=3.4e-15 Score=140.20 Aligned_cols=114 Identities=11% Similarity=0.101 Sum_probs=88.5
Q ss_pred CCcEEEEEecccccCCHHHHHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCchhHHHhc--CCCeEEEeeccHH-Hhhcc
Q 011789 281 KGSVLYVSFGSYAHVSKRDLIEIANGIAKSKVTFIWILRPDIVSSDDPNPLPEDFKKEV--ADRSMIITWCCQT-SVLAH 357 (477)
Q Consensus 281 ~~~~I~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~lp~~~~~~~--~~nv~v~~~~p~~-~lL~~ 357 (477)
+.+.|+|++|.... ......+++++.... ++.++++.+. ...+.+++.. ..|+.+..|+++. +++..
T Consensus 156 ~~~~ILv~~GG~d~--~~l~~~vl~~L~~~~-~i~vv~G~~~-------~~~~~l~~~~~~~~~v~v~~~~~~m~~~m~~ 225 (282)
T 3hbm_A 156 KKYDFFICMGGTDI--KNLSLQIASELPKTK-IISIATSSSN-------PNLKKLQKFAKLHNNIRLFIDHENIAKLMNE 225 (282)
T ss_dssp CCEEEEEECCSCCT--TCHHHHHHHHSCTTS-CEEEEECTTC-------TTHHHHHHHHHTCSSEEEEESCSCHHHHHHT
T ss_pred cCCeEEEEECCCch--hhHHHHHHHHhhcCC-CEEEEECCCc-------hHHHHHHHHHhhCCCEEEEeCHHHHHHHHHH
Confidence 34689999997642 235566777776654 5666666551 2223333221 2489999999888 49999
Q ss_pred CCCCccccccCCchhhHHHhcCcceeccccccchhhHHHHHHhhhcceeee
Q 011789 358 PAIGGFLTHCGWNSVLEGLWCGVPLLCFPLYTDQFTNRKLAVDDWNVGLNL 408 (477)
Q Consensus 358 ~~~~~~ItHgG~gs~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~G~~~ 408 (477)
+++ +|++|| +|+.|+++.|+|+|++|...+|..||+.+++. |+++.+
T Consensus 226 aDl--vI~~gG-~T~~E~~~~g~P~i~ip~~~~Q~~nA~~l~~~-G~~~~~ 272 (282)
T 3hbm_A 226 SNK--LIISAS-SLVNEALLLKANFKAICYVKNQESTATWLAKK-GYEVEY 272 (282)
T ss_dssp EEE--EEEESS-HHHHHHHHTTCCEEEECCSGGGHHHHHHHHHT-TCEEEC
T ss_pred CCE--EEECCc-HHHHHHHHcCCCEEEEeCCCCHHHHHHHHHHC-CCEEEc
Confidence 998 999999 89999999999999999999999999999999 999988
No 24
>2jzc_A UDP-N-acetylglucosamine transferase subunit ALG13; rossmann-like fold, endoplasmic reticulum, glycosyltransferase, structural genomics; NMR {Saccharomyces cerevisiae} PDB: 2ks6_A
Probab=99.59 E-value=1.7e-15 Score=136.57 Aligned_cols=131 Identities=15% Similarity=0.146 Sum_probs=95.1
Q ss_pred CCCcEEEEEecccccCCHHHHHH-----HHHHHHhCC-CeEEEEEcCCCCCCCCCCCCchhHHHhc---------C----
Q 011789 280 PKGSVLYVSFGSYAHVSKRDLIE-----IANGIAKSK-VTFIWILRPDIVSSDDPNPLPEDFKKEV---------A---- 340 (477)
Q Consensus 280 ~~~~~I~vs~Gs~~~~~~~~~~~-----~~~al~~~~-~~~i~~~~~~~~~~~~~~~lp~~~~~~~---------~---- 340 (477)
+++++|||+.||.... .+.+.. ++.++...+ .+++++++.... . ..+...+.. |
T Consensus 26 ~~~~~VlVtgGS~~~~-n~li~~vl~~~~l~~L~~~~~~~vv~q~G~~~~-----~-~~~~~~~~~~~~~~~~l~p~~~~ 98 (224)
T 2jzc_A 26 IEEKALFVTCGATVPF-PKLVSCVLSDEFCQELIQYGFVRLIIQFGRNYS-----S-EFEHLVQERGGQRESQKIPIDQF 98 (224)
T ss_dssp CCSCCEEEECCSCCSC-HHHHHHHTSHHHHHHHHTTTCCCEEECCCSSSC-----C-CCCSHHHHHTCEECSCCCSSCTT
T ss_pred CCCCEEEEEcCCchHH-HHHHHHHHHHHHHHHHhcCCCeEEEEEECCCch-----h-hHHHHHHhhhccccccccccccc
Confidence 4567999999997422 333333 348888877 789999886632 0 111111111 1
Q ss_pred -------------C--CeEEEeeccHH-Hhhc-cCCCCccccccCCchhhHHHhcCcceeccccc----cchhhHHHHHH
Q 011789 341 -------------D--RSMIITWCCQT-SVLA-HPAIGGFLTHCGWNSVLEGLWCGVPLLCFPLY----TDQFTNRKLAV 399 (477)
Q Consensus 341 -------------~--nv~v~~~~p~~-~lL~-~~~~~~~ItHgG~gs~~eal~~GvP~v~~P~~----~DQ~~na~~v~ 399 (477)
. ++.+.+|+++. ++|+ .+++ +|||||+||++|++++|+|+|++|.. .||..||++++
T Consensus 99 ~~~~~~~~~~~~~~~~~v~v~~f~~~m~~~l~~~Adl--vIshaGagTv~Eal~~G~P~IvVP~~~~~~~HQ~~nA~~l~ 176 (224)
T 2jzc_A 99 GCGDTARQYVLMNGKLKVIGFDFSTKMQSIIRDYSDL--VISHAGTGSILDSLRLNKPLIVCVNDSLMDNHQQQIADKFV 176 (224)
T ss_dssp CTTCSCEEEESTTTSSEEEECCSSSSHHHHHHHHCSC--EEESSCHHHHHHHHHTTCCCCEECCSSCCCCHHHHHHHHHH
T ss_pred cccccccccccccCCceEEEeeccchHHHHHHhcCCE--EEECCcHHHHHHHHHhCCCEEEEcCcccccchHHHHHHHHH
Confidence 1 34566788877 6999 9998 99999999999999999999999984 46999999999
Q ss_pred hhhcceeeecCCCCcCHHHHHHHHHHH
Q 011789 400 DDWNVGLNLSNEKVITKEEVSKNVHLL 426 (477)
Q Consensus 400 ~~~G~G~~~~~~~~~~~~~l~~~i~~~ 426 (477)
+. |.|+.+ +.++|.++|.++
T Consensus 177 ~~-G~~~~~------~~~~L~~~i~~l 196 (224)
T 2jzc_A 177 EL-GYVWSC------APTETGLIAGLR 196 (224)
T ss_dssp HH-SCCCEE------CSCTTTHHHHHH
T ss_pred HC-CCEEEc------CHHHHHHHHHHH
Confidence 99 998766 345566666665
No 25
>3c48_A Predicted glycosyltransferases; retaining glycosyltransferase, beta alpha beta, substrate AS catalysis; 2.10A {Corynebacterium glutamicum} PDB: 3c4v_A* 3c4q_A*
Probab=99.44 E-value=6.5e-11 Score=119.11 Aligned_cols=358 Identities=14% Similarity=0.092 Sum_probs=181.1
Q ss_pred CCCcEEEEEcC-----------CCccCHHHHHHHHHHHHhCCCeEEEEeCCcchhhhccCCCCCCccccccccCCCCCeE
Q 011789 6 TQKPHAIFISY-----------PLQGHVNPSVQLALKLASQGFTITFVNTHFIHQQMTKASPEMGSDIFAGVRKSGLDIR 74 (477)
Q Consensus 6 ~~~~~il~~~~-----------~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 74 (477)
..||||+|++. ...|+-.....|+++|.++||+|++++.......-... ...++++
T Consensus 18 ~~mmkIl~i~~~~~p~~~~~~~~~GG~~~~~~~la~~L~~~G~~V~v~~~~~~~~~~~~~-------------~~~~~v~ 84 (438)
T 3c48_A 18 GSHMRVAMISMHTSPLQQPGTGDSGGMNVYILSTATELAKQGIEVDIYTRATRPSQGEIV-------------RVAENLR 84 (438)
T ss_dssp -CCCEEEEECTTSCTTCC-------CHHHHHHHHHHHHHHTTCEEEEEEECCCGGGCSEE-------------EEETTEE
T ss_pred cchheeeeEEeeccccccCCCCCCCCHHHHHHHHHHHHHhcCCEEEEEecCCCCCCcccc-------------cccCCeE
Confidence 58999999995 23688889999999999999999999876542211000 0011677
Q ss_pred EEecCCCCCCCCCCCCcHHHHHHHHHHHhHHHHHHHHHH-hHhcCCCccEEEecCCCc--chHHHHHHhCCceEEEecch
Q 011789 75 YMTLSDGLPLGFDRSLNHEQFMSSLLHVFSAHAEEVIGQ-IVRSGENVHCLIADTYFV--WPSKLAKKFGLYYISFWTES 151 (477)
Q Consensus 75 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~-~~~~~~~pD~iI~D~~~~--~~~~~A~~~gIP~v~~~~~~ 151 (477)
+..++....... ........+..+ ...++.. +... .+||+|++..... .+..+++.+|+|+|......
T Consensus 85 v~~~~~~~~~~~-~~~~~~~~~~~~-------~~~~~~~~~~~~-~~~Div~~~~~~~~~~~~~~~~~~~~p~v~~~h~~ 155 (438)
T 3c48_A 85 VINIAAGPYEGL-SKEELPTQLAAF-------TGGMLSFTRREK-VTYDLIHSHYWLSGQVGWLLRDLWRIPLIHTAHTL 155 (438)
T ss_dssp EEEECCSCSSSC-CGGGGGGGHHHH-------HHHHHHHHHHHT-CCCSEEEEEHHHHHHHHHHHHHHHTCCEEEECSSC
T ss_pred EEEecCCCcccc-chhHHHHHHHHH-------HHHHHHHHHhcc-CCCCEEEeCCccHHHHHHHHHHHcCCCEEEEecCC
Confidence 777764211110 111111111111 1112222 2221 2599999875322 34456788999998764332
Q ss_pred hHHHHHHhhhhhhhhcCCcCCCCCCCCcccccCCCCCCCCCCCccccccCCCchhHHHHHHHHhhhccCCcEEEEcchhh
Q 011789 152 ALVFTLYYHLDLLTINGHFQCYDCREDTIDYIPGVKAINPKDTTSYLQETDTTSACHQIIFNSFQDTRNADYVLCNTVHE 231 (477)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~ 231 (477)
.... .... ...... .......+. ......++.+++.+...
T Consensus 156 ~~~~---------------------------~~~~---~~~~~~--------~~~~~~~~~--~~~~~~~d~ii~~s~~~ 195 (438)
T 3c48_A 156 AAVK---------------------------NSYR---DDSDTP--------ESEARRICE--QQLVDNADVLAVNTQEE 195 (438)
T ss_dssp HHHH---------------------------SCC-------CCH--------HHHHHHHHH--HHHHHHCSEEEESSHHH
T ss_pred cccc---------------------------cccc---cccCCc--------chHHHHHHH--HHHHhcCCEEEEcCHHH
Confidence 1100 0000 000000 000011111 12235678888888664
Q ss_pred ccHHHHHHHHccCC--EEEeCccCCCCCCccccccccCCccccchhhccCCCCcEEEEEecccccC-CHHHHHHHHHHHH
Q 011789 232 LESEAVTALKAKIP--FITMGPISLNKFSDRVVATSLWSESDCSQWLDKQPKGSVLYVSFGSYAHV-SKRDLIEIANGIA 308 (477)
Q Consensus 232 l~~~~~~~~~~~~p--~~~vGp~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~I~vs~Gs~~~~-~~~~~~~~~~al~ 308 (477)
.+.- ... ....+ +..+........- .+.. . .....+.+-+.-. ++..+++..|+.... ....+-..+..+.
T Consensus 196 ~~~~-~~~-~g~~~~k~~vi~ngvd~~~~-~~~~-~-~~~~~~r~~~~~~-~~~~~i~~~G~~~~~Kg~~~li~a~~~l~ 269 (438)
T 3c48_A 196 MQDL-MHH-YDADPDRISVVSPGADVELY-SPGN-D-RATERSRRELGIP-LHTKVVAFVGRLQPFKGPQVLIKAVAALF 269 (438)
T ss_dssp HHHH-HHH-HCCCGGGEEECCCCCCTTTS-CCC------CHHHHHHTTCC-SSSEEEEEESCBSGGGCHHHHHHHHHHHH
T ss_pred HHHH-HHH-hCCChhheEEecCCcccccc-CCcc-c-chhhhhHHhcCCC-CCCcEEEEEeeecccCCHHHHHHHHHHHH
Confidence 4422 110 11122 4444433322110 0000 0 0000122222221 234677778887532 2222222223332
Q ss_pred h-C---CCeEEEEEcCCCCCCCCCCCCchhHH---Hh--cCCCeEEEeeccHH---HhhccCCCCccccc----cCCchh
Q 011789 309 K-S---KVTFIWILRPDIVSSDDPNPLPEDFK---KE--VADRSMIITWCCQT---SVLAHPAIGGFLTH----CGWNSV 372 (477)
Q Consensus 309 ~-~---~~~~i~~~~~~~~~~~~~~~lp~~~~---~~--~~~nv~v~~~~p~~---~lL~~~~~~~~ItH----gG~gs~ 372 (477)
. . +.+ ++.++.... .+...+.++ ++ +.++|.+.+++|+. .+|..+++ +|.- |.-+++
T Consensus 270 ~~~p~~~~~-l~i~G~~~~----~g~~~~~l~~~~~~~~l~~~v~~~g~~~~~~~~~~~~~adv--~v~ps~~e~~~~~~ 342 (438)
T 3c48_A 270 DRDPDRNLR-VIICGGPSG----PNATPDTYRHMAEELGVEKRIRFLDPRPPSELVAVYRAADI--VAVPSFNESFGLVA 342 (438)
T ss_dssp HHCTTCSEE-EEEECCBC----------CHHHHHHHHTTCTTTEEEECCCCHHHHHHHHHHCSE--EEECCSCCSSCHHH
T ss_pred hhCCCcceE-EEEEeCCCC----CCcHHHHHHHHHHHcCCCCcEEEcCCCChHHHHHHHHhCCE--EEECccccCCchHH
Confidence 2 2 233 334443100 011112222 22 34789999999875 48899998 5543 334589
Q ss_pred hHHHhcCcceeccccccchhhHHHHHHhhhcceeeecCCCCcCHHHHHHHHHHHhcCCch-HHHHHHHHHHHHHH
Q 011789 373 LEGLWCGVPLLCFPLYTDQFTNRKLAVDDWNVGLNLSNEKVITKEEVSKNVHLLMGEKSG-AKYRNAAKQVKKAM 446 (477)
Q Consensus 373 ~eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~G~~~~~~~~~~~~~l~~~i~~~l~~~~~-~~~~~~a~~l~~~~ 446 (477)
.||+++|+|+|+.+ .......+++. +.|..+ +.-+.+++.++|.++++|++. +.+.+++++..+.+
T Consensus 343 ~Eama~G~PvI~~~----~~~~~e~i~~~-~~g~~~---~~~d~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~ 409 (438)
T 3c48_A 343 MEAQASGTPVIAAR----VGGLPIAVAEG-ETGLLV---DGHSPHAWADALATLLDDDETRIRMGEDAVEHARTF 409 (438)
T ss_dssp HHHHHTTCCEEEES----CTTHHHHSCBT-TTEEEE---SSCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHcCCCEEecC----CCChhHHhhCC-CcEEEC---CCCCHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHhC
Confidence 99999999999865 45566677777 789888 445899999999999998732 34555555555543
No 26
>1v4v_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, two domains, homodimer, riken structural genomics/proteomics initiative, RSGI; HET: MSE; 1.80A {Thermus thermophilus} SCOP: c.87.1.3
Probab=99.42 E-value=1.5e-12 Score=128.44 Aligned_cols=134 Identities=14% Similarity=0.175 Sum_probs=86.6
Q ss_pred CCcEEEEEecccccCCHHHHHHHHHHHHh-----CCCeEEEEEcCCCCCCCCCCCCchhHHHhc--CCCeEEEeeccH--
Q 011789 281 KGSVLYVSFGSYAHVSKRDLIEIANGIAK-----SKVTFIWILRPDIVSSDDPNPLPEDFKKEV--ADRSMIITWCCQ-- 351 (477)
Q Consensus 281 ~~~~I~vs~Gs~~~~~~~~~~~~~~al~~-----~~~~~i~~~~~~~~~~~~~~~lp~~~~~~~--~~nv~v~~~~p~-- 351 (477)
++++|+++.|...... ....++++++. .+..+++..+.+. .+-+.+++.. .++|.+.+++++
T Consensus 197 ~~~~vl~~~gr~~~~k--~~~~ll~a~~~l~~~~~~~~lv~~~g~~~-------~~~~~l~~~~~~~~~v~~~g~~g~~~ 267 (376)
T 1v4v_A 197 EGPYVTVTMHRRENWP--LLSDLAQALKRVAEAFPHLTFVYPVHLNP-------VVREAVFPVLKGVRNFVLLDPLEYGS 267 (376)
T ss_dssp SSCEEEECCCCGGGGG--GHHHHHHHHHHHHHHCTTSEEEEECCSCH-------HHHHHHHHHHTTCTTEEEECCCCHHH
T ss_pred CCCEEEEEeCcccchH--HHHHHHHHHHHHHhhCCCeEEEEECCCCH-------HHHHHHHHHhccCCCEEEECCCCHHH
Confidence 3457888888654322 23445555433 2455554444320 0112222221 358999865554
Q ss_pred -HHhhccCCCCccccccCCchhhHHHhcCcceeccccccchhhHHHHHHhhhcceeeecCCCCcCHHHHHHHHHHHhcCC
Q 011789 352 -TSVLAHPAIGGFLTHCGWNSVLEGLWCGVPLLCFPLYTDQFTNRKLAVDDWNVGLNLSNEKVITKEEVSKNVHLLMGEK 430 (477)
Q Consensus 352 -~~lL~~~~~~~~ItHgG~gs~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~G~~~~~~~~~~~~~l~~~i~~~l~~~ 430 (477)
..+|+.+++ ||+.+| |.+.||+++|+|+|+.+...++.. +.+. |.|+.+ . .+.++|.+++.++++|+
T Consensus 268 ~~~~~~~ad~--~v~~S~-g~~lEA~a~G~PvI~~~~~~~~~~----~~~~-g~g~lv---~-~d~~~la~~i~~ll~d~ 335 (376)
T 1v4v_A 268 MAALMRASLL--LVTDSG-GLQEEGAALGVPVVVLRNVTERPE----GLKA-GILKLA---G-TDPEGVYRVVKGLLENP 335 (376)
T ss_dssp HHHHHHTEEE--EEESCH-HHHHHHHHTTCCEEECSSSCSCHH----HHHH-TSEEEC---C-SCHHHHHHHHHHHHTCH
T ss_pred HHHHHHhCcE--EEECCc-CHHHHHHHcCCCEEeccCCCcchh----hhcC-CceEEC---C-CCHHHHHHHHHHHHhCh
Confidence 479999998 888873 445699999999999886666655 3567 888877 3 48999999999999987
Q ss_pred chHHHHHH
Q 011789 431 SGAKYRNA 438 (477)
Q Consensus 431 ~~~~~~~~ 438 (477)
+.+++
T Consensus 336 ---~~~~~ 340 (376)
T 1v4v_A 336 ---EELSR 340 (376)
T ss_dssp ---HHHHH
T ss_pred ---Hhhhh
Confidence 54443
No 27
>3fro_A GLGA glycogen synthase; glycosyltransferase family, UDP/ADP-glucose-glycogen synthas rossman folds, transferase; HET: NHF; 2.50A {Pyrococcus abyssi} SCOP: c.87.1.8 PDB: 2bis_A* 3l01_A*
Probab=99.40 E-value=4.3e-10 Score=112.83 Aligned_cols=401 Identities=11% Similarity=0.080 Sum_probs=192.0
Q ss_pred CcEEEEEcCC-----CccCHHHHHHHHHHHHhCCCeEEEEeCCcchhhhccCCCCC-C-ccccccc-cCCCCCeEEEecC
Q 011789 8 KPHAIFISYP-----LQGHVNPSVQLALKLASQGFTITFVNTHFIHQQMTKASPEM-G-SDIFAGV-RKSGLDIRYMTLS 79 (477)
Q Consensus 8 ~~~il~~~~~-----~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~~~~g~~~~-~-~~~~~~~-~~~~~~~~~~~l~ 79 (477)
+|||++++.. ..|--.-+..|+++|+++||+|+++++......-....... . ....... ....+++.+..++
T Consensus 2 ~MkIl~v~~~~~p~~~gG~~~~~~~la~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~v~~~~ 81 (439)
T 3fro_A 2 HMKVLLLGFEFLPVKVGGLAEALTAISEALASLGHEVLVFTPSHGRFQGEEIGKIRVFGEEVQVKVSYEERGNLRIYRIG 81 (439)
T ss_dssp CCEEEEECSCCTTSCSSSHHHHHHHHHHHHHHTTCEEEEEEECTTCSCCEEEEEEEETTEEEEEEEEEEEETTEEEEEEE
T ss_pred ceEEEEEecccCCcccCCHHHHHHHHHHHHHHCCCeEEEEecCCCCchhhhhccccccCcccceeeeeccCCCceEEEec
Confidence 6899999843 34555568899999999999999999543322100000000 0 0000000 0011267777766
Q ss_pred CCCCCCCCCCC-cHHHHHHHHHHHhHHHHHHHHHHhHhcCCCccEEEecCCCc--chHHHHHHhCCceEEEecchhHHHH
Q 011789 80 DGLPLGFDRSL-NHEQFMSSLLHVFSAHAEEVIGQIVRSGENVHCLIADTYFV--WPSKLAKKFGLYYISFWTESALVFT 156 (477)
Q Consensus 80 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~pD~iI~D~~~~--~~~~~A~~~gIP~v~~~~~~~~~~~ 156 (477)
...-....... ....+...+ ......+..++..+.....+||+|.+..... .+..+++..|+|+|.........
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~Dii~~~~~~~~~~~~~~~~~~~~~~v~~~h~~~~~-- 158 (439)
T 3fro_A 82 GGLLDSEDVYGPGWDGLIRKA-VTFGRASVLLLNDLLREEPLPDVVHFHDWHTVFAGALIKKYFKIPAVFTIHRLNKS-- 158 (439)
T ss_dssp SGGGGCSSTTCSHHHHHHHHH-HHHHHHHHHHHHHHTTTSCCCSEEEEESGGGHHHHHHHHHHHCCCEEEEESCCCCC--
T ss_pred chhccccccccCCcchhhhhh-HHHHHHHHHHHHHHhccCCCCeEEEecchhhhhhHHHHhhccCCCEEEEecccccc--
Confidence 41111111111 111112222 1122233344444421124999999886443 24566788999998874321100
Q ss_pred HHhhhhhhhhcCCcCCCCCCCCcccccCCCCCCCCCCCccccccCCCchhHHHHHHHHhhhccCCcEEEEcchhhccHHH
Q 011789 157 LYYHLDLLTINGHFQCYDCREDTIDYIPGVKAINPKDTTSYLQETDTTSACHQIIFNSFQDTRNADYVLCNTVHELESEA 236 (477)
Q Consensus 157 ~~~~~~~~~~~~~~p~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~l~~~~ 236 (477)
..+ ..... ......... .....+.+.. ...++.+++.|....+..
T Consensus 159 ------------~~~--------~~~~~---~~~~~~~~~-----~~~~~~~~~~------~~~ad~ii~~S~~~~~~~- 203 (439)
T 3fro_A 159 ------------KLP--------AFYFH---EAGLSELAP-----YPDIDPEHTG------GYIADIVTTVSRGYLIDE- 203 (439)
T ss_dssp ------------CEE--------HHHHH---HTTCGGGCC-----SSEECHHHHH------HHHCSEEEESCHHHHHHT-
T ss_pred ------------cCc--------hHHhC---ccccccccc-----cceeeHhhhh------hhhccEEEecCHHHHHHH-
Confidence 000 00000 000000000 0000111222 246778888776544431
Q ss_pred HHHHH-ccCCEEEeCccCCCCC-CccccccccCCc-cccchhhccCCCCcEEEEEecccc-cC-CHHHHHHHHHHHHhC-
Q 011789 237 VTALK-AKIPFITMGPISLNKF-SDRVVATSLWSE-SDCSQWLDKQPKGSVLYVSFGSYA-HV-SKRDLIEIANGIAKS- 310 (477)
Q Consensus 237 ~~~~~-~~~p~~~vGp~~~~~~-~~~~~~~~~~~~-~~l~~~l~~~~~~~~I~vs~Gs~~-~~-~~~~~~~~~~al~~~- 310 (477)
..... +..++..+..-..... .....+...... .++.+-+.-. ++ .+++..|+.. .. ....+-..+..+...
T Consensus 204 ~~~~~~~~~~i~vi~ngvd~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~i~~~G~~~~~~Kg~~~li~a~~~l~~~~ 281 (439)
T 3fro_A 204 WGFFRNFEGKITYVFNGIDCSFWNESYLTGSRDERKKSLLSKFGMD-EG-VTFMFIGRFDRGQKGVDVLLKAIEILSSKK 281 (439)
T ss_dssp HHHHGGGTTSEEECCCCCCTTTSCGGGSCSCHHHHHHHHHHHHTCC-SC-EEEEEECCSSCTTBCHHHHHHHHHHHHTSG
T ss_pred hhhhhhcCCceeecCCCCCchhcCcccccchhhhhHHHHHHHcCCC-CC-cEEEEEcccccccccHHHHHHHHHHHHhcc
Confidence 11111 1112333333221111 000000000000 2222223322 33 7788888876 32 233333344444442
Q ss_pred ---CCeEEEEEcCCCCCCCCCCCCch---hHHHhcCCCeEEEeeccHHH---hhccCCCCccccc----cCCchhhHHHh
Q 011789 311 ---KVTFIWILRPDIVSSDDPNPLPE---DFKKEVADRSMIITWCCQTS---VLAHPAIGGFLTH----CGWNSVLEGLW 377 (477)
Q Consensus 311 ---~~~~i~~~~~~~~~~~~~~~lp~---~~~~~~~~nv~v~~~~p~~~---lL~~~~~~~~ItH----gG~gs~~eal~ 377 (477)
+.++ +.+|.+.. ...+ ...++.++++.+.+|+|+.+ ++..+++ +|.- |--+++.||++
T Consensus 282 ~~~~~~l-~i~G~g~~------~~~~~l~~~~~~~~~~~~~~g~~~~~~~~~~~~~adv--~v~ps~~e~~~~~~~EAma 352 (439)
T 3fro_A 282 EFQEMRF-IIIGKGDP------ELEGWARSLEEKHGNVKVITEMLSREFVRELYGSVDF--VIIPSYFEPFGLVALEAMC 352 (439)
T ss_dssp GGGGEEE-EEECCCCH------HHHHHHHHHHHHCTTEEEECSCCCHHHHHHHHTTCSE--EEECBSCCSSCHHHHHHHH
T ss_pred cCCCeEE-EEEcCCCh------hHHHHHHHHHhhcCCEEEEcCCCCHHHHHHHHHHCCE--EEeCCCCCCccHHHHHHHH
Confidence 3333 33443210 0001 22234454455567899865 7888988 5522 33468999999
Q ss_pred cCcceeccccccchhhHHHHHHhhhcceeeecCCCCcCHHHHHHHHHHHhc-CCch-HHHHHHHHHHHHHHHHHhcCCCc
Q 011789 378 CGVPLLCFPLYTDQFTNRKLAVDDWNVGLNLSNEKVITKEEVSKNVHLLMG-EKSG-AKYRNAAKQVKKAMEYALQPNGS 455 (477)
Q Consensus 378 ~GvP~v~~P~~~DQ~~na~~v~~~~G~G~~~~~~~~~~~~~l~~~i~~~l~-~~~~-~~~~~~a~~l~~~~~~~~~~gg~ 455 (477)
+|+|+|+.. .......+ +. |.|..+ +.-+.+++.++|.++++ |++. +.+.+++++..+ .-+
T Consensus 353 ~G~Pvi~s~----~~~~~e~~-~~-~~g~~~---~~~d~~~la~~i~~ll~~~~~~~~~~~~~~~~~~~--------~~s 415 (439)
T 3fro_A 353 LGAIPIASA----VGGLRDII-TN-ETGILV---KAGDPGELANAILKALELSRSDLSKFRENCKKRAM--------SFS 415 (439)
T ss_dssp TTCEEEEES----STHHHHHC-CT-TTCEEE---CTTCHHHHHHHHHHHHHHTTTTTHHHHHHHHHHHH--------TSC
T ss_pred CCCCeEEcC----CCCcceeE-Ec-CceEEe---CCCCHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHh--------hCc
Confidence 999999854 34444444 45 788888 45589999999999998 7622 344444444432 245
Q ss_pred hHHHHHHHHHHHHHhhhhh
Q 011789 456 SDKNMDQFIKDLKTRIQSK 474 (477)
Q Consensus 456 ~~~~~~~~~~~~~~~~~~~ 474 (477)
.+...+++.+.+++.+...
T Consensus 416 ~~~~~~~~~~~~~~~~~~~ 434 (439)
T 3fro_A 416 WEKSAERYVKAYTGSIDRA 434 (439)
T ss_dssp HHHHHHHHHHHHHTCSCCB
T ss_pred HHHHHHHHHHHHHHHHHhh
Confidence 5667777777776665443
No 28
>3okp_A GDP-mannose-dependent alpha-(1-6)-phosphatidylino monomannoside mannosyltransferase...; GT-B fold, alpha-mannosyltransferase; HET: GDD; 2.00A {Corynebacterium glutamicum} PDB: 3okc_A* 3oka_A*
Probab=99.36 E-value=1.2e-10 Score=115.17 Aligned_cols=349 Identities=12% Similarity=0.064 Sum_probs=186.3
Q ss_pred CCCcEEEEEcC--C--CccCHHHHHHHHHHHHhCCCeEEEEeCCcchhhh-c-cCCCCCCccccccccCCCCCeEEEecC
Q 011789 6 TQKPHAIFISY--P--LQGHVNPSVQLALKLASQGFTITFVNTHFIHQQM-T-KASPEMGSDIFAGVRKSGLDIRYMTLS 79 (477)
Q Consensus 6 ~~~~~il~~~~--~--~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~~-~-~g~~~~~~~~~~~~~~~~~~~~~~~l~ 79 (477)
..||||+|++. + ..|.-.-+..|++.| +||+|++++........ . .... ++.+..++
T Consensus 2 ~~~mkIl~v~~~~~p~~gG~~~~~~~l~~~L--~g~~v~v~~~~~~~~~~~~~~~~~---------------~~~~~~~~ 64 (394)
T 3okp_A 2 SASRKTLVVTNDFPPRIGGIQSYLRDFIATQ--DPESIVVFASTQNAEEAHAYDKTL---------------DYEVIRWP 64 (394)
T ss_dssp --CCCEEEEESCCTTSCSHHHHHHHHHHTTS--CGGGEEEEEECSSHHHHHHHHTTC---------------SSEEEEES
T ss_pred CCCceEEEEeCccCCccchHHHHHHHHHHHh--cCCeEEEEECCCCccchhhhcccc---------------ceEEEEcc
Confidence 46799999985 3 468888899999999 79999999987765421 1 1111 67777776
Q ss_pred CCCCCCCCCCCcHHHHHHHHHHHhHHHHHHHHHHhHhcCCCccEEEecCCCc--chHHHHHHhCCceEEEecchhHHHHH
Q 011789 80 DGLPLGFDRSLNHEQFMSSLLHVFSAHAEEVIGQIVRSGENVHCLIADTYFV--WPSKLAKKFGLYYISFWTESALVFTL 157 (477)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~pD~iI~D~~~~--~~~~~A~~~gIP~v~~~~~~~~~~~~ 157 (477)
..... ... .....+..++++. +||+|++..... ....+++.+|+|.++++.......
T Consensus 65 ~~~~~-----~~~---------~~~~~l~~~~~~~-----~~Dvv~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~-- 123 (394)
T 3okp_A 65 RSVML-----PTP---------TTAHAMAEIIRER-----EIDNVWFGAAAPLALMAGTAKQAGASKVIASTHGHEVG-- 123 (394)
T ss_dssp SSSCC-----SCH---------HHHHHHHHHHHHT-----TCSEEEESSCTTGGGGHHHHHHTTCSEEEEECCSTHHH--
T ss_pred ccccc-----cch---------hhHHHHHHHHHhc-----CCCEEEECCcchHHHHHHHHHhcCCCcEEEEeccchhh--
Confidence 43211 111 1112233444443 999999865444 456678999999555422211000
Q ss_pred HhhhhhhhhcCCcCCCCCCCCcccccCCCCCCCCCCCccccccCCCchhHHHHHHHHhhhccCCcEEEEcchhhccHHHH
Q 011789 158 YYHLDLLTINGHFQCYDCREDTIDYIPGVKAINPKDTTSYLQETDTTSACHQIIFNSFQDTRNADYVLCNTVHELESEAV 237 (477)
Q Consensus 158 ~~~~~~~~~~~~~p~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~l~~~~~ 237 (477)
+ . . ......+.+ .....++.+++.|....+.- .
T Consensus 124 ------------------------~-~------------------~-~~~~~~~~~--~~~~~~d~ii~~s~~~~~~~-~ 156 (394)
T 3okp_A 124 ------------------------W-S------------------M-LPGSRQSLR--KIGTEVDVLTYISQYTLRRF-K 156 (394)
T ss_dssp ------------------------H-T------------------T-SHHHHHHHH--HHHHHCSEEEESCHHHHHHH-H
T ss_pred ------------------------h-h------------------h-cchhhHHHH--HHHHhCCEEEEcCHHHHHHH-H
Confidence 0 0 0 001111111 12256788888876544422 1
Q ss_pred HHHHccCC-EEEeCccCCCCCCccccccccCCc-cccchhhccCCCCcEEEEEeccccc-CCHHHHHHHHHHHHh--CCC
Q 011789 238 TALKAKIP-FITMGPISLNKFSDRVVATSLWSE-SDCSQWLDKQPKGSVLYVSFGSYAH-VSKRDLIEIANGIAK--SKV 312 (477)
Q Consensus 238 ~~~~~~~p-~~~vGp~~~~~~~~~~~~~~~~~~-~~l~~~l~~~~~~~~I~vs~Gs~~~-~~~~~~~~~~~al~~--~~~ 312 (477)
.... ... +..+........-... .... .++.+.+... ++..+++..|+... -....+-..+..+.. .+.
T Consensus 157 ~~~~-~~~~~~vi~ngv~~~~~~~~----~~~~~~~~~~~~~~~-~~~~~i~~~G~~~~~Kg~~~li~a~~~l~~~~~~~ 230 (394)
T 3okp_A 157 SAFG-SHPTFEHLPSGVDVKRFTPA----TPEDKSATRKKLGFT-DTTPVIACNSRLVPRKGQDSLIKAMPQVIAARPDA 230 (394)
T ss_dssp HHHC-SSSEEEECCCCBCTTTSCCC----CHHHHHHHHHHTTCC-TTCCEEEEESCSCGGGCHHHHHHHHHHHHHHSTTC
T ss_pred HhcC-CCCCeEEecCCcCHHHcCCC----CchhhHHHHHhcCCC-cCceEEEEEeccccccCHHHHHHHHHHHHhhCCCe
Confidence 1111 112 4444433322110000 0000 2222222222 33467777888742 122222222333322 244
Q ss_pred eEEEEEcCCCCCCCCCCCCchhHHH---hcCCCeEEEeeccHHH---hhccCCCCcccc-----------ccCCchhhHH
Q 011789 313 TFIWILRPDIVSSDDPNPLPEDFKK---EVADRSMIITWCCQTS---VLAHPAIGGFLT-----------HCGWNSVLEG 375 (477)
Q Consensus 313 ~~i~~~~~~~~~~~~~~~lp~~~~~---~~~~nv~v~~~~p~~~---lL~~~~~~~~It-----------HgG~gs~~ea 375 (477)
++++ ++.+ ...+.+++ .+.++|.+.+|+|+.+ ++..+++ +|. -|.-+++.||
T Consensus 231 ~l~i-~G~g--------~~~~~l~~~~~~~~~~v~~~g~~~~~~~~~~~~~ad~--~v~ps~~~~~~~~~e~~~~~~~Ea 299 (394)
T 3okp_A 231 QLLI-VGSG--------RYESTLRRLATDVSQNVKFLGRLEYQDMINTLAAADI--FAMPARTRGGGLDVEGLGIVYLEA 299 (394)
T ss_dssp EEEE-ECCC--------TTHHHHHHHTGGGGGGEEEEESCCHHHHHHHHHHCSE--EEECCCCBGGGTBCCSSCHHHHHH
T ss_pred EEEE-EcCc--------hHHHHHHHHHhcccCeEEEcCCCCHHHHHHHHHhCCE--EEecCccccccccccccCcHHHHH
Confidence 5444 3432 12222222 2347899999998665 7889998 664 4445689999
Q ss_pred HhcCcceeccccccchhhHHHHHHhhhcceeeecCCCCcCHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHhcCCCc
Q 011789 376 LWCGVPLLCFPLYTDQFTNRKLAVDDWNVGLNLSNEKVITKEEVSKNVHLLMGEKSGAKYRNAAKQVKKAMEYALQPNGS 455 (477)
Q Consensus 376 l~~GvP~v~~P~~~DQ~~na~~v~~~~G~G~~~~~~~~~~~~~l~~~i~~~l~~~~~~~~~~~a~~l~~~~~~~~~~gg~ 455 (477)
+++|+|+|+.+... ... +... |.|..+ +.-+.+++.++|.++++|+ +.+++..+-+.+... +.-+
T Consensus 300 ~a~G~PvI~~~~~~----~~e-~i~~-~~g~~~---~~~d~~~l~~~i~~l~~~~---~~~~~~~~~~~~~~~---~~~s 364 (394)
T 3okp_A 300 QACGVPVIAGTSGG----APE-TVTP-ATGLVV---EGSDVDKLSELLIELLDDP---IRRAAMGAAGRAHVE---AEWS 364 (394)
T ss_dssp HHTTCCEEECSSTT----GGG-GCCT-TTEEEC---CTTCHHHHHHHHHHHHTCH---HHHHHHHHHHHHHHH---HHTB
T ss_pred HHcCCCEEEeCCCC----hHH-HHhc-CCceEe---CCCCHHHHHHHHHHHHhCH---HHHHHHHHHHHHHHH---HhCC
Confidence 99999999976532 222 2344 567777 4458999999999999987 433333222222221 1234
Q ss_pred hHHHHHHHHHHHHHhh
Q 011789 456 SDKNMDQFIKDLKTRI 471 (477)
Q Consensus 456 ~~~~~~~~~~~~~~~~ 471 (477)
.+...+++.+.+++..
T Consensus 365 ~~~~~~~~~~~~~~~~ 380 (394)
T 3okp_A 365 WEIMGERLTNILQSEP 380 (394)
T ss_dssp HHHHHHHHHHHHHSCC
T ss_pred HHHHHHHHHHHHHHhc
Confidence 5566666666666544
No 29
>2gek_A Phosphatidylinositol mannosyltransferase (PIMA); GT4 glycosyltransferase, rossmann fold, complex; HET: GDP; 2.40A {Mycobacterium smegmatis} PDB: 2gej_A*
Probab=99.35 E-value=1.5e-10 Score=115.02 Aligned_cols=342 Identities=8% Similarity=0.029 Sum_probs=179.1
Q ss_pred CCCcEEEEEcCC---C-ccCHHHHHHHHHHHHhCCCeEEEEeCCcchhhhccCCCCCCccccccccCCCCCeEEEecCCC
Q 011789 6 TQKPHAIFISYP---L-QGHVNPSVQLALKLASQGFTITFVNTHFIHQQMTKASPEMGSDIFAGVRKSGLDIRYMTLSDG 81 (477)
Q Consensus 6 ~~~~~il~~~~~---~-~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~ 81 (477)
..||||+|++.. . .|.-.-...|+++|.++||+|++++............. . .+ .+..++..
T Consensus 18 ~~~MkIl~i~~~~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~~-----------~--~~-~~~~~~~~ 83 (406)
T 2gek_A 18 GSHMRIGMVCPYSFDVPGGVQSHVLQLAEVLRDAGHEVSVLAPASPHVKLPDYVV-----------S--GG-KAVPIPYN 83 (406)
T ss_dssp ---CEEEEECSSCTTSCCHHHHHHHHHHHHHHHTTCEEEEEESCCTTSCCCTTEE-----------E--CC-CCC-----
T ss_pred CCcceEEEEeccCCCCCCcHHHHHHHHHHHHHHCCCeEEEEecCCccccCCcccc-----------c--CC-cEEecccc
Confidence 578999999852 2 56678899999999999999999998765431110000 0 01 11111100
Q ss_pred CCCCCCCCCcHHHHHHHHHHHhHHHHHHHHHHhHhcCCCccEEEecCCCc--chHHHHHHhCCceEEEecchhHHHHHHh
Q 011789 82 LPLGFDRSLNHEQFMSSLLHVFSAHAEEVIGQIVRSGENVHCLIADTYFV--WPSKLAKKFGLYYISFWTESALVFTLYY 159 (477)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~pD~iI~D~~~~--~~~~~A~~~gIP~v~~~~~~~~~~~~~~ 159 (477)
.. ... +. +.......+..++... +||+|++..... .+..+++..++|+|.......
T Consensus 84 ~~--------~~~-~~-~~~~~~~~l~~~l~~~-----~~Dii~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~------- 141 (406)
T 2gek_A 84 GS--------VAR-LR-FGPATHRKVKKWIAEG-----DFDVLHIHEPNAPSLSMLALQAAEGPIVATFHTST------- 141 (406)
T ss_dssp -----------------CCHHHHHHHHHHHHHH-----CCSEEEEECCCSSSHHHHHHHHEESSEEEEECCCC-------
T ss_pred CC--------ccc-cc-ccHHHHHHHHHHHHhc-----CCCEEEECCccchHHHHHHHHhcCCCEEEEEcCcc-------
Confidence 00 000 00 0000112334444444 999999876544 345567778999988633210
Q ss_pred hhhhhhhcCCcCCCCCCCCcccccCCCCCCCCCCCccccccCCCchhHHHHHHHHh-hhccCCcEEEEcchhhccHHHHH
Q 011789 160 HLDLLTINGHFQCYDCREDTIDYIPGVKAINPKDTTSYLQETDTTSACHQIIFNSF-QDTRNADYVLCNTVHELESEAVT 238 (477)
Q Consensus 160 ~~~~~~~~~~~p~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~s~~~l~~~~~~ 238 (477)
+. ......+.+.. .....++.+++.+....+.-
T Consensus 142 ------------------------~~-------------------~~~~~~~~~~~~~~~~~~d~ii~~s~~~~~~~--- 175 (406)
T 2gek_A 142 ------------------------TK-------------------SLTLSVFQGILRPYHEKIIGRIAVSDLARRWQ--- 175 (406)
T ss_dssp ------------------------CS-------------------HHHHHHHHSTTHHHHTTCSEEEESSHHHHHHH---
T ss_pred ------------------------hh-------------------hhhHHHHHHHHHHHHhhCCEEEECCHHHHHHH---
Confidence 00 00001111111 22367788888776543321
Q ss_pred HHHccC--C-EEEeCccCCCCCCccccccccCCccccchhhccCCCCcEEEEEeccc-cc-CCHHHHHHHHHHHHhC--C
Q 011789 239 ALKAKI--P-FITMGPISLNKFSDRVVATSLWSESDCSQWLDKQPKGSVLYVSFGSY-AH-VSKRDLIEIANGIAKS--K 311 (477)
Q Consensus 239 ~~~~~~--p-~~~vGp~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~I~vs~Gs~-~~-~~~~~~~~~~~al~~~--~ 311 (477)
.... . + .+........ ..+ ..-..-+ .++..+++..|+. .. -....+-..+..+... +
T Consensus 176 --~~~~~~~~~-vi~~~v~~~~-~~~--------~~~~~~~---~~~~~~i~~~G~~~~~~Kg~~~li~a~~~l~~~~~~ 240 (406)
T 2gek_A 176 --MEALGSDAV-EIPNGVDVAS-FAD--------APLLDGY---PREGRTVLFLGRYDEPRKGMAVLLAALPKLVARFPD 240 (406)
T ss_dssp --HHHHSSCEE-ECCCCBCHHH-HHT--------CCCCTTC---SCSSCEEEEESCTTSGGGCHHHHHHHHHHHHTTSTT
T ss_pred --HHhcCCCcE-EecCCCChhh-cCC--------Cchhhhc---cCCCeEEEEEeeeCccccCHHHHHHHHHHHHHHCCC
Confidence 1111 2 4 4433221100 000 0000000 1122567777887 42 1222332333333332 3
Q ss_pred CeEEEEEcCCCCCCCCCCCCchhHHHh---cCCCeEEEeeccHH---HhhccCCCCcccc----ccCCc-hhhHHHhcCc
Q 011789 312 VTFIWILRPDIVSSDDPNPLPEDFKKE---VADRSMIITWCCQT---SVLAHPAIGGFLT----HCGWN-SVLEGLWCGV 380 (477)
Q Consensus 312 ~~~i~~~~~~~~~~~~~~~lp~~~~~~---~~~nv~v~~~~p~~---~lL~~~~~~~~It----HgG~g-s~~eal~~Gv 380 (477)
.+++ .++.. .. +.+++. +.++|.+.+++|+. .++..+++ +|. +.|+| ++.||+++|+
T Consensus 241 ~~l~-i~G~~--------~~-~~l~~~~~~~~~~v~~~g~~~~~~~~~~~~~adv--~v~ps~~~e~~~~~~~Ea~a~G~ 308 (406)
T 2gek_A 241 VEIL-IVGRG--------DE-DELREQAGDLAGHLRFLGQVDDATKASAMRSADV--YCAPHLGGESFGIVLVEAMAAGT 308 (406)
T ss_dssp CEEE-EESCS--------CH-HHHHHHTGGGGGGEEECCSCCHHHHHHHHHHSSE--EEECCCSCCSSCHHHHHHHHHTC
T ss_pred eEEE-EEcCC--------cH-HHHHHHHHhccCcEEEEecCCHHHHHHHHHHCCE--EEecCCCCCCCchHHHHHHHcCC
Confidence 4443 34432 11 333332 24689999999986 58999998 552 44554 8999999999
Q ss_pred ceeccccccchhhHHHHHHhhhcceeeecCCCCcCHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHhcCCCchHHHH
Q 011789 381 PLLCFPLYTDQFTNRKLAVDDWNVGLNLSNEKVITKEEVSKNVHLLMGEKSGAKYRNAAKQVKKAMEYALQPNGSSDKNM 460 (477)
Q Consensus 381 P~v~~P~~~DQ~~na~~v~~~~G~G~~~~~~~~~~~~~l~~~i~~~l~~~~~~~~~~~a~~l~~~~~~~~~~gg~~~~~~ 460 (477)
|+|+.+. ......+.+. +.|... +.-+.+++.++|.++++|+ +.+++..+-+.+.. + .-+.+...
T Consensus 309 PvI~~~~----~~~~e~i~~~-~~g~~~---~~~d~~~l~~~i~~l~~~~---~~~~~~~~~~~~~~---~-~~s~~~~~ 373 (406)
T 2gek_A 309 AVVASDL----DAFRRVLADG-DAGRLV---PVDDADGMAAALIGILEDD---QLRAGYVARASERV---H-RYDWSVVS 373 (406)
T ss_dssp EEEECCC----HHHHHHHTTT-TSSEEC---CTTCHHHHHHHHHHHHHCH---HHHHHHHHHHHHHG---G-GGBHHHHH
T ss_pred CEEEecC----CcHHHHhcCC-CceEEe---CCCCHHHHHHHHHHHHcCH---HHHHHHHHHHHHHH---H-hCCHHHHH
Confidence 9998654 5677777777 788888 4458899999999999987 54433322222222 2 23445555
Q ss_pred HHHHHHHHHhh
Q 011789 461 DQFIKDLKTRI 471 (477)
Q Consensus 461 ~~~~~~~~~~~ 471 (477)
+++.+.+.+.+
T Consensus 374 ~~~~~~~~~~~ 384 (406)
T 2gek_A 374 AQIMRVYETVS 384 (406)
T ss_dssp HHHHHHHHHHC
T ss_pred HHHHHHHHHHH
Confidence 56655555444
No 30
>3ot5_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, center for structural genomics of infec diseases, csgid, alpha beta; HET: PGE; 2.20A {Listeria monocytogenes}
Probab=99.35 E-value=1.4e-11 Score=122.61 Aligned_cols=136 Identities=13% Similarity=0.156 Sum_probs=86.1
Q ss_pred CCcEEEEEecccccCCHHHHHHHHHHHHh-----CCCeEEEEEcCCCCCCCCCCCCchhHHHh--cCCCeEEEeeccH--
Q 011789 281 KGSVLYVSFGSYAHVSKRDLIEIANGIAK-----SKVTFIWILRPDIVSSDDPNPLPEDFKKE--VADRSMIITWCCQ-- 351 (477)
Q Consensus 281 ~~~~I~vs~Gs~~~~~~~~~~~~~~al~~-----~~~~~i~~~~~~~~~~~~~~~lp~~~~~~--~~~nv~v~~~~p~-- 351 (477)
++++++++.|....... .+..+++++.. .+.++++..+.+. .+-+..++. ..+++++.+++++
T Consensus 223 ~~~~vlv~~~r~~~~~~-~l~~ll~a~~~l~~~~~~~~~v~~~~~~~-------~~~~~l~~~~~~~~~v~l~~~l~~~~ 294 (403)
T 3ot5_A 223 DNRLILMTAHRRENLGE-PMQGMFEAVREIVESREDTELVYPMHLNP-------AVREKAMAILGGHERIHLIEPLDAID 294 (403)
T ss_dssp TCEEEEECCCCHHHHTT-HHHHHHHHHHHHHHHCTTEEEEEECCSCH-------HHHHHHHHHHTTCTTEEEECCCCHHH
T ss_pred CCCEEEEEeCcccccCc-HHHHHHHHHHHHHHhCCCceEEEecCCCH-------HHHHHHHHHhCCCCCEEEeCCCCHHH
Confidence 45678887664322111 23445555433 3455665543220 011122221 2368999998864
Q ss_pred -HHhhccCCCCccccccCCchhhHHHhcCcceeccccccchhhHHHHHHhhhcceeeecCCCCcCHHHHHHHHHHHhcCC
Q 011789 352 -TSVLAHPAIGGFLTHCGWNSVLEGLWCGVPLLCFPLYTDQFTNRKLAVDDWNVGLNLSNEKVITKEEVSKNVHLLMGEK 430 (477)
Q Consensus 352 -~~lL~~~~~~~~ItHgG~gs~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~G~~~~~~~~~~~~~l~~~i~~~l~~~ 430 (477)
..+++.+++ +|+-.| |.+.||+++|+|+|++|-..+++. +.+. |.|+.+ . .+.++|.+++.++++|+
T Consensus 295 ~~~l~~~ad~--vv~~SG-g~~~EA~a~g~PvV~~~~~~~~~e----~v~~-g~~~lv---~-~d~~~l~~ai~~ll~~~ 362 (403)
T 3ot5_A 295 FHNFLRKSYL--VFTDSG-GVQEEAPGMGVPVLVLRDTTERPE----GIEA-GTLKLI---G-TNKENLIKEALDLLDNK 362 (403)
T ss_dssp HHHHHHHEEE--EEECCH-HHHHHGGGTTCCEEECCSSCSCHH----HHHH-TSEEEC---C-SCHHHHHHHHHHHHHCH
T ss_pred HHHHHHhcCE--EEECCc-cHHHHHHHhCCCEEEecCCCcchh----heeC-CcEEEc---C-CCHHHHHHHHHHHHcCH
Confidence 358899998 888764 223699999999999976666554 3477 888877 2 48999999999999988
Q ss_pred chHHHHHHH
Q 011789 431 SGAKYRNAA 439 (477)
Q Consensus 431 ~~~~~~~~a 439 (477)
+.+++.
T Consensus 363 ---~~~~~m 368 (403)
T 3ot5_A 363 ---ESHDKM 368 (403)
T ss_dssp ---HHHHHH
T ss_pred ---HHHHHH
Confidence 555443
No 31
>3dzc_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, in diseases, isomerase, center for structural genomics of INFE diseases, csgid; 2.35A {Vibrio cholerae}
Probab=99.33 E-value=1.9e-11 Score=121.51 Aligned_cols=330 Identities=10% Similarity=0.059 Sum_probs=170.7
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHhC-CCeEEEEeCCcchhhhccCCCCCCccccccccCCCCCeE-EEecCCCCC
Q 011789 6 TQKPHAIFISYPLQGHVNPSVQLALKLASQ-GFTITFVNTHFIHQQMTKASPEMGSDIFAGVRKSGLDIR-YMTLSDGLP 83 (477)
Q Consensus 6 ~~~~~il~~~~~~~GH~~p~l~La~~L~~r-Gh~Vt~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~-~~~l~~~~~ 83 (477)
..||||++++ |++....-+.+|.++|.++ |+++.++.+....+....+.+ .. ++. -..+.
T Consensus 23 ~~m~ki~~v~-Gtr~~~~~~a~li~~l~~~~~~~~~~~~tG~h~~~~~~~~~-----------~~--~i~~~~~l~---- 84 (396)
T 3dzc_A 23 NAMKKVLIVF-GTRPEAIKMAPLVQQLCQDNRFVAKVCVTGQHREMLDQVLE-----------LF--SITPDFDLN---- 84 (396)
T ss_dssp -CCEEEEEEE-CSHHHHHHHHHHHHHHHHCTTEEEEEEECCSSSHHHHHHHH-----------HT--TCCCSEECC----
T ss_pred CCCCeEEEEE-eccHhHHHHHHHHHHHHhCCCCcEEEEEecccHHHHHHHHH-----------hc--CCCCceeee----
Confidence 3578888776 6666777788899999988 789876666554432211100 00 110 00111
Q ss_pred CCCCCCCcHHHHHHHHHHHhHHHHHHHHHHhHhcCCCccEEEecC--CC-cchHHHHHHhCCceEEEecchhHHHHHHhh
Q 011789 84 LGFDRSLNHEQFMSSLLHVFSAHAEEVIGQIVRSGENVHCLIADT--YF-VWPSKLAKKFGLYYISFWTESALVFTLYYH 160 (477)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~pD~iI~D~--~~-~~~~~~A~~~gIP~v~~~~~~~~~~~~~~~ 160 (477)
. .....+..... ......+.+++.+. +||+|++-. .. +.+..+|+.+|||++.+..
T Consensus 85 ~-~~~~~~~~~~~----~~~~~~l~~~l~~~-----kPDvVi~~g~~~~~~~~~~aa~~~~IPv~h~~a----------- 143 (396)
T 3dzc_A 85 I-MEPGQTLNGVT----SKILLGMQQVLSSE-----QPDVVLVHGDTATTFAASLAAYYQQIPVGHVEA----------- 143 (396)
T ss_dssp C-CCTTCCHHHHH----HHHHHHHHHHHHHH-----CCSEEEEETTSHHHHHHHHHHHTTTCCEEEETC-----------
T ss_pred c-CCCCCCHHHHH----HHHHHHHHHHHHhc-----CCCEEEEECCchhHHHHHHHHHHhCCCEEEEEC-----------
Confidence 0 01112222222 22334455666665 999999743 22 2446788999999775411
Q ss_pred hhhhhhcCCcCCCCCCCCcccccCCCCCCCCCCCccccccCCCchhHHHHHHHHhhhccCCcEEEEcchhhccHHHHHHH
Q 011789 161 LDLLTINGHFQCYDCREDTIDYIPGVKAINPKDTTSYLQETDTTSACHQIIFNSFQDTRNADYVLCNTVHELESEAVTAL 240 (477)
Q Consensus 161 ~~~~~~~~~~p~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~l~~~~~~~~ 240 (477)
++..+.++. .......+.+. . ..++.+++.+...-+. +.
T Consensus 144 ------------------------g~rs~~~~~--------~~~~~~~r~~~---~--~~a~~~~~~se~~~~~----l~ 182 (396)
T 3dzc_A 144 ------------------------GLRTGNIYS--------PWPEEGNRKLT---A--ALTQYHFAPTDTSRAN----LL 182 (396)
T ss_dssp ------------------------CCCCSCTTS--------STTHHHHHHHH---H--HTCSEEEESSHHHHHH----HH
T ss_pred ------------------------Ccccccccc--------CCcHHHHHHHH---H--HhcCEEECCCHHHHHH----HH
Confidence 000000000 00011122211 1 3456777766542221 11
Q ss_pred HccC-C--EEEeCccCCCCCCccccccccCC--ccccchhhc-cCCCCcEEEEEecccccCCHHHHHHHHHHHHh-----
Q 011789 241 KAKI-P--FITMGPISLNKFSDRVVATSLWS--ESDCSQWLD-KQPKGSVLYVSFGSYAHVSKRDLIEIANGIAK----- 309 (477)
Q Consensus 241 ~~~~-p--~~~vGp~~~~~~~~~~~~~~~~~--~~~l~~~l~-~~~~~~~I~vs~Gs~~~~~~~~~~~~~~al~~----- 309 (477)
+... + ++.+|....+............. .+++.+.+. -.+++++|+++.+-..+... .+..++++++.
T Consensus 183 ~~G~~~~ki~vvGn~~~d~~~~~~~~~~~~~~~~~~~r~~lg~l~~~~~~vlv~~hR~~~~~~-~~~~ll~A~~~l~~~~ 261 (396)
T 3dzc_A 183 QENYNAENIFVTGNTVIDALLAVREKIHTDMDLQATLESQFPMLDASKKLILVTGHRRESFGG-GFERICQALITTAEQH 261 (396)
T ss_dssp HTTCCGGGEEECCCHHHHHHHHHHHHHHHCHHHHHHHHHTCTTCCTTSEEEEEECSCBCCCTT-HHHHHHHHHHHHHHHC
T ss_pred HcCCCcCcEEEECCcHHHHHHHhhhhcccchhhHHHHHHHhCccCCCCCEEEEEECCcccchh-HHHHHHHHHHHHHHhC
Confidence 2222 3 78888543221100000000000 011112222 11345677777633222222 24556666544
Q ss_pred CCCeEEEEEcCCCCCCCCCCCCchhHHHh--cCCCeEEEeeccH---HHhhccCCCCccccccCCchhhHHHhcCcceec
Q 011789 310 SKVTFIWILRPDIVSSDDPNPLPEDFKKE--VADRSMIITWCCQ---TSVLAHPAIGGFLTHCGWNSVLEGLWCGVPLLC 384 (477)
Q Consensus 310 ~~~~~i~~~~~~~~~~~~~~~lp~~~~~~--~~~nv~v~~~~p~---~~lL~~~~~~~~ItHgG~gs~~eal~~GvP~v~ 384 (477)
.+.++++..+.+. .+-+..++. ..+++++.+++++ ..+++.+++ +|+-.| |.+.||+++|+|+|+
T Consensus 262 ~~~~~v~~~g~~~-------~~~~~l~~~~~~~~~v~~~~~lg~~~~~~l~~~ad~--vv~~SG-g~~~EA~a~G~PvV~ 331 (396)
T 3dzc_A 262 PECQILYPVHLNP-------NVREPVNKLLKGVSNIVLIEPQQYLPFVYLMDRAHI--ILTDSG-GIQEEAPSLGKPVLV 331 (396)
T ss_dssp TTEEEEEECCBCH-------HHHHHHHHHTTTCTTEEEECCCCHHHHHHHHHHCSE--EEESCS-GGGTTGGGGTCCEEE
T ss_pred CCceEEEEeCCCh-------HHHHHHHHHHcCCCCEEEeCCCCHHHHHHHHHhcCE--EEECCc-cHHHHHHHcCCCEEE
Confidence 3455665544220 011222221 2368999877653 458999998 999887 666799999999999
Q ss_pred cccccchhhHHHHHHhhhcceeeecCCCCcCHHHHHHHHHHHhcCCchHHHHHH
Q 011789 385 FPLYTDQFTNRKLAVDDWNVGLNLSNEKVITKEEVSKNVHLLMGEKSGAKYRNA 438 (477)
Q Consensus 385 ~P~~~DQ~~na~~v~~~~G~G~~~~~~~~~~~~~l~~~i~~~l~~~~~~~~~~~ 438 (477)
..-..+++ .+.+. |.++.+ . .+.++|.+++.++++|+ +.+++
T Consensus 332 ~~~~~~~~----e~v~~-G~~~lv---~-~d~~~l~~ai~~ll~d~---~~~~~ 373 (396)
T 3dzc_A 332 MRETTERP----EAVAA-GTVKLV---G-TNQQQICDALSLLLTDP---QAYQA 373 (396)
T ss_dssp CCSSCSCH----HHHHH-TSEEEC---T-TCHHHHHHHHHHHHHCH---HHHHH
T ss_pred ccCCCcch----HHHHc-CceEEc---C-CCHHHHHHHHHHHHcCH---HHHHH
Confidence 75445543 34577 888666 2 37999999999999988 55443
No 32
>1vgv_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, isomerase; HET: UD1; 2.31A {Escherichia coli} SCOP: c.87.1.3 PDB: 1f6d_A*
Probab=99.31 E-value=2.8e-11 Score=119.53 Aligned_cols=130 Identities=16% Similarity=0.207 Sum_probs=85.3
Q ss_pred CCcEEEEEecccccCCHHHHHHHHHHHHh----C-CCeEEEEEcCCCCCCCCCCCCchhHHHhc--CCCeEEEeeccH--
Q 011789 281 KGSVLYVSFGSYAHVSKRDLIEIANGIAK----S-KVTFIWILRPDIVSSDDPNPLPEDFKKEV--ADRSMIITWCCQ-- 351 (477)
Q Consensus 281 ~~~~I~vs~Gs~~~~~~~~~~~~~~al~~----~-~~~~i~~~~~~~~~~~~~~~lp~~~~~~~--~~nv~v~~~~p~-- 351 (477)
++++++++.|...... +.+..+++++.. . +..+++..+.+ ..+-+..++.. .++|.+.+++++
T Consensus 204 ~~~~vl~~~gr~~~~~-kg~~~li~a~~~l~~~~~~~~l~i~~g~~-------~~~~~~l~~~~~~~~~v~~~g~~~~~~ 275 (384)
T 1vgv_A 204 DKKMILVTGHRRESFG-RGFEEICHALADIATTHQDIQIVYPVHLN-------PNVREPVNRILGHVKNVILIDPQEYLP 275 (384)
T ss_dssp TSEEEEEECCCBSSCC-HHHHHHHHHHHHHHHHCTTEEEEEECCBC-------HHHHHHHHHHHTTCTTEEEECCCCHHH
T ss_pred CCCEEEEEeCCccccc-hHHHHHHHHHHHHHhhCCCeEEEEEcCCC-------HHHHHHHHHHhhcCCCEEEeCCCCHHH
Confidence 4567888888765432 234445555443 2 44555433321 00112222222 268998776665
Q ss_pred -HHhhccCCCCccccccCCchhhHHHhcCcceeccccccchhhHHHHHHhhhcceeeecCCCCcCHHHHHHHHHHHhcCC
Q 011789 352 -TSVLAHPAIGGFLTHCGWNSVLEGLWCGVPLLCFPLYTDQFTNRKLAVDDWNVGLNLSNEKVITKEEVSKNVHLLMGEK 430 (477)
Q Consensus 352 -~~lL~~~~~~~~ItHgG~gs~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~G~~~~~~~~~~~~~l~~~i~~~l~~~ 430 (477)
..+|..+++ ||+..| |.+.||+++|+|+|+.+..... ..+.+. |.|..+ +. +.++|.++|.++++|+
T Consensus 276 ~~~~~~~ad~--~v~~Sg-~~~lEA~a~G~PvI~~~~~~~~----~e~v~~-g~g~lv---~~-d~~~la~~i~~ll~d~ 343 (384)
T 1vgv_A 276 FVWLMNHAWL--ILTDSG-GIQEEAPSLGKPVLVMRDTTER----PEAVTA-GTVRLV---GT-DKQRIVEEVTRLLKDE 343 (384)
T ss_dssp HHHHHHHCSE--EEESSS-TGGGTGGGGTCCEEEESSCCSC----HHHHHH-TSEEEE---CS-SHHHHHHHHHHHHHCH
T ss_pred HHHHHHhCcE--EEECCc-chHHHHHHcCCCEEEccCCCCc----chhhhC-CceEEe---CC-CHHHHHHHHHHHHhCh
Confidence 358999998 888875 4488999999999999874443 335677 888888 34 8999999999999987
No 33
>2r60_A Glycosyl transferase, group 1; rossmann-fold; 1.80A {Halothermothrix orenii} PDB: 2r66_A* 2r68_A*
Probab=99.29 E-value=1.3e-09 Score=111.65 Aligned_cols=170 Identities=9% Similarity=0.102 Sum_probs=100.0
Q ss_pred cEEEEEecccccCCHHHHHHHHHHHHhCC-----CeEEEEEcCCCCCCCCCCCC-------chhHHH---h--cCCCeEE
Q 011789 283 SVLYVSFGSYAHVSKRDLIEIANGIAKSK-----VTFIWILRPDIVSSDDPNPL-------PEDFKK---E--VADRSMI 345 (477)
Q Consensus 283 ~~I~vs~Gs~~~~~~~~~~~~~~al~~~~-----~~~i~~~~~~~~~~~~~~~l-------p~~~~~---~--~~~nv~v 345 (477)
..+++..|.+.. .+....++++++... ...++.++.......+...+ -+.+++ + +.++|.+
T Consensus 262 ~~~i~~vGrl~~--~Kg~~~li~a~~~l~~~~~~~~~l~i~G~~~~~~~~y~~l~~~~~~y~~~l~~~~~~~~l~~~V~~ 339 (499)
T 2r60_A 262 LPAIIASSRLDQ--KKNHYGLVEAYVQNKELQDKANLVLTLRGIENPFEDYSRAGQEEKEILGKIIELIDNNDCRGKVSM 339 (499)
T ss_dssp SCEEEECSCCCG--GGCHHHHHHHHHTCHHHHHHCEEEEEESSCSBTTTBCTTSCHHHHHHHHHHHHHHHHTTCBTTEEE
T ss_pred CcEEEEeecCcc--ccCHHHHHHHHHHHHHhCCCceEEEEECCCCCcccccccccccchHHHHHHHHHHHhcCCCceEEE
Confidence 356777888742 333556666666542 22455555421000000011 122221 1 2468999
Q ss_pred EeeccHHH---hhccC----CCCcccc---ccC-CchhhHHHhcCcceeccccccchhhHHHHHHhhhcceeeecCCCCc
Q 011789 346 ITWCCQTS---VLAHP----AIGGFLT---HCG-WNSVLEGLWCGVPLLCFPLYTDQFTNRKLAVDDWNVGLNLSNEKVI 414 (477)
Q Consensus 346 ~~~~p~~~---lL~~~----~~~~~It---HgG-~gs~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~G~~~~~~~~~ 414 (477)
.+++|+.+ ++..+ ++ +|. +-| -.++.||+++|+|+|+.. .......+... +.|..+ +.-
T Consensus 340 ~G~v~~~~~~~~~~~a~~~~dv--~v~pS~~Eg~~~~~lEAma~G~PvI~s~----~~g~~e~v~~~-~~g~l~---~~~ 409 (499)
T 2r60_A 340 FPLNSQQELAGCYAYLASKGSV--FALTSFYEPFGLAPVEAMASGLPAVVTR----NGGPAEILDGG-KYGVLV---DPE 409 (499)
T ss_dssp EECCSHHHHHHHHHHHHHTTCE--EEECCSCBCCCSHHHHHHHTTCCEEEES----SBHHHHHTGGG-TSSEEE---CTT
T ss_pred CCCCCHHHHHHHHHhcCcCCCE--EEECcccCCCCcHHHHHHHcCCCEEEec----CCCHHHHhcCC-ceEEEe---CCC
Confidence 99998764 78888 87 553 224 358999999999999864 44566666666 688888 445
Q ss_pred CHHHHHHHHHHHhcCCch-HHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHhh
Q 011789 415 TKEEVSKNVHLLMGEKSG-AKYRNAAKQVKKAMEYALQPNGSSDKNMDQFIKDLKTRI 471 (477)
Q Consensus 415 ~~~~l~~~i~~~l~~~~~-~~~~~~a~~l~~~~~~~~~~gg~~~~~~~~~~~~~~~~~ 471 (477)
+.+++.++|.++++|++. +.+.+++++..+. .-+.+...+++.+.+.+.+
T Consensus 410 d~~~la~~i~~ll~~~~~~~~~~~~a~~~~~~-------~fs~~~~~~~~~~~y~~~~ 460 (499)
T 2r60_A 410 DPEDIARGLLKAFESEETWSAYQEKGKQRVEE-------RYTWQETARGYLEVIQEIA 460 (499)
T ss_dssp CHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHH-------HSBHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHH-------hCCHHHHHHHHHHHHHHHH
Confidence 899999999999998721 2233333333222 2344455555555555444
No 34
>3beo_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, allosteric, regulation, isomerase; HET: UD1 UDP; 1.70A {Bacillus anthracis} PDB: 1o6c_A
Probab=99.20 E-value=9.3e-10 Score=108.16 Aligned_cols=130 Identities=15% Similarity=0.166 Sum_probs=82.6
Q ss_pred CCcEEEEEecccccCCHHHHHHHHHHHHh-----CCCeEEEEEcCCCCCCCCCCCCchhHHHhcC--CCeEEEeeccHH-
Q 011789 281 KGSVLYVSFGSYAHVSKRDLIEIANGIAK-----SKVTFIWILRPDIVSSDDPNPLPEDFKKEVA--DRSMIITWCCQT- 352 (477)
Q Consensus 281 ~~~~I~vs~Gs~~~~~~~~~~~~~~al~~-----~~~~~i~~~~~~~~~~~~~~~lp~~~~~~~~--~nv~v~~~~p~~- 352 (477)
++++++++.|...... +.+..++++++. .+..+++ +.+.. ..+-+..++... ++|.+.+++++.
T Consensus 204 ~~~~vl~~~gr~~~~~-K~~~~li~a~~~l~~~~~~~~~i~--~~g~~-----~~~~~~~~~~~~~~~~v~~~g~~~~~~ 275 (375)
T 3beo_A 204 NNRLVLMTAHRRENLG-EPMRNMFRAIKRLVDKHEDVQVVY--PVHMN-----PVVRETANDILGDYGRIHLIEPLDVID 275 (375)
T ss_dssp TSEEEEEECCCGGGTT-HHHHHHHHHHHHHHHHCTTEEEEE--ECCSC-----HHHHHHHHHHHTTCTTEEEECCCCHHH
T ss_pred CCCeEEEEecccccch-hHHHHHHHHHHHHHhhCCCeEEEE--eCCCC-----HHHHHHHHHHhhccCCEEEeCCCCHHH
Confidence 4457778888765321 334556666543 2344333 32200 011122222223 689997777654
Q ss_pred --HhhccCCCCccccccCCchhhHHHhcCcceeccccccchhhHHHHHHhhhcceeeecCCCCcCHHHHHHHHHHHhcCC
Q 011789 353 --SVLAHPAIGGFLTHCGWNSVLEGLWCGVPLLCFPLYTDQFTNRKLAVDDWNVGLNLSNEKVITKEEVSKNVHLLMGEK 430 (477)
Q Consensus 353 --~lL~~~~~~~~ItHgG~gs~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~G~~~~~~~~~~~~~l~~~i~~~l~~~ 430 (477)
.+|..+++ ||+..| |.+.||+++|+|+|+.+..... ..+.+. |.|..+ +. +.++|.++|.++++|+
T Consensus 276 ~~~~~~~ad~--~v~~sg-~~~lEA~a~G~Pvi~~~~~~~~----~e~v~~-g~g~~v---~~-d~~~la~~i~~ll~~~ 343 (375)
T 3beo_A 276 FHNVAARSYL--MLTDSG-GVQEEAPSLGVPVLVLRDTTER----PEGIEA-GTLKLA---GT-DEETIFSLADELLSDK 343 (375)
T ss_dssp HHHHHHTCSE--EEECCH-HHHHHHHHHTCCEEECSSCCSC----HHHHHT-TSEEEC---CS-CHHHHHHHHHHHHHCH
T ss_pred HHHHHHhCcE--EEECCC-ChHHHHHhcCCCEEEecCCCCC----ceeecC-CceEEc---CC-CHHHHHHHHHHHHhCh
Confidence 58899998 888763 4588999999999988543332 334567 888888 33 8999999999999987
No 35
>2iuy_A Avigt4, glycosyltransferase; antibiotics, family GT-4, avilamycin A; HET: MES; 2.1A {Streptomyces viridochromogenes} PDB: 2iv3_A*
Probab=99.15 E-value=1.2e-09 Score=105.99 Aligned_cols=125 Identities=14% Similarity=0.133 Sum_probs=85.4
Q ss_pred EEEEecccccCCHHHHHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCchhHHHhcCCCeEEEeeccHH---HhhccCCCC
Q 011789 285 LYVSFGSYAHVSKRDLIEIANGIAKSKVTFIWILRPDIVSSDDPNPLPEDFKKEVADRSMIITWCCQT---SVLAHPAIG 361 (477)
Q Consensus 285 I~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~lp~~~~~~~~~nv~v~~~~p~~---~lL~~~~~~ 361 (477)
+++..|+.. ..+....++++++..+.++++. |.... ...+ ..+.+++.++|.+.+|+|+. +++..+++
T Consensus 164 ~i~~vG~~~--~~Kg~~~li~a~~~~~~~l~i~-G~g~~----~~~l-~~~~~~~~~~v~~~g~~~~~~l~~~~~~adv- 234 (342)
T 2iuy_A 164 FLLFMGRVS--PHKGALEAAAFAHACGRRLVLA-GPAWE----PEYF-DEITRRYGSTVEPIGEVGGERRLDLLASAHA- 234 (342)
T ss_dssp CEEEESCCC--GGGTHHHHHHHHHHHTCCEEEE-SCCCC----HHHH-HHHHHHHTTTEEECCCCCHHHHHHHHHHCSE-
T ss_pred EEEEEeccc--cccCHHHHHHHHHhcCcEEEEE-eCccc----HHHH-HHHHHHhCCCEEEeccCCHHHHHHHHHhCCE-
Confidence 455677765 2334566677777666665544 43210 0011 12333445899999999986 58999998
Q ss_pred ccc--cc-----------cCC-chhhHHHhcCcceeccccccchhhHHHHHHh--hhcceeeecCCCCcCHHHHHHHHHH
Q 011789 362 GFL--TH-----------CGW-NSVLEGLWCGVPLLCFPLYTDQFTNRKLAVD--DWNVGLNLSNEKVITKEEVSKNVHL 425 (477)
Q Consensus 362 ~~I--tH-----------gG~-gs~~eal~~GvP~v~~P~~~DQ~~na~~v~~--~~G~G~~~~~~~~~~~~~l~~~i~~ 425 (477)
+| +. -|+ +++.||+++|+|+|+... ..+...++. . +.|..+ +. +.+++.++|.+
T Consensus 235 -~v~ps~~~~~~~~~~~~E~~~~~~~EAma~G~PvI~s~~----~~~~e~~~~~~~-~~g~~~---~~-d~~~l~~~i~~ 304 (342)
T 2iuy_A 235 -VLAMSQAVTGPWGGIWCEPGATVVSEAAVSGTPVVGTGN----GCLAEIVPSVGE-VVGYGT---DF-APDEARRTLAG 304 (342)
T ss_dssp -EEECCCCCCCTTCSCCCCCCCHHHHHHHHTTCCEEECCT----TTHHHHGGGGEE-ECCSSS---CC-CHHHHHHHHHT
T ss_pred -EEECCcccccccccccccCccHHHHHHHhcCCCEEEcCC----CChHHHhcccCC-CceEEc---CC-CHHHHHHHHHH
Confidence 55 22 344 579999999999998654 567777877 6 678877 46 99999999999
Q ss_pred Hhc
Q 011789 426 LMG 428 (477)
Q Consensus 426 ~l~ 428 (477)
+++
T Consensus 305 l~~ 307 (342)
T 2iuy_A 305 LPA 307 (342)
T ss_dssp SCC
T ss_pred HHH
Confidence 985
No 36
>2iw1_A Lipopolysaccharide core biosynthesis protein RFAG; transferase, lipopolysaccharide biosynthesis, family GT-4, glycosyltransferase, LPS; HET: U2F; 1.5A {Escherichia coli} SCOP: c.87.1.8 PDB: 2iv7_A*
Probab=99.12 E-value=8e-08 Score=94.03 Aligned_cols=128 Identities=14% Similarity=0.262 Sum_probs=89.1
Q ss_pred CcEEEEEecccccCCHHHHHHHHHHHHhCCC----e-EEEEEcCCCCCCCCCCCCchhHH---Hhc--CCCeEEEeeccH
Q 011789 282 GSVLYVSFGSYAHVSKRDLIEIANGIAKSKV----T-FIWILRPDIVSSDDPNPLPEDFK---KEV--ADRSMIITWCCQ 351 (477)
Q Consensus 282 ~~~I~vs~Gs~~~~~~~~~~~~~~al~~~~~----~-~i~~~~~~~~~~~~~~~lp~~~~---~~~--~~nv~v~~~~p~ 351 (477)
+..+++..|+... .+....++++++.... . .++.++.+. .+.++ ++. .+||.+.++..+
T Consensus 195 ~~~~i~~~G~~~~--~K~~~~li~a~~~l~~~~~~~~~l~i~G~g~---------~~~~~~~~~~~~~~~~v~~~g~~~~ 263 (374)
T 2iw1_A 195 QQNLLLQVGSDFG--RKGVDRSIEALASLPESLRHNTLLFVVGQDK---------PRKFEALAEKLGVRSNVHFFSGRND 263 (374)
T ss_dssp TCEEEEEECSCTT--TTTHHHHHHHHHTSCHHHHHTEEEEEESSSC---------CHHHHHHHHHHTCGGGEEEESCCSC
T ss_pred CCeEEEEeccchh--hcCHHHHHHHHHHhHhccCCceEEEEEcCCC---------HHHHHHHHHHcCCCCcEEECCCccc
Confidence 3467778888753 2345556677766532 1 344455431 12222 222 468999988654
Q ss_pred H-HhhccCCCCcccc----ccCCchhhHHHhcCcceeccccccchhhHHHHHHhhhcceeeecCCC-CcCHHHHHHHHHH
Q 011789 352 T-SVLAHPAIGGFLT----HCGWNSVLEGLWCGVPLLCFPLYTDQFTNRKLAVDDWNVGLNLSNEK-VITKEEVSKNVHL 425 (477)
Q Consensus 352 ~-~lL~~~~~~~~It----HgG~gs~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~G~~~~~~~-~~~~~~l~~~i~~ 425 (477)
. .++..+++ +|. -|.-+++.||+++|+|+|+.+. ..+...+++. +.|..+ + ..+.+++.++|.+
T Consensus 264 ~~~~~~~ad~--~v~ps~~e~~~~~~~Ea~a~G~Pvi~~~~----~~~~e~i~~~-~~g~~~---~~~~~~~~l~~~i~~ 333 (374)
T 2iw1_A 264 VSELMAAADL--LLHPAYQEAAGIVLLEAITAGLPVLTTAV----CGYAHYIADA-NCGTVI---AEPFSQEQLNEVLRK 333 (374)
T ss_dssp HHHHHHHCSE--EEECCSCCSSCHHHHHHHHHTCCEEEETT----STTTHHHHHH-TCEEEE---CSSCCHHHHHHHHHH
T ss_pred HHHHHHhcCE--EEeccccCCcccHHHHHHHCCCCEEEecC----CCchhhhccC-CceEEe---CCCCCHHHHHHHHHH
Confidence 4 58999998 664 4566789999999999999654 4567778888 899999 5 5689999999999
Q ss_pred HhcCC
Q 011789 426 LMGEK 430 (477)
Q Consensus 426 ~l~~~ 430 (477)
+++|+
T Consensus 334 l~~~~ 338 (374)
T 2iw1_A 334 ALTQS 338 (374)
T ss_dssp HHHCH
T ss_pred HHcCh
Confidence 99987
No 37
>2jjm_A Glycosyl transferase, group 1 family protein; anthrax, nucleotide, carbohydrate; 3.10A {Bacillus anthracis} PDB: 3mbo_A*
Probab=99.11 E-value=2.5e-08 Score=98.69 Aligned_cols=116 Identities=16% Similarity=0.178 Sum_probs=76.5
Q ss_pred CCeEEEeeccHH-HhhccCCCCccc----cccCCchhhHHHhcCcceeccccccchhhHHHHHHhhhcceeeecCCCCcC
Q 011789 341 DRSMIITWCCQT-SVLAHPAIGGFL----THCGWNSVLEGLWCGVPLLCFPLYTDQFTNRKLAVDDWNVGLNLSNEKVIT 415 (477)
Q Consensus 341 ~nv~v~~~~p~~-~lL~~~~~~~~I----tHgG~gs~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~G~~~~~~~~~~ 415 (477)
++|.+.++..+. .++..+++ +| .-|.-+++.||+++|+|+|+.+. ......+++. +.|..+ +.-+
T Consensus 267 ~~v~~~g~~~~~~~~~~~adv--~v~ps~~e~~~~~~~EAma~G~PvI~~~~----~~~~e~v~~~-~~g~~~---~~~d 336 (394)
T 2jjm_A 267 DRVLFLGKQDNVAELLAMSDL--MLLLSEKESFGLVLLEAMACGVPCIGTRV----GGIPEVIQHG-DTGYLC---EVGD 336 (394)
T ss_dssp GGBCCCBSCSCTHHHHHTCSE--EEECCSCCSCCHHHHHHHHTTCCEEEECC----TTSTTTCCBT-TTEEEE---CTTC
T ss_pred CeEEEeCchhhHHHHHHhCCE--EEeccccCCCchHHHHHHhcCCCEEEecC----CChHHHhhcC-CceEEe---CCCC
Confidence 578888775443 58999998 66 44556789999999999999764 3344445555 678888 4458
Q ss_pred HHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHhhh
Q 011789 416 KEEVSKNVHLLMGEKSGAKYRNAAKQVKKAMEYALQPNGSSDKNMDQFIKDLKTRIQ 472 (477)
Q Consensus 416 ~~~l~~~i~~~l~~~~~~~~~~~a~~l~~~~~~~~~~gg~~~~~~~~~~~~~~~~~~ 472 (477)
.+++.++|.++++|+ +.+++..+-+.+... ..-+.+...+++.+.+++.+.
T Consensus 337 ~~~la~~i~~l~~~~---~~~~~~~~~~~~~~~---~~~s~~~~~~~~~~~~~~~~~ 387 (394)
T 2jjm_A 337 TTGVADQAIQLLKDE---ELHRNMGERARESVY---EQFRSEKIVSQYETIYYDVLR 387 (394)
T ss_dssp HHHHHHHHHHHHHCH---HHHHHHHHHHHHHHH---HHSCHHHHHHHHHHHHHHTC-
T ss_pred HHHHHHHHHHHHcCH---HHHHHHHHHHHHHHH---HhCCHHHHHHHHHHHHHHHHh
Confidence 899999999999987 433332222222221 123445666666666665554
No 38
>4hwg_A UDP-N-acetylglucosamine 2-epimerase; ssgcid, structural genomics, seattle structural genomics center for infectious disease, isomerase; 2.00A {Rickettsia bellii}
Probab=99.04 E-value=3.7e-09 Score=104.22 Aligned_cols=322 Identities=13% Similarity=0.083 Sum_probs=172.8
Q ss_pred CCCCC-CCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCcchh-hhcc-CCCCCCccccccccCCCCCeEEEe
Q 011789 1 MAGNK-TQKPHAIFISYPLQGHVNPSVQLALKLASQGFTITFVNTHFIHQ-QMTK-ASPEMGSDIFAGVRKSGLDIRYMT 77 (477)
Q Consensus 1 ~~~~~-~~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~-~~~~-g~~~~~~~~~~~~~~~~~~~~~~~ 77 (477)
||+-. +.|.|++++ .|++-.+.-+.+|.++|.++ +++.++.+....+ .+.. ..+ ++.+.
T Consensus 1 ~~~~~~~~~~~~~~v-~GtRpe~~k~~p~~~~l~~~-~~~~~~~tgqh~~~~~~~~~~~---------------~~~i~- 62 (385)
T 4hwg_A 1 MAHHHHHHMLKVMTI-VGTRPELIKLCCVISEFDKH-TKHILVHTGQNYAYELNQVFFD---------------DMGIR- 62 (385)
T ss_dssp -------CCCEEEEE-ECSHHHHHHHHHHHHHHHHH-SEEEEEECSCHHHHHHTHHHHC----------------CCCC-
T ss_pred CCccchhhhhheeEE-EEcCHhHHHHHHHHHHHHhc-CCEEEEEeCCCCChhHHHHHHh---------------hCCCC-
Confidence 45444 677787765 57888888888899999887 9988888877655 2222 101 22221
Q ss_pred cCCCCCCCCCCCCcHHHHHHHHHHHhHHHHHHHHHHhHhcCCCccEEEec--CCCcchHHHHHHhCCceEEEecchhHHH
Q 011789 78 LSDGLPLGFDRSLNHEQFMSSLLHVFSAHAEEVIGQIVRSGENVHCLIAD--TYFVWPSKLAKKFGLYYISFWTESALVF 155 (477)
Q Consensus 78 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~pD~iI~D--~~~~~~~~~A~~~gIP~v~~~~~~~~~~ 155 (477)
-|+ +..+.. ..+..... ......+.+++++. +||+|++- ....++..+|.++|||++-+..
T Consensus 63 ~~~-~~l~~~-~~~~~~~~----~~~~~~l~~~l~~~-----kPD~Vlv~gd~~~~~aalaA~~~~IPv~h~ea------ 125 (385)
T 4hwg_A 63 KPD-YFLEVA-ADNTAKSI----GLVIEKVDEVLEKE-----KPDAVLFYGDTNSCLSAIAAKRRKIPIFHMEA------ 125 (385)
T ss_dssp CCS-EECCCC-CCCSHHHH----HHHHHHHHHHHHHH-----CCSEEEEESCSGGGGGHHHHHHTTCCEEEESC------
T ss_pred CCc-eecCCC-CCCHHHHH----HHHHHHHHHHHHhc-----CCcEEEEECCchHHHHHHHHHHhCCCEEEEeC------
Confidence 111 011111 12222222 22344456666665 99999863 3334557889999999765410
Q ss_pred HHHhhhhhhhhcCCcCCCCCCCCcccccCCCCCCCCCCCccccccCCCchhHHHHHHHHhhhccCCcEEEEcchhhccHH
Q 011789 156 TLYYHLDLLTINGHFQCYDCREDTIDYIPGVKAINPKDTTSYLQETDTTSACHQIIFNSFQDTRNADYVLCNTVHELESE 235 (477)
Q Consensus 156 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~l~~~ 235 (477)
++ +..+. .......+.+. . ..++.+++.+...-+.
T Consensus 126 -----------------------------gl---rs~~~-------~~pee~nR~~~---~--~~a~~~~~~te~~~~~- 160 (385)
T 4hwg_A 126 -----------------------------GN---RCFDQ-------RVPEEINRKII---D--HISDVNITLTEHARRY- 160 (385)
T ss_dssp -----------------------------CC---CCSCT-------TSTHHHHHHHH---H--HHCSEEEESSHHHHHH-
T ss_pred -----------------------------CC---ccccc-------cCcHHHHHHHH---H--hhhceeecCCHHHHHH-
Confidence 00 00000 00011112111 1 2355666655432221
Q ss_pred HHHHHHccC-C--EEEeCccCCCCCCccccccccCCccccchhhccCCCCcEEEEEecccccCC-HHHHHHHHHHHHhC-
Q 011789 236 AVTALKAKI-P--FITMGPISLNKFSDRVVATSLWSESDCSQWLDKQPKGSVLYVSFGSYAHVS-KRDLIEIANGIAKS- 310 (477)
Q Consensus 236 ~~~~~~~~~-p--~~~vGp~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~I~vs~Gs~~~~~-~~~~~~~~~al~~~- 310 (477)
+.+... + ++.+|....+...... . ....+++.+.++-. +++.|+++.|...+.. .+.+..+++++...
T Consensus 161 ---l~~~G~~~~~I~vtGnp~~D~~~~~~-~--~~~~~~~~~~lgl~-~~~~iLvt~hr~e~~~~~~~l~~ll~al~~l~ 233 (385)
T 4hwg_A 161 ---LIAEGLPAELTFKSGSHMPEVLDRFM-P--KILKSDILDKLSLT-PKQYFLISSHREENVDVKNNLKELLNSLQMLI 233 (385)
T ss_dssp ---HHHTTCCGGGEEECCCSHHHHHHHHH-H--HHHHCCHHHHTTCC-TTSEEEEEECCC-----CHHHHHHHHHHHHHH
T ss_pred ---HHHcCCCcCcEEEECCchHHHHHHhh-h--hcchhHHHHHcCCC-cCCEEEEEeCCchhcCcHHHHHHHHHHHHHHH
Confidence 112223 3 7888854332110000 0 00002333334332 2468889888754332 24455666666542
Q ss_pred ---CCeEEEEEcCCCCCCCCCCCCchhHHHh---c--CCCeEEEeecc---HHHhhccCCCCccccccCCchhhHHHhcC
Q 011789 311 ---KVTFIWILRPDIVSSDDPNPLPEDFKKE---V--ADRSMIITWCC---QTSVLAHPAIGGFLTHCGWNSVLEGLWCG 379 (477)
Q Consensus 311 ---~~~~i~~~~~~~~~~~~~~~lp~~~~~~---~--~~nv~v~~~~p---~~~lL~~~~~~~~ItHgG~gs~~eal~~G 379 (477)
+..+|+..... +.+..++. . .+|+++.+.++ ...+++++++ +|+-.|. .+.||.++|
T Consensus 234 ~~~~~~vv~p~~p~---------~~~~l~~~~~~~~~~~~v~l~~~lg~~~~~~l~~~adl--vvt~SGg-v~~EA~alG 301 (385)
T 4hwg_A 234 KEYNFLIIFSTHPR---------TKKRLEDLEGFKELGDKIRFLPAFSFTDYVKLQMNAFC--ILSDSGT-ITEEASILN 301 (385)
T ss_dssp HHHCCEEEEEECHH---------HHHHHHTSGGGGGTGGGEEECCCCCHHHHHHHHHHCSE--EEECCTT-HHHHHHHTT
T ss_pred hcCCeEEEEECChH---------HHHHHHHHHHHhcCCCCEEEEcCCCHHHHHHHHHhCcE--EEECCcc-HHHHHHHcC
Confidence 56677654321 11111111 1 25788876554 4569999998 9988775 468999999
Q ss_pred cceeccccccchhhHHHHHHhhhcceeeecCCCCcCHHHHHHHHHHHhcCC
Q 011789 380 VPLLCFPLYTDQFTNRKLAVDDWNVGLNLSNEKVITKEEVSKNVHLLMGEK 430 (477)
Q Consensus 380 vP~v~~P~~~DQ~~na~~v~~~~G~G~~~~~~~~~~~~~l~~~i~~~l~~~ 430 (477)
+|+|+++-..+.+. ..+. |.++.+ ..+.++|.+++.++|+|+
T Consensus 302 ~Pvv~~~~~ter~e----~v~~-G~~~lv----~~d~~~i~~ai~~ll~d~ 343 (385)
T 4hwg_A 302 LPALNIREAHERPE----GMDA-GTLIMS----GFKAERVLQAVKTITEEH 343 (385)
T ss_dssp CCEEECSSSCSCTH----HHHH-TCCEEC----CSSHHHHHHHHHHHHTTC
T ss_pred CCEEEcCCCccchh----hhhc-CceEEc----CCCHHHHHHHHHHHHhCh
Confidence 99999987554222 3567 877776 348999999999999987
No 39
>2x6q_A Trehalose-synthase TRET; biosynthetic protein; 2.20A {Pyrococcus horikoshii} PDB: 2x6r_A 2xa1_A 2xa2_A* 2xa9_A* 2xmp_A*
Probab=98.94 E-value=1.4e-07 Score=94.01 Aligned_cols=112 Identities=16% Similarity=0.152 Sum_probs=75.1
Q ss_pred CCCeEEEeecc---HH---HhhccCCCCcccccc----CCchhhHHHhcCcceeccccccchhhHHHHHHhhhcceeeec
Q 011789 340 ADRSMIITWCC---QT---SVLAHPAIGGFLTHC----GWNSVLEGLWCGVPLLCFPLYTDQFTNRKLAVDDWNVGLNLS 409 (477)
Q Consensus 340 ~~nv~v~~~~p---~~---~lL~~~~~~~~ItHg----G~gs~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~G~~~~ 409 (477)
.++|.+.+|++ +. .++..+++ +|.-. .-+++.||+++|+|+|+.+ ...+...++.. +.|..+
T Consensus 292 ~~~V~~~G~~~~~~~~~~~~~~~~ad~--~v~ps~~E~~~~~~lEAma~G~PvI~~~----~~g~~e~i~~~-~~g~l~- 363 (416)
T 2x6q_A 292 DYDVKVLTNLIGVHAREVNAFQRASDV--ILQMSIREGFGLTVTEAMWKGKPVIGRA----VGGIKFQIVDG-ETGFLV- 363 (416)
T ss_dssp CTTEEEEEGGGTCCHHHHHHHHHHCSE--EEECCSSCSSCHHHHHHHHTTCCEEEES----CHHHHHHCCBT-TTEEEE-
T ss_pred CCcEEEecccCCCCHHHHHHHHHhCCE--EEECCCcCCCccHHHHHHHcCCCEEEcc----CCCChhheecC-CCeEEE-
Confidence 46899999876 22 48888887 66433 3468999999999999965 35667777777 788888
Q ss_pred CCCCcCHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHH
Q 011789 410 NEKVITKEEVSKNVHLLMGEKSGAKYRNAAKQVKKAMEYALQPNGSSDKNMDQFIKDLKT 469 (477)
Q Consensus 410 ~~~~~~~~~l~~~i~~~l~~~~~~~~~~~a~~l~~~~~~~~~~gg~~~~~~~~~~~~~~~ 469 (477)
+ +.+++.++|.++++|+ +.+++..+-+.+... +.-+.+...+++.+.+.+
T Consensus 364 --~--d~~~la~~i~~ll~~~---~~~~~~~~~a~~~~~---~~fs~~~~~~~~~~~~~~ 413 (416)
T 2x6q_A 364 --R--DANEAVEVVLYLLKHP---EVSKEMGAKAKERVR---KNFIITKHMERYLDILNS 413 (416)
T ss_dssp --S--SHHHHHHHHHHHHHCH---HHHHHHHHHHHHHHH---HHTBHHHHHHHHHHHHHT
T ss_pred --C--CHHHHHHHHHHHHhCH---HHHHHHHHHHHHHHH---HHcCHHHHHHHHHHHHHH
Confidence 3 8899999999999987 443332222222211 122444555555555543
No 40
>3oy2_A Glycosyltransferase B736L; rossmann fold, GDP-mannose, sugar, VIRU proteins, viral protein,transferase; 2.31A {Paramecium bursaria chlorella virus NY} PDB: 3oy7_A*
Probab=98.74 E-value=9.5e-07 Score=87.76 Aligned_cols=113 Identities=12% Similarity=0.090 Sum_probs=73.3
Q ss_pred eEEEeeccHHH---hhccCCCCcccc----ccCCchhhHHHhcCcceeccccccchhhHHHHHHhhhcc-----------
Q 011789 343 SMIITWCCQTS---VLAHPAIGGFLT----HCGWNSVLEGLWCGVPLLCFPLYTDQFTNRKLAVDDWNV----------- 404 (477)
Q Consensus 343 v~v~~~~p~~~---lL~~~~~~~~It----HgG~gs~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~----------- 404 (477)
+.+.+|+|+.+ ++..+++ +|. -|.-.++.||+++|+|+|+.. .......+.+. ..
T Consensus 256 v~~~g~~~~~~~~~~~~~adv--~v~pS~~E~~~~~~lEAma~G~PvI~s~----~~g~~e~v~~~-~~~~i~~~~~~~~ 328 (413)
T 3oy2_A 256 MINRTVLTDERVDMMYNACDV--IVNCSSGEGFGLCSAEGAVLGKPLIISA----VGGADDYFSGD-CVYKIKPSAWISV 328 (413)
T ss_dssp EEECSCCCHHHHHHHHHHCSE--EEECCSCCSSCHHHHHHHTTTCCEEEEC----CHHHHHHSCTT-TSEEECCCEEEEC
T ss_pred eeccCcCCHHHHHHHHHhCCE--EEeCCCcCCCCcHHHHHHHcCCCEEEcC----CCChHHHHccC-ccccccccccccc
Confidence 66668998654 7888998 553 223358999999999999854 44555555443 32
Q ss_pred ----ee--eecCCCCcCHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHhhh
Q 011789 405 ----GL--NLSNEKVITKEEVSKNVHLLMGEKSGAKYRNAAKQVKKAMEYALQPNGSSDKNMDQFIKDLKTRIQ 472 (477)
Q Consensus 405 ----G~--~~~~~~~~~~~~l~~~i~~~l~~~~~~~~~~~a~~l~~~~~~~~~~gg~~~~~~~~~~~~~~~~~~ 472 (477)
|. .+ ..-+.+++.++| ++++|+ +.+++..+-+.+.. ...-+-+...+++.+.+++.+.
T Consensus 329 ~~~~G~~gl~---~~~d~~~la~~i-~l~~~~---~~~~~~~~~a~~~~---~~~fs~~~~~~~~~~~~~~~~~ 392 (413)
T 3oy2_A 329 DDRDGIGGIE---GIIDVDDLVEAF-TFFKDE---KNRKEYGKRVQDFV---KTKPTWDDISSDIIDFFNSLLR 392 (413)
T ss_dssp TTTCSSCCEE---EECCHHHHHHHH-HHTTSH---HHHHHHHHHHHHHH---TTSCCHHHHHHHHHHHHHHHTC
T ss_pred ccccCcceee---CCCCHHHHHHHH-HHhcCH---HHHHHHHHHHHHHH---HHhCCHHHHHHHHHHHHHHHHh
Confidence 66 55 345899999999 999988 55444333333332 2244556666666666665543
No 41
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=98.73 E-value=2.5e-05 Score=81.00 Aligned_cols=123 Identities=14% Similarity=0.083 Sum_probs=85.9
Q ss_pred CCeEEEeeccHH---HhhccCCCCccc--c-ccCCchhhHHHhcCcceeccccc---cchhhHHHHHHhhhcceeeecCC
Q 011789 341 DRSMIITWCCQT---SVLAHPAIGGFL--T-HCGWNSVLEGLWCGVPLLCFPLY---TDQFTNRKLAVDDWNVGLNLSNE 411 (477)
Q Consensus 341 ~nv~v~~~~p~~---~lL~~~~~~~~I--t-HgG~gs~~eal~~GvP~v~~P~~---~DQ~~na~~v~~~~G~G~~~~~~ 411 (477)
++|.+.+++|+. .++..+++ || + .|+-+++.||+++|+|+|++|-. .|. -+..+... |+...+
T Consensus 434 ~~v~~~g~~~~~~~~~~~~~adv--~v~ps~~~~g~~~lEAma~G~Pvv~~~g~~~~s~~--~~~~l~~~-g~~e~v--- 505 (568)
T 2vsy_A 434 QRLVFMPKLPHPQYLARYRHADL--FLDTHPYNAHTTASDALWTGCPVLTTPGETFAARV--AGSLNHHL-GLDEMN--- 505 (568)
T ss_dssp GGEEEECCCCHHHHHHHGGGCSE--EECCSSSCCSHHHHHHHHTTCCEEBCCCSSGGGSH--HHHHHHHH-TCGGGB---
T ss_pred hHEEeeCCCCHHHHHHHHhcCCE--EeeCCCCCCcHHHHHHHhCCCCEEeccCCCchHHH--HHHHHHHC-CChhhh---
Confidence 689999999854 47888998 65 2 26667899999999999997743 222 24556667 777666
Q ss_pred CCcCHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHhhhhhcc
Q 011789 412 KVITKEEVSKNVHLLMGEKSGAKYRNAAKQVKKAMEYALQPNGSSDKNMDQFIKDLKTRIQSKCD 476 (477)
Q Consensus 412 ~~~~~~~l~~~i~~~l~~~~~~~~~~~a~~l~~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~ 476 (477)
. -+.+++.+++.++++|+ +.+++..+-+.+... ..+.-+.+...+++.+.+++.++..|.
T Consensus 506 ~-~~~~~la~~i~~l~~~~---~~~~~~~~~~~~~~~-~~~~f~~~~~~~~~~~~y~~~~~~~~~ 565 (568)
T 2vsy_A 506 V-ADDAAFVAKAVALASDP---AALTALHARVDVLRR-ASGVFHMDGFADDFGALLQALARRHGW 565 (568)
T ss_dssp C-SSHHHHHHHHHHHHHCH---HHHHHHHHHHHHHHH-HSSTTCHHHHHHHHHHHHHHHHHTTTC
T ss_pred c-CCHHHHHHHHHHHhcCH---HHHHHHHHHHHHhhh-cCCCCCHHHHHHHHHHHHHHHHHHHHh
Confidence 2 38899999999999988 554433322222220 024566677788888888887777775
No 42
>3s28_A Sucrose synthase 1; glycosyltransferase, sucrose metabolism, sugar donar complex rossmann fold, GT-B fold, glycosyltansferase, UDP-glucose; HET: UDP LCN NHF; 2.80A {Arabidopsis thaliana} PDB: 3s27_A* 3s29_A*
Probab=98.70 E-value=2.8e-06 Score=90.96 Aligned_cols=113 Identities=8% Similarity=0.065 Sum_probs=72.4
Q ss_pred CCCeEEEe----eccHHHhhc----cCCCCccccc----cCCchhhHHHhcCcceeccccccchhhHHHHHHhhhcceee
Q 011789 340 ADRSMIIT----WCCQTSVLA----HPAIGGFLTH----CGWNSVLEGLWCGVPLLCFPLYTDQFTNRKLAVDDWNVGLN 407 (477)
Q Consensus 340 ~~nv~v~~----~~p~~~lL~----~~~~~~~ItH----gG~gs~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~G~~ 407 (477)
.++|.+.+ ++|+.++.. .+++ ||.- |--.++.||+++|+|+|+. |.......+... +.|..
T Consensus 639 ~~~V~flG~~~~~v~~~eL~~~~~~aaDv--fV~PS~~EgfglvllEAMA~G~PVIas----d~GG~~EiV~dg-~~Gll 711 (816)
T 3s28_A 639 NGQFRWISSQMDRVRNGELYRYICDTKGA--FVQPALYEAFGLTVVEAMTCGLPTFAT----CKGGPAEIIVHG-KSGFH 711 (816)
T ss_dssp BBBEEEECCCCCHHHHHHHHHHHHHTTCE--EEECCSCBSSCHHHHHHHHTTCCEEEE----SSBTHHHHCCBT-TTBEE
T ss_pred CCcEEEccCccccCCHHHHHHHHHhcCeE--EEECCCccCccHHHHHHHHcCCCEEEe----CCCChHHHHccC-CcEEE
Confidence 36888887 445555443 4566 6532 3346899999999999984 566677777777 78988
Q ss_pred ecCCCCcCHHHHHHHHHHHh----cCCchHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHH
Q 011789 408 LSNEKVITKEEVSKNVHLLM----GEKSGAKYRNAAKQVKKAMEYALQPNGSSDKNMDQFIKDLK 468 (477)
Q Consensus 408 ~~~~~~~~~~~l~~~i~~~l----~~~~~~~~~~~a~~l~~~~~~~~~~gg~~~~~~~~~~~~~~ 468 (477)
+ +.-+.+++.++|.+++ +|+ +.+++..+-+.+... ..-+-+...+++++..+
T Consensus 712 v---~p~D~e~LA~aI~~lL~~Ll~d~---~~~~~m~~~ar~~a~---~~fSwe~~a~~ll~lY~ 767 (816)
T 3s28_A 712 I---DPYHGDQAADTLADFFTKCKEDP---SHWDEISKGGLQRIE---EKYTWQIYSQRLLTLTG 767 (816)
T ss_dssp E---CTTSHHHHHHHHHHHHHHHHHCT---HHHHHHHHHHHHHHH---HSCCHHHHHHHHHHHHH
T ss_pred e---CCCCHHHHHHHHHHHHHHhccCH---HHHHHHHHHHHHHHH---HhCCHHHHHHHHHHHHH
Confidence 8 5558899999997766 787 544443333333221 13444455555555444
No 43
>1rzu_A Glycogen synthase 1; glycosyl-transferase, GT-B fold, rossmann fold, ADP-binding, transferase; HET: ADP; 2.30A {Agrobacterium tumefaciens} SCOP: c.87.1.8 PDB: 1rzv_A
Probab=98.58 E-value=1.3e-05 Score=81.41 Aligned_cols=162 Identities=11% Similarity=0.023 Sum_probs=91.5
Q ss_pred EEEEEecccccCC-HHHHHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCchh---HHHhcCCCeE-EEeeccHH---Hhh
Q 011789 284 VLYVSFGSYAHVS-KRDLIEIANGIAKSKVTFIWILRPDIVSSDDPNPLPED---FKKEVADRSM-IITWCCQT---SVL 355 (477)
Q Consensus 284 ~I~vs~Gs~~~~~-~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~lp~~---~~~~~~~nv~-v~~~~p~~---~lL 355 (477)
.+++..|.+.... ...+-..+..+.+.+.+++++ |.+. ...-+. +.++.+++|. +.++ ++. .++
T Consensus 292 ~~i~~vGrl~~~Kg~~~li~a~~~l~~~~~~l~iv-G~g~------~~~~~~l~~~~~~~~~~v~~~~g~-~~~~~~~~~ 363 (485)
T 1rzu_A 292 PLFCVISRLTWQKGIDLMAEAVDEIVSLGGRLVVL-GAGD------VALEGALLAAASRHHGRVGVAIGY-NEPLSHLMQ 363 (485)
T ss_dssp CEEEEESCBSTTTTHHHHHTTHHHHHHTTCEEEEE-ECBC------HHHHHHHHHHHHHTTTTEEEEESC-CHHHHHHHH
T ss_pred eEEEEEccCccccCHHHHHHHHHHHHhcCceEEEE-eCCc------hHHHHHHHHHHHhCCCcEEEecCC-CHHHHHHHH
Confidence 4778888875322 222323333333345665554 3220 001122 2233456887 5677 443 478
Q ss_pred ccCCCCcccc----ccCCchhhHHHhcCcceeccccccchhhHHHHHHhh--------hcceeeecCCCCcCHHHHHHHH
Q 011789 356 AHPAIGGFLT----HCGWNSVLEGLWCGVPLLCFPLYTDQFTNRKLAVDD--------WNVGLNLSNEKVITKEEVSKNV 423 (477)
Q Consensus 356 ~~~~~~~~It----HgG~gs~~eal~~GvP~v~~P~~~DQ~~na~~v~~~--------~G~G~~~~~~~~~~~~~l~~~i 423 (477)
..+++ +|. -|.-.++.||+++|+|+|+... ......+... -+.|..+ +.-+.++|.++|
T Consensus 364 ~~adv--~v~pS~~E~~~~~~lEAma~G~PvI~s~~----gg~~e~v~~~~~~~~~~~~~~G~l~---~~~d~~~la~~i 434 (485)
T 1rzu_A 364 AGCDA--IIIPSRFEPCGLTQLYALRYGCIPVVART----GGLADTVIDANHAALASKAATGVQF---SPVTLDGLKQAI 434 (485)
T ss_dssp HHCSE--EEECCSCCSSCSHHHHHHHHTCEEEEESS----HHHHHHCCBCCHHHHHTTCCCBEEE---SSCSHHHHHHHH
T ss_pred hcCCE--EEECcccCCCCHHHHHHHHCCCCEEEeCC----CChhheecccccccccccCCcceEe---CCCCHHHHHHHH
Confidence 99998 652 2334689999999999999654 3444434320 0267777 445889999999
Q ss_pred HHHh---cCCchHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHhh
Q 011789 424 HLLM---GEKSGAKYRNAAKQVKKAMEYALQPNGSSDKNMDQFIKDLKTRI 471 (477)
Q Consensus 424 ~~~l---~~~~~~~~~~~a~~l~~~~~~~~~~gg~~~~~~~~~~~~~~~~~ 471 (477)
.+++ +|+ +.+++.. +..++ ..-+-+...+++.+.+++.+
T Consensus 435 ~~ll~~~~~~---~~~~~~~---~~~~~---~~fs~~~~~~~~~~~y~~~~ 476 (485)
T 1rzu_A 435 RRTVRYYHDP---KLWTQMQ---KLGMK---SDVSWEKSAGLYAALYSQLI 476 (485)
T ss_dssp HHHHHHHTCH---HHHHHHH---HHHHT---CCCBHHHHHHHHHHHHHHHT
T ss_pred HHHHHHhCCH---HHHHHHH---HHHHH---HhCChHHHHHHHHHHHHHhh
Confidence 9999 676 4443322 22221 24555556666666665443
No 44
>2qzs_A Glycogen synthase; glycosyl-transferase, GT-B fold, rossmann fold, closed-form, ADP and glucose binding, glycogen biosynthesis; HET: GLC ADP 250; 2.20A {Escherichia coli} PDB: 2r4t_A* 2r4u_A* 3guh_A* 3cx4_A* 3cop_A* 3d1j_A
Probab=98.55 E-value=3.7e-05 Score=77.94 Aligned_cols=162 Identities=10% Similarity=-0.013 Sum_probs=91.1
Q ss_pred cEEEEEecccccCCHHHHHHHHHHHH---hCCCeEEEEEcCCCCCCCCCCCCchh---HHHhcCCCeE-EEeeccHH--H
Q 011789 283 SVLYVSFGSYAHVSKRDLIEIANGIA---KSKVTFIWILRPDIVSSDDPNPLPED---FKKEVADRSM-IITWCCQT--S 353 (477)
Q Consensus 283 ~~I~vs~Gs~~~~~~~~~~~~~~al~---~~~~~~i~~~~~~~~~~~~~~~lp~~---~~~~~~~nv~-v~~~~p~~--~ 353 (477)
..+++..|.+.. .+.+..++++++ +.+.+++++-.+. ....+. +.++.+++|. +.++.... .
T Consensus 292 ~~~i~~vGrl~~--~Kg~~~li~a~~~l~~~~~~l~ivG~g~-------~~~~~~l~~~~~~~~~~v~~~~g~~~~~~~~ 362 (485)
T 2qzs_A 292 VPLFAVVSRLTS--QKGLDLVLEALPGLLEQGGQLALLGAGD-------PVLQEGFLAAAAEYPGQVGVQIGYHEAFSHR 362 (485)
T ss_dssp SCEEEEEEEESG--GGCHHHHHHHHHHHHHTTCEEEEEEEEC-------HHHHHHHHHHHHHSTTTEEEEESCCHHHHHH
T ss_pred CeEEEEeccCcc--ccCHHHHHHHHHHHhhCCcEEEEEeCCc-------hHHHHHHHHHHHhCCCcEEEeCCCCHHHHHH
Confidence 456677787642 222333444433 3456655543221 001122 2233456886 66773332 5
Q ss_pred hhccCCCCccccc----cCCchhhHHHhcCcceeccccccchhhHHHHHHhhh--------cceeeecCCCCcCHHHHHH
Q 011789 354 VLAHPAIGGFLTH----CGWNSVLEGLWCGVPLLCFPLYTDQFTNRKLAVDDW--------NVGLNLSNEKVITKEEVSK 421 (477)
Q Consensus 354 lL~~~~~~~~ItH----gG~gs~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~--------G~G~~~~~~~~~~~~~l~~ 421 (477)
++..+++ +|.- |.-.++.||+++|+|+|+... ..+...+.... +.|..+ +.-+.++|.+
T Consensus 363 ~~~~adv--~v~pS~~E~~g~~~lEAma~G~PvI~s~~----gg~~e~v~~~~~~~~~~~~~~G~l~---~~~d~~~la~ 433 (485)
T 2qzs_A 363 IMGGADV--ILVPSRFEPCGLTQLYGLKYGTLPLVRRT----GGLADTVSDCSLENLADGVASGFVF---EDSNAWSLLR 433 (485)
T ss_dssp HHHHCSE--EEECCSCCSSCSHHHHHHHHTCEEEEESS----HHHHHHCCBCCHHHHHTTCCCBEEE---CSSSHHHHHH
T ss_pred HHHhCCE--EEECCccCCCcHHHHHHHHCCCCEEECCC----CCccceeccCccccccccccceEEE---CCCCHHHHHH
Confidence 7899998 5522 334678899999999998653 34444443210 267777 4458999999
Q ss_pred HHHHHh---cCCchHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHhh
Q 011789 422 NVHLLM---GEKSGAKYRNAAKQVKKAMEYALQPNGSSDKNMDQFIKDLKTRI 471 (477)
Q Consensus 422 ~i~~~l---~~~~~~~~~~~a~~l~~~~~~~~~~gg~~~~~~~~~~~~~~~~~ 471 (477)
+|.+++ +|+ +.+++.. +..+. ..-+-+...+++.+.+.+.+
T Consensus 434 ~i~~ll~~~~~~---~~~~~~~---~~~~~---~~fs~~~~~~~~~~ly~~~~ 477 (485)
T 2qzs_A 434 AIRRAFVLWSRP---SLWRFVQ---RQAMA---MDFSWQVAAKSYRELYYRLK 477 (485)
T ss_dssp HHHHHHHHHTSH---HHHHHHH---HHHHH---CCCCHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHcCCH---HHHHHHH---HHHHh---hcCCHHHHHHHHHHHHHHhh
Confidence 999999 676 4443322 22222 24555556666666665443
No 45
>2hy7_A Glucuronosyltransferase GUMK; glycosyltransferases, xanthan, membrane-associated proteins; 1.90A {Xanthomonas campestris} PDB: 2q6v_A* 3cv3_A* 3cuy_A*
Probab=98.55 E-value=3.4e-06 Score=83.74 Aligned_cols=75 Identities=9% Similarity=0.083 Sum_probs=59.4
Q ss_pred CCCeEEEeeccHHH---hhccCCCCcccc---ccCC-chhhHHH-------hcCcceeccccccchhhHHHHHHhhhcce
Q 011789 340 ADRSMIITWCCQTS---VLAHPAIGGFLT---HCGW-NSVLEGL-------WCGVPLLCFPLYTDQFTNRKLAVDDWNVG 405 (477)
Q Consensus 340 ~~nv~v~~~~p~~~---lL~~~~~~~~It---HgG~-gs~~eal-------~~GvP~v~~P~~~DQ~~na~~v~~~~G~G 405 (477)
.+||.+.+++|+.+ ++..+++ +|. +-|+ +++.||+ ++|+|+|+... +... ..|
T Consensus 264 ~~~V~f~G~~~~~~l~~~~~~adv--~v~ps~~E~~~~~~lEAm~Kl~eYla~G~PVIas~~----------v~~~-~~G 330 (406)
T 2hy7_A 264 GDNVIVYGEMKHAQTIGYIKHARF--GIAPYASEQVPVYLADSSMKLLQYDFFGLPAVCPNA----------VVGP-YKS 330 (406)
T ss_dssp CTTEEEECCCCHHHHHHHHHTCSE--EECCBSCSCCCTTHHHHCHHHHHHHHHTCCEEEEGG----------GTCS-CSS
T ss_pred CCCEEEcCCCCHHHHHHHHHhcCE--EEECCCcccCchHHHHHHHHHHHHhhCCCcEEEehh----------cccC-cce
Confidence 46899999998764 7889998 543 3444 5688999 99999999754 5555 668
Q ss_pred ee-ecCCCCcCHHHHHHHHHHHhcCC
Q 011789 406 LN-LSNEKVITKEEVSKNVHLLMGEK 430 (477)
Q Consensus 406 ~~-~~~~~~~~~~~l~~~i~~~l~~~ 430 (477)
.. + +.-+.++|.++|.++++|+
T Consensus 331 ~l~v---~~~d~~~la~ai~~ll~~~ 353 (406)
T 2hy7_A 331 RFGY---TPGNADSVIAAITQALEAP 353 (406)
T ss_dssp EEEE---CTTCHHHHHHHHHHHHHCC
T ss_pred EEEe---CCCCHHHHHHHHHHHHhCc
Confidence 87 7 4458999999999999988
No 46
>2f9f_A First mannosyl transferase (WBAZ-1); alpha-beta protein, structural genomics, PSI, protein struct initiative; 1.80A {Archaeoglobus fulgidus} SCOP: c.87.1.8
Probab=98.50 E-value=3e-07 Score=80.07 Aligned_cols=140 Identities=8% Similarity=0.049 Sum_probs=92.9
Q ss_pred EEEEEecccccCCHHHHHHHHHHHHhC-CCeEEEEEcCCCCCCCCCCCCchhH---HHhcCCCeEEEeeccH---HHhhc
Q 011789 284 VLYVSFGSYAHVSKRDLIEIANGIAKS-KVTFIWILRPDIVSSDDPNPLPEDF---KKEVADRSMIITWCCQ---TSVLA 356 (477)
Q Consensus 284 ~I~vs~Gs~~~~~~~~~~~~~~al~~~-~~~~i~~~~~~~~~~~~~~~lp~~~---~~~~~~nv~v~~~~p~---~~lL~ 356 (477)
.+++..|+... .+....++++++.. +.++++ ++.... ...+-+.. ...+++||.+.+|+|+ ..++.
T Consensus 24 ~~i~~~G~~~~--~Kg~~~li~a~~~l~~~~l~i-~G~~~~----~~~l~~~~~~~~~~l~~~v~~~g~~~~~e~~~~~~ 96 (177)
T 2f9f_A 24 DFWLSVNRIYP--EKRIELQLEVFKKLQDEKLYI-VGWFSK----GDHAERYARKIMKIAPDNVKFLGSVSEEELIDLYS 96 (177)
T ss_dssp SCEEEECCSSG--GGTHHHHHHHHHHCTTSCEEE-EBCCCT----TSTHHHHHHHHHHHSCTTEEEEESCCHHHHHHHHH
T ss_pred CEEEEEecccc--ccCHHHHHHHHHhCCCcEEEE-EecCcc----HHHHHHHHHhhhcccCCcEEEeCCCCHHHHHHHHH
Confidence 45667787752 33456677777776 445444 443311 11221111 2234579999999998 35899
Q ss_pred cCCCCcccc---ccCCc-hhhHHHhcCcceeccccccchhhHHHHHHhhhcceeeecCCCCcCHHHHHHHHHHHhcCCch
Q 011789 357 HPAIGGFLT---HCGWN-SVLEGLWCGVPLLCFPLYTDQFTNRKLAVDDWNVGLNLSNEKVITKEEVSKNVHLLMGEKSG 432 (477)
Q Consensus 357 ~~~~~~~It---HgG~g-s~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~G~~~~~~~~~~~~~l~~~i~~~l~~~~~ 432 (477)
.+++ +|. +.|+| ++.||+++|+|+|+.. ...+...+++. +.|..+ .-+.+++.++|.++++|+
T Consensus 97 ~adi--~v~ps~~e~~~~~~~Eama~G~PvI~~~----~~~~~e~i~~~-~~g~~~----~~d~~~l~~~i~~l~~~~-- 163 (177)
T 2f9f_A 97 RCKG--LLCTAKDEDFGLTPIEAMASGKPVIAVN----EGGFKETVINE-KTGYLV----NADVNEIIDAMKKVSKNP-- 163 (177)
T ss_dssp HCSE--EEECCSSCCSCHHHHHHHHTTCCEEEES----SHHHHHHCCBT-TTEEEE----CSCHHHHHHHHHHHHHCT--
T ss_pred hCCE--EEeCCCcCCCChHHHHHHHcCCcEEEeC----CCCHHHHhcCC-CccEEe----CCCHHHHHHHHHHHHhCH--
Confidence 9998 554 34554 9999999999999854 45667777766 778777 248899999999999887
Q ss_pred HHH-HHHHHHHHH
Q 011789 433 AKY-RNAAKQVKK 444 (477)
Q Consensus 433 ~~~-~~~a~~l~~ 444 (477)
+. ++++++.++
T Consensus 164 -~~~~~~~~~~a~ 175 (177)
T 2f9f_A 164 -DKFKKDCFRRAK 175 (177)
T ss_dssp -TTTHHHHHHHHH
T ss_pred -HHHHHHHHHHHh
Confidence 43 555554443
No 47
>2xci_A KDO-transferase, 3-deoxy-D-manno-2-octulosonic acid transferase; KDTA, GSEA, glycosyltransferase superfamily B,; HET: PG4; 2.00A {Aquifex aeolicus} PDB: 2xcu_A*
Probab=98.43 E-value=5.3e-05 Score=74.21 Aligned_cols=97 Identities=12% Similarity=0.211 Sum_probs=72.0
Q ss_pred CeEEEeeccHH-HhhccCCCCcccc---c--cCCchhhHHHhcCcceeccccccchhhHHHHHHhhhcceeeecCCCCcC
Q 011789 342 RSMIITWCCQT-SVLAHPAIGGFLT---H--CGWNSVLEGLWCGVPLLCFPLYTDQFTNRKLAVDDWNVGLNLSNEKVIT 415 (477)
Q Consensus 342 nv~v~~~~p~~-~lL~~~~~~~~It---H--gG~gs~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~G~~~~~~~~~~ 415 (477)
++++.++.... .+++.+++ ++. . +|..++.||+++|+|+|+-|...+.+.....+.+. |.++.. -+
T Consensus 261 ~v~~~~~~~dl~~~y~~aDv--~vl~ss~~e~gg~~~lEAmA~G~PVI~~~~~~~~~e~~~~~~~~-G~l~~~-----~d 332 (374)
T 2xci_A 261 DVILVDRFGILKELYPVGKI--AIVGGTFVNIGGHNLLEPTCWGIPVIYGPYTHKVNDLKEFLEKE-GAGFEV-----KN 332 (374)
T ss_dssp SEEECCSSSCHHHHGGGEEE--EEECSSSSSSCCCCCHHHHTTTCCEEECSCCTTSHHHHHHHHHT-TCEEEC-----CS
T ss_pred cEEEECCHHHHHHHHHhCCE--EEECCcccCCCCcCHHHHHHhCCCEEECCCccChHHHHHHHHHC-CCEEEe-----CC
Confidence 45555554444 58888887 443 2 23478999999999999877777777777666667 887777 37
Q ss_pred HHHHHHHHHHHhcCCch-HHHHHHHHHHHHHHH
Q 011789 416 KEEVSKNVHLLMGEKSG-AKYRNAAKQVKKAME 447 (477)
Q Consensus 416 ~~~l~~~i~~~l~~~~~-~~~~~~a~~l~~~~~ 447 (477)
.++|.++|.++++| +. +.+.+++++..+.-.
T Consensus 333 ~~~La~ai~~ll~d-~~r~~mg~~ar~~~~~~~ 364 (374)
T 2xci_A 333 ETELVTKLTELLSV-KKEIKVEEKSREIKGCYL 364 (374)
T ss_dssp HHHHHHHHHHHHHS-CCCCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhH-HHHHHHHHHHHHHHHhcc
Confidence 89999999999987 43 578888888776654
No 48
>2bfw_A GLGA glycogen synthase; glycosyltransferase family 5 UDP/ADP-glucose-glycogen syntha rossman folds, transferase; 1.8A {Pyrococcus abyssi} SCOP: c.87.1.8
Probab=97.83 E-value=0.00016 Score=63.68 Aligned_cols=78 Identities=9% Similarity=0.067 Sum_probs=60.9
Q ss_pred CeEE-EeeccHH---HhhccCCCCccccc---cC-CchhhHHHhcCcceeccccccchhhHHHHHHhhhcceeeecCCCC
Q 011789 342 RSMI-ITWCCQT---SVLAHPAIGGFLTH---CG-WNSVLEGLWCGVPLLCFPLYTDQFTNRKLAVDDWNVGLNLSNEKV 413 (477)
Q Consensus 342 nv~v-~~~~p~~---~lL~~~~~~~~ItH---gG-~gs~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~G~~~~~~~~ 413 (477)
+|.+ .+++++. .++..+++ +|.- .| -.++.||+++|+|+|+.. -......+ .. +.|..+ +.
T Consensus 96 ~v~~~~g~~~~~~~~~~~~~ad~--~l~ps~~e~~~~~~~Ea~a~G~PvI~~~----~~~~~e~~-~~-~~g~~~---~~ 164 (200)
T 2bfw_A 96 NVKVITEMLSREFVRELYGSVDF--VIIPSYFEPFGLVALEAMCLGAIPIASA----VGGLRDII-TN-ETGILV---KA 164 (200)
T ss_dssp TEEEECSCCCHHHHHHHHTTCSE--EEECCSCCSSCHHHHHHHHTTCEEEEES----CHHHHHHC-CT-TTCEEE---CT
T ss_pred CEEEEeccCCHHHHHHHHHHCCE--EEECCCCCCccHHHHHHHHCCCCEEEeC----CCChHHHc-CC-CceEEe---cC
Confidence 8999 8999854 48899998 5532 23 457899999999999864 44566666 56 788888 44
Q ss_pred cCHHHHHHHHHHHhc-CC
Q 011789 414 ITKEEVSKNVHLLMG-EK 430 (477)
Q Consensus 414 ~~~~~l~~~i~~~l~-~~ 430 (477)
-+.+++.++|.++++ |+
T Consensus 165 ~~~~~l~~~i~~l~~~~~ 182 (200)
T 2bfw_A 165 GDPGELANAILKALELSR 182 (200)
T ss_dssp TCHHHHHHHHHHHHHCCH
T ss_pred CCHHHHHHHHHHHHhcCH
Confidence 589999999999999 87
No 49
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=97.81 E-value=0.0005 Score=73.09 Aligned_cols=177 Identities=13% Similarity=0.147 Sum_probs=114.5
Q ss_pred CCcEEEEEecccccCCHHHHHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCchhHHHh-----c-CCCeEEEeeccHHH-
Q 011789 281 KGSVLYVSFGSYAHVSKRDLIEIANGIAKSKVTFIWILRPDIVSSDDPNPLPEDFKKE-----V-ADRSMIITWCCQTS- 353 (477)
Q Consensus 281 ~~~~I~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~lp~~~~~~-----~-~~nv~v~~~~p~~~- 353 (477)
++.+||.+|.+....+++.+...++-|++.+.-++|....+.. ....+.+. + ++++.+.+.+|..+
T Consensus 521 ~~~v~f~~fN~~~Ki~p~~~~~W~~IL~~vP~S~L~Ll~~~~~-------~~~~l~~~~~~~gi~~~r~~f~~~~~~~~~ 593 (723)
T 4gyw_A 521 EDAIVYCNFNQLYKIDPSTLQMWANILKRVPNSVLWLLRFPAV-------GEPNIQQYAQNMGLPQNRIIFSPVAPKEEH 593 (723)
T ss_dssp TTSEEEECCSCGGGCCHHHHHHHHHHHHHCSSEEEEEEETTGG-------GHHHHHHHHHHTTCCGGGEEEEECCCHHHH
T ss_pred CCCEEEEeCCccccCCHHHHHHHHHHHHhCCCCeEEEEeCcHH-------HHHHHHHHHHhcCCCcCeEEECCCCCHHHH
Confidence 4569999999999999999999999999999999998865421 11122211 1 25678888887665
Q ss_pred --hhccCCCCcccc---ccCCchhhHHHhcCcceecccc-ccchhhHHHHHHhhhcceeeecCCCCcCHHHHHHHHHHHh
Q 011789 354 --VLAHPAIGGFLT---HCGWNSVLEGLWCGVPLLCFPL-YTDQFTNRKLAVDDWNVGLNLSNEKVITKEEVSKNVHLLM 427 (477)
Q Consensus 354 --lL~~~~~~~~It---HgG~gs~~eal~~GvP~v~~P~-~~DQ~~na~~v~~~~G~G~~~~~~~~~~~~~l~~~i~~~l 427 (477)
.+..+++ ++- .+|.+|+.|||++|||+|++|- ..=...-+..+... |+.-.+ --+.++-.+...++-
T Consensus 594 l~~~~~~Di--~LDt~p~~g~tT~~eal~~GvPvvt~~g~~~~sR~~~s~l~~~-gl~e~i----a~~~~~Y~~~a~~la 666 (723)
T 4gyw_A 594 VRRGQLADV--CLDTPLCNGHTTGMDVLWAGTPMVTMPGETLASRVAASQLTCL-GCLELI----AKNRQEYEDIAVKLG 666 (723)
T ss_dssp HHHGGGCSE--EECCSSSCCSHHHHHHHHTTCCEEBCCCSSGGGTHHHHHHHHH-TCGGGB----CSSHHHHHHHHHHHH
T ss_pred HHHhCCCeE--EeCCCCcCCHHHHHHHHHcCCCEEEccCCCccHhHHHHHHHHc-CCcccc----cCCHHHHHHHHHHHh
Confidence 4566666 654 8999999999999999999994 22233445566777 877666 245566555555666
Q ss_pred cCCchHHHHHHHH-HHHHHHHHHhcCCCchHHHHHHHHHHHHHhhhhhcc
Q 011789 428 GEKSGAKYRNAAK-QVKKAMEYALQPNGSSDKNMDQFIKDLKTRIQSKCD 476 (477)
Q Consensus 428 ~~~~~~~~~~~a~-~l~~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~ 476 (477)
+|+ +..++.+ +|.+.+..+ +=-.....+++|-+-+++.-+..|+
T Consensus 667 ~d~---~~l~~lr~~l~~~~~~s--~l~d~~~~~~~le~a~~~~w~r~~~ 711 (723)
T 4gyw_A 667 TDL---EYLKKVRGKVWKQRISS--PLFNTKQYTMELERLYLQMWEHYAA 711 (723)
T ss_dssp HCH---HHHHHHHHHHHHHHHHS--STTCHHHHHHHHHHHHHHHHHHHHT
T ss_pred cCH---HHHHHHHHHHHHHHHhC--cCcCHHHHHHHHHHHHHHHHHHHHc
Confidence 676 4433332 344444432 2234445555555555555455553
No 50
>3qhp_A Type 1 capsular polysaccharide biosynthesis prote (CAPJ); rossmann fold, glycosyltransferase, transferase; 1.50A {Helicobacter pylori}
Probab=97.80 E-value=8.2e-05 Score=63.39 Aligned_cols=141 Identities=13% Similarity=0.245 Sum_probs=84.1
Q ss_pred cEEEEEecccccCCHHHHHHHHHHHHhCC--CeE-EEEEcCCCCCCCCCCCCchhHH---HhcCCCeEEEeeccHHH---
Q 011789 283 SVLYVSFGSYAHVSKRDLIEIANGIAKSK--VTF-IWILRPDIVSSDDPNPLPEDFK---KEVADRSMIITWCCQTS--- 353 (477)
Q Consensus 283 ~~I~vs~Gs~~~~~~~~~~~~~~al~~~~--~~~-i~~~~~~~~~~~~~~~lp~~~~---~~~~~nv~v~~~~p~~~--- 353 (477)
+++++..|++.. .+....+++++.... ..+ ++.++.. ...+.++ ++...++.+ +|+|+.+
T Consensus 2 ~~~i~~~G~~~~--~Kg~~~li~a~~~l~~~~~~~l~i~G~g--------~~~~~~~~~~~~~~~~v~~-g~~~~~~~~~ 70 (166)
T 3qhp_A 2 PFKIAMVGRYSN--EKNQSVLIKAVALSKYKQDIVLLLKGKG--------PDEKKIKLLAQKLGVKAEF-GFVNSNELLE 70 (166)
T ss_dssp CEEEEEESCCST--TTTHHHHHHHHHTCTTGGGEEEEEECCS--------TTHHHHHHHHHHHTCEEEC-CCCCHHHHHH
T ss_pred ceEEEEEeccch--hcCHHHHHHHHHHhccCCCeEEEEEeCC--------ccHHHHHHHHHHcCCeEEE-eecCHHHHHH
Confidence 478888888753 334566677776653 123 3334432 1122222 333447788 9998764
Q ss_pred hhccCCCCcccc----ccCCchhhHHHhcCc-ceeccccccchhhHHHHHHhhhcceeeecCCCCcCHHHHHHHHHHHhc
Q 011789 354 VLAHPAIGGFLT----HCGWNSVLEGLWCGV-PLLCFPLYTDQFTNRKLAVDDWNVGLNLSNEKVITKEEVSKNVHLLMG 428 (477)
Q Consensus 354 lL~~~~~~~~It----HgG~gs~~eal~~Gv-P~v~~P~~~DQ~~na~~v~~~~G~G~~~~~~~~~~~~~l~~~i~~~l~ 428 (477)
++..+++ +|. -|.-.++.||+++|+ |+|+... .......+... +. .+ ..-+.+++.++|.++++
T Consensus 71 ~~~~adv--~v~ps~~e~~~~~~~Eama~G~vPvi~~~~---~~~~~~~~~~~-~~--~~---~~~~~~~l~~~i~~l~~ 139 (166)
T 3qhp_A 71 ILKTCTL--YVHAANVESEAIACLEAISVGIVPVIANSP---LSATRQFALDE-RS--LF---EPNNAKDLSAKIDWWLE 139 (166)
T ss_dssp HHTTCSE--EEECCCSCCCCHHHHHHHHTTCCEEEECCT---TCGGGGGCSSG-GG--EE---CTTCHHHHHHHHHHHHH
T ss_pred HHHhCCE--EEECCcccCccHHHHHHHhcCCCcEEeeCC---CCchhhhccCC-ce--EE---cCCCHHHHHHHHHHHHh
Confidence 8899998 554 233459999999996 9999331 11222222233 33 33 24589999999999999
Q ss_pred CCch-HHHHHHHHHHHHH
Q 011789 429 EKSG-AKYRNAAKQVKKA 445 (477)
Q Consensus 429 ~~~~-~~~~~~a~~l~~~ 445 (477)
|++. +.+.+++++..+.
T Consensus 140 ~~~~~~~~~~~~~~~~~~ 157 (166)
T 3qhp_A 140 NKLERERMQNEYAKSALN 157 (166)
T ss_dssp CHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHH
Confidence 8732 3455555554433
No 51
>3tov_A Glycosyl transferase family 9; structural genomics, PSI-BIOL protein structure initiative, midwest center for structural genomics, MCSG; 2.98A {Veillonella parvula}
Probab=97.58 E-value=0.0028 Score=61.18 Aligned_cols=110 Identities=16% Similarity=0.036 Sum_probs=77.2
Q ss_pred CCCCCCcEEEEEcCCCccCHHHHHHHHHHHHhC--CCeEEEEeCCcchhhhccCCCCCCccccccccCCCCCe-EEEecC
Q 011789 3 GNKTQKPHAIFISYPLQGHVNPSVQLALKLASQ--GFTITFVNTHFIHQQMTKASPEMGSDIFAGVRKSGLDI-RYMTLS 79 (477)
Q Consensus 3 ~~~~~~~~il~~~~~~~GH~~p~l~La~~L~~r--Gh~Vt~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~-~~~~l~ 79 (477)
++.-.++||+++-..+.|++.-+.++.+.|+++ +.+|++++.+.+.+.+...+ .+ +++.++
T Consensus 3 ~~~l~~~~iLvi~~~~lGD~i~~~P~l~~L~~~~P~a~I~~l~~~~~~~l~~~~p----------------~vd~vi~~~ 66 (349)
T 3tov_A 3 AMELDYKRIVVTFLMHLGDVILTTPFLEVLRKAAPHSHITYVIDEKLQQVMEYNP----------------NIDELIVVD 66 (349)
T ss_dssp SCCCTTCEEEEECCCCHHHHHTTHHHHHHHHHHCTTSEEEEEEEGGGGGGTSSCT----------------TCSEEEEEC
T ss_pred CcCCCCCEEEEEecCcccHHHHHHHHHHHHHHHCCCCEEEEEECcchhHHHhcCC----------------CccEEEEeC
Confidence 345678999999999999999999999999998 89999999999988874322 23 345444
Q ss_pred CCCCCCCCCCCcHHHHHHHHHHHhHHHHHHHHHHhHhcCCCc-cEEEecCCCcchHHHHHHhCCceEEE
Q 011789 80 DGLPLGFDRSLNHEQFMSSLLHVFSAHAEEVIGQIVRSGENV-HCLIADTYFVWPSKLAKKFGLYYISF 147 (477)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~p-D~iI~D~~~~~~~~~A~~~gIP~v~~ 147 (477)
.. . ....+. .+..++..++.+ ++ |++|.=....-...++...|+|..+-
T Consensus 67 ~~--------~-~~~~~~--------~~~~l~~~Lr~~--~y~D~vidl~~~~rs~~l~~~~~a~~riG 116 (349)
T 3tov_A 67 KK--------G-RHNSIS--------GLNEVAREINAK--GKTDIVINLHPNERTSYLAWKIHAPITTG 116 (349)
T ss_dssp CS--------S-HHHHHH--------HHHHHHHHHHHH--CCCCEEEECCCSHHHHHHHHHHCCSEEEE
T ss_pred cc--------c-ccccHH--------HHHHHHHHHhhC--CCCeEEEECCCChHHHHHHHHhCCCeEEe
Confidence 21 0 011111 123445555554 89 99997655555666888899997553
No 52
>3q3e_A HMW1C-like glycosyltransferase; N-glycosylation; 2.10A {Actinobacillus pleuropneumoniae serovaorganism_taxid} PDB: 3q3h_A* 3q3i_A
Probab=97.46 E-value=0.00093 Score=68.49 Aligned_cols=134 Identities=10% Similarity=0.023 Sum_probs=91.7
Q ss_pred cEEEEEecccccCCHHHHHHHHHHHHhCCCeEEEEE--cCCCCCCCCCCCCchhHH-----HhcCCCeEEEeeccHHH--
Q 011789 283 SVLYVSFGSYAHVSKRDLIEIANGIAKSKVTFIWIL--RPDIVSSDDPNPLPEDFK-----KEVADRSMIITWCCQTS-- 353 (477)
Q Consensus 283 ~~I~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~--~~~~~~~~~~~~lp~~~~-----~~~~~nv~v~~~~p~~~-- 353 (477)
.++|.+|++.....+..++...+-+++.+..++|.. +... ..-..+. ..+++++.+.+.+|+.+
T Consensus 441 ~v~Fg~fn~~~Ki~p~~l~~WarIL~~vP~s~L~l~~~g~~~-------g~~~~~~~~~~~~GI~~Rv~F~g~~p~~e~l 513 (631)
T 3q3e_A 441 VVNIGIASTTMKLNPYFLEALKAIRDRAKVKVHFHFALGQSN-------GITHPYVERFIKSYLGDSATAHPHSPYHQYL 513 (631)
T ss_dssp EEEEEEEECSTTCCHHHHHHHHHHHHHCSSEEEEEEEESSCC-------GGGHHHHHHHHHHHHGGGEEEECCCCHHHHH
T ss_pred eEEEEECCccccCCHHHHHHHHHHHHhCCCcEEEEEecCCCc-------hhhHHHHHHHHHcCCCccEEEcCCCCHHHHH
Confidence 589999999888889999988888888887777643 3220 1111111 12346788888888765
Q ss_pred -hhccCCCCcccc---ccCCchhhHHHhcCcceecccccc-chhhHHHHHHhhhcceee-ecCCCCcCHHHHHHHHHHHh
Q 011789 354 -VLAHPAIGGFLT---HCGWNSVLEGLWCGVPLLCFPLYT-DQFTNRKLAVDDWNVGLN-LSNEKVITKEEVSKNVHLLM 427 (477)
Q Consensus 354 -lL~~~~~~~~It---HgG~gs~~eal~~GvP~v~~P~~~-DQ~~na~~v~~~~G~G~~-~~~~~~~~~~~l~~~i~~~l 427 (477)
.+..+++ |+. .+|..|+.|||++|||+|+.+-.. -...-+..+... |+.-. + --+.++..+...++.
T Consensus 514 a~y~~aDI--fLDpfpy~GgtTtlEALwmGVPVVTl~G~~~asRvgaSlL~~~-GLpE~LI----A~d~eeYv~~Av~La 586 (631)
T 3q3e_A 514 RILHNCDM--MVNPFPFGNTNGIIDMVTLGLVGVCKTGAEVHEHIDEGLFKRL-GLPEWLI----ANTVDEYVERAVRLA 586 (631)
T ss_dssp HHHHTCSE--EECCSSSCCSHHHHHHHHTTCCEEEECCSSHHHHHHHHHHHHT-TCCGGGE----ESSHHHHHHHHHHHH
T ss_pred HHHhcCcE--EEeCCcccCChHHHHHHHcCCCEEeccCCcHHHHhHHHHHHhc-CCCccee----cCCHHHHHHHHHHHh
Confidence 4578877 543 378899999999999999988421 112223345566 77652 4 246788888888888
Q ss_pred cCC
Q 011789 428 GEK 430 (477)
Q Consensus 428 ~~~ 430 (477)
+|+
T Consensus 587 ~D~ 589 (631)
T 3q3e_A 587 ENH 589 (631)
T ss_dssp HCH
T ss_pred CCH
Confidence 888
No 53
>1psw_A ADP-heptose LPS heptosyltransferase II; structural genomics, NYSGXRC, LPS biosynthetic pathway, PSI, protein structure initiative; 2.00A {Escherichia coli} SCOP: c.87.1.7
Probab=97.38 E-value=0.024 Score=54.33 Aligned_cols=104 Identities=10% Similarity=0.039 Sum_probs=69.3
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhC--CCeEEEEeCCcchhhhccCCCCCCccccccccCCCCCe-EEEecCCCCCCC
Q 011789 9 PHAIFISYPLQGHVNPSVQLALKLASQ--GFTITFVNTHFIHQQMTKASPEMGSDIFAGVRKSGLDI-RYMTLSDGLPLG 85 (477)
Q Consensus 9 ~~il~~~~~~~GH~~p~l~La~~L~~r--Gh~Vt~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~-~~~~l~~~~~~~ 85 (477)
|||+++...+.|++.-..++.++|+++ |.+|++++.+.+.+.+...+ .+ +++.++.. ..
T Consensus 1 mkILii~~~~~GD~i~~~p~l~~Lk~~~P~~~i~~l~~~~~~~l~~~~p----------------~i~~v~~~~~~--~~ 62 (348)
T 1psw_A 1 MKILVIGPSWVGDMMMSQSLYRTLQARYPQAIIDVMAPAWCRPLLSRMP----------------EVNEAIPMPLG--HG 62 (348)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHHHSTTCEEEEEECGGGHHHHTTCT----------------TEEEEEEC-------
T ss_pred CeEEEEeccccCHHHHHHHHHHHHHHHCCCCEEEEEECcchhHHHhcCC----------------ccCEEEEecCC--cc
Confidence 699999999999999999999999987 99999999998877663321 23 34444321 00
Q ss_pred CCCCCcHHHHHHHHHHHhHHHHHHHHHHhHhcCCCccEEEecCCCcchHHHHHHhCCceEEE
Q 011789 86 FDRSLNHEQFMSSLLHVFSAHAEEVIGQIVRSGENVHCLIADTYFVWPSKLAKKFGLYYISF 147 (477)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~pD~iI~D~~~~~~~~~A~~~gIP~v~~ 147 (477)
.. ....+..+...++.+ +||++|.-........++...|+|....
T Consensus 63 ---~~------------~~~~~~~l~~~l~~~--~~D~vid~~~~~~sa~~~~~~~~~~~ig 107 (348)
T 1psw_A 63 ---AL------------EIGERRKLGHSLREK--RYDRAYVLPNSFKSALVPLFAGIPHRTG 107 (348)
T ss_dssp -----------------CHHHHHHHHHHTTTT--TCSEEEECSCCSGGGHHHHHTTCSEEEE
T ss_pred ---cc------------chHHHHHHHHHHHhc--CCCEEEECCCChHHHHHHHHhCCCEEec
Confidence 00 011233455666554 8999993333345566788889997443
No 54
>3rhz_A GTF3, nucleotide sugar synthetase-like protein; glycosyltransferase, transferase; HET: UDP; 1.90A {Streptococcus parasanguinis} PDB: 3qkw_A*
Probab=97.24 E-value=0.00043 Score=66.57 Aligned_cols=111 Identities=11% Similarity=0.100 Sum_probs=81.9
Q ss_pred CeEEEeeccHHHh---hccCCCCccccccCC---------chhhHHHhcCcceeccccccchhhHHHHHHhhhcceeeec
Q 011789 342 RSMIITWCCQTSV---LAHPAIGGFLTHCGW---------NSVLEGLWCGVPLLCFPLYTDQFTNRKLAVDDWNVGLNLS 409 (477)
Q Consensus 342 nv~v~~~~p~~~l---L~~~~~~~~ItHgG~---------gs~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~G~~~~ 409 (477)
||...+|+|+.++ |..++.+++..-+.+ +-+.|++++|+|+|+. +...++..+++. |+|..+
T Consensus 215 nV~f~G~~~~~el~~~l~~~~~~lv~~~~~~~~y~~~~~P~Kl~eymA~G~PVI~~----~~~~~~~~v~~~-~~G~~~- 288 (339)
T 3rhz_A 215 NVHKINYRPDEQLLMEMSQGGFGLVWMDDKDKEYQSLYCSYKLGSFLAAGIPVIVQ----EGIANQELIENN-GLGWIV- 288 (339)
T ss_dssp TEEEEECCCHHHHHHHHHTEEEEECCCCGGGHHHHTTCCCHHHHHHHHHTCCEEEE----TTCTTTHHHHHH-TCEEEE-
T ss_pred CEEEeCCCCHHHHHHHHHhCCEEEEECCCchhHHHHhcChHHHHHHHHcCCCEEEc----cChhHHHHHHhC-CeEEEe-
Confidence 9999999999874 555566555533322 3478999999999974 466788899999 999999
Q ss_pred CCCCcCHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHH
Q 011789 410 NEKVITKEEVSKNVHLLMGEKSGAKYRNAAKQVKKAMEYALQPNGSSDKNMDQFIKDL 467 (477)
Q Consensus 410 ~~~~~~~~~l~~~i~~~l~~~~~~~~~~~a~~l~~~~~~~~~~gg~~~~~~~~~~~~~ 467 (477)
+ +.+++.+++..+.. ++.+++++|+++.+++++. |.-.++.+.+.+..+
T Consensus 289 --~--~~~e~~~~i~~l~~-~~~~~m~~na~~~a~~~~~----~~f~k~~l~~~~~~~ 337 (339)
T 3rhz_A 289 --K--DVEEAIMKVKNVNE-DEYIELVKNVRSFNPILRK----GFFTRRLLTESVFQA 337 (339)
T ss_dssp --S--SHHHHHHHHHHCCH-HHHHHHHHHHHHHTHHHHT----THHHHHHHHHHHHHH
T ss_pred --C--CHHHHHHHHHHhCH-HHHHHHHHHHHHHHHHhhc----cHHHHHHHHHHHHHh
Confidence 3 56788888887643 3356899999999999885 555566665555443
No 55
>2gt1_A Lipopolysaccharide heptosyltransferase-1; GT-B fold; 1.90A {Escherichia coli UTI89} PDB: 2h1f_A* 2h1h_A*
Probab=96.76 E-value=0.014 Score=55.48 Aligned_cols=45 Identities=11% Similarity=0.082 Sum_probs=41.1
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhC--CCeEEEEeCCcchhhhcc
Q 011789 9 PHAIFISYPLQGHVNPSVQLALKLASQ--GFTITFVNTHFIHQQMTK 53 (477)
Q Consensus 9 ~~il~~~~~~~GH~~p~l~La~~L~~r--Gh~Vt~~~~~~~~~~~~~ 53 (477)
|||+++-..+.|++.-..++.++|+++ +.+|++++.+.+.+.+..
T Consensus 1 ~~ILii~~~~iGD~i~~~p~l~~Lk~~~P~a~I~~l~~~~~~~l~~~ 47 (326)
T 2gt1_A 1 MRVLIVKTSSMGDVLHTLPALTDAQQAIPGIKFDWVVEEGFAQIPSW 47 (326)
T ss_dssp CEEEEECCCCHHHHHHHHHHHHHHHHHSTTCEEEEEEEGGGTHHHHT
T ss_pred CeEEEEeccccchHHhHHHHHHHHHHhCCCCEEEEEEehhhhHHHhc
Confidence 699999999999999999999999988 899999999998887743
No 56
>3vue_A GBSS-I, granule-bound starch synthase 1, chloroplastic/amyloplastic; rossmann fold, glycosyltransferase, transferase; 2.70A {Oryza sativa japonica group} PDB: 3vuf_A*
Probab=94.56 E-value=0.22 Score=50.74 Aligned_cols=134 Identities=10% Similarity=0.128 Sum_probs=78.5
Q ss_pred CcEEEEEecccccCCHHHHHHHHHHHH---hCCCeEEEEEcCCCCCCCCCCCCchhHHHhcCCCeEEEeeccHH---Hhh
Q 011789 282 GSVLYVSFGSYAHVSKRDLIEIANGIA---KSKVTFIWILRPDIVSSDDPNPLPEDFKKEVADRSMIITWCCQT---SVL 355 (477)
Q Consensus 282 ~~~I~vs~Gs~~~~~~~~~~~~~~al~---~~~~~~i~~~~~~~~~~~~~~~lp~~~~~~~~~nv~v~~~~p~~---~lL 355 (477)
+.++++..|.+.. .+-+..+++|+. +.+.++++...++.. ....-....++.+.++.+....+.. .++
T Consensus 326 ~~p~i~~vgRl~~--~Kg~~~li~a~~~l~~~~~~l~l~G~G~~~----~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~ 399 (536)
T 3vue_A 326 KIPLIAFIGRLEE--QKGPDVMAAAIPELMQEDVQIVLLGTGKKK----FEKLLKSMEEKYPGKVRAVVKFNAPLAHLIM 399 (536)
T ss_dssp TSCEEEEECCBSG--GGCHHHHHHHHHHHTTSSCEEEEECCBCHH----HHHHHHHHHHHSTTTEEEECSCCHHHHHHHH
T ss_pred CCcEEEEEeeccc--cCChHHHHHHHHHhHhhCCeEEEEeccCch----HHHHHHHHHhhcCCceEEEEeccHHHHHHHH
Confidence 3456677888753 223444444443 456666554332210 0000012234566888888776654 378
Q ss_pred ccCCCCccccc---cCC-chhhHHHhcCcceeccccccchhhHHHHHHhhhcceeeecCC-------CCcCHHHHHHHHH
Q 011789 356 AHPAIGGFLTH---CGW-NSVLEGLWCGVPLLCFPLYTDQFTNRKLAVDDWNVGLNLSNE-------KVITKEEVSKNVH 424 (477)
Q Consensus 356 ~~~~~~~~ItH---gG~-gs~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~G~~~~~~-------~~~~~~~l~~~i~ 424 (477)
+.+++ ||.- =|+ .+++||+++|+|+|+. |.......+.+. .-|...... +..+.+.|.++|+
T Consensus 400 ~~aD~--~v~PS~~E~fgl~~lEAma~G~PvI~s----~~gG~~e~V~dg-~~G~~~~~~~~~g~l~~~~d~~~la~ai~ 472 (536)
T 3vue_A 400 AGADV--LAVPSRFEPCGLIQLQGMRYGTPCACA----STGGLVDTVIEG-KTGFHMGRLSVDCKVVEPSDVKKVAATLK 472 (536)
T ss_dssp HHCSE--EEECCSCCSSCSHHHHHHHTTCCEEEC----SCTHHHHHCCBT-TTEEECCCCCSCTTCCCHHHHHHHHHHHH
T ss_pred Hhhhe--eecccccCCCCHHHHHHHHcCCCEEEc----CCCCchheeeCC-CCccccccCCCceeEECCCCHHHHHHHHH
Confidence 88887 6542 244 4889999999999984 445666666665 556533110 1235688999998
Q ss_pred HHhc
Q 011789 425 LLMG 428 (477)
Q Consensus 425 ~~l~ 428 (477)
++++
T Consensus 473 ral~ 476 (536)
T 3vue_A 473 RAIK 476 (536)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 8774
No 57
>2x0d_A WSAF; GT4 family, transferase; HET: MSE; 2.28A {Geobacillus stearothermophilus} PDB: 2x0f_A* 2x0e_A*
Probab=94.49 E-value=0.016 Score=57.29 Aligned_cols=84 Identities=14% Similarity=0.074 Sum_probs=58.5
Q ss_pred CCeEEEeeccHHH---hhccCCCCcccc--c-cCC-chhhHHHhcCcceeccccccchhhHHHHHHhhhcceeeecCCCC
Q 011789 341 DRSMIITWCCQTS---VLAHPAIGGFLT--H-CGW-NSVLEGLWCGVPLLCFPLYTDQFTNRKLAVDDWNVGLNLSNEKV 413 (477)
Q Consensus 341 ~nv~v~~~~p~~~---lL~~~~~~~~It--H-gG~-gs~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~G~~~~~~~~ 413 (477)
++|.+.+++|+.+ ++..+++ ||. . =|. .++.||+++|+|+|+ -..+ ....++.. ..|+.+ +.
T Consensus 295 ~~v~f~G~~~~~~l~~~~~~adv--~v~pS~~E~~g~~~lEAmA~G~PVV~-~~~g----~~e~v~~~-~~G~lv---~~ 363 (413)
T 2x0d_A 295 IHLNSLGKLTLEDYADLLKRSSI--GISLMISPHPSYPPLEMAHFGLRVIT-NKYE----NKDLSNWH-SNIVSL---EQ 363 (413)
T ss_dssp EEEEEEESCCHHHHHHHHHHCCE--EECCCSSSSCCSHHHHHHHTTCEEEE-ECBT----TBCGGGTB-TTEEEE---SS
T ss_pred CcEEEcCCCCHHHHHHHHHhCCE--EEEecCCCCCCcHHHHHHhCCCcEEE-eCCC----cchhhhcC-CCEEEe---CC
Confidence 5788899998775 8899998 553 2 244 467999999999997 2221 22334444 578878 45
Q ss_pred cCHHHHHHHHHHHhcCCchHHHHHH
Q 011789 414 ITKEEVSKNVHLLMGEKSGAKYRNA 438 (477)
Q Consensus 414 ~~~~~l~~~i~~~l~~~~~~~~~~~ 438 (477)
-+.++|.++|.++++|+ +.+++
T Consensus 364 ~d~~~la~ai~~ll~~~---~~~~~ 385 (413)
T 2x0d_A 364 LNPENIAETLVELCMSF---NNRDV 385 (413)
T ss_dssp CSHHHHHHHHHHHHHHT---C----
T ss_pred CCHHHHHHHHHHHHcCH---HHHHH
Confidence 68999999999999987 55544
No 58
>2phj_A 5'-nucleotidase SURE; SURE protein, putative acid phosphatase, structural genomics, 3-D structure, mixed alpha/beta protein, NPPSFA; 1.50A {Aquifex aeolicus VF5} PDB: 2wqk_A
Probab=92.48 E-value=0.84 Score=41.07 Aligned_cols=114 Identities=8% Similarity=0.011 Sum_probs=65.4
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCcchhhhccCCCCCCccccccccCCCCCeEEEecCCCCCCCCC
Q 011789 8 KPHAIFISYPLQGHVNPSVQLALKLASQGFTITFVNTHFIHQQMTKASPEMGSDIFAGVRKSGLDIRYMTLSDGLPLGFD 87 (477)
Q Consensus 8 ~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 87 (477)
|||||+.-=-+. |.-=...|+++|.+.| +|+++.+...+.-..... ++...+++..+..+.. ..
T Consensus 1 ~M~ILlTNDDGi-~apGi~aL~~~l~~~g-~V~VVAP~~~~Sg~g~si------------t~~~pl~~~~~~~~~~--~~ 64 (251)
T 2phj_A 1 MPTFLLVNDDGY-FSPGINALREALKSLG-RVVVVAPDRNLSGVGHSL------------TFTEPLKMRKIDTDFY--TV 64 (251)
T ss_dssp -CEEEEECSSCT-TCHHHHHHHHHHTTTS-EEEEEEESSCCTTSCCSC------------CCSSCEEEEEEETTEE--EE
T ss_pred CCEEEEECCCCC-CCHHHHHHHHHHHhcC-CEEEEecCCCccCCccce------------ecCCCeEEEEecCCCe--EE
Confidence 588887765444 3444788899999988 999999988876663311 2222556655543311 11
Q ss_pred CCCcHHHHHHHHHHHhHHHHHHHHHHhHhcCCCccEEEecC----------CCc---chHHHHHHhCCceEEEec
Q 011789 88 RSLNHEQFMSSLLHVFSAHAEEVIGQIVRSGENVHCLIADT----------YFV---WPSKLAKKFGLYYISFWT 149 (477)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~pD~iI~D~----------~~~---~~~~~A~~~gIP~v~~~~ 149 (477)
-.+.+.+-...- +..++. . .+||+||+.. ++. ++..-|..+|||.|.++.
T Consensus 65 v~GTPaDCV~la-------l~~l~~---~--~~PDLVvSGIN~G~Nlg~dv~ySGTVgAA~Ea~~~GiPaIA~S~ 127 (251)
T 2phj_A 65 IDGTPADCVHLG-------YRVILE---E--KKPDLVLSGINEGPNLGEDITYSGTVSGAMEGRILGIPSIAFSA 127 (251)
T ss_dssp TTCCHHHHHHHH-------HHTTTT---T--CCCSEEEEEEESSCCCGGGGGGCHHHHHHHHHHHTTCCEEEEEE
T ss_pred ECCCHHHHHHHH-------HHHhcC---C--CCCCEEEECCcCCCcCCCCCccchHHHHHHHHHHcCCCeEEEEc
Confidence 122222222211 122221 1 2899999753 222 233456788999999954
No 59
>3vue_A GBSS-I, granule-bound starch synthase 1, chloroplastic/amyloplastic; rossmann fold, glycosyltransferase, transferase; 2.70A {Oryza sativa japonica group} PDB: 3vuf_A*
Probab=92.05 E-value=0.089 Score=53.72 Aligned_cols=39 Identities=15% Similarity=0.267 Sum_probs=29.5
Q ss_pred CCCCcEEEEEcC--------CCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 011789 5 KTQKPHAIFISY--------PLQGHVNPSVQLALKLASQGFTITFVNTH 45 (477)
Q Consensus 5 ~~~~~~il~~~~--------~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 45 (477)
++..|||+|+++ |+.|++ .-+|.++|+++||+|+++++.
T Consensus 6 ~~~~MkIl~vs~E~~P~~K~GGLadv--v~~L~~aL~~~G~~V~Vi~P~ 52 (536)
T 3vue_A 6 HHHHMNVVFVGAEMAPWSKTGGLGDV--LGGLPPAMAANGHRVMVISPR 52 (536)
T ss_dssp --CCCEEEEECSCBTTTBCSSHHHHH--HHHHHHHHHTTTCEEEEEEEC
T ss_pred CCCCcEEEEEEEeccchhccCcHHHH--HHHHHHHHHHcCCeEEEEecC
Confidence 477899999974 333444 567899999999999999853
No 60
>3ty2_A 5'-nucleotidase SURE; surviVal protein, phosphatase, hydrolase; HET: MSE; 1.89A {Coxiella burnetii} SCOP: c.106.1.0
Probab=90.36 E-value=0.84 Score=41.23 Aligned_cols=115 Identities=12% Similarity=0.053 Sum_probs=64.6
Q ss_pred CCCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCcchhhhccCCCCCCccccccccCCCCCeEEEecCCCCCC
Q 011789 5 KTQKPHAIFISYPLQGHVNPSVQLALKLASQGFTITFVNTHFIHQQMTKASPEMGSDIFAGVRKSGLDIRYMTLSDGLPL 84 (477)
Q Consensus 5 ~~~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 84 (477)
...+||||+.-=-+. |.-=...|+++|.+ +|+|+++.+...+.-..... ++...+++..+.++.
T Consensus 8 ~~~~m~ILlTNDDGi-~apGi~aL~~~l~~-~~~V~VVAP~~~~Sg~g~si------------Tl~~pl~~~~~~~~~-- 71 (261)
T 3ty2_A 8 ATPKLRLLLSNDDGV-YAKGLAILAKTLAD-LGEVDVVAPDRNRSGASNSL------------TLNAPLHIKNLENGM-- 71 (261)
T ss_dssp ---CCEEEEECSSCT-TCHHHHHHHHHHTT-TSEEEEEEESSCCTTCTTCC------------CCSSCEEEEECTTSC--
T ss_pred cCCCCeEEEEcCCCC-CCHHHHHHHHHHHh-cCCEEEEecCCCCcCcccce------------ecCCCeEEEEecCCe--
Confidence 356699888765544 44447788899987 89999999988876663311 222256666654322
Q ss_pred CCCCCCcHHHHHHHHHHHhHHHHHHHHHHhHhcCCCccEEEecC----------CCcchHHH---HHHhCCceEEEec
Q 011789 85 GFDRSLNHEQFMSSLLHVFSAHAEEVIGQIVRSGENVHCLIADT----------YFVWPSKL---AKKFGLYYISFWT 149 (477)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~pD~iI~D~----------~~~~~~~~---A~~~gIP~v~~~~ 149 (477)
..-.+.+.+-...- +..++ . .+||+||+.. ++.+.+.+ |..+|||.|.++.
T Consensus 72 -~~v~GTPaDCV~la-------l~~l~----~--~~PDLVvSGIN~G~Nlg~dv~ySGTVgAA~Ea~~~GiPaIA~S~ 135 (261)
T 3ty2_A 72 -ISVEGTPTDCVHLA-------ITGVL----P--EMPDMVVAGINAGPNLGDDVWYSGTVAAAMEGRFLGLPALAVSL 135 (261)
T ss_dssp -EEESSCHHHHHHHH-------TTTTS----S--SCCSEEEEEEEESCCCGGGGGTCHHHHHC-CCSTTSCCEEEEEE
T ss_pred -EEECCCHHHHHHHH-------HHHhc----C--CCCCEEEECCcCCCCCCCCcCCchHHHHHHHHHHcCCCeEEEEc
Confidence 11122222222211 11222 2 2899999753 22233333 3567999999954
No 61
>2x0d_A WSAF; GT4 family, transferase; HET: MSE; 2.28A {Geobacillus stearothermophilus} PDB: 2x0f_A* 2x0e_A*
Probab=87.18 E-value=0.36 Score=47.37 Aligned_cols=41 Identities=10% Similarity=0.123 Sum_probs=32.3
Q ss_pred CCCcEEEEEcCC-C----ccCHHHHHHHHHHHHhCCCeEEEEeCCc
Q 011789 6 TQKPHAIFISYP-L----QGHVNPSVQLALKLASQGFTITFVNTHF 46 (477)
Q Consensus 6 ~~~~~il~~~~~-~----~GH~~p~l~La~~L~~rGh~Vt~~~~~~ 46 (477)
..+|||++++.. . .|=......|+++|+++||+|++++...
T Consensus 44 ~~~mrI~~v~~~~~p~~~~GG~~~v~~la~~L~~~GheV~Vvt~~~ 89 (413)
T 2x0d_A 44 IKGKRLNLLVPSINQEHMFGGISTALKLFEQFDNKKFKKRIILTDA 89 (413)
T ss_dssp CCSCEEEEEESCCCGGGCSHHHHHHHHHHTTSCTTTCEEEEEESSC
T ss_pred CCCceEEEEeCCCCccccccHHHHHHHHHHHHHHcCCceEEEEecC
Confidence 467999988854 1 1334568999999999999999999864
No 62
>4dzz_A Plasmid partitioning protein PARF; deviant walker BOX, DNA segregation, unknown function; HET: ADP; 1.80A {Escherichia coli} PDB: 4e03_A* 4e07_A* 4e09_A*
Probab=86.38 E-value=3.1 Score=35.76 Aligned_cols=42 Identities=19% Similarity=0.269 Sum_probs=32.0
Q ss_pred CcEEEEE-cCCCccCHHHHHHHHHHHHhCCCeEEEEeCCcchh
Q 011789 8 KPHAIFI-SYPLQGHVNPSVQLALKLASQGFTITFVNTHFIHQ 49 (477)
Q Consensus 8 ~~~il~~-~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~ 49 (477)
|+.|.|+ +-|+.|=.--.+.||..|+++|++|.++-......
T Consensus 1 M~vi~v~s~kgG~GKTt~a~~la~~la~~g~~vlliD~D~~~~ 43 (206)
T 4dzz_A 1 MKVISFLNPKGGSGKTTAVINIATALSRSGYNIAVVDTDPQMS 43 (206)
T ss_dssp CEEEEECCSSTTSSHHHHHHHHHHHHHHTTCCEEEEECCTTCH
T ss_pred CeEEEEEeCCCCccHHHHHHHHHHHHHHCCCeEEEEECCCCCC
Confidence 3344444 34688888999999999999999999997765443
No 63
>3igf_A ALL4481 protein; two-domained protein consisting of the N-terminal alpha-beta the C-terminal all beta domain., structural genomics; 2.00A {Nostoc SP}
Probab=86.00 E-value=2.6 Score=40.52 Aligned_cols=40 Identities=15% Similarity=-0.016 Sum_probs=33.3
Q ss_pred CcEEEEEcC-CCccCHHHHHHHHHHHHhCCCeEEEEeCCcch
Q 011789 8 KPHAIFISY-PLQGHVNPSVQLALKLASQGFTITFVNTHFIH 48 (477)
Q Consensus 8 ~~~il~~~~-~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~ 48 (477)
||+|+|++. |+.|-..-...||..|+++|++|.++.. ...
T Consensus 1 M~~i~~~~gkGG~GKTt~a~~la~~la~~g~~vllvd~-~~~ 41 (374)
T 3igf_A 1 MALILTFLGKSGVARTKIAIAAAKLLASQGKRVLLAGL-AEP 41 (374)
T ss_dssp -CEEEEEECSBHHHHHHHHHHHHHHHHHTTCCEEEEEC-SCS
T ss_pred CcEEEEEeCCCCCcHHHHHHHHHHHHHHCCCCeEEEeC-CCC
Confidence 688887766 6778888899999999999999999988 443
No 64
>1g5t_A COB(I)alamin adenosyltransferase; P-loop protein, cobalamin biosynthesis, RECA fold; HET: ATP; 1.80A {Salmonella typhimurium} SCOP: c.37.1.11 PDB: 1g5r_A* 1g64_A*
Probab=84.80 E-value=6.5 Score=33.85 Aligned_cols=98 Identities=10% Similarity=0.116 Sum_probs=61.4
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCcc-----h-hhhccCCCCCCccccccccCCCCCeEEEecCC
Q 011789 7 QKPHAIFISYPLQGHVNPSVQLALKLASQGFTITFVNTHFI-----H-QQMTKASPEMGSDIFAGVRKSGLDIRYMTLSD 80 (477)
Q Consensus 7 ~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~-----~-~~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~ 80 (477)
.+-.|++++..+.|=..-.+.+|.+.+.+|++|.|+..-.. + ..+.. + ++++.....
T Consensus 27 ~~g~i~v~tG~GkGKTTaA~GlalRA~g~G~rV~~vQF~Kg~~~~gE~~~l~~---------------L--~v~~~~~g~ 89 (196)
T 1g5t_A 27 ERGIIIVFTGNGKGKTTAAFGTAARAVGHGKNVGVVQFIKGTWPNGERNLLEP---------------H--GVEFQVMAT 89 (196)
T ss_dssp CCCCEEEEESSSSCHHHHHHHHHHHHHHTTCCEEEEESSCCSSCCHHHHHHGG---------------G--TCEEEECCT
T ss_pred cCceEEEECCCCCCHHHHHHHHHHHHHHCCCeEEEEEeeCCCCCccHHHHHHh---------------C--CcEEEEccc
Confidence 44578888998999999999999999999999999954432 1 11222 1 366666665
Q ss_pred CCCCCCCCCCcHHHHHHHHHHHhHHHHHHHHHHhHhcCCCccEEEecCCC
Q 011789 81 GLPLGFDRSLNHEQFMSSLLHVFSAHAEEVIGQIVRSGENVHCLIADTYF 130 (477)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~pD~iI~D~~~ 130 (477)
++.- . ...... . .......+....+.+.. .++|+||.|-+.
T Consensus 90 gf~~--~-~~~~~~---~-~~~a~~~l~~a~~~l~~--~~yDlvILDEi~ 130 (196)
T 1g5t_A 90 GFTW--E-TQNREA---D-TAACMAVWQHGKRMLAD--PLLDMVVLDELT 130 (196)
T ss_dssp TCCC--C-GGGHHH---H-HHHHHHHHHHHHHHTTC--TTCSEEEEETHH
T ss_pred cccc--C-CCCcHH---H-HHHHHHHHHHHHHHHhc--CCCCEEEEeCCC
Confidence 4431 1 111111 1 12224445555555544 389999999754
No 65
>2wqk_A 5'-nucleotidase SURE; SURE protein, putative acid phosphatase, structural genomics, 3-D structure, mixed alpha/beta protein, NPPSFA; 1.50A {Aquifex aeolicus}
Probab=84.28 E-value=3.8 Score=36.87 Aligned_cols=114 Identities=9% Similarity=0.030 Sum_probs=60.4
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCcchhhhccCCCCCCccccccccCCCCCeEEEecCCCCCCCCC
Q 011789 8 KPHAIFISYPLQGHVNPSVQLALKLASQGFTITFVNTHFIHQQMTKASPEMGSDIFAGVRKSGLDIRYMTLSDGLPLGFD 87 (477)
Q Consensus 8 ~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 87 (477)
|.|||+.-=-+. +.-=+..|+++|.+.| +|+++.+...+.-+.... ++...+++..+..... ..
T Consensus 1 Mp~ILlTNDDGi-~apGi~~L~~~l~~~g-~V~VvAP~~~~Sg~g~si------------T~~~pl~~~~~~~~~~--~~ 64 (251)
T 2wqk_A 1 MPTFLLVNDDGY-FSPGINALREALKSLG-RVVVVAPDRNLSGVGHSL------------TFTEPLKMRKIDTDFY--TV 64 (251)
T ss_dssp -CEEEEECSSCT-TCHHHHHHHHHHTTTS-EEEEEEESSCCTTSCCSC------------CCSSCEEEEEEETTEE--EE
T ss_pred CCEEEEEcCCCC-CcHHHHHHHHHHHhCC-CEEEEeeCCCCcccccCc------------CCCCCceeEEeeccce--ee
Confidence 567766543332 2233677899999998 588888777765553211 2222455555442110 01
Q ss_pred CCCcHHHHHHHHHHHhHHHHHHHHHHhHhcCCCccEEEecC----------CCc---chHHHHHHhCCceEEEec
Q 011789 88 RSLNHEQFMSSLLHVFSAHAEEVIGQIVRSGENVHCLIADT----------YFV---WPSKLAKKFGLYYISFWT 149 (477)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~pD~iI~D~----------~~~---~~~~~A~~~gIP~v~~~~ 149 (477)
..+.+.+ |-.+ . +..++. + .+||+||+.. ++. ++..-|..+|||.|.++.
T Consensus 65 v~GTPaD-CV~l-a-----l~~~l~---~--~~PDLVvSGIN~G~N~g~dv~ySGTVgAA~Ea~~~GipaIA~S~ 127 (251)
T 2wqk_A 65 IDGTPAD-CVHL-G-----YRVILE---E--KKPDLVLSGINEGPNLGEDITYSGTVSGAMEGRILGIPSIAFSA 127 (251)
T ss_dssp TTCCHHH-HHHH-H-----HHTTTT---T--CCCSEEEEEEESSCCCGGGGGGCHHHHHHHHHHHTTCCEEEEEE
T ss_pred cCCChHH-HHhh-h-----hhhhcC---C--CCCCEEEeCccCCCccccceecchHHHHHHHHHhcCCCeEEEEc
Confidence 1122222 2222 1 122222 2 3899999843 222 344456788999999953
No 66
>1uqt_A Alpha, alpha-trehalose-phosphate synthase; glycosyltransferase, transferase; HET: U2F; 2.0A {Escherichia coli} SCOP: c.87.1.6 PDB: 1uqu_A* 2wtx_A* 1gz5_A*
Probab=84.05 E-value=6.1 Score=39.40 Aligned_cols=109 Identities=12% Similarity=0.037 Sum_probs=67.7
Q ss_pred eEE-EeeccHHH---hhccCCCCcccc---ccCCc-hhhHHHhcCc-----ceeccccccchhhHHHHHHhhhcceeeec
Q 011789 343 SMI-ITWCCQTS---VLAHPAIGGFLT---HCGWN-SVLEGLWCGV-----PLLCFPLYTDQFTNRKLAVDDWNVGLNLS 409 (477)
Q Consensus 343 v~v-~~~~p~~~---lL~~~~~~~~It---HgG~g-s~~eal~~Gv-----P~v~~P~~~DQ~~na~~v~~~~G~G~~~~ 409 (477)
|.. .+++|+.+ ++..+++ ||. .=|+| ++.||+++|+ |+|+--..+ .+..+ .-|+.+
T Consensus 333 v~~~~g~v~~~el~~ly~~ADv--~v~pS~~EGfgLv~lEAmA~g~~~~~gpvV~S~~~G----~~~~l----~~g~lv- 401 (482)
T 1uqt_A 333 LYYLNQHFDRKLLMKIFRYSDV--GLVTPLRDGMNLVAKEYVAAQDPANPGVLVLSQFAG----AANEL----TSALIV- 401 (482)
T ss_dssp EEEECSCCCHHHHHHHHHHCSE--EEECCSSBSCCHHHHHHHHHSCTTSCCEEEEETTBG----GGGTC----TTSEEE-
T ss_pred EEEeCCCCCHHHHHHHHHHccE--EEECCCcccCCchHHHHHHhCCCCCCCCEEEECCCC----CHHHh----CCeEEE-
Confidence 454 46788775 7888888 553 44675 7899999998 666644322 11111 235566
Q ss_pred CCCCcCHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHh
Q 011789 410 NEKVITKEEVSKNVHLLMGEKSGAKYRNAAKQVKKAMEYALQPNGSSDKNMDQFIKDLKTR 470 (477)
Q Consensus 410 ~~~~~~~~~l~~~i~~~l~~~~~~~~~~~a~~l~~~~~~~~~~gg~~~~~~~~~~~~~~~~ 470 (477)
...+.+.++++|.++|+++.. .-+++.++..+.++. -+...-.+++++.+++.
T Consensus 402 --~p~d~~~lA~ai~~lL~~~~~-~r~~~~~~~~~~v~~-----~s~~~~a~~~l~~l~~~ 454 (482)
T 1uqt_A 402 --NPYDRDEVAAALDRALTMSLA-ERISRHAEMLDVIVK-----NDINHWQECFISDLKQI 454 (482)
T ss_dssp --CTTCHHHHHHHHHHHHTCCHH-HHHHHHHHHHHHHHH-----TCHHHHHHHHHHHHHHS
T ss_pred --CCCCHHHHHHHHHHHHcCCHH-HHHHHHHHHHHHHHh-----CCHHHHHHHHHHHHHhc
Confidence 345889999999999986511 123333334343332 35667777888877654
No 67
>3dfu_A Uncharacterized protein from 6-phosphogluconate dehydrogenase-like family; putative rossmann-like dehydrogenase, structural genomics; HET: MSE; 2.07A {Corynebacterium glutamicum}
Probab=83.15 E-value=3.4 Score=36.74 Aligned_cols=37 Identities=16% Similarity=0.118 Sum_probs=30.9
Q ss_pred CCCCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 011789 4 NKTQKPHAIFISYPLQGHVNPSVQLALKLASQGFTITFVNTH 45 (477)
Q Consensus 4 ~~~~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 45 (477)
|...+|||.|+-.|..|- .||+.|.++||+|+.+..+
T Consensus 2 ~~~~~mkI~IIG~G~~G~-----sLA~~L~~~G~~V~~~~~~ 38 (232)
T 3dfu_A 2 MQAPRLRVGIFDDGSSTV-----NMAEKLDSVGHYVTVLHAP 38 (232)
T ss_dssp -CCCCCEEEEECCSCCCS-----CHHHHHHHTTCEEEECSSG
T ss_pred CCCCCcEEEEEeeCHHHH-----HHHHHHHHCCCEEEEecCH
Confidence 456779999999998884 5899999999999987764
No 68
>3zqu_A Probable aromatic acid decarboxylase; lyase; HET: FNR; 1.50A {Pseudomonas aeruginosa} SCOP: c.34.1.0
Probab=82.02 E-value=1.8 Score=37.88 Aligned_cols=45 Identities=11% Similarity=0.066 Sum_probs=40.3
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCcchhhh
Q 011789 6 TQKPHAIFISYPLQGHVNPSVQLALKLASQGFTITFVNTHFIHQQM 51 (477)
Q Consensus 6 ~~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~~ 51 (477)
.+++||++--.|+.|-+. ...|.+.|.++|++|.++.++.....+
T Consensus 2 ~~~k~IllgvTGaiaa~k-~~~ll~~L~~~g~eV~vv~T~~A~~fi 46 (209)
T 3zqu_A 2 SGPERITLAMTGASGAQY-GLRLLDCLVQEEREVHFLISKAAQLVM 46 (209)
T ss_dssp CSCSEEEEEECSSSCHHH-HHHHHHHHHHTTCEEEEEECHHHHHHH
T ss_pred CCCCEEEEEEECHHHHHH-HHHHHHHHHHCCCEEEEEECccHHHHH
Confidence 345899999999988777 899999999999999999999988887
No 69
>3t5t_A Putative glycosyltransferase; GTB fold, pseudoglycosyltransferase; 1.70A {Streptomyces hygroscopicus} PDB: 4f97_A* 4f96_B* 4f9f_A* 3t7d_A*
Probab=81.86 E-value=12 Score=37.34 Aligned_cols=111 Identities=8% Similarity=0.007 Sum_probs=70.6
Q ss_pred CeEEEeeccHHH---hhccCCCCcccc---ccCCch-hhHHHhcC---cceeccccccchhhHHHHHHhhhcceeeecCC
Q 011789 342 RSMIITWCCQTS---VLAHPAIGGFLT---HCGWNS-VLEGLWCG---VPLLCFPLYTDQFTNRKLAVDDWNVGLNLSNE 411 (477)
Q Consensus 342 nv~v~~~~p~~~---lL~~~~~~~~It---HgG~gs-~~eal~~G---vP~v~~P~~~DQ~~na~~v~~~~G~G~~~~~~ 411 (477)
.|+....+|+.+ ++..+++ ||. .=|+|. ..|++++| .|+|+--+. ..+..+. .-|+.+
T Consensus 353 ~V~f~g~v~~~el~aly~~ADv--~vv~SlrEGfgLv~~EamA~~~~~g~lVlSe~a----Ga~~~l~---~~allV--- 420 (496)
T 3t5t_A 353 TVRIDNDNDVNHTIACFRRADL--LIFNSTVDGQNLSTFEAPLVNERDADVILSETC----GAAEVLG---EYCRSV--- 420 (496)
T ss_dssp SEEEEECCCHHHHHHHHHHCSE--EEECCSSBSCCSHHHHHHHHCSSCCEEEEETTB----TTHHHHG---GGSEEE---
T ss_pred CEEEeCCCCHHHHHHHHHhccE--EEECcccccCChhHHHHHHhCCCCCCEEEeCCC----CCHHHhC---CCEEEE---
Confidence 577777888754 7778887 442 468885 58999996 565554332 2233231 136777
Q ss_pred CCcCHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHh
Q 011789 412 KVITKEEVSKNVHLLMGEKSGAKYRNAAKQVKKAMEYALQPNGSSDKNMDQFIKDLKTR 470 (477)
Q Consensus 412 ~~~~~~~l~~~i~~~l~~~~~~~~~~~a~~l~~~~~~~~~~gg~~~~~~~~~~~~~~~~ 470 (477)
...+.+.++++|.++|+++.. +-+++.+++.+.+. .-....-.+.|++.|.+.
T Consensus 421 nP~D~~~lA~AI~~aL~m~~~-er~~r~~~~~~~V~-----~~d~~~W~~~fl~~L~~~ 473 (496)
T 3t5t_A 421 NPFDLVEQAEAISAALAAGPR-QRAEAAARRRDAAR-----PWTLEAWVQAQLDGLAAD 473 (496)
T ss_dssp CTTBHHHHHHHHHHHHHCCHH-HHHHHHHHHHHHHT-----TCBHHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHcCCHH-HHHHHHHHHHHHHH-----HCCHHHHHHHHHHHHhhc
Confidence 456899999999999987611 23333344444433 346667788888888643
No 70
>3iqw_A Tail-anchored protein targeting factor GET3; ATPase, Zn binding, protein transport; HET: ANP; 3.00A {Chaetomium thermophilum} PDB: 3iqx_A* 3ibg_A*
Probab=81.39 E-value=9.6 Score=35.89 Aligned_cols=43 Identities=23% Similarity=0.265 Sum_probs=35.6
Q ss_pred CCcEEEEEcC-CCccCHHHHHHHHHHHHhCCCeEEEEeCCcchh
Q 011789 7 QKPHAIFISY-PLQGHVNPSVQLALKLASQGFTITFVNTHFIHQ 49 (477)
Q Consensus 7 ~~~~il~~~~-~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~ 49 (477)
.+++|+|++. |+.|=..-...||..|+++|++|.++.......
T Consensus 14 ~~~~i~~~sgkGGvGKTt~a~~lA~~la~~g~~vllid~D~~~~ 57 (334)
T 3iqw_A 14 RSLRWIFVGGKGGVGKTTTSCSLAIQLAKVRRSVLLLSTDPAHN 57 (334)
T ss_dssp TTCCEEEEECSTTSSHHHHHHHHHHHHTTSSSCEEEEECCSSCH
T ss_pred CCeEEEEEeCCCCccHHHHHHHHHHHHHhCCCcEEEEECCCCCC
Confidence 4466766655 788999999999999999999999999886543
No 71
>1l5x_A SurviVal protein E; structural genomics, putative acid phosphatase, mixed alpha/ protein, N-terminal rossmann-fold like; 2.00A {Pyrobaculum aerophilum} SCOP: c.106.1.1
Probab=81.13 E-value=10 Score=34.63 Aligned_cols=113 Identities=8% Similarity=-0.088 Sum_probs=61.5
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCcchhhhccCCCCCCccccccccCCCCCeEEEecCCCCCCCCCC
Q 011789 9 PHAIFISYPLQGHVNPSVQLALKLASQGFTITFVNTHFIHQQMTKASPEMGSDIFAGVRKSGLDIRYMTLSDGLPLGFDR 88 (477)
Q Consensus 9 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 88 (477)
||||+.-=-+. +.-=+..|+++|.+.| +|+++.+...+.-+.... ++...+++..++.+-.....-
T Consensus 1 M~ILlTNDDGi-~ApGi~aL~~aL~~~g-~V~VVAP~~~qSg~g~si------------Tl~~pl~~~~~~~~~~~~~~v 66 (280)
T 1l5x_A 1 MKILVTNDDGV-HSPGLRLLYQFALSLG-DVDVVAPESPKSATGLGI------------TLHKPLRMYEVDLCGFRAIAT 66 (280)
T ss_dssp CEEEEECSSCT-TCHHHHHHHHHHGGGS-EEEEEEESSCTTTSCSSC------------CCSSCBCEEEEECSSSEEEEE
T ss_pred CeEEEEcCCCC-CcHhHHHHHHHHHhCC-CEEEEecCCCCcCCcccc------------cCCCCeEEEEeccCCCceEEE
Confidence 46655543333 2233778899999988 999999988877663311 122245555443210001112
Q ss_pred CCcHHHHHHHHHHHhHHHHHHHHHHhHhcCCCccEEEecC-----------CCc---chHHHHHHhCCceEEEec
Q 011789 89 SLNHEQFMSSLLHVFSAHAEEVIGQIVRSGENVHCLIADT-----------YFV---WPSKLAKKFGLYYISFWT 149 (477)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~pD~iI~D~-----------~~~---~~~~~A~~~gIP~v~~~~ 149 (477)
.+.+.+-...- +..+ . .+||+||+.. ++. ++..-|..+|||.|.++.
T Consensus 67 ~GTPaDCV~la-------l~~l-----~--~~PDLVvSGIN~G~Nlg~d~v~ySGTVgAA~Ea~~~GiPaIA~S~ 127 (280)
T 1l5x_A 67 SGTPSDTVYLA-------TFGL-----G--RKYDIVLSGINLGDNTSLQVILSSGTLGAAFQAALLGIPALAYSA 127 (280)
T ss_dssp SSCHHHHHHHH-------HHHH-----T--SCCSEEEEEEEEBCCCSHHHHTTCHHHHHHHHHHHTTCCEEEEEE
T ss_pred CCcHHHHHHHH-------HhcC-----C--CCCCEEEECCccCCcCCccccccchhHHHHHHHHHcCCCeEEEEc
Confidence 23333322222 2222 2 2999999642 222 233345779999999965
No 72
>2ejb_A Probable aromatic acid decarboxylase; phenylacrylic acid decarboxylase, X-RAY diffraction, structural genomics, NPPSFA; 2.15A {Aquifex aeolicus}
Probab=81.10 E-value=2.2 Score=36.66 Aligned_cols=43 Identities=12% Similarity=0.131 Sum_probs=38.5
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCcchhhh
Q 011789 8 KPHAIFISYPLQGHVNPSVQLALKLASQGFTITFVNTHFIHQQM 51 (477)
Q Consensus 8 ~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~~ 51 (477)
|+||++.-.|+.|-+ =...|.++|.++|++|.++.++.....+
T Consensus 1 mk~IllgvTGs~aa~-k~~~l~~~L~~~g~~V~vv~T~~A~~~i 43 (189)
T 2ejb_A 1 MQKIALCITGASGVI-YGIKLLQVLEELDFSVDLVISRNAKVVL 43 (189)
T ss_dssp CCEEEEEECSSTTHH-HHHHHHHHHHHTTCEEEEEECHHHHHHH
T ss_pred CCEEEEEEECHHHHH-HHHHHHHHHHHCCCEEEEEEChhHHHHh
Confidence 579999999998854 6899999999999999999999988888
No 73
>1j9j_A Stationary phase surviVal protein; SURE protein, unknown function; 1.90A {Thermotoga maritima} SCOP: c.106.1.1 PDB: 1ilv_A 1j9k_A* 1j9l_A*
Probab=80.82 E-value=7.2 Score=34.93 Aligned_cols=114 Identities=6% Similarity=-0.016 Sum_probs=61.7
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCcchhhhccCCCCCCccccccccCCCCCeEEEecCCCCC-CCCC
Q 011789 9 PHAIFISYPLQGHVNPSVQLALKLASQGFTITFVNTHFIHQQMTKASPEMGSDIFAGVRKSGLDIRYMTLSDGLP-LGFD 87 (477)
Q Consensus 9 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~ 87 (477)
||||+.-=-+. |.-=+..|+++|++.| +|+++.+...+.-+.... ++...+++..++.+-. ....
T Consensus 1 M~ILlTNDDGi-~apGi~aL~~~l~~~g-~V~VVAP~~~~Sg~g~si------------Tl~~pl~~~~~~~~~~~~~~~ 66 (247)
T 1j9j_A 1 MRILVTNDDGI-QSKGIIVLAELLSEEH-EVFVVAPDKERSATGHSI------------TIHVPLWMKKVFISERVVAYS 66 (247)
T ss_dssp CEEEEECSSCT-TCHHHHHHHHHHTTTS-EEEEEEESSCCTTCTTCC------------CCSSCCCEEECCCSSSEEEEE
T ss_pred CeEEEEcCCCC-CcHhHHHHHHHHHhCC-CEEEEecCCCCcCCcccc------------cCCCCeEEEEeccCCCCceEE
Confidence 46655543332 2333778899999988 899999988876663311 1222455555543200 0111
Q ss_pred CCCcHHHHHHHHHHHhHHHHHHHHHHhHhcCCCccEEEecC----------CCc---chHHHHHHhCCceEEEec
Q 011789 88 RSLNHEQFMSSLLHVFSAHAEEVIGQIVRSGENVHCLIADT----------YFV---WPSKLAKKFGLYYISFWT 149 (477)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~pD~iI~D~----------~~~---~~~~~A~~~gIP~v~~~~ 149 (477)
-.+.+.+-...- +..++ . .+||+||+.. ++. ++..-|..+|||.|.++.
T Consensus 67 v~GTPaDCV~la-------l~~l~----~--~~PDLVvSGIN~G~Nlg~dv~ySGTVgAA~Ea~~~GiPaIA~S~ 128 (247)
T 1j9j_A 67 TTGTPADCVKLA-------YNVVM----D--KRVDLIVSGVNRGPNMGMDILHSGTVSGAMEGAMMNIPSIAISS 128 (247)
T ss_dssp ESSCHHHHHHHH-------HHTTS----T--TCCSEEEEEEEESCCCGGGGGGCHHHHHHHHHHHTTCCEEEEEE
T ss_pred ECCcHHHHHHHH-------HHhhc----c--CCCCEEEECCccCCCCCcCeecchhHHHHHHHHhcCCCeEEEec
Confidence 122322222211 12222 2 2899999743 222 234455779999999954
No 74
>2vqe_B 30S ribosomal protein S2; tRNA-binding, rRNA-binding, metal-binding, zinc-finger, translation; HET: TM2 PAR; 2.5A {Thermus thermophilus} SCOP: c.23.15.1 PDB: 1gix_E* 1hnw_B* 1hnx_B* 1hnz_B* 1hr0_B 1ibk_B* 1ibl_B* 1ibm_B 1j5e_B 1jgo_E* 1jgp_E* 1jgq_E* 1ml5_E* 1n32_B* 1n33_B* 1n34_B 1n36_B 1xmo_B* 1xmq_B* 1xnq_B* ...
Probab=80.32 E-value=7.6 Score=34.87 Aligned_cols=33 Identities=12% Similarity=0.034 Sum_probs=25.1
Q ss_pred CCccEEE-ecCCCc-chHHHHHHhCCceEEEecch
Q 011789 119 ENVHCLI-ADTYFV-WPSKLAKKFGLYYISFWTES 151 (477)
Q Consensus 119 ~~pD~iI-~D~~~~-~~~~~A~~~gIP~v~~~~~~ 151 (477)
..||+|| +|+..- .+..=|.++|||.|.+.-+.
T Consensus 157 ~~Pdll~V~Dp~~e~~Ai~EA~~l~IPvIaivDTn 191 (256)
T 2vqe_B 157 RLPDAIFVVDPTKEAIAVREARKLFIPVIALADTD 191 (256)
T ss_dssp SCCSEEEESCTTTTHHHHHHHHHTTCCCEECCCTT
T ss_pred cCCCEEEEeCCccchHHHHHHHHcCCCEEEEecCC
Confidence 4899877 565433 67888999999999985543
No 75
>2ywr_A Phosphoribosylglycinamide formyltransferase; rossmann fold, structural genomics, NPPSFA; 1.77A {Aquifex aeolicus}
Probab=79.49 E-value=17 Score=31.67 Aligned_cols=35 Identities=9% Similarity=-0.064 Sum_probs=24.8
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhCCC--eEEEEeCC
Q 011789 8 KPHAIFISYPLQGHVNPSVQLALKLASQGF--TITFVNTH 45 (477)
Q Consensus 8 ~~~il~~~~~~~GH~~p~l~La~~L~~rGh--~Vt~~~~~ 45 (477)
||||+|+.+|+.. -+.++.++|.+.+| +|..+.+.
T Consensus 1 m~rI~vl~SG~g~---~~~~~l~~l~~~~~~~~i~~Vvs~ 37 (216)
T 2ywr_A 1 MLKIGVLVSGRGS---NLQAIIDAIESGKVNASIELVISD 37 (216)
T ss_dssp CEEEEEEECSCCH---HHHHHHHHHHTTSSCEEEEEEEES
T ss_pred CCEEEEEEeCCcH---HHHHHHHHHHhCCCCCeEEEEEeC
Confidence 6899999777653 36667778888888 77655443
No 76
>3nb0_A Glycogen [starch] synthase isoform 2; glycogen synthase, glucose-6-phosphate, yeast, allosteric AC transferase; HET: G6P; 2.41A {Saccharomyces cerevisiae} PDB: 3rt1_A* 3nch_A 3naz_A 3o3c_A* 3rsz_A*
Probab=79.18 E-value=6.5 Score=40.78 Aligned_cols=45 Identities=18% Similarity=0.202 Sum_probs=31.8
Q ss_pred CCeEEE---eeccHH---------HhhccCCCCcccc---ccCCc-hhhHHHhcCcceecccc
Q 011789 341 DRSMII---TWCCQT---------SVLAHPAIGGFLT---HCGWN-SVLEGLWCGVPLLCFPL 387 (477)
Q Consensus 341 ~nv~v~---~~~p~~---------~lL~~~~~~~~It---HgG~g-s~~eal~~GvP~v~~P~ 387 (477)
++|.|+ .|++.. ++++.+++ ||. +=|+| +.+||+++|+|+|+.-.
T Consensus 490 drVKVIf~P~~L~~~d~lf~~d~~~~~~~adv--fV~PS~~EgfGl~~LEAmA~G~PvI~s~~ 550 (725)
T 3nb0_A 490 DRVKMIFHPEFLNANNPILGLDYDEFVRGCHL--GVFPSYYEPWGYTPAECTVMGVPSITTNV 550 (725)
T ss_dssp CSEEEEECCSCCCTTCSSSCCCHHHHHHHCSE--EECCCSSBSSCHHHHHHHHTTCCEEEETT
T ss_pred CceeEEEeccccCCCCccchhHHHHHHhhceE--EEeccccCCCCHHHHHHHHcCCCEEEeCC
Confidence 445443 488763 57888998 553 34554 89999999999998543
No 77
>2e6c_A 5'-nucleotidase SURE; SURE protein, cowith manganese ION and AMP hydrolase; 2.05A {Thermus thermophilus} PDB: 2e6b_A 2e69_A 2e6e_A 2e6g_A 2e6h_A
Probab=79.10 E-value=10 Score=33.86 Aligned_cols=112 Identities=11% Similarity=0.002 Sum_probs=62.6
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCcchhhhccCCCCCCccccccccCCCCCeEEEecCCCCC----C
Q 011789 9 PHAIFISYPLQGHVNPSVQLALKLASQGFTITFVNTHFIHQQMTKASPEMGSDIFAGVRKSGLDIRYMTLSDGLP----L 84 (477)
Q Consensus 9 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~----~ 84 (477)
||||+.-=-+. |.-=+..|+++|.+.| +|+++.+...+.-+.... ++...+++..++.+.+ .
T Consensus 1 M~ILlTNDDGi-~apGi~aL~~~l~~~g-~V~VVAP~~~~Sg~g~si------------Tl~~pl~~~~~~~~~~~~~~~ 66 (244)
T 2e6c_A 1 MRILVTNDDGI-YSPGLWALAEAASQFG-EVFVAAPDTEQSAAGHAI------------TIAHPVRAYPHPSPLHAPHFP 66 (244)
T ss_dssp CEEEEECSSCT-TCHHHHHHHHHHTTTS-EEEEEEECSSCCCCCSSC------------CCSSCBEEEECCCCTTSCCCC
T ss_pred CeEEEEcCCCC-CcHhHHHHHHHHHhCC-CEEEEecCCCCcCCcccc------------cCCCCeEEEEeccCcCCCCCc
Confidence 46665543333 2233778899999988 899999888876663211 2223667777654210 1
Q ss_pred CCCCCCcHHHHHHHHHHHhHHHHHHHHHHhHhcCCCccEEEecC----------CCc---chHHHHHHhCCceEEEec
Q 011789 85 GFDRSLNHEQFMSSLLHVFSAHAEEVIGQIVRSGENVHCLIADT----------YFV---WPSKLAKKFGLYYISFWT 149 (477)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~pD~iI~D~----------~~~---~~~~~A~~~gIP~v~~~~ 149 (477)
...-.+.+.+-...- +. + . .+||+||+.. ++. ++..-|..+|||.|.++.
T Consensus 67 ~~~v~GTPaDCV~la-------l~-----l-~--~~PDLVvSGIN~G~Nlg~dv~ySGTVgAA~Ea~~~GiPaIA~S~ 129 (244)
T 2e6c_A 67 AYRVRGTPADCVALG-------LH-----L-F--GPVDLVLSGVNLGSNLGHEIWHSGTVAAAKQGYLFGLSAAAFSV 129 (244)
T ss_dssp EEEEESCHHHHHHHH-------HH-----H-S--CSCCEEEEEEEESCCCGGGGGGCHHHHHHHHHHHTTCEEEEEEE
T ss_pred eEEEcCcHHHHHHHH-------Hc-----C-C--CCCCEEEECCccCCCCCcCeechHhHHHHHHHHhcCCCeEEEec
Confidence 111123332222211 11 2 2 2899999743 222 234445779999999954
No 78
>3auf_A Glycinamide ribonucleotide transformylase 1; structural genomics, riken structural genomics/proteomics in RSGI, rossmann fold; 2.07A {Symbiobacterium toebii}
Probab=77.86 E-value=32 Score=30.25 Aligned_cols=103 Identities=8% Similarity=0.013 Sum_probs=59.2
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHhC--CCeEEEEeCC-cch---hhh-ccCCCCCCccccccccCCCCCeEEEec
Q 011789 6 TQKPHAIFISYPLQGHVNPSVQLALKLASQ--GFTITFVNTH-FIH---QQM-TKASPEMGSDIFAGVRKSGLDIRYMTL 78 (477)
Q Consensus 6 ~~~~~il~~~~~~~GH~~p~l~La~~L~~r--Gh~Vt~~~~~-~~~---~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~l 78 (477)
..||||+|+.+|+.. -+.++.++|.+. +++|..+.+. ... +.. .. ++.+..+
T Consensus 20 ~~~~rI~~l~SG~g~---~~~~~l~~l~~~~~~~~I~~Vvt~~~~~~~~~~A~~~------------------gIp~~~~ 78 (229)
T 3auf_A 20 GHMIRIGVLISGSGT---NLQAILDGCREGRIPGRVAVVISDRADAYGLERARRA------------------GVDALHM 78 (229)
T ss_dssp TTCEEEEEEESSCCH---HHHHHHHHHHTTSSSEEEEEEEESSTTCHHHHHHHHT------------------TCEEEEC
T ss_pred CCCcEEEEEEeCCcH---HHHHHHHHHHhCCCCCeEEEEEcCCCchHHHHHHHHc------------------CCCEEEE
Confidence 567899999877743 366777788876 6788665544 222 222 23 6666655
Q ss_pred CCC-CCCCCCCCCcHHHHHHHHHHHhHHHHHHHHHHhHhcCCCccEEEecCCCc-chHHHHHHhCCceEEEec
Q 011789 79 SDG-LPLGFDRSLNHEQFMSSLLHVFSAHAEEVIGQIVRSGENVHCLIADTYFV-WPSKLAKKFGLYYISFWT 149 (477)
Q Consensus 79 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~pD~iI~D~~~~-~~~~~A~~~gIP~v~~~~ 149 (477)
+.. +. +- ....+.+.+.++.+ +||+||+-.+.. -...+-+.....++=+.+
T Consensus 79 ~~~~~~-------~r--------~~~~~~~~~~l~~~-----~~Dliv~agy~~IL~~~~l~~~~~~~iNiHp 131 (229)
T 3auf_A 79 DPAAYP-------SR--------TAFDAALAERLQAY-----GVDLVCLAGYMRLVRGPMLTAFPNRILNIHP 131 (229)
T ss_dssp CGGGSS-------SH--------HHHHHHHHHHHHHT-----TCSEEEESSCCSCCCHHHHHHSTTCEEEEES
T ss_pred Cccccc-------ch--------hhccHHHHHHHHhc-----CCCEEEEcChhHhCCHHHHhhccCCEEEEcc
Confidence 421 11 10 11122233444444 999999876644 455566666666666633
No 79
>3qjg_A Epidermin biosynthesis protein EPID; structural genomics, center for structural genomics of infec diseases, csgid, oxidoreductase; HET: FMN; 2.04A {Staphylococcus aureus} SCOP: c.34.1.0
Probab=76.85 E-value=3.6 Score=34.79 Aligned_cols=42 Identities=7% Similarity=0.034 Sum_probs=36.9
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCcchhhh
Q 011789 9 PHAIFISYPLQGHVNPSVQLALKLASQGFTITFVNTHFIHQQM 51 (477)
Q Consensus 9 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~~ 51 (477)
+||++.-.|+.|=+. ...|.+.|+++|++|.++.++...+.+
T Consensus 6 k~IllgvTGs~aa~k-~~~ll~~L~~~g~~V~vv~T~~A~~fi 47 (175)
T 3qjg_A 6 ENVLICLCGSVNSIN-ISHYIIELKSKFDEVNVIASTNGRKFI 47 (175)
T ss_dssp CEEEEEECSSGGGGG-HHHHHHHHTTTCSEEEEEECTGGGGGS
T ss_pred CEEEEEEeCHHHHHH-HHHHHHHHHHCCCEEEEEECcCHHHHh
Confidence 689888888877665 899999999999999999999888776
No 80
>3lqk_A Dipicolinate synthase subunit B; flavoprotein, PSI2, MCSG, structural protein structure initiative, midwest center for structural genomics; 2.10A {Bacillus halodurans}
Probab=76.64 E-value=3 Score=36.21 Aligned_cols=46 Identities=15% Similarity=0.010 Sum_probs=38.4
Q ss_pred CCCCcEEEEEcCCCccCHH-HHHHHHHHHHhCCCeEEEEeCCcchhhh
Q 011789 5 KTQKPHAIFISYPLQGHVN-PSVQLALKLASQGFTITFVNTHFIHQQM 51 (477)
Q Consensus 5 ~~~~~~il~~~~~~~GH~~-p~l~La~~L~~rGh~Vt~~~~~~~~~~~ 51 (477)
.-+++||++--.|+ +..+ -.+.|.+.|+++|++|.++.++...+.+
T Consensus 4 ~l~~k~I~lgiTGs-~aa~~k~~~ll~~L~~~g~eV~vv~T~~A~~~i 50 (201)
T 3lqk_A 4 NFAGKHVGFGLTGS-HCTYHEVLPQMERLVELGAKVTPFVTHTVQTTD 50 (201)
T ss_dssp CCTTCEEEEECCSC-GGGGGGTHHHHHHHHHTTCEEEEECSSCSCCTT
T ss_pred CcCCCEEEEEEECh-HHHHHHHHHHHHHHhhCCCEEEEEEChhHHHHH
Confidence 34567999988888 5555 7999999999999999999998887665
No 81
>3qxc_A Dethiobiotin synthetase; DTBS, structural genomics, ATP BIND biology, protein structure initiative, midwest center for S genomics, MCSG; HET: ATP; 1.34A {Helicobacter pylori} PDB: 3mle_A* 3qxh_A* 3qxj_A* 3qxs_A* 3qxx_A* 3qy0_A* 2qmo_A
Probab=76.09 E-value=6.7 Score=35.08 Aligned_cols=37 Identities=22% Similarity=0.205 Sum_probs=30.3
Q ss_pred CCCcEEEEEcCC--CccCHHHHHHHHHHHHhCCCeEEEE
Q 011789 6 TQKPHAIFISYP--LQGHVNPSVQLALKLASQGFTITFV 42 (477)
Q Consensus 6 ~~~~~il~~~~~--~~GH~~p~l~La~~L~~rGh~Vt~~ 42 (477)
..|++.+|++.. .-|=..-.+.|++.|+++|++|.++
T Consensus 18 ~~m~k~i~ItgT~t~vGKT~vs~gL~~~L~~~G~~V~~f 56 (242)
T 3qxc_A 18 YFQGHMLFISATNTNAGKTTCARLLAQYCNACGVKTILL 56 (242)
T ss_dssp -CCCEEEEEEESSTTSSHHHHHHHHHHHHHHTTCCEEEE
T ss_pred hhcCcEEEEEeCCCCCcHHHHHHHHHHHHHhCCCceEEE
Confidence 367787777764 5578888899999999999999997
No 82
>1sbz_A Probable aromatic acid decarboxylase; FMN binding, PAD1, UBIX, montreal-kingston bacterial structu genomics initiative, BSGI; HET: FMN; 2.00A {Escherichia coli} SCOP: c.34.1.1
Probab=75.82 E-value=2.9 Score=36.10 Aligned_cols=42 Identities=14% Similarity=0.075 Sum_probs=37.7
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhC-CCeEEEEeCCcchhhh
Q 011789 9 PHAIFISYPLQGHVNPSVQLALKLASQ-GFTITFVNTHFIHQQM 51 (477)
Q Consensus 9 ~~il~~~~~~~GH~~p~l~La~~L~~r-Gh~Vt~~~~~~~~~~~ 51 (477)
|||++--.|+.|-+. ...|.+.|+++ |++|.++.++...+.+
T Consensus 1 ~~IllgvTGsiaa~k-~~~ll~~L~~~~g~~V~vv~T~~A~~fi 43 (197)
T 1sbz_A 1 MKLIVGMTGATGAPL-GVALLQALREMPNVETHLVMSKWAKTTI 43 (197)
T ss_dssp CEEEEEECSSSCHHH-HHHHHHHHHTCTTCEEEEEECHHHHHHH
T ss_pred CEEEEEEeChHHHHH-HHHHHHHHHhccCCEEEEEECchHHHHh
Confidence 689998888887766 99999999999 9999999999988887
No 83
>1kjn_A MTH0777; hypotethical protein, structural genomics, PSI, protein structure initiative; 2.20A {Methanothermobacterthermautotrophicus} SCOP: c.115.1.1
Probab=75.08 E-value=4.3 Score=32.88 Aligned_cols=51 Identities=14% Similarity=0.211 Sum_probs=36.9
Q ss_pred CCCcEEEEEc-CCCc-cCHHHHHHHHHHHHhCCCeEEEEeCCcchhhh-ccCCC
Q 011789 6 TQKPHAIFIS-YPLQ-GHVNPSVQLALKLASQGFTITFVNTHFIHQQM-TKASP 56 (477)
Q Consensus 6 ~~~~~il~~~-~~~~-GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~~-~~g~~ 56 (477)
++.||++++- .|.. -.+--.+-+...|.++||+|++++++.....+ .+.++
T Consensus 4 ~~~m~~LilLGCPE~Pvq~p~~lYl~~~Lk~~G~~v~VA~npAAlkLlevaDPe 57 (157)
T 1kjn_A 4 ESTGKALMVLGCPESPVQIPLAIYTSHKLKKKGFRVTVTANPAALRLVQVADPE 57 (157)
T ss_dssp --CCEEEEECCCSCSTTHHHHHHHHHHHHHHTTCEEEEEECHHHHHHHHHHSTT
T ss_pred ccceeeeEEecCCCCcchhhHHHHHHHHHHhcCCeeEEecCHHHHhheeccCCC
Confidence 4456665544 4544 44555788999999999999999999999998 55443
No 84
>3fgn_A Dethiobiotin synthetase; biotin biosynthesis, BIOD, ATP-BIND ligase, magnesium, nucleotide-binding; 1.85A {Mycobacterium tuberculosis} PDB: 3fmf_A* 3fmi_A* 3fpa_A*
Probab=74.85 E-value=6.8 Score=35.24 Aligned_cols=37 Identities=11% Similarity=0.107 Sum_probs=29.5
Q ss_pred CCCcEEEEEcCC--CccCHHHHHHHHHHHHhCCCeEEEE
Q 011789 6 TQKPHAIFISYP--LQGHVNPSVQLALKLASQGFTITFV 42 (477)
Q Consensus 6 ~~~~~il~~~~~--~~GH~~p~l~La~~L~~rGh~Vt~~ 42 (477)
.++|+.+|++.. .-|=..-.+.|++.|+++|++|.++
T Consensus 23 ~~~m~~i~Itgt~t~vGKT~vt~gL~~~l~~~G~~V~~f 61 (251)
T 3fgn_A 23 QSHMTILVVTGTGTGVGKTVVCAALASAARQAGIDVAVC 61 (251)
T ss_dssp CSSCEEEEEEESSTTSCHHHHHHHHHHHHHHTTCCEEEE
T ss_pred ccCCCEEEEEeCCCCCcHHHHHHHHHHHHHHCCCeEEEE
Confidence 355666666654 5578888999999999999999997
No 85
>3ug7_A Arsenical pump-driving ATPase; tail-anchored, membrane protein, targeting factor, ATP-bindi TRC40, ARSA, nucleotide-binding; HET: ADP; 2.90A {Methanocaldococcus jannaschii} PDB: 3ug6_A*
Probab=73.55 E-value=22 Score=33.49 Aligned_cols=43 Identities=21% Similarity=0.232 Sum_probs=36.1
Q ss_pred CCCcEEEEEcC-CCccCHHHHHHHHHHHHhCCCeEEEEeCCcch
Q 011789 6 TQKPHAIFISY-PLQGHVNPSVQLALKLASQGFTITFVNTHFIH 48 (477)
Q Consensus 6 ~~~~~il~~~~-~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~ 48 (477)
..|++|+|++. |+.|=..-...||..|+++|++|.++..+...
T Consensus 23 ~~~~~i~v~sgKGGvGKTTvA~~LA~~lA~~G~rVLlvD~D~~~ 66 (349)
T 3ug7_A 23 KDGTKYIMFGGKGGVGKTTMSAATGVYLAEKGLKVVIVSTDPAH 66 (349)
T ss_dssp SCSCEEEEEECSSSTTHHHHHHHHHHHHHHSSCCEEEEECCTTC
T ss_pred cCCCEEEEEeCCCCccHHHHHHHHHHHHHHCCCeEEEEeCCCCC
Confidence 35667766655 78899999999999999999999999988743
No 86
>3ea0_A ATPase, para family; alpha-beta-alpha sandwich, structural genomics, PSI-2, prote structure initiative; HET: ATP; 2.20A {Chlorobium tepidum}
Probab=71.51 E-value=15 Score=32.27 Aligned_cols=41 Identities=10% Similarity=0.069 Sum_probs=31.5
Q ss_pred CCcEEEEEc--CCCccCHHHHHHHHHHHHhC-CCeEEEEeCCcc
Q 011789 7 QKPHAIFIS--YPLQGHVNPSVQLALKLASQ-GFTITFVNTHFI 47 (477)
Q Consensus 7 ~~~~il~~~--~~~~GH~~p~l~La~~L~~r-Gh~Vt~~~~~~~ 47 (477)
.+||++.+. -|+.|=.--.+.||..|+++ |++|.++-....
T Consensus 2 ~~~~vI~v~s~kGGvGKTt~a~~LA~~la~~~g~~VlliD~D~~ 45 (245)
T 3ea0_A 2 NAKRVFGFVSAKGGDGGSCIAANFAFALSQEPDIHVLAVDISLP 45 (245)
T ss_dssp -CCEEEEEEESSTTSSHHHHHHHHHHHHTTSTTCCEEEEECCTT
T ss_pred CCCeEEEEECCCCCcchHHHHHHHHHHHHhCcCCCEEEEECCCC
Confidence 345554443 36889899999999999999 999999876544
No 87
>1mvl_A PPC decarboxylase athal3A; flavoprotein, active site mutant C175S; HET: FMN; 2.00A {Arabidopsis thaliana} SCOP: c.34.1.1 PDB: 1mvn_A* 1e20_A*
Probab=70.70 E-value=6.1 Score=34.44 Aligned_cols=43 Identities=12% Similarity=0.074 Sum_probs=37.9
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCcchhhh
Q 011789 7 QKPHAIFISYPLQGHVNPSVQLALKLASQGFTITFVNTHFIHQQM 51 (477)
Q Consensus 7 ~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~~ 51 (477)
.++||++...|+.+-+. ...|.+.|.++| +|.++.++.....+
T Consensus 18 ~~k~IllgvTGsiaa~k-~~~ll~~L~~~g-~V~vv~T~~A~~fv 60 (209)
T 1mvl_A 18 RKPRVLLAASGSVAAIK-FGNLCHCFTEWA-EVRAVVTKSSLHFL 60 (209)
T ss_dssp -CCEEEEEECSSGGGGG-HHHHHHHHHTTS-EEEEEECTGGGGTC
T ss_pred CCCEEEEEEeCcHHHHH-HHHHHHHHhcCC-CEEEEEcchHHHhc
Confidence 45799999999998766 899999999999 99999999988777
No 88
>3lyu_A Putative hydrogenase; the C-terminal has AN alpha-beta fold, structural genomics, PSI-2, protein structure initiative; 2.30A {Pyrococcus furiosus}
Probab=70.44 E-value=30 Score=27.67 Aligned_cols=40 Identities=10% Similarity=-0.044 Sum_probs=31.7
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCcchhh
Q 011789 8 KPHAIFISYPLQGHVNPSVQLALKLASQGFTITFVNTHFIHQQ 50 (477)
Q Consensus 8 ~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~ 50 (477)
..+++++..|. =+-|++.+++.|.++|.+|+++ .....+.
T Consensus 18 ~~~~llIaGG~--GiaPl~sm~~~l~~~~~~v~l~-g~R~~~~ 57 (142)
T 3lyu_A 18 FGKILAIGAYT--GIVEVYPIAKAWQEIGNDVTTL-HVTFEPM 57 (142)
T ss_dssp CSEEEEEEETT--HHHHHHHHHHHHHHTTCEEEEE-EEEEGGG
T ss_pred CCeEEEEECcC--cHHHHHHHHHHHHhcCCcEEEE-EeCCHHH
Confidence 46888877665 3899999999999999999999 5554443
No 89
>2v4n_A Multifunctional protein SUR E; hydrolase, surviVal protein, stationary phase, phosph mononucleotidase, divalent metal ION; 1.7A {Salmonella typhimurium} PDB: 2v4o_A
Probab=69.84 E-value=26 Score=31.44 Aligned_cols=41 Identities=12% Similarity=-0.018 Sum_probs=29.7
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCcchhhh
Q 011789 9 PHAIFISYPLQGHVNPSVQLALKLASQGFTITFVNTHFIHQQM 51 (477)
Q Consensus 9 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~~ 51 (477)
||||+.-=-+. |.-=+..|+++|++.| +|+++.+...+.-+
T Consensus 2 M~ILlTNDDGi-~apGi~aL~~~L~~~g-~V~VVAP~~~~Sg~ 42 (254)
T 2v4n_A 2 MRILLSNDDGV-HAPGIQTLAKALREFA-DVQVVAPDRNRSGA 42 (254)
T ss_dssp CEEEEECSSCT-TCHHHHHHHHHHTTTS-EEEEEEESSCCTTC
T ss_pred CeEEEEcCCCC-CCHHHHHHHHHHHhCC-cEEEEeeCCCCcCc
Confidence 57766544443 3334778899998876 99999998887666
No 90
>1g63_A Epidermin modifying enzyme EPID; alpha, beta protein, rossmann like fold, oxidoreductase; HET: FMN; 2.50A {Staphylococcus epidermidis} SCOP: c.34.1.1 PDB: 1g5q_A*
Probab=69.48 E-value=4.8 Score=34.20 Aligned_cols=43 Identities=2% Similarity=-0.079 Sum_probs=36.9
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCcchhhh
Q 011789 8 KPHAIFISYPLQGHVNPSVQLALKLASQGFTITFVNTHFIHQQM 51 (477)
Q Consensus 8 ~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~~ 51 (477)
++||++.-.|+.|=+ -...+.+.|.++|++|.++.++...+.+
T Consensus 2 ~k~IllgvTGs~aa~-k~~~l~~~L~~~g~~V~vv~T~~A~~fi 44 (181)
T 1g63_A 2 YGKLLICATASINVI-NINHYIVELKQHFDEVNILFSPSSKNFI 44 (181)
T ss_dssp CCCEEEEECSCGGGG-GHHHHHHHHTTTSSCEEEEECGGGGGTS
T ss_pred CCEEEEEEECHHHHH-HHHHHHHHHHHCCCEEEEEEchhHHHHH
Confidence 457888888887666 6799999999999999999999988777
No 91
>3av3_A Phosphoribosylglycinamide formyltransferase; structural genomics, riken structural genomics/proteomics in RSGI, rossmann fold; HET: MSE; 1.70A {Geobacillus kaustophilus}
Probab=68.79 E-value=57 Score=28.20 Aligned_cols=102 Identities=4% Similarity=-0.021 Sum_probs=57.4
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhC--CCeEEEEeCCc-chh---hh-ccCCCCCCccccccccCCCCCeEEEecCC
Q 011789 8 KPHAIFISYPLQGHVNPSVQLALKLASQ--GFTITFVNTHF-IHQ---QM-TKASPEMGSDIFAGVRKSGLDIRYMTLSD 80 (477)
Q Consensus 8 ~~~il~~~~~~~GH~~p~l~La~~L~~r--Gh~Vt~~~~~~-~~~---~~-~~g~~~~~~~~~~~~~~~~~~~~~~~l~~ 80 (477)
||||.++-+|+.+ -+.++.++|.+. +|+|..+.+.. ... .. .. ++.+..++.
T Consensus 3 m~ki~vl~sG~g~---~~~~~l~~l~~~~l~~~I~~Vit~~~~~~v~~~A~~~------------------gIp~~~~~~ 61 (212)
T 3av3_A 3 MKRLAVFASGSGT---NFQAIVDAAKRGDLPARVALLVCDRPGAKVIERAARE------------------NVPAFVFSP 61 (212)
T ss_dssp CEEEEEECCSSCH---HHHHHHHHHHTTCCCEEEEEEEESSTTCHHHHHHHHT------------------TCCEEECCG
T ss_pred CcEEEEEEECCcH---HHHHHHHHHHhCCCCCeEEEEEeCCCCcHHHHHHHHc------------------CCCEEEeCc
Confidence 6899888887654 355667788877 78987766542 222 22 23 555554442
Q ss_pred CCCCCCCCCCcHHHHHHHHHHHhHHHHHHHHHHhHhcCCCccEEEecCCCc-chHHHHHHhCCceEEEec
Q 011789 81 GLPLGFDRSLNHEQFMSSLLHVFSAHAEEVIGQIVRSGENVHCLIADTYFV-WPSKLAKKFGLYYISFWT 149 (477)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~pD~iI~D~~~~-~~~~~A~~~gIP~v~~~~ 149 (477)
. ...+. ....+.+.+.++.+ +||++|+-.+.. -...+-+.....++=+.+
T Consensus 62 ~------~~~~~--------~~~~~~~~~~l~~~-----~~Dliv~a~y~~il~~~~l~~~~~~~iNiHp 112 (212)
T 3av3_A 62 K------DYPSK--------AAFESEILRELKGR-----QIDWIALAGYMRLIGPTLLSAYEGKIVNIHP 112 (212)
T ss_dssp G------GSSSH--------HHHHHHHHHHHHHT-----TCCEEEESSCCSCCCHHHHHHTTTCEEEEES
T ss_pred c------cccch--------hhhHHHHHHHHHhc-----CCCEEEEchhhhhCCHHHHhhhcCCEEEEec
Confidence 1 00110 11122233444444 999999876644 455566666666666633
No 92
>3la6_A Tyrosine-protein kinase WZC; P-loop protein, nucleotide binding domain, walker A motif, B protein kinase, oligomerization; HET: ADP; 3.20A {Escherichia coli}
Probab=68.58 E-value=9.9 Score=34.87 Aligned_cols=40 Identities=10% Similarity=0.201 Sum_probs=30.8
Q ss_pred CcEEEEEcC--CCccCHHHHHHHHHHHHhCCCeEEEEeCCcc
Q 011789 8 KPHAIFISY--PLQGHVNPSVQLALKLASQGFTITFVNTHFI 47 (477)
Q Consensus 8 ~~~il~~~~--~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~ 47 (477)
+.|++.++. |+.|=..-...||..|++.|++|.++-....
T Consensus 91 ~~kvI~vts~kgG~GKTtva~nLA~~lA~~G~rVLLID~D~~ 132 (286)
T 3la6_A 91 QNNVLMMTGVSPSIGMTFVCANLAAVISQTNKRVLLIDCDMR 132 (286)
T ss_dssp TCCEEEEEESSSSSSHHHHHHHHHHHHHTTTCCEEEEECCTT
T ss_pred CCeEEEEECCCCCCcHHHHHHHHHHHHHhCCCCEEEEeccCC
Confidence 345554444 5778888899999999999999999966543
No 93
>3bfv_A CAPA1, CAPB2, membrane protein CAPA1, protein tyrosine kinase; chimerical protein, P-loop protein, capsule biogenesis/degradation; HET: ADP; 1.80A {Staphylococcus aureus} PDB: 2ved_A*
Probab=68.49 E-value=30 Score=31.26 Aligned_cols=41 Identities=22% Similarity=0.344 Sum_probs=31.7
Q ss_pred CCcEEEEEcC--CCccCHHHHHHHHHHHHhCCCeEEEEeCCcc
Q 011789 7 QKPHAIFISY--PLQGHVNPSVQLALKLASQGFTITFVNTHFI 47 (477)
Q Consensus 7 ~~~~il~~~~--~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~ 47 (477)
.++++++++. |+.|=.--...||..|+++|++|.++-....
T Consensus 80 ~~~kvI~vts~kgG~GKTt~a~nLA~~lA~~G~rVLLID~D~~ 122 (271)
T 3bfv_A 80 SAVQSIVITSEAPGAGKSTIAANLAVAYAQAGYKTLIVDGDMR 122 (271)
T ss_dssp CCCCEEEEECSSTTSSHHHHHHHHHHHHHHTTCCEEEEECCSS
T ss_pred CCCeEEEEECCCCCCcHHHHHHHHHHHHHhCCCeEEEEeCCCC
Confidence 3455555554 6788888899999999999999999866543
No 94
>3mcu_A Dipicolinate synthase, B chain; NESG, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.30A {Bacillus cereus}
Probab=67.82 E-value=5.6 Score=34.62 Aligned_cols=44 Identities=11% Similarity=-0.056 Sum_probs=32.7
Q ss_pred CCcEEEEEcCCCccCHHH-HHHHHHHHHhCCCeEEEEeCCcchhhh
Q 011789 7 QKPHAIFISYPLQGHVNP-SVQLALKLASQGFTITFVNTHFIHQQM 51 (477)
Q Consensus 7 ~~~~il~~~~~~~GH~~p-~l~La~~L~~rGh~Vt~~~~~~~~~~~ 51 (477)
+++||++.-.|+ +..+- .+.|.+.|+++|++|.++.++.....+
T Consensus 4 ~~k~IllgiTGs-iaayk~~~~ll~~L~~~g~eV~vv~T~~A~~vl 48 (207)
T 3mcu_A 4 KGKRIGFGFTGS-HCTYEEVMPHLEKLIAEGAEVRPVVSYTVQSTN 48 (207)
T ss_dssp TTCEEEEEECSC-GGGGTTSHHHHHHHHHTTCEEEEEECC------
T ss_pred CCCEEEEEEECh-HHHHHHHHHHHHHHHhCCCEEEEEEehHHHHHH
Confidence 457898888887 45665 899999999999999999998877544
No 95
>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}
Probab=67.30 E-value=5.2 Score=36.68 Aligned_cols=34 Identities=18% Similarity=0.224 Sum_probs=25.6
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCc
Q 011789 9 PHAIFISYPLQGHVNPSVQLALKLASQGFTITFVNTHF 46 (477)
Q Consensus 9 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~ 46 (477)
|||++. |+.|.+-. .|++.|.++||+|+.++-..
T Consensus 1 MkILVT--GatGfIG~--~L~~~L~~~G~~V~~l~R~~ 34 (298)
T 4b4o_A 1 MRVLVG--GGTGFIGT--ALTQLLNARGHEVTLVSRKP 34 (298)
T ss_dssp CEEEEE--TTTSHHHH--HHHHHHHHTTCEEEEEESSC
T ss_pred CEEEEE--CCCCHHHH--HHHHHHHHCCCEEEEEECCC
Confidence 787655 55566654 57899999999999997543
No 96
>1fmt_A Methionyl-tRNA FMet formyltransferase; initiator tRNA, translation initiation; 2.00A {Escherichia coli} SCOP: b.46.1.1 c.65.1.1 PDB: 2fmt_A* 3r8x_A
Probab=66.76 E-value=32 Score=31.96 Aligned_cols=34 Identities=24% Similarity=0.175 Sum_probs=25.1
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 011789 7 QKPHAIFISYPLQGHVNPSVQLALKLASQGFTITFVNTH 45 (477)
Q Consensus 7 ~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 45 (477)
.+|||+|+..+..+ ....++|.++||+|..+.+.
T Consensus 2 ~~mrIvf~Gt~~fa-----~~~L~~L~~~~~~i~~Vvt~ 35 (314)
T 1fmt_A 2 ESLRIIFAGTPDFA-----ARHLDALLSSGHNVVGVFTQ 35 (314)
T ss_dssp CCCEEEEEECSHHH-----HHHHHHHHHTTCEEEEEECC
T ss_pred CCCEEEEEecCHHH-----HHHHHHHHHCCCcEEEEEeC
Confidence 46999999886543 45557777889999876654
No 97
>1p3y_1 MRSD protein; flavoprotein, FMN, rossmann fold, HFCD family, oxdidative decarboxylation, cystein, lantibiotics, mersacidin, oxidore; HET: FAD; 2.54A {Bacillus SP} SCOP: c.34.1.1
Probab=66.23 E-value=4.2 Score=35.00 Aligned_cols=44 Identities=14% Similarity=-0.041 Sum_probs=38.1
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCcchhhh
Q 011789 7 QKPHAIFISYPLQGHVNPSVQLALKLASQGFTITFVNTHFIHQQM 51 (477)
Q Consensus 7 ~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~~ 51 (477)
+++||++.-.|+.|=+. ...|.+.|.++|++|.++.++...+.+
T Consensus 7 ~~k~IllgvTGs~aa~k-~~~l~~~L~~~g~~V~vv~T~~A~~fi 50 (194)
T 1p3y_1 7 KDKKLLIGICGSISSVG-ISSYLLYFKSFFKEIRVVMTKTAEDLI 50 (194)
T ss_dssp GGCEEEEEECSCGGGGG-THHHHHHHTTTSSEEEEEECHHHHHHS
T ss_pred CCCEEEEEEECHHHHHH-HHHHHHHHHHCCCEEEEEEchhHHHHH
Confidence 34689998888887775 789999999999999999999888776
No 98
>1ccw_A Protein (glutamate mutase); coenzyme B12, radical reaction, TIM-barrel rossman-fold, isomerase; HET: CNC TAR; 1.60A {Clostridium cochlearium} SCOP: c.23.6.1 PDB: 1cb7_A* 1b1a_A 1i9c_A* 1be1_A 1fmf_A 1id8_A*
Probab=65.53 E-value=8.5 Score=30.92 Aligned_cols=44 Identities=11% Similarity=0.101 Sum_probs=37.2
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCcchhhh
Q 011789 8 KPHAIFISYPLQGHVNPSVQLALKLASQGFTITFVNTHFIHQQM 51 (477)
Q Consensus 8 ~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~~ 51 (477)
+.||++.+.++.+|-....-++..|..+|++|.++....-.+.+
T Consensus 3 ~~~vvla~~~~d~HdiG~~~v~~~l~~~G~~Vi~lG~~~p~e~~ 46 (137)
T 1ccw_A 3 KKTIVLGVIGSDCHAVGNKILDHAFTNAGFNVVNIGVLSPQELF 46 (137)
T ss_dssp CCEEEEEEETTCCCCHHHHHHHHHHHHTTCEEEEEEEEECHHHH
T ss_pred CCEEEEEeCCCchhHHHHHHHHHHHHHCCCEEEECCCCCCHHHH
Confidence 35899999999999999999999999999999988765444443
No 99
>3ih5_A Electron transfer flavoprotein alpha-subunit; alpha-beta-alpha sandwich, structural genomics, PSI-2, protein structure initiative; 2.60A {Bacteroides thetaiotaomicron}
Probab=65.25 E-value=18 Score=31.63 Aligned_cols=107 Identities=7% Similarity=0.021 Sum_probs=61.5
Q ss_pred CCcEEEEEcCCCccCHHH----HHHHHHHHHhC-CCeEEEEeCCcc-h---hhh-ccCCCCCCccccccccCCCCCeEEE
Q 011789 7 QKPHAIFISYPLQGHVNP----SVQLALKLASQ-GFTITFVNTHFI-H---QQM-TKASPEMGSDIFAGVRKSGLDIRYM 76 (477)
Q Consensus 7 ~~~~il~~~~~~~GH~~p----~l~La~~L~~r-Gh~Vt~~~~~~~-~---~~~-~~g~~~~~~~~~~~~~~~~~~~~~~ 76 (477)
.|..|+++.--..|.++| ++.-|++|++. |-+|+.++.... . +.+ ..|.+ .+-..
T Consensus 2 ~m~~ilV~~E~~~g~l~~~s~ell~~A~~La~~~g~~v~av~~G~~~~~~~~~~~~~Gad---------------~v~~v 66 (217)
T 3ih5_A 2 NANNLFVYCEIEEGIVADVSLELLTKGRSLANELNCQLEAVVAGTGLKEIEKQILPYGVD---------------KLHVF 66 (217)
T ss_dssp -CCCEEEECCEETTEECHHHHHHHHHHHHHHHHHTCCEEEEEEESCCTTTHHHHGGGTCS---------------EEEEE
T ss_pred CcccEEEEEECcCCEECHHHHHHHHHHHHHHHhcCCeEEEEEECCCHHHHHHHHHhcCCC---------------EEEEe
Confidence 467788888766677666 57778888874 777776654332 1 222 44544 22222
Q ss_pred ecCCCCCCCCCCCCcHHHHHHHHHHHhHHHHHHHHHHhHhcCCCccEEEecCCCc---chHHHHHHhCCceEEE
Q 011789 77 TLSDGLPLGFDRSLNHEQFMSSLLHVFSAHAEEVIGQIVRSGENVHCLIADTYFV---WPSKLAKKFGLYYISF 147 (477)
Q Consensus 77 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~pD~iI~D~~~~---~~~~~A~~~gIP~v~~ 147 (477)
.-+ .+. ... . ......+.+++++. +||+|++..-.. .+..+|.++|+|.+.-
T Consensus 67 ~~~-~~~-----~~~-~-------~~~a~~l~~~i~~~-----~p~~Vl~g~t~~G~~laprlAa~L~~~~~sd 121 (217)
T 3ih5_A 67 DAE-GLY-----PYT-S-------LPHTSILVNLFKEE-----QPQICLMGATVIGRDLGPRVSSALTSGLTAD 121 (217)
T ss_dssp ECG-GGS-----SCC-H-------HHHHHHHHHHHHHH-----CCSEEEEECSHHHHHHHHHHHHHTTCCCBCS
T ss_pred cCc-ccc-----cCC-H-------HHHHHHHHHHHHhc-----CCCEEEEeCCcchhhHHHHHHHHhCCCccce
Confidence 111 000 000 0 11222344555655 899999886444 3567899999998774
No 100
>4dim_A Phosphoribosylglycinamide synthetase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, ligase; 2.61A {Anaerococcus prevotii}
Probab=64.43 E-value=21 Score=34.30 Aligned_cols=36 Identities=6% Similarity=-0.081 Sum_probs=28.3
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCc
Q 011789 6 TQKPHAIFISYPLQGHVNPSVQLALKLASQGFTITFVNTHF 46 (477)
Q Consensus 6 ~~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~ 46 (477)
..++||+++..+..+ +.+++++.+.|++|.++..+.
T Consensus 5 ~~~~~ilI~g~g~~~-----~~~~~a~~~~G~~~v~v~~~~ 40 (403)
T 4dim_A 5 YDNKRLLILGAGRGQ-----LGLYKAAKELGIHTIAGTMPN 40 (403)
T ss_dssp -CCCEEEEECCCGGG-----HHHHHHHHHHTCEEEEEECSS
T ss_pred cCCCEEEEECCcHhH-----HHHHHHHHHCCCEEEEEcCCC
Confidence 456899999887643 668999999999999997643
No 101
>2yxb_A Coenzyme B12-dependent mutase; alpha/beta, structural genomics, NPPSFA, national project on structural and functional analyses; 1.80A {Aeropyrum pernix}
Probab=64.32 E-value=6.5 Score=32.63 Aligned_cols=44 Identities=18% Similarity=0.306 Sum_probs=37.8
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCcchhh
Q 011789 7 QKPHAIFISYPLQGHVNPSVQLALKLASQGFTITFVNTHFIHQQ 50 (477)
Q Consensus 7 ~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~ 50 (477)
...||++.+.++.+|-....-++..|..+|++|.++....-.+.
T Consensus 17 ~~~~vlla~~~gd~HdiG~~~va~~l~~~G~eVi~lG~~~p~e~ 60 (161)
T 2yxb_A 17 RRYKVLVAKMGLDGHDRGAKVVARALRDAGFEVVYTGLRQTPEQ 60 (161)
T ss_dssp CSCEEEEEEESSSSCCHHHHHHHHHHHHTTCEEECCCSBCCHHH
T ss_pred CCCEEEEEeCCCCccHHHHHHHHHHHHHCCCEEEECCCCCCHHH
Confidence 56799999999999999999999999999999999876544333
No 102
>1jx7_A Hypothetical protein YCHN; NEW fold, hexamer, structural genomics, BSGC structure funded by NIH, protein structure initiative, PSI; 2.80A {Escherichia coli} SCOP: c.114.1.1
Probab=63.35 E-value=12 Score=28.67 Aligned_cols=44 Identities=11% Similarity=0.032 Sum_probs=33.2
Q ss_pred CcEEEEEcCC---CccCHHHHHHHHHHHHhC-CC-eEEEEeCCcchhhh
Q 011789 8 KPHAIFISYP---LQGHVNPSVQLALKLASQ-GF-TITFVNTHFIHQQM 51 (477)
Q Consensus 8 ~~~il~~~~~---~~GH~~p~l~La~~L~~r-Gh-~Vt~~~~~~~~~~~ 51 (477)
|||++|+-.. +.......+.+|..+.+. || +|+++.........
T Consensus 1 M~k~~ii~~~~p~~~~~~~~al~~a~~~~~~~g~~~v~vff~~dgV~~~ 49 (117)
T 1jx7_A 1 MQKIVIVANGAPYGSESLFNSLRLAIALREQESNLDLRLFLMSDAVTAG 49 (117)
T ss_dssp CCEEEEEECCCTTTCSHHHHHHHHHHHHHHHCTTCEEEEEECGGGGGGG
T ss_pred CcEEEEEEcCCCCCcHHHHHHHHHHHHHHhcCCCccEEEEEEchHHHHH
Confidence 5567655554 345567789999999999 99 99998888777665
No 103
>3bbn_B Ribosomal protein S2; small ribosomal subunit, spinach chloroplast ribosome, ribonucleoprotein particle, macromolecular complex; 9.40A {Spinacea oleracea} SCOP: i.1.1.1
Probab=62.99 E-value=4.3 Score=35.89 Aligned_cols=31 Identities=13% Similarity=0.016 Sum_probs=23.4
Q ss_pred CccEEE-ecCCCc-chHHHHHHhCCceEEEecc
Q 011789 120 NVHCLI-ADTYFV-WPSKLAKKFGLYYISFWTE 150 (477)
Q Consensus 120 ~pD~iI-~D~~~~-~~~~~A~~~gIP~v~~~~~ 150 (477)
.||+|| +|+..- .+..=|.++|||.|.+.-+
T Consensus 157 ~Pdll~v~Dp~~e~~ai~EA~~l~IPvIaivDT 189 (231)
T 3bbn_B 157 LPDIVIIVDQQEEYTALRECITLGIPTICLIDT 189 (231)
T ss_dssp CCSEEEESCTTTTHHHHHHHHTTTCCEEECCCS
T ss_pred CCCEEEEeCCccccHHHHHHHHhCCCEEEEecC
Confidence 699987 555333 6778899999999998543
No 104
>3mc3_A DSRE/DSRF-like family protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MLY MSE; 1.49A {Sulfolobus solfataricus}
Probab=62.71 E-value=16 Score=29.03 Aligned_cols=45 Identities=9% Similarity=-0.032 Sum_probs=34.1
Q ss_pred CCcEEEEEcC-C--CccCHHHHHHHHHHHHhCCCeEEEEeCCcchhhh
Q 011789 7 QKPHAIFISY-P--LQGHVNPSVQLALKLASQGFTITFVNTHFIHQQM 51 (477)
Q Consensus 7 ~~~~il~~~~-~--~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~~ 51 (477)
.++|++|+.. + +.......+.+|...++.||+|+++........+
T Consensus 14 ~~~kl~ii~~sgP~~~~~~~~al~lA~~A~a~g~eV~vFf~~dGV~~l 61 (134)
T 3mc3_A 14 QXXXILIVVTHGPEDLDRTYAPLFMASISASMEYETSVFFMIXGPXLL 61 (134)
T ss_dssp CCCEEEEEECCCGGGTHHHHHHHHHHHHHHHTTCEEEEEECTTGGGGG
T ss_pred ccceEEEEEccCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEeCcHHHH
Confidence 4567765555 4 4567788889999999999999998777666554
No 105
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=62.17 E-value=8.3 Score=36.12 Aligned_cols=35 Identities=17% Similarity=0.062 Sum_probs=29.8
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 011789 6 TQKPHAIFISYPLQGHVNPSVQLALKLASQGFTITFVNT 44 (477)
Q Consensus 6 ~~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 44 (477)
..|+||.|+-.++.| |-.+|+.|.++||+|+..=.
T Consensus 2 ~~~~~i~~iGiGg~G----ms~~A~~L~~~G~~V~~~D~ 36 (326)
T 3eag_A 2 NAMKHIHIIGIGGTF----MGGLAAIAKEAGFEVSGCDA 36 (326)
T ss_dssp -CCCEEEEESCCSHH----HHHHHHHHHHTTCEEEEEES
T ss_pred CCCcEEEEEEECHHH----HHHHHHHHHhCCCEEEEEcC
Confidence 357899999999998 55799999999999998744
No 106
>1xmp_A PURE, phosphoribosylaminoimidazole carboxylase; purine biosynthesis, spine, lyase; 1.80A {Bacillus anthracis} SCOP: c.23.8.1
Probab=61.83 E-value=68 Score=26.58 Aligned_cols=142 Identities=11% Similarity=0.094 Sum_probs=79.1
Q ss_pred CcEEEEEecccccCCHHHHHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCchhHHHhcCCCeEEEeeccHHHhhccCCCC
Q 011789 282 GSVLYVSFGSYAHVSKRDLIEIANGIAKSKVTFIWILRPDIVSSDDPNPLPEDFKKEVADRSMIITWCCQTSVLAHPAIG 361 (477)
Q Consensus 282 ~~~I~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~lp~~~~~~~~~nv~v~~~~p~~~lL~~~~~~ 361 (477)
+|.|-|-+||.. +....++....++..|..+-+.+-+. ...|+...+-. .+ .....++
T Consensus 11 ~~~V~IimGS~S--D~~v~~~a~~~L~~~Gi~~dv~V~Sa-------HR~p~~l~~~~----------~~---a~~~g~~ 68 (170)
T 1xmp_A 11 KSLVGVIMGSTS--DWETMKYACDILDELNIPYEKKVVSA-------HRTPDYMFEYA----------ET---ARERGLK 68 (170)
T ss_dssp CCSEEEEESSGG--GHHHHHHHHHHHHHTTCCEEEEECCT-------TTSHHHHHHHH----------HH---TTTTTCC
T ss_pred CCcEEEEECcHH--HHHHHHHHHHHHHHcCCCEEEEEEec-------cCCHHHHHHHH----------HH---HHhCCCc
Confidence 456777778775 56677888888899998876666544 34555332110 00 0011123
Q ss_pred ccccccCCchhhHHHhc---Ccceeccccccc--hhhH-HHHHHh--hhcceeeec-CCC--CcCHHHHHHHHHHHhcCC
Q 011789 362 GFLTHCGWNSVLEGLWC---GVPLLCFPLYTD--QFTN-RKLAVD--DWNVGLNLS-NEK--VITKEEVSKNVHLLMGEK 430 (477)
Q Consensus 362 ~~ItHgG~gs~~eal~~---GvP~v~~P~~~D--Q~~n-a~~v~~--~~G~G~~~~-~~~--~~~~~~l~~~i~~~l~~~ 430 (477)
++|.=.|+-.-+-.+.+ -+|+|.+|.... +... -.-+.+ . |+.+..- .++ -.++.-+...|. -+.|+
T Consensus 69 ViIa~AG~aa~LpgvvA~~t~~PVIgVP~~~~~l~G~daLlSivqmP~-GvpVatV~I~~a~~~nAallAaqIl-a~~d~ 146 (170)
T 1xmp_A 69 VIIAGAGGAAHLPGMVAAKTNLPVIGVPVQSKALNGLDSLLSIVQMPG-GVPVATVAIGKAGSTNAGLLAAQIL-GSFHD 146 (170)
T ss_dssp EEEEEEESSCCHHHHHHTTCCSCEEEEEECCTTTTTHHHHHHHHCCCT-TCCCEECCSSHHHHHHHHHHHHHHH-HTTCH
T ss_pred EEEEECCchhhhHHHHHhccCCCEEEeeCCCCCCCcHHHHHHHhcCCC-CCeeEEEecCCcchHHHHHHHHHHH-ccCCH
Confidence 47777666444433333 469999997432 2222 223445 4 5543210 000 134444544443 35788
Q ss_pred chHHHHHHHHHHHHHHHHHh
Q 011789 431 SGAKYRNAAKQVKKAMEYAL 450 (477)
Q Consensus 431 ~~~~~~~~a~~l~~~~~~~~ 450 (477)
+++++.+..++++++..
T Consensus 147 ---~l~~kl~~~r~~~~~~v 163 (170)
T 1xmp_A 147 ---DIHDALELRREAIEKDV 163 (170)
T ss_dssp ---HHHHHHHHHHHHHHHHH
T ss_pred ---HHHHHHHHHHHHHHHHH
Confidence 89999999998888643
No 107
>3vot_A L-amino acid ligase, BL00235; ATP-grAsp motif, ATP-binding; HET: ADP PG4; 1.80A {Bacillus licheniformis}
Probab=59.85 E-value=51 Score=31.78 Aligned_cols=38 Identities=11% Similarity=0.058 Sum_probs=26.3
Q ss_pred CCCCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCc
Q 011789 4 NKTQKPHAIFISYPLQGHVNPSVQLALKLASQGFTITFVNTHF 46 (477)
Q Consensus 4 ~~~~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~ 46 (477)
|+...+||++++.+.... .+.++.++.|++|+++.+..
T Consensus 1 M~~~~k~l~Il~~~~~~~-----~i~~aa~~lG~~vv~v~~~~ 38 (425)
T 3vot_A 1 MTKRNKNLAIICQNKHLP-----FIFEEAERLGLKVTFFYNSA 38 (425)
T ss_dssp -CCCCCEEEEECCCTTCC-----HHHHHHHHTTCEEEEEEETT
T ss_pred CCCCCcEEEEECCChhHH-----HHHHHHHHCCCEEEEEECCC
Confidence 456667888887654322 35678888899999886544
No 108
>1psw_A ADP-heptose LPS heptosyltransferase II; structural genomics, NYSGXRC, LPS biosynthetic pathway, PSI, protein structure initiative; 2.00A {Escherichia coli} SCOP: c.87.1.7
Probab=59.78 E-value=57 Score=30.19 Aligned_cols=42 Identities=19% Similarity=0.230 Sum_probs=28.7
Q ss_pred cEEEEEcCCCccC-----HHHHHHHHHHHHhCCCeEEEEeCCcchhh
Q 011789 9 PHAIFISYPLQGH-----VNPSVQLALKLASQGFTITFVNTHFIHQQ 50 (477)
Q Consensus 9 ~~il~~~~~~~GH-----~~p~l~La~~L~~rGh~Vt~~~~~~~~~~ 50 (477)
..|++.|....+. ..-+.++++.|.++|++|.+...+...+.
T Consensus 181 ~~i~l~pga~~~~~k~wp~~~~~~l~~~L~~~~~~vvl~g~~~e~~~ 227 (348)
T 1psw_A 181 PMIGFCPGAEFGPAKRWPHYHYAELAKQLIDEGYQVVLFGSAKDHEA 227 (348)
T ss_dssp CEEEEECCCTTCGGGSCCHHHHHHHHHHHHHTTCEEEECCCGGGHHH
T ss_pred cEEEEECCCCccccCCCCHHHHHHHHHHHHHCCCeEEEEeChhhHHH
Confidence 3566666542222 33689999999999999998877665443
No 109
>2r8r_A Sensor protein; KDPD, PFAM02702, MCSG, structural genomics, protein structure initiative, midwest center for structural genomics, kinase; 2.30A {Pseudomonas syringae PV}
Probab=59.20 E-value=14 Score=32.55 Aligned_cols=41 Identities=15% Similarity=0.053 Sum_probs=37.0
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCc
Q 011789 6 TQKPHAIFISYPLQGHVNPSVQLALKLASQGFTITFVNTHF 46 (477)
Q Consensus 6 ~~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~ 46 (477)
.++++|++..-|+.|=..-++.+|.+|+++|++|.++....
T Consensus 4 ~g~l~I~~~~kgGvGKTt~a~~la~~l~~~G~~V~v~d~D~ 44 (228)
T 2r8r_A 4 RGRLKVFLGAAPGVGKTYAMLQAAHAQLRQGVRVMAGVVET 44 (228)
T ss_dssp CCCEEEEEESSTTSSHHHHHHHHHHHHHHTTCCEEEEECCC
T ss_pred CceEEEEEECCCCCcHHHHHHHHHHHHHHCCCCEEEEEeCC
Confidence 46789999999999999999999999999999998887654
No 110
>3n7t_A Macrophage binding protein; seattle structural genomics center for infectious disease, S macrophage, pathogenic fungus, coccidioidomycosis; 2.10A {Coccidioides immitis} SCOP: c.23.16.0
Probab=58.41 E-value=20 Score=32.03 Aligned_cols=40 Identities=10% Similarity=0.125 Sum_probs=30.5
Q ss_pred CCcEEEEEcCCCcc-----------CHHHHHHHHHHHHhCCCeEEEEeCCc
Q 011789 7 QKPHAIFISYPLQG-----------HVNPSVQLALKLASQGFTITFVNTHF 46 (477)
Q Consensus 7 ~~~~il~~~~~~~G-----------H~~p~l~La~~L~~rGh~Vt~~~~~~ 46 (477)
.|+||+++.....+ ...=++.-...|.+.|++|+++++..
T Consensus 8 ~mkkvlvvlt~~~~~~~~~g~~tG~~~~E~~~p~~~l~~aG~~V~~aSp~g 58 (247)
T 3n7t_A 8 LPRKALLAITSAHPPFWPDGKRTGLFFSEALHPFNELTAAGFEVDVASETG 58 (247)
T ss_dssp CCSEEEEECCCCCCBCSTTSCBCCBCHHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred cCCeEEEEECCCCcccCCCCCCCcccHHHHHHHHHHHHHCCCEEEEEeCCC
Confidence 47899998877422 24457777889999999999999754
No 111
>1qzu_A Hypothetical protein MDS018; alpha-beta sandwich, lyase; HET: FMN; 2.91A {Homo sapiens} SCOP: c.34.1.1
Probab=57.83 E-value=10 Score=32.92 Aligned_cols=45 Identities=18% Similarity=0.113 Sum_probs=36.5
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHh-CCCeEEEEeCCcchhhh
Q 011789 6 TQKPHAIFISYPLQGHVNPSVQLALKLAS-QGFTITFVNTHFIHQQM 51 (477)
Q Consensus 6 ~~~~~il~~~~~~~GH~~p~l~La~~L~~-rGh~Vt~~~~~~~~~~~ 51 (477)
..++||++...|+.+=+ -...|.+.|.+ +|++|.++.++...+.+
T Consensus 17 l~~k~IllgvTGsiaa~-k~~~lv~~L~~~~g~~V~vv~T~~A~~fi 62 (206)
T 1qzu_A 17 ERKFHVLVGVTGSVAAL-KLPLLVSKLLDIPGLEVAVVTTERAKHFY 62 (206)
T ss_dssp CSSEEEEEEECSSGGGG-THHHHHHHHC---CEEEEEEECTGGGGSS
T ss_pred cCCCEEEEEEeChHHHH-HHHHHHHHHhcccCCEEEEEECHhHHHHh
Confidence 34578999988888855 46999999999 89999999999988777
No 112
>3qvl_A Putative hydantoin racemase; isomerase; HET: 5HY; 1.82A {Klebsiella pneumoniae subsp} PDB: 3qvk_A* 3qvj_A
Probab=57.72 E-value=60 Score=28.78 Aligned_cols=37 Identities=16% Similarity=-0.008 Sum_probs=25.3
Q ss_pred cEEEEEcCCCccCH-HHHHHHHHHHHhCCCeEEEEeCC
Q 011789 9 PHAIFISYPLQGHV-NPSVQLALKLASQGFTITFVNTH 45 (477)
Q Consensus 9 ~~il~~~~~~~GH~-~p~l~La~~L~~rGh~Vt~~~~~ 45 (477)
|||+++-.-+.-++ ..+...++.++.-|-+|.+++.+
T Consensus 2 mrilvINPnts~~~T~~i~~~~~~~~~p~~~i~~~t~~ 39 (245)
T 3qvl_A 2 VRIQVINPNTSLAMTETIGAAARAVAAPGTEILAVCPR 39 (245)
T ss_dssp EEEEEECSSCCHHHHHHHHHHHHHHCCTTEEEEEECCS
T ss_pred CEEEEEeCCCCHHHHHHHHHHHHHhcCCCCEEEEEeCC
Confidence 67777666555555 56667777777667788777754
No 113
>3mjf_A Phosphoribosylamine--glycine ligase; structural genomics, CEN structural genomics of infectious diseases, csgid; HET: MSE PGE; 1.47A {Yersinia pestis} PDB: 1gso_A
Probab=57.62 E-value=14 Score=36.19 Aligned_cols=37 Identities=14% Similarity=0.002 Sum_probs=24.7
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCcch
Q 011789 7 QKPHAIFISYPLQGHVNPSVQLALKLASQGFTITFVNTHFIH 48 (477)
Q Consensus 7 ~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~ 48 (477)
.||||+++-.+++-| +||+.|.+.++--.+++.+.+.
T Consensus 2 ~~mkvlviG~ggre~-----ala~~l~~s~~v~~v~~~pgn~ 38 (431)
T 3mjf_A 2 NAMNILIIGNGGREH-----ALGWKAAQSPLADKIYVAPGNA 38 (431)
T ss_dssp -CEEEEEEECSHHHH-----HHHHHHTTCTTEEEEEEEECCH
T ss_pred CCcEEEEECCCHHHH-----HHHHHHHhCCCCCEEEEECCCH
Confidence 589999998886554 6899999887532333334443
No 114
>2vo1_A CTP synthase 1; pyrimidine biosynthesis, glutamine amidotransferase, phosphorylation, amidotransferase, cytidine 5-prime triphos synthetase, UTP; 2.8A {Homo sapiens} SCOP: c.37.1.10 PDB: 3ihl_A*
Probab=57.57 E-value=11 Score=34.04 Aligned_cols=44 Identities=16% Similarity=0.042 Sum_probs=35.9
Q ss_pred CCCcEEEEEcCC---CccCHHHHHHHHHHHHhCCCeEEEEeCCcchh
Q 011789 6 TQKPHAIFISYP---LQGHVNPSVQLALKLASQGFTITFVNTHFIHQ 49 (477)
Q Consensus 6 ~~~~~il~~~~~---~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~ 49 (477)
...||.+|++.| +.|-=.-...|+..|++||++||..=..++-.
T Consensus 20 ~~~~KyIfVTGGVvS~lGKGi~aaSlg~lLk~~G~~Vt~~K~DPYlN 66 (295)
T 2vo1_A 20 FQSMKYILVTGGVISGIGKGIIASSVGTILKSCGLHVTSIKIDPYIN 66 (295)
T ss_dssp -CCCEEEEEEECSSSSSSHHHHHHHHHHHHHHTTCCEEEEEEECSSC
T ss_pred cccceEEEEcCCcccccccHHHHHHHHHHHHHCCCcceeeeccccee
Confidence 456899999987 56777889999999999999999986665543
No 115
>1y80_A Predicted cobalamin binding protein; corrinoid, factor IIIM, methyl transferase, structural genomics, PSI, protein structure initiative; HET: B1M; 1.70A {Moorella thermoacetica}
Probab=57.29 E-value=14 Score=32.01 Aligned_cols=45 Identities=16% Similarity=0.084 Sum_probs=39.0
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCcchhhh
Q 011789 7 QKPHAIFISYPLQGHVNPSVQLALKLASQGFTITFVNTHFIHQQM 51 (477)
Q Consensus 7 ~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~~ 51 (477)
...+|++.+.++..|-....-++..|..+|++|.++....-.+.+
T Consensus 87 ~~~~vll~~~~gd~H~iG~~~va~~l~~~G~~v~~LG~~vp~~~l 131 (210)
T 1y80_A 87 SVGKIVLGTVKGDLHDIGKNLVAMMLESGGFTVYNLGVDIEPGKF 131 (210)
T ss_dssp CCCEEEEEEBTTCCCCHHHHHHHHHHHHTTCEEEECCSSBCHHHH
T ss_pred CCCEEEEEeCCCcccHHHHHHHHHHHHHCCCEEEECCCCCCHHHH
Confidence 456999999999999999999999999999999998876554444
No 116
>2qyt_A 2-dehydropantoate 2-reductase; APC81190, porphyromonas gingi W83, structural genomics, PSI-2; HET: MSE; 2.15A {Porphyromonas gingivalis}
Probab=56.35 E-value=4.5 Score=37.54 Aligned_cols=38 Identities=13% Similarity=0.149 Sum_probs=28.2
Q ss_pred CCCCCCcEEEEEcCCCccCHHHHHHHHHHHHhC-----C-CeEEEEeCC
Q 011789 3 GNKTQKPHAIFISYPLQGHVNPSVQLALKLASQ-----G-FTITFVNTH 45 (477)
Q Consensus 3 ~~~~~~~~il~~~~~~~GH~~p~l~La~~L~~r-----G-h~Vt~~~~~ 45 (477)
.|+..||||+|+-.|..|. .+|..|.++ | |+|+++..+
T Consensus 3 ~m~~~~m~I~iiG~G~mG~-----~~a~~L~~~~~~~~g~~~V~~~~r~ 46 (317)
T 2qyt_A 3 AMNQQPIKIAVFGLGGVGG-----YYGAMLALRAAATDGLLEVSWIARG 46 (317)
T ss_dssp ----CCEEEEEECCSHHHH-----HHHHHHHHHHHHTTSSEEEEEECCH
T ss_pred CCCCCCCEEEEECcCHHHH-----HHHHHHHhCccccCCCCCEEEEEcH
Confidence 4666778999998888884 568888888 9 999999763
No 117
>2bw0_A 10-FTHFDH, 10-formyltetrahydrofolate dehydrogenase; nucleotide biosynthesis, oxidoreductase; 1.7A {Homo sapiens} SCOP: b.46.1.1 c.65.1.1 PDB: 2cfi_A* 1s3i_A
Probab=55.64 E-value=21 Score=33.41 Aligned_cols=32 Identities=16% Similarity=0.067 Sum_probs=23.1
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 011789 8 KPHAIFISYPLQGHVNPSVQLALKLASQGFTITFVNT 44 (477)
Q Consensus 8 ~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 44 (477)
+|||+|+. --+-...+.++|.++||+|..+.+
T Consensus 22 ~mrIvf~G-----~~~fa~~~L~~L~~~~~~i~~Vvt 53 (329)
T 2bw0_A 22 SMKIAVIG-----QSLFGQEVYCHLRKEGHEVVGVFT 53 (329)
T ss_dssp CCEEEEEC-----CHHHHHHHHHHHHHTTCEEEEEEE
T ss_pred CCEEEEEc-----CcHHHHHHHHHHHHCCCeEEEEEe
Confidence 48999992 223344577899999999987665
No 118
>3rfo_A Methionyl-tRNA formyltransferase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta structure, cytosol; HET: PGE; 2.40A {Bacillus anthracis}
Probab=55.31 E-value=13 Score=34.62 Aligned_cols=36 Identities=19% Similarity=0.263 Sum_probs=28.3
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCc
Q 011789 6 TQKPHAIFISYPLQGHVNPSVQLALKLASQGFTITFVNTHF 46 (477)
Q Consensus 6 ~~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~ 46 (477)
.+||||+|+-.+..+ +...++|.++||+|..+.+..
T Consensus 2 ~~mmrIvf~Gtp~fa-----~~~L~~L~~~~~~v~~Vvt~p 37 (317)
T 3rfo_A 2 NAMIKVVFMGTPDFS-----VPVLRRLIEDGYDVIGVVTQP 37 (317)
T ss_dssp CTTSEEEEECCSTTH-----HHHHHHHHHTTCEEEEEECCC
T ss_pred CCceEEEEEeCCHHH-----HHHHHHHHHCCCcEEEEEeCC
Confidence 578999999888665 345678888899998877654
No 119
>1uan_A Hypothetical protein TT1542; rossmann-like, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; 2.00A {Thermus thermophilus} SCOP: c.134.1.1
Probab=55.15 E-value=48 Score=29.01 Aligned_cols=35 Identities=9% Similarity=0.096 Sum_probs=19.5
Q ss_pred CcEEE-EEcCCCccCHHHHHHHHHHHHhCCCeEEEEe
Q 011789 8 KPHAI-FISYPLQGHVNPSVQLALKLASQGFTITFVN 43 (477)
Q Consensus 8 ~~~il-~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~ 43 (477)
|++|+ +.++|-.= ..-+-.....|.++|++|++++
T Consensus 1 m~~vL~v~aHPDDe-~l~~ggtia~~~~~G~~v~vv~ 36 (227)
T 1uan_A 1 MLDLLVVAPHPDDG-ELGCGGTLARAKAEGLSTGILD 36 (227)
T ss_dssp CEEEEEEESSTTHH-HHHHHHHHHHHHHTTCCEEEEE
T ss_pred CceEEEEEeCCCcH-HHhHHHHHHHHHhCCCcEEEEE
Confidence 45654 44445322 2233344455668899988764
No 120
>3da8_A Probable 5'-phosphoribosylglycinamide formyltransferase PURN; glycinamide ribonucleotide transformylase, structure; 1.30A {Mycobacterium tuberculosis} PDB: 3dcj_A*
Probab=54.77 E-value=33 Score=29.83 Aligned_cols=40 Identities=3% Similarity=-0.081 Sum_probs=24.6
Q ss_pred CCCCcEEEEEcCCCccCHHHHHHHHHHHHh-CCCeEEEEeCCcc
Q 011789 5 KTQKPHAIFISYPLQGHVNPSVQLALKLAS-QGFTITFVNTHFI 47 (477)
Q Consensus 5 ~~~~~~il~~~~~~~GH~~p~l~La~~L~~-rGh~Vt~~~~~~~ 47 (477)
+..|+||+++.+|..+-+...+ +++.+ .+++|..+.+...
T Consensus 9 ~~~~~ri~vl~SG~gsnl~all---~~~~~~~~~eI~~Vis~~~ 49 (215)
T 3da8_A 9 PSAPARLVVLASGTGSLLRSLL---DAAVGDYPARVVAVGVDRE 49 (215)
T ss_dssp CCSSEEEEEEESSCCHHHHHHH---HHSSTTCSEEEEEEEESSC
T ss_pred CCCCcEEEEEEeCChHHHHHHH---HHHhccCCCeEEEEEeCCc
Confidence 4567899999888755444444 44433 3468877665443
No 121
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=54.57 E-value=9 Score=35.33 Aligned_cols=37 Identities=27% Similarity=0.317 Sum_probs=29.2
Q ss_pred CCCCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 011789 4 NKTQKPHAIFISYPLQGHVNPSVQLALKLASQGFTITFVNTH 45 (477)
Q Consensus 4 ~~~~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 45 (477)
|...|+||.|+-.|..|+ .+|..|+++||+|+++...
T Consensus 11 ~~~~~~~I~VIG~G~mG~-----~iA~~la~~G~~V~~~d~~ 47 (302)
T 1f0y_A 11 KKIIVKHVTVIGGGLMGA-----GIAQVAAATGHTVVLVDQT 47 (302)
T ss_dssp -CCCCCEEEEECCSHHHH-----HHHHHHHHTTCEEEEECSC
T ss_pred ccccCCEEEEECCCHHHH-----HHHHHHHhCCCeEEEEECC
Confidence 334578999998888886 4788899999999987654
No 122
>3obb_A Probable 3-hydroxyisobutyrate dehydrogenase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: EPE; 2.20A {Pseudomonas aeruginosa} PDB: 3q3c_A*
Probab=54.27 E-value=11 Score=34.95 Aligned_cols=33 Identities=18% Similarity=0.340 Sum_probs=28.3
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 011789 7 QKPHAIFISYPLQGHVNPSVQLALKLASQGFTITFVNT 44 (477)
Q Consensus 7 ~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 44 (477)
.|+||.|+-.|..|. ++|+.|.++||+|+++--
T Consensus 2 ~M~kIgfIGlG~MG~-----~mA~~L~~~G~~v~v~dr 34 (300)
T 3obb_A 2 HMKQIAFIGLGHMGA-----PMATNLLKAGYLLNVFDL 34 (300)
T ss_dssp -CCEEEEECCSTTHH-----HHHHHHHHTTCEEEEECS
T ss_pred CcCEEEEeeehHHHH-----HHHHHHHhCCCeEEEEcC
Confidence 478999999999985 689999999999998743
No 123
>3f6r_A Flavodoxin; FMN binding, oxidized, electron transport, flavoprotein, FMN, transport; HET: FMN; 2.00A {Desulfovibrio desulfuricans} SCOP: c.23.5.0 PDB: 3f6s_A* 3f90_A* 3kap_A* 3kaq_A*
Probab=54.09 E-value=13 Score=29.83 Aligned_cols=39 Identities=18% Similarity=0.237 Sum_probs=28.8
Q ss_pred CcEEEEEcCCCccCHHHHHH-HHHHHHhCCCeEEEEeCCc
Q 011789 8 KPHAIFISYPLQGHVNPSVQ-LALKLASQGFTITFVNTHF 46 (477)
Q Consensus 8 ~~~il~~~~~~~GH~~p~l~-La~~L~~rGh~Vt~~~~~~ 46 (477)
||||+++-...+|+..-+.. |++.|.++|++|.++....
T Consensus 1 M~ki~I~y~S~tGnT~~~A~~ia~~l~~~g~~v~~~~~~~ 40 (148)
T 3f6r_A 1 MSKVLIVFGSSTGNTESIAQKLEELIAAGGHEVTLLNAAD 40 (148)
T ss_dssp -CEEEEEEECSSSHHHHHHHHHHHHHHTTTCEEEEEETTT
T ss_pred CCeEEEEEECCCchHHHHHHHHHHHHHhCCCeEEEEehhh
Confidence 67887777777888876554 5777888899999876544
No 124
>3fkq_A NTRC-like two-domain protein; RER070207001320, structural GE joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: ATP 2PE; 2.10A {Eubacterium rectale}
Probab=53.68 E-value=50 Score=31.28 Aligned_cols=39 Identities=23% Similarity=0.279 Sum_probs=31.3
Q ss_pred CCcEE-EEEc-CCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 011789 7 QKPHA-IFIS-YPLQGHVNPSVQLALKLASQGFTITFVNTH 45 (477)
Q Consensus 7 ~~~~i-l~~~-~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 45 (477)
.++|+ +|++ -|+.|=..-.+.||..|+++|++|.++-..
T Consensus 141 ~~~kvIav~s~KGGvGKTT~a~nLA~~La~~g~rVlliD~D 181 (373)
T 3fkq_A 141 DKSSVVIFTSPCGGVGTSTVAAACAIAHANMGKKVFYLNIE 181 (373)
T ss_dssp TSCEEEEEECSSTTSSHHHHHHHHHHHHHHHTCCEEEEECC
T ss_pred CCceEEEEECCCCCChHHHHHHHHHHHHHhCCCCEEEEECC
Confidence 34455 5544 478899999999999999999999999755
No 125
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=53.50 E-value=10 Score=29.88 Aligned_cols=34 Identities=24% Similarity=0.303 Sum_probs=25.1
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCc
Q 011789 8 KPHAIFISYPLQGHVNPSVQLALKLASQGFTITFVNTHF 46 (477)
Q Consensus 8 ~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~ 46 (477)
.|||+++-. |.+-- .+++.|.++||+|+++....
T Consensus 4 ~m~i~IiG~---G~iG~--~~a~~L~~~g~~v~~~d~~~ 37 (140)
T 1lss_A 4 GMYIIIAGI---GRVGY--TLAKSLSEKGHDIVLIDIDK 37 (140)
T ss_dssp -CEEEEECC---SHHHH--HHHHHHHHTTCEEEEEESCH
T ss_pred CCEEEEECC---CHHHH--HHHHHHHhCCCeEEEEECCH
Confidence 479988843 55543 57899999999999987643
No 126
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=53.50 E-value=13 Score=32.13 Aligned_cols=36 Identities=25% Similarity=0.331 Sum_probs=26.9
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCc
Q 011789 7 QKPHAIFISYPLQGHVNPSVQLALKLASQGFTITFVNTHF 46 (477)
Q Consensus 7 ~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~ 46 (477)
.||+|++. |+.|.+- ..|++.|.++||+|+.++-..
T Consensus 3 ~m~~ilIt--GatG~iG--~~l~~~L~~~g~~V~~~~r~~ 38 (227)
T 3dhn_A 3 KVKKIVLI--GASGFVG--SALLNEALNRGFEVTAVVRHP 38 (227)
T ss_dssp CCCEEEEE--TCCHHHH--HHHHHHHHTTTCEEEEECSCG
T ss_pred CCCEEEEE--cCCchHH--HHHHHHHHHCCCEEEEEEcCc
Confidence 46787766 5555554 467899999999999987654
No 127
>2i2x_B MTAC, methyltransferase 1; TIM barrel and helix bundle (MTAB), rossman fold and helix B (MTAC); HET: B13; 2.50A {Methanosarcina barkeri}
Probab=53.47 E-value=17 Score=32.65 Aligned_cols=43 Identities=9% Similarity=0.003 Sum_probs=37.3
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCcch
Q 011789 6 TQKPHAIFISYPLQGHVNPSVQLALKLASQGFTITFVNTHFIH 48 (477)
Q Consensus 6 ~~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~ 48 (477)
....+|++.+.++..|-....-++..|..+|++|.+++...-.
T Consensus 121 ~~~~~vlla~~~gd~HdiG~~iva~~L~~~G~~Vi~LG~~vp~ 163 (258)
T 2i2x_B 121 KTKGTVVCHVAEGDVHDIGKNIVTALLRANGYNVVDLGRDVPA 163 (258)
T ss_dssp CCSCEEEEEECTTCCCCHHHHHHHHHHHHTTCEEEEEEEECCS
T ss_pred CCCCeEEEEeCCCCccHHHHHHHHHHHHHCCCEEEECCCCCCH
Confidence 3457999999999999999999999999999999998754433
No 128
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=53.19 E-value=9.8 Score=35.03 Aligned_cols=34 Identities=15% Similarity=0.230 Sum_probs=26.7
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 011789 7 QKPHAIFISYPLQGHVNPSVQLALKLASQGFTITFVNTH 45 (477)
Q Consensus 7 ~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 45 (477)
.||||+|+-.|..|. .+|..|.++||+|+++...
T Consensus 2 ~~m~i~iiG~G~~G~-----~~a~~l~~~g~~V~~~~r~ 35 (316)
T 2ew2_A 2 NAMKIAIAGAGAMGS-----RLGIMLHQGGNDVTLIDQW 35 (316)
T ss_dssp --CEEEEECCSHHHH-----HHHHHHHHTTCEEEEECSC
T ss_pred CCCeEEEECcCHHHH-----HHHHHHHhCCCcEEEEECC
Confidence 368999998777774 5788999999999998754
No 129
>3tov_A Glycosyl transferase family 9; structural genomics, PSI-BIOL protein structure initiative, midwest center for structural genomics, MCSG; 2.98A {Veillonella parvula}
Probab=53.01 E-value=70 Score=29.94 Aligned_cols=100 Identities=8% Similarity=0.072 Sum_probs=58.1
Q ss_pred CcEEEEEcCCCcc--C--HHHHHHHHHHHHhCCCeEEEEeCCcchhhhccCCCCCCccccccccCCCCCeEEEecCCCCC
Q 011789 8 KPHAIFISYPLQG--H--VNPSVQLALKLASQGFTITFVNTHFIHQQMTKASPEMGSDIFAGVRKSGLDIRYMTLSDGLP 83 (477)
Q Consensus 8 ~~~il~~~~~~~G--H--~~p~l~La~~L~~rGh~Vt~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 83 (477)
..-|++.|..+.. . ..-+.+|++.|.++|++|.++..+...+....... .. .-....+..
T Consensus 185 ~~~i~i~pga~~~~k~wp~~~~~~l~~~l~~~g~~vvl~g~~~e~~~~~~i~~-----------~~--~~~~~~l~g--- 248 (349)
T 3tov_A 185 DILIGFNIGSAVPEKRWPAERFAHVADYFGRLGYKTVFFGGPMDLEMVQPVVE-----------QM--ETKPIVATG--- 248 (349)
T ss_dssp CCEEEEECCCSSGGGCCCHHHHHHHHHHHHHHTCEEEECCCTTTHHHHHHHHH-----------TC--SSCCEECTT---
T ss_pred CCEEEEeCCCCCccCCCCHHHHHHHHHHHHhCCCeEEEEeCcchHHHHHHHHH-----------hc--ccccEEeeC---
Confidence 3456666665433 1 34599999999999999998777765554321000 00 000111110
Q ss_pred CCCCCCCcHHHHHHHHHHHhHHHHHHHHHHhHhcCCCccEEEecCCCcchHHHHHHhCCceEEEec
Q 011789 84 LGFDRSLNHEQFMSSLLHVFSAHAEEVIGQIVRSGENVHCLIADTYFVWPSKLAKKFGLYYISFWT 149 (477)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~pD~iI~D~~~~~~~~~A~~~gIP~v~~~~ 149 (477)
..++. ++.+++. +-|++|+- ..+...+|..+|+|.|.++.
T Consensus 249 -----~~sl~------------e~~ali~-------~a~~~i~~--DsG~~HlAaa~g~P~v~lfg 288 (349)
T 3tov_A 249 -----KFQLG------------PLAAAMN-------RCNLLITN--DSGPMHVGISQGVPIVALYG 288 (349)
T ss_dssp -----CCCHH------------HHHHHHH-------TCSEEEEE--SSHHHHHHHTTTCCEEEECS
T ss_pred -----CCCHH------------HHHHHHH-------hCCEEEEC--CCCHHHHHHhcCCCEEEEEC
Confidence 11111 1223333 66999975 44678889999999999854
No 130
>3kjh_A CO dehydrogenase/acetyl-COA synthase complex, accessory protein COOC; Zn-bound dimer, nickel binding protein, ATPase; 1.90A {Carboxydothermus hydrogenoformans} PDB: 3kjg_A* 3kje_A 3kji_A*
Probab=52.80 E-value=11 Score=33.24 Aligned_cols=38 Identities=16% Similarity=-0.066 Sum_probs=33.1
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCc
Q 011789 9 PHAIFISYPLQGHVNPSVQLALKLASQGFTITFVNTHF 46 (477)
Q Consensus 9 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~ 46 (477)
|||+|..-|+.|=.--.+.||..|+++|++|.++-...
T Consensus 1 mkI~vs~kGGvGKTt~a~~LA~~la~~g~~VlliD~D~ 38 (254)
T 3kjh_A 1 MKLAVAGKGGVGKTTVAAGLIKIMASDYDKIYAVDGDP 38 (254)
T ss_dssp CEEEEECSSSHHHHHHHHHHHHHHTTTCSCEEEEEECT
T ss_pred CEEEEecCCCCCHHHHHHHHHHHHHHCCCeEEEEeCCC
Confidence 68999777888889999999999999999999986554
No 131
>3tqr_A Phosphoribosylglycinamide formyltransferase; purines, pyrimidines, nucleosides, nucleotides; HET: NHE; 1.97A {Coxiella burnetii} SCOP: c.65.1.0
Probab=52.73 E-value=87 Score=27.15 Aligned_cols=104 Identities=8% Similarity=0.117 Sum_probs=56.1
Q ss_pred CCCCcEEEEEcCCCccCHHHHHHHHHHHHh-CCCeEEEEeCCc-ch---hhh-ccCCCCCCccccccccCCCCCeEEEec
Q 011789 5 KTQKPHAIFISYPLQGHVNPSVQLALKLAS-QGFTITFVNTHF-IH---QQM-TKASPEMGSDIFAGVRKSGLDIRYMTL 78 (477)
Q Consensus 5 ~~~~~~il~~~~~~~GH~~p~l~La~~L~~-rGh~Vt~~~~~~-~~---~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~l 78 (477)
+..++||+++.+|..+-+...+ ++..+ .+++|..+.+.. .. +.. .. ++.+..+
T Consensus 2 ~~~~~riavl~SG~Gsnl~all---~~~~~~~~~eI~~Vis~~~~a~~~~~A~~~------------------gIp~~~~ 60 (215)
T 3tqr_A 2 NREPLPIVVLISGNGTNLQAII---GAIQKGLAIEIRAVISNRADAYGLKRAQQA------------------DIPTHII 60 (215)
T ss_dssp --CCEEEEEEESSCCHHHHHHH---HHHHTTCSEEEEEEEESCTTCHHHHHHHHT------------------TCCEEEC
T ss_pred CCCCcEEEEEEeCCcHHHHHHH---HHHHcCCCCEEEEEEeCCcchHHHHHHHHc------------------CCCEEEe
Confidence 4567899988887765555444 44433 368888766533 22 122 33 5666655
Q ss_pred CCC-CCCCCCCCCcHHHHHHHHHHHhHHHHHHHHHHhHhcCCCccEEEecCCCc-chHHHHHHhCCceEEEec
Q 011789 79 SDG-LPLGFDRSLNHEQFMSSLLHVFSAHAEEVIGQIVRSGENVHCLIADTYFV-WPSKLAKKFGLYYISFWT 149 (477)
Q Consensus 79 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~pD~iI~D~~~~-~~~~~A~~~gIP~v~~~~ 149 (477)
+.. ++ +- ....+.+.+.++++ +||++|+-.+.. -...+-+...-.++=+.+
T Consensus 61 ~~~~~~-------~r--------~~~d~~~~~~l~~~-----~~Dliv~agy~~il~~~~l~~~~~~~iNiHp 113 (215)
T 3tqr_A 61 PHEEFP-------SR--------TDFESTLQKTIDHY-----DPKLIVLAGFMRKLGKAFVSHYSGRMINIHP 113 (215)
T ss_dssp CGGGSS-------SH--------HHHHHHHHHHHHTT-----CCSEEEESSCCSCCCHHHHHHTTTSEEEEES
T ss_pred CccccC-------ch--------hHhHHHHHHHHHhc-----CCCEEEEccchhhCCHHHHhhccCCeEEeCc
Confidence 421 11 00 11122333444444 999999876644 455566666666666633
No 132
>3ezx_A MMCP 1, monomethylamine corrinoid protein 1; N terminal all helical bundle C terminal rossmann fold, cobalt, metal-binding; HET: HCB; 2.56A {Methanosarcina barkeri}
Probab=52.72 E-value=20 Score=31.29 Aligned_cols=46 Identities=15% Similarity=0.117 Sum_probs=38.7
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCcchhhh
Q 011789 6 TQKPHAIFISYPLQGHVNPSVQLALKLASQGFTITFVNTHFIHQQM 51 (477)
Q Consensus 6 ~~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~~ 51 (477)
....||++.+.++..|-....-++..|..+|++|.+++...-.+.+
T Consensus 90 ~~~~~vll~~v~gd~HdiG~~iv~~~l~~~G~~Vi~LG~~vp~e~i 135 (215)
T 3ezx_A 90 EEAGLAITFVAEGDIHDIGHRLVTTMLGANGFQIVDLGVDVLNENV 135 (215)
T ss_dssp --CCEEEEEECTTCCCCHHHHHHHHHHHHTSCEEEECCSSCCHHHH
T ss_pred CCCCeEEEEeCCCChhHHHHHHHHHHHHHCCCeEEEcCCCCCHHHH
Confidence 4567999999999999999999999999999999999875544444
No 133
>3dii_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3dij_A* 3ged_A 3geg_A*
Probab=52.37 E-value=84 Score=27.46 Aligned_cols=36 Identities=14% Similarity=0.240 Sum_probs=26.0
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCc
Q 011789 8 KPHAIFISYPLQGHVNPSVQLALKLASQGFTITFVNTHF 46 (477)
Q Consensus 8 ~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~ 46 (477)
|.|.++++.++.| --..+++.|+++|++|.++....
T Consensus 1 m~k~vlVTGas~g---IG~~ia~~l~~~G~~V~~~~r~~ 36 (247)
T 3dii_A 1 MNRGVIVTGGGHG---IGKQICLDFLEAGDKVCFIDIDE 36 (247)
T ss_dssp -CCEEEEESTTSH---HHHHHHHHHHHTTCEEEEEESCH
T ss_pred CCCEEEEECCCCH---HHHHHHHHHHHCCCEEEEEeCCH
Confidence 4567777776654 23578999999999999876543
No 134
>3pdi_B Nitrogenase MOFE cofactor biosynthesis protein NI; nitrogenase cofactor maturation, NIFB, nifdk, NIFH; HET: CZL; 2.40A {Azotobacter vinelandii}
Probab=52.28 E-value=60 Score=31.86 Aligned_cols=87 Identities=11% Similarity=0.036 Sum_probs=52.4
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCcchhhhccCCCCCCccccccccCCCCCeEEEecCCCCCCCCC
Q 011789 8 KPHAIFISYPLQGHVNPSVQLALKLASQGFTITFVNTHFIHQQMTKASPEMGSDIFAGVRKSGLDIRYMTLSDGLPLGFD 87 (477)
Q Consensus 8 ~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 87 (477)
.+|++++.- -.-.+.|++-|.+-|-+|..+.+....+..... . ...-
T Consensus 313 Gkrv~i~~~-----~~~~~~l~~~L~elGm~vv~~~~~~~~~~~~~~-----------------~-----------~~~v 359 (458)
T 3pdi_B 313 SARTAIAAD-----PDLLLGFDALLRSMGAHTVAAVVPARAAALVDS-----------------P-----------LPSV 359 (458)
T ss_dssp TCEEEEECC-----HHHHHHHHHHHHTTTCEEEEEEESSCCSCCTTT-----------------T-----------SSCE
T ss_pred CCEEEEECC-----cHHHHHHHHHHHHCCCEEEEEEECCCChhhhhC-----------------c-----------cCcE
Confidence 357777533 244567888888889999888766532221110 0 0000
Q ss_pred CCCcHHHHHHHHHHHhHHHHHHHHHHhHhcCCCccEEEecCCCcchHHHHHHhCCceEEE
Q 011789 88 RSLNHEQFMSSLLHVFSAHAEEVIGQIVRSGENVHCLIADTYFVWPSKLAKKFGLYYISF 147 (477)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~pD~iI~D~~~~~~~~~A~~~gIP~v~~ 147 (477)
... ++. .++++++.. +||++|.... ...+|+++|||++.+
T Consensus 360 ~~~-------D~~-----~le~~i~~~-----~pDllig~~~---~~~~a~k~gip~~~~ 399 (458)
T 3pdi_B 360 RVG-------DLE-----DLEHAARAG-----QAQLVIGNSH---ALASARRLGVPLLRA 399 (458)
T ss_dssp EES-------HHH-----HHHHHHHHH-----TCSEEEECTT---HHHHHHHTTCCEEEC
T ss_pred EeC-------CHH-----HHHHHHHhc-----CCCEEEEChh---HHHHHHHcCCCEEEe
Confidence 001 111 134445554 9999999853 578999999999986
No 135
>3ouz_A Biotin carboxylase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta fold, cytosol, LIG; HET: MSE ADP SRT TLA; 1.90A {Campylobacter jejuni subsp} PDB: 3ouu_A*
Probab=51.81 E-value=39 Score=32.92 Aligned_cols=37 Identities=8% Similarity=0.042 Sum_probs=26.5
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCcc
Q 011789 6 TQKPHAIFISYPLQGHVNPSVQLALKLASQGFTITFVNTHFI 47 (477)
Q Consensus 6 ~~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~ 47 (477)
+.|+||+++-. |. -.+.+++++++.|++|.++.+...
T Consensus 4 m~~~kiLI~g~---g~--~a~~i~~aa~~~G~~~v~v~~~~~ 40 (446)
T 3ouz_A 4 MEIKSILIANR---GE--IALRALRTIKEMGKKAICVYSEAD 40 (446)
T ss_dssp TCCCEEEECCC---HH--HHHHHHHHHHHTTCEEEEEEEGGG
T ss_pred cccceEEEECC---CH--HHHHHHHHHHHcCCEEEEEEcCcc
Confidence 34567777542 22 457899999999999998865544
No 136
>2c5m_A CTP synthase; cytidine 5-prime triphosphate synthetase, CTP synthetase, UTP, glutamine, amidotransferase, ligase, phosphorylation; 2.80A {Homo sapiens} PDB: 2vo1_A 3ihl_A*
Probab=51.61 E-value=10 Score=33.95 Aligned_cols=42 Identities=17% Similarity=0.055 Sum_probs=34.3
Q ss_pred CCcEEEEEcCC---CccCHHHHHHHHHHHHhCCCeEEEEeCCcch
Q 011789 7 QKPHAIFISYP---LQGHVNPSVQLALKLASQGFTITFVNTHFIH 48 (477)
Q Consensus 7 ~~~~il~~~~~---~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~ 48 (477)
.+||.+|++.| +.|-=.-...|+..|++||++||..=..++-
T Consensus 21 ~~mKyIfVTGGVvSglGKGi~aaSlG~LLk~rG~~Vt~~KiDPYl 65 (294)
T 2c5m_A 21 QSMKYILVTGGVISGIGKGIIASSVGTILKSCGLHVTSIKIDPYI 65 (294)
T ss_dssp CCCEEEEEEECSSTTSCHHHHHHHHHHHHHTTTCCEECCEEECBC
T ss_pred eceEEEEEcCccccccchHHHHHHHHHHHHHCCCeeEEEecCCce
Confidence 56899999987 5566778899999999999999987655543
No 137
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=51.44 E-value=16 Score=33.83 Aligned_cols=36 Identities=19% Similarity=0.372 Sum_probs=29.2
Q ss_pred CCCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 011789 5 KTQKPHAIFISYPLQGHVNPSVQLALKLASQGFTITFVNTH 45 (477)
Q Consensus 5 ~~~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 45 (477)
...||||.|+-.|..| ..+|+.|+++||+|+++...
T Consensus 18 ~~~m~~I~iIG~G~mG-----~~~A~~l~~~G~~V~~~dr~ 53 (310)
T 3doj_A 18 GSHMMEVGFLGLGIMG-----KAMSMNLLKNGFKVTVWNRT 53 (310)
T ss_dssp CCCSCEEEEECCSHHH-----HHHHHHHHHTTCEEEEECSS
T ss_pred cccCCEEEEECccHHH-----HHHHHHHHHCCCeEEEEeCC
Confidence 4578999999777666 56889999999999987544
No 138
>1gsa_A Glutathione synthetase; ligase; HET: ADP GSH; 2.00A {Escherichia coli} SCOP: c.30.1.3 d.142.1.1 PDB: 1gsh_A 2glt_A 1glv_A
Probab=50.60 E-value=13 Score=34.02 Aligned_cols=38 Identities=11% Similarity=0.253 Sum_probs=28.8
Q ss_pred CcEEEEEcCCCccC---HHHHHHHHHHHHhCCCeEEEEeCC
Q 011789 8 KPHAIFISYPLQGH---VNPSVQLALKLASQGFTITFVNTH 45 (477)
Q Consensus 8 ~~~il~~~~~~~GH---~~p~l~La~~L~~rGh~Vt~~~~~ 45 (477)
||||+++..+.... ......++++|.++||+|.++...
T Consensus 1 mm~i~il~~~~~~~~~~~~s~~~l~~a~~~~G~~v~~~d~~ 41 (316)
T 1gsa_A 1 MIKLGIVMDPIANINIKKDSSFAMLLEAQRRGYELHYMEMG 41 (316)
T ss_dssp CCEEEEECSCGGGCCTTTCHHHHHHHHHHHTTCEEEEECGG
T ss_pred CceEEEEeCcHHhCCcCCChHHHHHHHHHHCCCEEEEEchh
Confidence 57999999874321 233467999999999999998764
No 139
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=50.53 E-value=12 Score=29.82 Aligned_cols=35 Identities=23% Similarity=0.232 Sum_probs=26.4
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCc
Q 011789 7 QKPHAIFISYPLQGHVNPSVQLALKLASQGFTITFVNTHF 46 (477)
Q Consensus 7 ~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~ 46 (477)
.|+||+++-.|..| ..+++.|.++||+|+++....
T Consensus 5 ~~~~v~I~G~G~iG-----~~la~~L~~~g~~V~~id~~~ 39 (141)
T 3llv_A 5 GRYEYIVIGSEAAG-----VGLVRELTAAGKKVLAVDKSK 39 (141)
T ss_dssp -CCSEEEECCSHHH-----HHHHHHHHHTTCCEEEEESCH
T ss_pred CCCEEEEECCCHHH-----HHHHHHHHHCCCeEEEEECCH
Confidence 46788888664333 568999999999999987654
No 140
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=49.70 E-value=14 Score=34.00 Aligned_cols=34 Identities=18% Similarity=0.310 Sum_probs=27.9
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 011789 7 QKPHAIFISYPLQGHVNPSVQLALKLASQGFTITFVNTH 45 (477)
Q Consensus 7 ~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 45 (477)
+||||.|+-.|..|. .+|+.|+++||+|+++...
T Consensus 2 ~m~~I~iiG~G~mG~-----~~a~~l~~~G~~V~~~d~~ 35 (302)
T 2h78_A 2 HMKQIAFIGLGHMGA-----PMATNLLKAGYLLNVFDLV 35 (302)
T ss_dssp -CCEEEEECCSTTHH-----HHHHHHHHTTCEEEEECSS
T ss_pred CCCEEEEEeecHHHH-----HHHHHHHhCCCeEEEEcCC
Confidence 589999998888774 6789999999999988543
No 141
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=49.33 E-value=11 Score=35.76 Aligned_cols=38 Identities=21% Similarity=0.151 Sum_probs=30.4
Q ss_pred CCCCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCc
Q 011789 4 NKTQKPHAIFISYPLQGHVNPSVQLALKLASQGFTITFVNTHF 46 (477)
Q Consensus 4 ~~~~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~ 46 (477)
|+..+|||.|+-.|..|. .+|..|++.||+|++.....
T Consensus 25 m~~~~mkI~VIGaG~mG~-----alA~~La~~G~~V~l~~r~~ 62 (356)
T 3k96_A 25 MEPFKHPIAILGAGSWGT-----ALALVLARKGQKVRLWSYES 62 (356)
T ss_dssp --CCCSCEEEECCSHHHH-----HHHHHHHTTTCCEEEECSCH
T ss_pred ccccCCeEEEECccHHHH-----HHHHHHHHCCCeEEEEeCCH
Confidence 334568999999988884 58899999999999988753
No 142
>1o4v_A Phosphoribosylaminoimidazole mutase PURE; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; 1.77A {Thermotoga maritima} SCOP: c.23.8.1
Probab=48.87 E-value=1.2e+02 Score=25.46 Aligned_cols=139 Identities=12% Similarity=0.087 Sum_probs=73.1
Q ss_pred cEEEEEecccccCCHHHHHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCchhHHHhcCCCeEEEeeccHHHhhccCCCCc
Q 011789 283 SVLYVSFGSYAHVSKRDLIEIANGIAKSKVTFIWILRPDIVSSDDPNPLPEDFKKEVADRSMIITWCCQTSVLAHPAIGG 362 (477)
Q Consensus 283 ~~I~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~lp~~~~~~~~~nv~v~~~~p~~~lL~~~~~~~ 362 (477)
|.|-|-+||.. +....++....++..|..+-+.+-+. ...|+...+-. .+ .....+++
T Consensus 14 ~~V~IimGS~S--D~~v~~~a~~~L~~~Gi~~dv~V~Sa-------HR~p~~l~~~~----------~~---a~~~g~~V 71 (183)
T 1o4v_A 14 PRVGIIMGSDS--DLPVMKQAAEILEEFGIDYEITIVSA-------HRTPDRMFEYA----------KN---AEERGIEV 71 (183)
T ss_dssp CEEEEEESCGG--GHHHHHHHHHHHHHTTCEEEEEECCT-------TTCHHHHHHHH----------HH---TTTTTCCE
T ss_pred CeEEEEeccHH--HHHHHHHHHHHHHHcCCCeEEEEEcc-------cCCHHHHHHHH----------HH---HHhCCCcE
Confidence 57778788876 56677888888999999876666544 34555332110 00 00112233
Q ss_pred cccccCCchhhHHH---hcCcceeccccccc--hhhHHH-HHHhh-hcc--eeeecCCC-CcCHHHHHHHHHHHhcCCch
Q 011789 363 FLTHCGWNSVLEGL---WCGVPLLCFPLYTD--QFTNRK-LAVDD-WNV--GLNLSNEK-VITKEEVSKNVHLLMGEKSG 432 (477)
Q Consensus 363 ~ItHgG~gs~~eal---~~GvP~v~~P~~~D--Q~~na~-~v~~~-~G~--G~~~~~~~-~~~~~~l~~~i~~~l~~~~~ 432 (477)
+|.=.|+-.-+-.+ ..-+|+|.+|.... ....+. -+.+. -|+ +.... + -+++.-++..|. -+.|+
T Consensus 72 iIa~AG~aa~LpgvvA~~t~~PVIgVP~~~~~l~G~dsLlSivqmP~GvpVatV~I--d~~~nAa~lAaqIl-a~~d~-- 146 (183)
T 1o4v_A 72 IIAGAGGAAHLPGMVASITHLPVIGVPVKTSTLNGLDSLFSIVQMPGGVPVATVAI--NNAKNAGILAASIL-GIKYP-- 146 (183)
T ss_dssp EEEEEESSCCHHHHHHHHCSSCEEEEEECCTTTTTHHHHHHHHTCCTTCCCEECCT--TCHHHHHHHHHHHH-HTTCH--
T ss_pred EEEecCcccccHHHHHhccCCCEEEeeCCCCCCCcHHHHHHHhcCCCCCeeEEEec--CCchHHHHHHHHHH-hcCCH--
Confidence 66666643222222 25568888887432 112221 12221 022 21211 2 334444544443 35677
Q ss_pred HHHHHHHHHHHHHHHHH
Q 011789 433 AKYRNAAKQVKKAMEYA 449 (477)
Q Consensus 433 ~~~~~~a~~l~~~~~~~ 449 (477)
+++++.+..++++...
T Consensus 147 -~l~~kL~~~r~~~~~~ 162 (183)
T 1o4v_A 147 -EIARKVKEYKERMKRE 162 (183)
T ss_dssp -HHHHHHHHHHHHHHHH
T ss_pred -HHHHHHHHHHHHHHHH
Confidence 7888888888877764
No 143
>3dm5_A SRP54, signal recognition 54 kDa protein; protein-RNA, signal recognition particle, SRP-GTPase, protein targeting, cytoplasm, GTP-binding; HET: GDP; 2.51A {Pyrococcus furiosus}
Probab=48.87 E-value=1e+02 Score=29.99 Aligned_cols=42 Identities=12% Similarity=0.213 Sum_probs=36.4
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCcchh
Q 011789 8 KPHAIFISYPLQGHVNPSVQLALKLASQGFTITFVNTHFIHQ 49 (477)
Q Consensus 8 ~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~ 49 (477)
+..|+++..++.|=..-...||..|+++|++|.++..+.+..
T Consensus 100 p~vIlivG~~G~GKTTt~~kLA~~l~~~G~kVllv~~D~~R~ 141 (443)
T 3dm5_A 100 PTILLMVGIQGSGKTTTVAKLARYFQKRGYKVGVVCSDTWRP 141 (443)
T ss_dssp SEEEEEECCTTSSHHHHHHHHHHHHHTTTCCEEEEECCCSST
T ss_pred CeEEEEECcCCCCHHHHHHHHHHHHHHCCCeEEEEeCCCcch
Confidence 456777777899999999999999999999999999877644
No 144
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=48.55 E-value=16 Score=29.58 Aligned_cols=33 Identities=21% Similarity=0.330 Sum_probs=25.9
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 011789 8 KPHAIFISYPLQGHVNPSVQLALKLASQGFTITFVNTH 45 (477)
Q Consensus 8 ~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 45 (477)
..||+++-. |++- ..+++.|.++||+|+++...
T Consensus 3 ~~~vlI~G~---G~vG--~~la~~L~~~g~~V~vid~~ 35 (153)
T 1id1_A 3 KDHFIVCGH---SILA--INTILQLNQRGQNVTVISNL 35 (153)
T ss_dssp CSCEEEECC---SHHH--HHHHHHHHHTTCCEEEEECC
T ss_pred CCcEEEECC---CHHH--HHHHHHHHHCCCCEEEEECC
Confidence 457888844 4444 67899999999999999875
No 145
>4b4k_A N5-carboxyaminoimidazole ribonucleotide mutase; isomerase; 2.50A {Bacillus anthracis}
Probab=48.04 E-value=1.2e+02 Score=25.32 Aligned_cols=139 Identities=12% Similarity=0.127 Sum_probs=78.8
Q ss_pred CcEEEEEecccccCCHHHHHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCchhHHHhcCCCeEEEeeccHHHhhccCCCC
Q 011789 282 GSVLYVSFGSYAHVSKRDLIEIANGIAKSKVTFIWILRPDIVSSDDPNPLPEDFKKEVADRSMIITWCCQTSVLAHPAIG 361 (477)
Q Consensus 282 ~~~I~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~lp~~~~~~~~~nv~v~~~~p~~~lL~~~~~~ 361 (477)
+|.|-|-+||.. +....++..+.|+..+..+-..+-+. ...|+...+-. .-.....++
T Consensus 22 kp~V~IimGS~S--D~~v~~~a~~~L~~~gI~~e~~V~SA-------HRtp~~l~~~~-------------~~a~~~g~~ 79 (181)
T 4b4k_A 22 KSLVGVIMGSTS--DWETMKYACDILDELNIPYEKKVVSA-------HRTPDYMFEYA-------------ETARERGLK 79 (181)
T ss_dssp CCSEEEEESSGG--GHHHHHHHHHHHHHTTCCEEEEECCT-------TTSHHHHHHHH-------------HHTTTTTCC
T ss_pred CccEEEEECCHh--HHHHHHHHHHHHHHcCCCeeEEEEcc-------ccChHHHHHHH-------------HHHHhcCce
Confidence 457878889876 45667888889999998876666544 34555322110 001112334
Q ss_pred ccccccCCchhhHHH---hcCcceecccccc---chhhHHHHHHhhhcceeeecCCC-CcC------HHHHHHHHHHHhc
Q 011789 362 GFLTHCGWNSVLEGL---WCGVPLLCFPLYT---DQFTNRKLAVDDWNVGLNLSNEK-VIT------KEEVSKNVHLLMG 428 (477)
Q Consensus 362 ~~ItHgG~gs~~eal---~~GvP~v~~P~~~---DQ~~na~~v~~~~G~G~~~~~~~-~~~------~~~l~~~i~~~l~ 428 (477)
++|.=.|.-.-+-++ ..-+|+|.+|... +-.+.-.-+.+. =-|+-+. . ..+ +.-++..|- .+.
T Consensus 80 ViIa~AG~aahLpGvvAa~T~~PVIGVPv~s~~l~G~DsLlSivQM-P~GvpVa--Tvaig~~ga~NAallA~qIL-a~~ 155 (181)
T 4b4k_A 80 VIIAGAGGAAHLPGMVAAKTNLPVIGVPVQSKALNGLDSLLSIVQM-PGGVPVA--TVAIGKAGSTNAGLLAAQIL-GSF 155 (181)
T ss_dssp EEEEEECSSCCHHHHHHTTCCSCEEEEECCCTTTTTHHHHHHHHTC-CTTCCCE--ECCSSHHHHHHHHHHHHHHH-TTT
T ss_pred EEEEeccccccchhhHHhcCCCCEEEEecCCCCccchhhHHHHHhC-CCCCceE--EEecCCccHHHHHHHHHHHH-ccC
Confidence 466666653323222 3456999999853 444555556655 4454442 1 222 222322221 245
Q ss_pred CCchHHHHHHHHHHHHHHHHH
Q 011789 429 EKSGAKYRNAAKQVKKAMEYA 449 (477)
Q Consensus 429 ~~~~~~~~~~a~~l~~~~~~~ 449 (477)
|+ +++++.+..++++++.
T Consensus 156 d~---~l~~kl~~~r~~~~~~ 173 (181)
T 4b4k_A 156 HD---DIHDALELRREAIEKD 173 (181)
T ss_dssp CH---HHHHHHHHHHHHHHHH
T ss_pred CH---HHHHHHHHHHHHHHHH
Confidence 77 8888888888877754
No 146
>3cio_A ETK, tyrosine-protein kinase ETK; WZC, escherichia coli tyrosine kinase domain, signaling protein, transferase, inner membrane, membrane; 2.50A {Escherichia coli}
Probab=47.90 E-value=85 Score=28.65 Aligned_cols=39 Identities=21% Similarity=0.324 Sum_probs=30.5
Q ss_pred CcEEEEEcC--CCccCHHHHHHHHHHHHhCCCeEEEEeCCc
Q 011789 8 KPHAIFISY--PLQGHVNPSVQLALKLASQGFTITFVNTHF 46 (477)
Q Consensus 8 ~~~il~~~~--~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~ 46 (477)
.+++++++. |+.|=..-.+.||..|+++|.+|.++-...
T Consensus 103 ~~kvI~vts~kgG~GKTtva~nLA~~lA~~G~rVLLID~D~ 143 (299)
T 3cio_A 103 ENNILMITGATPDSGKTFVSSTLAAVIAQSDQKVLFIDADL 143 (299)
T ss_dssp SCCEEEEEESSSSSCHHHHHHHHHHHHHHTTCCEEEEECCT
T ss_pred CCeEEEEECCCCCCChHHHHHHHHHHHHhCCCcEEEEECCC
Confidence 345544443 678888899999999999999999987554
No 147
>3io3_A DEHA2D07832P; chaperone, membrane traffic, ATPase; HET: ADP; 1.80A {Debaryomyces hansenii}
Probab=47.90 E-value=69 Score=30.10 Aligned_cols=41 Identities=22% Similarity=0.224 Sum_probs=34.0
Q ss_pred CcEEEEEcC-CCccCHHHHHHHHHHHH--hCCCeEEEEeCCcch
Q 011789 8 KPHAIFISY-PLQGHVNPSVQLALKLA--SQGFTITFVNTHFIH 48 (477)
Q Consensus 8 ~~~il~~~~-~~~GH~~p~l~La~~L~--~rGh~Vt~~~~~~~~ 48 (477)
.++|+|++. |+.|=..-...||..|+ ++|++|.++......
T Consensus 17 ~~~i~~~~gkGGvGKTt~a~~lA~~la~~~~g~~vllid~D~~~ 60 (348)
T 3io3_A 17 SLKWIFVGGKGGVGKTTTSSSVAVQLALAQPNEQFLLISTDPAH 60 (348)
T ss_dssp TCSEEEEECSTTSSHHHHHHHHHHHHHHHCTTSCEEEEECCSSC
T ss_pred CcEEEEEeCCCCCcHHHHHHHHHHHHHHhcCCCeEEEEECCCCC
Confidence 356666655 78899999999999999 899999999987543
No 148
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=47.81 E-value=24 Score=32.61 Aligned_cols=39 Identities=10% Similarity=0.065 Sum_probs=30.9
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCcchhhh-cc
Q 011789 9 PHAIFISYPLQGHVNPSVQLALKLASQGFTITFVNTHFIHQQM-TK 53 (477)
Q Consensus 9 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~~-~~ 53 (477)
|||+++-.|+.|- .+|..|++.||+|+++.... .+.+ ..
T Consensus 3 mkI~IiGaGaiG~-----~~a~~L~~~g~~V~~~~r~~-~~~i~~~ 42 (312)
T 3hn2_A 3 LRIAIVGAGALGL-----YYGALLQRSGEDVHFLLRRD-YEAIAGN 42 (312)
T ss_dssp -CEEEECCSTTHH-----HHHHHHHHTSCCEEEECSTT-HHHHHHT
T ss_pred CEEEEECcCHHHH-----HHHHHHHHCCCeEEEEEcCc-HHHHHhC
Confidence 7999999999884 46889999999999998766 3555 44
No 149
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=47.80 E-value=11 Score=35.31 Aligned_cols=40 Identities=18% Similarity=0.142 Sum_probs=31.4
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCcchhhh
Q 011789 7 QKPHAIFISYPLQGHVNPSVQLALKLASQGFTITFVNTHFIHQQM 51 (477)
Q Consensus 7 ~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~~ 51 (477)
++|||+++-.|+.|- .+|..|++.||+|+++......+.+
T Consensus 2 ~~mkI~IiGaG~~G~-----~~a~~L~~~g~~V~~~~r~~~~~~~ 41 (335)
T 3ghy_A 2 SLTRICIVGAGAVGG-----YLGARLALAGEAINVLARGATLQAL 41 (335)
T ss_dssp CCCCEEEESCCHHHH-----HHHHHHHHTTCCEEEECCHHHHHHH
T ss_pred CCCEEEEECcCHHHH-----HHHHHHHHCCCEEEEEEChHHHHHH
Confidence 368999998888874 5789999999999999875434444
No 150
>1qgu_B Protein (nitrogenase molybdenum iron protein); biological nitrogen fixation, nitrogen metabolism, molybdoenzymes, electron transfer; HET: HCA CFM CLF; 1.60A {Klebsiella pneumoniae} SCOP: c.92.2.3 PDB: 1h1l_B* 1qh1_B* 1qh8_B*
Probab=47.57 E-value=1.3e+02 Score=30.03 Aligned_cols=35 Identities=14% Similarity=0.005 Sum_probs=24.0
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCcc
Q 011789 8 KPHAIFISYPLQGHVNPSVQLALKLASQGFTITFVNTHFI 47 (477)
Q Consensus 8 ~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~ 47 (477)
.+|++++. .-.-.+.|++.|.+.|-+|..+.+...
T Consensus 360 Gkrv~i~g-----d~~~~~~la~~L~ElGm~vv~v~~~~~ 394 (519)
T 1qgu_B 360 GKKFGLYG-----DPDFVMGLTRFLLELGCEPTVILSHNA 394 (519)
T ss_dssp TCEEEEES-----CHHHHHHHHHHHHHTTCEEEEEEETTC
T ss_pred CCEEEEEC-----CchHHHHHHHHHHHCCCEEEEEEeCCC
Confidence 35777773 334466778888888998887655443
No 151
>3kkl_A Probable chaperone protein HSP33; peptidase, heat shock protein, hydrolase, protease, stress response; 2.03A {Saccharomyces cerevisiae} PDB: 3mii_A*
Probab=47.23 E-value=29 Score=30.90 Aligned_cols=41 Identities=17% Similarity=0.188 Sum_probs=29.9
Q ss_pred CCcEEEEEcCCCcc-----------CHHHHHHHHHHHHhCCCeEEEEeCCcc
Q 011789 7 QKPHAIFISYPLQG-----------HVNPSVQLALKLASQGFTITFVNTHFI 47 (477)
Q Consensus 7 ~~~~il~~~~~~~G-----------H~~p~l~La~~L~~rGh~Vt~~~~~~~ 47 (477)
+|+||+|+.....+ ...=++.....|.+.|++|+++++...
T Consensus 2 ~m~kvlivlt~~~~~~~~~g~~tG~~~~E~~~p~~~l~~aG~~V~iaS~~g~ 53 (244)
T 3kkl_A 2 TPKRALISLTSYHGPFYKDGAKTGVFVVEILRSFDTFEKHGFEVDFVSETGG 53 (244)
T ss_dssp -CCEEEEECCCCCCCCSTTSCCCCBCHHHHHHHHHHHHTTTCEEEEEESSSC
T ss_pred CCCEEEEEECCCCcccCCCCCcCcccHHHHHHHHHHHHHCCCEEEEEeCCCC
Confidence 37899998886422 224467778888999999999997543
No 152
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=46.71 E-value=22 Score=32.99 Aligned_cols=35 Identities=17% Similarity=0.327 Sum_probs=28.9
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 011789 6 TQKPHAIFISYPLQGHVNPSVQLALKLASQGFTITFVNTH 45 (477)
Q Consensus 6 ~~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 45 (477)
..+|||.|+-.|..| ..+|+.|+++||+|+++...
T Consensus 29 ~~~~~I~iIG~G~mG-----~~~a~~l~~~G~~V~~~dr~ 63 (320)
T 4dll_A 29 PYARKITFLGTGSMG-----LPMARRLCEAGYALQVWNRT 63 (320)
T ss_dssp CCCSEEEEECCTTTH-----HHHHHHHHHTTCEEEEECSC
T ss_pred cCCCEEEEECccHHH-----HHHHHHHHhCCCeEEEEcCC
Confidence 356899999888887 56889999999999987544
No 153
>2a5l_A Trp repressor binding protein WRBA; APC5760, PA0949, protein structure initiative, PSI, structural genomics; 1.70A {Pseudomonas aeruginosa} SCOP: c.23.5.8 PDB: 1zwk_A 1zwl_A*
Probab=46.34 E-value=25 Score=29.75 Aligned_cols=40 Identities=15% Similarity=0.266 Sum_probs=28.8
Q ss_pred CCcEEEEEcCCCccCHHHHHH-HHHHHHhCCCeEEEEeCCc
Q 011789 7 QKPHAIFISYPLQGHVNPSVQ-LALKLASQGFTITFVNTHF 46 (477)
Q Consensus 7 ~~~~il~~~~~~~GH~~p~l~-La~~L~~rGh~Vt~~~~~~ 46 (477)
.||||+++-....|+..-+.. +++.|.+.|++|.++.-..
T Consensus 4 ~M~kilii~~S~~g~T~~la~~i~~~l~~~g~~v~~~~l~~ 44 (200)
T 2a5l_A 4 SSPYILVLYYSRHGATAEMARQIARGVEQGGFEARVRTVPA 44 (200)
T ss_dssp -CCEEEEEECCSSSHHHHHHHHHHHHHHHTTCEEEEEBCCC
T ss_pred CcceEEEEEeCCCChHHHHHHHHHHHHhhCCCEEEEEEhhh
Confidence 578998887777888776655 4667777899998875443
No 154
>1efp_B ETF, protein (electron transfer flavoprotein); electron transport, glutaric acidemia type II; HET: FAD AMP; 2.60A {Paracoccus denitrificans} SCOP: c.26.2.3
Probab=45.58 E-value=1.6e+02 Score=26.07 Aligned_cols=30 Identities=20% Similarity=0.169 Sum_probs=24.7
Q ss_pred CccEEEecCCCc------chHHHHHHhCCceEEEec
Q 011789 120 NVHCLIADTYFV------WPSKLAKKFGLYYISFWT 149 (477)
Q Consensus 120 ~pD~iI~D~~~~------~~~~~A~~~gIP~v~~~~ 149 (477)
+||+||+..-.. -+..+|..+|+|++...+
T Consensus 113 ~~dlVl~G~~s~d~~~~~v~p~lA~~L~~~~vt~v~ 148 (252)
T 1efp_B 113 GTELIIAGKQAIDNDMNATGQMLAAILGWAQATFAS 148 (252)
T ss_dssp TCSEEEEESCCTTTCCCCHHHHHHHHHTCEEEEEEE
T ss_pred CCCEEEEcCCccCCchhhHHHHHHHHhCCCccccEE
Confidence 899999876542 578899999999998744
No 155
>3u7q_A Nitrogenase molybdenum-iron protein alpha chain; multiple rossmann fold domains, reductase, nitrogen fixing, oxidoreductase; HET: HCA ICS 1CL CLF; 1.00A {Azotobacter vinelandii} SCOP: c.92.2.3 PDB: 1g21_A* 1g20_A* 1fp4_A* 1m1n_A* 1l5h_A* 1m1y_A* 1m34_A* 1n2c_A* 2afh_A* 2afi_A* 2afk_A* 2min_A* 3min_A* 3k1a_A* 1h1l_A* 1qgu_A* 1qh1_A* 1qh8_A*
Probab=45.42 E-value=92 Score=30.85 Aligned_cols=25 Identities=8% Similarity=0.098 Sum_probs=21.4
Q ss_pred CccEEEecCCCcchHHHHHHhCCceEEE
Q 011789 120 NVHCLIADTYFVWPSKLAKKFGLYYISF 147 (477)
Q Consensus 120 ~pD~iI~D~~~~~~~~~A~~~gIP~v~~ 147 (477)
+||++|... ....+|+++|||++.+
T Consensus 417 ~pDL~ig~~---~~~~ia~k~gIP~~~~ 441 (492)
T 3u7q_A 417 KPDLIGSGI---KEKFIFQKMGIPFREM 441 (492)
T ss_dssp CCSEEEECH---HHHHHHHHTTCCEEES
T ss_pred CCcEEEeCc---chhHHHHHcCCCEEec
Confidence 999999963 4578999999999864
No 156
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=45.06 E-value=15 Score=27.71 Aligned_cols=35 Identities=11% Similarity=0.286 Sum_probs=25.1
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHhCC-CeEEEEeCCc
Q 011789 7 QKPHAIFISYPLQGHVNPSVQLALKLASQG-FTITFVNTHF 46 (477)
Q Consensus 7 ~~~~il~~~~~~~GH~~p~l~La~~L~~rG-h~Vt~~~~~~ 46 (477)
.+|+|+++-. |.+- ..+++.|.++| |+|+++....
T Consensus 4 ~~~~v~I~G~---G~iG--~~~~~~l~~~g~~~v~~~~r~~ 39 (118)
T 3ic5_A 4 MRWNICVVGA---GKIG--QMIAALLKTSSNYSVTVADHDL 39 (118)
T ss_dssp TCEEEEEECC---SHHH--HHHHHHHHHCSSEEEEEEESCH
T ss_pred CcCeEEEECC---CHHH--HHHHHHHHhCCCceEEEEeCCH
Confidence 4578888744 4333 46788999999 9998877644
No 157
>3to5_A CHEY homolog; alpha(5)beta(5), chemotaxis, FLIM, phosphorylation, motor AC signaling protein; 1.65A {Vibrio cholerae}
Probab=44.85 E-value=33 Score=27.22 Aligned_cols=32 Identities=16% Similarity=0.125 Sum_probs=24.9
Q ss_pred CccEEEecCCCc--chHHHHHHh-------CCceEEEecch
Q 011789 120 NVHCLIADTYFV--WPSKLAKKF-------GLYYISFWTES 151 (477)
Q Consensus 120 ~pD~iI~D~~~~--~~~~~A~~~-------gIP~v~~~~~~ 151 (477)
+||+||.|...+ .|..+++++ .+|++.++...
T Consensus 57 ~~DlillD~~MP~mdG~el~~~ir~~~~~~~ipvI~lTa~~ 97 (134)
T 3to5_A 57 DFDFVVTDWNMPGMQGIDLLKNIRADEELKHLPVLMITAEA 97 (134)
T ss_dssp CCSEEEEESCCSSSCHHHHHHHHHHSTTTTTCCEEEEESSC
T ss_pred CCCEEEEcCCCCCCCHHHHHHHHHhCCCCCCCeEEEEECCC
Confidence 899999999877 677777655 48988886543
No 158
>3qjg_A Epidermin biosynthesis protein EPID; structural genomics, center for structural genomics of infec diseases, csgid, oxidoreductase; HET: FMN; 2.04A {Staphylococcus aureus} SCOP: c.34.1.0
Probab=44.84 E-value=53 Score=27.47 Aligned_cols=113 Identities=13% Similarity=0.023 Sum_probs=64.7
Q ss_pred cEEEEEecccccCCHHHHHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCchhHHHhcCCCeEEE---eeccHHHhhccCC
Q 011789 283 SVLYVSFGSYAHVSKRDLIEIANGIAKSKVTFIWILRPDIVSSDDPNPLPEDFKKEVADRSMII---TWCCQTSVLAHPA 359 (477)
Q Consensus 283 ~~I~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~lp~~~~~~~~~nv~v~---~~~p~~~lL~~~~ 359 (477)
.+++.-.|+..... ...+++.|.+.|..+-+++..... .-+.....+.+.+.++.. .|+++.++-..++
T Consensus 7 ~IllgvTGs~aa~k---~~~ll~~L~~~g~~V~vv~T~~A~-----~fi~~~~l~~l~~~v~~~~~~~~~~hi~l~~~aD 78 (175)
T 3qjg_A 7 NVLICLCGSVNSIN---ISHYIIELKSKFDEVNVIASTNGR-----KFINGEILKQFCDNYYDEFEDPFLNHVDIANKHD 78 (175)
T ss_dssp EEEEEECSSGGGGG---HHHHHHHHTTTCSEEEEEECTGGG-----GGSCHHHHHHHCSCEECTTTCTTCCHHHHHHTCS
T ss_pred EEEEEEeCHHHHHH---HHHHHHHHHHCCCEEEEEECcCHH-----HHhhHHHHHHhcCCEEecCCCCccccccccchhC
Confidence 46666666665432 345677777778777666544321 222222222333333221 3566777777677
Q ss_pred CCccccccCCchhhH-------------HHhcCcceeccccccc-------hhhHHHHHHhhhcce
Q 011789 360 IGGFLTHCGWNSVLE-------------GLWCGVPLLCFPLYTD-------QFTNRKLAVDDWNVG 405 (477)
Q Consensus 360 ~~~~ItHgG~gs~~e-------------al~~GvP~v~~P~~~D-------Q~~na~~v~~~~G~G 405 (477)
+ .+|-=|-+||+.. ++..++|++++|-..+ .-.|-.++.+. |+=
T Consensus 79 ~-~vVaPaTanTlakiA~GiaDnLlt~~~la~~~pvvl~Pamn~~m~~~p~~~~Nl~~L~~~-G~~ 142 (175)
T 3qjg_A 79 K-IIILPATSNTINKIANGICDNLLLTICHTAFEKLSIFPNMNLRMWENPVTQNNIRLLKDY-GVS 142 (175)
T ss_dssp E-EEEEEECHHHHHHHHTTCCCSHHHHHHHTCGGGEEEEECEEHHHHTCHHHHHHHHHHHHT-TCE
T ss_pred E-EEEeeCCHHHHHHHHccccCCHHHHHHHHcCCCEEEEecCChhhhcCHHHHHHHHHHHHC-CCE
Confidence 5 5666676665543 4777899999994322 24577777776 763
No 159
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}
Probab=44.76 E-value=12 Score=32.72 Aligned_cols=35 Identities=14% Similarity=0.145 Sum_probs=27.4
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 011789 6 TQKPHAIFISYPLQGHVNPSVQLALKLASQGFTITFVNTH 45 (477)
Q Consensus 6 ~~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 45 (477)
..||||.|+-.|..| ..+|+.|.+.||+|+++...
T Consensus 21 m~mmkI~IIG~G~mG-----~~la~~l~~~g~~V~~v~~r 55 (220)
T 4huj_A 21 QSMTTYAIIGAGAIG-----SALAERFTAAQIPAIIANSR 55 (220)
T ss_dssp GGSCCEEEEECHHHH-----HHHHHHHHHTTCCEEEECTT
T ss_pred hcCCEEEEECCCHHH-----HHHHHHHHhCCCEEEEEECC
Confidence 457899999876666 46788999999999985443
No 160
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=44.34 E-value=14 Score=34.27 Aligned_cols=41 Identities=15% Similarity=0.088 Sum_probs=30.0
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCcchhhh
Q 011789 6 TQKPHAIFISYPLQGHVNPSVQLALKLASQGFTITFVNTHFIHQQM 51 (477)
Q Consensus 6 ~~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~~ 51 (477)
..+|||+++-.|+.| ..+|..|++.||+|+++..+...+.+
T Consensus 17 ~~~~kI~IiGaGa~G-----~~~a~~L~~~G~~V~l~~~~~~~~~i 57 (318)
T 3hwr_A 17 FQGMKVAIMGAGAVG-----CYYGGMLARAGHEVILIARPQHVQAI 57 (318)
T ss_dssp ---CEEEEESCSHHH-----HHHHHHHHHTTCEEEEECCHHHHHHH
T ss_pred ccCCcEEEECcCHHH-----HHHHHHHHHCCCeEEEEEcHhHHHHH
Confidence 367999999888888 45788999999999999443344444
No 161
>2afh_E Nitrogenase iron protein 1; nitrogen fixation, iron-sulfur, metal-binding, molybdenum, oxidoreductase; HET: HCA CFN CLF PGE PG4 P6G 1PE; 2.10A {Azotobacter vinelandii} SCOP: c.37.1.10 PDB: 1g1m_A 1g5p_A 1m1y_E* 1m34_E* 1n2c_E* 1nip_A* 1fp6_A* 2afi_E* 2afk_E* 2nip_A 1de0_A 1xcp_A* 1xdb_A 1xd8_A 1xd9_A* 1g20_E* 1g21_E* 2c8v_A* 1rw4_A
Probab=44.32 E-value=22 Score=32.23 Aligned_cols=40 Identities=15% Similarity=0.098 Sum_probs=32.9
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCc
Q 011789 7 QKPHAIFISYPLQGHVNPSVQLALKLASQGFTITFVNTHF 46 (477)
Q Consensus 7 ~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~ 46 (477)
+|+.|+|..-|+.|=.--.+.||..|+++|++|.++=...
T Consensus 1 ~MkvIavs~KGGvGKTT~a~nLA~~La~~G~rVlliD~D~ 40 (289)
T 2afh_E 1 AMRQCAIYGKGGIGKSTTTQNLVAALAEMGKKVMIVGCDP 40 (289)
T ss_dssp CCEEEEEEECTTSSHHHHHHHHHHHHHHTTCCEEEEEECS
T ss_pred CceEEEEeCCCcCcHHHHHHHHHHHHHHCCCeEEEEecCC
Confidence 3566777667888999999999999999999999875443
No 162
>2lpm_A Two-component response regulator; transcription regulator; NMR {Sinorhizobium meliloti}
Probab=44.07 E-value=18 Score=28.37 Aligned_cols=28 Identities=14% Similarity=0.040 Sum_probs=20.9
Q ss_pred CccEEEecCCCc--chHHHHH---HhCCceEEE
Q 011789 120 NVHCLIADTYFV--WPSKLAK---KFGLYYISF 147 (477)
Q Consensus 120 ~pD~iI~D~~~~--~~~~~A~---~~gIP~v~~ 147 (477)
+||+||.|...+ .+..+++ +.++|+|.+
T Consensus 53 ~~DlvllDi~mP~~~G~el~~~lr~~~ipvI~l 85 (123)
T 2lpm_A 53 QFDIAIIDVNLDGEPSYPVADILAERNVPFIFA 85 (123)
T ss_dssp CSSEEEECSSSSSCCSHHHHHHHHHTCCSSCCB
T ss_pred CCCEEEEecCCCCCCHHHHHHHHHcCCCCEEEE
Confidence 999999998766 4555554 457887765
No 163
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=44.02 E-value=24 Score=31.74 Aligned_cols=34 Identities=21% Similarity=0.342 Sum_probs=25.7
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 011789 7 QKPHAIFISYPLQGHVNPSVQLALKLASQGFTITFVNTH 45 (477)
Q Consensus 7 ~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 45 (477)
+||+|++. |+ |-+- ..|++.|.++||+|+.++-.
T Consensus 2 ~~~~ilVt--Ga-G~iG--~~l~~~L~~~g~~V~~~~r~ 35 (286)
T 3gpi_A 2 SLSKILIA--GC-GDLG--LELARRLTAQGHEVTGLRRS 35 (286)
T ss_dssp CCCCEEEE--CC-SHHH--HHHHHHHHHTTCCEEEEECT
T ss_pred CCCcEEEE--CC-CHHH--HHHHHHHHHCCCEEEEEeCC
Confidence 46788877 34 7444 46789999999999998754
No 164
>1cp2_A CP2, nitrogenase iron protein; oxidoreductase; 1.93A {Clostridium pasteurianum} SCOP: c.37.1.10
Probab=43.85 E-value=22 Score=31.81 Aligned_cols=39 Identities=18% Similarity=0.090 Sum_probs=32.3
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCc
Q 011789 8 KPHAIFISYPLQGHVNPSVQLALKLASQGFTITFVNTHF 46 (477)
Q Consensus 8 ~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~ 46 (477)
|+.|.|..-|+.|=.--.+.||..|+++|++|.++=...
T Consensus 1 M~vI~vs~KGGvGKTT~a~nLA~~la~~G~~VlliD~D~ 39 (269)
T 1cp2_A 1 MRQVAIYGKGGIGKSTTTQNLTSGLHAMGKTIMVVGCDP 39 (269)
T ss_dssp CEEEEEEECTTSSHHHHHHHHHHHHHTTTCCEEEEEECT
T ss_pred CcEEEEecCCCCcHHHHHHHHHHHHHHCCCcEEEEcCCC
Confidence 456777667788999999999999999999999875443
No 165
>1u11_A PURE (N5-carboxyaminoimidazole ribonucleotide MUT; acidophIle, protein stability, lyase; HET: CIT; 1.55A {Acetobacter aceti} SCOP: c.23.8.1 PDB: 2fwj_A* 2fw1_A* 2fwb_A 2fwa_A 2fw9_A 2fw7_A 2fw6_A 2fwp_A* 2fwi_A* 2fw8_A
Probab=43.74 E-value=1.4e+02 Score=24.93 Aligned_cols=140 Identities=9% Similarity=0.140 Sum_probs=79.0
Q ss_pred cEEEEEecccccCCHHHHHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCchhHHHhcCCCeEEEeeccHHHhhc---cCC
Q 011789 283 SVLYVSFGSYAHVSKRDLIEIANGIAKSKVTFIWILRPDIVSSDDPNPLPEDFKKEVADRSMIITWCCQTSVLA---HPA 359 (477)
Q Consensus 283 ~~I~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~lp~~~~~~~~~nv~v~~~~p~~~lL~---~~~ 359 (477)
+.|-|-+||.. +....++....++..|..+-+.+-+. ...|+...+ +.. ...
T Consensus 22 ~~V~IimGS~S--D~~v~~~a~~~L~~~Gi~~dv~V~Sa-------HR~p~~l~~----------------~~~~a~~~g 76 (182)
T 1u11_A 22 PVVGIIMGSQS--DWETMRHADALLTELEIPHETLIVSA-------HRTPDRLAD----------------YARTAAERG 76 (182)
T ss_dssp CSEEEEESSGG--GHHHHHHHHHHHHHTTCCEEEEECCT-------TTCHHHHHH----------------HHHHTTTTT
T ss_pred CEEEEEECcHH--HHHHHHHHHHHHHHcCCCeEEEEEcc-------cCCHHHHHH----------------HHHHHHhCC
Confidence 35666677765 46667888888899998876666544 345553221 111 111
Q ss_pred CCccccccCCchhhHHH---hcCcceeccccccc---hhhHHHHHHh--hhcceeeec-CCC--CcCHHHHHHHHHHHhc
Q 011789 360 IGGFLTHCGWNSVLEGL---WCGVPLLCFPLYTD---QFTNRKLAVD--DWNVGLNLS-NEK--VITKEEVSKNVHLLMG 428 (477)
Q Consensus 360 ~~~~ItHgG~gs~~eal---~~GvP~v~~P~~~D---Q~~na~~v~~--~~G~G~~~~-~~~--~~~~~~l~~~i~~~l~ 428 (477)
++++|.=.|+-.-+-.+ ..-+|+|.+|.... -.+--.-+.+ . |+.+..- .++ -+++.-+...|. -+.
T Consensus 77 ~~ViIa~AG~aa~LpgvvA~~t~~PVIgVP~~~~~l~G~dsLlSivqmP~-GvpVatV~I~~a~~~nAallAaqIl-a~~ 154 (182)
T 1u11_A 77 LNVIIAGAGGAAHLPGMCAAWTRLPVLGVPVESRALKGMDSLLSIVQMPG-GVPVGTLAIGASGAKNAALLAASIL-ALY 154 (182)
T ss_dssp CCEEEEEEESSCCHHHHHHHHCSSCEEEEEECCTTTTTHHHHHHHHCCCT-TSCCEECCSSHHHHHHHHHHHHHHH-GGG
T ss_pred CcEEEEecCchhhhHHHHHhccCCCEEEeeCCCCCCCcHHHHHHHhcCCC-CCceEEEecCCccchHHHHHHHHHH-ccC
Confidence 23477766654333222 34679999997432 2222223455 5 5653210 000 134444444443 357
Q ss_pred CCchHHHHHHHHHHHHHHHHHhcC
Q 011789 429 EKSGAKYRNAAKQVKKAMEYALQP 452 (477)
Q Consensus 429 ~~~~~~~~~~a~~l~~~~~~~~~~ 452 (477)
|+ .++++.+..++++.+...+
T Consensus 155 d~---~l~~kL~~~r~~~~~~v~~ 175 (182)
T 1u11_A 155 NP---ALAARLETWRALQTASVPN 175 (182)
T ss_dssp CH---HHHHHHHHHHHHHHHHSCS
T ss_pred CH---HHHHHHHHHHHHHHHHHHH
Confidence 88 8999999999998876443
No 166
>2zki_A 199AA long hypothetical Trp repressor binding protein; alpha/beta structure, transcription; 2.90A {Sulfolobus tokodaii}
Probab=43.69 E-value=23 Score=30.03 Aligned_cols=39 Identities=13% Similarity=0.214 Sum_probs=28.6
Q ss_pred CCcEEEEEcCCCccCHHHHHH-HHHHHHhCCCeEEEEeCCc
Q 011789 7 QKPHAIFISYPLQGHVNPSVQ-LALKLASQGFTITFVNTHF 46 (477)
Q Consensus 7 ~~~~il~~~~~~~GH~~p~l~-La~~L~~rGh~Vt~~~~~~ 46 (477)
.||||+++... .|+..-+.. +++.|.+.|++|.++....
T Consensus 3 ~mmkilii~~S-~g~T~~la~~i~~~l~~~g~~v~~~~l~~ 42 (199)
T 2zki_A 3 CKPNILVLFYG-YGSIVELAKEIGKGAEEAGAEVKIRRVRE 42 (199)
T ss_dssp CCCEEEEEECC-SSHHHHHHHHHHHHHHHHSCEEEEEECCC
T ss_pred CCcEEEEEEeC-ccHHHHHHHHHHHHHHhCCCEEEEEehhH
Confidence 47899888877 888776655 4566667899998875443
No 167
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=43.33 E-value=21 Score=32.07 Aligned_cols=35 Identities=20% Similarity=0.123 Sum_probs=26.4
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCcc
Q 011789 8 KPHAIFISYPLQGHVNPSVQLALKLASQGFTITFVNTHFI 47 (477)
Q Consensus 8 ~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~ 47 (477)
||||++.- + |.+-. .|++.|.++||+|+.++-...
T Consensus 5 ~~~ilVtG--a-G~iG~--~l~~~L~~~g~~V~~~~r~~~ 39 (286)
T 3ius_A 5 TGTLLSFG--H-GYTAR--VLSRALAPQGWRIIGTSRNPD 39 (286)
T ss_dssp CCEEEEET--C-CHHHH--HHHHHHGGGTCEEEEEESCGG
T ss_pred cCcEEEEC--C-cHHHH--HHHHHHHHCCCEEEEEEcChh
Confidence 46777763 5 76654 578999999999999986553
No 168
>3u7q_B Nitrogenase molybdenum-iron protein beta chain; multiple rossmann fold domains, reductase, nitrogen fixing, oxidoreductase; HET: HCA ICS 1CL CLF; 1.00A {Azotobacter vinelandii} SCOP: c.92.2.3 PDB: 1fp4_B* 1g21_B* 1g20_B* 1m1n_B* 1l5h_B* 1m1y_B* 1m34_B* 1n2c_B* 2afh_B* 2afi_B* 2afk_B* 2min_B* 3k1a_B* 3min_B*
Probab=43.09 E-value=1.5e+02 Score=29.63 Aligned_cols=34 Identities=15% Similarity=0.049 Sum_probs=23.4
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCc
Q 011789 8 KPHAIFISYPLQGHVNPSVQLALKLASQGFTITFVNTHF 46 (477)
Q Consensus 8 ~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~ 46 (477)
.+|++++ |+-.-.+.|++.|.+-|-+|..+.+..
T Consensus 364 GKrvaI~-----gd~~~~~~la~fL~elGm~vv~v~~~~ 397 (523)
T 3u7q_B 364 GKRFALW-----GDPDFVMGLVKFLLELGCEPVHILCHN 397 (523)
T ss_dssp TCEEEEE-----CSHHHHHHHHHHHHHTTCEEEEEEETT
T ss_pred CCEEEEE-----CCchHHHHHHHHHHHcCCEEEEEEeCC
Confidence 3677776 233445677888888898888876543
No 169
>2bln_A Protein YFBG; transferase, formyltransferase, L-ARA4N biosynthesis, methyltransferase; HET: FON U5P; 1.2A {Escherichia coli} SCOP: b.46.1.1 c.65.1.1 PDB: 1yrw_A
Probab=42.92 E-value=1e+02 Score=28.39 Aligned_cols=33 Identities=18% Similarity=0.214 Sum_probs=23.1
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCc
Q 011789 9 PHAIFISYPLQGHVNPSVQLALKLASQGFTITFVNTHF 46 (477)
Q Consensus 9 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~ 46 (477)
|||+|+..+.. .....++|.++||+|..+.+..
T Consensus 1 mrivf~gt~~f-----a~~~L~~L~~~~~~i~~Vvt~~ 33 (305)
T 2bln_A 1 MKTVVFAYHDM-----GCLGIEALLAAGYEISAIFTHT 33 (305)
T ss_dssp CEEEEEECHHH-----HHHHHHHHHHTTCEEEEEECCC
T ss_pred CEEEEEEcCHH-----HHHHHHHHHHCCCcEEEEEcCC
Confidence 68888865432 2455677888899998776643
No 170
>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A*
Probab=42.77 E-value=1.4e+02 Score=26.29 Aligned_cols=36 Identities=14% Similarity=0.240 Sum_probs=27.6
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCc
Q 011789 8 KPHAIFISYPLQGHVNPSVQLALKLASQGFTITFVNTHF 46 (477)
Q Consensus 8 ~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~ 46 (477)
|-|.++++.++.| ==.++|+.|++.|++|.+.....
T Consensus 1 MnK~vlVTGas~G---IG~aia~~la~~Ga~V~~~~~~~ 36 (247)
T 3ged_A 1 MNRGVIVTGGGHG---IGKQICLDFLEAGDKVCFIDIDE 36 (247)
T ss_dssp -CCEEEEESTTSH---HHHHHHHHHHHTTCEEEEEESCH
T ss_pred CCCEEEEecCCCH---HHHHHHHHHHHCCCEEEEEeCCH
Confidence 4477888888876 33578999999999998876543
No 171
>2a33_A Hypothetical protein; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG, AT2G37210; 1.95A {Arabidopsis thaliana} SCOP: c.129.1.1 PDB: 2q4o_A
Probab=42.56 E-value=39 Score=29.42 Aligned_cols=47 Identities=15% Similarity=0.162 Sum_probs=32.7
Q ss_pred CCCCCcEEEEEcCCCccC----HHHHHHHHHHHHhCCCeEEEEeCC-cchhh
Q 011789 4 NKTQKPHAIFISYPLQGH----VNPSVQLALKLASQGFTITFVNTH-FIHQQ 50 (477)
Q Consensus 4 ~~~~~~~il~~~~~~~GH----~~p~l~La~~L~~rGh~Vt~~~~~-~~~~~ 50 (477)
....|.+|.+++....+- ..-...|++.|+++|+.|+.-..+ .....
T Consensus 9 ~~~~m~~IaV~cGS~~~~~~~y~~~A~~lg~~LA~~G~~vVsGGg~~GiM~a 60 (215)
T 2a33_A 9 QKSKFRRICVFCGSSQGKKSSYQDAAVDLGNELVSRNIDLVYGGGSIGLMGL 60 (215)
T ss_dssp CCCSCSEEEEECCSSCCSSHHHHHHHHHHHHHHHHTTCEEEECCCSSHHHHH
T ss_pred ccCCCCeEEEEECCCCCCchHHHHHHHHHHHHHHHCCCEEEECCChhhHhHH
Confidence 345667899997766653 234678899999999999876665 44433
No 172
>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}
Probab=42.53 E-value=19 Score=32.69 Aligned_cols=34 Identities=24% Similarity=0.328 Sum_probs=27.7
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCc
Q 011789 8 KPHAIFISYPLQGHVNPSVQLALKLASQGFTITFVNTHF 46 (477)
Q Consensus 8 ~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~ 46 (477)
||||.|+-.|..|. .+|+.|+++||+|+++....
T Consensus 1 M~~I~iiG~G~mG~-----~~a~~l~~~G~~V~~~dr~~ 34 (287)
T 3pdu_A 1 MTTYGFLGLGIMGG-----PMAANLVRAGFDVTVWNRNP 34 (287)
T ss_dssp CCCEEEECCSTTHH-----HHHHHHHHHTCCEEEECSSG
T ss_pred CCeEEEEccCHHHH-----HHHHHHHHCCCeEEEEcCCH
Confidence 68999998887774 57889999999999886543
No 173
>3q9l_A Septum site-determining protein MIND; ATPase, bacterial cell division inhibitor, MINC, MINE, cell hydrolase; HET: ATP; 2.34A {Escherichia coli} PDB: 3r9i_A* 3r9j_A*
Probab=42.30 E-value=25 Score=31.11 Aligned_cols=39 Identities=18% Similarity=0.218 Sum_probs=31.0
Q ss_pred CcEEEEEcC--CCccCHHHHHHHHHHHHhCCCeEEEEeCCc
Q 011789 8 KPHAIFISY--PLQGHVNPSVQLALKLASQGFTITFVNTHF 46 (477)
Q Consensus 8 ~~~il~~~~--~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~ 46 (477)
|+|++.+.. |+.|=..-.+.||..|+++|++|.++=...
T Consensus 1 M~~vi~v~s~kgGvGKTt~a~~LA~~la~~g~~VlliD~D~ 41 (260)
T 3q9l_A 1 MARIIVVTSGKGGVGKTTSSAAIATGLAQKGKKTVVIDFAI 41 (260)
T ss_dssp -CEEEEEECSSTTSSHHHHHHHHHHHHHHTTCCEEEEECCC
T ss_pred CCeEEEEECCCCCCcHHHHHHHHHHHHHhCCCcEEEEECCC
Confidence 566666644 577888889999999999999999986554
No 174
>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}
Probab=42.17 E-value=15 Score=34.13 Aligned_cols=35 Identities=14% Similarity=0.163 Sum_probs=27.1
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHhCCC-eEEEEeCC
Q 011789 6 TQKPHAIFISYPLQGHVNPSVQLALKLASQGF-TITFVNTH 45 (477)
Q Consensus 6 ~~~~~il~~~~~~~GH~~p~l~La~~L~~rGh-~Vt~~~~~ 45 (477)
..||||.|+-.|..| ..+|+.|++.|| +|+++...
T Consensus 22 ~~~~~I~iIG~G~mG-----~~~A~~L~~~G~~~V~~~dr~ 57 (312)
T 3qsg_A 22 SNAMKLGFIGFGEAA-----SAIASGLRQAGAIDMAAYDAA 57 (312)
T ss_dssp ---CEEEEECCSHHH-----HHHHHHHHHHSCCEEEEECSS
T ss_pred CCCCEEEEECccHHH-----HHHHHHHHHCCCCeEEEEcCC
Confidence 457899999887777 478999999999 99988664
No 175
>2xj4_A MIPZ; replication, cell division, ATPase, WACA; 1.60A {Caulobacter vibrioides} PDB: 2xj9_A* 2xit_A
Probab=41.81 E-value=26 Score=31.77 Aligned_cols=39 Identities=15% Similarity=0.247 Sum_probs=31.5
Q ss_pred CcEEEEEcC--CCccCHHHHHHHHHHHHhCCCeEEEEeCCc
Q 011789 8 KPHAIFISY--PLQGHVNPSVQLALKLASQGFTITFVNTHF 46 (477)
Q Consensus 8 ~~~il~~~~--~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~ 46 (477)
|+|++.+.. |+.|=..-.+.||..|+++|++|.++=...
T Consensus 3 M~kvI~v~s~KGGvGKTT~a~nLA~~La~~G~~VlliD~D~ 43 (286)
T 2xj4_A 3 ETRVIVVGNEKGGAGKSTIAVHLVTALLYGGAKVAVIDLDL 43 (286)
T ss_dssp -CEEEEECCSSSCTTHHHHHHHHHHHHHHTTCCEEEEECCT
T ss_pred CCeEEEEEcCCCCCCHHHHHHHHHHHHHHCCCcEEEEECCC
Confidence 676666654 688888999999999999999999986555
No 176
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=41.73 E-value=16 Score=33.57 Aligned_cols=35 Identities=11% Similarity=0.005 Sum_probs=27.3
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 011789 6 TQKPHAIFISYPLQGHVNPSVQLALKLASQGFTITFVNTH 45 (477)
Q Consensus 6 ~~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 45 (477)
..+|||.|+-.|..|. .+|+.|+++||+|+++...
T Consensus 5 ~~~~~I~iIG~G~mG~-----~~a~~l~~~G~~V~~~dr~ 39 (303)
T 3g0o_A 5 GTDFHVGIVGLGSMGM-----GAARSCLRAGLSTWGADLN 39 (303)
T ss_dssp --CCEEEEECCSHHHH-----HHHHHHHHTTCEEEEECSC
T ss_pred CCCCeEEEECCCHHHH-----HHHHHHHHCCCeEEEEECC
Confidence 4568999997777764 6789999999999988544
No 177
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=41.45 E-value=23 Score=30.53 Aligned_cols=34 Identities=12% Similarity=0.156 Sum_probs=25.8
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 011789 6 TQKPHAIFISYPLQGHVNPSVQLALKLASQGFTITFVNT 44 (477)
Q Consensus 6 ~~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 44 (477)
-.+|+|.|+-.|..| ..+|+.|.++||+|+++..
T Consensus 17 ~~~~~I~iiG~G~mG-----~~la~~l~~~g~~V~~~~~ 50 (209)
T 2raf_A 17 FQGMEITIFGKGNMG-----QAIGHNFEIAGHEVTYYGS 50 (209)
T ss_dssp ---CEEEEECCSHHH-----HHHHHHHHHTTCEEEEECT
T ss_pred cCCCEEEEECCCHHH-----HHHHHHHHHCCCEEEEEcC
Confidence 467899999877666 5678999999999998754
No 178
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=41.34 E-value=22 Score=33.05 Aligned_cols=39 Identities=18% Similarity=0.197 Sum_probs=31.5
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCcchhhh-cc
Q 011789 9 PHAIFISYPLQGHVNPSVQLALKLASQGFTITFVNTHFIHQQM-TK 53 (477)
Q Consensus 9 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~~-~~ 53 (477)
|||+++-.|+.|- .+|..|++.||+|+++..... +.+ ..
T Consensus 3 mkI~IiGaGaiG~-----~~a~~L~~~g~~V~~~~r~~~-~~i~~~ 42 (320)
T 3i83_A 3 LNILVIGTGAIGS-----FYGALLAKTGHCVSVVSRSDY-ETVKAK 42 (320)
T ss_dssp CEEEEESCCHHHH-----HHHHHHHHTTCEEEEECSTTH-HHHHHH
T ss_pred CEEEEECcCHHHH-----HHHHHHHhCCCeEEEEeCChH-HHHHhC
Confidence 7999998888884 578899999999999987763 555 44
No 179
>1g3q_A MIND ATPase, cell division inhibitor; alpha-beta-alpha layered, protein-ADP complex, cell cycle, hydrolase; HET: ADP; 2.00A {Pyrococcus furiosus} SCOP: c.37.1.10 PDB: 1g3r_A* 1ion_A*
Probab=41.24 E-value=28 Score=30.22 Aligned_cols=39 Identities=18% Similarity=0.209 Sum_probs=30.8
Q ss_pred CcEEEEEcC--CCccCHHHHHHHHHHHHhCCCeEEEEeCCc
Q 011789 8 KPHAIFISY--PLQGHVNPSVQLALKLASQGFTITFVNTHF 46 (477)
Q Consensus 8 ~~~il~~~~--~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~ 46 (477)
|+|++.+.. |+.|=..-.+.||..|+++|++|.++-...
T Consensus 1 M~~~i~v~s~kgGvGKTt~a~~LA~~la~~g~~VlliD~D~ 41 (237)
T 1g3q_A 1 MGRIISIVSGKGGTGKTTVTANLSVALGDRGRKVLAVDGDL 41 (237)
T ss_dssp CCEEEEEECSSTTSSHHHHHHHHHHHHHHTTCCEEEEECCT
T ss_pred CceEEEEecCCCCCCHHHHHHHHHHHHHhcCCeEEEEeCCC
Confidence 455555543 577888889999999999999999986654
No 180
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=41.15 E-value=28 Score=29.67 Aligned_cols=34 Identities=12% Similarity=0.133 Sum_probs=24.7
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCc
Q 011789 9 PHAIFISYPLQGHVNPSVQLALKLASQGFTITFVNTHF 46 (477)
Q Consensus 9 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~ 46 (477)
|||+++ |+.|.+- ..|+++|.++||+|+.++-..
T Consensus 1 MkvlVt--GatG~iG--~~l~~~L~~~g~~V~~~~R~~ 34 (221)
T 3ew7_A 1 MKIGII--GATGRAG--SRILEEAKNRGHEVTAIVRNA 34 (221)
T ss_dssp CEEEEE--TTTSHHH--HHHHHHHHHTTCEEEEEESCS
T ss_pred CeEEEE--cCCchhH--HHHHHHHHhCCCEEEEEEcCc
Confidence 576554 4445443 478899999999999987654
No 181
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=41.09 E-value=19 Score=34.29 Aligned_cols=30 Identities=27% Similarity=0.324 Sum_probs=25.7
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEe
Q 011789 9 PHAIFISYPLQGHVNPSVQLALKLASQGFTITFVN 43 (477)
Q Consensus 9 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~ 43 (477)
|||+++--|--| +.+|..|+++||+|+++-
T Consensus 2 m~V~IVGaGpaG-----l~~A~~L~~~G~~v~v~E 31 (412)
T 4hb9_A 2 MHVGIIGAGIGG-----TCLAHGLRKHGIKVTIYE 31 (412)
T ss_dssp CEEEEECCSHHH-----HHHHHHHHHTTCEEEEEC
T ss_pred CEEEEECcCHHH-----HHHHHHHHhCCCCEEEEe
Confidence 799999777555 788999999999999984
No 182
>3nva_A CTP synthase; rossman fold, nucleotide binding, LIG; 2.50A {Sulfolobus solfataricus}
Probab=40.89 E-value=27 Score=34.84 Aligned_cols=42 Identities=14% Similarity=0.162 Sum_probs=34.9
Q ss_pred CcEEEEEcCC---CccCHHHHHHHHHHHHhCCCeEEEEeCCcchh
Q 011789 8 KPHAIFISYP---LQGHVNPSVQLALKLASQGFTITFVNTHFIHQ 49 (477)
Q Consensus 8 ~~~il~~~~~---~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~ 49 (477)
|||.+|++.| +.|-=.-...|++.|++||++||..=.+++-.
T Consensus 2 ~~k~i~vtggv~s~lgkgi~~as~g~ll~~~g~~v~~~k~dpyln 46 (535)
T 3nva_A 2 PNKYIVVTGGVLSSVGKGTLVASIGMLLKRRGYNVTAVKIDPYIN 46 (535)
T ss_dssp CCEEEEEECCCSTTTTHHHHHHHHHHHHHHTTCCEEEEEEECSSS
T ss_pred CceEEEEeCccccCcchHHHHHHHHHHHHHCCceEEEEecCccee
Confidence 4799999987 55667788999999999999999987666543
No 183
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=40.84 E-value=34 Score=27.58 Aligned_cols=35 Identities=14% Similarity=0.175 Sum_probs=26.4
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCc
Q 011789 7 QKPHAIFISYPLQGHVNPSVQLALKLASQGFTITFVNTHF 46 (477)
Q Consensus 7 ~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~ 46 (477)
..++|+++-.|..| ..+++.|.++|++|+++....
T Consensus 18 ~~~~v~IiG~G~iG-----~~la~~L~~~g~~V~vid~~~ 52 (155)
T 2g1u_A 18 KSKYIVIFGCGRLG-----SLIANLASSSGHSVVVVDKNE 52 (155)
T ss_dssp CCCEEEEECCSHHH-----HHHHHHHHHTTCEEEEEESCG
T ss_pred CCCcEEEECCCHHH-----HHHHHHHHhCCCeEEEEECCH
Confidence 34789988654444 557899999999999987644
No 184
>3gl9_A Response regulator; beta-sheet, surrounded by alpha helices, BOTH sides, signaling protein; HET: BFD; 1.80A {Thermotoga maritima} SCOP: c.23.1.0 PDB: 3dgf_C 3dge_C
Probab=40.54 E-value=47 Score=25.04 Aligned_cols=32 Identities=9% Similarity=0.030 Sum_probs=23.4
Q ss_pred CccEEEecCCCc--chHHHHHHh-------CCceEEEecch
Q 011789 120 NVHCLIADTYFV--WPSKLAKKF-------GLYYISFWTES 151 (477)
Q Consensus 120 ~pD~iI~D~~~~--~~~~~A~~~-------gIP~v~~~~~~ 151 (477)
+||+||.|...+ .+..+.+.+ ++|++.++...
T Consensus 46 ~~dlvllD~~~p~~~g~~~~~~l~~~~~~~~~pii~~s~~~ 86 (122)
T 3gl9_A 46 TPDLIVLXIMMPVMDGFTVLKKLQEKEEWKRIPVIVLTAKG 86 (122)
T ss_dssp CCSEEEECSCCSSSCHHHHHHHHHTSTTTTTSCEEEEESCC
T ss_pred CCCEEEEeccCCCCcHHHHHHHHHhcccccCCCEEEEecCC
Confidence 899999998655 466666654 58888886543
No 185
>1yb4_A Tartronic semialdehyde reductase; structural genomics, oxidoreductase, salmonella typhimurium LT2, PSI, protein ST initiative; 2.40A {Salmonella typhimurium}
Probab=40.35 E-value=16 Score=33.22 Aligned_cols=32 Identities=22% Similarity=0.366 Sum_probs=24.8
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEe
Q 011789 7 QKPHAIFISYPLQGHVNPSVQLALKLASQGFTITFVN 43 (477)
Q Consensus 7 ~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~ 43 (477)
.||||.|+-.|..|. .+++.|.+.||+|+++.
T Consensus 2 ~~m~i~iiG~G~~G~-----~~a~~l~~~g~~V~~~~ 33 (295)
T 1yb4_A 2 NAMKLGFIGLGIMGS-----PMAINLARAGHQLHVTT 33 (295)
T ss_dssp --CEEEECCCSTTHH-----HHHHHHHHTTCEEEECC
T ss_pred CCCEEEEEccCHHHH-----HHHHHHHhCCCEEEEEc
Confidence 468999998777775 46888999999998765
No 186
>1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2
Probab=39.96 E-value=1.8e+02 Score=25.66 Aligned_cols=35 Identities=6% Similarity=0.174 Sum_probs=24.7
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCc
Q 011789 9 PHAIFISYPLQGHVNPSVQLALKLASQGFTITFVNTHF 46 (477)
Q Consensus 9 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~ 46 (477)
.|.++++.++.| + -..+++.|+++|++|.++....
T Consensus 9 ~k~vlVTGas~g-I--G~~ia~~l~~~G~~V~~~~r~~ 43 (270)
T 1yde_A 9 GKVVVVTGGGRG-I--GAGIVRAFVNSGARVVICDKDE 43 (270)
T ss_dssp TCEEEEETCSSH-H--HHHHHHHHHHTTCEEEEEESCH
T ss_pred CCEEEEECCCcH-H--HHHHHHHHHHCCCEEEEEeCCH
Confidence 356667765543 2 3578999999999999886543
No 187
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=39.93 E-value=24 Score=31.91 Aligned_cols=33 Identities=12% Similarity=-0.020 Sum_probs=26.6
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCc
Q 011789 9 PHAIFISYPLQGHVNPSVQLALKLASQGFTITFVNTHF 46 (477)
Q Consensus 9 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~ 46 (477)
|||+|+-.|..|. .+|..|.++||+|+++....
T Consensus 1 m~i~iiG~G~~G~-----~~a~~l~~~g~~V~~~~r~~ 33 (291)
T 1ks9_A 1 MKITVLGCGALGQ-----LWLTALCKQGHEVQGWLRVP 33 (291)
T ss_dssp CEEEEECCSHHHH-----HHHHHHHHTTCEEEEECSSC
T ss_pred CeEEEECcCHHHH-----HHHHHHHhCCCCEEEEEcCc
Confidence 6899988777773 67899999999999986543
No 188
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=39.85 E-value=22 Score=33.41 Aligned_cols=33 Identities=18% Similarity=0.180 Sum_probs=26.6
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 011789 8 KPHAIFISYPLQGHVNPSVQLALKLASQGFTITFVNTH 45 (477)
Q Consensus 8 ~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 45 (477)
+|||+++-.|..|. .+|..|.++||+|+++...
T Consensus 4 ~mki~iiG~G~~G~-----~~a~~L~~~g~~V~~~~r~ 36 (359)
T 1bg6_A 4 SKTYAVLGLGNGGH-----AFAAYLALKGQSVLAWDID 36 (359)
T ss_dssp CCEEEEECCSHHHH-----HHHHHHHHTTCEEEEECSC
T ss_pred cCeEEEECCCHHHH-----HHHHHHHhCCCEEEEEeCC
Confidence 58999998777664 4688899999999988653
No 189
>3b6i_A Flavoprotein WRBA; flavoproteins, NADH:quinone oxidoreductase, FMN; HET: FMN 15P; 1.66A {Escherichia coli} PDB: 2r96_A* 2r97_A 2rg1_A* 3b6j_A* 3b6k_A* 3b6m_A*
Probab=39.47 E-value=34 Score=28.78 Aligned_cols=38 Identities=13% Similarity=0.315 Sum_probs=27.2
Q ss_pred CcEEEEEcCCCccCHHHHHH-HHHHHHh-CCCeEEEEeCC
Q 011789 8 KPHAIFISYPLQGHVNPSVQ-LALKLAS-QGFTITFVNTH 45 (477)
Q Consensus 8 ~~~il~~~~~~~GH~~p~l~-La~~L~~-rGh~Vt~~~~~ 45 (477)
||||+++-....|+..-+.. +++.|.+ .|++|.++.-.
T Consensus 1 Mmkilii~~S~~g~t~~la~~i~~~l~~~~g~~v~~~~l~ 40 (198)
T 3b6i_A 1 MAKVLVLYYSMYGHIETMARAVAEGASKVDGAEVVVKRVP 40 (198)
T ss_dssp -CEEEEEECCSSSHHHHHHHHHHHHHHTSTTCEEEEEECC
T ss_pred CCeEEEEEeCCCcHHHHHHHHHHHHHhhcCCCEEEEEEcc
Confidence 68888887777888777665 4666666 79998887543
No 190
>2hy5_B Intracellular sulfur oxidation protein DSRF; DSRE, DSRF, sulfur, structural genomics, PSI, protein initiative, berkeley structural genomics center, BSGC, TRAN; 1.72A {Allochromatium vinosum} SCOP: c.114.1.1 PDB: 2hyb_B
Probab=39.11 E-value=42 Score=26.76 Aligned_cols=46 Identities=9% Similarity=0.023 Sum_probs=31.6
Q ss_pred CCCcEEEEE-cCCCccCHHH--HHHHHHHHHhCCCeEEEEeCCcchhhh
Q 011789 6 TQKPHAIFI-SYPLQGHVNP--SVQLALKLASQGFTITFVNTHFIHQQM 51 (477)
Q Consensus 6 ~~~~~il~~-~~~~~GH~~p--~l~La~~L~~rGh~Vt~~~~~~~~~~~ 51 (477)
..|+|++|+ ..+-+|+... .+.+|..+.+.||+|.++-........
T Consensus 3 ~~Mkk~~ivv~~~P~g~~~~~~al~~a~a~~a~~~~v~Vff~~DGV~~~ 51 (136)
T 2hy5_B 3 EVVKKFMYLNRKAPYGTIYAWEALEVVLIGAAFDQDVCVLFLDDGVYQL 51 (136)
T ss_dssp --CCEEEEEECSCTTTSSHHHHHHHHHHHHGGGCCEEEEEECGGGGGGG
T ss_pred cchhEEEEEEeCCCCCcHHHHHHHHHHHHHHhCCCCEEEEEEhHHHHHH
Confidence 345556554 4456676555 477799999999999998877766555
No 191
>2q5c_A NTRC family transcriptional regulator; structural genomics, protein structure initiative; HET: SO4 GOL; 1.49A {Clostridium acetobutylicum atcc 824}
Probab=39.05 E-value=32 Score=29.38 Aligned_cols=45 Identities=16% Similarity=0.189 Sum_probs=35.5
Q ss_pred HHHHHHHHHHhHhcCCCccEEEecCCCcchHHHHHHhCCceEEEecchhH
Q 011789 104 SAHAEEVIGQIVRSGENVHCLIADTYFVWPSKLAKKFGLYYISFWTESAL 153 (477)
Q Consensus 104 ~~~~~~ll~~~~~~~~~pD~iI~D~~~~~~~~~A~~~gIP~v~~~~~~~~ 153 (477)
..+.+..++++.++ ++|+||.|. .+..+|+++|+|.+.+.++...
T Consensus 128 ~~e~~~~i~~l~~~--G~~vvVG~~---~~~~~A~~~Gl~~vli~sg~eS 172 (196)
T 2q5c_A 128 EDEITTLISKVKTE--NIKIVVSGK---TVTDEAIKQGLYGETINSGEES 172 (196)
T ss_dssp GGGHHHHHHHHHHT--TCCEEEECH---HHHHHHHHTTCEEEECCCCHHH
T ss_pred HHHHHHHHHHHHHC--CCeEEECCH---HHHHHHHHcCCcEEEEecCHHH
Confidence 34566777888775 999999985 3688999999999999775443
No 192
>2ixd_A LMBE-related protein; hexamer, deacetylase, rossman fold, zinc-dependent metalloenzyme, hydrolase; 1.8A {Bacillus cereus}
Probab=39.02 E-value=1.1e+02 Score=26.86 Aligned_cols=33 Identities=12% Similarity=0.029 Sum_probs=19.6
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEe
Q 011789 10 HAIFISYPLQGHVNPSVQLALKLASQGFTITFVN 43 (477)
Q Consensus 10 ~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~ 43 (477)
-+++.++|--= ..-+-.....|+++|++|++++
T Consensus 6 vL~v~aHPDDe-~l~~Ggtia~~~~~G~~V~vv~ 38 (242)
T 2ixd_A 6 ILAFGAHADDV-EIGMAGTIAKYTKQGYEVGICD 38 (242)
T ss_dssp EEEEESSTTHH-HHHHHHHHHHHHHTTCCEEEEE
T ss_pred EEEEEeCCChH-HHhHHHHHHHHHHCCCeEEEEE
Confidence 34566666432 2223344456677899988874
No 193
>3zq6_A Putative arsenical pump-driving ATPase; tail-anchored, membrane protein; HET: ADP; 2.11A {Methanothermobacter thermautotrophicusorganism_taxid}
Probab=38.84 E-value=28 Score=32.38 Aligned_cols=41 Identities=24% Similarity=0.169 Sum_probs=34.3
Q ss_pred CCcEEEEEcC-CCccCHHHHHHHHHHHHhCCCeEEEEeCCcc
Q 011789 7 QKPHAIFISY-PLQGHVNPSVQLALKLASQGFTITFVNTHFI 47 (477)
Q Consensus 7 ~~~~il~~~~-~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~ 47 (477)
.|++|+|++. |+.|=..-...||..|+++|++|.++.....
T Consensus 12 gm~~i~v~sgKGGvGKTTvA~~LA~~lA~~G~rVLlvD~D~~ 53 (324)
T 3zq6_A 12 GKTTFVFIGGKGGVGKTTISAATALWMARSGKKTLVISTDPA 53 (324)
T ss_dssp TBCEEEEEEESTTSSHHHHHHHHHHHHHHTTCCEEEEECCSS
T ss_pred CCeEEEEEeCCCCchHHHHHHHHHHHHHHCCCcEEEEeCCCC
Confidence 4466666655 7889999999999999999999999998873
No 194
>2iz6_A Molybdenum cofactor carrier protein; metal transport; 1.60A {Chlamydomonas reinhardtii} PDB: 2iz5_A 2iz7_A
Probab=38.80 E-value=27 Score=29.31 Aligned_cols=134 Identities=14% Similarity=0.073 Sum_probs=66.9
Q ss_pred cccchhhccCCCCcEEEEEecc-cccCCHHHHHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCchhHHHhcCCCeEEEee
Q 011789 270 SDCSQWLDKQPKGSVLYVSFGS-YAHVSKRDLIEIANGIAKSKVTFIWILRPDIVSSDDPNPLPEDFKKEVADRSMIITW 348 (477)
Q Consensus 270 ~~l~~~l~~~~~~~~I~vs~Gs-~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~lp~~~~~~~~~nv~v~~~ 348 (477)
.++.++|.+. +..+||-|. ..- -....++....+.++|-+++... ..++..+ + ....+...
T Consensus 35 ~~lg~~La~~---g~~lVsGGg~~Gi-----m~aa~~gAl~~gG~tigVlP~~~------~~~~~~~---~-~~~i~~~~ 96 (176)
T 2iz6_A 35 NELGKQIATH---GWILLTGGRSLGV-----MHEAMKGAKEAGGTTIGVLPGPD------TSEISDA---V-DIPIVTGL 96 (176)
T ss_dssp HHHHHHHHHT---TCEEEEECSSSSH-----HHHHHHHHHHTTCCEEEEECC-----------CCTT---C-SEEEECCC
T ss_pred HHHHHHHHHC---CCEEEECCCccCH-----hHHHHHHHHHcCCEEEEEeCchh------hhhhccC---C-ceeEEcCC
Confidence 5566666664 356666665 331 12333444445556665554220 1111100 0 12334455
Q ss_pred ccHHH-hhccCCCCccccccCCchhhHH---HhcCcceeccccccchhhHHHHHHhhhcceeeecCCCCcCHHHHHHHHH
Q 011789 349 CCQTS-VLAHPAIGGFLTHCGWNSVLEG---LWCGVPLLCFPLYTDQFTNRKLAVDDWNVGLNLSNEKVITKEEVSKNVH 424 (477)
Q Consensus 349 ~p~~~-lL~~~~~~~~ItHgG~gs~~ea---l~~GvP~v~~P~~~DQ~~na~~v~~~~G~G~~~~~~~~~~~~~l~~~i~ 424 (477)
.+... ++..-+-..++--||.||+.|+ +.+++|++.+|.+. .....+... -..... -.-+++++.+.+.
T Consensus 97 ~~~Rk~~m~~~sda~IvlpGg~GTL~E~~~al~~~kpV~~l~~~~---~~~gfi~~~-~~~~i~---~~~~~~e~~~~l~ 169 (176)
T 2iz6_A 97 GSARDNINALSSNVLVAVGMGPGTAAEVALALKAKKPVVLLGTQP---EAEKFFTSL-DAGLVH---VAADVAGAIAAVK 169 (176)
T ss_dssp CSSSCCCCGGGCSEEEEESCCHHHHHHHHHHHHTTCCEEEESCCH---HHHHHHHHH-CTTTEE---EESSHHHHHHHHH
T ss_pred HHHHHHHHHHhCCEEEEecCCccHHHHHHHHHHhCCcEEEEcCcc---cccccCChh-hcCeEE---EcCCHHHHHHHHH
Confidence 55443 4433333467777999986655 77999999999832 111122222 222111 0347787877777
Q ss_pred HHhc
Q 011789 425 LLMG 428 (477)
Q Consensus 425 ~~l~ 428 (477)
+.+.
T Consensus 170 ~~~~ 173 (176)
T 2iz6_A 170 QLLA 173 (176)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 6553
No 195
>2ark_A Flavodoxin; FMN, structural genomics, PSI, structure initiative, midwest center for structural genomic electron transport; 2.40A {Aquifex aeolicus} SCOP: c.23.5.8
Probab=38.14 E-value=36 Score=28.59 Aligned_cols=41 Identities=12% Similarity=0.117 Sum_probs=30.6
Q ss_pred CCCcEEEEEcCCCccCHHHHHH-HHHHHHh-CCCeEEEEeCCc
Q 011789 6 TQKPHAIFISYPLQGHVNPSVQ-LALKLAS-QGFTITFVNTHF 46 (477)
Q Consensus 6 ~~~~~il~~~~~~~GH~~p~l~-La~~L~~-rGh~Vt~~~~~~ 46 (477)
..||||+++-....|+..-+.. +++.|.+ .|++|.++....
T Consensus 2 ~~M~kiliiy~S~~GnT~~~a~~i~~~l~~~~g~~v~~~~l~~ 44 (188)
T 2ark_A 2 NAMGKVLVIYDTRTGNTKKMAELVAEGARSLEGTEVRLKHVDE 44 (188)
T ss_dssp CCCEEEEEEECCSSSHHHHHHHHHHHHHHTSTTEEEEEEETTT
T ss_pred CCCCEEEEEEECCCcHHHHHHHHHHHHHhhcCCCeEEEEEhhh
Confidence 3478998887777888777665 5667777 899998876544
No 196
>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*
Probab=37.97 E-value=23 Score=30.62 Aligned_cols=35 Identities=17% Similarity=0.273 Sum_probs=24.6
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 011789 6 TQKPHAIFISYPLQGHVNPSVQLALKLASQGFTITFVNTH 45 (477)
Q Consensus 6 ~~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 45 (477)
..+|||+|+-.|..|. .+++.|.+.||+|+++...
T Consensus 26 ~~~~~I~iiG~G~~G~-----~la~~l~~~g~~V~~~~r~ 60 (215)
T 2vns_A 26 DEAPKVGILGSGDFAR-----SLATRLVGSGFKVVVGSRN 60 (215)
T ss_dssp ---CCEEEECCSHHHH-----HHHHHHHHTTCCEEEEESS
T ss_pred CCCCEEEEEccCHHHH-----HHHHHHHHCCCEEEEEeCC
Confidence 3678999996555543 5688899999999887654
No 197
>3kcq_A Phosphoribosylglycinamide formyltransferase; structural genomics, niaid, seattle structural center for infectious disease, ssgcid; 2.20A {Anaplasma phagocytophilum} SCOP: c.65.1.0
Probab=37.66 E-value=1.6e+02 Score=25.49 Aligned_cols=102 Identities=12% Similarity=0.110 Sum_probs=54.9
Q ss_pred CCCCCCcEEEEEcCCCccCHHHHHHHHHHHHhC--CCeEEEEeCCc-ch---hhh-ccCCCCCCccccccccCCCCCeEE
Q 011789 3 GNKTQKPHAIFISYPLQGHVNPSVQLALKLASQ--GFTITFVNTHF-IH---QQM-TKASPEMGSDIFAGVRKSGLDIRY 75 (477)
Q Consensus 3 ~~~~~~~~il~~~~~~~GH~~p~l~La~~L~~r--Gh~Vt~~~~~~-~~---~~~-~~g~~~~~~~~~~~~~~~~~~~~~ 75 (477)
++...|+||+++-+|..+- +.+|.+++.+. +++|..+.+.. .. +.. .. ++.+
T Consensus 3 ~~~~~~~ri~vl~SG~gsn---l~all~~~~~~~~~~~I~~Vis~~~~a~~l~~A~~~------------------gIp~ 61 (215)
T 3kcq_A 3 GSMKKELRVGVLISGRGSN---LEALAKAFSTEESSVVISCVISNNAEARGLLIAQSY------------------GIPT 61 (215)
T ss_dssp ----CCEEEEEEESSCCHH---HHHHHHHTCCC-CSEEEEEEEESCTTCTHHHHHHHT------------------TCCE
T ss_pred CCCCCCCEEEEEEECCcHH---HHHHHHHHHcCCCCcEEEEEEeCCcchHHHHHHHHc------------------CCCE
Confidence 4556788998888776443 44555566554 36888766532 21 122 33 5566
Q ss_pred EecCCCCCCCCCCCCcHHHHHHHHHHHhHHHHHHHHHHhHhcCCCccEEEecCCCc-chHHHHHHhCCceEEEec
Q 011789 76 MTLSDGLPLGFDRSLNHEQFMSSLLHVFSAHAEEVIGQIVRSGENVHCLIADTYFV-WPSKLAKKFGLYYISFWT 149 (477)
Q Consensus 76 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~pD~iI~D~~~~-~~~~~A~~~gIP~v~~~~ 149 (477)
..++.. .. .+ +.+.+.++++ +||++|+-.+.. -...+-+...-.++=+.+
T Consensus 62 ~~~~~~---~~---~~-------------~~~~~~L~~~-----~~Dlivlagy~~IL~~~~l~~~~~~~iNiHp 112 (215)
T 3kcq_A 62 FVVKRK---PL---DI-------------EHISTVLREH-----DVDLVCLAGFMSILPEKFVTDWHHKIINIHP 112 (215)
T ss_dssp EECCBT---TB---CH-------------HHHHHHHHHT-----TCSEEEESSCCSCCCHHHHHHTTTSEEEEES
T ss_pred EEeCcc---cC---Ch-------------HHHHHHHHHh-----CCCEEEEeCCceEeCHHHHhhccCCeEEECc
Confidence 655421 00 00 2233444444 999999876644 455566666666666633
No 198
>3gi1_A LBP, laminin-binding protein of group A streptococci; zinc-binding receptor, metal-binding, helical backbone, alpha/beta domains; 2.45A {Streptococcus pyogenes} PDB: 3hjt_A
Probab=37.55 E-value=99 Score=28.04 Aligned_cols=42 Identities=17% Similarity=0.161 Sum_probs=31.1
Q ss_pred HHHHHHHHHhHhcCCCccEEEecCCCc--chHHHHHHhCCceEEEe
Q 011789 105 AHAEEVIGQIVRSGENVHCLIADTYFV--WPSKLAKKFGLYYISFW 148 (477)
Q Consensus 105 ~~~~~ll~~~~~~~~~pD~iI~D~~~~--~~~~~A~~~gIP~v~~~ 148 (477)
..+.++++.++++ +..+|+++.... .+-.+|+..|++.+.+.
T Consensus 215 ~~l~~l~~~ik~~--~v~~if~e~~~~~~~~~~la~~~g~~v~~l~ 258 (286)
T 3gi1_A 215 RQLKEIQDFVKEY--NVKTIFAEDNVNPKIAHAIAKSTGAKVKTLS 258 (286)
T ss_dssp HHHHHHHHHHHHT--TCCEEEECTTSCTHHHHHHHHTTTCEEEECC
T ss_pred HHHHHHHHHHHHc--CCCEEEEeCCCChHHHHHHHHHhCCeEEEec
Confidence 3345556666664 999999998766 55678999999988763
No 199
>1rw7_A YDR533CP; alpha-beta sandwich, DJ-1/THIJ/PFPI superfamily, unknown function; 1.80A {Saccharomyces cerevisiae} SCOP: c.23.16.2 PDB: 1qvv_A* 1qvz_A 1qvw_A
Probab=37.26 E-value=61 Score=28.56 Aligned_cols=40 Identities=13% Similarity=0.179 Sum_probs=29.9
Q ss_pred CcEEEEEcCCCcc-----------CHHHHHHHHHHHHhCCCeEEEEeCCcc
Q 011789 8 KPHAIFISYPLQG-----------HVNPSVQLALKLASQGFTITFVNTHFI 47 (477)
Q Consensus 8 ~~~il~~~~~~~G-----------H~~p~l~La~~L~~rGh~Vt~~~~~~~ 47 (477)
|+||+|+.....+ ...=+......|.+.|++|++++....
T Consensus 3 m~kvLivls~~~~~~~~~~~~~G~~~~E~~~p~~vl~~ag~~v~~~s~~g~ 53 (243)
T 1rw7_A 3 PKKVLLALTSYNDVFYSDGAKTGVFVVEALHPFNTFRKEGFEVDFVSETGK 53 (243)
T ss_dssp CCEEEEECCCCCCBCSTTSCBCCBCHHHHHHHHHHHHHTTCEEEEECSSSC
T ss_pred CceEEEEECCCCcccCCCCCCCccCHHHHHHHHHHHHHCCCEEEEECCCCC
Confidence 6799988875321 345677777888899999999997653
No 200
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=37.01 E-value=21 Score=28.34 Aligned_cols=36 Identities=22% Similarity=0.332 Sum_probs=28.5
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCcch
Q 011789 8 KPHAIFISYPLQGHVNPSVQLALKLASQGFTITFVNTHFIH 48 (477)
Q Consensus 8 ~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~ 48 (477)
+.||+++-+|..| ..+++.|.++||+|+++......
T Consensus 7 ~~~viIiG~G~~G-----~~la~~L~~~g~~v~vid~~~~~ 42 (140)
T 3fwz_A 7 CNHALLVGYGRVG-----SLLGEKLLASDIPLVVIETSRTR 42 (140)
T ss_dssp CSCEEEECCSHHH-----HHHHHHHHHTTCCEEEEESCHHH
T ss_pred CCCEEEECcCHHH-----HHHHHHHHHCCCCEEEEECCHHH
Confidence 4689988776655 47899999999999999876543
No 201
>3end_A Light-independent protochlorophyllide reductase iron-sulfur ATP-binding protein; BCHL, electron donor, DPOR, Fe protein, nitrogenase; HET: ADP; 1.63A {Rhodobacter sphaeroides 2} PDB: 3fwy_A*
Probab=36.82 E-value=35 Score=31.22 Aligned_cols=40 Identities=10% Similarity=-0.027 Sum_probs=32.6
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCc
Q 011789 7 QKPHAIFISYPLQGHVNPSVQLALKLASQGFTITFVNTHF 46 (477)
Q Consensus 7 ~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~ 46 (477)
.|+.|+|..-|+.|=..-.+.||..|+++|++|.++=...
T Consensus 40 ~~~vI~v~~KGGvGKTT~a~nLA~~La~~G~~VlliD~D~ 79 (307)
T 3end_A 40 GAKVFAVYGKGGIGKSTTSSNLSAAFSILGKRVLQIGCDP 79 (307)
T ss_dssp CCEEEEEECSTTSSHHHHHHHHHHHHHHTTCCEEEEEESS
T ss_pred CceEEEEECCCCccHHHHHHHHHHHHHHCCCeEEEEeCCC
Confidence 4556666666788888899999999999999999986554
No 202
>2q62_A ARSH; alpha/beta, flavoprotein; 1.80A {Sinorhizobium meliloti}
Probab=36.78 E-value=47 Score=29.55 Aligned_cols=40 Identities=13% Similarity=0.124 Sum_probs=27.5
Q ss_pred CCCCCcEEEEEcCCCc--cCHHHHHH-HHHHHHhCCCeEEEEe
Q 011789 4 NKTQKPHAIFISYPLQ--GHVNPSVQ-LALKLASQGFTITFVN 43 (477)
Q Consensus 4 ~~~~~~~il~~~~~~~--GH~~p~l~-La~~L~~rGh~Vt~~~ 43 (477)
....||||+++....+ |...-++. +++.|.+.|++|.++-
T Consensus 30 ~~~~~mkIliI~GS~r~~s~t~~La~~~~~~l~~~g~eve~id 72 (247)
T 2q62_A 30 FSTHRPRILILYGSLRTVSYSRLLAEEARRLLEFFGAEVKVFD 72 (247)
T ss_dssp CCCSCCEEEEEECCCCSSCHHHHHHHHHHHHHHHTTCEEEECC
T ss_pred ccCCCCeEEEEEccCCCCCHHHHHHHHHHHHHhhCCCEEEEEE
Confidence 3456789988877644 55555555 5666777899988764
No 203
>3r8n_B 30S ribosomal protein S2; protein biosynthesis, RNA, tRNA, transfer RNA, 16S ribosomal subunit, RRF; 3.00A {Escherichia coli} PDB: 2ykr_B 3fih_B* 3j18_B* 2wwl_B 3oar_B 3oaq_B 3ofb_B 3ofa_B 3ofp_B 3ofx_B 3ofy_B 3ofo_B 3r8o_B 4a2i_B 4gd1_B 4gd2_B 3i1m_B 1vs7_B* 3e1a_B 3e1c_B ...
Probab=36.71 E-value=16 Score=31.94 Aligned_cols=32 Identities=16% Similarity=0.093 Sum_probs=24.0
Q ss_pred CCccEEE-ecCCCc-chHHHHHHhCCceEEEecc
Q 011789 119 ENVHCLI-ADTYFV-WPSKLAKKFGLYYISFWTE 150 (477)
Q Consensus 119 ~~pD~iI-~D~~~~-~~~~~A~~~gIP~v~~~~~ 150 (477)
..||+|| +|+..- .+..=|.++|||.|.+.-+
T Consensus 148 ~~Pdllvv~Dp~~e~~ai~Ea~~l~IP~IalvDT 181 (218)
T 3r8n_B 148 GLPDALFVIDADHEHIAIKEANNLGIPVFAIVDT 181 (218)
T ss_dssp SCCCSCEEEETGGGHHHHHHHHHHTCCCEEECCS
T ss_pred cCCCeEEecCcccccHHHHHHHHhCCCEEEEEeC
Confidence 3688855 676444 6777899999999998544
No 204
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=36.61 E-value=31 Score=31.23 Aligned_cols=33 Identities=6% Similarity=0.145 Sum_probs=26.0
Q ss_pred CcEEEEEcC-CCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 011789 8 KPHAIFISY-PLQGHVNPSVQLALKLASQGFTITFVNTH 45 (477)
Q Consensus 8 ~~~il~~~~-~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 45 (477)
||||.|+-. |..| ..+++.|.++||+|+++...
T Consensus 11 mm~I~iIG~tG~mG-----~~la~~l~~~g~~V~~~~r~ 44 (286)
T 3c24_A 11 PKTVAILGAGGKMG-----ARITRKIHDSAHHLAAIEIA 44 (286)
T ss_dssp CCEEEEETTTSHHH-----HHHHHHHHHSSSEEEEECCS
T ss_pred CCEEEEECCCCHHH-----HHHHHHHHhCCCEEEEEECC
Confidence 579999977 7666 45788899999999976543
No 205
>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri}
Probab=36.42 E-value=31 Score=31.65 Aligned_cols=36 Identities=8% Similarity=-0.029 Sum_probs=25.6
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCc
Q 011789 7 QKPHAIFISYPLQGHVNPSVQLALKLASQGFTITFVNTHF 46 (477)
Q Consensus 7 ~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~ 46 (477)
.||+|+++ |+.|.+-. .|+++|.++||+|+.++-..
T Consensus 3 ~~~~ilVt--GatG~iG~--~l~~~L~~~g~~V~~~~R~~ 38 (321)
T 3c1o_A 3 HMEKIIIY--GGTGYIGK--FMVRASLSFSHPTFIYARPL 38 (321)
T ss_dssp -CCCEEEE--TTTSTTHH--HHHHHHHHTTCCEEEEECCC
T ss_pred cccEEEEE--cCCchhHH--HHHHHHHhCCCcEEEEECCc
Confidence 46677665 45555543 57899999999999988654
No 206
>2r85_A PURP protein PF1517; ATP-grAsp superfamily, unknown function; HET: AMP; 1.70A {Pyrococcus furiosus} SCOP: c.30.1.8 d.142.1.9 PDB: 2r84_A* 2r86_A* 2r87_A*
Probab=36.14 E-value=31 Score=31.81 Aligned_cols=35 Identities=11% Similarity=0.124 Sum_probs=28.6
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCcch
Q 011789 8 KPHAIFISYPLQGHVNPSVQLALKLASQGFTITFVNTHFIH 48 (477)
Q Consensus 8 ~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~ 48 (477)
+|||+++..+ ....+++++.++||+|.++......
T Consensus 2 ~m~Ililg~g------~~~~l~~a~~~~G~~v~~~~~~~~~ 36 (334)
T 2r85_A 2 KVRIATYASH------SALQILKGAKDEGFETIAFGSSKVK 36 (334)
T ss_dssp CSEEEEESST------THHHHHHHHHHTTCCEEEESCGGGH
T ss_pred ceEEEEECCh------hHHHHHHHHHhCCCEEEEEECCCCC
Confidence 4799998877 4678999999999999998876543
No 207
>4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans}
Probab=35.97 E-value=31 Score=31.64 Aligned_cols=29 Identities=21% Similarity=0.322 Sum_probs=25.2
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEe
Q 011789 10 HAIFISYPLQGHVNPSVQLALKLASQGFTITFVN 43 (477)
Q Consensus 10 ~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~ 43 (477)
||.|+-.|..|. ++|+.|.++||+|+++-
T Consensus 7 kIgfIGLG~MG~-----~mA~~L~~~G~~V~v~d 35 (297)
T 4gbj_A 7 KIAFLGLGNLGT-----PIAEILLEAGYELVVWN 35 (297)
T ss_dssp EEEEECCSTTHH-----HHHHHHHHTTCEEEEC-
T ss_pred cEEEEecHHHHH-----HHHHHHHHCCCeEEEEe
Confidence 899999998885 68999999999999863
No 208
>3lrx_A Putative hydrogenase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.60A {Pyrococcus furiosus}
Probab=35.92 E-value=33 Score=28.02 Aligned_cols=41 Identities=10% Similarity=-0.027 Sum_probs=32.0
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCcchhhh
Q 011789 8 KPHAIFISYPLQGHVNPSVQLALKLASQGFTITFVNTHFIHQQM 51 (477)
Q Consensus 8 ~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~~ 51 (477)
..+++++..|.. +-|++.+++.|.++|.+|+++ .....+.+
T Consensus 23 ~~~~llIaGG~G--ItPl~sm~~~l~~~~~~v~l~-g~r~~~d~ 63 (158)
T 3lrx_A 23 FGKILAIGAYTG--IVEVYPIAKAWQEIGNDVTTL-HVTFEPMV 63 (158)
T ss_dssp CSEEEEEEETTH--HHHHHHHHHHHHHHTCEEEEE-EECBGGGC
T ss_pred CCeEEEEEccCc--HHHHHHHHHHHHhcCCcEEEE-EeCCHHHh
Confidence 457888776653 999999999999999999999 65554433
No 209
>3rg8_A Phosphoribosylaminoimidazole carboxylase, PURE PR; purine biosynthesis, lyase; 1.74A {Treponema denticola} SCOP: c.23.8.0 PDB: 3rgg_A*
Probab=35.91 E-value=1.8e+02 Score=23.79 Aligned_cols=136 Identities=10% Similarity=0.097 Sum_probs=71.2
Q ss_pred EEEEEecccccCCHHHHHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCchhHHHhcCCCeEEEeeccHHHhhccCCCCcc
Q 011789 284 VLYVSFGSYAHVSKRDLIEIANGIAKSKVTFIWILRPDIVSSDDPNPLPEDFKKEVADRSMIITWCCQTSVLAHPAIGGF 363 (477)
Q Consensus 284 ~I~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~lp~~~~~~~~~nv~v~~~~p~~~lL~~~~~~~~ 363 (477)
.|-|-+||.. +....++....++..|..+-+.+-+. ...|+...+- +...+ .+...+++
T Consensus 4 ~V~Iimgs~S--D~~v~~~a~~~l~~~gi~~ev~V~sa-------HR~p~~~~~~----------~~~a~--~~~~~~Vi 62 (159)
T 3rg8_A 4 LVIILMGSSS--DMGHAEKIASELKTFGIEYAIRIGSA-------HKTAEHVVSM----------LKEYE--ALDRPKLY 62 (159)
T ss_dssp EEEEEESSGG--GHHHHHHHHHHHHHTTCEEEEEECCT-------TTCHHHHHHH----------HHHHH--TSCSCEEE
T ss_pred eEEEEECcHH--HHHHHHHHHHHHHHcCCCEEEEEEcc-------cCCHHHHHHH----------HHHhh--hcCCCcEE
Confidence 4666677765 46667788888889998876666544 3455533211 00000 11123347
Q ss_pred ccccCCchhhHHH---hcCcceecccccc---chhhHHHHHHh--hhcceeeecCCC-CcCHHHHHHHHHHHhcCCchHH
Q 011789 364 LTHCGWNSVLEGL---WCGVPLLCFPLYT---DQFTNRKLAVD--DWNVGLNLSNEK-VITKEEVSKNVHLLMGEKSGAK 434 (477)
Q Consensus 364 ItHgG~gs~~eal---~~GvP~v~~P~~~---DQ~~na~~v~~--~~G~G~~~~~~~-~~~~~~l~~~i~~~l~~~~~~~ 434 (477)
|.=.|+-.-+-++ ..-+|+|.+|... +-.+ -.-+.+ . |+.+.-- + -+++.-++..|. -+.|+ +
T Consensus 63 Ia~AG~aa~LpgvvA~~t~~PVIgVP~~~~~l~G~d-LlS~vqmp~-GvpVatv--~~~~nAa~lA~~Il-~~~d~---~ 134 (159)
T 3rg8_A 63 ITIAGRSNALSGFVDGFVKGATIACPPPSDSFAGAD-IYSSLRMPS-GISPALV--LEPKNAALLAARIF-SLYDK---E 134 (159)
T ss_dssp EEECCSSCCHHHHHHHHSSSCEEECCCCCCGGGGTH-HHHHHCCCT-TCCCEEC--CSHHHHHHHHHHHH-TTTCH---H
T ss_pred EEECCchhhhHHHHHhccCCCEEEeeCCCCCCCCcc-HHHHHhCCC-CCceEEe--cCchHHHHHHHHHH-hCCCH---H
Confidence 7776654333332 2456888888532 2222 222222 2 4433221 2 334444443332 24577 7
Q ss_pred HHHHHHHHHHHHHH
Q 011789 435 YRNAAKQVKKAMEY 448 (477)
Q Consensus 435 ~~~~a~~l~~~~~~ 448 (477)
++++.+..++++.+
T Consensus 135 l~~kl~~~r~~~~~ 148 (159)
T 3rg8_A 135 IADSVKSYMESNAQ 148 (159)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH
Confidence 88888888777765
No 210
>1wcv_1 SOJ, segregation protein; ATPase, bacterial, chromosome segregation; 1.6A {Thermus thermophilus} PDB: 2bej_A* 2bek_A*
Probab=35.90 E-value=32 Score=30.54 Aligned_cols=40 Identities=23% Similarity=0.199 Sum_probs=31.0
Q ss_pred CcEEEEEc--CCCccCHHHHHHHHHHHHhCCCeEEEEeCCcc
Q 011789 8 KPHAIFIS--YPLQGHVNPSVQLALKLASQGFTITFVNTHFI 47 (477)
Q Consensus 8 ~~~il~~~--~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~ 47 (477)
+|+++.+. -|+.|=..-.+.||..|+++|++|.++=....
T Consensus 5 ~~~vI~v~s~kGGvGKTt~a~~LA~~la~~g~~VlliD~D~~ 46 (257)
T 1wcv_1 5 KVRRIALANQKGGVGKTTTAINLAAYLARLGKRVLLVDLDPQ 46 (257)
T ss_dssp CCCEEEECCSSCCHHHHHHHHHHHHHHHHTTCCEEEEECCTT
T ss_pred CCEEEEEEeCCCCchHHHHHHHHHHHHHHCCCCEEEEECCCC
Confidence 44554443 46788888899999999999999999865554
No 211
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=35.75 E-value=17 Score=35.99 Aligned_cols=32 Identities=19% Similarity=0.393 Sum_probs=25.6
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 011789 8 KPHAIFISYPLQGHVNPSVQLALKLASQGFTITFVNT 44 (477)
Q Consensus 8 ~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 44 (477)
|+||+++-.|--| |.-|..|+++||+|+++--
T Consensus 1 Mk~VvVIGaG~~G-----L~aA~~La~~G~~V~VlEa 32 (501)
T 4dgk_A 1 MKPTTVIGAGFGG-----LALAIRLQAAGIPVLLLEQ 32 (501)
T ss_dssp CCCEEEECCHHHH-----HHHHHHHHHTTCCEEEECC
T ss_pred CCCEEEECCcHHH-----HHHHHHHHHCCCcEEEEcc
Confidence 7889888666444 6678889999999999853
No 212
>2qs7_A Uncharacterized protein; putative oxidoreductase of the DSRE/DSRF-like family, struct genomics, joint center for structural genomics; HET: MSE EPE; 2.09A {Sulfolobus solfataricus P2}
Probab=35.71 E-value=53 Score=26.36 Aligned_cols=42 Identities=17% Similarity=0.180 Sum_probs=34.0
Q ss_pred EE-EEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCcchhhh
Q 011789 10 HA-IFISYPLQGHVNPSVQLALKLASQGFTITFVNTHFIHQQM 51 (477)
Q Consensus 10 ~i-l~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~~ 51 (477)
|+ +++..+..-.+++.+.+|...++.|++|+++.+......+
T Consensus 9 kl~II~~sg~~d~~~~a~~lA~~Aaa~g~eV~iF~t~~gv~~l 51 (144)
T 2qs7_A 9 KLSIIVFSGTIDKLMPVGILTSGAAASGYEVNLFFTFWGLQAI 51 (144)
T ss_dssp EEEEEECCCSHHHHHHHHHHHHHHHHTTCEEEEEECHHHHHHT
T ss_pred CEEEEEEcCCHHHHHHHHHHHHHHHHcCCcEEEEEehHHHHHH
Confidence 55 4445567788899999999999999999999888777665
No 213
>2w70_A Biotin carboxylase; ligase, ATP-binding, fatty acid biosynthesis, nucleotide-BIN lipid synthesis, ATP-grAsp domain, fragment screening; HET: L22; 1.77A {Escherichia coli} PDB: 1bnc_A 2j9g_A* 2v58_A* 2v59_A* 2v5a_A* 2vr1_A* 2w6m_A* 1dv1_A* 2w6o_A* 2w6n_A* 2w6q_A* 2w6z_A* 2w6p_A* 2w71_A* 3jzf_A* 3jzi_A* 3rv3_A* 3rup_A* 1dv2_A* 3rv4_A* ...
Probab=35.54 E-value=70 Score=31.04 Aligned_cols=33 Identities=9% Similarity=0.155 Sum_probs=24.4
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 011789 8 KPHAIFISYPLQGHVNPSVQLALKLASQGFTITFVNTH 45 (477)
Q Consensus 8 ~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 45 (477)
|+||+++.. | ...+.+++++.+.|++|.++.+.
T Consensus 2 ~k~ilI~g~---g--~~~~~~~~a~~~~G~~vv~v~~~ 34 (449)
T 2w70_A 2 LDKIVIANR---G--EIALRILRACKELGIKTVAVHSS 34 (449)
T ss_dssp CSEEEECCC---H--HHHHHHHHHHHHHTCEEEEEEEG
T ss_pred CceEEEeCC---c--HHHHHHHHHHHHcCCeEEEEecc
Confidence 457777653 3 34568999999999999988653
No 214
>1t1j_A Hypothetical protein; structural genomics, PSI, protein structure initiative, MIDW center for structural genomics, MCSG; 1.70A {Pseudomonas aeruginosa} SCOP: c.23.14.2
Probab=35.32 E-value=54 Score=25.75 Aligned_cols=35 Identities=14% Similarity=0.260 Sum_probs=24.2
Q ss_pred CCCcEEEEEcCCCccCHH--------HHHHHHHHHHhCCCeEE
Q 011789 6 TQKPHAIFISYPLQGHVN--------PSVQLALKLASQGFTIT 40 (477)
Q Consensus 6 ~~~~~il~~~~~~~GH~~--------p~l~La~~L~~rGh~Vt 40 (477)
..+|+.++++.|=.|... -+-+.|..|.++||-+.
T Consensus 5 ~~~M~~IYIagPysg~~~n~~~~n~~~~~r~A~~l~~~G~ip~ 47 (125)
T 1t1j_A 5 QGHMRKIFLACPYSHADAEVVEQRFRACNEVAATIVRAGHVVF 47 (125)
T ss_dssp --CCCEEEEECCCCCSSHHHHHHHHHHHHHHHHHHHHTTCEEE
T ss_pred hhhhhheeEECCCCCCcchHHHHHHHHHHHHHHHHHHCCCeee
Confidence 467888899999777732 34456777889999654
No 215
>3lp6_A Phosphoribosylaminoimidazole carboxylase catalyti; alpha and beta protein, structural genomics, PSI-2, protein initiative; 1.70A {Mycobacterium tuberculosis} SCOP: c.23.8.0
Probab=35.27 E-value=1.9e+02 Score=23.97 Aligned_cols=139 Identities=11% Similarity=0.042 Sum_probs=75.1
Q ss_pred cEEEEEecccccCCHHHHHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCchhHHHhcCCCeEEEeeccHHHhhccCCCCc
Q 011789 283 SVLYVSFGSYAHVSKRDLIEIANGIAKSKVTFIWILRPDIVSSDDPNPLPEDFKKEVADRSMIITWCCQTSVLAHPAIGG 362 (477)
Q Consensus 283 ~~I~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~lp~~~~~~~~~nv~v~~~~p~~~lL~~~~~~~ 362 (477)
+.|-|-+||.. +....++....++..|..+-+.+-+. ...|+...+- +-... -...++
T Consensus 8 ~~V~IimgS~S--D~~v~~~a~~~L~~~gi~~ev~V~Sa-------HR~p~~~~~~----------~~~a~-~~g~~V-- 65 (174)
T 3lp6_A 8 PRVGVIMGSDS--DWPVMADAAAALAEFDIPAEVRVVSA-------HRTPEAMFSY----------ARGAA-ARGLEV-- 65 (174)
T ss_dssp CSEEEEESCGG--GHHHHHHHHHHHHHTTCCEEEEECCT-------TTCHHHHHHH----------HHHHH-HHTCCE--
T ss_pred CeEEEEECcHH--hHHHHHHHHHHHHHcCCCEEEEEECC-------CCCHHHHHHH----------HHHHH-hCCCCE--
Confidence 45666677765 46667888888899998876666544 3455532211 00000 012333
Q ss_pred cccccCCchhhHHH---hcCcceeccccccc---hhhHHHHHHhh-hcc--eeeecCCC-CcCHHHHHHHHHHHhcCCch
Q 011789 363 FLTHCGWNSVLEGL---WCGVPLLCFPLYTD---QFTNRKLAVDD-WNV--GLNLSNEK-VITKEEVSKNVHLLMGEKSG 432 (477)
Q Consensus 363 ~ItHgG~gs~~eal---~~GvP~v~~P~~~D---Q~~na~~v~~~-~G~--G~~~~~~~-~~~~~~l~~~i~~~l~~~~~ 432 (477)
+|.=.|+-.-+-++ ..-+|+|.+|...- -.+--.-+.+. -|+ +.... + -.++..++..|. -+.|+
T Consensus 66 iIa~AG~aa~LpgvvA~~t~~PVIgVP~~~~~l~G~daLlS~vqmp~GvpVatV~I--~~~~nAa~lAa~Il-~~~d~-- 140 (174)
T 3lp6_A 66 IIAGAGGAAHLPGMVAAATPLPVIGVPVPLGRLDGLDSLLSIVQMPAGVPVATVSI--GGAGNAGLLAVRML-GAANP-- 140 (174)
T ss_dssp EEEEEESSCCHHHHHHHHCSSCEEEEEECCSSGGGHHHHHHHHCCCTTCCCEECCT--TCHHHHHHHHHHHH-HTTCH--
T ss_pred EEEecCchhhhHHHHHhccCCCEEEeeCCCCCCCCHHHHHHHhhCCCCCeeEEEEc--CcchHHHHHHHHHH-hCCCH--
Confidence 77776654333332 25579999997522 22212223332 043 22221 2 334444444442 25677
Q ss_pred HHHHHHHHHHHHHHHHH
Q 011789 433 AKYRNAAKQVKKAMEYA 449 (477)
Q Consensus 433 ~~~~~~a~~l~~~~~~~ 449 (477)
+++++.+..++++++.
T Consensus 141 -~l~~kl~~~r~~~~~~ 156 (174)
T 3lp6_A 141 -QLRARIVAFQDRLADV 156 (174)
T ss_dssp -HHHHHHHHHHHHHHHH
T ss_pred -HHHHHHHHHHHHHHHH
Confidence 8999999998888864
No 216
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=35.12 E-value=22 Score=32.60 Aligned_cols=34 Identities=12% Similarity=0.110 Sum_probs=27.7
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCc
Q 011789 8 KPHAIFISYPLQGHVNPSVQLALKLASQGFTITFVNTHF 46 (477)
Q Consensus 8 ~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~ 46 (477)
+|||.|+-.|..|. .+|+.|+++||+|+++....
T Consensus 15 ~~~I~vIG~G~mG~-----~~A~~l~~~G~~V~~~dr~~ 48 (296)
T 3qha_A 15 QLKLGYIGLGNMGA-----PMATRMTEWPGGVTVYDIRI 48 (296)
T ss_dssp CCCEEEECCSTTHH-----HHHHHHTTSTTCEEEECSST
T ss_pred CCeEEEECcCHHHH-----HHHHHHHHCCCeEEEEeCCH
Confidence 46999998887774 67899999999999885443
No 217
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=35.07 E-value=28 Score=32.23 Aligned_cols=33 Identities=12% Similarity=0.137 Sum_probs=27.8
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhCC-CeEEEEeCC
Q 011789 8 KPHAIFISYPLQGHVNPSVQLALKLASQG-FTITFVNTH 45 (477)
Q Consensus 8 ~~~il~~~~~~~GH~~p~l~La~~L~~rG-h~Vt~~~~~ 45 (477)
+|||.|+-.|..| ..+|+.|+++| |+|+++...
T Consensus 24 ~m~IgvIG~G~mG-----~~lA~~L~~~G~~~V~~~dr~ 57 (317)
T 4ezb_A 24 MTTIAFIGFGEAA-----QSIAGGLGGRNAARLAAYDLR 57 (317)
T ss_dssp CCEEEEECCSHHH-----HHHHHHHHTTTCSEEEEECGG
T ss_pred CCeEEEECccHHH-----HHHHHHHHHcCCCeEEEEeCC
Confidence 4799999888777 67899999999 999987654
No 218
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=35.06 E-value=16 Score=31.57 Aligned_cols=34 Identities=18% Similarity=0.175 Sum_probs=25.5
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCcc
Q 011789 9 PHAIFISYPLQGHVNPSVQLALKLASQGFTITFVNTHFI 47 (477)
Q Consensus 9 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~ 47 (477)
|||+++-.|..| ..+++.|.++||+|+++.....
T Consensus 1 M~iiIiG~G~~G-----~~la~~L~~~g~~v~vid~~~~ 34 (218)
T 3l4b_C 1 MKVIIIGGETTA-----YYLARSMLSRKYGVVIINKDRE 34 (218)
T ss_dssp CCEEEECCHHHH-----HHHHHHHHHTTCCEEEEESCHH
T ss_pred CEEEEECCCHHH-----HHHHHHHHhCCCeEEEEECCHH
Confidence 678877654333 4789999999999999986543
No 219
>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}
Probab=34.96 E-value=29 Score=32.35 Aligned_cols=35 Identities=11% Similarity=0.066 Sum_probs=28.5
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 011789 6 TQKPHAIFISYPLQGHVNPSVQLALKLASQGFTITFVNTH 45 (477)
Q Consensus 6 ~~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 45 (477)
+-.|||.|+-.|..| ..+|..|.+.||+|+++...
T Consensus 12 ~~~~kI~iIG~G~mG-----~ala~~L~~~G~~V~~~~r~ 46 (335)
T 1z82_A 12 HMEMRFFVLGAGSWG-----TVFAQMLHENGEEVILWARR 46 (335)
T ss_dssp --CCEEEEECCSHHH-----HHHHHHHHHTTCEEEEECSS
T ss_pred ccCCcEEEECcCHHH-----HHHHHHHHhCCCeEEEEeCC
Confidence 345899999888888 47889999999999998764
No 220
>1hyq_A MIND, cell division inhibitor (MIND-1); MINC, FTSZ, bacterial cell division, cell cycle; 2.60A {Archaeoglobus fulgidus} SCOP: c.37.1.10
Probab=34.73 E-value=33 Score=30.45 Aligned_cols=39 Identities=21% Similarity=0.294 Sum_probs=29.9
Q ss_pred CcEEEEE--cCCCccCHHHHHHHHHHHHhCCCeEEEEeCCc
Q 011789 8 KPHAIFI--SYPLQGHVNPSVQLALKLASQGFTITFVNTHF 46 (477)
Q Consensus 8 ~~~il~~--~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~ 46 (477)
|++++.+ +-|+.|=..-.+.||..|+++|++|.++-...
T Consensus 1 M~~~I~v~s~kgGvGKTt~a~~LA~~la~~g~~VlliD~D~ 41 (263)
T 1hyq_A 1 MVRTITVASGKGGTGKTTITANLGVALAQLGHDVTIVDADI 41 (263)
T ss_dssp -CEEEEEEESSSCSCHHHHHHHHHHHHHHTTCCEEEEECCC
T ss_pred CCeEEEEECCCCCCCHHHHHHHHHHHHHhCCCcEEEEECCC
Confidence 4455444 34678888999999999999999999986554
No 221
>2lnd_A De novo designed protein, PFK fold; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Artificial gene}
Probab=34.72 E-value=56 Score=23.06 Aligned_cols=49 Identities=22% Similarity=0.272 Sum_probs=32.8
Q ss_pred hcCcceeccccccchhhHHHH---HHhhhcceeeecCCCCcCHHHHHHHHHHHhc
Q 011789 377 WCGVPLLCFPLYTDQFTNRKL---AVDDWNVGLNLSNEKVITKEEVSKNVHLLMG 428 (477)
Q Consensus 377 ~~GvP~v~~P~~~DQ~~na~~---v~~~~G~G~~~~~~~~~~~~~l~~~i~~~l~ 428 (477)
-+|+|+|++--.+.|.+.... ..+. |+.--+- +..++++|.+.+++.|.
T Consensus 49 dngkplvvfvngasqndvnefqneakke-gvsydvl--kstdpeeltqrvreflk 100 (112)
T 2lnd_A 49 DNGKPLVVFVNGASQNDVNEFQNEAKKE-GVSYDVL--KSTDPEELTQRVREFLK 100 (112)
T ss_dssp TCCSCEEEEECSCCHHHHHHHHHHHHHH-TCEEEEE--ECCCHHHHHHHHHHHHH
T ss_pred hcCCeEEEEecCcccccHHHHHHHHHhc-Ccchhhh--ccCCHHHHHHHHHHHHH
Confidence 479999998877777654433 2334 5544431 26789999999988763
No 222
>2i2c_A Probable inorganic polyphosphate/ATP-NAD kinase 1; NADP bound of lmnadk1, transferase; HET: DTA PG4; 1.85A {Listeria monocytogenes egd-e} PDB: 2i1w_A* 2i2a_A* 2i2b_A* 2i29_A* 2i2d_A* 2i2e_A* 3v7u_A* 3v7w_A* 3v7y_A* 3v80_A* 3v8m_A* 3v8n_A* 3v8p_A* 4dy6_A* 2i2f_A* 2q5f_A* 3v8q_A* 3v8r_A*
Probab=34.40 E-value=17 Score=32.99 Aligned_cols=50 Identities=16% Similarity=0.149 Sum_probs=35.3
Q ss_pred ccccccCCchhhHHHhc------CcceeccccccchhhHHHHHHhhhcceeeecCCCCcCHHHHHHHHHHHhcC
Q 011789 362 GFLTHCGWNSVLEGLWC------GVPLLCFPLYTDQFTNRKLAVDDWNVGLNLSNEKVITKEEVSKNVHLLMGE 429 (477)
Q Consensus 362 ~~ItHgG~gs~~eal~~------GvP~v~~P~~~DQ~~na~~v~~~~G~G~~~~~~~~~~~~~l~~~i~~~l~~ 429 (477)
++|.=||=||+.+++.. ++|++.+|.. -+|. + ..+.++++.++++.+++.
T Consensus 38 ~vv~lGGDGT~l~aa~~~~~~~~~~PilGIn~G--------------~lgf-l---~~~~~~~~~~~l~~l~~g 93 (272)
T 2i2c_A 38 IVISIGGDGTFLSAFHQYEERLDEIAFIGIHTG--------------HLGF-Y---ADWRPAEADKLVKLLAKG 93 (272)
T ss_dssp EEEEEESHHHHHHHHHHTGGGTTTCEEEEEESS--------------SCCS-S---CCBCGGGHHHHHHHHHTT
T ss_pred EEEEEcCcHHHHHHHHHHhhcCCCCCEEEEeCC--------------CCCc-C---CcCCHHHHHHHHHHHHcC
Confidence 39999999999999765 8899888751 1221 1 134567777777777754
No 223
>2vpq_A Acetyl-COA carboxylase; bacteria, ATP-grAsp domain, biotin carboxylase, ligase; HET: ANP; 2.1A {Staphylococcus aureus}
Probab=34.08 E-value=46 Score=32.42 Aligned_cols=35 Identities=9% Similarity=0.071 Sum_probs=25.4
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCcc
Q 011789 8 KPHAIFISYPLQGHVNPSVQLALKLASQGFTITFVNTHFI 47 (477)
Q Consensus 8 ~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~ 47 (477)
|+||+++.. | ...+.+++++.+.|++|.++.+...
T Consensus 1 ~k~ilI~g~---g--~~~~~i~~a~~~~G~~vv~v~~~~~ 35 (451)
T 2vpq_A 1 MKKVLIANR---G--EIAVRIIRACRDLGIQTVAIYSEGD 35 (451)
T ss_dssp -CEEEECCC---H--HHHHHHHHHHHHTTCEEEEEEEGGG
T ss_pred CceEEEeCC---C--HHHHHHHHHHHHcCCEEEEEecccc
Confidence 567887653 3 2466899999999999998875443
No 224
>3ego_A Probable 2-dehydropantoate 2-reductase; structural genomics, PANE, unknown function, cytoplasm, NADP, oxidoreductase; 1.90A {Bacillus subtilis}
Probab=33.99 E-value=25 Score=32.40 Aligned_cols=38 Identities=16% Similarity=-0.027 Sum_probs=30.0
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCcc-hhhh
Q 011789 8 KPHAIFISYPLQGHVNPSVQLALKLASQGFTITFVNTHFI-HQQM 51 (477)
Q Consensus 8 ~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~-~~~~ 51 (477)
+|||+|+-.|+.|- .+|..|. .||+|+++..... .+.+
T Consensus 2 ~mkI~IiGaGa~G~-----~~a~~L~-~g~~V~~~~r~~~~~~~l 40 (307)
T 3ego_A 2 SLKIGIIGGGSVGL-----LCAYYLS-LYHDVTVVTRRQEQAAAI 40 (307)
T ss_dssp CCEEEEECCSHHHH-----HHHHHHH-TTSEEEEECSCHHHHHHH
T ss_pred CCEEEEECCCHHHH-----HHHHHHh-cCCceEEEECCHHHHHHH
Confidence 48999998888885 5688888 9999999987653 3444
No 225
>2xw6_A MGS, methylglyoxal synthase; lyase; 1.08A {Thermus SP} PDB: 2x8w_A 1wo8_A
Probab=33.91 E-value=1.4e+02 Score=23.61 Aligned_cols=97 Identities=11% Similarity=0.079 Sum_probs=60.0
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHhC--CCeEEEEeCCcchhhh-c-cCCCCCCccccccccCCCCCeEEEecCCC
Q 011789 6 TQKPHAIFISYPLQGHVNPSVQLALKLASQ--GFTITFVNTHFIHQQM-T-KASPEMGSDIFAGVRKSGLDIRYMTLSDG 81 (477)
Q Consensus 6 ~~~~~il~~~~~~~GH~~p~l~La~~L~~r--Gh~Vt~~~~~~~~~~~-~-~g~~~~~~~~~~~~~~~~~~~~~~~l~~~ 81 (477)
+.||+|++...- .+=.-++.+|+.|.+. ||++ +.+..-...+ . . |+++..+...
T Consensus 1 ~~~~~ialsv~D--~dK~~~v~~a~~~~~ll~Gf~l--~AT~gTa~~L~e~~------------------Gl~v~~v~k~ 58 (134)
T 2xw6_A 1 SHMRALALIAHD--AKKEEMVAFCQRHREVLARFPL--VATGTTGRRIEEAT------------------GLTVEKLLSG 58 (134)
T ss_dssp CCSCEEEEEECG--GGHHHHHHHHHHTHHHHTTSCE--EECHHHHHHHHHHH------------------CCCCEECSCG
T ss_pred CCccEEEEEEec--ccHHHHHHHHHHHHHHhCCCEE--EEccHHHHHHHHhh------------------CceEEEEEec
Confidence 357888887553 4456789999999999 9954 4666666666 5 6 4444444321
Q ss_pred CCCCCCCCCcHHHHHHHHHHHhHHHHHHHHHHhHhcCCCccEEEecCC--C--------cchHHHHHHhCCceEEE
Q 011789 82 LPLGFDRSLNHEQFMSSLLHVFSAHAEEVIGQIVRSGENVHCLIADTY--F--------VWPSKLAKKFGLYYISF 147 (477)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~pD~iI~D~~--~--------~~~~~~A~~~gIP~v~~ 147 (477)
+. . ..+++ ...+.+ .+.|+||.-.- . ..-..+|-.++||++..
T Consensus 59 -~~-----e------------G~p~I---~d~I~~--geIdlVInt~~pl~~~~h~~D~~~IrR~A~~~~IP~~T~ 111 (134)
T 2xw6_A 59 -PL-----G------------GDQQM---GARVAE--GRILAVIFFRDPLTAQPHEPDVQALLRVCDVHGVPLATN 111 (134)
T ss_dssp -GG-----T------------HHHHH---HHHHHT--TCEEEEEEECCTTTCCTTSCCSHHHHHHHHHHTCCEECS
T ss_pred -CC-----C------------CcchH---HHHHHC--CCccEEEEccCcccCCCccchHHHHHHHHHHcCCCeEcC
Confidence 10 0 11222 333333 39999996432 1 12567899999999764
No 226
>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A*
Probab=33.77 E-value=54 Score=30.96 Aligned_cols=37 Identities=11% Similarity=0.150 Sum_probs=26.0
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCc
Q 011789 6 TQKPHAIFISYPLQGHVNPSVQLALKLASQGFTITFVNTHF 46 (477)
Q Consensus 6 ~~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~ 46 (477)
..||+|++. |+.|-+- ..|++.|.++||+|+.+....
T Consensus 27 ~~~~~vlVt--GatG~iG--~~l~~~L~~~g~~V~~~~r~~ 63 (379)
T 2c5a_A 27 SENLKISIT--GAGGFIA--SHIARRLKHEGHYVIASDWKK 63 (379)
T ss_dssp TSCCEEEEE--TTTSHHH--HHHHHHHHHTTCEEEEEESSC
T ss_pred ccCCeEEEE--CCccHHH--HHHHHHHHHCCCeEEEEECCC
Confidence 456777665 4445443 457889999999999887543
No 227
>3t6k_A Response regulator receiver; flavodoxin-like, structural genomics, joint center for struc genomics, JCSG, protein structure initiative; HET: MSE; 1.86A {Chloroflexus aurantiacus} SCOP: c.23.1.0
Probab=33.58 E-value=74 Score=24.42 Aligned_cols=32 Identities=19% Similarity=0.139 Sum_probs=22.5
Q ss_pred CccEEEecCCCc--chHHHHHHh-------CCceEEEecch
Q 011789 120 NVHCLIADTYFV--WPSKLAKKF-------GLYYISFWTES 151 (477)
Q Consensus 120 ~pD~iI~D~~~~--~~~~~A~~~-------gIP~v~~~~~~ 151 (477)
+||+||+|.... .+..+++.+ .+|++.++...
T Consensus 48 ~~dlvl~D~~lp~~~g~~~~~~lr~~~~~~~~pii~~t~~~ 88 (136)
T 3t6k_A 48 LPDALICDVLLPGIDGYTLCKRVRQHPLTKTLPILMLTAQG 88 (136)
T ss_dssp CCSEEEEESCCSSSCHHHHHHHHHHSGGGTTCCEEEEECTT
T ss_pred CCCEEEEeCCCCCCCHHHHHHHHHcCCCcCCccEEEEecCC
Confidence 899999998655 455555433 58888886543
No 228
>1xrs_B D-lysine 5,6-aminomutase beta subunit; TIM barrel, rossmann domain, PLP, cobalamin, 5'-deoxyad radical, adenosylcobalamin; HET: B12 PLP 5AD; 2.80A {Clostridium sticklandii} SCOP: c.23.6.1 d.230.4.1
Probab=33.46 E-value=77 Score=28.43 Aligned_cols=45 Identities=9% Similarity=-0.038 Sum_probs=38.2
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHH--------HHhC-CCeEEEEeCCcchhhh
Q 011789 7 QKPHAIFISYPLQGHVNPSVQLALK--------LASQ-GFTITFVNTHFIHQQM 51 (477)
Q Consensus 7 ~~~~il~~~~~~~GH~~p~l~La~~--------L~~r-Gh~Vt~~~~~~~~~~~ 51 (477)
.+.+|++.+.++-.|-....-++.. |..+ |++|.++....-.+.+
T Consensus 119 ~~~~Vvlatv~gD~HdiG~~iv~~~k~~~~~~~L~~~~G~eVi~LG~~vp~e~i 172 (262)
T 1xrs_B 119 RKIVVVGASTGTDAHTVGIDAIMNMKGYAGHYGLERYEMIDAYNLGSQVANEDF 172 (262)
T ss_dssp SCEEEEEEEBTTCCCCHHHHHHHSTTCBTTBCCGGGCTTEEEEECCSSBCHHHH
T ss_pred CCCEEEEEeCCCCCchHHHHHHhhhhcccchHHHHhcCCcEEEECCCCCCHHHH
Confidence 4578999999999999999888877 9999 9999998876555544
No 229
>1ydg_A Trp repressor binding protein WRBA; tetramer, structural genomics, PSI, protein structure initiative; 2.00A {Deinococcus radiodurans} SCOP: c.23.5.8 PDB: 1yrh_A*
Probab=33.38 E-value=55 Score=27.90 Aligned_cols=39 Identities=15% Similarity=0.129 Sum_probs=28.4
Q ss_pred CCCcEEEEEcCCCccCHHHHHH-HHHHHHhCCCeEEEEeC
Q 011789 6 TQKPHAIFISYPLQGHVNPSVQ-LALKLASQGFTITFVNT 44 (477)
Q Consensus 6 ~~~~~il~~~~~~~GH~~p~l~-La~~L~~rGh~Vt~~~~ 44 (477)
..||||+++-....|+..-+.. +++.|.+.|++|.++.-
T Consensus 4 ~~mmkilii~~S~~g~T~~la~~i~~~l~~~g~~v~~~~l 43 (211)
T 1ydg_A 4 TAPVKLAIVFYSSTGTGYAMAQEAAEAGRAAGAEVRLLKV 43 (211)
T ss_dssp -CCCEEEEEECCSSSHHHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CCCCeEEEEEECCCChHHHHHHHHHHHHhcCCCEEEEEec
Confidence 3678998887776888776655 46667778999887754
No 230
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=33.37 E-value=14 Score=36.46 Aligned_cols=36 Identities=22% Similarity=0.157 Sum_probs=29.7
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCcc
Q 011789 7 QKPHAIFISYPLQGHVNPSVQLALKLASQGFTITFVNTHFI 47 (477)
Q Consensus 7 ~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~ 47 (477)
..|||+++-.|-.|. .||+.|.+.||+|+++-....
T Consensus 2 ~~M~iiI~G~G~vG~-----~la~~L~~~~~~v~vId~d~~ 37 (461)
T 4g65_A 2 NAMKIIILGAGQVGG-----TLAENLVGENNDITIVDKDGD 37 (461)
T ss_dssp CCEEEEEECCSHHHH-----HHHHHTCSTTEEEEEEESCHH
T ss_pred CcCEEEEECCCHHHH-----HHHHHHHHCCCCEEEEECCHH
Confidence 458999998887774 589999999999999976543
No 231
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=33.27 E-value=36 Score=29.80 Aligned_cols=149 Identities=11% Similarity=0.075 Sum_probs=76.6
Q ss_pred hhccCCCCcEEEEEecccccCCHHHHHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCchhHHHhc-CCCeEEEeeccHHH
Q 011789 275 WLDKQPKGSVLYVSFGSYAHVSKRDLIEIANGIAKSKVTFIWILRPDIVSSDDPNPLPEDFKKEV-ADRSMIITWCCQTS 353 (477)
Q Consensus 275 ~l~~~~~~~~I~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~lp~~~~~~~-~~nv~v~~~~p~~~ 353 (477)
|++-. .+++++|..|..+ ...+..|...|..+.++-. . +.+.+.+-. ..++.+....-...
T Consensus 26 fl~L~-gk~VLVVGgG~va-------~~ka~~Ll~~GA~VtVvap-~---------~~~~l~~l~~~~~i~~i~~~~~~~ 87 (223)
T 3dfz_A 26 MLDLK-GRSVLVVGGGTIA-------TRRIKGFLQEGAAITVVAP-T---------VSAEINEWEAKGQLRVKRKKVGEE 87 (223)
T ss_dssp EECCT-TCCEEEECCSHHH-------HHHHHHHGGGCCCEEEECS-S---------CCHHHHHHHHTTSCEEECSCCCGG
T ss_pred EEEcC-CCEEEEECCCHHH-------HHHHHHHHHCCCEEEEECC-C---------CCHHHHHHHHcCCcEEEECCCCHh
Confidence 44543 4568888877554 3445666677887766532 1 222232211 23455553222334
Q ss_pred hhccCCCCccccccCCchhhHHHh----cCcceeccccccchhhHHH-----HHHhhhcceeeecCCC--CcCHHHHHHH
Q 011789 354 VLAHPAIGGFLTHCGWNSVLEGLW----CGVPLLCFPLYTDQFTNRK-----LAVDDWNVGLNLSNEK--VITKEEVSKN 422 (477)
Q Consensus 354 lL~~~~~~~~ItHgG~gs~~eal~----~GvP~v~~P~~~DQ~~na~-----~v~~~~G~G~~~~~~~--~~~~~~l~~~ 422 (477)
.|..+++ +|.--|.-.+.+.++ .|+|+-+ .|.|..+. .+.+- ++-+.+..+. ..-+..|++.
T Consensus 88 dL~~adL--VIaAT~d~~~N~~I~~~ak~gi~VNv----vD~p~~~~f~~Paiv~rg-~l~iaIST~G~sP~la~~iR~~ 160 (223)
T 3dfz_A 88 DLLNVFF--IVVATNDQAVNKFVKQHIKNDQLVNM----ASSFSDGNIQIPAQFSRG-RLSLAISTDGASPLLTKRIKED 160 (223)
T ss_dssp GSSSCSE--EEECCCCTHHHHHHHHHSCTTCEEEC---------CCSEECCEEEEET-TEEEEEECTTSCHHHHHHHHHH
T ss_pred HhCCCCE--EEECCCCHHHHHHHHHHHhCCCEEEE----eCCcccCeEEEeeEEEeC-CEEEEEECCCCCcHHHHHHHHH
Confidence 5666776 887777766555544 4555432 45544432 22333 4444442111 2234556666
Q ss_pred HHHHhcCCchHHHHHHHHHHHHHHHHH
Q 011789 423 VHLLMGEKSGAKYRNAAKQVKKAMEYA 449 (477)
Q Consensus 423 i~~~l~~~~~~~~~~~a~~l~~~~~~~ 449 (477)
|...+... ...+-+.+.++++++++.
T Consensus 161 ie~~lp~~-~~~~~~~~~~~R~~vk~~ 186 (223)
T 3dfz_A 161 LSSNYDES-YTQYTQFLYECRVLIHRL 186 (223)
T ss_dssp HHHHSCTH-HHHHHHHHHHHHHHHHHC
T ss_pred HHHHccHH-HHHHHHHHHHHHHHHHHH
Confidence 76666432 236777788888888764
No 232
>2ahr_A Putative pyrroline carboxylate reductase; pyrroline reductase, proline biosynthesis, NAD(P protein, rossmann fold, doain swapping; HET: NAP; 2.15A {Streptococcus pyogenes} SCOP: a.100.1.10 c.2.1.6 PDB: 2amf_A
Probab=33.25 E-value=32 Score=30.56 Aligned_cols=34 Identities=6% Similarity=-0.021 Sum_probs=26.0
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 011789 7 QKPHAIFISYPLQGHVNPSVQLALKLASQGFTITFVNTH 45 (477)
Q Consensus 7 ~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 45 (477)
.||||.|+-.|..|. .+++.|.+.||+|+++...
T Consensus 2 ~~m~i~iiG~G~mG~-----~~a~~l~~~g~~v~~~~~~ 35 (259)
T 2ahr_A 2 NAMKIGIIGVGKMAS-----AIIKGLKQTPHELIISGSS 35 (259)
T ss_dssp -CCEEEEECCSHHHH-----HHHHHHTTSSCEEEEECSS
T ss_pred CccEEEEECCCHHHH-----HHHHHHHhCCCeEEEECCC
Confidence 578999998776664 5688899999999877543
No 233
>2hy5_A Putative sulfurtransferase DSRE; DSRE, DSRF, sulfur, structural genomics, PSI, protein initiative, berkeley structural genomics center, BSGC, TRAN; 1.72A {Allochromatium vinosum} SCOP: c.114.1.1 PDB: 2hyb_A
Probab=33.23 E-value=87 Score=24.41 Aligned_cols=43 Identities=14% Similarity=-0.022 Sum_probs=30.9
Q ss_pred cEE-EEEcCCCcc--CHHHHHHHHHHHHhCCCeE-EEEeCCcchhhh
Q 011789 9 PHA-IFISYPLQG--HVNPSVQLALKLASQGFTI-TFVNTHFIHQQM 51 (477)
Q Consensus 9 ~~i-l~~~~~~~G--H~~p~l~La~~L~~rGh~V-t~~~~~~~~~~~ 51 (477)
||+ ++++.+..| .....+.+|..+.+.||+| .++.........
T Consensus 1 mk~~iiv~~~p~~~~~~~~al~~a~a~~~~g~~v~~vff~~dGV~~~ 47 (130)
T 2hy5_A 1 MKFALQINEGPYQHQASDSAYQFAKAALEKGHEIFRVFFYHDGVNNS 47 (130)
T ss_dssp CEEEEEECSCTTTSTHHHHHHHHHHHHHHTTCEEEEEEECGGGGGGG
T ss_pred CEEEEEEeCCCCCcHHHHHHHHHHHHHHhcCCeeCEEEEechHHHHH
Confidence 344 444445554 4566789999999999999 888877766555
No 234
>3sbx_A Putative uncharacterized protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: AMP; 2.50A {Mycobacterium marinum M}
Probab=33.22 E-value=55 Score=27.80 Aligned_cols=45 Identities=9% Similarity=0.101 Sum_probs=31.2
Q ss_pred CCCcEEEEEcCCCccC----HHHHHHHHHHHHhCCCeEEEEeCC-cchhhh
Q 011789 6 TQKPHAIFISYPLQGH----VNPSVQLALKLASQGFTITFVNTH-FIHQQM 51 (477)
Q Consensus 6 ~~~~~il~~~~~~~GH----~~p~l~La~~L~~rGh~Vt~~~~~-~~~~~~ 51 (477)
...|+|.+++... +. ..-..+|++.|+++|+.|.+-..+ ...+.+
T Consensus 11 ~~~~~I~Vfg~s~-~~~~~~~~~A~~lg~~la~~g~~lv~GGG~~GlM~a~ 60 (189)
T 3sbx_A 11 PGRWTVAVYCAAA-PTHPELLELAGAVGAAIAARGWTLVWGGGHVSAMGAV 60 (189)
T ss_dssp --CCEEEEECCSS-CCCHHHHHHHHHHHHHHHHTTCEEEECCBCSHHHHHH
T ss_pred CCCeEEEEEEeCC-CCChHHHHHHHHHHHHHHHCCCEEEECCCccCHHHHH
Confidence 4558999998765 43 344678888899999988777655 554444
No 235
>2an1_A Putative kinase; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG, transferase; 2.00A {Salmonella typhimurium}
Probab=33.16 E-value=39 Score=30.80 Aligned_cols=38 Identities=13% Similarity=0.082 Sum_probs=24.3
Q ss_pred CCCcEEEEEcCCCccCHHH-HHHHHHHHHhCCCeEEEEe
Q 011789 6 TQKPHAIFISYPLQGHVNP-SVQLALKLASQGFTITFVN 43 (477)
Q Consensus 6 ~~~~~il~~~~~~~GH~~p-~l~La~~L~~rGh~Vt~~~ 43 (477)
..|+||+++..+..++... .-.+.+.|.++|++|.+..
T Consensus 3 ~~mkki~ii~np~~~~~~~~~~~i~~~l~~~g~~v~~~~ 41 (292)
T 2an1_A 3 NHFKCIGIVGHPRHPTALTTHEMLYRWLCDQGYEVIVEQ 41 (292)
T ss_dssp -CCCEEEEECC-------CHHHHHHHHHHHTTCEEEEEH
T ss_pred CcCcEEEEEEcCCCHHHHHHHHHHHHHHHHCCCEEEEec
Confidence 3478999999987766655 5568888999999987753
No 236
>1e2b_A Enzyme IIB-cellobiose; phosphotransferase system, transferas transport, phosphorylation; NMR {Escherichia coli} SCOP: c.44.2.1 PDB: 1iib_A 1h9c_A* 2wwv_D 2wy2_D
Probab=32.93 E-value=70 Score=24.11 Aligned_cols=36 Identities=8% Similarity=0.012 Sum_probs=27.1
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEE
Q 011789 7 QKPHAIFISYPLQGHVNPSVQLALKLASQGFTITFV 42 (477)
Q Consensus 7 ~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~ 42 (477)
.|+||+++|..|.|==.-.-.+-+.+.++|.++.+-
T Consensus 2 ~mkkIll~Cg~G~sTS~l~~k~~~~~~~~gi~~~i~ 37 (106)
T 1e2b_A 2 EKKHIYLFSSAGMSTSLLVSKMRAQAEKYEVPVIIE 37 (106)
T ss_dssp CCEEEEEECSSSTTTHHHHHHHHHHHHHSCCSEEEE
T ss_pred CCcEEEEECCCchhHHHHHHHHHHHHHHCCCCeEEE
Confidence 478999999986655555557888888999877653
No 237
>1ydh_A AT5G11950; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG; 2.15A {Arabidopsis thaliana} SCOP: c.129.1.1 PDB: 2q4d_A
Probab=32.64 E-value=67 Score=27.91 Aligned_cols=47 Identities=6% Similarity=0.131 Sum_probs=33.0
Q ss_pred CCCCcEEEEEcCCCcc----CHHHHHHHHHHHHhCCCeEEEEeCC-cchhhh
Q 011789 5 KTQKPHAIFISYPLQG----HVNPSVQLALKLASQGFTITFVNTH-FIHQQM 51 (477)
Q Consensus 5 ~~~~~~il~~~~~~~G----H~~p~l~La~~L~~rGh~Vt~~~~~-~~~~~~ 51 (477)
...|++|.+++....+ +..-...|++.|+++|+.|.+-..+ ...+.+
T Consensus 6 ~~~m~~V~V~ggsr~~~~~~~~~~A~~lg~~LA~~g~~lV~GGg~~GlM~aa 57 (216)
T 1ydh_A 6 RSRFRKICVFCGSHSGHREVFSDAAIELGNELVKRKIDLVYGGGSVGLMGLI 57 (216)
T ss_dssp CCSCSEEEEECCSCCCSSHHHHHHHHHHHHHHHHTTCEEEECCCSSHHHHHH
T ss_pred CCCCCeEEEEeCCCCCCCcHHHHHHHHHHHHHHHCCCEEEECCCcccHhHHH
Confidence 3566789999766554 3456788889999999998776665 444443
No 238
>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa}
Probab=32.57 E-value=71 Score=30.03 Aligned_cols=26 Identities=31% Similarity=0.451 Sum_probs=20.5
Q ss_pred cCCCCccccccCCchh---hHHHhcCcceec
Q 011789 357 HPAIGGFLTHCGWNSV---LEGLWCGVPLLC 384 (477)
Q Consensus 357 ~~~~~~~ItHgG~gs~---~eal~~GvP~v~ 384 (477)
++++ +|++||.-+. ..|...|+|+++
T Consensus 92 ~PDv--Vi~~g~~~s~p~~laA~~~~iP~vi 120 (365)
T 3s2u_A 92 RPVC--VLGLGGYVTGPGGLAARLNGVPLVI 120 (365)
T ss_dssp CCSE--EEECSSSTHHHHHHHHHHTTCCEEE
T ss_pred CCCE--EEEcCCcchHHHHHHHHHcCCCEEE
Confidence 5676 9999998764 556778999986
No 239
>2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A
Probab=32.30 E-value=47 Score=30.58 Aligned_cols=41 Identities=17% Similarity=0.160 Sum_probs=21.4
Q ss_pred CCCCCCCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 011789 1 MAGNKTQKPHAIFISYPLQGHVNPSVQLALKLASQGFTITFVNT 44 (477)
Q Consensus 1 ~~~~~~~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 44 (477)
|++....|++-++++. +.|-+- ..|+++|.++||+|+.+.-
T Consensus 1 ~~~~~~~~~~~vlVTG-atGfIG--~~l~~~Ll~~G~~V~~~~r 41 (338)
T 2rh8_A 1 MATQHPIGKKTACVVG-GTGFVA--SLLVKLLLQKGYAVNTTVR 41 (338)
T ss_dssp --------CCEEEEEC-TTSHHH--HHHHHHHHHTTCEEEEEES
T ss_pred CCcCcCCCCCEEEEEC-CchHHH--HHHHHHHHHCCCEEEEEEc
Confidence 6666655544444443 444443 3578999999999987654
No 240
>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}
Probab=32.09 E-value=27 Score=32.12 Aligned_cols=35 Identities=20% Similarity=0.156 Sum_probs=27.6
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 011789 6 TQKPHAIFISYPLQGHVNPSVQLALKLASQGFTITFVNTH 45 (477)
Q Consensus 6 ~~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 45 (477)
..+|||.|+-.|..|. .+|+.|+++||+|+++...
T Consensus 7 ~~~~~IgiIG~G~mG~-----~~A~~l~~~G~~V~~~dr~ 41 (306)
T 3l6d_A 7 SFEFDVSVIGLGAMGT-----IMAQVLLKQGKRVAIWNRS 41 (306)
T ss_dssp CCSCSEEEECCSHHHH-----HHHHHHHHTTCCEEEECSS
T ss_pred cCCCeEEEECCCHHHH-----HHHHHHHHCCCEEEEEeCC
Confidence 3568999997776664 6889999999999987543
No 241
>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2
Probab=32.04 E-value=41 Score=30.56 Aligned_cols=35 Identities=11% Similarity=0.077 Sum_probs=25.4
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCc
Q 011789 8 KPHAIFISYPLQGHVNPSVQLALKLASQGFTITFVNTHF 46 (477)
Q Consensus 8 ~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~ 46 (477)
||+|+++ |+.|.+- ..|+++|.++||+|+.++-..
T Consensus 4 ~~~ilVt--GatG~iG--~~l~~~L~~~g~~V~~~~R~~ 38 (313)
T 1qyd_A 4 KSRVLIV--GGTGYIG--KRIVNASISLGHPTYVLFRPE 38 (313)
T ss_dssp CCCEEEE--STTSTTH--HHHHHHHHHTTCCEEEECCSC
T ss_pred CCEEEEE--cCCcHHH--HHHHHHHHhCCCcEEEEECCC
Confidence 6777766 4455553 457899999999999987653
No 242
>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*
Probab=32.00 E-value=55 Score=27.93 Aligned_cols=37 Identities=19% Similarity=0.175 Sum_probs=24.7
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHH-hCCCeEEEEeCCc
Q 011789 7 QKPHAIFISYPLQGHVNPSVQLALKLA-SQGFTITFVNTHF 46 (477)
Q Consensus 7 ~~~~il~~~~~~~GH~~p~l~La~~L~-~rGh~Vt~~~~~~ 46 (477)
.|||.++++.+ .|-+ -..+++.|. ++||+|+.+.-..
T Consensus 3 ~mmk~vlVtGa-sg~i--G~~~~~~l~~~~g~~V~~~~r~~ 40 (221)
T 3r6d_A 3 AMYXYITILGA-AGQI--AQXLTATLLTYTDMHITLYGRQL 40 (221)
T ss_dssp CSCSEEEEEST-TSHH--HHHHHHHHHHHCCCEEEEEESSH
T ss_pred ceEEEEEEEeC-CcHH--HHHHHHHHHhcCCceEEEEecCc
Confidence 46674444433 3333 257889999 8999999987653
No 243
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=32.00 E-value=29 Score=27.16 Aligned_cols=35 Identities=14% Similarity=0.132 Sum_probs=25.0
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCc
Q 011789 7 QKPHAIFISYPLQGHVNPSVQLALKLASQGFTITFVNTHF 46 (477)
Q Consensus 7 ~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~ 46 (477)
.|+||+++-.|..| ..+++.|.++|++|+++....
T Consensus 5 ~~~~v~I~G~G~iG-----~~~a~~l~~~g~~v~~~d~~~ 39 (144)
T 2hmt_A 5 KNKQFAVIGLGRFG-----GSIVKELHRMGHEVLAVDINE 39 (144)
T ss_dssp -CCSEEEECCSHHH-----HHHHHHHHHTTCCCEEEESCH
T ss_pred cCCcEEEECCCHHH-----HHHHHHHHHCCCEEEEEeCCH
Confidence 45678888654444 457899999999999886543
No 244
>2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A*
Probab=31.88 E-value=40 Score=31.86 Aligned_cols=36 Identities=17% Similarity=0.251 Sum_probs=25.6
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHhCC-CeEEEEeCC
Q 011789 6 TQKPHAIFISYPLQGHVNPSVQLALKLASQG-FTITFVNTH 45 (477)
Q Consensus 6 ~~~~~il~~~~~~~GH~~p~l~La~~L~~rG-h~Vt~~~~~ 45 (477)
.+||+|++. |+.|-+- ..|++.|.++| |+|+.+...
T Consensus 30 ~~~~~ilVt--GatG~iG--~~l~~~L~~~g~~~V~~~~r~ 66 (377)
T 2q1s_A 30 LANTNVMVV--GGAGFVG--SNLVKRLLELGVNQVHVVDNL 66 (377)
T ss_dssp GTTCEEEEE--TTTSHHH--HHHHHHHHHTTCSEEEEECCC
T ss_pred hCCCEEEEE--CCccHHH--HHHHHHHHHcCCceEEEEECC
Confidence 356777665 4445443 56789999999 999998654
No 245
>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis}
Probab=31.84 E-value=2.6e+02 Score=24.57 Aligned_cols=35 Identities=11% Similarity=0.066 Sum_probs=25.1
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCc
Q 011789 9 PHAIFISYPLQGHVNPSVQLALKLASQGFTITFVNTHF 46 (477)
Q Consensus 9 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~ 46 (477)
+|.++++.++.| + -..+++.|+++|++|..+....
T Consensus 5 ~k~vlVTGas~g-I--G~~~a~~l~~~G~~V~~~~r~~ 39 (281)
T 3m1a_A 5 AKVWLVTGASSG-F--GRAIAEAAVAAGDTVIGTARRT 39 (281)
T ss_dssp CCEEEETTTTSH-H--HHHHHHHHHHTTCEEEEEESSG
T ss_pred CcEEEEECCCCh-H--HHHHHHHHHHCCCEEEEEeCCH
Confidence 466777766543 2 2478899999999998876543
No 246
>2gt1_A Lipopolysaccharide heptosyltransferase-1; GT-B fold; 1.90A {Escherichia coli UTI89} PDB: 2h1f_A* 2h1h_A*
Probab=31.65 E-value=49 Score=30.43 Aligned_cols=28 Identities=11% Similarity=0.040 Sum_probs=22.5
Q ss_pred CccEEEecCCCcchHHHHHHhCCceEEEec
Q 011789 120 NVHCLIADTYFVWPSKLAKKFGLYYISFWT 149 (477)
Q Consensus 120 ~pD~iI~D~~~~~~~~~A~~~gIP~v~~~~ 149 (477)
+-|++|+- ..+...+|..+|+|+|.++.
T Consensus 253 ~a~l~I~~--DSG~~HlAaa~g~P~v~lfg 280 (326)
T 2gt1_A 253 GAKFVVSV--DTGLSHLTAALDRPNITVYG 280 (326)
T ss_dssp TCSEEEEE--SSHHHHHHHHTTCCEEEEES
T ss_pred hCCEEEec--CCcHHHHHHHcCCCEEEEEC
Confidence 66999976 34677888899999999964
No 247
>4eg0_A D-alanine--D-alanine ligase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.65A {Burkholderia ambifaria} PDB: 4egq_A 4egj_A
Probab=31.62 E-value=52 Score=30.22 Aligned_cols=39 Identities=5% Similarity=-0.087 Sum_probs=29.1
Q ss_pred CcEEEEEcCCCcc-C---HHHHHHHHHHHHhCCCeEEEEeCCc
Q 011789 8 KPHAIFISYPLQG-H---VNPSVQLALKLASQGFTITFVNTHF 46 (477)
Q Consensus 8 ~~~il~~~~~~~G-H---~~p~l~La~~L~~rGh~Vt~~~~~~ 46 (477)
++||+++..|-.+ | +.-...++++|.++||+|..+.+..
T Consensus 13 ~~~v~vl~gg~s~E~~vsl~s~~~v~~al~~~g~~v~~i~~~~ 55 (317)
T 4eg0_A 13 FGKVAVLFGGESAEREVSLTSGRLVLQGLRDAGIDAHPFDPAE 55 (317)
T ss_dssp GCEEEEECCCSSTTHHHHHHHHHHHHHHHHHTTCEEEEECTTT
T ss_pred cceEEEEECCCCCcceeeHHHHHHHHHHHHHCCCEEEEEeCCC
Confidence 4688888765332 2 3467889999999999999988543
No 248
>1ulz_A Pyruvate carboxylase N-terminal domain; biotin carboxylase; 2.20A {Aquifex aeolicus} SCOP: b.84.2.1 c.30.1.1 d.142.1.2
Probab=31.59 E-value=1e+02 Score=29.84 Aligned_cols=35 Identities=9% Similarity=0.108 Sum_probs=25.2
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCcc
Q 011789 8 KPHAIFISYPLQGHVNPSVQLALKLASQGFTITFVNTHFI 47 (477)
Q Consensus 8 ~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~ 47 (477)
|+||+++.. | .-.+.+++++.+.|++|.++.+...
T Consensus 2 ~k~ilI~g~---g--~~~~~~~~a~~~~G~~vv~v~~~~~ 36 (451)
T 1ulz_A 2 VNKVLVANR---G--EIAVRIIRACKELGIPTVAIYNEVE 36 (451)
T ss_dssp CSSEEECCC---H--HHHHHHHHHHHHHTCCEEEEECGGG
T ss_pred CceEEEECC---c--HHHHHHHHHHHHcCCeEEEEechhh
Confidence 357777743 3 2357899999999999998876443
No 249
>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}
Probab=31.57 E-value=49 Score=30.46 Aligned_cols=36 Identities=8% Similarity=0.146 Sum_probs=25.5
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCc
Q 011789 7 QKPHAIFISYPLQGHVNPSVQLALKLASQGFTITFVNTHF 46 (477)
Q Consensus 7 ~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~ 46 (477)
.+|+|++. |+.|.+- ..|++.|.++||+|+.++...
T Consensus 12 ~~M~ilVt--GatG~iG--~~l~~~L~~~g~~V~~~~r~~ 47 (342)
T 2x4g_A 12 AHVKYAVL--GATGLLG--HHAARAIRAAGHDLVLIHRPS 47 (342)
T ss_dssp CCCEEEEE--STTSHHH--HHHHHHHHHTTCEEEEEECTT
T ss_pred cCCEEEEE--CCCcHHH--HHHHHHHHHCCCEEEEEecCh
Confidence 45777665 4455443 467889999999999987543
No 250
>1t5b_A Acyl carrier protein phosphodiesterase; structural genomics, FMN, alpha/beta/alpha sandwich, PSI, protein structure initiative; HET: FMN; 1.40A {Salmonella typhimurium} SCOP: c.23.5.3 PDB: 1tik_A 2z98_A* 2d5i_A* 1v4b_A* 2z9b_A* 2z9c_A* 2z9d_A*
Probab=31.55 E-value=46 Score=27.96 Aligned_cols=37 Identities=5% Similarity=0.044 Sum_probs=25.0
Q ss_pred CcEEEEEcCCCc---cCHHHHHH-HHHHHHhCC--CeEEEEeC
Q 011789 8 KPHAIFISYPLQ---GHVNPSVQ-LALKLASQG--FTITFVNT 44 (477)
Q Consensus 8 ~~~il~~~~~~~---GH~~p~l~-La~~L~~rG--h~Vt~~~~ 44 (477)
||||+++....+ |...-++. +++.|.++| ++|.++--
T Consensus 1 Mmkilii~~S~~~~~s~t~~la~~~~~~l~~~g~~~~v~~~dl 43 (201)
T 1t5b_A 1 MSKVLVLKSSILAGYSQSGQLTDYFIEQWREKHVADEITVRDL 43 (201)
T ss_dssp CCEEEEEECCSSGGGCHHHHHHHHHHHHHHHHCTTCEEEEEET
T ss_pred CCeEEEEEeCCCCCCChHHHHHHHHHHHHHHhCCCCeEEEEec
Confidence 678877766544 66666654 466677776 88887653
No 251
>1p9o_A Phosphopantothenoylcysteine synthetase; ligase; 2.30A {Homo sapiens} SCOP: c.72.3.1
Probab=31.55 E-value=41 Score=31.20 Aligned_cols=24 Identities=13% Similarity=0.171 Sum_probs=19.9
Q ss_pred HHHHHHHHHHhCCCeEEEEeCCcc
Q 011789 24 PSVQLALKLASQGFTITFVNTHFI 47 (477)
Q Consensus 24 p~l~La~~L~~rGh~Vt~~~~~~~ 47 (477)
.-.++|+++.++|++|++++.+..
T Consensus 67 mG~aiAe~~~~~Ga~V~lv~g~~s 90 (313)
T 1p9o_A 67 RGATSAEAFLAAGYGVLFLYRARS 90 (313)
T ss_dssp HHHHHHHHHHHTTCEEEEEEETTS
T ss_pred HHHHHHHHHHHCCCEEEEEecCCC
Confidence 345789999999999999987653
No 252
>1qkk_A DCTD, C4-dicarboxylate transport transcriptional regulatory protein; receiver domain, 2-component signal transduction; 1.7A {Sinorhizobium meliloti} SCOP: c.23.1.1 PDB: 1l5z_A 1l5y_A
Probab=31.48 E-value=1.1e+02 Score=23.82 Aligned_cols=49 Identities=10% Similarity=0.100 Sum_probs=33.1
Q ss_pred cCcceeccccccchhhHHHHHHhhhcceeeecCCCCcCHHHHHHHHHHHhcCC
Q 011789 378 CGVPLLCFPLYTDQFTNRKLAVDDWNVGLNLSNEKVITKEEVSKNVHLLMGEK 430 (477)
Q Consensus 378 ~GvP~v~~P~~~DQ~~na~~v~~~~G~G~~~~~~~~~~~~~l~~~i~~~l~~~ 430 (477)
..+|+|++--..+ ......+.+. |+--.+. +.++.++|.++|+.++...
T Consensus 74 ~~~pii~ls~~~~-~~~~~~~~~~-g~~~~l~--kP~~~~~L~~~i~~~~~~~ 122 (155)
T 1qkk_A 74 PDLPMILVTGHGD-IPMAVQAIQD-GAYDFIA--KPFAADRLVQSARRAEEKR 122 (155)
T ss_dssp TTSCEEEEECGGG-HHHHHHHHHT-TCCEEEE--SSCCHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCC-hHHHHHHHhc-CCCeEEe--CCCCHHHHHHHHHHHHHHH
Confidence 4788887754433 4455555566 7655552 4789999999999988543
No 253
>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*
Probab=31.46 E-value=46 Score=30.41 Aligned_cols=33 Identities=6% Similarity=0.011 Sum_probs=23.5
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCc
Q 011789 10 HAIFISYPLQGHVNPSVQLALKLASQGFTITFVNTHF 46 (477)
Q Consensus 10 ~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~ 46 (477)
+|+++ |+.|.+- ..|+++|.++||+|+.++-..
T Consensus 13 ~ilVt--GatG~iG--~~l~~~L~~~g~~V~~l~R~~ 45 (318)
T 2r6j_A 13 KILIF--GGTGYIG--NHMVKGSLKLGHPTYVFTRPN 45 (318)
T ss_dssp CEEEE--TTTSTTH--HHHHHHHHHTTCCEEEEECTT
T ss_pred eEEEE--CCCchHH--HHHHHHHHHCCCcEEEEECCC
Confidence 55554 4445553 467899999999999987654
No 254
>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}
Probab=31.33 E-value=50 Score=29.96 Aligned_cols=33 Identities=21% Similarity=0.319 Sum_probs=25.8
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 011789 7 QKPHAIFISYPLQGHVNPSVQLALKLASQGFTITFVNT 44 (477)
Q Consensus 7 ~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 44 (477)
.+|||.|+-.|..|. .+++.|.+.||+|+++..
T Consensus 3 ~~~~i~iiG~G~~G~-----~~a~~l~~~g~~V~~~~~ 35 (301)
T 3cky_A 3 KSIKIGFIGLGAMGK-----PMAINLLKEGVTVYAFDL 35 (301)
T ss_dssp -CCEEEEECCCTTHH-----HHHHHHHHTTCEEEEECS
T ss_pred CCCEEEEECccHHHH-----HHHHHHHHCCCeEEEEeC
Confidence 468999998877775 467889999999987654
No 255
>2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A*
Probab=31.25 E-value=31 Score=31.18 Aligned_cols=32 Identities=25% Similarity=0.235 Sum_probs=25.0
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 011789 8 KPHAIFISYPLQGHVNPSVQLALKLASQGFTITFVNTH 45 (477)
Q Consensus 8 ~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 45 (477)
||||.|+-.|..|. .+++.|.+ ||+|+++...
T Consensus 1 M~~i~iiG~G~~G~-----~~a~~l~~-g~~V~~~~~~ 32 (289)
T 2cvz_A 1 MEKVAFIGLGAMGY-----PMAGHLAR-RFPTLVWNRT 32 (289)
T ss_dssp -CCEEEECCSTTHH-----HHHHHHHT-TSCEEEECSS
T ss_pred CCeEEEEcccHHHH-----HHHHHHhC-CCeEEEEeCC
Confidence 68999998888775 46888889 9999887543
No 256
>1mio_B Nitrogenase molybdenum iron protein (beta chain); HET: HCA CFM CLP; 3.00A {Clostridium pasteurianum} SCOP: c.92.2.3
Probab=31.23 E-value=1e+02 Score=30.13 Aligned_cols=25 Identities=28% Similarity=0.531 Sum_probs=21.7
Q ss_pred CccEEEecCCCcchHHHHHHhCCceEEE
Q 011789 120 NVHCLIADTYFVWPSKLAKKFGLYYISF 147 (477)
Q Consensus 120 ~pD~iI~D~~~~~~~~~A~~~gIP~v~~ 147 (477)
+||++|.+.. ...+|+++|||++.+
T Consensus 385 ~pDl~ig~~~---~~~~a~k~gip~~~~ 409 (458)
T 1mio_B 385 GVDLLISNTY---GKFIAREENIPFVRF 409 (458)
T ss_dssp CCSEEEESGG---GHHHHHHHTCCEEEC
T ss_pred CCCEEEeCcc---hHHHHHHcCCCEEEe
Confidence 9999998853 578899999999986
No 257
>1q74_A 1D-MYO-inosityl 2-acetamido-2-deoxy-alpha-D- glucopyranoside deacetylase (MSHB); rossmann fold, zinc aminohydrolase; HET: PE4; 1.70A {Mycobacterium tuberculosis} SCOP: c.134.1.1 PDB: 1q7t_A*
Probab=31.17 E-value=1.2e+02 Score=27.78 Aligned_cols=36 Identities=14% Similarity=0.134 Sum_probs=21.2
Q ss_pred cEE-EEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 011789 9 PHA-IFISYPLQGHVNPSVQLALKLASQGFTITFVNTH 45 (477)
Q Consensus 9 ~~i-l~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 45 (477)
++| ++.++|--= ..-+-.....|+++|++|++++-.
T Consensus 5 ~~vL~v~AHPDDe-~l~~ggtla~~~~~G~~V~vv~lT 41 (303)
T 1q74_A 5 PRLLFVHAHPDDE-SLSNGATIAHYTSRGAQVHVVTCT 41 (303)
T ss_dssp CEEEEEESSTTHH-HHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CeEEEEEeCCchH-HHhHHHHHHHHHHCCCcEEEEEEc
Confidence 454 555555332 222334555667789999998633
No 258
>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}
Probab=31.14 E-value=50 Score=32.63 Aligned_cols=37 Identities=11% Similarity=0.047 Sum_probs=30.9
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHhC-CC-eEEEEeCCcc
Q 011789 6 TQKPHAIFISYPLQGHVNPSVQLALKLASQ-GF-TITFVNTHFI 47 (477)
Q Consensus 6 ~~~~~il~~~~~~~GH~~p~l~La~~L~~r-Gh-~Vt~~~~~~~ 47 (477)
..+|||.++-.|..| +.+|..|+++ || +|+++-....
T Consensus 16 ~~~mkIaVIGlG~mG-----~~lA~~la~~~G~~~V~~~D~~~~ 54 (478)
T 3g79_A 16 GPIKKIGVLGMGYVG-----IPAAVLFADAPCFEKVLGFQRNSK 54 (478)
T ss_dssp CSCCEEEEECCSTTH-----HHHHHHHHHSTTCCEEEEECCCCT
T ss_pred CCCCEEEEECcCHHH-----HHHHHHHHHhCCCCeEEEEECChh
Confidence 467899999888888 5789999999 99 9999875544
No 259
>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*
Probab=30.97 E-value=30 Score=31.88 Aligned_cols=38 Identities=18% Similarity=0.218 Sum_probs=26.3
Q ss_pred CCCCCcEEEEEcCCCccCHHHHHHHHHHHHhCCC--eEEEEeCCc
Q 011789 4 NKTQKPHAIFISYPLQGHVNPSVQLALKLASQGF--TITFVNTHF 46 (477)
Q Consensus 4 ~~~~~~~il~~~~~~~GH~~p~l~La~~L~~rGh--~Vt~~~~~~ 46 (477)
.+..+|||+++-.|+.|-. +|..|+..|| +|+++....
T Consensus 3 ~~~~~mkI~IiGaG~vG~~-----~a~~l~~~g~~~~V~l~d~~~ 42 (319)
T 1lld_A 3 TTVKPTKLAVIGAGAVGST-----LAFAAAQRGIAREIVLEDIAK 42 (319)
T ss_dssp ----CCEEEEECCSHHHHH-----HHHHHHHTTCCSEEEEECSSH
T ss_pred cCCCCCEEEEECCCHHHHH-----HHHHHHhCCCCCEEEEEeCCh
Confidence 3455689999976555543 6778999999 999987654
No 260
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=30.87 E-value=53 Score=28.38 Aligned_cols=37 Identities=16% Similarity=0.125 Sum_probs=25.5
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCcc
Q 011789 7 QKPHAIFISYPLQGHVNPSVQLALKLASQGFTITFVNTHFI 47 (477)
Q Consensus 7 ~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~ 47 (477)
..|+|++. |+.|.+- ..|+++|.++||+|+.++-...
T Consensus 20 ~~~~ilVt--GatG~iG--~~l~~~L~~~G~~V~~~~R~~~ 56 (236)
T 3e8x_A 20 QGMRVLVV--GANGKVA--RYLLSELKNKGHEPVAMVRNEE 56 (236)
T ss_dssp -CCEEEEE--TTTSHHH--HHHHHHHHHTTCEEEEEESSGG
T ss_pred CCCeEEEE--CCCChHH--HHHHHHHHhCCCeEEEEECChH
Confidence 44676655 4444443 4678999999999999986543
No 261
>2pju_A Propionate catabolism operon regulatory protein; structural genomics, PRPR, transcriptional regulation, PSI- 2, protein structure initiative; 2.10A {Escherichia coli} SCOP: c.92.3.1
Probab=30.80 E-value=43 Score=29.37 Aligned_cols=41 Identities=15% Similarity=0.249 Sum_probs=34.2
Q ss_pred HHHHHHHHHHhHhcCCCccEEEecCCCcchHHHHHHhCCceEEEec
Q 011789 104 SAHAEEVIGQIVRSGENVHCLIADTYFVWPSKLAKKFGLYYISFWT 149 (477)
Q Consensus 104 ~~~~~~ll~~~~~~~~~pD~iI~D~~~~~~~~~A~~~gIP~v~~~~ 149 (477)
.+..+..++++.++ ++|+||.|. .+..+|+++|+|.+.+.+
T Consensus 140 ~ee~~~~i~~l~~~--G~~vVVG~~---~~~~~A~~~Gl~~vlI~s 180 (225)
T 2pju_A 140 EEDARGQINELKAN--GTEAVVGAG---LITDLAEEAGMTGIFIYS 180 (225)
T ss_dssp HHHHHHHHHHHHHT--TCCEEEESH---HHHHHHHHTTSEEEESSC
T ss_pred HHHHHHHHHHHHHC--CCCEEECCH---HHHHHHHHcCCcEEEECC
Confidence 55677888888775 999999985 368899999999999874
No 262
>3bgw_A DNAB-like replicative helicase; ATPase, replication; 3.91A {Bacillus phage SPP1}
Probab=30.65 E-value=1.9e+02 Score=28.00 Aligned_cols=42 Identities=7% Similarity=0.135 Sum_probs=35.6
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCcchhhh
Q 011789 10 HAIFISYPLQGHVNPSVQLALKLASQGFTITFVNTHFIHQQM 51 (477)
Q Consensus 10 ~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~~ 51 (477)
-+++...|+.|=..-.+.+|...+.+|..|.|++.....+.+
T Consensus 199 liiIaG~pG~GKTtlal~ia~~~a~~g~~vl~fSlEms~~ql 240 (444)
T 3bgw_A 199 FVLIAARPSMGKTAFALKQAKNMSDNDDVVNLHSLEMGKKEN 240 (444)
T ss_dssp EEEEEECSSSSHHHHHHHHHHHHHHTTCEEEEECSSSCTTHH
T ss_pred EEEEEeCCCCChHHHHHHHHHHHHHcCCEEEEEECCCCHHHH
Confidence 467777889999999999999999999999999987765444
No 263
>3m6m_D Sensory/regulatory protein RPFC; RPFF, REC, enoyl-COA hydratase, lyase-transferase COMP; 2.50A {Xanthomonas campestris PV}
Probab=30.63 E-value=65 Score=25.07 Aligned_cols=31 Identities=10% Similarity=0.056 Sum_probs=22.1
Q ss_pred CccEEEecCCCc--chHHHHHHh---------CCceEEEecc
Q 011789 120 NVHCLIADTYFV--WPSKLAKKF---------GLYYISFWTE 150 (477)
Q Consensus 120 ~pD~iI~D~~~~--~~~~~A~~~---------gIP~v~~~~~ 150 (477)
+||+||.|.... .+..+++.+ .+|.+.++..
T Consensus 58 ~~dlvl~D~~mp~~~g~~~~~~lr~~~~~~~~~~pii~~s~~ 99 (143)
T 3m6m_D 58 DYDAVIVDLHMPGMNGLDMLKQLRVMQASGMRYTPVVVLSAD 99 (143)
T ss_dssp CCSEEEEESCCSSSCHHHHHHHHHHHHHTTCCCCCEEEEESC
T ss_pred CCCEEEEeCCCCCCCHHHHHHHHHhchhccCCCCeEEEEeCC
Confidence 899999997655 456666554 2788887654
No 264
>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa}
Probab=30.61 E-value=36 Score=30.82 Aligned_cols=35 Identities=6% Similarity=0.066 Sum_probs=25.2
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCc
Q 011789 8 KPHAIFISYPLQGHVNPSVQLALKLASQGFTITFVNTHF 46 (477)
Q Consensus 8 ~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~ 46 (477)
||+|+++ |+.|.+- ..|+++|.++||+|+.++-..
T Consensus 2 ~~~vlVt--GatG~iG--~~l~~~L~~~g~~V~~~~R~~ 36 (307)
T 2gas_A 2 ENKILIL--GPTGAIG--RHIVWASIKAGNPTYALVRKT 36 (307)
T ss_dssp CCCEEEE--STTSTTH--HHHHHHHHHHTCCEEEEECCS
T ss_pred CcEEEEE--CCCchHH--HHHHHHHHhCCCcEEEEECCC
Confidence 5677665 4555554 357889999999999987654
No 265
>2z04_A Phosphoribosylaminoimidazole carboxylase ATPase subunit; purine nucleotide biosynthetic pathway, structural genomics, NPPSFA; 2.35A {Aquifex aeolicus}
Probab=30.39 E-value=54 Score=30.76 Aligned_cols=35 Identities=9% Similarity=-0.063 Sum_probs=26.6
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCcc
Q 011789 8 KPHAIFISYPLQGHVNPSVQLALKLASQGFTITFVNTHFI 47 (477)
Q Consensus 8 ~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~ 47 (477)
|+||+++..+ .-...++++|.++||+|.++.+...
T Consensus 1 M~~Ililg~g-----~~~~~~~~a~~~~G~~v~~~~~~~~ 35 (365)
T 2z04_A 1 MLTVGILGGG-----QLGWMTILEGRKLGFKFHVLEDKEN 35 (365)
T ss_dssp -CEEEEECCS-----HHHHHHHHHHGGGTCEEEEECSSSS
T ss_pred CCEEEEECCC-----HHHHHHHHHHHHCCCEEEEEeCCCC
Confidence 6789888644 4467889999999999998876543
No 266
>2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis}
Probab=30.36 E-value=39 Score=31.02 Aligned_cols=34 Identities=15% Similarity=0.248 Sum_probs=23.3
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 011789 8 KPHAIFISYPLQGHVNPSVQLALKLASQGFTITFVNTH 45 (477)
Q Consensus 8 ~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 45 (477)
||+|++. |+.|-+- ..|++.|.++||+|+.+...
T Consensus 1 M~~ilVt--GatG~iG--~~l~~~L~~~g~~V~~~~r~ 34 (330)
T 2c20_A 1 MNSILIC--GGAGYIG--SHAVKKLVDEGLSVVVVDNL 34 (330)
T ss_dssp -CEEEEE--TTTSHHH--HHHHHHHHHTTCEEEEEECC
T ss_pred CCEEEEE--CCCcHHH--HHHHHHHHhCCCEEEEEeCC
Confidence 5777665 3344333 56789999999999988643
No 267
>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}
Probab=30.30 E-value=2.5e+02 Score=24.43 Aligned_cols=34 Identities=15% Similarity=0.220 Sum_probs=25.4
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCc
Q 011789 10 HAIFISYPLQGHVNPSVQLALKLASQGFTITFVNTHF 46 (477)
Q Consensus 10 ~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~ 46 (477)
|+++++.++.| =-..+++.|+++|++|.++....
T Consensus 7 k~vlVTGas~g---IG~aia~~l~~~G~~V~~~~r~~ 40 (257)
T 3imf_A 7 KVVIITGGSSG---MGKGMATRFAKEGARVVITGRTK 40 (257)
T ss_dssp CEEEETTTTSH---HHHHHHHHHHHTTCEEEEEESCH
T ss_pred CEEEEECCCCH---HHHHHHHHHHHCCCEEEEEeCCH
Confidence 56777776654 23678999999999998876543
No 268
>3ax6_A Phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, riken structural genomics/proteomics in RSGI, ATP grAsp, ATP binding; HET: ADP; 2.20A {Thermotoga maritima}
Probab=30.09 E-value=70 Score=30.19 Aligned_cols=35 Identities=11% Similarity=0.071 Sum_probs=26.6
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCcc
Q 011789 8 KPHAIFISYPLQGHVNPSVQLALKLASQGFTITFVNTHFI 47 (477)
Q Consensus 8 ~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~ 47 (477)
|+||+++..+ .....++++|.+.||+|.++.+...
T Consensus 1 M~~Ililg~g-----~~g~~~~~a~~~~G~~v~~~~~~~~ 35 (380)
T 3ax6_A 1 MKKIGIIGGG-----QLGKMMTLEAKKMGFYVIVLDPTPR 35 (380)
T ss_dssp CCEEEEECCS-----HHHHHHHHHHHHTTCEEEEEESSTT
T ss_pred CCEEEEECCC-----HHHHHHHHHHHHCCCEEEEEeCCCC
Confidence 5789998764 2346778889999999998876543
No 269
>1tvm_A PTS system, galactitol-specific IIB component; phosphotransferase system (PTS), P-loop; NMR {Escherichia coli}
Probab=30.02 E-value=75 Score=24.22 Aligned_cols=38 Identities=8% Similarity=0.037 Sum_probs=30.6
Q ss_pred CCCcEEEEEcCCCccCHHH-HHHHHHHHHhCCCeEEEEe
Q 011789 6 TQKPHAIFISYPLQGHVNP-SVQLALKLASQGFTITFVN 43 (477)
Q Consensus 6 ~~~~~il~~~~~~~GH~~p-~l~La~~L~~rGh~Vt~~~ 43 (477)
..|+||+++|..|.|.-.- .-.|-+.+.+.|.++.+-.
T Consensus 19 ~~~kkIlvvC~sG~gTS~ll~~kl~~~~~~~gi~~~V~~ 57 (113)
T 1tvm_A 19 GSKRKIIVACGGAVATSTMAAEEIKELCQSHNIPVELIQ 57 (113)
T ss_dssp CSSEEEEEESCSCSSHHHHHHHHHHHHHHHTTCCEEEEE
T ss_pred ccccEEEEECCCCHHHHHHHHHHHHHHHHHcCCeEEEEE
Confidence 4678999999999999874 6777888889999865543
No 270
>2d1p_B TUSC, hypothetical UPF0116 protein YHEM; tRNA modification, sulfur transfer, structural genomics, translation; 2.15A {Escherichia coli} SCOP: c.114.1.1
Probab=30.01 E-value=66 Score=24.71 Aligned_cols=44 Identities=9% Similarity=-0.052 Sum_probs=31.4
Q ss_pred CcEEE-EEcCCCccCH--HHHHHHHHHHHhCCCeEEEEeCCcchhhh
Q 011789 8 KPHAI-FISYPLQGHV--NPSVQLALKLASQGFTITFVNTHFIHQQM 51 (477)
Q Consensus 8 ~~~il-~~~~~~~GH~--~p~l~La~~L~~rGh~Vt~~~~~~~~~~~ 51 (477)
|+|++ ++..+-+|+. .-.+.+|..+.+.||+|.++-........
T Consensus 1 Mkk~~~vv~~~P~g~~~~~~al~~a~a~~a~~~~v~vff~~DGV~~~ 47 (119)
T 2d1p_B 1 MKRIAFVFSTAPHGTAAGREGLDALLATSALTDDLAVFFIADGVFQL 47 (119)
T ss_dssp CCCEEEEECSCTTTSTHHHHHHHHHHHHHTTCSCEEEEECGGGGGGG
T ss_pred CcEEEEEEcCCCCCcHHHHHHHHHHHHHHhCCCCEEEEEehHHHHHH
Confidence 44454 4445556766 55688899999999999998777666555
No 271
>1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2
Probab=29.99 E-value=49 Score=30.48 Aligned_cols=33 Identities=18% Similarity=0.181 Sum_probs=22.9
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 011789 8 KPHAIFISYPLQGHVNPSVQLALKLASQGFTITFVNT 44 (477)
Q Consensus 8 ~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 44 (477)
||+|++. |+.|-+- ..|++.|.++||+|+.+..
T Consensus 1 M~~vlVT--GatG~iG--~~l~~~L~~~g~~V~~~~r 33 (347)
T 1orr_A 1 MAKLLIT--GGCGFLG--SNLASFALSQGIDLIVFDN 33 (347)
T ss_dssp -CEEEEE--TTTSHHH--HHHHHHHHHTTCEEEEEEC
T ss_pred CcEEEEe--CCCchhH--HHHHHHHHhCCCEEEEEeC
Confidence 5676655 4445443 4678999999999999864
No 272
>4hv4_A UDP-N-acetylmuramate--L-alanine ligase; MURC, yersinia pestis peptidoglycan synthesis; HET: AMP; 2.25A {Yersinia pestis} PDB: 2f00_A
Probab=29.82 E-value=54 Score=32.52 Aligned_cols=36 Identities=22% Similarity=0.266 Sum_probs=27.5
Q ss_pred CCCCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEe
Q 011789 4 NKTQKPHAIFISYPLQGHVNPSVQLALKLASQGFTITFVN 43 (477)
Q Consensus 4 ~~~~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~ 43 (477)
++..++||.|+-.++.| +-.+|+.|.++|++|+..=
T Consensus 18 ~~~~~~~v~viGiG~sG----~s~~A~~l~~~G~~V~~~D 53 (494)
T 4hv4_A 18 EMRRVRHIHFVGIGGAG----MGGIAEVLANEGYQISGSD 53 (494)
T ss_dssp ----CCEEEEETTTSTT----HHHHHHHHHHTTCEEEEEC
T ss_pred hhccCCEEEEEEEcHhh----HHHHHHHHHhCCCeEEEEE
Confidence 34567899999999887 3458999999999999763
No 273
>2gk4_A Conserved hypothetical protein; alpha-beta-alpha sandwich, flavoprotein, structural genomics protein structure initiative; 1.83A {Streptococcus pneumoniae}
Probab=29.80 E-value=37 Score=29.92 Aligned_cols=26 Identities=23% Similarity=0.468 Sum_probs=21.1
Q ss_pred ccCHHHHHHHHHHHHhCCCeEEEEeCCc
Q 011789 19 QGHVNPSVQLALKLASQGFTITFVNTHF 46 (477)
Q Consensus 19 ~GH~~p~l~La~~L~~rGh~Vt~~~~~~ 46 (477)
.|-+ -.++|++|.++|++|++++.+.
T Consensus 28 SG~m--G~aiA~~~~~~Ga~V~lv~~~~ 53 (232)
T 2gk4_A 28 TGHL--GKIITETLLSAGYEVCLITTKR 53 (232)
T ss_dssp CCHH--HHHHHHHHHHTTCEEEEEECTT
T ss_pred CCHH--HHHHHHHHHHCCCEEEEEeCCc
Confidence 5544 3568999999999999998775
No 274
>2ph1_A Nucleotide-binding protein; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; 2.70A {Archaeoglobus fulgidus dsm 4304} PDB: 3kb1_A*
Probab=29.69 E-value=53 Score=29.19 Aligned_cols=42 Identities=19% Similarity=0.243 Sum_probs=32.0
Q ss_pred CCcEEEEEcC--CCccCHHHHHHHHHHHHhCCCeEEEEeCCcch
Q 011789 7 QKPHAIFISY--PLQGHVNPSVQLALKLASQGFTITFVNTHFIH 48 (477)
Q Consensus 7 ~~~~il~~~~--~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~ 48 (477)
.|++++.+.. |+.|=..-.+.||..|+++|++|.++=.....
T Consensus 16 ~~~~vI~v~s~kGGvGKTT~a~nLA~~la~~G~~VlliD~D~~~ 59 (262)
T 2ph1_A 16 KIKSRIAVMSGKGGVGKSTVTALLAVHYARQGKKVGILDADFLG 59 (262)
T ss_dssp TCSCEEEEECSSSCTTHHHHHHHHHHHHHHTTCCEEEEECCSSC
T ss_pred cCCeEEEEEcCCCCCCHHHHHHHHHHHHHHCCCeEEEEeCCCCC
Confidence 4555555443 57788888999999999999999998655443
No 275
>1pno_A NAD(P) transhydrogenase subunit beta; nucleotide binding fold, oxidoreductase; HET: NAP; 2.10A {Rhodospirillum rubrum} SCOP: c.31.1.4 PDB: 1pnq_A* 1xlt_C* 2oor_C* 1ptj_C* 2oo5_C*
Probab=29.67 E-value=53 Score=27.12 Aligned_cols=40 Identities=10% Similarity=0.068 Sum_probs=30.4
Q ss_pred cEEEEEcCCCc---cCHHHHHHHHHHHHhCCCeEEEEeCCcch
Q 011789 9 PHAIFISYPLQ---GHVNPSVQLALKLASQGFTITFVNTHFIH 48 (477)
Q Consensus 9 ~~il~~~~~~~---GH~~p~l~La~~L~~rGh~Vt~~~~~~~~ 48 (477)
.+|+++|.=+. --.++...|++.|.++|.+|.|..+|-.-
T Consensus 24 ~~ViIvPGYGmAvAqAQ~~v~el~~~L~~~G~~V~faIHPVAG 66 (180)
T 1pno_A 24 SKVIIVPGYGMAVAQAQHALREMADVLKKEGVEVSYAIHPVAG 66 (180)
T ss_dssp SEEEEEECHHHHHHTCHHHHHHHHHHHHHTTCEEEEEECTTCT
T ss_pred CeEEEECChHHHHHHHHHHHHHHHHHHHHCCCeEEEEeccccc
Confidence 57777765321 13468899999999999999999988654
No 276
>3q0i_A Methionyl-tRNA formyltransferase; structural genomics, center for structural genomics of infec diseases, csgid; 1.89A {Vibrio cholerae}
Probab=29.66 E-value=73 Score=29.51 Aligned_cols=35 Identities=23% Similarity=0.133 Sum_probs=25.7
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCc
Q 011789 7 QKPHAIFISYPLQGHVNPSVQLALKLASQGFTITFVNTHF 46 (477)
Q Consensus 7 ~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~ 46 (477)
++|||+|+-.+..+ +...++|.++||+|..+.+..
T Consensus 6 ~~mrivf~Gt~~fa-----~~~L~~L~~~~~~v~~Vvt~p 40 (318)
T 3q0i_A 6 QSLRIVFAGTPDFA-----ARHLAALLSSEHEIIAVYTQP 40 (318)
T ss_dssp -CCEEEEECCSHHH-----HHHHHHHHTSSSEEEEEECCC
T ss_pred cCCEEEEEecCHHH-----HHHHHHHHHCCCcEEEEEcCC
Confidence 46899999877433 455688888999998776643
No 277
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=29.66 E-value=44 Score=28.54 Aligned_cols=34 Identities=9% Similarity=0.091 Sum_probs=24.5
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCc
Q 011789 9 PHAIFISYPLQGHVNPSVQLALKLASQGFTITFVNTHF 46 (477)
Q Consensus 9 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~ 46 (477)
|||++. |+.|.+- ..|+++|.++||+|+.++-..
T Consensus 1 MkilVt--GatG~iG--~~l~~~L~~~g~~V~~~~R~~ 34 (224)
T 3h2s_A 1 MKIAVL--GATGRAG--SAIVAEARRRGHEVLAVVRDP 34 (224)
T ss_dssp CEEEEE--TTTSHHH--HHHHHHHHHTTCEEEEEESCH
T ss_pred CEEEEE--cCCCHHH--HHHHHHHHHCCCEEEEEEecc
Confidence 565554 4445443 578899999999999987654
No 278
>2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A*
Probab=29.16 E-value=55 Score=30.27 Aligned_cols=36 Identities=22% Similarity=0.326 Sum_probs=24.7
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 011789 6 TQKPHAIFISYPLQGHVNPSVQLALKLASQGFTITFVNTH 45 (477)
Q Consensus 6 ~~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 45 (477)
..||+|++. |+.|-+- ..|++.|.++||+|+.+...
T Consensus 25 ~~~~~vlVt--GatG~iG--~~l~~~L~~~g~~V~~~~r~ 60 (343)
T 2b69_A 25 KDRKRILIT--GGAGFVG--SHLTDKLMMDGHEVTVVDNF 60 (343)
T ss_dssp --CCEEEEE--TTTSHHH--HHHHHHHHHTTCEEEEEECC
T ss_pred cCCCEEEEE--cCccHHH--HHHHHHHHHCCCEEEEEeCC
Confidence 456777665 4445443 46789999999999998753
No 279
>1iow_A DD-ligase, DDLB, D-ALA\:D-Ala ligase; glycogen phosphorylase, cell WALL, peptidoglycan synthesis, vancomycin, ADP binding; HET: ADP PHY; 1.90A {Escherichia coli} SCOP: c.30.1.2 d.142.1.1 PDB: 1iov_A* 2dln_A* 3v4z_A*
Probab=29.14 E-value=68 Score=28.97 Aligned_cols=38 Identities=8% Similarity=-0.022 Sum_probs=27.7
Q ss_pred CcEEEEEcCCCc-cCHH---HHHHHHHHHHhCCCeEEEEeCC
Q 011789 8 KPHAIFISYPLQ-GHVN---PSVQLALKLASQGFTITFVNTH 45 (477)
Q Consensus 8 ~~~il~~~~~~~-GH~~---p~l~La~~L~~rGh~Vt~~~~~ 45 (477)
+|||+++..+.. -|-. ....++++|.++||+|.++...
T Consensus 2 ~~~i~il~gg~s~e~~~s~~~~~~l~~al~~~G~~v~~~~~~ 43 (306)
T 1iow_A 2 TDKIAVLLGGTSAEREVSLNSGAAVLAGLREGGIDAYPVDPK 43 (306)
T ss_dssp CCEEEEECCCSSTTHHHHHHHHHHHHHHHHHTTCEEEEECTT
T ss_pred CcEEEEEeCCCCccceEcHHhHHHHHHHHHHCCCeEEEEecC
Confidence 478988876532 2322 3467999999999999988765
No 280
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=29.11 E-value=50 Score=29.88 Aligned_cols=34 Identities=21% Similarity=0.329 Sum_probs=26.7
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 011789 7 QKPHAIFISYPLQGHVNPSVQLALKLASQGFTITFVNTH 45 (477)
Q Consensus 7 ~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 45 (477)
.++||.++-.|..| ..+|..|+++||+|+++...
T Consensus 3 ~~~kV~VIGaG~mG-----~~iA~~la~~G~~V~l~d~~ 36 (283)
T 4e12_A 3 GITNVTVLGTGVLG-----SQIAFQTAFHGFAVTAYDIN 36 (283)
T ss_dssp SCCEEEEECCSHHH-----HHHHHHHHHTTCEEEEECSS
T ss_pred CCCEEEEECCCHHH-----HHHHHHHHhCCCeEEEEeCC
Confidence 36799999776666 46889999999999987543
No 281
>1kjq_A GART 2, phosphoribosylglycinamide formyltransferase 2, 5'-; ATP-grAsp, purine biosynthesis, nucleotide; HET: ADP MPO; 1.05A {Escherichia coli} SCOP: b.84.2.1 c.30.1.1 d.142.1.2 PDB: 1kj9_A* 1kji_A* 1kjj_A* 1kj8_A* 1eyz_A* 1ez1_A*
Probab=29.07 E-value=55 Score=31.01 Aligned_cols=38 Identities=8% Similarity=0.132 Sum_probs=28.3
Q ss_pred CCCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCcc
Q 011789 5 KTQKPHAIFISYPLQGHVNPSVQLALKLASQGFTITFVNTHFI 47 (477)
Q Consensus 5 ~~~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~ 47 (477)
...+|||+++..+ .-...+++++.+.||+|..+.....
T Consensus 8 ~~~~~~ili~g~g-----~~~~~~~~a~~~~G~~v~~~~~~~~ 45 (391)
T 1kjq_A 8 RPAATRVMLLGSG-----ELGKEVAIECQRLGVEVIAVDRYAD 45 (391)
T ss_dssp STTCCEEEEESCS-----HHHHHHHHHHHTTTCEEEEEESSTT
T ss_pred CCCCCEEEEECCC-----HHHHHHHHHHHHcCCEEEEEECCCC
Confidence 3566899999553 2346789999999999988876543
No 282
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=29.05 E-value=68 Score=26.68 Aligned_cols=34 Identities=9% Similarity=0.184 Sum_probs=24.6
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCc
Q 011789 9 PHAIFISYPLQGHVNPSVQLALKLASQGFTITFVNTHF 46 (477)
Q Consensus 9 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~ 46 (477)
|+|+++ |+.|-+- ..|++.|.++||+|+.++...
T Consensus 4 ~~ilVt--GatG~iG--~~l~~~l~~~g~~V~~~~r~~ 37 (206)
T 1hdo_A 4 KKIAIF--GATGQTG--LTTLAQAVQAGYEVTVLVRDS 37 (206)
T ss_dssp CEEEEE--STTSHHH--HHHHHHHHHTTCEEEEEESCG
T ss_pred CEEEEE--cCCcHHH--HHHHHHHHHCCCeEEEEEeCh
Confidence 677665 4455443 567899999999999987643
No 283
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=29.00 E-value=38 Score=31.51 Aligned_cols=36 Identities=19% Similarity=0.309 Sum_probs=27.1
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCc
Q 011789 6 TQKPHAIFISYPLQGHVNPSVQLALKLASQGFTITFVNTHF 46 (477)
Q Consensus 6 ~~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~ 46 (477)
..++||.|+-.|..| ..+|..|+++||+|+++....
T Consensus 4 ~~~~kI~vIGaG~MG-----~~iA~~la~~G~~V~l~d~~~ 39 (319)
T 2dpo_A 4 PAAGDVLIVGSGLVG-----RSWAMLFASGGFRVKLYDIEP 39 (319)
T ss_dssp ---CEEEEECCSHHH-----HHHHHHHHHTTCCEEEECSCH
T ss_pred CCCceEEEEeeCHHH-----HHHHHHHHHCCCEEEEEeCCH
Confidence 356899999888777 467889999999999885543
No 284
>1d4o_A NADP(H) transhydrogenase; nucleotide-binding fold, protein-NADP(H) complex, inverted binding of NADP(H), oxidoreductase; HET: NAP; 1.21A {Bos taurus} SCOP: c.31.1.4
Probab=28.98 E-value=55 Score=27.12 Aligned_cols=40 Identities=18% Similarity=0.037 Sum_probs=30.2
Q ss_pred cEEEEEcCCCc---cCHHHHHHHHHHHHhCCCeEEEEeCCcch
Q 011789 9 PHAIFISYPLQ---GHVNPSVQLALKLASQGFTITFVNTHFIH 48 (477)
Q Consensus 9 ~~il~~~~~~~---GH~~p~l~La~~L~~rGh~Vt~~~~~~~~ 48 (477)
.+|+++|.=+. --.++...|++.|.++|.+|.|..+|-.-
T Consensus 23 ~~ViIvPGYGmAvAqAQ~~v~el~~~L~~~G~~V~faIHPVAG 65 (184)
T 1d4o_A 23 NSIIITPGYGLCAAKAQYPIADLVKMLSEQGKKVRFGIHPVAG 65 (184)
T ss_dssp SEEEEEECHHHHHTTTHHHHHHHHHHHHHTTCEEEEEECTTCS
T ss_pred CeEEEECChHHHHHHHHHHHHHHHHHHHHCCCeEEEEeccccc
Confidence 46777765321 13468899999999999999999988653
No 285
>1txg_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxidoreductase; 1.70A {Archaeoglobus fulgidus} SCOP: a.100.1.6 c.2.1.6
Probab=28.86 E-value=33 Score=31.75 Aligned_cols=31 Identities=16% Similarity=0.188 Sum_probs=25.7
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 011789 9 PHAIFISYPLQGHVNPSVQLALKLASQGFTITFVNT 44 (477)
Q Consensus 9 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 44 (477)
|||.|+-.|..|. .+|..|.++||+|+++..
T Consensus 1 m~I~iiG~G~mG~-----~~a~~L~~~g~~V~~~~r 31 (335)
T 1txg_A 1 MIVSILGAGAMGS-----ALSVPLVDNGNEVRIWGT 31 (335)
T ss_dssp CEEEEESCCHHHH-----HHHHHHHHHCCEEEEECC
T ss_pred CEEEEECcCHHHH-----HHHHHHHhCCCeEEEEEc
Confidence 6899998777774 568889999999999876
No 286
>1sqs_A Conserved hypothetical protein; structural genomics, alpha beta protein, PSI, protein struct initiative; HET: TLA; 1.50A {Streptococcus pneumoniae} SCOP: c.23.5.5 PDB: 2oys_A*
Probab=28.85 E-value=54 Score=28.79 Aligned_cols=36 Identities=11% Similarity=0.092 Sum_probs=25.5
Q ss_pred CcEEEEEcCCCc--cCHHHHHH-HHHHHHhC-CCeEEEEe
Q 011789 8 KPHAIFISYPLQ--GHVNPSVQ-LALKLASQ-GFTITFVN 43 (477)
Q Consensus 8 ~~~il~~~~~~~--GH~~p~l~-La~~L~~r-Gh~Vt~~~ 43 (477)
||||+++..... |+..-++. +++.|.++ |++|.++.
T Consensus 1 MmkIliI~gS~r~~s~T~~la~~i~~~l~~~~g~~v~~~d 40 (242)
T 1sqs_A 1 MNKIFIYAGVRNHNSKTLEYTKRLSSIISSRNNVDISFRT 40 (242)
T ss_dssp CCEEEEEECCCCTTCHHHHHHHHHHHHHHHHSCCEEEEEC
T ss_pred CCeEEEEECCCCCCChHHHHHHHHHHHHHHhcCCeEEEEE
Confidence 678888776554 77666655 46667777 99998874
No 287
>2ywx_A Phosphoribosylaminoimidazole carboxylase catalyti; rossmann fold, structural genomics, NPPSFA; 2.31A {Methanocaldococcus jannaschii}
Probab=28.73 E-value=2.4e+02 Score=22.99 Aligned_cols=132 Identities=11% Similarity=0.130 Sum_probs=70.8
Q ss_pred EEEEecccccCCHHHHHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCchhHHHhcCCCeEEEeeccHHHhhccCCCCccc
Q 011789 285 LYVSFGSYAHVSKRDLIEIANGIAKSKVTFIWILRPDIVSSDDPNPLPEDFKKEVADRSMIITWCCQTSVLAHPAIGGFL 364 (477)
Q Consensus 285 I~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~lp~~~~~~~~~nv~v~~~~p~~~lL~~~~~~~~I 364 (477)
|-|-+||.. +....++....++..|..+-+.+-+. ...|+...+ +.....-+++|
T Consensus 2 V~Iimgs~S--D~~v~~~a~~~l~~~gi~~dv~V~sa-------HR~p~~~~~----------------~~~~a~~~ViI 56 (157)
T 2ywx_A 2 ICIIMGSES--DLKIAEKAVNILKEFGVEFEVRVASA-------HRTPELVEE----------------IVKNSKADVFI 56 (157)
T ss_dssp EEEEESSGG--GHHHHHHHHHHHHHTTCCEEEEECCT-------TTCHHHHHH----------------HHHHCCCSEEE
T ss_pred EEEEEccHH--HHHHHHHHHHHHHHcCCCeEEEEEcc-------cCCHHHHHH----------------HHHhcCCCEEE
Confidence 334456654 46667788888889888866655544 345553321 11111002377
Q ss_pred cccCCchhhHHHhc---CcceeccccccchhhHHH--HHHh--hhccee--eecCCC-CcCHHHHHHHHHHHhcCCchHH
Q 011789 365 THCGWNSVLEGLWC---GVPLLCFPLYTDQFTNRK--LAVD--DWNVGL--NLSNEK-VITKEEVSKNVHLLMGEKSGAK 434 (477)
Q Consensus 365 tHgG~gs~~eal~~---GvP~v~~P~~~DQ~~na~--~v~~--~~G~G~--~~~~~~-~~~~~~l~~~i~~~l~~~~~~~ 434 (477)
.=.|+-.-+-++.+ -+|+|.+|....-..... -+.+ . |+.+ ... + -.++.-+...|. -+.|+ +
T Consensus 57 a~AG~aa~Lpgvva~~t~~PVIgVP~~~~l~G~daLlS~vqmP~-gvpVatV~I--~~~~nAa~lA~~Il-~~~d~---~ 129 (157)
T 2ywx_A 57 AIAGLAAHLPGVVASLTTKPVIAVPVDAKLDGLDALLSSVQMPP-GIPVATVGI--DRGENAAILALEIL-ALKDE---N 129 (157)
T ss_dssp EEEESSCCHHHHHHTTCSSCEEEEEECSSGGGHHHHHHHHSCCT-TSCCEECCT--TCHHHHHHHHHHHH-TTTCH---H
T ss_pred EEcCchhhhHHHHHhccCCCEEEecCCCccCcHHHHHHHhcCCC-CCeeEEEec--CCcHHHHHHHHHHH-hcCCH---H
Confidence 66665433333333 458999998322112222 2333 3 4332 221 2 334444444443 35677 8
Q ss_pred HHHHHHHHHHHHHH
Q 011789 435 YRNAAKQVKKAMEY 448 (477)
Q Consensus 435 ~~~~a~~l~~~~~~ 448 (477)
++++.+..++++++
T Consensus 130 l~~kl~~~r~~~~~ 143 (157)
T 2ywx_A 130 IAKKLIEYREKMKK 143 (157)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH
Confidence 99888888888876
No 288
>3f6p_A Transcriptional regulatory protein YYCF; unphosphorelated, receiver domain, cytoplasm, DNA-binding, phosphoprotein, transcription regulation; 1.95A {Bacillus subtilis} SCOP: c.23.1.1 PDB: 2zwm_A
Probab=28.72 E-value=87 Score=23.26 Aligned_cols=32 Identities=6% Similarity=0.143 Sum_probs=22.0
Q ss_pred CccEEEecCCCc--chHHHHHH----hCCceEEEecch
Q 011789 120 NVHCLIADTYFV--WPSKLAKK----FGLYYISFWTES 151 (477)
Q Consensus 120 ~pD~iI~D~~~~--~~~~~A~~----~gIP~v~~~~~~ 151 (477)
+||+||.|...+ .+..+.+. .++|.+.++...
T Consensus 46 ~~dlii~D~~~p~~~g~~~~~~lr~~~~~~ii~~t~~~ 83 (120)
T 3f6p_A 46 QPDLILLDIMLPNKDGVEVCREVRKKYDMPIIMLTAKD 83 (120)
T ss_dssp CCSEEEEETTSTTTHHHHHHHHHHTTCCSCEEEEEESS
T ss_pred CCCEEEEeCCCCCCCHHHHHHHHHhcCCCCEEEEECCC
Confidence 899999998655 34444443 468888876543
No 289
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=28.66 E-value=19 Score=33.25 Aligned_cols=39 Identities=13% Similarity=0.094 Sum_probs=27.6
Q ss_pred CCCCCCCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 011789 1 MAGNKTQKPHAIFISYPLQGHVNPSVQLALKLASQGFTITFVNT 44 (477)
Q Consensus 1 ~~~~~~~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 44 (477)
|..+...+++|+++-.|.-| +.+|..|+++|++|+++-.
T Consensus 1 M~~~~~~~~~vvIIG~G~aG-----l~~A~~l~~~g~~v~lie~ 39 (333)
T 1vdc_A 1 MNGLETHNTRLCIVGSGPAA-----HTAAIYAARAELKPLLFEG 39 (333)
T ss_dssp ---CEEEEEEEEEECCSHHH-----HHHHHHHHHTTCCCEEECC
T ss_pred CCCCCCCCCCEEEECcCHHH-----HHHHHHHHHCCCeEEEEec
Confidence 44443444688888777555 6778899999999999875
No 290
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=28.64 E-value=54 Score=29.62 Aligned_cols=33 Identities=24% Similarity=0.298 Sum_probs=26.2
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCc
Q 011789 9 PHAIFISYPLQGHVNPSVQLALKLASQGFTITFVNTHF 46 (477)
Q Consensus 9 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~ 46 (477)
|||.|+-.|..| ..+|+.|+++||+|+++....
T Consensus 2 ~~i~iIG~G~mG-----~~~a~~l~~~G~~V~~~dr~~ 34 (287)
T 3pef_A 2 QKFGFIGLGIMG-----SAMAKNLVKAGCSVTIWNRSP 34 (287)
T ss_dssp CEEEEECCSHHH-----HHHHHHHHHTTCEEEEECSSG
T ss_pred CEEEEEeecHHH-----HHHHHHHHHCCCeEEEEcCCH
Confidence 789999777666 457899999999999875443
No 291
>3g17_A Similar to 2-dehydropantoate 2-reductase; structural genomics, putative 2-dehydropantoate 2-reductase, protein structure initiative; 2.30A {Staphylococcus aureus subsp}
Probab=28.64 E-value=19 Score=32.97 Aligned_cols=33 Identities=18% Similarity=0.169 Sum_probs=27.5
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 011789 8 KPHAIFISYPLQGHVNPSVQLALKLASQGFTITFVNTH 45 (477)
Q Consensus 8 ~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 45 (477)
+|||+|+-.|+.|- .+|..|.+.||+|+++...
T Consensus 2 ~mkI~iiGaGa~G~-----~~a~~L~~~g~~V~~~~r~ 34 (294)
T 3g17_A 2 SLSVAIIGPGAVGT-----TIAYELQQSLPHTTLIGRH 34 (294)
T ss_dssp -CCEEEECCSHHHH-----HHHHHHHHHCTTCEEEESS
T ss_pred CcEEEEECCCHHHH-----HHHHHHHHCCCeEEEEEec
Confidence 37999998888885 5788899999999998765
No 292
>2q3e_A UDP-glucose 6-dehydrogenase; hexamer, structural genomics, S genomics consortium, SGC, oxidoreductase; HET: NAD UPG; 2.00A {Homo sapiens} PDB: 2qg4_A* 3khu_A* 3itk_A* 3tdk_A* 3ptz_A* 3prj_A* 3tf5_A
Probab=28.57 E-value=49 Score=32.54 Aligned_cols=35 Identities=14% Similarity=0.086 Sum_probs=27.2
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHhC--CCeEEEEeCC
Q 011789 6 TQKPHAIFISYPLQGHVNPSVQLALKLASQ--GFTITFVNTH 45 (477)
Q Consensus 6 ~~~~~il~~~~~~~GH~~p~l~La~~L~~r--Gh~Vt~~~~~ 45 (477)
..||||.|+-.|..| ..+|..|+++ ||+|+++...
T Consensus 3 ~~~mkI~VIG~G~mG-----~~lA~~La~~g~G~~V~~~d~~ 39 (467)
T 2q3e_A 3 FEIKKICCIGAGYVG-----GPTCSVIAHMCPEIRVTVVDVN 39 (467)
T ss_dssp CCCCEEEEECCSTTH-----HHHHHHHHHHCTTSEEEEECSC
T ss_pred CCccEEEEECCCHHH-----HHHHHHHHhcCCCCEEEEEECC
Confidence 356899999877776 4678888888 8999988543
No 293
>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E
Probab=28.57 E-value=83 Score=27.56 Aligned_cols=43 Identities=16% Similarity=0.090 Sum_probs=29.0
Q ss_pred CCCCCCCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCc
Q 011789 1 MAGNKTQKPHAIFISYPLQGHVNPSVQLALKLASQGFTITFVNTHF 46 (477)
Q Consensus 1 ~~~~~~~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~ 46 (477)
|..+..-..|+++++.++.| =-..+|+.|+++|++|.+.....
T Consensus 1 M~~~~~l~gk~~lVTGas~g---IG~a~a~~l~~~G~~V~~~~r~~ 43 (248)
T 3op4_A 1 MSQFMNLEGKVALVTGASRG---IGKAIAELLAERGAKVIGTATSE 43 (248)
T ss_dssp -CCTTCCTTCEEEESSCSSH---HHHHHHHHHHHTTCEEEEEESSH
T ss_pred CccccCCCCCEEEEeCCCCH---HHHHHHHHHHHCCCEEEEEeCCH
Confidence 44443333477888877654 23578999999999998876543
No 294
>1vco_A CTP synthetase; tetramer, riken structural genomics/proteomics initiative, RSGI, structural genomics, ligase; HET: GLN; 2.15A {Thermus thermophilus} SCOP: c.23.16.1 c.37.1.10 PDB: 1vcn_A 1vcm_A
Probab=28.51 E-value=39 Score=34.06 Aligned_cols=42 Identities=14% Similarity=0.221 Sum_probs=32.4
Q ss_pred CCCcEEEEEcCCCccCH---HHHHHHHHHHHhCCCeEEEEeCCcc
Q 011789 6 TQKPHAIFISYPLQGHV---NPSVQLALKLASQGFTITFVNTHFI 47 (477)
Q Consensus 6 ~~~~~il~~~~~~~GH~---~p~l~La~~L~~rGh~Vt~~~~~~~ 47 (477)
..|+|.+|++.|..+++ .-..+|++.|++||++|+.+=..++
T Consensus 9 ~~~~~~i~v~gg~~s~~gk~~~~~~~~~~l~~~g~~v~~~k~~py 53 (550)
T 1vco_A 9 PRPRKYVFITGGVVSSLGKGILTSSLGALLRARGYRVTAIKIDPY 53 (550)
T ss_dssp -CCCEEEEEEECSSSCSCHHHHHHHHHHHHHTTTCCEEEEEEECS
T ss_pred ccceeEEEEeCCcccCcchHHHHHHHHHHHHhCCceeeEeecccc
Confidence 45778999986655554 5578899999999999999866544
No 295
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}
Probab=28.49 E-value=50 Score=29.13 Aligned_cols=35 Identities=20% Similarity=0.117 Sum_probs=27.1
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCc
Q 011789 7 QKPHAIFISYPLQGHVNPSVQLALKLASQGFTITFVNTHF 46 (477)
Q Consensus 7 ~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~ 46 (477)
.+|||.|+-.|..| ..+|+.|+++||+|++.....
T Consensus 18 ~~~kIgiIG~G~mG-----~alA~~L~~~G~~V~~~~r~~ 52 (245)
T 3dtt_A 18 QGMKIAVLGTGTVG-----RTMAGALADLGHEVTIGTRDP 52 (245)
T ss_dssp -CCEEEEECCSHHH-----HHHHHHHHHTTCEEEEEESCH
T ss_pred CCCeEEEECCCHHH-----HHHHHHHHHCCCEEEEEeCCh
Confidence 46899999777666 357899999999999886543
No 296
>2l2q_A PTS system, cellobiose-specific IIB component (CE; cellobiose-specific phosphotransferase IIB component, struct genomics; NMR {Borrelia burgdorferi}
Probab=28.42 E-value=63 Score=24.41 Aligned_cols=34 Identities=6% Similarity=-0.038 Sum_probs=26.3
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEE
Q 011789 8 KPHAIFISYPLQGHVNPSVQLALKLASQGFTITF 41 (477)
Q Consensus 8 ~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~ 41 (477)
.|||+++|..|.|+-.-.-.+-+.+.++|.++.+
T Consensus 4 ~mkIlvvC~~G~~TSll~~kl~~~~~~~gi~~~i 37 (109)
T 2l2q_A 4 SMNILLVCGAGMSTSMLVQRIEKYAKSKNINATI 37 (109)
T ss_dssp CEEEEEESSSSCSSCHHHHHHHHHHHHHTCSEEE
T ss_pred ceEEEEECCChHhHHHHHHHHHHHHHHCCCCeEE
Confidence 3789999999888885555677777788887554
No 297
>2w36_A Endonuclease V; hypoxanthine, endonuclease, endonucleasev, hydrolase, inosine, DNA damage, DNA repair; HET: BRU; 2.10A {Thermotoga maritima} PDB: 2w35_A 3hd0_A
Probab=28.41 E-value=1.1e+02 Score=26.71 Aligned_cols=29 Identities=10% Similarity=0.006 Sum_probs=22.4
Q ss_pred CCccEEEecCCCcc-------hHHHHHHhCCceEEE
Q 011789 119 ENVHCLIADTYFVW-------PSKLAKKFGLYYISF 147 (477)
Q Consensus 119 ~~pD~iI~D~~~~~-------~~~~A~~~gIP~v~~ 147 (477)
.+||+|++|..... +..+...+|+|+|.+
T Consensus 102 ~~PdlllvDG~Gi~HpR~~GlA~HlGv~l~~PtIGV 137 (225)
T 2w36_A 102 TKPDVVVFDGQGLAHPRKLGIASHMGLFIEIPTIGV 137 (225)
T ss_dssp SCCSEEEEESCSSSSTTSCCHHHHHHHHHTSCEEEE
T ss_pred CCCCEEEEeCeEEEcCCCCCchhhhhhhhCCCEEEE
Confidence 38999999987553 444666779999998
No 298
>2vrn_A Protease I, DR1199; cysteine sulfenic acid, DJ-1/THIJ/PFPI superfamily, protease hydrolase, stress response; 2.15A {Deinococcus radiodurans}
Probab=28.38 E-value=1.2e+02 Score=25.13 Aligned_cols=40 Identities=5% Similarity=-0.098 Sum_probs=30.6
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCc
Q 011789 6 TQKPHAIFISYPLQGHVNPSVQLALKLASQGFTITFVNTHF 46 (477)
Q Consensus 6 ~~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~ 46 (477)
..++||+|+.+++.. ..-+....+.|...|++|++++...
T Consensus 7 ~~~~~v~il~~~g~~-~~e~~~~~~~l~~ag~~v~~vs~~~ 46 (190)
T 2vrn_A 7 LTGKKIAILAADGVE-EIELTSPRAAIEAAGGTTELISLEP 46 (190)
T ss_dssp CTTCEEEEECCTTCB-HHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred CCCCEEEEEeCCCCC-HHHHHHHHHHHHHCCCEEEEEecCC
Confidence 456899999886654 3456666788888999999998764
No 299
>4gi5_A Quinone reductase; protein structure initiative, FAD bound, structural genomics, PSI-biology; HET: FAD; 1.75A {Klebsiella pneumoniae subsp}
Probab=28.08 E-value=87 Score=28.39 Aligned_cols=37 Identities=14% Similarity=0.168 Sum_probs=22.9
Q ss_pred CCCcEEEE-EcCCCccCHHHHH--HHHHHHHhCCCeEEEE
Q 011789 6 TQKPHAIF-ISYPLQGHVNPSV--QLALKLASQGFTITFV 42 (477)
Q Consensus 6 ~~~~~il~-~~~~~~GH~~p~l--~La~~L~~rGh~Vt~~ 42 (477)
..+|||++ +.+|-..-++-.+ .+.+.|.+.||+|+++
T Consensus 20 m~~MKiLII~aHP~~~S~n~aL~~~~~~~l~~~G~eV~v~ 59 (280)
T 4gi5_A 20 FQSMKVLLIYAHPEPRSLNGALKNFAIRHLQQAGHEVQVS 59 (280)
T ss_dssp --CCEEEEEECCSCTTSHHHHHHHHHHHHHHHTTCEEEEE
T ss_pred hhCCeEEEEEeCCCCccHHHHHHHHHHHHHHHCCCeEEEE
Confidence 34566655 4556544444432 4577888999999986
No 300
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=28.04 E-value=45 Score=32.97 Aligned_cols=36 Identities=14% Similarity=0.121 Sum_probs=28.6
Q ss_pred CCCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 011789 5 KTQKPHAIFISYPLQGHVNPSVQLALKLASQGFTITFVNTH 45 (477)
Q Consensus 5 ~~~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 45 (477)
.+.-|||.++-.|..| +.+|..|+++||+|+++-..
T Consensus 5 ~~~~~~I~VIG~G~vG-----~~lA~~la~~G~~V~~~d~~ 40 (478)
T 2y0c_A 5 HHGSMNLTIIGSGSVG-----LVTGACLADIGHDVFCLDVD 40 (478)
T ss_dssp --CCCEEEEECCSHHH-----HHHHHHHHHTTCEEEEECSC
T ss_pred cCCCceEEEECcCHHH-----HHHHHHHHhCCCEEEEEECC
Confidence 4567999999888777 56789999999999998653
No 301
>2hpv_A FMN-dependent NADH-azoreductase; structural genomics, PS protein structure initiative, southeast collaboratory for S genomics, secsg; HET: FMN; 2.00A {Enterococcus faecalis}
Probab=27.98 E-value=54 Score=27.87 Aligned_cols=37 Identities=3% Similarity=0.028 Sum_probs=23.9
Q ss_pred CcEEEEEcCCCc----cCHHHHHH-HHHHHHhCC--CeEEEEeC
Q 011789 8 KPHAIFISYPLQ----GHVNPSVQ-LALKLASQG--FTITFVNT 44 (477)
Q Consensus 8 ~~~il~~~~~~~----GH~~p~l~-La~~L~~rG--h~Vt~~~~ 44 (477)
||||+++....+ |+..-+.. +++.|.++| ++|.++--
T Consensus 1 M~kilii~gS~r~~~~s~t~~la~~~~~~~~~~g~~~~v~~~dL 44 (208)
T 2hpv_A 1 MSKLLVVKAHPLTKEESRSVRALETFLASYRETNPSDEIEILDV 44 (208)
T ss_dssp -CEEEEEECCSSCTTTCHHHHHHHHHHHHHHHHCTTSEEEEEET
T ss_pred CCeEEEEEecCCCCCCCHHHHHHHHHHHHHHHhCCCCeEEEeeC
Confidence 678876665543 66665554 466777777 99888743
No 302
>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*
Probab=27.94 E-value=53 Score=27.92 Aligned_cols=32 Identities=25% Similarity=0.277 Sum_probs=23.7
Q ss_pred cEEEEEc-CCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 011789 9 PHAIFIS-YPLQGHVNPSVQLALKLASQGFTITFVNTH 45 (477)
Q Consensus 9 ~~il~~~-~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 45 (477)
|||+++- .|..| ..+++.|.++||+|+++...
T Consensus 1 m~i~iiGa~G~~G-----~~ia~~l~~~g~~V~~~~r~ 33 (212)
T 1jay_A 1 MRVALLGGTGNLG-----KGLALRLATLGHEIVVGSRR 33 (212)
T ss_dssp CEEEEETTTSHHH-----HHHHHHHHTTTCEEEEEESS
T ss_pred CeEEEEcCCCHHH-----HHHHHHHHHCCCEEEEEeCC
Confidence 5888885 44444 35788999999999987654
No 303
>3f2v_A General stress protein 14; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; HET: FMN; 2.00A {Treponema denticola}
Probab=27.79 E-value=40 Score=28.68 Aligned_cols=36 Identities=8% Similarity=-0.036 Sum_probs=21.1
Q ss_pred CcEEEEEcCCCccC-HHHHHHHHHHHHhCCCeEEEEe
Q 011789 8 KPHAIFISYPLQGH-VNPSVQLALKLASQGFTITFVN 43 (477)
Q Consensus 8 ~~~il~~~~~~~GH-~~p~l~La~~L~~rGh~Vt~~~ 43 (477)
||||+++...-..+ -.-.-.+++.+.+.|++|++.-
T Consensus 1 MmkiLiI~gsp~~~~s~l~~~l~~~~~~~g~ev~~~d 37 (192)
T 3f2v_A 1 MPKTLIILAHPNISQSTVHKHWSDAVRQHTDRFTVHE 37 (192)
T ss_dssp -CCEEEEECCTTGGGCSHHHHHHHHHTTCTTTEEEEE
T ss_pred CCEEEEEEeCCCccHHHHHHHHHHHHHhCCCeEEEEE
Confidence 67887665543332 1234456677777788877754
No 304
>2vzf_A NADH-dependent FMN reductase; oxidoreductase; 2.50A {Edta-degrading bacterium BNC1} PDB: 2vzh_A* 2vzj_A*
Probab=27.67 E-value=57 Score=27.52 Aligned_cols=36 Identities=11% Similarity=-0.015 Sum_probs=25.8
Q ss_pred CcEEEEEcCCC--ccCHHHHHHH-HHH-HHhCCCeEEEEe
Q 011789 8 KPHAIFISYPL--QGHVNPSVQL-ALK-LASQGFTITFVN 43 (477)
Q Consensus 8 ~~~il~~~~~~--~GH~~p~l~L-a~~-L~~rGh~Vt~~~ 43 (477)
||||+++.... .|+..-+... ++. |.++|++|.++-
T Consensus 2 Mmkilii~gS~r~~g~t~~la~~i~~~~l~~~g~~v~~~d 41 (197)
T 2vzf_A 2 TYSIVAISGSPSRNSTTAKLAEYALAHVLARSDSQGRHIH 41 (197)
T ss_dssp CEEEEEEECCSSTTCHHHHHHHHHHHHHHHHSSEEEEEEE
T ss_pred CceEEEEECCCCCCChHHHHHHHHHHHHHHHCCCeEEEEE
Confidence 67888776654 4777766664 566 778899988775
No 305
>2d1p_A TUSD, hypothetical UPF0163 protein YHEN; tRNA modification, sulfur transfer, structural genomics, translation; 2.15A {Escherichia coli} SCOP: c.114.1.1
Probab=27.57 E-value=93 Score=24.81 Aligned_cols=46 Identities=13% Similarity=0.088 Sum_probs=31.6
Q ss_pred CCCcEEEE-EcCCCccCHHH--HHHHHHHHHhCCCeE-EEEeCCcchhhh
Q 011789 6 TQKPHAIF-ISYPLQGHVNP--SVQLALKLASQGFTI-TFVNTHFIHQQM 51 (477)
Q Consensus 6 ~~~~~il~-~~~~~~GH~~p--~l~La~~L~~rGh~V-t~~~~~~~~~~~ 51 (477)
+.-||++| ++.+-+|+-.. .+.+|+.+.+.||+| .++-........
T Consensus 10 ~~~~~~~ivv~~~Pyg~~~a~~Al~~A~aala~g~eV~~VFf~~DGV~~a 59 (140)
T 2d1p_A 10 HGSMRFAIVVTGPAYGTQQASSAFQFAQALIADGHELSSVFFYREGVYNA 59 (140)
T ss_dssp -CCCEEEEEECSCSSSSSHHHHHHHHHHHHHHTTCEEEEEEECGGGGGGG
T ss_pred CCceEEEEEEcCCCCCcHHHHHHHHHHHHHHHCCCccCEEEEechHHHHH
Confidence 34567755 45556676555 567799999999999 887766665554
No 306
>2hna_A Protein MIOC, flavodoxin; alpha-beta sandwich, flavodoxin fold, electron transport; NMR {Escherichia coli} PDB: 2hnb_A
Probab=27.47 E-value=66 Score=25.53 Aligned_cols=36 Identities=28% Similarity=0.279 Sum_probs=27.9
Q ss_pred CcEEEEEcCCCccCHHHHH-HHHHHHHhCCCeEEEEe
Q 011789 8 KPHAIFISYPLQGHVNPSV-QLALKLASQGFTITFVN 43 (477)
Q Consensus 8 ~~~il~~~~~~~GH~~p~l-~La~~L~~rGh~Vt~~~ 43 (477)
||+++++=...+|+..-+. .|++.|.++|++|.++.
T Consensus 1 M~ki~I~Y~S~tGnT~~~A~~ia~~l~~~g~~v~~~~ 37 (147)
T 2hna_A 1 MADITLISGSTLGGAEYVAEHLAEKLEEAGFTTETLH 37 (147)
T ss_dssp CCSEEEECCTTSCCCHHHHHHHHHHHHHTTCCEEEEC
T ss_pred CCeEEEEEECCchHHHHHHHHHHHHHHHCCCceEEec
Confidence 5778777667779988765 56788888999998764
No 307
>3f67_A Putative dienelactone hydrolase; alpha-beta-alpha sandwich, structural genomics, PSI-2, prote structure initiative; 1.74A {Klebsiella pneumoniae subsp}
Probab=27.38 E-value=76 Score=26.84 Aligned_cols=37 Identities=14% Similarity=0.152 Sum_probs=31.0
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 011789 8 KPHAIFISYPLQGHVNPSVQLALKLASQGFTITFVNT 44 (477)
Q Consensus 8 ~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 44 (477)
+..++++.+|..|+-.-+..+++.|+++|+.|...-.
T Consensus 31 ~~p~vv~~HG~~g~~~~~~~~~~~l~~~G~~v~~~d~ 67 (241)
T 3f67_A 31 PLPIVIVVQEIFGVHEHIRDLCRRLAQEGYLAIAPEL 67 (241)
T ss_dssp CEEEEEEECCTTCSCHHHHHHHHHHHHTTCEEEEECT
T ss_pred CCCEEEEEcCcCccCHHHHHHHHHHHHCCcEEEEecc
Confidence 3567888888888888899999999999999887754
No 308
>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}
Probab=27.33 E-value=57 Score=29.89 Aligned_cols=34 Identities=24% Similarity=0.306 Sum_probs=26.8
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 011789 7 QKPHAIFISYPLQGHVNPSVQLALKLASQGFTITFVNTH 45 (477)
Q Consensus 7 ~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 45 (477)
.+|||.|+-.|..|. .+|+.|.+.||+|+++...
T Consensus 29 ~~~~I~iIG~G~mG~-----~~a~~l~~~g~~V~~~~~~ 62 (316)
T 2uyy_A 29 TDKKIGFLGLGLMGS-----GIVSNLLKMGHTVTVWNRT 62 (316)
T ss_dssp CSSCEEEECCSHHHH-----HHHHHHHHTTCCEEEECSS
T ss_pred CCCeEEEEcccHHHH-----HHHHHHHhCCCEEEEEeCC
Confidence 358999998877774 4788899999999887543
No 309
>3k9g_A PF-32 protein; ssgcid, SBRI, decode biostructures, UW, NIH, niaid, borellia burgdorferi, plasmid partition protein, iodide; 2.25A {Borrelia burgdorferi} PDB: 3k9h_A
Probab=27.19 E-value=58 Score=28.91 Aligned_cols=41 Identities=20% Similarity=0.256 Sum_probs=30.8
Q ss_pred CCCcEEEEEcC--CCccCHHHHHHHHHHHHhCCCeEEEEeCCcc
Q 011789 6 TQKPHAIFISY--PLQGHVNPSVQLALKLASQGFTITFVNTHFI 47 (477)
Q Consensus 6 ~~~~~il~~~~--~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~ 47 (477)
..+++++.+.. |+.|=.--.+.||..|+ +|++|.++-....
T Consensus 24 ~~~~~vI~v~s~kGGvGKTT~a~~LA~~la-~g~~VlliD~D~~ 66 (267)
T 3k9g_A 24 NKKPKIITIASIKGGVGKSTSAIILATLLS-KNNKVLLIDMDTQ 66 (267)
T ss_dssp --CCEEEEECCSSSSSCHHHHHHHHHHHHT-TTSCEEEEEECTT
T ss_pred CCCCeEEEEEeCCCCchHHHHHHHHHHHHH-CCCCEEEEECCCC
Confidence 35567766654 57788888999999999 9999999865543
No 310
>1evy_A Glycerol-3-phosphate dehydrogenase; rossmann fold, oxidoreductase; HET: MYS; 1.75A {Leishmania mexicana} SCOP: a.100.1.6 c.2.1.6 PDB: 1evz_A* 1jdj_A* 1m66_A* 1m67_A* 1n1e_A* 1n1g_A*
Probab=27.15 E-value=36 Score=32.16 Aligned_cols=33 Identities=15% Similarity=0.127 Sum_probs=27.1
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCc
Q 011789 9 PHAIFISYPLQGHVNPSVQLALKLASQGFTITFVNTHF 46 (477)
Q Consensus 9 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~ 46 (477)
|||.|+-.|..|. .+|..|+++||+|+++....
T Consensus 16 ~kI~iIG~G~mG~-----~la~~L~~~G~~V~~~~r~~ 48 (366)
T 1evy_A 16 NKAVVFGSGAFGT-----ALAMVLSKKCREVCVWHMNE 48 (366)
T ss_dssp EEEEEECCSHHHH-----HHHHHHTTTEEEEEEECSCH
T ss_pred CeEEEECCCHHHH-----HHHHHHHhCCCEEEEEECCH
Confidence 3999998887774 57899999999999986543
No 311
>2o1e_A YCDH; alpha-beta protein, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.60A {Bacillus subtilis}
Probab=26.78 E-value=1.7e+02 Score=26.89 Aligned_cols=41 Identities=12% Similarity=0.033 Sum_probs=31.2
Q ss_pred HHHHHHHHhHhcCCCccEEEecCCCc--chHHHHHHhCCceEEEe
Q 011789 106 HAEEVIGQIVRSGENVHCLIADTYFV--WPSKLAKKFGLYYISFW 148 (477)
Q Consensus 106 ~~~~ll~~~~~~~~~pD~iI~D~~~~--~~~~~A~~~gIP~v~~~ 148 (477)
.+.++++.+++. +..+|+++.... .+-.+|+..|++.+.+.
T Consensus 227 ~l~~l~~~ik~~--~v~~If~e~~~~~~~~~~ia~e~g~~v~~l~ 269 (312)
T 2o1e_A 227 SLAKLKTYAKEH--NVKVIYFEEIASSKVADTLASEIGAKTEVLN 269 (312)
T ss_dssp HHHHHHHHTTSS--CCCEEECSSCCCHHHHHHHHHHTCCEEECCC
T ss_pred HHHHHHHHHHHc--CCCEEEEeCCCChHHHHHHHHHhCCcEEEec
Confidence 355566666664 899999998766 46779999999987653
No 312
>3rpe_A MDAB, modulator of drug activity B; structural genomics, center for structural genomics of infec diseases, csgid, flavodoxin-like fold; HET: FAD; 1.10A {Yersinia pestis}
Probab=26.77 E-value=68 Score=27.89 Aligned_cols=39 Identities=15% Similarity=0.135 Sum_probs=23.0
Q ss_pred CCCcEEEEEcC-CCc----cCHHH-HH-HHHHHHHhCCCeEEEEeC
Q 011789 6 TQKPHAIFISY-PLQ----GHVNP-SV-QLALKLASQGFTITFVNT 44 (477)
Q Consensus 6 ~~~~~il~~~~-~~~----GH~~p-~l-~La~~L~~rGh~Vt~~~~ 44 (477)
..||||+++.. |-. |-++- ++ .+++.|.+.||+|.+.-.
T Consensus 23 ~~M~kiLiI~gsp~~~~s~~s~n~~L~~~~~~~l~~~g~ev~~~dL 68 (218)
T 3rpe_A 23 NAMSNVLIINAMKEFAHSKGALNLTLTNVAADFLRESGHQVKITTV 68 (218)
T ss_dssp -CCCCEEEEECCCCBTTBCSHHHHHHHHHHHHHHHHTTCCEEEEEG
T ss_pred ccCcceEEEEeCCCcccCCChHHHHHHHHHHHHHhhCCCEEEEEEC
Confidence 46888877664 432 33443 33 345566678999987543
No 313
>1u0t_A Inorganic polyphosphate/ATP-NAD kinase; alpha-beta, beta sandwich, structural genomics, PSI, protein structure initiative; 2.30A {Mycobacterium tuberculosis} SCOP: e.52.1.1 PDB: 1u0r_A 1y3i_A* 1y3h_A
Probab=26.75 E-value=58 Score=29.95 Aligned_cols=37 Identities=3% Similarity=0.118 Sum_probs=29.1
Q ss_pred CcEEEEEcCCCccCHHH-HHHHHHHHHhCCCeEEEEeC
Q 011789 8 KPHAIFISYPLQGHVNP-SVQLALKLASQGFTITFVNT 44 (477)
Q Consensus 8 ~~~il~~~~~~~GH~~p-~l~La~~L~~rGh~Vt~~~~ 44 (477)
|+||+++..+..++... ...+.+.|.++|++|.+...
T Consensus 4 m~ki~iI~n~~~~~~~~~~~~l~~~L~~~g~~v~~~~~ 41 (307)
T 1u0t_A 4 HRSVLLVVHTGRDEATETARRVEKVLGDNKIALRVLSA 41 (307)
T ss_dssp -CEEEEEESSSGGGGSHHHHHHHHHHHTTTCEEEEEC-
T ss_pred CCEEEEEEeCCCHHHHHHHHHHHHHHHHCCCEEEEecc
Confidence 67999999998887644 66788999999999887543
No 314
>3lp8_A Phosphoribosylamine-glycine ligase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ALS collaborative crystallography; 2.15A {Ehrlichia chaffeensis}
Probab=26.71 E-value=87 Score=30.45 Aligned_cols=27 Identities=7% Similarity=0.102 Sum_probs=20.2
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHhCCC
Q 011789 6 TQKPHAIFISYPLQGHVNPSVQLALKLASQGF 37 (477)
Q Consensus 6 ~~~~~il~~~~~~~GH~~p~l~La~~L~~rGh 37 (477)
+.+|||+++-.+++.| +|++.|.+.+.
T Consensus 19 p~~m~ilvlG~ggre~-----ala~~l~~s~~ 45 (442)
T 3lp8_A 19 PGSMNVLVIGSGGREH-----SMLHHIRKSTL 45 (442)
T ss_dssp -CCEEEEEEECSHHHH-----HHHHHHTTCTT
T ss_pred CCCCEEEEECCChHHH-----HHHHHHHhCCC
Confidence 3558999998885544 58999998864
No 315
>1weh_A Conserved hypothetical protein TT1887; rossman fold, structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.80A {Thermus thermophilus} SCOP: c.129.1.1
Probab=26.68 E-value=63 Score=26.84 Aligned_cols=44 Identities=11% Similarity=-0.032 Sum_probs=32.8
Q ss_pred CcEEEEEcCCCcc----CHHHHHHHHHHHHhCCCeEEEEeCCcchhhh
Q 011789 8 KPHAIFISYPLQG----HVNPSVQLALKLASQGFTITFVNTHFIHQQM 51 (477)
Q Consensus 8 ~~~il~~~~~~~G----H~~p~l~La~~L~~rGh~Vt~~~~~~~~~~~ 51 (477)
|+.|.+++....+ +..-...|++.|+++|+.|..-..+.....+
T Consensus 1 m~~V~V~gs~~~~~~~~~~~~A~~lg~~La~~g~~lV~Ggg~GiM~aa 48 (171)
T 1weh_A 1 MRLLAVFVSSRLSPEDPLYARWVRYGEVLAEEGFGLACGGYQGGMEAL 48 (171)
T ss_dssp CEEEEEECCSSCCTTSHHHHHHHHHHHHHHHTTEEEEECCSSTHHHHH
T ss_pred CCEEEEEeCCCCCCCcHHHHHHHHHHHHHHHCCCEEEeCChhhHHHHH
Confidence 4568888876654 4667888999999999888887776554444
No 316
>1t35_A Hypothetical protein YVDD, putative lysine decarboxylase; structural genomics target, NYSGXRC, PSI, protein structure initiative; 2.72A {Bacillus subtilis} SCOP: c.129.1.1
Probab=26.67 E-value=80 Score=26.75 Aligned_cols=44 Identities=11% Similarity=0.155 Sum_probs=31.2
Q ss_pred CcEEEEEcCCCcc----CHHHHHHHHHHHHhCCCeEEEEeCC-cchhhh
Q 011789 8 KPHAIFISYPLQG----HVNPSVQLALKLASQGFTITFVNTH-FIHQQM 51 (477)
Q Consensus 8 ~~~il~~~~~~~G----H~~p~l~La~~L~~rGh~Vt~~~~~-~~~~~~ 51 (477)
|++|.+++....| +..-...|++.|+++|+.|.+-..+ .....+
T Consensus 1 m~~V~V~gss~~~~~~~~~~~A~~lg~~La~~g~~lV~GGg~~GiM~aa 49 (191)
T 1t35_A 1 MKTICVFAGSNPGGNEAYKRKAAELGVYMAEQGIGLVYGGSRVGLMGTI 49 (191)
T ss_dssp CCEEEEECCSSCCSSTHHHHHHHHHHHHHHHTTCEEEECCCCSHHHHHH
T ss_pred CCEEEEEECCCCCCChHHHHHHHHHHHHHHHCCCEEEECCCcccHHHHH
Confidence 4578888877643 3456778899999999998776655 444444
No 317
>2fsv_C NAD(P) transhydrogenase subunit beta; NAD(P) transhydrogenase subunits, oxidoreductas; HET: NAD NAP; 2.30A {Rhodospirillum rubrum} SCOP: c.31.1.4 PDB: 1e3t_A* 1hzz_C* 1nm5_C* 1u28_C* 1u2d_C* 1u2g_C* 2fr8_C* 2frd_C*
Probab=26.66 E-value=62 Score=27.35 Aligned_cols=40 Identities=10% Similarity=0.068 Sum_probs=30.1
Q ss_pred cEEEEEcCCCc---cCHHHHHHHHHHHHhCCCeEEEEeCCcch
Q 011789 9 PHAIFISYPLQ---GHVNPSVQLALKLASQGFTITFVNTHFIH 48 (477)
Q Consensus 9 ~~il~~~~~~~---GH~~p~l~La~~L~~rGh~Vt~~~~~~~~ 48 (477)
.+|+++|.-+. --.++.-.|++.|.++|.+|.|..+|-.-
T Consensus 47 ~~ViIVPGYGmAVAqAQ~~v~el~~~L~~~G~~V~faIHPVAG 89 (203)
T 2fsv_C 47 SKVIIVPGYGMAVAQAQHALREMADVLKKEGVEVSYAIHPVAG 89 (203)
T ss_dssp SEEEEEECHHHHHHTCHHHHHHHHHHHHHTTCEEEEEECTTCS
T ss_pred CcEEEEcCchHhHHHHHHHHHHHHHHHHHcCCeEEEEeccccc
Confidence 46777765321 13467889999999999999999988653
No 318
>2jk1_A HUPR, hydrogenase transcriptional regulatory protein HU; nucleotide-binding, transcription regulation; 2.10A {Rhodobacter capsulatus} PDB: 2vui_B 2vuh_B
Probab=26.58 E-value=1.4e+02 Score=22.78 Aligned_cols=47 Identities=13% Similarity=0.006 Sum_probs=29.1
Q ss_pred cCcceeccccccchhhHHHHHHhhhcc-eeeecCCCCcCHHHHHHHHHHHhc
Q 011789 378 CGVPLLCFPLYTDQFTNRKLAVDDWNV-GLNLSNEKVITKEEVSKNVHLLMG 428 (477)
Q Consensus 378 ~GvP~v~~P~~~DQ~~na~~v~~~~G~-G~~~~~~~~~~~~~l~~~i~~~l~ 428 (477)
..+|+|++--..|.......+... |+ +... +.++.++|..+|+.++.
T Consensus 71 ~~~~ii~~s~~~~~~~~~~~~~~~-ga~~~l~---KP~~~~~L~~~i~~~~~ 118 (139)
T 2jk1_A 71 PETVRIIITGYTDSASMMAAINDA-GIHQFLT---KPWHPEQLLSSARNAAR 118 (139)
T ss_dssp TTSEEEEEESCTTCHHHHHHHHHT-TCCEEEE---SSCCHHHHHHHHHHHHH
T ss_pred CCCcEEEEeCCCChHHHHHHHHhh-chhhhcc---CCCCHHHHHHHHHHHHH
Confidence 356777664444433333334444 45 4444 57899999999998874
No 319
>3of5_A Dethiobiotin synthetase; structural genomics, center for structural genomics of infec diseases, csgid, ligase; 1.52A {Francisella tularensis subsp}
Probab=26.57 E-value=74 Score=27.75 Aligned_cols=34 Identities=18% Similarity=0.059 Sum_probs=27.0
Q ss_pred cEEEEEcC--CCccCHHHHHHHHHHHHhCCCeEEEE
Q 011789 9 PHAIFISY--PLQGHVNPSVQLALKLASQGFTITFV 42 (477)
Q Consensus 9 ~~il~~~~--~~~GH~~p~l~La~~L~~rGh~Vt~~ 42 (477)
||.+|++. .+-|=..-.+.|++.|+++|++|.++
T Consensus 4 mk~i~Itgt~t~vGKT~vt~~L~~~l~~~G~~V~~~ 39 (228)
T 3of5_A 4 MKKFFIIGTDTEVGKTYISTKLIEVCEHQNIKSLCL 39 (228)
T ss_dssp CEEEEEEESSSSSCHHHHHHHHHHHHHHTTCCEEEE
T ss_pred CcEEEEEeCCCCCCHHHHHHHHHHHHHHCCCeeEEe
Confidence 45444444 36688889999999999999999995
No 320
>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}
Probab=26.46 E-value=41 Score=29.29 Aligned_cols=36 Identities=14% Similarity=0.170 Sum_probs=23.5
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhCC-CeEEEEeCCc
Q 011789 8 KPHAIFISYPLQGHVNPSVQLALKLASQG-FTITFVNTHF 46 (477)
Q Consensus 8 ~~~il~~~~~~~GH~~p~l~La~~L~~rG-h~Vt~~~~~~ 46 (477)
||+.++++.+ .|-+- ..|++.|.++| |+|+.+.-..
T Consensus 22 ~mk~vlVtGa-tG~iG--~~l~~~L~~~G~~~V~~~~R~~ 58 (236)
T 3qvo_A 22 HMKNVLILGA-GGQIA--RHVINQLADKQTIKQTLFARQP 58 (236)
T ss_dssp CCEEEEEETT-TSHHH--HHHHHHHTTCTTEEEEEEESSG
T ss_pred cccEEEEEeC-CcHHH--HHHHHHHHhCCCceEEEEEcCh
Confidence 3454445443 33332 57889999999 9999887543
No 321
>4grd_A N5-CAIR mutase, phosphoribosylaminoimidazole carboxylase catalyti; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures; 1.85A {Burkholderia cenocepacia}
Probab=26.45 E-value=2.8e+02 Score=22.99 Aligned_cols=143 Identities=13% Similarity=0.114 Sum_probs=75.6
Q ss_pred CCcEEEEEecccccCCHHHHHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCchhHHHhcCCCeEEEeeccHHHhhccCCC
Q 011789 281 KGSVLYVSFGSYAHVSKRDLIEIANGIAKSKVTFIWILRPDIVSSDDPNPLPEDFKKEVADRSMIITWCCQTSVLAHPAI 360 (477)
Q Consensus 281 ~~~~I~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~lp~~~~~~~~~nv~v~~~~p~~~lL~~~~~ 360 (477)
+.|.|-|-+||.. +....++....++..|..+-+.+-+. ...|+...+- + .-.....+
T Consensus 11 ~~P~V~IimGS~S--D~~v~~~a~~~l~~~gi~~ev~V~sa-------HR~p~~l~~~----------~---~~a~~~g~ 68 (173)
T 4grd_A 11 SAPLVGVLMGSSS--DWDVMKHAVAILQEFGVPYEAKVVSA-------HRMPDEMFDY----------A---EKARERGL 68 (173)
T ss_dssp SSCSEEEEESSGG--GHHHHHHHHHHHHHTTCCEEEEECCT-------TTSHHHHHHH----------H---HHHTTTTC
T ss_pred CCCeEEEEeCcHh--HHHHHHHHHHHHHHcCCCEEEEEEcc-------ccCHHHHHHH----------H---HHHHhcCC
Confidence 3456777788876 46667888888999998876666544 3456533211 0 00111233
Q ss_pred CccccccCCchhhHH---HhcCcceecccccc---chhhHHHHHHhhh-cceeee--cCCC-CcCHHHHHHHHHHHhcCC
Q 011789 361 GGFLTHCGWNSVLEG---LWCGVPLLCFPLYT---DQFTNRKLAVDDW-NVGLNL--SNEK-VITKEEVSKNVHLLMGEK 430 (477)
Q Consensus 361 ~~~ItHgG~gs~~ea---l~~GvP~v~~P~~~---DQ~~na~~v~~~~-G~G~~~--~~~~-~~~~~~l~~~i~~~l~~~ 430 (477)
+++|.=.|+-.-+-+ -..-+|+|.+|... +-.+--..+.+.- |+.+.. ...+ -.++.-++..| -.+.|+
T Consensus 69 ~ViIa~AG~aahLpgvvA~~t~~PVIgVPv~~~~l~G~dsLlSivqMP~Gvpvatv~i~~~~a~NAallA~~I-La~~d~ 147 (173)
T 4grd_A 69 RAIIAGAGGAAHLPGMLAAKTTVPVLGVPVASKYLKGVDSLHSIVQMPKGVPVATFAIGEAGAANAALFAVSI-LSGNSV 147 (173)
T ss_dssp SEEEEEEESSCCHHHHHHHHCCSCEEEEEECCTTTTTHHHHHHHHCCCTTSCCEECCSSHHHHHHHHHHHHHH-HTTSCH
T ss_pred eEEEEeccccccchhhheecCCCCEEEEEcCCCCCCchhHHHHHHhCCCCCCceEEecCCcchHHHHHHHHHH-HcCCCH
Confidence 346665554322222 24467999999743 3333333333330 333222 1000 11223233222 125678
Q ss_pred chHHHHHHHHHHHHHHHHH
Q 011789 431 SGAKYRNAAKQVKKAMEYA 449 (477)
Q Consensus 431 ~~~~~~~~a~~l~~~~~~~ 449 (477)
+++++.++.++++++.
T Consensus 148 ---~l~~kl~~~r~~~~~~ 163 (173)
T 4grd_A 148 ---DYANRLAAFRVRQNEA 163 (173)
T ss_dssp ---HHHHHHHHHHHHHHHH
T ss_pred ---HHHHHHHHHHHHHHHH
Confidence 8999998888888764
No 322
>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}
Probab=26.33 E-value=3e+02 Score=24.45 Aligned_cols=35 Identities=23% Similarity=0.201 Sum_probs=26.3
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCc
Q 011789 9 PHAIFISYPLQGHVNPSVQLALKLASQGFTITFVNTHF 46 (477)
Q Consensus 9 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~ 46 (477)
.|+++++.++.| =-..+|++|+++|++|.++....
T Consensus 28 ~k~~lVTGas~G---IG~aia~~la~~G~~V~~~~r~~ 62 (283)
T 3v8b_A 28 SPVALITGAGSG---IGRATALALAADGVTVGALGRTR 62 (283)
T ss_dssp CCEEEEESCSSH---HHHHHHHHHHHTTCEEEEEESSH
T ss_pred CCEEEEECCCCH---HHHHHHHHHHHCCCEEEEEeCCH
Confidence 367788777654 23578999999999999887544
No 323
>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*
Probab=26.20 E-value=44 Score=31.22 Aligned_cols=38 Identities=8% Similarity=0.099 Sum_probs=27.8
Q ss_pred CCCCCcEEEEEcCCCccCHHHHHHHHHHHHhCCC-eEEEEeCCc
Q 011789 4 NKTQKPHAIFISYPLQGHVNPSVQLALKLASQGF-TITFVNTHF 46 (477)
Q Consensus 4 ~~~~~~~il~~~~~~~GH~~p~l~La~~L~~rGh-~Vt~~~~~~ 46 (477)
|...+|||.++-.|..|.. ||..|+..|| +|+++-...
T Consensus 5 ~~~~~~kI~VIGaG~vG~~-----lA~~la~~g~~~V~L~D~~~ 43 (331)
T 1pzg_A 5 LVQRRKKVAMIGSGMIGGT-----MGYLCALRELADVVLYDVVK 43 (331)
T ss_dssp CCSCCCEEEEECCSHHHHH-----HHHHHHHHTCCEEEEECSSS
T ss_pred cCCCCCEEEEECCCHHHHH-----HHHHHHhCCCCeEEEEECCh
Confidence 4455689999976555543 8888999999 988876543
No 324
>3qrx_B Melittin; calcium-binding, EF-hand, cell division, calcium binding, ME binding protein-toxin complex; 2.20A {Chlamydomonas reinhardtii} PDB: 1bh1_A 2mlt_A
Probab=26.17 E-value=19 Score=19.05 Aligned_cols=17 Identities=41% Similarity=0.575 Sum_probs=14.2
Q ss_pred CCchhhHHHhcCcceec
Q 011789 368 GWNSVLEGLWCGVPLLC 384 (477)
Q Consensus 368 G~gs~~eal~~GvP~v~ 384 (477)
|.|++...+..|.|.++
T Consensus 1 giGa~LKVLa~~LP~li 17 (26)
T 3qrx_B 1 GIGAVLKVLTTGLPALI 17 (26)
T ss_pred CchHHHHHHHccchHHH
Confidence 67888889999998765
No 325
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=26.14 E-value=40 Score=31.94 Aligned_cols=34 Identities=15% Similarity=0.173 Sum_probs=26.7
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 011789 7 QKPHAIFISYPLQGHVNPSVQLALKLASQGFTITFVNTH 45 (477)
Q Consensus 7 ~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 45 (477)
.+|||.|+-.|..| ..+|+.|+++||+|+++...
T Consensus 21 ~~mkIgiIGlG~mG-----~~~A~~L~~~G~~V~v~dr~ 54 (358)
T 4e21_A 21 QSMQIGMIGLGRMG-----ADMVRRLRKGGHECVVYDLN 54 (358)
T ss_dssp -CCEEEEECCSHHH-----HHHHHHHHHTTCEEEEECSC
T ss_pred cCCEEEEECchHHH-----HHHHHHHHhCCCEEEEEeCC
Confidence 34899999777666 46789999999999988644
No 326
>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum}
Probab=26.08 E-value=68 Score=28.18 Aligned_cols=38 Identities=5% Similarity=0.027 Sum_probs=26.5
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCc
Q 011789 6 TQKPHAIFISYPLQGHVNPSVQLALKLASQGFTITFVNTHF 46 (477)
Q Consensus 6 ~~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~ 46 (477)
..|.|.++++.++.| =-..+++.|+++|++|.++....
T Consensus 19 ~~m~k~vlITGas~g---IG~~la~~l~~~G~~V~~~~r~~ 56 (251)
T 3orf_A 19 SHMSKNILVLGGSGA---LGAEVVKFFKSKSWNTISIDFRE 56 (251)
T ss_dssp ---CCEEEEETTTSH---HHHHHHHHHHHTTCEEEEEESSC
T ss_pred cccCCEEEEECCCCH---HHHHHHHHHHHCCCEEEEEeCCc
Confidence 456678888877653 23588999999999998876543
No 327
>1djl_A Transhydrogenase DIII; rossmann fold dinucleotide binding fold reverse binding of N oxidoreductase; HET: NAP; 2.00A {Homo sapiens} SCOP: c.31.1.4 PDB: 1pt9_A* 1u31_A*
Probab=25.93 E-value=65 Score=27.33 Aligned_cols=40 Identities=18% Similarity=0.032 Sum_probs=30.1
Q ss_pred cEEEEEcCCCc---cCHHHHHHHHHHHHhCCCeEEEEeCCcch
Q 011789 9 PHAIFISYPLQ---GHVNPSVQLALKLASQGFTITFVNTHFIH 48 (477)
Q Consensus 9 ~~il~~~~~~~---GH~~p~l~La~~L~~rGh~Vt~~~~~~~~ 48 (477)
.+|+++|.-+. =-.++.-.|++.|.++|.+|.|..+|-.-
T Consensus 46 ~~ViIVPGYGmAVAqAQ~~v~el~~~L~~~G~~V~faIHPVAG 88 (207)
T 1djl_A 46 NSIIITPGYGLCAAKAQYPIADLVKMLTEQGKKVRFGIHPVAG 88 (207)
T ss_dssp SEEEEEECHHHHHHTCHHHHHHHHHHHHHTTCEEEEEECTTCS
T ss_pred CeEEEECCchHHHHHHhHHHHHHHHHHHHCCCeEEEEeCccCC
Confidence 46777765321 13467889999999999999999988653
No 328
>3bul_A Methionine synthase; transferase, reactivation conformation, cobalamin, intermodular interactions, amino-acid biosynthesis, cobalt; HET: B12; 2.30A {Escherichia coli} SCOP: a.46.1.1 c.23.6.1 d.173.1.1 PDB: 3iv9_A* 3iva_A* 1k7y_A* 1k98_A* 1bmt_A*
Probab=25.93 E-value=72 Score=32.32 Aligned_cols=45 Identities=7% Similarity=0.042 Sum_probs=39.3
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCcchhhh
Q 011789 7 QKPHAIFISYPLQGHVNPSVQLALKLASQGFTITFVNTHFIHQQM 51 (477)
Q Consensus 7 ~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~~ 51 (477)
...+|++.+.++..|-....-++..|..+|++|.+++...-.+.+
T Consensus 97 ~~~kVLlatv~GD~HdiG~~iva~~L~~~G~eVi~LG~~vP~e~i 141 (579)
T 3bul_A 97 TNGKMVIATVKGDVHDIGKNIVGVVLQCNNYEIVDLGVMVPAEKI 141 (579)
T ss_dssp CSCEEEEEEBTTCCCCHHHHHHHHHHHTTTCEEEECCSSBCHHHH
T ss_pred CCCeEEEEECCCCCchHHHHHHHHHHHHCCCEEEECCCCCCHHHH
Confidence 467999999999999999999999999999999998776655444
No 329
>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}
Probab=25.93 E-value=48 Score=28.27 Aligned_cols=34 Identities=15% Similarity=0.174 Sum_probs=24.4
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCc
Q 011789 9 PHAIFISYPLQGHVNPSVQLALKLASQGFTITFVNTHF 46 (477)
Q Consensus 9 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~ 46 (477)
|||++. |+.|-+- ..|+++|.++||+|+.++-..
T Consensus 1 M~ilIt--GatG~iG--~~l~~~L~~~g~~V~~~~R~~ 34 (219)
T 3dqp_A 1 MKIFIV--GSTGRVG--KSLLKSLSTTDYQIYAGARKV 34 (219)
T ss_dssp CEEEEE--STTSHHH--HHHHHHHTTSSCEEEEEESSG
T ss_pred CeEEEE--CCCCHHH--HHHHHHHHHCCCEEEEEECCc
Confidence 576655 3444443 578999999999999987654
No 330
>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A*
Probab=25.89 E-value=68 Score=28.57 Aligned_cols=32 Identities=22% Similarity=0.317 Sum_probs=24.4
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 011789 10 HAIFISYPLQGHVNPSVQLALKLASQGFTITFVNT 44 (477)
Q Consensus 10 ~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 44 (477)
|.++++.++.| + -..+++.|+++|++|+++..
T Consensus 12 k~~lVTGas~g-I--G~~ia~~l~~~G~~V~~~~r 43 (276)
T 1mxh_A 12 PAAVITGGARR-I--GHSIAVRLHQQGFRVVVHYR 43 (276)
T ss_dssp CEEEETTCSSH-H--HHHHHHHHHHTTCEEEEEES
T ss_pred CEEEEeCCCcH-H--HHHHHHHHHHCCCEEEEEeC
Confidence 56777766654 2 35789999999999998875
No 331
>3czc_A RMPB; alpha/beta sandwich, phosphotransferase system, transferase, transport; 2.02A {Streptococcus mutans}
Probab=25.87 E-value=75 Score=24.04 Aligned_cols=36 Identities=11% Similarity=-0.041 Sum_probs=28.5
Q ss_pred CCCcEEEEEcCCCccCHHHHH-HHHHHHHhCCCe-EEE
Q 011789 6 TQKPHAIFISYPLQGHVNPSV-QLALKLASQGFT-ITF 41 (477)
Q Consensus 6 ~~~~~il~~~~~~~GH~~p~l-~La~~L~~rGh~-Vt~ 41 (477)
..|+||+++|..+.|.-.-.. .|-+.+.++|.+ +.+
T Consensus 16 ~~~~kIlvvC~sG~gTS~m~~~kl~~~~~~~gi~~~~i 53 (110)
T 3czc_A 16 GSMVKVLTACGNGMGSSMVIKMKVENALRQLGVSDIES 53 (110)
T ss_dssp --CEEEEEECCCCHHHHHHHHHHHHHHHHHTTCCCEEE
T ss_pred cCCcEEEEECCCcHHHHHHHHHHHHHHHHHcCCCeEEE
Confidence 356899999999999988777 777888889987 554
No 332
>3ehd_A Uncharacterized conserved protein; PSI,MCSG,PF05014, structural genomics, protein structure INI midwest center for structural genomics; HET: MSE; 2.15A {Enterococcus faecalis}
Probab=25.82 E-value=1.5e+02 Score=24.35 Aligned_cols=39 Identities=13% Similarity=0.036 Sum_probs=24.9
Q ss_pred CCCcEEEEEcCC-CccCHHHHHHHHHHHHhCCCeEEEEeC
Q 011789 6 TQKPHAIFISYP-LQGHVNPSVQLALKLASQGFTITFVNT 44 (477)
Q Consensus 6 ~~~~~il~~~~~-~~GH~~p~l~La~~L~~rGh~Vt~~~~ 44 (477)
..||||-+.... +.....-...+.++|.++.+.+.++.+
T Consensus 2 ~~M~kIYLAGP~Fs~~q~~~~~~l~~~L~~~~~g~~v~~P 41 (162)
T 3ehd_A 2 NAMTKIYFAGPLFSQADLRYNAYLVEQIRQLDKTIDLYLP 41 (162)
T ss_dssp --CEEEEEESCCSSHHHHHHHHHHHHHHHTTCTTEEEECG
T ss_pred CCccEEEEECCCCCHHHHHHHHHHHHHHHhcCCCCEEECC
Confidence 468888776554 556666677789999887444554444
No 333
>3zzm_A Bifunctional purine biosynthesis protein PURH; transferase, hydrolase; HET: JLN; 2.20A {Mycobacterium tuberculosis} PDB: 4a1o_A*
Probab=25.81 E-value=1.4e+02 Score=29.50 Aligned_cols=42 Identities=21% Similarity=0.169 Sum_probs=28.6
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCcchhhh-ccC
Q 011789 8 KPHAIFISYPLQGHVNPSVQLALKLASQGFTITFVNTHFIHQQM-TKA 54 (477)
Q Consensus 8 ~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~~-~~g 54 (477)
+||-+|++. .+=.-++.+|+.|.+.|.++. ++......+ ..|
T Consensus 9 ~i~~aLISV---sDK~glvelAk~L~~lGfeI~--ATgGTak~L~e~G 51 (523)
T 3zzm_A 9 PIRRALISV---YDKTGLVDLAQGLSAAGVEII--STGSTAKTIADTG 51 (523)
T ss_dssp CCCEEEEEE---SSCTTHHHHHHHHHHTTCEEE--ECHHHHHHHHTTT
T ss_pred cccEEEEEE---eccccHHHHHHHHHHCCCEEE--EcchHHHHHHHcC
Confidence 345455555 344458899999999998764 666666666 663
No 334
>2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus}
Probab=25.70 E-value=66 Score=29.22 Aligned_cols=36 Identities=19% Similarity=0.178 Sum_probs=22.8
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 011789 6 TQKPHAIFISYPLQGHVNPSVQLALKLASQGFTITFVNTH 45 (477)
Q Consensus 6 ~~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 45 (477)
+++|+|++. |+.|-+- ..|++.|.++||+|+.+...
T Consensus 10 ~~~~~vlVT--GatG~iG--~~l~~~L~~~G~~V~~~~r~ 45 (321)
T 2pk3_A 10 HGSMRALIT--GVAGFVG--KYLANHLTEQNVEVFGTSRN 45 (321)
T ss_dssp ---CEEEEE--TTTSHHH--HHHHHHHHHTTCEEEEEESC
T ss_pred cCcceEEEE--CCCChHH--HHHHHHHHHCCCEEEEEecC
Confidence 345555544 4445443 46789999999999987643
No 335
>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*
Probab=25.64 E-value=74 Score=27.44 Aligned_cols=35 Identities=17% Similarity=0.236 Sum_probs=25.6
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCc
Q 011789 9 PHAIFISYPLQGHVNPSVQLALKLASQGFTITFVNTHF 46 (477)
Q Consensus 9 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~ 46 (477)
||.++++.++.| =-..+++.|+++|++|.+.....
T Consensus 2 ~k~vlITGas~g---IG~~ia~~l~~~G~~V~~~~r~~ 36 (235)
T 3l77_A 2 MKVAVITGASRG---IGEAIARALARDGYALALGARSV 36 (235)
T ss_dssp CCEEEEESCSSH---HHHHHHHHHHHTTCEEEEEESCH
T ss_pred CCEEEEECCCcH---HHHHHHHHHHHCCCEEEEEeCCH
Confidence 566777766543 23578999999999998876543
No 336
>1dbw_A Transcriptional regulatory protein FIXJ; doubly wound five-stranded beta/alpha fold, nitrogen fixatio regulation; HET: 15P; 1.60A {Sinorhizobium meliloti} SCOP: c.23.1.1 PDB: 1dck_A* 1dcm_A 1d5w_A*
Probab=25.58 E-value=1.3e+02 Score=22.34 Aligned_cols=32 Identities=13% Similarity=0.083 Sum_probs=22.0
Q ss_pred CccEEEecCCCc--chHHHHHHh-----CCceEEEecch
Q 011789 120 NVHCLIADTYFV--WPSKLAKKF-----GLYYISFWTES 151 (477)
Q Consensus 120 ~pD~iI~D~~~~--~~~~~A~~~-----gIP~v~~~~~~ 151 (477)
+||++|.|.... .+..+.+.+ ++|.+.++...
T Consensus 47 ~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~~ii~~s~~~ 85 (126)
T 1dbw_A 47 RNGVLVTDLRMPDMSGVELLRNLGDLKINIPSIVITGHG 85 (126)
T ss_dssp CSEEEEEECCSTTSCHHHHHHHHHHTTCCCCEEEEECTT
T ss_pred CCCEEEEECCCCCCCHHHHHHHHHhcCCCCCEEEEECCC
Confidence 899999997654 455555443 57888876543
No 337
>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*
Probab=25.49 E-value=72 Score=29.49 Aligned_cols=36 Identities=11% Similarity=0.087 Sum_probs=26.3
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCc
Q 011789 7 QKPHAIFISYPLQGHVNPSVQLALKLASQGFTITFVNTHF 46 (477)
Q Consensus 7 ~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~ 46 (477)
.+|+|++. |+.|.+- ..|++.|.++||+|+.+.-..
T Consensus 24 ~~~~vlVt--GatG~iG--~~l~~~L~~~g~~V~~~~r~~ 59 (351)
T 3ruf_A 24 SPKTWLIT--GVAGFIG--SNLLEKLLKLNQVVIGLDNFS 59 (351)
T ss_dssp SCCEEEEE--TTTSHHH--HHHHHHHHHTTCEEEEEECCS
T ss_pred CCCeEEEE--CCCcHHH--HHHHHHHHHCCCEEEEEeCCC
Confidence 45777765 4555554 468899999999999987543
No 338
>1d4a_A DT-diaphorase, quinone reductase; flavoprotein, rossman fold, oxidoreductase; HET: FAD; 1.70A {Homo sapiens} SCOP: c.23.5.3 PDB: 1dxo_A* 1gg5_A* 1kbo_A* 1kbq_A* 2f1o_A* 3jsx_A* 1h69_A* 1h66_A* 1qbg_A* 1dxq_A* 1qrd_A*
Probab=25.40 E-value=86 Score=28.17 Aligned_cols=38 Identities=11% Similarity=0.092 Sum_probs=23.6
Q ss_pred CCcEEEEEcCCCc--cCHHHHHH-HHHHHHhCCCeEEEEeC
Q 011789 7 QKPHAIFISYPLQ--GHVNPSVQ-LALKLASQGFTITFVNT 44 (477)
Q Consensus 7 ~~~~il~~~~~~~--GH~~p~l~-La~~L~~rGh~Vt~~~~ 44 (477)
.||||+++...-. |.-.-+.. +++.|.+.||+|+++--
T Consensus 1 ~MmkiLiI~gSpr~~s~t~~la~~~~~~l~~~g~eV~~~dL 41 (273)
T 1d4a_A 1 VGRRALIVLAHSERTSFNYAMKEAAAAALKKKGWEVVESDL 41 (273)
T ss_dssp CCCEEEEEECCSCTTSHHHHHHHHHHHHHHHTTCEEEEEET
T ss_pred CCCEEEEEEeCCCCccHHHHHHHHHHHHHHhCCCeEEEEEc
Confidence 3788877766533 33333333 35556778999998753
No 339
>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A*
Probab=25.37 E-value=75 Score=27.62 Aligned_cols=40 Identities=5% Similarity=0.108 Sum_probs=23.7
Q ss_pred CCCCCCCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 011789 1 MAGNKTQKPHAIFISYPLQGHVNPSVQLALKLASQGFTITFVNTH 45 (477)
Q Consensus 1 ~~~~~~~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 45 (477)
|+.+... |.++++.++.| + -..+++.|+++|++|.++...
T Consensus 1 M~~~~~~--k~vlVTGas~g-I--G~~ia~~l~~~G~~V~~~~r~ 40 (241)
T 1dhr_A 1 MAASGEA--RRVLVYGGRGA-L--GSRCVQAFRARNWWVASIDVV 40 (241)
T ss_dssp -----CC--CEEEEETTTSH-H--HHHHHHHHHTTTCEEEEEESS
T ss_pred CCccCCC--CEEEEECCCcH-H--HHHHHHHHHhCCCEEEEEeCC
Confidence 4444332 45566655443 2 357899999999999887643
No 340
>1u0t_A Inorganic polyphosphate/ATP-NAD kinase; alpha-beta, beta sandwich, structural genomics, PSI, protein structure initiative; 2.30A {Mycobacterium tuberculosis} SCOP: e.52.1.1 PDB: 1u0r_A 1y3i_A* 1y3h_A
Probab=25.36 E-value=62 Score=29.76 Aligned_cols=32 Identities=19% Similarity=0.174 Sum_probs=23.9
Q ss_pred hhccCCCCccccccCCchhhHHHhc----Ccceecccc
Q 011789 354 VLAHPAIGGFLTHCGWNSVLEGLWC----GVPLLCFPL 387 (477)
Q Consensus 354 lL~~~~~~~~ItHgG~gs~~eal~~----GvP~v~~P~ 387 (477)
....+++ +|.-||=||+.+++.. ++|++.++.
T Consensus 72 ~~~~~d~--vi~~GGDGT~l~a~~~~~~~~~pvlgi~~ 107 (307)
T 1u0t_A 72 AADGCEL--VLVLGGDGTFLRAAELARNASIPVLGVNL 107 (307)
T ss_dssp ----CCC--EEEEECHHHHHHHHHHHHHHTCCEEEEEC
T ss_pred cccCCCE--EEEEeCCHHHHHHHHHhccCCCCEEEEeC
Confidence 3445666 9999999999999754 889988874
No 341
>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*
Probab=25.27 E-value=65 Score=31.29 Aligned_cols=32 Identities=16% Similarity=0.113 Sum_probs=25.7
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 011789 9 PHAIFISYPLQGHVNPSVQLALKLASQGFTITFVNTH 45 (477)
Q Consensus 9 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 45 (477)
|||.++-.|..| ..+|..|+++||+|+++...
T Consensus 1 mkI~VIG~G~vG-----~~~A~~la~~G~~V~~~d~~ 32 (436)
T 1mv8_A 1 MRISIFGLGYVG-----AVCAGCLSARGHEVIGVDVS 32 (436)
T ss_dssp CEEEEECCSTTH-----HHHHHHHHHTTCEEEEECSC
T ss_pred CEEEEECCCHHH-----HHHHHHHHHCCCEEEEEECC
Confidence 689999776666 46888999999999988643
No 342
>1q1v_A DEK protein; winged-helix motif, DNA binding protein; NMR {Homo sapiens} SCOP: a.159.4.1
Probab=25.20 E-value=1.7e+02 Score=20.16 Aligned_cols=53 Identities=17% Similarity=0.159 Sum_probs=31.9
Q ss_pred CcCHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHh-cCCCc-hHHHHHHHHHHH
Q 011789 413 VITKEEVSKNVHLLMGEKSGAKYRNAAKQVKKAMEYAL-QPNGS-SDKNMDQFIKDL 467 (477)
Q Consensus 413 ~~~~~~l~~~i~~~l~~~~~~~~~~~a~~l~~~~~~~~-~~gg~-~~~~~~~~~~~~ 467 (477)
..+.++|.++|+.+|.+.+-+.... +++++.+.... .-.-+ .+..+.+.|+..
T Consensus 11 ~Psd~ei~~~I~~IL~~aDL~tvT~--K~VR~~Le~~~pg~dLs~kK~~I~~~I~~~ 65 (70)
T 1q1v_A 11 PPTDEELKETIKKLLASANLEEVTM--KQICKKVYENYPTYDLTERKDFIKTTVKEL 65 (70)
T ss_dssp CCCHHHHHHHHHHHHTTSCGGGCCH--HHHHHHHHHHCSSSCCSHHHHHHHHHHHHH
T ss_pred CcCHHHHHHHHHHHHHhCCHHHHhH--HHHHHHHHHHccCCCChHHHHHHHHHHHHH
Confidence 5789999999999998654434442 44555565543 22222 233566655553
No 343
>1jkx_A GART;, phosphoribosylglycinamide formyltransferase; purine biosynthesis, anti-cancer agent; HET: 138; 1.60A {Escherichia coli} SCOP: c.65.1.1 PDB: 1cdd_A 1cde_A* 1c2t_A* 1grc_A 1gar_A* 2gar_A 3gar_A 1c3e_A*
Probab=25.20 E-value=3.2e+02 Score=23.34 Aligned_cols=100 Identities=6% Similarity=0.024 Sum_probs=55.7
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhC--CCeEEEEeCCc-ch---hhh-ccCCCCCCccccccccCCCCCeEEEecCC-
Q 011789 9 PHAIFISYPLQGHVNPSVQLALKLASQ--GFTITFVNTHF-IH---QQM-TKASPEMGSDIFAGVRKSGLDIRYMTLSD- 80 (477)
Q Consensus 9 ~~il~~~~~~~GH~~p~l~La~~L~~r--Gh~Vt~~~~~~-~~---~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~l~~- 80 (477)
|||+++.++..+. +-+|.+.+.+. +|+|..+.+.. .. +.. .. ++.+..++.
T Consensus 1 ~ri~vl~Sg~gsn---l~ali~~~~~~~~~~~i~~Vis~~~~~~~~~~A~~~------------------gIp~~~~~~~ 59 (212)
T 1jkx_A 1 MNIVVLISGNGSN---LQAIIDACKTNKIKGTVRAVFSNKADAFGLERARQA------------------GIATHTLIAS 59 (212)
T ss_dssp CEEEEEESSCCHH---HHHHHHHHHTTSSSSEEEEEEESCTTCHHHHHHHHT------------------TCEEEECCGG
T ss_pred CEEEEEEECCcHH---HHHHHHHHHcCCCCceEEEEEeCCCchHHHHHHHHc------------------CCcEEEeCcc
Confidence 5788887776642 55667777665 68887665543 22 122 23 666666542
Q ss_pred CCCCCCCCCCcHHHHHHHHHHHhHHHHHHHHHHhHhcCCCccEEEecCCCc-chHHHHHHhCCceEEEec
Q 011789 81 GLPLGFDRSLNHEQFMSSLLHVFSAHAEEVIGQIVRSGENVHCLIADTYFV-WPSKLAKKFGLYYISFWT 149 (477)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~pD~iI~D~~~~-~~~~~A~~~gIP~v~~~~ 149 (477)
.+. +- ....+.+.+.++.+ +||++|+-.+.. -...+-+.....++-+.+
T Consensus 60 ~~~-------~r--------~~~~~~~~~~l~~~-----~~Dliv~agy~~il~~~~l~~~~~~~iNiHp 109 (212)
T 1jkx_A 60 AFD-------SR--------EAYDRELIHEIDMY-----APDVVVLAGFMRILSPAFVSHYAGRLLNIHP 109 (212)
T ss_dssp GCS-------SH--------HHHHHHHHHHHGGG-----CCSEEEESSCCSCCCHHHHHHTTTSEEEEES
T ss_pred ccc-------ch--------hhccHHHHHHHHhc-----CCCEEEEeChhhhCCHHHHhhccCCEEEEcc
Confidence 111 10 11122233334444 999999876643 455566666666776643
No 344
>2etv_A Iron(III) ABC transporter, periplasmic iron-bindi protein, putative; periplasmic iron-binding protein, structural genomics; HET: MLY; 1.70A {Thermotoga maritima} SCOP: c.92.2.4
Probab=25.13 E-value=68 Score=29.92 Aligned_cols=28 Identities=4% Similarity=0.001 Sum_probs=20.5
Q ss_pred CccEEEecCCCc-chHHHHHHhCCceEEE
Q 011789 120 NVHCLIADTYFV-WPSKLAKKFGLYYISF 147 (477)
Q Consensus 120 ~pD~iI~D~~~~-~~~~~A~~~gIP~v~~ 147 (477)
+||+||+..... ....+.+.+|||++.+
T Consensus 96 ~PDLIi~~~~~~~~~~~~~~~~GiPvv~~ 124 (346)
T 2etv_A 96 QPDVVFITYVDRXTAXDIQEXTGIPVVVL 124 (346)
T ss_dssp CCSEEEEESCCHHHHHHHHHHHTSCEEEE
T ss_pred CCCEEEEeCCccchHHHHHHhcCCcEEEE
Confidence 999999875432 2334567899999987
No 345
>2jae_A L-amino acid oxidase; oxidoreductase, dimerisation mode, hydride transfer mechanism, GR2-family, flavoenzyme, FAD containing; HET: FAD; 1.25A {Rhodococcus opacus} PDB: 2jb1_A* 2jb2_A* 2jb3_A*
Probab=25.10 E-value=70 Score=31.33 Aligned_cols=39 Identities=15% Similarity=0.326 Sum_probs=30.7
Q ss_pred CCCCCCCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 011789 1 MAGNKTQKPHAIFISYPLQGHVNPSVQLALKLASQGFTITFVNT 44 (477)
Q Consensus 1 ~~~~~~~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 44 (477)
|.++....++|+++-.|..| +..|..|+++|++|+++--
T Consensus 4 ~~~~~~~~~~v~IIGaG~aG-----l~aA~~L~~~g~~v~v~E~ 42 (489)
T 2jae_A 4 LIGKVKGSHSVVVLGGGPAG-----LCSAFELQKAGYKVTVLEA 42 (489)
T ss_dssp CCCCCCSCCEEEEECCSHHH-----HHHHHHHHHTTCEEEEECS
T ss_pred hhhcccCCCCEEEECCCHHH-----HHHHHHHHHCCCCEEEEec
Confidence 34555667899999888655 6788999999999999853
No 346
>3c3m_A Response regulator receiver protein; structural genomics, unknown function, PSI-2, protein struct initiative; HET: MSE; 1.70A {Methanoculleus marisnigri JR1}
Probab=25.02 E-value=1.2e+02 Score=23.08 Aligned_cols=31 Identities=3% Similarity=-0.029 Sum_probs=21.5
Q ss_pred CccEEEecCCCc--chHHHHHHh-------CCceEEEecc
Q 011789 120 NVHCLIADTYFV--WPSKLAKKF-------GLYYISFWTE 150 (477)
Q Consensus 120 ~pD~iI~D~~~~--~~~~~A~~~-------gIP~v~~~~~ 150 (477)
+||+||.|.... .+..+.+.+ .+|++.++..
T Consensus 47 ~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~~~~ii~ls~~ 86 (138)
T 3c3m_A 47 PPDLVLLDIMMEPMDGWETLERIKTDPATRDIPVLMLTAK 86 (138)
T ss_dssp CCSEEEEESCCSSSCHHHHHHHHHHSTTTTTSCEEEEESS
T ss_pred CCCEEEEeCCCCCCCHHHHHHHHHcCcccCCCCEEEEECC
Confidence 899999997654 455555443 5788887543
No 347
>1vhq_A Enhancing lycopene biosynthesis protein 2; structural genomics, unknown function; 1.65A {Escherichia coli} SCOP: c.23.16.2 PDB: 1oy1_A
Probab=24.95 E-value=1.3e+02 Score=26.03 Aligned_cols=40 Identities=10% Similarity=-0.011 Sum_probs=29.9
Q ss_pred CCcEEEEEcC-----CCccCHHHHHHHHHHHHhCCCeEEEEeCCcc
Q 011789 7 QKPHAIFISY-----PLQGHVNPSVQLALKLASQGFTITFVNTHFI 47 (477)
Q Consensus 7 ~~~~il~~~~-----~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~ 47 (477)
.|+||+|+.. ++. ...=+......|.+.|++|++++....
T Consensus 5 ~m~kv~ill~~~~~~~g~-~~~E~~~p~~~l~~ag~~v~~~s~~g~ 49 (232)
T 1vhq_A 5 TMKKIGVILSGCGVYDGS-EIHEAVLTLLAISRSGAQAVCFAPDKQ 49 (232)
T ss_dssp -CCEEEEECCSBSTTTSB-CHHHHHHHHHHHHHTTCEEEEEECSSB
T ss_pred cCCeEEEEEccCCCCCCe-eHHHHHHHHHHHHHCCCEEEEEecCCC
Confidence 4679999988 543 455566667888899999999997653
No 348
>1eiw_A Hypothetical protein MTH538; CHEY-like fold, flavodoxin-like fold, (A/B)5 doubly wound fold, parallel beta sheet; NMR {Methanothermobacterthermautotrophicus} SCOP: c.23.3.1
Probab=24.93 E-value=1e+02 Score=23.52 Aligned_cols=65 Identities=6% Similarity=-0.081 Sum_probs=44.2
Q ss_pred hccCCCCccccccCCch---------hhHHHhcCcceeccccccchhhHHHHHHhhhcceeeecCCCCcCHHHHHHHHHH
Q 011789 355 LAHPAIGGFLTHCGWNS---------VLEGLWCGVPLLCFPLYTDQFTNRKLAVDDWNVGLNLSNEKVITKEEVSKNVHL 425 (477)
Q Consensus 355 L~~~~~~~~ItHgG~gs---------~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~G~~~~~~~~~~~~~l~~~i~~ 425 (477)
+..+++ +|--.|..| +..|...|+|++.+=.+..+. .-..+++. +.-+. ..+.+.|.++|+.
T Consensus 36 I~~~~~--vIvL~G~~t~~s~wv~~EI~~A~~~gkpIigV~~~g~~~-~P~~l~~~-a~~iV-----~Wn~~~I~~aI~~ 106 (111)
T 1eiw_A 36 PEDADA--VIVLAGLWGTRRDEILGAVDLARKSSKPIITVRPYGLEN-VPPELEAV-SSEVV-----GWNPHCIRDALED 106 (111)
T ss_dssp SSSCSE--EEEEGGGTTTSHHHHHHHHHHHTTTTCCEEEECCSSSSC-CCTTHHHH-CSEEE-----CSCHHHHHHHHHH
T ss_pred cccCCE--EEEEeCCCcCCChHHHHHHHHHHHcCCCEEEEEcCCCCc-CCHHHHhh-Cceec-----cCCHHHHHHHHHh
Confidence 344566 888888887 567788999998877666541 12225554 43333 4788999999987
Q ss_pred Hhc
Q 011789 426 LMG 428 (477)
Q Consensus 426 ~l~ 428 (477)
.++
T Consensus 107 ~~~ 109 (111)
T 1eiw_A 107 ALD 109 (111)
T ss_dssp HHC
T ss_pred ccC
Confidence 653
No 349
>2gf2_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; structural genomics, structural genomics consortium, SGC, oxidoreductase; 2.38A {Homo sapiens} PDB: 2i9p_A*
Probab=24.91 E-value=50 Score=29.86 Aligned_cols=32 Identities=19% Similarity=0.314 Sum_probs=25.7
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 011789 9 PHAIFISYPLQGHVNPSVQLALKLASQGFTITFVNTH 45 (477)
Q Consensus 9 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 45 (477)
|||.|+-.|..|. .+++.|.+.||+|+++...
T Consensus 1 m~i~iiG~G~mG~-----~~a~~l~~~g~~V~~~~~~ 32 (296)
T 2gf2_A 1 MPVGFIGLGNMGN-----PMAKNLMKHGYPLIIYDVF 32 (296)
T ss_dssp CCEEEECCSTTHH-----HHHHHHHHTTCCEEEECSS
T ss_pred CeEEEEeccHHHH-----HHHHHHHHCCCEEEEEeCC
Confidence 5899998877775 5788899999999887543
No 350
>3tqq_A Methionyl-tRNA formyltransferase; protein synthesis; 2.00A {Coxiella burnetii}
Probab=24.87 E-value=67 Score=29.71 Aligned_cols=34 Identities=15% Similarity=0.075 Sum_probs=26.5
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCc
Q 011789 8 KPHAIFISYPLQGHVNPSVQLALKLASQGFTITFVNTHF 46 (477)
Q Consensus 8 ~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~ 46 (477)
+|||+|+-.+..+- ...++|.++||+|..+.+..
T Consensus 2 ~mrivf~Gtp~fa~-----~~L~~L~~~~~~v~~Vvt~p 35 (314)
T 3tqq_A 2 SLKIVFAGTPQFAV-----PTLRALIDSSHRVLAVYTQP 35 (314)
T ss_dssp CCEEEEEECSGGGH-----HHHHHHHHSSSEEEEEECCC
T ss_pred CcEEEEECCCHHHH-----HHHHHHHHCCCeEEEEEeCC
Confidence 48999998886653 45678888999998877644
No 351
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=24.81 E-value=54 Score=32.11 Aligned_cols=33 Identities=15% Similarity=0.146 Sum_probs=27.0
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCc
Q 011789 9 PHAIFISYPLQGHVNPSVQLALKLASQGFTITFVNTHF 46 (477)
Q Consensus 9 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~ 46 (477)
|||.|+-.|..| ..+|..|+++||+|+++....
T Consensus 3 mkI~VIG~G~vG-----~~lA~~La~~G~~V~~~D~~~ 35 (450)
T 3gg2_A 3 LDIAVVGIGYVG-----LVSATCFAELGANVRCIDTDR 35 (450)
T ss_dssp CEEEEECCSHHH-----HHHHHHHHHTTCEEEEECSCH
T ss_pred CEEEEECcCHHH-----HHHHHHHHhcCCEEEEEECCH
Confidence 799999776665 568999999999999886544
No 352
>3c7a_A Octopine dehydrogenase; L) stereospecific opine dehydrogenas, oxidorecutase, oxidoreductase; HET: NAD; 2.10A {Pecten maximus} PDB: 3c7c_B* 3c7d_B* 3iqd_B*
Probab=24.77 E-value=31 Score=33.16 Aligned_cols=31 Identities=16% Similarity=0.099 Sum_probs=25.9
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHh-CCCeEEEEe
Q 011789 8 KPHAIFISYPLQGHVNPSVQLALKLAS-QGFTITFVN 43 (477)
Q Consensus 8 ~~~il~~~~~~~GH~~p~l~La~~L~~-rGh~Vt~~~ 43 (477)
||||+++-.|+.|. .+|..|++ .||+|+++.
T Consensus 2 ~mkI~ViGaG~~G~-----~~a~~La~~~G~~V~~~~ 33 (404)
T 3c7a_A 2 TVKVCVCGGGNGAH-----TLSGLAASRDGVEVRVLT 33 (404)
T ss_dssp CEEEEEECCSHHHH-----HHHHHHTTSTTEEEEEEC
T ss_pred CceEEEECCCHHHH-----HHHHHHHhCCCCEEEEEe
Confidence 58999998888776 56888888 499999987
No 353
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6
Probab=24.57 E-value=59 Score=29.18 Aligned_cols=33 Identities=18% Similarity=0.292 Sum_probs=26.0
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhCCC--eEEEEeCC
Q 011789 8 KPHAIFISYPLQGHVNPSVQLALKLASQGF--TITFVNTH 45 (477)
Q Consensus 8 ~~~il~~~~~~~GH~~p~l~La~~L~~rGh--~Vt~~~~~ 45 (477)
||+|.|+-.|..|. .+++.|.+.|| +|+++...
T Consensus 1 m~~I~iIG~G~mG~-----~~a~~l~~~g~~~~V~~~d~~ 35 (281)
T 2g5c_A 1 MQNVLIVGVGFMGG-----SFAKSLRRSGFKGKIYGYDIN 35 (281)
T ss_dssp CCEEEEESCSHHHH-----HHHHHHHHTTCCSEEEEECSC
T ss_pred CcEEEEEecCHHHH-----HHHHHHHhcCCCcEEEEEeCC
Confidence 67999998877774 57888999999 88776543
No 354
>3goc_A Endonuclease V; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: YES; 1.60A {Streptomyces avermitilis}
Probab=24.44 E-value=1.1e+02 Score=26.90 Aligned_cols=28 Identities=29% Similarity=0.256 Sum_probs=22.9
Q ss_pred CccEEEecCCCc-------chHHHHHHhCCceEEE
Q 011789 120 NVHCLIADTYFV-------WPSKLAKKFGLYYISF 147 (477)
Q Consensus 120 ~pD~iI~D~~~~-------~~~~~A~~~gIP~v~~ 147 (477)
+||++++|..-. -+..+.-.+|+|+|.+
T Consensus 107 ~PdlllvDG~GiaHPRr~GlAsHlGv~l~~PtIGV 141 (237)
T 3goc_A 107 PPGLIVCDGYGVAHPRRFGLASHLGVLTGLPTIGV 141 (237)
T ss_dssp CCSEEEEESCSSCSTTSCCHHHHHHHHHCSCEEEE
T ss_pred CCCEEEEeCceeecCCCcchhheeeeecCCCEEee
Confidence 899999998644 3566778889999998
No 355
>3lqk_A Dipicolinate synthase subunit B; flavoprotein, PSI2, MCSG, structural protein structure initiative, midwest center for structural genomics; 2.10A {Bacillus halodurans}
Probab=24.40 E-value=3.3e+02 Score=23.13 Aligned_cols=53 Identities=11% Similarity=-0.021 Sum_probs=38.0
Q ss_pred HhcCcceecccc----ccchhhHHHHHHhhhcceeeecCC--C--------CcCHHHHHHHHHHHhcC
Q 011789 376 LWCGVPLLCFPL----YTDQFTNRKLAVDDWNVGLNLSNE--K--------VITKEEVSKNVHLLMGE 429 (477)
Q Consensus 376 l~~GvP~v~~P~----~~DQ~~na~~v~~~~G~G~~~~~~--~--------~~~~~~l~~~i~~~l~~ 429 (477)
+..+.|+|++|- ....+.|..++.+. |+=+..... . ..+.+.+.+.+.++|++
T Consensus 120 Lk~~~plvl~Pamn~~m~~h~~Nm~~L~~~-G~~i~~P~~~~~~~~~p~s~~a~~~~i~~tv~~al~~ 186 (201)
T 3lqk_A 120 LRNGKPVVVGISTNDALGLNGINIMRLMAT-KNIYFIPFGQDNPQVKPNSLVARMEALPETIEAALRG 186 (201)
T ss_dssp HHTTCCEEEEEEETTTTTTTHHHHHHHHTS-TTEEECCEEESCTTTCTTCEEECGGGHHHHHHHHHTT
T ss_pred hhcCCCEEEEECCChhHHHhHHHHHHHHHC-CCEEECCCCccccccCCCcccCCHHHHHHHHHHHHhc
Confidence 567999999994 46778899999998 875554320 0 13447788888888764
No 356
>1i36_A Conserved hypothetical protein MTH1747; NADP binding domain, protein NADP complex, structural genomics, PSI; HET: NAP; 2.00A {Methanothermobacterthermautotrophicus} SCOP: a.100.1.8 c.2.1.6
Probab=24.40 E-value=42 Score=29.78 Aligned_cols=29 Identities=24% Similarity=0.310 Sum_probs=23.8
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEE
Q 011789 9 PHAIFISYPLQGHVNPSVQLALKLASQGFTITFV 42 (477)
Q Consensus 9 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~ 42 (477)
|||.|+-.|..|. .+|+.|.+.||+|++.
T Consensus 1 M~I~iIG~G~mG~-----~la~~l~~~g~~V~~~ 29 (264)
T 1i36_A 1 LRVGFIGFGEVAQ-----TLASRLRSRGVEVVTS 29 (264)
T ss_dssp CEEEEESCSHHHH-----HHHHHHHHTTCEEEEC
T ss_pred CeEEEEechHHHH-----HHHHHHHHCCCeEEEe
Confidence 6899997776664 5789999999999885
No 357
>1z7e_A Protein aRNA; rossmann fold, OB-like fold, hydrolase; HET: ATP UGA; 3.00A {Escherichia coli} SCOP: b.46.1.1 c.2.1.2 c.65.1.1
Probab=24.32 E-value=1.5e+02 Score=30.34 Aligned_cols=33 Identities=21% Similarity=0.276 Sum_probs=22.9
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCc
Q 011789 9 PHAIFISYPLQGHVNPSVQLALKLASQGFTITFVNTHF 46 (477)
Q Consensus 9 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~ 46 (477)
|||+|+..+..| ....++|.++||+|..+.+..
T Consensus 1 ~ri~~~~s~~~~-----~~~l~~l~~~~~~i~~v~t~~ 33 (660)
T 1z7e_A 1 MKTVVFAYHDMG-----CLGIEALLAAGYEISAIFTHT 33 (660)
T ss_dssp CEEEEEECHHHH-----HHHHHHHHHTTCEEEEEECCC
T ss_pred CEEEEEEeCHHH-----HHHHHHHHhCCCCEEEEEeCC
Confidence 688888766443 233567777899998877654
No 358
>1q57_A DNA primase/helicase; dntpase, DNA replication, transferase; HET: DNA; 3.45A {Enterobacteria phage T7} SCOP: c.37.1.11 e.13.1.2
Probab=24.31 E-value=2.1e+02 Score=28.17 Aligned_cols=42 Identities=12% Similarity=-0.076 Sum_probs=34.9
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhC-CCeEEEEeCCcchhhh
Q 011789 10 HAIFISYPLQGHVNPSVQLALKLASQ-GFTITFVNTHFIHQQM 51 (477)
Q Consensus 10 ~il~~~~~~~GH~~p~l~La~~L~~r-Gh~Vt~~~~~~~~~~~ 51 (477)
=+++...|+.|=..-.+.+|..++.+ |..|.|++.....+.+
T Consensus 244 l~li~G~pG~GKT~lal~~a~~~a~~~g~~vl~~s~E~s~~~l 286 (503)
T 1q57_A 244 VIMVTSGSGMVMSTFVRQQALQWGTAMGKKVGLAMLEESVEET 286 (503)
T ss_dssp EEEEEESSCHHHHHHHHHHHHHHTTTSCCCEEEEESSSCHHHH
T ss_pred EEEEeecCCCCchHHHHHHHHHHHHhcCCcEEEEeccCCHHHH
Confidence 45677778999999999999999987 9999999988765443
No 359
>3oow_A Phosphoribosylaminoimidazole carboxylase,catalyic; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE; 1.75A {Francisella tularensis subsp} SCOP: c.23.8.1 PDB: 3opq_A*
Probab=24.30 E-value=3e+02 Score=22.64 Aligned_cols=139 Identities=10% Similarity=0.078 Sum_probs=76.4
Q ss_pred cEEEEEecccccCCHHHHHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCchhHHHhcCCCeEEEeeccHHHhhccCCCCc
Q 011789 283 SVLYVSFGSYAHVSKRDLIEIANGIAKSKVTFIWILRPDIVSSDDPNPLPEDFKKEVADRSMIITWCCQTSVLAHPAIGG 362 (477)
Q Consensus 283 ~~I~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~lp~~~~~~~~~nv~v~~~~p~~~lL~~~~~~~ 362 (477)
|.|-|-+||.. +....++....++..|..+-+.+-+. ...|+...+- + .-+....+++
T Consensus 6 p~V~IimgS~S--D~~v~~~a~~~l~~~gi~~ev~V~Sa-------HRtp~~l~~~----------~---~~~~~~g~~V 63 (166)
T 3oow_A 6 VQVGVIMGSKS--DWSTMKECCDILDNLGIGYECEVVSA-------HRTPDKMFDY----------A---ETAKERGLKV 63 (166)
T ss_dssp EEEEEEESSGG--GHHHHHHHHHHHHHTTCEEEEEECCT-------TTCHHHHHHH----------H---HHTTTTTCCE
T ss_pred CeEEEEECcHH--hHHHHHHHHHHHHHcCCCEEEEEEcC-------cCCHHHHHHH----------H---HHHHhCCCcE
Confidence 45666677765 46667888888899998876666544 3455533211 1 1111122344
Q ss_pred cccccCCchhhHHHh---cCcceeccccccc---hhhHHHHHHhhh-cceeeecCCCCcC------HHHHHHHHHHHhcC
Q 011789 363 FLTHCGWNSVLEGLW---CGVPLLCFPLYTD---QFTNRKLAVDDW-NVGLNLSNEKVIT------KEEVSKNVHLLMGE 429 (477)
Q Consensus 363 ~ItHgG~gs~~eal~---~GvP~v~~P~~~D---Q~~na~~v~~~~-G~G~~~~~~~~~~------~~~l~~~i~~~l~~ 429 (477)
+|.=.|+-.-+-++. .-+|+|.+|...- -.+--.-+.+.- |+|+..- .++ +.-+...|. -+.|
T Consensus 64 iIa~AG~aa~LpgvvA~~t~~PVIgVP~~~~~l~G~dsLlS~vqmp~gvpVatV---~I~~ag~~nAa~lAa~Il-~~~d 139 (166)
T 3oow_A 64 IIAGAGGAAHLPGMVAAKTTLPVLGVPVKSSTLNGQDSLLSIVQMPAGIPVATF---AIGMAGAKNAALFAASIL-QHTD 139 (166)
T ss_dssp EEEEECSSCCHHHHHHHTCSSCEEEEECCCTTTTTHHHHHHHHTCCTTSCCEEC---CSTHHHHHHHHHHHHHHH-GGGC
T ss_pred EEEECCcchhhHHHHHhccCCCEEEeecCcCCCCCHHHHHHHhcCCCCCceEEE---ecCCccchHHHHHHHHHH-cCCC
Confidence 887777644333333 3469999997432 222222233330 3333220 232 233332222 2568
Q ss_pred CchHHHHHHHHHHHHHHHHHh
Q 011789 430 KSGAKYRNAAKQVKKAMEYAL 450 (477)
Q Consensus 430 ~~~~~~~~~a~~l~~~~~~~~ 450 (477)
+ +++++.+..++++++..
T Consensus 140 ~---~l~~kl~~~r~~~~~~v 157 (166)
T 3oow_A 140 I---NIAKALAEFRAEQTRFV 157 (166)
T ss_dssp H---HHHHHHHHHHHHHHHHH
T ss_pred H---HHHHHHHHHHHHHHHHH
Confidence 8 89999999998888654
No 360
>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus}
Probab=24.25 E-value=60 Score=28.01 Aligned_cols=35 Identities=17% Similarity=0.106 Sum_probs=24.3
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCc
Q 011789 9 PHAIFISYPLQGHVNPSVQLALKLASQGFTITFVNTHF 46 (477)
Q Consensus 9 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~ 46 (477)
||.++++.++.| =-..+++.|+++|++|.++....
T Consensus 1 Mk~vlVTGas~g---IG~~~a~~l~~~G~~V~~~~r~~ 35 (230)
T 3guy_A 1 MSLIVITGASSG---LGAELAKLYDAEGKATYLTGRSE 35 (230)
T ss_dssp --CEEEESTTSH---HHHHHHHHHHHTTCCEEEEESCH
T ss_pred CCEEEEecCCch---HHHHHHHHHHHCCCEEEEEeCCH
Confidence 566777766643 23578999999999998887543
No 361
>1vi6_A 30S ribosomal protein S2P; structural genomics, ribosome; 1.95A {Archaeoglobus fulgidus} SCOP: c.23.15.1 PDB: 1vi5_A
Probab=24.25 E-value=66 Score=27.74 Aligned_cols=31 Identities=10% Similarity=0.103 Sum_probs=24.0
Q ss_pred CccEEE-ecCCCc-chHHHHHHhCCceEEEecc
Q 011789 120 NVHCLI-ADTYFV-WPSKLAKKFGLYYISFWTE 150 (477)
Q Consensus 120 ~pD~iI-~D~~~~-~~~~~A~~~gIP~v~~~~~ 150 (477)
.||++| +|+..- .+..=|.++|||.|.++-+
T Consensus 115 ~PdlliV~Dp~~e~~ai~EA~~l~IPvIalvDT 147 (208)
T 1vi6_A 115 EPEVVFVNDPAIDKQAVSEATAVGIPVVALCDS 147 (208)
T ss_dssp CCSEEEESCTTTTHHHHHHHHHTTCCEEEEECT
T ss_pred CCCEEEEECCCcchhHHHHHHHhCCCEEEEeCC
Confidence 789877 565433 6788899999999999654
No 362
>3o1l_A Formyltetrahydrofolate deformylase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 2.20A {Pseudomonas syringae PV}
Probab=24.19 E-value=4.1e+02 Score=24.19 Aligned_cols=103 Identities=16% Similarity=0.249 Sum_probs=56.2
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHhC--CCeEEEEeCC-c-chhhh-ccCCCCCCccccccccCCCCCeEEEecCC
Q 011789 6 TQKPHAIFISYPLQGHVNPSVQLALKLASQ--GFTITFVNTH-F-IHQQM-TKASPEMGSDIFAGVRKSGLDIRYMTLSD 80 (477)
Q Consensus 6 ~~~~~il~~~~~~~GH~~p~l~La~~L~~r--Gh~Vt~~~~~-~-~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~l~~ 80 (477)
..|+||+++.++. || -+.+|..+-.+- +.+|..+.+. . ..... .. ++.+..+|.
T Consensus 103 ~~~~ri~vl~Sg~-g~--nl~~ll~~~~~g~l~~~I~~Visn~~~~~~~A~~~------------------gIp~~~~~~ 161 (302)
T 3o1l_A 103 AQKKRVVLMASRE-SH--CLADLLHRWHSDELDCDIACVISNHQDLRSMVEWH------------------DIPYYHVPV 161 (302)
T ss_dssp TSCCEEEEEECSC-CH--HHHHHHHHHHTTCSCSEEEEEEESSSTTHHHHHTT------------------TCCEEECCC
T ss_pred CCCcEEEEEEeCC-ch--hHHHHHHHHHCCCCCcEEEEEEECcHHHHHHHHHc------------------CCCEEEcCC
Confidence 4578998888776 54 355555554432 4677776543 2 33333 33 666766653
Q ss_pred CCCCCCCCCCcHHHHHHHHHHHhHHHHHHHHHHhHhcCCCccEEEecCCCc-chHHHHHHhCCceEEEec
Q 011789 81 GLPLGFDRSLNHEQFMSSLLHVFSAHAEEVIGQIVRSGENVHCLIADTYFV-WPSKLAKKFGLYYISFWT 149 (477)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~pD~iI~D~~~~-~~~~~A~~~gIP~v~~~~ 149 (477)
... .. ....+.+.+.+++. +||+||.-.+.. -...+-+.+.-.++=+.+
T Consensus 162 ~~~----~r-----------~~~~~~~~~~l~~~-----~~DliVlagym~IL~~~~l~~~~~~~INiHp 211 (302)
T 3o1l_A 162 DPK----DK-----------EPAFAEVSRLVGHH-----QADVVVLARYMQILPPQLCREYAHQVINIHH 211 (302)
T ss_dssp CSS----CC-----------HHHHHHHHHHHHHT-----TCSEEEESSCCSCCCTTHHHHTTTCEEEEES
T ss_pred CcC----CH-----------HHHHHHHHHHHHHh-----CCCEEEHhHhhhhcCHHHHhhhhCCeEEeCc
Confidence 210 00 11122333445554 999999876654 444555666555666533
No 363
>1o97_C Electron transferring flavoprotein beta-subunit; FAD binding; HET: AMP FAD; 1.6A {Methylophilus methylotrophus} SCOP: c.26.2.3 PDB: 1o95_C* 1o96_A* 1o94_C* 3clr_C* 3cls_C* 3clt_C* 3clu_C*
Probab=24.16 E-value=1.2e+02 Score=27.08 Aligned_cols=38 Identities=13% Similarity=-0.043 Sum_probs=29.1
Q ss_pred HHHHHHHhHhcCCCccEEEecCCCc------chHHHHHHhCCceEEEec
Q 011789 107 AEEVIGQIVRSGENVHCLIADTYFV------WPSKLAKKFGLYYISFWT 149 (477)
Q Consensus 107 ~~~ll~~~~~~~~~pD~iI~D~~~~------~~~~~A~~~gIP~v~~~~ 149 (477)
+.+++++. +||+||+..-.. -+..+|..+|+|++...+
T Consensus 104 La~~i~~~-----~~dlVl~G~~s~d~~~~~v~p~lA~~L~~~~vt~v~ 147 (264)
T 1o97_C 104 LTEVIKKE-----APDMVFAGVQSSDQAYASTGISVASYLNWPHAAVVA 147 (264)
T ss_dssp HHHHHHHH-----CCSEEEEESCCTTTCCCCHHHHHHHHHTCCEEEEEE
T ss_pred HHHHHHhc-----CCCEEEEcCCccCCchhhHHHHHHHHhCCCcccceE
Confidence 44555554 899999876552 578899999999998754
No 364
>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A*
Probab=24.10 E-value=56 Score=31.79 Aligned_cols=35 Identities=6% Similarity=-0.011 Sum_probs=26.2
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCc
Q 011789 6 TQKPHAIFISYPLQGHVNPSVQLALKLASQGFTITFVNTHF 46 (477)
Q Consensus 6 ~~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~ 46 (477)
..+|||.++-.|..|. .+|..|++ ||+|+.+-...
T Consensus 34 ~~~mkIaVIGlG~mG~-----~lA~~La~-G~~V~~~D~~~ 68 (432)
T 3pid_A 34 SEFMKITISGTGYVGL-----SNGVLIAQ-NHEVVALDIVQ 68 (432)
T ss_dssp -CCCEEEEECCSHHHH-----HHHHHHHT-TSEEEEECSCH
T ss_pred cCCCEEEEECcCHHHH-----HHHHHHHc-CCeEEEEecCH
Confidence 4678999998776663 56777887 99999886543
No 365
>2bru_C NAD(P) transhydrogenase subunit beta; paramagnetic transhydrogenase, inner membrane, membrane, oxidoreductase, transmembrane; HET: NAD NAP; NMR {Escherichia coli}
Probab=24.08 E-value=59 Score=26.92 Aligned_cols=40 Identities=15% Similarity=0.110 Sum_probs=30.3
Q ss_pred cEEEEEcCCCc---cCHHHHHHHHHHHHhCCCeEEEEeCCcch
Q 011789 9 PHAIFISYPLQ---GHVNPSVQLALKLASQGFTITFVNTHFIH 48 (477)
Q Consensus 9 ~~il~~~~~~~---GH~~p~l~La~~L~~rGh~Vt~~~~~~~~ 48 (477)
.+|+++|.=+. --.++...|++.|.++|.+|.|..+|-.-
T Consensus 31 ~~ViIVPGYGmAVAqAQ~~v~el~~~L~~~G~~V~faIHPVAG 73 (186)
T 2bru_C 31 HSVIITPGYGMAVAQAQYPVAEITEKLRARGINVRFGIHPVAG 73 (186)
T ss_dssp SEEEEECSBHHHHTTTHHHHHHHHHHHHHHCCEEEEEECSSSS
T ss_pred CeEEEECChHHHHHHHHHHHHHHHHHHHHCCCeEEEEeccccc
Confidence 47777765321 13468899999999999999999988653
No 366
>1u9c_A APC35852; structural genomics, protein structure initiative, MCSG, PAR disease, chaperone, cysteine protease, PSI; 1.35A {Geobacillus stearothermophilus} SCOP: c.23.16.2
Probab=23.92 E-value=1.4e+02 Score=25.48 Aligned_cols=39 Identities=5% Similarity=0.024 Sum_probs=28.5
Q ss_pred cEEEEEcCC---------CccCHHHHHHHHHHHHhCCCeEEEEeCCcc
Q 011789 9 PHAIFISYP---------LQGHVNPSVQLALKLASQGFTITFVNTHFI 47 (477)
Q Consensus 9 ~~il~~~~~---------~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~ 47 (477)
+||+|+... ..-...=+....+.|.+.|++|++++....
T Consensus 6 ~kv~ill~~~~~~~~~~~~G~~~~e~~~p~~~l~~ag~~v~~vs~~~~ 53 (224)
T 1u9c_A 6 KRVLMVVTNHTTITDDHKTGLWLEEFAVPYLVFQEKGYDVKVASIQGG 53 (224)
T ss_dssp CEEEEEECCCCEEETTEECCBCHHHHHHHHHHHHHTTCEEEEEESSCB
T ss_pred ceEEEEECCcccccCCCCCceeHHHHHHHHHHHHHCCCeEEEECCCCC
Confidence 588888772 223345567777888889999999997653
No 367
>3oti_A CALG3; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD C0T; 1.60A {Micromonospora echinospora} PDB: 3d0q_A* 3d0r_A*
Probab=23.86 E-value=4.3e+02 Score=24.46 Aligned_cols=90 Identities=6% Similarity=0.011 Sum_probs=56.6
Q ss_pred cEEEEEcCCCcc----CHHHHHHHHHHHHhCCCeEEEEeCCcchhhhccCCCCCCccccccccCCCCCeEEEecCCCCCC
Q 011789 9 PHAIFISYPLQG----HVNPSVQLALKLASQGFTITFVNTHFIHQQMTKASPEMGSDIFAGVRKSGLDIRYMTLSDGLPL 84 (477)
Q Consensus 9 ~~il~~~~~~~G----H~~p~l~La~~L~~rGh~Vt~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 84 (477)
.++++++.|+.+ ...-+..+.+.|.+.+.+|.+++.....+.+....+ ++.+...- +
T Consensus 232 ~~~v~v~~G~~~~~~~~~~~~~~~~~~l~~~~~~~v~~~g~~~~~~l~~~~~---------------~v~~~~~~---~- 292 (398)
T 3oti_A 232 RPEVAITMGTIELQAFGIGAVEPIIAAAGEVDADFVLALGDLDISPLGTLPR---------------NVRAVGWT---P- 292 (398)
T ss_dssp SCEEEECCTTTHHHHHCGGGHHHHHHHHHTSSSEEEEECTTSCCGGGCSCCT---------------TEEEESSC---C-
T ss_pred CCEEEEEcCCCccccCcHHHHHHHHHHHHcCCCEEEEEECCcChhhhccCCC---------------cEEEEccC---C-
Confidence 467788888773 334477888899888999988887755433322111 44443211 1
Q ss_pred CCCCCCcHHHHHHHHHHHhHHHHHHHHHHhHhcCCCccEEEecCCCcchHHHHHHhCCceEEE
Q 011789 85 GFDRSLNHEQFMSSLLHVFSAHAEEVIGQIVRSGENVHCLIADTYFVWPSKLAKKFGLYYISF 147 (477)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~pD~iI~D~~~~~~~~~A~~~gIP~v~~ 147 (477)
+ .+++. ..|++|+.. ......-|-.+|+|.|.+
T Consensus 293 -----------~-----------~~ll~-------~ad~~v~~~-G~~t~~Eal~~G~P~v~~ 325 (398)
T 3oti_A 293 -----------L-----------HTLLR-------TCTAVVHHG-GGGTVMTAIDAGIPQLLA 325 (398)
T ss_dssp -----------H-----------HHHHT-------TCSEEEECC-CHHHHHHHHHHTCCEEEC
T ss_pred -----------H-----------HHHHh-------hCCEEEECC-CHHHHHHHHHhCCCEEEc
Confidence 1 11222 569999874 334667788899999996
No 368
>3r5x_A D-alanine--D-alanine ligase; alpha-beta structure, cytosol, structural genomics, for structural genomics of infectious diseases, csgid; HET: MSE ATP; 2.00A {Bacillus anthracis} PDB: 3r23_A*
Probab=23.82 E-value=49 Score=30.14 Aligned_cols=45 Identities=7% Similarity=0.014 Sum_probs=32.6
Q ss_pred CCcEEEEEcCCCcc----CHHHHHHHHHHHHhCCCeEEEEeCCcchhhh
Q 011789 7 QKPHAIFISYPLQG----HVNPSVQLALKLASQGFTITFVNTHFIHQQM 51 (477)
Q Consensus 7 ~~~~il~~~~~~~G----H~~p~l~La~~L~~rGh~Vt~~~~~~~~~~~ 51 (477)
.+|||+++..+-.. -+.-...++++|.++||+|..+........+
T Consensus 2 ~~m~v~vl~gg~s~e~~vs~~s~~~v~~al~~~g~~v~~i~~~~~~~~~ 50 (307)
T 3r5x_A 2 NAMRIGVIMGGVSSEKQVSIMTGNEMIANLDKNKYEIVPITLNEKMDLI 50 (307)
T ss_dssp CCEEEEEEECCSHHHHHHHHHHHHHHHHHSCTTTEEEEEEECSSGGGHH
T ss_pred CCcEEEEEeCCCCcchHhHHHHHHHHHHHHHHCCCEEEEEcccCchhHH
Confidence 46899998866322 2345668899999999999999877554444
No 369
>3p9x_A Phosphoribosylglycinamide formyltransferase; structural genomics, PSI-biology, protein STRU initiative; 1.90A {Bacillus halodurans}
Probab=23.73 E-value=3.5e+02 Score=23.19 Aligned_cols=105 Identities=6% Similarity=0.038 Sum_probs=53.0
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhC--CCeEEEEeCCc-chhhh-ccCCCCCCccccccccCCCCCeEEEecCCCCC
Q 011789 8 KPHAIFISYPLQGHVNPSVQLALKLASQ--GFTITFVNTHF-IHQQM-TKASPEMGSDIFAGVRKSGLDIRYMTLSDGLP 83 (477)
Q Consensus 8 ~~~il~~~~~~~GH~~p~l~La~~L~~r--Gh~Vt~~~~~~-~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 83 (477)
|+||+++.++. |+ -+-+|.++..+- ..+|.++.+.. ..... .+... ++.+..++..
T Consensus 2 m~riavl~Sg~-Gs--nl~ali~~~~~~~l~~eI~~Visn~~~a~v~~~A~~~---------------gIp~~~~~~~-- 61 (211)
T 3p9x_A 2 MKRVAIFASGS-GT--NAEAIIQSQKAGQLPCEVALLITDKPGAKVVERVKVH---------------EIPVCALDPK-- 61 (211)
T ss_dssp -CEEEEECCTT-CH--HHHHHHHHHHTTCCSSEEEEEEESCSSSHHHHHHHTT---------------TCCEEECCGG--
T ss_pred CCEEEEEEeCC-ch--HHHHHHHHHHcCCCCcEEEEEEECCCCcHHHHHHHHc---------------CCCEEEeChh--
Confidence 79999888876 32 255555555432 25777766542 22221 11011 5555555421
Q ss_pred CCCCCCCcHHHHHHHHHHHhHHHHHHHHHHhHhcCCCccEEEecCCCc-chHHHHHHhCCceEEEec
Q 011789 84 LGFDRSLNHEQFMSSLLHVFSAHAEEVIGQIVRSGENVHCLIADTYFV-WPSKLAKKFGLYYISFWT 149 (477)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~pD~iI~D~~~~-~~~~~A~~~gIP~v~~~~ 149 (477)
...+ .....+.+.+.++.+ +||++|+-.+.. -...+-+.....++-+.+
T Consensus 62 ----~~~~--------r~~~d~~~~~~l~~~-----~~Dliv~agy~~Il~~~~l~~~~~~~iNiHp 111 (211)
T 3p9x_A 62 ----TYPS--------KEAYEIEVVQQLKEK-----QIDFVVLAGYMRLVGPTLLGAYEGRIVNIHP 111 (211)
T ss_dssp ----GSSS--------HHHHHHHHHHHHHHT-----TCCEEEESSCCSCCCHHHHHHHTTSEEEEES
T ss_pred ----hcCc--------hhhhHHHHHHHHHhc-----CCCEEEEeCchhhcCHHHHhhccCCeEEECC
Confidence 0001 011122333444554 999999876644 445555666656666633
No 370
>4gwg_A 6-phosphogluconate dehydrogenase, decarboxylating; 6-phosphoglyconate dehydrogenase, NADP, oxido; HET: MES; 1.39A {Homo sapiens} PDB: 4gwk_A* 2jkv_A* 2pgd_A 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A
Probab=23.66 E-value=47 Score=32.94 Aligned_cols=36 Identities=19% Similarity=0.407 Sum_probs=28.5
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCc
Q 011789 6 TQKPHAIFISYPLQGHVNPSVQLALKLASQGFTITFVNTHF 46 (477)
Q Consensus 6 ~~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~ 46 (477)
..||+|.|+-.|..| ..+|+.|+++||+|+++....
T Consensus 2 ~~~~kIgiIGlG~MG-----~~lA~~L~~~G~~V~v~dr~~ 37 (484)
T 4gwg_A 2 NAQADIALIGLAVMG-----QNLILNMNDHGFVVCAFNRTV 37 (484)
T ss_dssp -CCBSEEEECCSHHH-----HHHHHHHHHTTCCEEEECSST
T ss_pred CCCCEEEEEChhHHH-----HHHHHHHHHCCCEEEEEeCCH
Confidence 367899999888777 467999999999999885443
No 371
>3r6w_A FMN-dependent NADH-azoreductase 1; nitrofurazone, P. aeruginosa, nitroreductase, flavodoxin, oxidoreductase; HET: FMN NFZ; 2.08A {Pseudomonas aeruginosa} PDB: 3lt5_A* 2v9c_A* 3keg_A*
Probab=23.55 E-value=50 Score=28.26 Aligned_cols=37 Identities=3% Similarity=-0.033 Sum_probs=23.6
Q ss_pred CcEEEEEcCCCccC---HHHHH-HHHHHHHhC--CCeEEEEeC
Q 011789 8 KPHAIFISYPLQGH---VNPSV-QLALKLASQ--GFTITFVNT 44 (477)
Q Consensus 8 ~~~il~~~~~~~GH---~~p~l-~La~~L~~r--Gh~Vt~~~~ 44 (477)
||||+++...-.++ ..-++ .+++.|.++ ||+|+++--
T Consensus 1 MmkiLii~gSpr~~~s~t~~l~~~~~~~~~~~~~g~~v~~~dL 43 (212)
T 3r6w_A 1 MSRILAVHASPRGERSQSRRLAEVFLAAYREAHPQARVARREV 43 (212)
T ss_dssp CCCEEEEECCSCSTTCHHHHHHHHHHHHHHHHCTTCCEEEEES
T ss_pred CCEEEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCCeEEEEEC
Confidence 78888777665543 44333 346666666 899988643
No 372
>1zi8_A Carboxymethylenebutenolidase; alpha and beta proteins, 3-D structure, serine esterase, HYD aromatic hydrocarbons, catabolism; 1.40A {Pseudomonas putida} PDB: 1zj5_A* 1zi9_A 1zi6_A 1zj4_A* 1din_A 1ziy_A* 1zic_A 1zix_A 1ggv_A*
Probab=23.54 E-value=97 Score=26.02 Aligned_cols=38 Identities=16% Similarity=0.094 Sum_probs=30.6
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 011789 8 KPHAIFISYPLQGHVNPSVQLALKLASQGFTITFVNTH 45 (477)
Q Consensus 8 ~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 45 (477)
...++++.+|..|...-+..+++.|+++|+.|..+-.+
T Consensus 27 ~~p~vv~~hG~~~~~~~~~~~~~~l~~~g~~v~~~d~~ 64 (236)
T 1zi8_A 27 PAPVIVIAQDIFGVNAFMRETVSWLVDQGYAAVCPDLY 64 (236)
T ss_dssp SEEEEEEECCTTBSCHHHHHHHHHHHHTTCEEEEECGG
T ss_pred CCCEEEEEcCCCCCCHHHHHHHHHHHhCCcEEEecccc
Confidence 34567777888888888999999999999998776544
No 373
>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}
Probab=23.51 E-value=65 Score=30.10 Aligned_cols=36 Identities=6% Similarity=0.251 Sum_probs=26.0
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHhC-CCeEEEEeCCc
Q 011789 7 QKPHAIFISYPLQGHVNPSVQLALKLASQ-GFTITFVNTHF 46 (477)
Q Consensus 7 ~~~~il~~~~~~~GH~~p~l~La~~L~~r-Gh~Vt~~~~~~ 46 (477)
.||+|++. |+.|.+- ..|+++|.++ ||+|+.++...
T Consensus 23 ~~~~vlVt--GatG~iG--~~l~~~L~~~~g~~V~~~~r~~ 59 (372)
T 3slg_A 23 KAKKVLIL--GVNGFIG--HHLSKRILETTDWEVFGMDMQT 59 (372)
T ss_dssp CCCEEEEE--SCSSHHH--HHHHHHHHHHSSCEEEEEESCC
T ss_pred CCCEEEEE--CCCChHH--HHHHHHHHhCCCCEEEEEeCCh
Confidence 46777765 4555554 4678899998 99999987644
No 374
>3hn7_A UDP-N-acetylmuramate-L-alanine ligase; ATP-binding, nucleotide-binding, structural genomics, joint for structural genomics, JCSG; HET: MSE; 1.65A {Psychrobacter arcticus 273-4}
Probab=23.51 E-value=75 Score=31.77 Aligned_cols=34 Identities=24% Similarity=0.058 Sum_probs=29.2
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 011789 7 QKPHAIFISYPLQGHVNPSVQLALKLASQGFTITFVNT 44 (477)
Q Consensus 7 ~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 44 (477)
+.+||.|+-.++.| |-.+|+.|.++|++|+..=.
T Consensus 18 ~~~~i~~iGiGg~G----ms~lA~~l~~~G~~V~~sD~ 51 (524)
T 3hn7_A 18 QGMHIHILGICGTF----MGSLALLARALGHTVTGSDA 51 (524)
T ss_dssp -CCEEEEETTTSHH----HHHHHHHHHHTTCEEEEEES
T ss_pred cCCEEEEEEecHhh----HHHHHHHHHhCCCEEEEECC
Confidence 56899999999888 77899999999999998643
No 375
>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}
Probab=23.37 E-value=70 Score=28.96 Aligned_cols=36 Identities=19% Similarity=0.202 Sum_probs=25.0
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCc
Q 011789 7 QKPHAIFISYPLQGHVNPSVQLALKLASQGFTITFVNTHF 46 (477)
Q Consensus 7 ~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~ 46 (477)
.||+|++. |+.|.+- ..|++.|.++||+|+.++...
T Consensus 6 ~~~~vlVt--GatG~iG--~~l~~~L~~~g~~V~~~~r~~ 41 (321)
T 3vps_A 6 LKHRILIT--GGAGFIG--GHLARALVASGEEVTVLDDLR 41 (321)
T ss_dssp -CCEEEEE--TTTSHHH--HHHHHHHHHTTCCEEEECCCS
T ss_pred CCCeEEEE--CCCChHH--HHHHHHHHHCCCEEEEEecCC
Confidence 35677665 4445443 368899999999999987544
No 376
>3ot1_A 4-methyl-5(B-hydroxyethyl)-thiazole monophosphate biosynthesis enzyme; csgid, structural genomics; HET: MSE CSX; 1.16A {Vibrio cholerae o1 biovar el tor} SCOP: c.23.16.0
Probab=23.27 E-value=1.3e+02 Score=25.48 Aligned_cols=37 Identities=14% Similarity=0.056 Sum_probs=28.9
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCc
Q 011789 9 PHAIFISYPLQGHVNPSVQLALKLASQGFTITFVNTHF 46 (477)
Q Consensus 9 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~ 46 (477)
+||+|+..++.- ..-+....+.|...|++|++++...
T Consensus 10 ~~v~ill~~g~~-~~e~~~~~~~l~~ag~~v~~vs~~g 46 (208)
T 3ot1_A 10 KRILVPVAHGSE-EMETVIIVDTLVRAGFQVTMAAVGD 46 (208)
T ss_dssp CEEEEEECTTCC-HHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred CeEEEEECCCCc-HHHHHHHHHHHHHCCCEEEEEEcCC
Confidence 589888887654 4556666788888999999999853
No 377
>3hly_A Flavodoxin-like domain; Q5MZP6_SYNP6, flavoprotein, DFA1, SNR135D, NESG, structural genomics, PSI-2; 2.40A {Synechococcus elongatus pcc 6301}
Probab=23.19 E-value=96 Score=25.14 Aligned_cols=37 Identities=14% Similarity=0.136 Sum_probs=27.7
Q ss_pred cEEEEEcCCCccCHHHHHH-HHHHHHhCCCeEEEEeCC
Q 011789 9 PHAIFISYPLQGHVNPSVQ-LALKLASQGFTITFVNTH 45 (477)
Q Consensus 9 ~~il~~~~~~~GH~~p~l~-La~~L~~rGh~Vt~~~~~ 45 (477)
|||+++-...+|+..-+.. |++.|.+.|++|.++...
T Consensus 1 Mkv~IvY~S~tGnT~~~A~~ia~~l~~~g~~v~~~~~~ 38 (161)
T 3hly_A 1 MSVLIGYLSDYGYSDRLSQAIGRGLVKTGVAVEMVDLR 38 (161)
T ss_dssp -CEEEEECTTSTTHHHHHHHHHHHHHHTTCCEEEEETT
T ss_pred CEEEEEEECCChHHHHHHHHHHHHHHhCCCeEEEEECC
Confidence 5677666667899888765 688888899999887544
No 378
>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}
Probab=23.12 E-value=84 Score=28.43 Aligned_cols=34 Identities=9% Similarity=0.050 Sum_probs=24.1
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 011789 8 KPHAIFISYPLQGHVNPSVQLALKLASQGFTITFVNTH 45 (477)
Q Consensus 8 ~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 45 (477)
||+|++. |+.|-+- ..|++.|.++||+|+.++-.
T Consensus 2 ~~~vlVt--GatG~iG--~~l~~~L~~~g~~V~~~~r~ 35 (311)
T 3m2p_A 2 SLKIAVT--GGTGFLG--QYVVESIKNDGNTPIILTRS 35 (311)
T ss_dssp CCEEEEE--TTTSHHH--HHHHHHHHHTTCEEEEEESC
T ss_pred CCEEEEE--CCCcHHH--HHHHHHHHhCCCEEEEEeCC
Confidence 3576655 4444443 35789999999999998765
No 379
>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica}
Probab=23.09 E-value=83 Score=28.88 Aligned_cols=35 Identities=11% Similarity=0.213 Sum_probs=24.0
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 011789 7 QKPHAIFISYPLQGHVNPSVQLALKLASQGFTITFVNTH 45 (477)
Q Consensus 7 ~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 45 (477)
+||+|++. |+.|-+- ..|++.|.++||+|+.+...
T Consensus 20 ~~~~vlVT--GatG~iG--~~l~~~L~~~g~~V~~~~r~ 54 (333)
T 2q1w_A 20 HMKKVFIT--GICGQIG--SHIAELLLERGDKVVGIDNF 54 (333)
T ss_dssp -CCEEEEE--TTTSHHH--HHHHHHHHHTTCEEEEEECC
T ss_pred CCCEEEEe--CCccHHH--HHHHHHHHHCCCEEEEEECC
Confidence 56777665 3334333 46789999999999998754
No 380
>3tl4_X Glutaminyl-tRNA synthetase; glutamine, appended domain, hinge, tRNA LIG amidotransferase, ligase; 2.30A {Saccharomyces cerevisiae}
Probab=23.07 E-value=1.1e+02 Score=25.73 Aligned_cols=65 Identities=17% Similarity=0.224 Sum_probs=37.2
Q ss_pred hhHHHHHHhhhcceeeecCCCCcCHHHHHHHHHHHhcCCc--h--HHHHHHHHHHHHHHHH----HhcCCCchHHHHHHH
Q 011789 392 FTNRKLAVDDWNVGLNLSNEKVITKEEVSKNVHLLMGEKS--G--AKYRNAAKQVKKAMEY----ALQPNGSSDKNMDQF 463 (477)
Q Consensus 392 ~~na~~v~~~~G~G~~~~~~~~~~~~~l~~~i~~~l~~~~--~--~~~~~~a~~l~~~~~~----~~~~gg~~~~~~~~~ 463 (477)
.+.+..-++- |+|+.+ |+|++.+++.+.++... - +.|+ +.-.+-..++. -+.++......+++-
T Consensus 102 id~~~Fe~~c-GVGV~V------T~EqI~~~V~~~i~~~k~~i~~~RY~-~~g~ll~~vr~~p~LkWAd~~~vK~~vD~~ 173 (187)
T 3tl4_X 102 STKMGMNENS-GVGIEI------TEDQVRNYVMQYIQENKERILTERYK-LVPGIFADVKNLKELKWADPRSFKPIIDQE 173 (187)
T ss_dssp CCHHHHHHTT-TTTCCC------CHHHHHHHHHHHHHHTHHHHHHHGGG-GHHHHHHHHHTCGGGTTSCTTSHHHHHHHH
T ss_pred CCHHHHHHHC-CCCeEe------CHHHHHHHHHHHHHHhHHHHHHhccc-cHHHHHHHHhcccCCCCCCHHHHHHHHHHH
Confidence 3334444444 888888 99999999999985321 0 2355 55555555553 133444444455443
Q ss_pred H
Q 011789 464 I 464 (477)
Q Consensus 464 ~ 464 (477)
+
T Consensus 174 ~ 174 (187)
T 3tl4_X 174 V 174 (187)
T ss_dssp H
T ss_pred H
Confidence 3
No 381
>3rht_A (gatase1)-like protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MSE; 1.83A {Planctomyces limnophilus}
Probab=23.07 E-value=44 Score=29.99 Aligned_cols=39 Identities=10% Similarity=0.109 Sum_probs=27.8
Q ss_pred CCCcEEEEEcCCCccCHH--HHHHHHHHHHhCCCeEEEEeCCcch
Q 011789 6 TQKPHAIFISYPLQGHVN--PSVQLALKLASQGFTITFVNTHFIH 48 (477)
Q Consensus 6 ~~~~~il~~~~~~~GH~~--p~l~La~~L~~rGh~Vt~~~~~~~~ 48 (477)
.+|.++|++ .||-. -...|.+.|.+.|++|+++.+....
T Consensus 2 ~~m~~vLiV----~g~~~~~~a~~l~~aL~~~g~~V~~i~~~~~~ 42 (259)
T 3rht_A 2 NAMTRVLYC----GDTSLETAAGYLAGLMTSWQWEFDYIPSHVGL 42 (259)
T ss_dssp ----CEEEE----ESSCTTTTHHHHHHHHHHTTCCCEEECTTSCB
T ss_pred CCCceEEEE----CCCCchhHHHHHHHHHHhCCceEEEecccccc
Confidence 468899999 37744 3566888999999999999877653
No 382
>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6
Probab=23.05 E-value=66 Score=29.11 Aligned_cols=32 Identities=16% Similarity=0.376 Sum_probs=25.5
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 011789 9 PHAIFISYPLQGHVNPSVQLALKLASQGFTITFVNTH 45 (477)
Q Consensus 9 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 45 (477)
|||.|+-.|..|. .+++.|.+.||+|+++...
T Consensus 6 m~i~iiG~G~~G~-----~~a~~l~~~g~~V~~~~~~ 37 (299)
T 1vpd_A 6 MKVGFIGLGIMGK-----PMSKNLLKAGYSLVVSDRN 37 (299)
T ss_dssp CEEEEECCSTTHH-----HHHHHHHHTTCEEEEECSC
T ss_pred ceEEEECchHHHH-----HHHHHHHhCCCEEEEEeCC
Confidence 6999998877774 4688899999999877543
No 383
>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium}
Probab=22.93 E-value=91 Score=27.81 Aligned_cols=34 Identities=12% Similarity=0.152 Sum_probs=25.9
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 011789 9 PHAIFISYPLQGHVNPSVQLALKLASQGFTITFVNTH 45 (477)
Q Consensus 9 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 45 (477)
-|.++++.++.| =-..+|+.|+++|++|.++.-.
T Consensus 30 ~k~vlVTGas~G---IG~aia~~l~~~G~~Vi~~~r~ 63 (281)
T 3ppi_A 30 GASAIVSGGAGG---LGEATVRRLHADGLGVVIADLA 63 (281)
T ss_dssp TEEEEEETTTSH---HHHHHHHHHHHTTCEEEEEESC
T ss_pred CCEEEEECCCCh---HHHHHHHHHHHCCCEEEEEeCC
Confidence 367788877665 2357899999999999887654
No 384
>3l3b_A ES1 family protein; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ALS collaborative crystallography, isopr biosynthesis; 1.90A {Ehrlichia chaffeensis}
Probab=22.92 E-value=1.5e+02 Score=26.11 Aligned_cols=38 Identities=11% Similarity=0.069 Sum_probs=27.4
Q ss_pred cEEEEEcC-----CCccCHHHHHHHHHHHHhCCCeEEEEeCCcc
Q 011789 9 PHAIFISY-----PLQGHVNPSVQLALKLASQGFTITFVNTHFI 47 (477)
Q Consensus 9 ~~il~~~~-----~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~ 47 (477)
+||+|+.. ++. -..=+......|.+.|++|+++++...
T Consensus 24 kkV~ill~~~~~~dG~-e~~E~~~p~~vL~~aG~~V~~~S~~~g 66 (242)
T 3l3b_A 24 LNSAVILAGCGHMDGS-EIREAVLVMLELDRHNVNFKCFAPNKN 66 (242)
T ss_dssp CEEEEECCCSSTTTSC-CHHHHHHHHHHHHHTTCEEEEEECSSB
T ss_pred CEEEEEEecCCCCCCe-eHHHHHHHHHHHHHCCCEEEEEecCCC
Confidence 58988876 332 333455666888889999999998654
No 385
>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A*
Probab=22.88 E-value=86 Score=28.99 Aligned_cols=35 Identities=11% Similarity=0.098 Sum_probs=25.1
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 011789 7 QKPHAIFISYPLQGHVNPSVQLALKLASQGFTITFVNTH 45 (477)
Q Consensus 7 ~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 45 (477)
.||+|++. |+.|-+- ..|++.|.++||+|+.+...
T Consensus 26 ~~~~vlVt--GatG~iG--~~l~~~L~~~g~~V~~~~r~ 60 (352)
T 1sb8_A 26 QPKVWLIT--GVAGFIG--SNLLETLLKLDQKVVGLDNF 60 (352)
T ss_dssp SCCEEEEE--TTTSHHH--HHHHHHHHHTTCEEEEEECC
T ss_pred cCCeEEEE--CCCcHHH--HHHHHHHHHCCCEEEEEeCC
Confidence 56777665 4445443 46789999999999998753
No 386
>3foj_A Uncharacterized protein; protein SSP1007, structural genomics, PSI-2, protein structure initiative; 1.60A {Staphylococcus saprophyticus subsp}
Probab=22.74 E-value=1.6e+02 Score=21.30 Aligned_cols=38 Identities=16% Similarity=0.060 Sum_probs=26.4
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCcchhh
Q 011789 8 KPHAIFISYPLQGHVNPSVQLALKLASQGFTITFVNTHFIHQQ 50 (477)
Q Consensus 8 ~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~ 50 (477)
-.+|+++|..+ ......+..|.+.||+|..+. ..+...
T Consensus 56 ~~~ivvyC~~g----~rs~~a~~~L~~~G~~v~~l~-GG~~~W 93 (100)
T 3foj_A 56 NETYYIICKAG----GRSAQVVQYLEQNGVNAVNVE-GGMDEF 93 (100)
T ss_dssp TSEEEEECSSS----HHHHHHHHHHHTTTCEEEEET-THHHHH
T ss_pred CCcEEEEcCCC----chHHHHHHHHHHCCCCEEEec-ccHHHH
Confidence 36899998544 456778899999999776553 344433
No 387
>3orq_A N5-carboxyaminoimidazole ribonucleotide synthetas; ATP-grAsp superfamily, ligase,biosynthetic protein; HET: MSE ADP; 2.23A {Staphylococcus aureus subsp} PDB: 3orr_A
Probab=22.74 E-value=83 Score=29.76 Aligned_cols=40 Identities=10% Similarity=0.049 Sum_probs=29.7
Q ss_pred CCCCCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCcc
Q 011789 3 GNKTQKPHAIFISYPLQGHVNPSVQLALKLASQGFTITFVNTHFI 47 (477)
Q Consensus 3 ~~~~~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~ 47 (477)
.+...+++|+++-.|..|+ .+++++++.|++|.++.....
T Consensus 7 ~~~~~~~~IlIlG~G~lg~-----~la~aa~~lG~~viv~d~~~~ 46 (377)
T 3orq_A 7 NKLKFGATIGIIGGGQLGK-----MMAQSAQKMGYKVVVLDPSED 46 (377)
T ss_dssp CCCCTTCEEEEECCSHHHH-----HHHHHHHHTTCEEEEEESCTT
T ss_pred ccCCCCCEEEEECCCHHHH-----HHHHHHHHCCCEEEEEECCCC
Confidence 3445667999987766554 578999999999999865443
No 388
>1n7h_A GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, short-chain dehydrogenase/reductase, LYA; HET: NDP GDP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1n7g_A*
Probab=22.73 E-value=79 Score=29.65 Aligned_cols=36 Identities=14% Similarity=0.176 Sum_probs=22.8
Q ss_pred CC-cEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCc
Q 011789 7 QK-PHAIFISYPLQGHVNPSVQLALKLASQGFTITFVNTHF 46 (477)
Q Consensus 7 ~~-~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~ 46 (477)
.| ++|++ + |+.|-+- ..|++.|.++||+|+.+....
T Consensus 26 ~M~k~vlV-t-GatG~IG--~~l~~~L~~~g~~V~~~~r~~ 62 (381)
T 1n7h_A 26 EPRKIALI-T-GITGQDG--SYLTEFLLGKGYEVHGLIRRS 62 (381)
T ss_dssp --CCEEEE-E-TTTSHHH--HHHHHHHHHTTCEEEEEECCC
T ss_pred hhCCeEEE-E-cCCchHH--HHHHHHHHHCCCEEEEEecCC
Confidence 45 35544 3 3445443 467889999999999987543
No 389
>2qk4_A Trifunctional purine biosynthetic protein adenosi; purine synthesis, enzyme, protein-ATP complex, structural GE structural genomics consortium, SGC; HET: ATP; 2.45A {Homo sapiens}
Probab=22.61 E-value=2.4e+02 Score=27.10 Aligned_cols=31 Identities=23% Similarity=0.178 Sum_probs=22.6
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhC-CCeEEEEeC
Q 011789 9 PHAIFISYPLQGHVNPSVQLALKLASQ-GFTITFVNT 44 (477)
Q Consensus 9 ~~il~~~~~~~GH~~p~l~La~~L~~r-Gh~Vt~~~~ 44 (477)
|||+++..++ ...++++.|+++ |++++++.+
T Consensus 25 ~~IlIlG~g~-----r~~al~~~~a~~~g~~~v~~~~ 56 (452)
T 2qk4_A 25 ARVLIIGSGG-----REHTLAWKLAQSHHVKQVLVAP 56 (452)
T ss_dssp EEEEEEECSH-----HHHHHHHHHTTCTTEEEEEEEE
T ss_pred cEEEEECCCH-----HHHHHHHHHHhcCCCCEEEEEC
Confidence 7899988874 356778888765 888776654
No 390
>2gkg_A Response regulator homolog; social motility, receiver domain, signalling, high resolutio signaling protein; 1.00A {Myxococcus xanthus} PDB: 2i6f_A 2nt4_A 2nt3_A
Probab=22.60 E-value=1.1e+02 Score=22.67 Aligned_cols=48 Identities=10% Similarity=0.145 Sum_probs=34.2
Q ss_pred cCcceeccccccchhhHHHHHHhhhcceeeecCCCCcCHHHHHHHHHHHhcCC
Q 011789 378 CGVPLLCFPLYTDQFTNRKLAVDDWNVGLNLSNEKVITKEEVSKNVHLLMGEK 430 (477)
Q Consensus 378 ~GvP~v~~P~~~DQ~~na~~v~~~~G~G~~~~~~~~~~~~~l~~~i~~~l~~~ 430 (477)
..+|++++ ..++........+. |+--.+. +.++.++|.+.|+.++..+
T Consensus 79 ~~~~ii~~--~~~~~~~~~~~~~~-g~~~~l~--kp~~~~~l~~~i~~~~~~~ 126 (127)
T 2gkg_A 79 KNVPIVII--GNPDGFAQHRKLKA-HADEYVA--KPVDADQLVERAGALIGFP 126 (127)
T ss_dssp TTSCEEEE--ECGGGHHHHHHSTT-CCSEEEE--SSCCHHHHHHHHHHHHCCC
T ss_pred cCCCEEEE--ecCCchhHHHHHHh-Ccchhee--CCCCHHHHHHHHHHHHcCC
Confidence 46898888 44445555666677 7755552 4789999999999988643
No 391
>1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A*
Probab=22.57 E-value=86 Score=27.38 Aligned_cols=33 Identities=21% Similarity=0.182 Sum_probs=23.1
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 011789 9 PHAIFISYPLQGHVNPSVQLALKLASQGFTITFVNT 44 (477)
Q Consensus 9 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 44 (477)
||.++++.++.| + -..+++.|+++|++|+++.-
T Consensus 1 mk~vlVTGas~g-I--G~~~a~~l~~~G~~V~~~~r 33 (257)
T 1fjh_A 1 MSIIVISGCATG-I--GAATRKVLEAAGHQIVGIDI 33 (257)
T ss_dssp CCEEEEETTTSH-H--HHHHHHHHHHTTCEEEEEES
T ss_pred CCEEEEeCCCCH-H--HHHHHHHHHHCCCEEEEEeC
Confidence 455666655442 2 35789999999999988754
No 392
>2q6t_A DNAB replication FORK helicase; hydrolase; 2.90A {Thermus aquaticus}
Probab=22.53 E-value=2.6e+02 Score=27.01 Aligned_cols=42 Identities=17% Similarity=0.231 Sum_probs=34.1
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHh-CCCeEEEEeCCcchhhh
Q 011789 10 HAIFISYPLQGHVNPSVQLALKLAS-QGFTITFVNTHFIHQQM 51 (477)
Q Consensus 10 ~il~~~~~~~GH~~p~l~La~~L~~-rGh~Vt~~~~~~~~~~~ 51 (477)
-+++...|+.|=..-.+.+|...+. .|..|.|++.....+.+
T Consensus 202 l~ii~G~pg~GKT~lal~ia~~~a~~~g~~vl~~slE~~~~~l 244 (444)
T 2q6t_A 202 LNIIAARPAMGKTAFALTIAQNAALKEGVGVGIYSLEMPAAQL 244 (444)
T ss_dssp EEEEEECTTSCHHHHHHHHHHHHHHTTCCCEEEEESSSCHHHH
T ss_pred EEEEEeCCCCCHHHHHHHHHHHHHHhCCCeEEEEECCCCHHHH
Confidence 4677777899999999999999887 48999999987655433
No 393
>3nbm_A PTS system, lactose-specific IIBC components; PTS_IIB_LACTOSE, phosphoenolpyruvate:carbohydrate system, P- phosphorylation; HET: MSE; 1.30A {Streptococcus pneumoniae}
Probab=22.51 E-value=1e+02 Score=23.29 Aligned_cols=39 Identities=0% Similarity=-0.083 Sum_probs=24.9
Q ss_pred CCCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEe
Q 011789 5 KTQKPHAIFISYPLQGHVNPSVQLALKLASQGFTITFVN 43 (477)
Q Consensus 5 ~~~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~ 43 (477)
..++|||+++|.+|.+=-.=.-.+-++..++|.+|.+..
T Consensus 3 ~~~~mkIlL~C~aGmSTsllv~km~~~a~~~gi~v~i~a 41 (108)
T 3nbm_A 3 ASKELKVLVLCAGSGTSAQLANAINEGANLTEVRVIANS 41 (108)
T ss_dssp --CCEEEEEEESSSSHHHHHHHHHHHHHHHHTCSEEEEE
T ss_pred cccCceEEEECCCCCCHHHHHHHHHHHHHHCCCceEEEE
Confidence 457899999999886443333344444446798888854
No 394
>3bch_A 40S ribosomal protein SA; laminin receptor, P40 ribosomal protein, acetylation, cytoplasm, phosphorylation, polymorphism; 2.15A {Homo sapiens}
Probab=22.50 E-value=71 Score=28.42 Aligned_cols=31 Identities=19% Similarity=0.112 Sum_probs=24.2
Q ss_pred CccEEE-ecCCCc-chHHHHHHhCCceEEEecc
Q 011789 120 NVHCLI-ADTYFV-WPSKLAKKFGLYYISFWTE 150 (477)
Q Consensus 120 ~pD~iI-~D~~~~-~~~~~A~~~gIP~v~~~~~ 150 (477)
.||+|| +|+..- .+..=|.++|||.|.++-+
T Consensus 151 ~PdlliV~Dp~~e~~AI~EA~~lgIPvIalvDT 183 (253)
T 3bch_A 151 EPRLLVVTDPRADHQPLTEASYVNLPTIALCNT 183 (253)
T ss_dssp SCSEEEESCTTTTHHHHHHHHHTTCCEEEEECT
T ss_pred CCCEEEEECCCccchHHHHHHHhCCCEEEEEcC
Confidence 789877 565443 6788899999999999654
No 395
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=22.43 E-value=67 Score=28.72 Aligned_cols=32 Identities=22% Similarity=0.180 Sum_probs=24.8
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 011789 9 PHAIFISYPLQGHVNPSVQLALKLASQGFTITFVNTH 45 (477)
Q Consensus 9 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 45 (477)
|||.|+-.|..|. .+++.|.+.||+|+++...
T Consensus 1 m~i~iiG~G~~G~-----~~a~~l~~~g~~V~~~~~~ 32 (279)
T 2f1k_A 1 MKIGVVGLGLIGA-----SLAGDLRRRGHYLIGVSRQ 32 (279)
T ss_dssp CEEEEECCSHHHH-----HHHHHHHHTTCEEEEECSC
T ss_pred CEEEEEcCcHHHH-----HHHHHHHHCCCEEEEEECC
Confidence 6888887766663 5788899999999887543
No 396
>1rcu_A Conserved hypothetical protein VT76; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.50A {Thermotoga maritima} SCOP: c.129.1.1
Probab=22.42 E-value=1.3e+02 Score=25.67 Aligned_cols=45 Identities=11% Similarity=0.184 Sum_probs=31.7
Q ss_pred CCcEEEEEcCCC---c----cCHHHHHHHHHHHHhCCCeEEEEeCCcchhhh
Q 011789 7 QKPHAIFISYPL---Q----GHVNPSVQLALKLASQGFTITFVNTHFIHQQM 51 (477)
Q Consensus 7 ~~~~il~~~~~~---~----GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~~ 51 (477)
.|++|.+++... . -...-...|++.|+++|+.|..-........+
T Consensus 22 ~m~~IaV~Gss~~~~~~~~~~~~~~A~~lg~~LA~~G~~vVsGg~~GiM~aa 73 (195)
T 1rcu_A 22 HMKKVVVVGYSGPVNKSPVSELRDICLELGRTLAKKGYLVFNGGRDGVMELV 73 (195)
T ss_dssp -CCEEEEEECCSCTTSTTTGGGHHHHHHHHHHHHHTTCEEEECCSSHHHHHH
T ss_pred CCCeEEEEecCCCCCccccHHHHHHHHHHHHHHHHCCCEEEeCCHHHHHHHH
Confidence 456899998743 2 45677899999999999998885444443333
No 397
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=22.40 E-value=75 Score=25.97 Aligned_cols=34 Identities=21% Similarity=0.192 Sum_probs=26.9
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCc
Q 011789 8 KPHAIFISYPLQGHVNPSVQLALKLASQGFTITFVNTHF 46 (477)
Q Consensus 8 ~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~ 46 (477)
|.+|+++-.|..| +.+|..|+++|++|+++....
T Consensus 1 ~~~vvIIGgG~~G-----l~~A~~l~~~g~~v~lie~~~ 34 (180)
T 2ywl_A 1 MWDVIVVGGGPSG-----LSAALFLARAGLKVLVLDGGR 34 (180)
T ss_dssp CEEEEEECCSHHH-----HHHHHHHHHTTCCEEEEECSC
T ss_pred CCeEEEECCCHHH-----HHHHHHHHHCCCcEEEEeCCC
Confidence 4577777766544 788999999999999998654
No 398
>1tmy_A CHEY protein, TMY; chemotaxis, phosphoryl transfer, signal transduction; 1.90A {Thermotoga maritima} SCOP: c.23.1.1 PDB: 2tmy_A 3tmy_A 4tmy_A 1u0s_Y
Probab=22.14 E-value=1.4e+02 Score=21.75 Aligned_cols=32 Identities=9% Similarity=-0.080 Sum_probs=21.9
Q ss_pred CccEEEecCCCc--chHHHHHHh-----CCceEEEecch
Q 011789 120 NVHCLIADTYFV--WPSKLAKKF-----GLYYISFWTES 151 (477)
Q Consensus 120 ~pD~iI~D~~~~--~~~~~A~~~-----gIP~v~~~~~~ 151 (477)
+||+||.|.... .+..+.+.+ ++|.+.++...
T Consensus 47 ~~dlil~D~~l~~~~g~~~~~~l~~~~~~~~ii~~s~~~ 85 (120)
T 1tmy_A 47 KPDIVTMDITMPEMNGIDAIKEIMKIDPNAKIIVCSAMG 85 (120)
T ss_dssp CCSEEEEECSCGGGCHHHHHHHHHHHCTTCCEEEEECTT
T ss_pred CCCEEEEeCCCCCCcHHHHHHHHHhhCCCCeEEEEeCCC
Confidence 899999997654 345555433 58888876543
No 399
>1oi4_A Hypothetical protein YHBO; PFPI/THIJ family, complete proteome, PFPI, THIJ, bacterial targets at IGS-CNRS, france, BIGS, structural genomics; 2.03A {Escherichia coli} SCOP: c.23.16.2
Probab=22.10 E-value=1.8e+02 Score=24.18 Aligned_cols=40 Identities=5% Similarity=-0.071 Sum_probs=30.6
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCcc
Q 011789 7 QKPHAIFISYPLQGHVNPSVQLALKLASQGFTITFVNTHFI 47 (477)
Q Consensus 7 ~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~ 47 (477)
.|+||+|+.+++..- .-+....+.|...|++|++++....
T Consensus 22 ~~~kV~ill~~g~~~-~e~~~~~~~l~~ag~~v~~vs~~~~ 61 (193)
T 1oi4_A 22 LSKKIAVLITDEFED-SEFTSPADEFRKAGHEVITIEKQAG 61 (193)
T ss_dssp CCCEEEEECCTTBCT-HHHHHHHHHHHHTTCEEEEEESSTT
T ss_pred cCCEEEEEECCCCCH-HHHHHHHHHHHHCCCEEEEEECCCC
Confidence 467999999876653 3455667788889999999987653
No 400
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=21.88 E-value=1e+02 Score=30.02 Aligned_cols=33 Identities=18% Similarity=0.220 Sum_probs=27.2
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 011789 7 QKPHAIFISYPLQGHVNPSVQLALKLASQGFTITFVNT 44 (477)
Q Consensus 7 ~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 44 (477)
..+||+|+-.|..| +++|+.|.++||+|+..=.
T Consensus 8 ~~k~v~viG~G~sG-----~s~A~~l~~~G~~V~~~D~ 40 (451)
T 3lk7_A 8 ENKKVLVLGLARSG-----EAAARLLAKLGAIVTVNDG 40 (451)
T ss_dssp TTCEEEEECCTTTH-----HHHHHHHHHTTCEEEEEES
T ss_pred CCCEEEEEeeCHHH-----HHHHHHHHhCCCEEEEEeC
Confidence 45799999997766 3469999999999999754
No 401
>2ab0_A YAJL; DJ-1/THIJ superfamily, alpha-beta hydrolase fold, unknown function; 1.10A {Escherichia coli} SCOP: c.23.16.2
Probab=21.87 E-value=1.6e+02 Score=24.83 Aligned_cols=39 Identities=15% Similarity=0.043 Sum_probs=30.2
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCcc
Q 011789 8 KPHAIFISYPLQGHVNPSVQLALKLASQGFTITFVNTHFI 47 (477)
Q Consensus 8 ~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~ 47 (477)
|+||+|+..++.. ..-+....+.|...|++|++++....
T Consensus 2 ~~kV~ill~~g~~-~~e~~~~~~~l~~ag~~v~~vs~~~~ 40 (205)
T 2ab0_A 2 SASALVCLAPGSE-ETEAVTTIDLLVRGGIKVTTASVASD 40 (205)
T ss_dssp CCEEEEEECTTCC-HHHHHHHHHHHHHTTCEEEEEECSST
T ss_pred CcEEEEEEcCCCc-HHHHHHHHHHHHHCCCEEEEEeCCCC
Confidence 4689988887663 45566677889999999999987654
No 402
>3a10_A Response regulator; phosphoacceptor, signaling protein; HET: MSE PG4; 1.63A {Thermotoga maritima} PDB: 3a0r_B* 3a0u_A*
Probab=21.83 E-value=1.9e+02 Score=20.85 Aligned_cols=31 Identities=16% Similarity=0.016 Sum_probs=20.6
Q ss_pred CccEEEecCCCc--chHHHHHHh-----CCceEEEecc
Q 011789 120 NVHCLIADTYFV--WPSKLAKKF-----GLYYISFWTE 150 (477)
Q Consensus 120 ~pD~iI~D~~~~--~~~~~A~~~-----gIP~v~~~~~ 150 (477)
+||++|.|.... .+..+.+.+ .+|.+.++..
T Consensus 45 ~~dlvl~D~~l~~~~g~~~~~~l~~~~~~~~ii~~s~~ 82 (116)
T 3a10_A 45 NYDLVILDIEMPGISGLEVAGEIRKKKKDAKIILLTAY 82 (116)
T ss_dssp CCSEEEECSCCSSSCHHHHHHHHHHHCTTCCEEEEESC
T ss_pred CCCEEEEECCCCCCCHHHHHHHHHccCCCCeEEEEECC
Confidence 899999997654 345444433 4788777543
No 403
>3gt7_A Sensor protein; structural genomics, signal receiver domain, kinase, PSI-2, protein structure initiative; 2.30A {Syntrophus aciditrophicus SB}
Probab=21.83 E-value=1.4e+02 Score=23.44 Aligned_cols=31 Identities=13% Similarity=-0.043 Sum_probs=21.3
Q ss_pred CccEEEecCCCc--chHHHHHH-------hCCceEEEecc
Q 011789 120 NVHCLIADTYFV--WPSKLAKK-------FGLYYISFWTE 150 (477)
Q Consensus 120 ~pD~iI~D~~~~--~~~~~A~~-------~gIP~v~~~~~ 150 (477)
+||+||.|.... .+..+++. .++|++.++..
T Consensus 51 ~~dlii~D~~l~~~~g~~~~~~lr~~~~~~~~pii~~s~~ 90 (154)
T 3gt7_A 51 RPDLIISDVLMPEMDGYALCRWLKGQPDLRTIPVILLTIL 90 (154)
T ss_dssp CCSEEEEESCCSSSCHHHHHHHHHHSTTTTTSCEEEEECC
T ss_pred CCCEEEEeCCCCCCCHHHHHHHHHhCCCcCCCCEEEEECC
Confidence 899999997654 44554443 36888887653
No 404
>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*
Probab=21.79 E-value=66 Score=29.66 Aligned_cols=37 Identities=16% Similarity=0.122 Sum_probs=23.5
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCc
Q 011789 6 TQKPHAIFISYPLQGHVNPSVQLALKLASQGFTITFVNTHF 46 (477)
Q Consensus 6 ~~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~ 46 (477)
..+|+|++. |+.|.+-. .|++.|.++||+|+.+....
T Consensus 17 ~~~~~vlVt--GatG~iG~--~l~~~L~~~G~~V~~~~r~~ 53 (347)
T 4id9_A 17 RGSHMILVT--GSAGRVGR--AVVAALRTQGRTVRGFDLRP 53 (347)
T ss_dssp ----CEEEE--TTTSHHHH--HHHHHHHHTTCCEEEEESSC
T ss_pred cCCCEEEEE--CCCChHHH--HHHHHHHhCCCEEEEEeCCC
Confidence 345666655 45555543 57899999999999886543
No 405
>3md9_A Hemin-binding periplasmic protein HMUT; transport protein, alpha beta protein, rigid helical backbon substrate-free, heme transport; 1.50A {Yersinia pestis} PDB: 3nu1_A*
Probab=21.78 E-value=82 Score=27.64 Aligned_cols=28 Identities=7% Similarity=0.025 Sum_probs=21.3
Q ss_pred CccEEEecCCCc--chHHHHHHhCCceEEE
Q 011789 120 NVHCLIADTYFV--WPSKLAKKFGLYYISF 147 (477)
Q Consensus 120 ~pD~iI~D~~~~--~~~~~A~~~gIP~v~~ 147 (477)
+||+||+..... ....--++.|||++.+
T Consensus 59 ~PDlIi~~~~~~~~~~~~~L~~~gipvv~~ 88 (255)
T 3md9_A 59 KPTMLLVSELAQPSLVLTQIASSGVNVVTV 88 (255)
T ss_dssp CCSEEEEETTCSCHHHHHHHHHTTCEEEEE
T ss_pred CCCEEEEcCCcCchhHHHHHHHcCCcEEEe
Confidence 999999887553 2345557889999987
No 406
>1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2
Probab=21.73 E-value=87 Score=28.60 Aligned_cols=37 Identities=16% Similarity=0.204 Sum_probs=24.4
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCc
Q 011789 6 TQKPHAIFISYPLQGHVNPSVQLALKLASQGFTITFVNTHF 46 (477)
Q Consensus 6 ~~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~ 46 (477)
..+|+|++. |+.|-+- ..|++.|.++||+|+.+....
T Consensus 12 ~~~~~vlVT--GatG~iG--~~l~~~L~~~g~~V~~~~r~~ 48 (335)
T 1rpn_A 12 SMTRSALVT--GITGQDG--AYLAKLLLEKGYRVHGLVARR 48 (335)
T ss_dssp ---CEEEEE--TTTSHHH--HHHHHHHHHTTCEEEEEECCC
T ss_pred ccCCeEEEE--CCCChHH--HHHHHHHHHCCCeEEEEeCCC
Confidence 345676654 4445443 468899999999999987543
No 407
>1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenas oxidoreductase (CHOH(D)-NAD+(A)); HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1
Probab=21.71 E-value=45 Score=30.67 Aligned_cols=34 Identities=21% Similarity=0.188 Sum_probs=25.9
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhCC--CeEEEEeCCc
Q 011789 8 KPHAIFISYPLQGHVNPSVQLALKLASQG--FTITFVNTHF 46 (477)
Q Consensus 8 ~~~il~~~~~~~GH~~p~l~La~~L~~rG--h~Vt~~~~~~ 46 (477)
||||.++-.|..|.. +|..|+.+| |+|+++....
T Consensus 1 m~kI~VIGaG~~G~~-----la~~L~~~g~~~~V~l~d~~~ 36 (309)
T 1hyh_A 1 ARKIGIIGLGNVGAA-----VAHGLIAQGVADDYVFIDANE 36 (309)
T ss_dssp CCEEEEECCSHHHHH-----HHHHHHHHTCCSEEEEECSSH
T ss_pred CCEEEEECCCHHHHH-----HHHHHHhCCCCCEEEEEcCCH
Confidence 589999876555543 788888889 8999987654
No 408
>2h31_A Multifunctional protein ADE2; alpha-beta-alpha, ligase, lyase; 2.80A {Homo sapiens}
Probab=21.61 E-value=5.5e+02 Score=24.70 Aligned_cols=140 Identities=9% Similarity=0.070 Sum_probs=73.0
Q ss_pred CCcEEEEEecccccCCHHHHHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCchhHHHhcCCCeEEEeeccHHHhhccC-C
Q 011789 281 KGSVLYVSFGSYAHVSKRDLIEIANGIAKSKVTFIWILRPDIVSSDDPNPLPEDFKKEVADRSMIITWCCQTSVLAHP-A 359 (477)
Q Consensus 281 ~~~~I~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~lp~~~~~~~~~nv~v~~~~p~~~lL~~~-~ 359 (477)
..+.|-|-+||.+ +....++....++..|..+-+.+.+. ...|+...+- +-+.+- ... .
T Consensus 264 ~~~~V~Ii~gs~S--D~~~~~~a~~~l~~~gi~~~v~V~sa-------HR~p~~~~~~----------~~~~~~-~g~~~ 323 (425)
T 2h31_A 264 SQCRVVVLMGSTS--DLGHCEKIKKACGNFGIPCELRVTSA-------HKGPDETLRI----------KAEYEG-DGIPT 323 (425)
T ss_dssp CCCEEEEEESCGG--GHHHHHHHHHHHHHTTCCEEEEECCT-------TTCHHHHHHH----------HHHHHT-TCCCE
T ss_pred CCCeEEEEecCcc--cHHHHHHHHHHHHHcCCceEEeeeec-------cCCHHHHHHH----------HHHHHH-CCCCe
Confidence 3456777778775 46667788888899998876665544 3455532110 000000 012 2
Q ss_pred CCccccccCCchhhHHH---hcCcceeccccccchhhHHHH--HHh--hhcceeeecCCCCcCHHHHHHHHHHHhcCCch
Q 011789 360 IGGFLTHCGWNSVLEGL---WCGVPLLCFPLYTDQFTNRKL--AVD--DWNVGLNLSNEKVITKEEVSKNVHLLMGEKSG 432 (477)
Q Consensus 360 ~~~~ItHgG~gs~~eal---~~GvP~v~~P~~~DQ~~na~~--v~~--~~G~G~~~~~~~~~~~~~l~~~i~~~l~~~~~ 432 (477)
+ +|.=+|+-.-+-++ ..-+|+|.+|....-...... +.+ . |+.+..-. .-.++.-++..|. .+.|+
T Consensus 324 v--iIa~AG~~a~Lpgvva~~t~~PVIgvP~~~~~~G~daLls~vqmp~-g~pvatv~-~~~nAa~~A~~Il-~~~~~-- 396 (425)
T 2h31_A 324 V--FVAVAGRSNGLGPVMSGNTAYPVISCPPLTPDWGVQDVWSSLRLPS-GLGCSTVL-SPEGSAQFAAQIF-GLSNH-- 396 (425)
T ss_dssp E--EEEECCSSCCHHHHHHHHCSSCEEECCCCCTTTHHHHGGGTSSCCS-SCCCEECC-CHHHHHHHHHHHH-HTTCH--
T ss_pred E--EEEEcCcccchHhHHhccCCCCEEEeeCccccccHHHHHHHhcCCC-CCceEEec-CchHHHHHHHHHH-ccCCH--
Confidence 3 77766653222222 246799999974221112222 223 3 44432210 0233444443343 35677
Q ss_pred HHHHHHHHHHHHHHHH
Q 011789 433 AKYRNAAKQVKKAMEY 448 (477)
Q Consensus 433 ~~~~~~a~~l~~~~~~ 448 (477)
.++++.+..+..+..
T Consensus 397 -~l~~kl~~~~~~~~~ 411 (425)
T 2h31_A 397 -LVWSKLRASILNTWI 411 (425)
T ss_dssp -HHHHHHHHHHHHHHH
T ss_pred -HHHHHHHHHHHHHHH
Confidence 788888877777765
No 409
>4gdh_A DJ-1, uncharacterized protein C22E12.03C; unknown function, cysteine oxidation; 1.05A {Schizosaccharomyces pombe} PDB: 4ge3_A 4ge0_A
Probab=21.55 E-value=1e+02 Score=26.02 Aligned_cols=42 Identities=5% Similarity=-0.163 Sum_probs=27.7
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCcch
Q 011789 6 TQKPHAIFISYPLQGHVNPSVQLALKLASQGFTITFVNTHFIH 48 (477)
Q Consensus 6 ~~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~ 48 (477)
..||||+++-..+.=.+- ++.....|.+.|++|++++.....
T Consensus 2 s~M~kV~ill~dGfe~~E-~~~p~~vl~~ag~~v~~~s~~~~~ 43 (194)
T 4gdh_A 2 SHMVKVCLFVADGTDEIE-FSAPWGIFKRAEIPIDSVYVGENK 43 (194)
T ss_dssp ---CCEEEEEETTCCHHH-HHHHHHHHHHTTCCEEEEEESSCT
T ss_pred CCCCEEEEEECCCcCHHH-HHHHHHHHHHCCCeEEEEEEcCCC
Confidence 468999998887664433 344456678889999988765443
No 410
>1f4p_A Flavodoxin; electron transport, flavoprotein, FMN, 3D-STRCTURE, anisotropic refinement, redox protein; HET: FMN; 1.30A {Desulfovibrio vulgaris} SCOP: c.23.5.1 PDB: 1bu5_A* 1c7f_A* 1c7e_A* 1akr_A* 1fx1_A* 1akt_A* 1akq_A* 1aku_A* 1akv_A* 1azl_A* 1j8q_A* 2fx2_A* 3fx2_A* 4fx2_A* 5fx2_A* 1akw_A* 1i1o_A* 1wsw_A* 1wsb_A* 1xyv_A* ...
Probab=21.52 E-value=77 Score=24.99 Aligned_cols=36 Identities=19% Similarity=0.401 Sum_probs=24.5
Q ss_pred cEEEEEcCCCccCHHHHHH-HHHHHHhCCCeEEEEeC
Q 011789 9 PHAIFISYPLQGHVNPSVQ-LALKLASQGFTITFVNT 44 (477)
Q Consensus 9 ~~il~~~~~~~GH~~p~l~-La~~L~~rGh~Vt~~~~ 44 (477)
|||+++-....|+..-+.. |++.|.++|++|.++..
T Consensus 1 mki~iiy~S~~Gnt~~~a~~i~~~l~~~g~~v~~~~~ 37 (147)
T 1f4p_A 1 PKALIVYGSTTGNTEYTAETIARELADAGYEVDSRDA 37 (147)
T ss_dssp CEEEEEEECSSSHHHHHHHHHHHHHHHHTCEEEEEEG
T ss_pred CeEEEEEECCcCHHHHHHHHHHHHHHhcCCeeEEEeh
Confidence 5776666666787666554 46667778999987653
No 411
>2rjn_A Response regulator receiver:metal-dependent phosphohydrolase, HD subdomain; structural genomics, oceanospirillum SP. MED92; 2.10A {Neptuniibacter caesariensis}
Probab=21.43 E-value=1.5e+02 Score=22.98 Aligned_cols=43 Identities=7% Similarity=0.070 Sum_probs=0.0
Q ss_pred HHHHHHHhHhcCCCccEEEecCCCc--chHHHHHHh-----CCceEEEecch
Q 011789 107 AEEVIGQIVRSGENVHCLIADTYFV--WPSKLAKKF-----GLYYISFWTES 151 (477)
Q Consensus 107 ~~~ll~~~~~~~~~pD~iI~D~~~~--~~~~~A~~~-----gIP~v~~~~~~ 151 (477)
..+.+..+... .||+||.|.... .+..+.+.+ .+|++.++...
T Consensus 40 ~~~a~~~l~~~--~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~~ii~ls~~~ 89 (154)
T 2rjn_A 40 PLDALEALKGT--SVQLVISDMRMPEMGGEVFLEQVAKSYPDIERVVISGYA 89 (154)
T ss_dssp HHHHHHHHTTS--CCSEEEEESSCSSSCHHHHHHHHHHHCTTSEEEEEECGG
T ss_pred HHHHHHHHhcC--CCCEEEEecCCCCCCHHHHHHHHHHhCCCCcEEEEecCC
No 412
>3nhm_A Response regulator; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.19A {Myxococcus xanthus}
Probab=21.39 E-value=1.7e+02 Score=21.80 Aligned_cols=30 Identities=17% Similarity=-0.071 Sum_probs=19.9
Q ss_pred CccEEEecCCCc--chHHHHH---Hh----CCceEEEec
Q 011789 120 NVHCLIADTYFV--WPSKLAK---KF----GLYYISFWT 149 (477)
Q Consensus 120 ~pD~iI~D~~~~--~~~~~A~---~~----gIP~v~~~~ 149 (477)
+||+||.|.... .+..+.+ +. ++|++.++.
T Consensus 47 ~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~~~pii~~s~ 85 (133)
T 3nhm_A 47 PPDVLISDVNMDGMDGYALCGHFRSEPTLKHIPVIFVSG 85 (133)
T ss_dssp CCSEEEECSSCSSSCHHHHHHHHHHSTTTTTCCEEEEES
T ss_pred CCCEEEEeCCCCCCCHHHHHHHHHhCCccCCCCEEEEeC
Confidence 899999997644 3444433 22 688888754
No 413
>3pg5_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati northeast structural genomics consortium, NESG; 3.30A {Corynebacterium diphtheriae}
Probab=21.38 E-value=62 Score=30.49 Aligned_cols=39 Identities=21% Similarity=0.163 Sum_probs=30.2
Q ss_pred cEEEEEc-CCCccCHHHHHHHHHHHHhCCCeEEEEeCCcc
Q 011789 9 PHAIFIS-YPLQGHVNPSVQLALKLASQGFTITFVNTHFI 47 (477)
Q Consensus 9 ~~il~~~-~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~ 47 (477)
+.|+|+. -|+.|=.--.+.||..|+++|++|.++=....
T Consensus 2 kvIav~s~KGGvGKTT~a~nLA~~LA~~G~rVLlID~D~q 41 (361)
T 3pg5_A 2 RTISFFNNKGGVGKTTLSTNVAHYFALQGKRVLYVDCDPQ 41 (361)
T ss_dssp EEEEBCCSSCCHHHHHHHHHHHHHHHHTTCCEEEEECCTT
T ss_pred eEEEEEcCCCCCcHHHHHHHHHHHHHhCCCcEEEEEcCCC
Confidence 3444443 36888889999999999999999999865544
No 414
>1wrd_A TOM1, target of MYB protein 1; three-helix bundle, ubiquitin-binding protein, protein trans signaling protein complex; 1.75A {Homo sapiens} SCOP: a.7.8.1
Probab=21.28 E-value=1.4e+02 Score=22.39 Aligned_cols=48 Identities=8% Similarity=0.123 Sum_probs=28.7
Q ss_pred cCHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHhcCCCc---hHHHHHHHHHHHH
Q 011789 414 ITKEEVSKNVHLLMGEKSGAKYRNAAKQVKKAMEYALQPNGS---SDKNMDQFIKDLK 468 (477)
Q Consensus 414 ~~~~~l~~~i~~~l~~~~~~~~~~~a~~l~~~~~~~~~~gg~---~~~~~~~~~~~~~ 468 (477)
++++++.+...++- ..+.+++-+.+++... .||+. ....+.+|.+.++
T Consensus 3 ~~~eq~~k~~~el~------~v~~n~~lL~EML~~~-~p~~~~~~~~el~~eL~~~c~ 53 (103)
T 1wrd_A 3 LGSEQIGKLRSELE------MVSGNVRVMSEMLTEL-VPTQAEPADLELLQELNRTCR 53 (103)
T ss_dssp SSSTTHHHHHHHHH------HHHHHHHHHHHHHHHS-CTTTCCHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHH------HHHHHHHHHHHHHHhc-CCCCCCcccHHHHHHHHHHHH
Confidence 45666666665553 6888888888888763 55542 2234555555444
No 415
>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*
Probab=21.22 E-value=1.3e+02 Score=26.36 Aligned_cols=33 Identities=15% Similarity=0.223 Sum_probs=23.6
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 011789 10 HAIFISYPLQGHVNPSVQLALKLASQGFTITFVNTH 45 (477)
Q Consensus 10 ~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 45 (477)
|.++++.++.| + -..+++.|+++|++|.++...
T Consensus 10 k~vlVTGas~g-i--G~~ia~~l~~~G~~V~~~~r~ 42 (260)
T 2ae2_A 10 CTALVTGGSRG-I--GYGIVEELASLGASVYTCSRN 42 (260)
T ss_dssp CEEEEESCSSH-H--HHHHHHHHHHTTCEEEEEESC
T ss_pred CEEEEECCCcH-H--HHHHHHHHHHCCCEEEEEeCC
Confidence 55666665443 2 347899999999999987654
No 416
>2dzd_A Pyruvate carboxylase; biotin carboxylase, ligase; 2.40A {Geobacillus thermodenitrificans}
Probab=21.16 E-value=75 Score=30.98 Aligned_cols=35 Identities=6% Similarity=0.042 Sum_probs=25.6
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCcc
Q 011789 8 KPHAIFISYPLQGHVNPSVQLALKLASQGFTITFVNTHFI 47 (477)
Q Consensus 8 ~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~ 47 (477)
|+||+++.. |. -.+.+++++.+.|++|.++.+...
T Consensus 6 ~k~ILI~g~---g~--~~~~i~~a~~~~G~~vv~v~~~~~ 40 (461)
T 2dzd_A 6 IRKVLVANR---GE--IAIRVFRACTELGIRTVAIYSKED 40 (461)
T ss_dssp CSEEEECSC---HH--HHHHHHHHHHHHTCEEEEEECGGG
T ss_pred CcEEEEECC---cH--HHHHHHHHHHHcCCEEEEEECCcc
Confidence 467887732 32 357889999999999998876544
No 417
>3psh_A Protein HI_1472; substrate binding protein, periplasmic binding protein, MOLY binding protein, metal transport; 1.50A {Haemophilus influenzae} PDB: 3psa_A
Probab=21.12 E-value=78 Score=29.07 Aligned_cols=29 Identities=7% Similarity=0.007 Sum_probs=21.1
Q ss_pred CccEEEecCCCc-chHHHHHHhCCceEEEe
Q 011789 120 NVHCLIADTYFV-WPSKLAKKFGLYYISFW 148 (477)
Q Consensus 120 ~pD~iI~D~~~~-~~~~~A~~~gIP~v~~~ 148 (477)
+||+||...... ....--++.|||++.+.
T Consensus 84 ~PDlIi~~~~~~~~~~~~L~~~Gipvv~~~ 113 (326)
T 3psh_A 84 KPDVVFVTNYAPSEMIKQISDVNIPVVAIS 113 (326)
T ss_dssp CCSEEEEETTCCHHHHHHHHTTTCCEEEEC
T ss_pred CCCEEEEeCCCChHHHHHHHHcCCCEEEEe
Confidence 999999875432 33445577899999983
No 418
>2fb6_A Conserved hypothetical protein; structural genomics, PSI, protein STRU initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.46A {Bacteroides thetaiotaomicron}
Probab=21.11 E-value=1.2e+02 Score=23.33 Aligned_cols=42 Identities=12% Similarity=-0.031 Sum_probs=30.5
Q ss_pred cEEEEEcCCCccCH--HHHHHHHHHHHhCC--CeEEEEeCCcchhh
Q 011789 9 PHAIFISYPLQGHV--NPSVQLALKLASQG--FTITFVNTHFIHQQ 50 (477)
Q Consensus 9 ~~il~~~~~~~GH~--~p~l~La~~L~~rG--h~Vt~~~~~~~~~~ 50 (477)
||++|+-..+.-.. +-.+.+|....++| |+|.++........
T Consensus 8 ~K~~ivi~s~d~~~~~~~al~~A~~a~~~G~~~eV~i~~~G~~v~L 53 (117)
T 2fb6_A 8 DKLTILWTTDNKDTVFNMLAMYALNSKNRGWWKHINIILWGASVKL 53 (117)
T ss_dssp SEEEEEECCCCHHHHHHTHHHHHHHHHHHTSCSEEEEEECSHHHHH
T ss_pred CeEEEEEEcCChHHHHHHHHHHHHHHHHcCCCCcEEEEEECCeeee
Confidence 77777666543222 34677888999999 89999988877764
No 419
>1zgz_A Torcad operon transcriptional regulatory protein; two-component system, gene regulation, transcription factor, respiratory system; 1.80A {Escherichia coli} SCOP: c.23.1.1
Probab=21.07 E-value=1.6e+02 Score=21.51 Aligned_cols=32 Identities=16% Similarity=0.072 Sum_probs=22.0
Q ss_pred CccEEEecCCCc--chHHHHHHh----CCceEEEecch
Q 011789 120 NVHCLIADTYFV--WPSKLAKKF----GLYYISFWTES 151 (477)
Q Consensus 120 ~pD~iI~D~~~~--~~~~~A~~~----gIP~v~~~~~~ 151 (477)
+||++|.|.... .+..+++.+ .+|.+.++...
T Consensus 46 ~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~ii~~s~~~ 83 (122)
T 1zgz_A 46 SVDLILLDINLPDENGLMLTRALRERSTVGIILVTGRS 83 (122)
T ss_dssp CCSEEEEESCCSSSCHHHHHHHHHTTCCCEEEEEESSC
T ss_pred CCCEEEEeCCCCCCChHHHHHHHHhcCCCCEEEEECCC
Confidence 899999997654 455555554 57877776543
No 420
>2pju_A Propionate catabolism operon regulatory protein; structural genomics, PRPR, transcriptional regulation, PSI- 2, protein structure initiative; 2.10A {Escherichia coli} SCOP: c.92.3.1
Probab=21.05 E-value=69 Score=28.02 Aligned_cols=28 Identities=11% Similarity=0.088 Sum_probs=23.6
Q ss_pred CCCCccccccCCchhhHHHhcCcceeccccc
Q 011789 358 PAIGGFLTHCGWNSVLEGLWCGVPLLCFPLY 388 (477)
Q Consensus 358 ~~~~~~ItHgG~gs~~eal~~GvP~v~~P~~ 388 (477)
+++ +|+.||.+...... .++|+|-++..
T Consensus 64 ~dV--IISRGgta~~Lr~~-~~iPVV~I~vs 91 (225)
T 2pju_A 64 CDA--IIAAGSNGAYLKSR-LSVPVILIKPS 91 (225)
T ss_dssp CSE--EEEEHHHHHHHHTT-CSSCEEEECCC
T ss_pred CeE--EEeCChHHHHHHhh-CCCCEEEecCC
Confidence 555 99999999988875 57999999974
No 421
>1c0p_A D-amino acid oxidase; alpha-beta-alpha motif, flavin containing protein, oxidoreductase; HET: FAD; 1.20A {Rhodosporidium toruloides} SCOP: c.4.1.2 d.16.1.3 PDB: 1c0i_A* 1c0l_A* 1c0k_A*
Probab=21.02 E-value=86 Score=29.13 Aligned_cols=34 Identities=18% Similarity=0.411 Sum_probs=27.8
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 011789 7 QKPHAIFISYPLQGHVNPSVQLALKLASQGFTITFVNTH 45 (477)
Q Consensus 7 ~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 45 (477)
.+..|+++-.|..| +.+|.+|+++|++|+++-..
T Consensus 5 ~~~dVvVIG~Gi~G-----ls~A~~La~~G~~V~vle~~ 38 (363)
T 1c0p_A 5 SQKRVVVLGSGVIG-----LSSALILARKGYSVHILARD 38 (363)
T ss_dssp CSCEEEEECCSHHH-----HHHHHHHHHTTCEEEEEESS
T ss_pred CCCCEEEECCCHHH-----HHHHHHHHhCCCEEEEEecc
Confidence 45689999888666 67888999999999999654
No 422
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=20.95 E-value=83 Score=29.79 Aligned_cols=35 Identities=14% Similarity=0.256 Sum_probs=27.6
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 011789 6 TQKPHAIFISYPLQGHVNPSVQLALKLASQGFTITFVNTH 45 (477)
Q Consensus 6 ~~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 45 (477)
..+++|+++-.|--| +.+|..|+++|++|+++--.
T Consensus 3 ~~~~~V~IVGaG~aG-----l~~A~~L~~~G~~v~v~E~~ 37 (397)
T 2vou_A 3 PTTDRIAVVGGSISG-----LTAALMLRDAGVDVDVYERS 37 (397)
T ss_dssp CCCSEEEEECCSHHH-----HHHHHHHHHTTCEEEEECSS
T ss_pred CCCCcEEEECCCHHH-----HHHHHHHHhCCCCEEEEecC
Confidence 345789988877554 77899999999999999643
No 423
>3p0r_A Azoreductase; structural genomics, center for structural genomics of infec diseases, csgid, oxidoreductase; 1.80A {Bacillus anthracis}
Probab=20.92 E-value=79 Score=27.10 Aligned_cols=36 Identities=11% Similarity=0.123 Sum_probs=21.0
Q ss_pred CcEEEEEcCCCc-cCHHHHHH----HHHHHHhC--CCeEEEEe
Q 011789 8 KPHAIFISYPLQ-GHVNPSVQ----LALKLASQ--GFTITFVN 43 (477)
Q Consensus 8 ~~~il~~~~~~~-GH~~p~l~----La~~L~~r--Gh~Vt~~~ 43 (477)
||||+++...-+ |.-.-... +++.|.++ ||+|+++-
T Consensus 4 M~kiLiI~gSpr~~~~S~s~~l~~~~~~~~~~~~~g~ev~~~d 46 (211)
T 3p0r_A 4 MTKVLFVKANNRPAEQAVSVKLYEAFLASYKEAHPNDTVVELD 46 (211)
T ss_dssp CCEEEEEECCCSCTTTCHHHHHHHHHHHHHHHHCTTSEEEEEE
T ss_pred cCEEEEEEeCCCCCCCCHHHHHHHHHHHHHHHhCCCCeEEEEE
Confidence 789988776544 22222333 34555555 88888753
No 424
>4hn9_A Iron complex transport system substrate-binding P; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 1.85A {Eubacterium eligens}
Probab=20.91 E-value=67 Score=29.78 Aligned_cols=29 Identities=3% Similarity=0.006 Sum_probs=21.1
Q ss_pred CccEEEecCCCcchHHHHHHhCCceEEEe
Q 011789 120 NVHCLIADTYFVWPSKLAKKFGLYYISFW 148 (477)
Q Consensus 120 ~pD~iI~D~~~~~~~~~A~~~gIP~v~~~ 148 (477)
+||+||..........--++.|||++.+.
T Consensus 116 ~PDLIi~~~~~~~~~~~L~~~gipvv~~~ 144 (335)
T 4hn9_A 116 TPDVVFLPMKLKKTADTLESLGIKAVVVN 144 (335)
T ss_dssp CCSEEEEEGGGHHHHHHHHHTTCCEEEEC
T ss_pred CCCEEEEeCcchhHHHHHHHcCCCEEEEc
Confidence 99999987543233445577899999884
No 425
>3ihm_A Styrene monooxygenase A; rossman fold, anti-parallel beta strands, dimer, cavity, oxidoreductase; 2.30A {Pseudomonas putida}
Probab=20.88 E-value=55 Score=31.63 Aligned_cols=33 Identities=15% Similarity=0.165 Sum_probs=26.2
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCc
Q 011789 9 PHAIFISYPLQGHVNPSVQLALKLASQGFTITFVNTHF 46 (477)
Q Consensus 9 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~ 46 (477)
.+|+++-.|--| +.+|..|+++|++|+++--..
T Consensus 23 ~~ViIVGaGpaG-----l~~A~~La~~G~~V~viE~~~ 55 (430)
T 3ihm_A 23 KRIGIVGAGTAG-----LHLGLFLRQHDVDVTVYTDRK 55 (430)
T ss_dssp CEEEEECCHHHH-----HHHHHHHHHTTCEEEEEESCC
T ss_pred CCEEEECCcHHH-----HHHHHHHHHCCCeEEEEcCCC
Confidence 578888766544 678899999999999997544
No 426
>2dwc_A PH0318, 433AA long hypothetical phosphoribosylglycinamide transferase; purine ribonucleotide biosynthesis; HET: ADP; 1.70A {Pyrococcus horikoshii} PDB: 2czg_A*
Probab=20.76 E-value=1.6e+02 Score=28.15 Aligned_cols=39 Identities=8% Similarity=0.119 Sum_probs=28.4
Q ss_pred CCCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCcch
Q 011789 5 KTQKPHAIFISYPLQGHVNPSVQLALKLASQGFTITFVNTHFIH 48 (477)
Q Consensus 5 ~~~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~ 48 (477)
...+|||+++..+ .-...+++++.++||+|..+......
T Consensus 16 ~~~~~~ili~g~g-----~~g~~~~~a~~~~G~~v~~v~~~~~~ 54 (433)
T 2dwc_A 16 TDSAQKILLLGSG-----ELGKEIAIEAQRLGVEVVAVDRYANA 54 (433)
T ss_dssp STTCCEEEEESCS-----HHHHHHHHHHHHTTCEEEEEESSTTC
T ss_pred CCCCCEEEEECCC-----HHHHHHHHHHHHCCCEEEEEECCCCC
Confidence 3456799999553 23467789999999999988765443
No 427
>3trh_A Phosphoribosylaminoimidazole carboxylase carboxyltransferase subunit; purines, pyrimidines, nucleosides, nucleotides, lyase; 2.20A {Coxiella burnetii}
Probab=20.72 E-value=3.6e+02 Score=22.23 Aligned_cols=138 Identities=11% Similarity=0.099 Sum_probs=75.3
Q ss_pred cEEEEEecccccCCHHHHHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCchhHHHhcCCCeEEEeeccHHHhhccCCCCc
Q 011789 283 SVLYVSFGSYAHVSKRDLIEIANGIAKSKVTFIWILRPDIVSSDDPNPLPEDFKKEVADRSMIITWCCQTSVLAHPAIGG 362 (477)
Q Consensus 283 ~~I~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~lp~~~~~~~~~nv~v~~~~p~~~lL~~~~~~~ 362 (477)
+.|-|-+||.. +....++....++..|..+-+.+-+. ...|+...+- +-. .....+++
T Consensus 7 ~~V~IimgS~S--D~~v~~~a~~~l~~~gi~~ev~V~Sa-------HR~p~~~~~~----------~~~---a~~~g~~V 64 (169)
T 3trh_A 7 IFVAILMGSDS--DLSTMETAFTELKSLGIPFEAHILSA-------HRTPKETVEF----------VEN---ADNRGCAV 64 (169)
T ss_dssp CEEEEEESCGG--GHHHHHHHHHHHHHTTCCEEEEECCT-------TTSHHHHHHH----------HHH---HHHTTEEE
T ss_pred CcEEEEECcHH--hHHHHHHHHHHHHHcCCCEEEEEEcc-------cCCHHHHHHH----------HHH---HHhCCCcE
Confidence 45667777765 46667888888899988876666544 3455533211 000 00112234
Q ss_pred cccccCCchhhHHHh---cCcceecccccc-c--hhhHHHHHHh--hhccee--eecCCC---CcCHHHHHHHHHHHhcC
Q 011789 363 FLTHCGWNSVLEGLW---CGVPLLCFPLYT-D--QFTNRKLAVD--DWNVGL--NLSNEK---VITKEEVSKNVHLLMGE 429 (477)
Q Consensus 363 ~ItHgG~gs~~eal~---~GvP~v~~P~~~-D--Q~~na~~v~~--~~G~G~--~~~~~~---~~~~~~l~~~i~~~l~~ 429 (477)
+|.=.|.-.-+-++. .-+|+|.+|... + -.+--.-+.+ . |+.+ ... + -+++.-+...|. -+.|
T Consensus 65 iIa~AG~aa~LpgvvA~~t~~PVIgVP~~~~~l~G~dsLlS~vqmp~-GvPVatV~I--~~a~~~nAa~lAa~Il-~~~d 140 (169)
T 3trh_A 65 FIAAAGLAAHLAGTIAAHTLKPVIGVPMAGGSLGGLDALLSTVQMPG-GVPVACTAI--GKAGAKNAAILAAQII-ALQD 140 (169)
T ss_dssp EEEEECSSCCHHHHHHHTCSSCEEEEECCCSTTTTHHHHHHHHCCCT-TSCCEECCS--THHHHHHHHHHHHHHH-HTTC
T ss_pred EEEECChhhhhHHHHHhcCCCCEEEeecCCCCCCCHHHHHHhhcCCC-CCceEEEec--CCccchHHHHHHHHHH-cCCC
Confidence 777777643333333 346999999753 2 2222233343 3 5432 211 1 123333333332 3567
Q ss_pred CchHHHHHHHHHHHHHHHHH
Q 011789 430 KSGAKYRNAAKQVKKAMEYA 449 (477)
Q Consensus 430 ~~~~~~~~~a~~l~~~~~~~ 449 (477)
+ .++++.+..++++++.
T Consensus 141 ~---~l~~kl~~~r~~~~~~ 157 (169)
T 3trh_A 141 K---SIAQKLVQQRTAKRET 157 (169)
T ss_dssp H---HHHHHHHHHHHHHHHH
T ss_pred H---HHHHHHHHHHHHHHHH
Confidence 8 8999999998888763
No 428
>2wtm_A EST1E; hydrolase; 1.60A {Clostridium proteoclasticum} PDB: 2wtn_A*
Probab=20.65 E-value=1.2e+02 Score=25.99 Aligned_cols=37 Identities=16% Similarity=0.082 Sum_probs=28.6
Q ss_pred cEEEEEcCCCccC--HHHHHHHHHHHHhCCCeEEEEeCC
Q 011789 9 PHAIFISYPLQGH--VNPSVQLALKLASQGFTITFVNTH 45 (477)
Q Consensus 9 ~~il~~~~~~~GH--~~p~l~La~~L~~rGh~Vt~~~~~ 45 (477)
...+++.+|..|+ ..-+..+++.|.++|++|..+--+
T Consensus 27 ~p~vvl~HG~~~~~~~~~~~~~~~~l~~~g~~vi~~D~~ 65 (251)
T 2wtm_A 27 CPLCIIIHGFTGHSEERHIVAVQETLNEIGVATLRADMY 65 (251)
T ss_dssp EEEEEEECCTTCCTTSHHHHHHHHHHHHTTCEEEEECCT
T ss_pred CCEEEEEcCCCcccccccHHHHHHHHHHCCCEEEEecCC
Confidence 4567777787777 677888999999999998775433
No 429
>4f0j_A Probable hydrolytic enzyme; alpha/beta hydrolase fold, structural genomics, joint center structural genomics, JCSG; HET: MSE; 1.50A {Pseudomonas aeruginosa}
Probab=20.63 E-value=93 Score=27.39 Aligned_cols=39 Identities=13% Similarity=0.021 Sum_probs=29.8
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCcc
Q 011789 9 PHAIFISYPLQGHVNPSVQLALKLASQGFTITFVNTHFI 47 (477)
Q Consensus 9 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~ 47 (477)
...+++.+|..|+..-+..+++.|.++|++|..+-.+..
T Consensus 46 ~p~vv~~hG~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~ 84 (315)
T 4f0j_A 46 GRTILLMHGKNFCAGTWERTIDVLADAGYRVIAVDQVGF 84 (315)
T ss_dssp SCEEEEECCTTCCGGGGHHHHHHHHHTTCEEEEECCTTS
T ss_pred CCeEEEEcCCCCcchHHHHHHHHHHHCCCeEEEeecCCC
Confidence 345566667677777788999999999999987765543
No 430
>4ao6_A Esterase; hydrolase, thermo label; 1.60A {Unidentified} PDB: 4ao7_A 4ao8_A
Probab=20.53 E-value=82 Score=27.66 Aligned_cols=40 Identities=13% Similarity=0.052 Sum_probs=25.7
Q ss_pred CcEEEEEcCCCccCH--HHHHHHHHHHHhCCCeEEEEeCCcc
Q 011789 8 KPHAIFISYPLQGHV--NPSVQLALKLASQGFTITFVNTHFI 47 (477)
Q Consensus 8 ~~~il~~~~~~~GH~--~p~l~La~~L~~rGh~Vt~~~~~~~ 47 (477)
+.-++++.+|+.+|- .-+..+|+.|+++|+.|..+-.+..
T Consensus 55 ~~p~Vl~~HG~g~~~~~~~~~~~a~~la~~Gy~Vl~~D~rG~ 96 (259)
T 4ao6_A 55 SDRLVLLGHGGTTHKKVEYIEQVAKLLVGRGISAMAIDGPGH 96 (259)
T ss_dssp CSEEEEEEC--------CHHHHHHHHHHHTTEEEEEECCCC-
T ss_pred CCCEEEEeCCCcccccchHHHHHHHHHHHCCCeEEeeccCCC
Confidence 345788888888874 3478899999999999888765443
No 431
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=20.52 E-value=48 Score=30.33 Aligned_cols=36 Identities=11% Similarity=0.020 Sum_probs=27.7
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCc
Q 011789 6 TQKPHAIFISYPLQGHVNPSVQLALKLASQGFTITFVNTHF 46 (477)
Q Consensus 6 ~~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~ 46 (477)
+.+++|+++-.|.-| +..|..|+++|++|+++-...
T Consensus 20 ~~~~~vvIIG~G~aG-----l~aA~~l~~~g~~v~vie~~~ 55 (338)
T 3itj_A 20 HVHNKVTIIGSGPAA-----HTAAIYLARAEIKPILYEGMM 55 (338)
T ss_dssp -CEEEEEEECCSHHH-----HHHHHHHHHTTCCCEEECCSS
T ss_pred CCCCCEEEECcCHHH-----HHHHHHHHHCCCCEEEEecCC
Confidence 345788888777555 678999999999999997643
No 432
>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2
Probab=20.44 E-value=1e+02 Score=27.03 Aligned_cols=35 Identities=20% Similarity=0.398 Sum_probs=25.0
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCc
Q 011789 9 PHAIFISYPLQGHVNPSVQLALKLASQGFTITFVNTHF 46 (477)
Q Consensus 9 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~ 46 (477)
.|.++++.++.| + -..+++.|+++|++|.++....
T Consensus 2 ~k~vlVTGas~g-I--G~~ia~~l~~~G~~V~~~~r~~ 36 (256)
T 1geg_A 2 KKVALVTGAGQG-I--GKAIALRLVKDGFAVAIADYND 36 (256)
T ss_dssp CCEEEEETTTSH-H--HHHHHHHHHHTTCEEEEEESCH
T ss_pred CCEEEEECCCCh-H--HHHHHHHHHHCCCEEEEEeCCH
Confidence 456677765543 2 3578999999999999886543
No 433
>3q2o_A Phosphoribosylaminoimidazole carboxylase, ATPase; carboxylates, ATP binding, lyase; 1.96A {Bacillus anthracis} PDB: 3qff_A* 3r5h_A*
Probab=20.38 E-value=1.2e+02 Score=28.58 Aligned_cols=39 Identities=13% Similarity=0.025 Sum_probs=28.8
Q ss_pred CCCCCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCc
Q 011789 3 GNKTQKPHAIFISYPLQGHVNPSVQLALKLASQGFTITFVNTHF 46 (477)
Q Consensus 3 ~~~~~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~ 46 (477)
++....++|+++-.+.. -..+++++.+.|++|.++....
T Consensus 9 ~~~~~~k~IlIlG~G~~-----g~~la~aa~~~G~~vi~~d~~~ 47 (389)
T 3q2o_A 9 RIILPGKTIGIIGGGQL-----GRMMALAAKEMGYKIAVLDPTK 47 (389)
T ss_dssp CCCCTTSEEEEECCSHH-----HHHHHHHHHHTTCEEEEEESST
T ss_pred ccCCCCCEEEEECCCHH-----HHHHHHHHHHcCCEEEEEeCCC
Confidence 33445578999866543 5778999999999999986544
No 434
>4h15_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, nysgrc; HET: MSE; 1.45A {Sinorhizobium meliloti} PDB: 4h16_A*
Probab=20.37 E-value=1.5e+02 Score=26.39 Aligned_cols=32 Identities=9% Similarity=0.082 Sum_probs=26.1
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 011789 10 HAIFISYPLQGHVNPSVQLALKLASQGFTITFVNT 44 (477)
Q Consensus 10 ~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 44 (477)
|+++++.++.| ==.++|+.|+++|++|.+..-
T Consensus 12 K~alVTGas~G---IG~aia~~la~~Ga~V~~~~r 43 (261)
T 4h15_A 12 KRALITAGTKG---AGAATVSLFLELGAQVLTTAR 43 (261)
T ss_dssp CEEEESCCSSH---HHHHHHHHHHHTTCEEEEEES
T ss_pred CEEEEeccCcH---HHHHHHHHHHHcCCEEEEEEC
Confidence 78899988776 236789999999999988654
No 435
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=20.34 E-value=64 Score=32.04 Aligned_cols=36 Identities=6% Similarity=0.343 Sum_probs=28.4
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCc
Q 011789 6 TQKPHAIFISYPLQGHVNPSVQLALKLASQGFTITFVNTHF 46 (477)
Q Consensus 6 ~~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~ 46 (477)
..+.||+++-.|.-| +.+|+.|..+|++||++....
T Consensus 40 ~~KprVVIIGgG~AG-----l~~A~~L~~~~~~VtLId~~~ 75 (502)
T 4g6h_A 40 SDKPNVLILGSGWGA-----ISFLKHIDTKKYNVSIISPRS 75 (502)
T ss_dssp CSSCEEEEECSSHHH-----HHHHHHSCTTTCEEEEEESSS
T ss_pred CCCCCEEEECCcHHH-----HHHHHHhhhCCCcEEEECCCC
Confidence 346799998776544 578899999999999998654
No 436
>3g1w_A Sugar ABC transporter; sugar-binding protein, bacillus halod target 11229F, transport protein, structural genomics; 2.02A {Bacillus halodurans c-125}
Probab=20.26 E-value=4.4e+02 Score=23.10 Aligned_cols=28 Identities=14% Similarity=-0.012 Sum_probs=20.2
Q ss_pred CccEEEecCCCc----chHHHHHHhCCceEEE
Q 011789 120 NVHCLIADTYFV----WPSKLAKKFGLYYISF 147 (477)
Q Consensus 120 ~pD~iI~D~~~~----~~~~~A~~~gIP~v~~ 147 (477)
++|.||...... .....+...|||+|.+
T Consensus 61 ~vdgiIi~~~~~~~~~~~~~~~~~~~iPvV~~ 92 (305)
T 3g1w_A 61 NPAGIAISAIDPVELTDTINKAVDAGIPIVLF 92 (305)
T ss_dssp CCSEEEECCSSTTTTHHHHHHHHHTTCCEEEE
T ss_pred CCCEEEEcCCCHHHHHHHHHHHHHCCCcEEEE
Confidence 899999765433 2344567789999987
No 437
>1i24_A Sulfolipid biosynthesis protein SQD1; SDR, short-chain dehydrogenase/reductase, rossmann fold, BIO protein; HET: NAD UPG; 1.20A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1i2c_A* 1i2b_A* 1qrr_A*
Probab=20.13 E-value=95 Score=29.27 Aligned_cols=35 Identities=17% Similarity=0.305 Sum_probs=23.8
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 011789 6 TQKPHAIFISYPLQGHVNPSVQLALKLASQGFTITFVNT 44 (477)
Q Consensus 6 ~~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 44 (477)
+.|++|++. |+.|.+- ..|++.|.++||+|+.+..
T Consensus 9 ~~~~~vlVT--G~tGfIG--~~l~~~L~~~G~~V~~~~r 43 (404)
T 1i24_A 9 HHGSRVMVI--GGDGYCG--WATALHLSKKNYEVCIVDN 43 (404)
T ss_dssp ---CEEEEE--TTTSHHH--HHHHHHHHHTTCEEEEEEC
T ss_pred cCCCeEEEe--CCCcHHH--HHHHHHHHhCCCeEEEEEe
Confidence 567887765 4445554 4578999999999999864
No 438
>4ep4_A Crossover junction endodeoxyribonuclease RUVC; resolvase, hydrolase; 1.28A {Thermus thermophilus} PDB: 4ep5_A
Probab=20.12 E-value=2.7e+02 Score=22.84 Aligned_cols=42 Identities=14% Similarity=0.150 Sum_probs=30.6
Q ss_pred HHHHHHHHHHhHhcCCCccEEEecCCCcc---------------hHHHHHHhCCceEEEecc
Q 011789 104 SAHAEEVIGQIVRSGENVHCLIADTYFVW---------------PSKLAKKFGLYYISFWTE 150 (477)
Q Consensus 104 ~~~~~~ll~~~~~~~~~pD~iI~D~~~~~---------------~~~~A~~~gIP~v~~~~~ 150 (477)
...+.+++++. +||.+..+..++. +..++.+.|+|+.-+.|.
T Consensus 52 ~~~l~~~i~~~-----~Pd~vaiE~~F~~~n~~sal~lgqarGv~~la~~~~glpv~eytP~ 108 (166)
T 4ep4_A 52 HARVLEVLHRF-----RPEAVAVEEQFFYRQNELAYKVGWALGAVLVAAFEAGVPVYAYGPM 108 (166)
T ss_dssp HHHHHHHHHHH-----CCSEEEEECCCCSSCSHHHHHHHHHHHHHHHHHHHHTCCEEEECHH
T ss_pred HHHHHHHHHHh-----CCCEEEEeehhhccChHHHHHHHHHHHHHHHHHHHcCCCEEEECHH
Confidence 45567777776 9999998876641 234668899999888554
No 439
>4ffl_A PYLC; amino acid, biosynthesis of pyrrolysine, isopeptide bond for ATP-grAsp fold, ligase, ATP-binding, L-lysine and 3R-methyl ornithine; HET: LYS ADP ATP; 1.50A {Methanosarcina barkeri} PDB: 4ffm_A* 4ffn_A* 4ffo_A* 4ffp_A* 4ffr_A*
Probab=20.10 E-value=92 Score=29.10 Aligned_cols=34 Identities=18% Similarity=0.245 Sum_probs=25.7
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCc
Q 011789 8 KPHAIFISYPLQGHVNPSVQLALKLASQGFTITFVNTHF 46 (477)
Q Consensus 8 ~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~ 46 (477)
|+||+++-.+..| ..++.++++.|++|.++....
T Consensus 1 MK~I~ilGgg~~g-----~~~~~~Ak~~G~~vv~vd~~~ 34 (363)
T 4ffl_A 1 MKTICLVGGKLQG-----FEAAYLSKKAGMKVVLVDKNP 34 (363)
T ss_dssp CCEEEEECCSHHH-----HHHHHHHHHTTCEEEEEESCT
T ss_pred CCEEEEECCCHHH-----HHHHHHHHHCCCEEEEEeCCC
Confidence 7889998766444 457778888999999986544
No 440
>3k7m_X 6-hydroxy-L-nicotine oxidase; enantiomeric substrates, flavoenzymes, nicotine degradation, oxidoreductase; HET: FAD GP7; 1.95A {Arthrobacter nicotinovorans} PDB: 3k7q_X* 3ng7_X* 3ngc_X* 3nh3_X* 3nho_X* 3nk0_X* 3nk1_X* 3nk2_X* 3nn0_X* 3nn6_X* 3k7t_A*
Probab=20.06 E-value=61 Score=31.06 Aligned_cols=32 Identities=19% Similarity=0.272 Sum_probs=26.5
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 011789 8 KPHAIFISYPLQGHVNPSVQLALKLASQGFTITFVNT 44 (477)
Q Consensus 8 ~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 44 (477)
|++|+++-.|..| +..|..|+++|++|+++--
T Consensus 1 ~~dVvVIGaG~aG-----l~aA~~L~~~G~~V~vlE~ 32 (431)
T 3k7m_X 1 MYDAIVVGGGFSG-----LKAARDLTNAGKKVLLLEG 32 (431)
T ss_dssp CEEEEEECCBHHH-----HHHHHHHHHTTCCEEEECS
T ss_pred CCCEEEECCcHHH-----HHHHHHHHHcCCeEEEEec
Confidence 4678888777666 7889999999999999964
No 441
>3ka7_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: FAD; 1.80A {Methanosarcina mazei}
Probab=20.06 E-value=68 Score=30.59 Aligned_cols=32 Identities=19% Similarity=0.289 Sum_probs=25.9
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 011789 9 PHAIFISYPLQGHVNPSVQLALKLASQGFTITFVNTH 45 (477)
Q Consensus 9 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 45 (477)
|+|+++-.|..| +..|..|+++|++|+++--.
T Consensus 1 ~dVvVIGaGiaG-----LsaA~~La~~G~~V~vlE~~ 32 (425)
T 3ka7_A 1 MKTVVIGAGLGG-----LLSAARLSKAGHEVEVFERL 32 (425)
T ss_dssp CEEEEECCBHHH-----HHHHHHHHHTTCEEEEECSS
T ss_pred CcEEEECCCHHH-----HHHHHHHHhCCCceEEEeCC
Confidence 577887777666 78899999999999999643
No 442
>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0
Probab=20.06 E-value=1.1e+02 Score=28.00 Aligned_cols=34 Identities=15% Similarity=0.320 Sum_probs=23.4
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 011789 7 QKPHAIFISYPLQGHVNPSVQLALKLASQGFTITFVNT 44 (477)
Q Consensus 7 ~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 44 (477)
.+|+|++. |+.|-+- ..|++.|.++||+|+.+..
T Consensus 4 ~~~~vlVT--GatG~iG--~~l~~~L~~~G~~V~~~~r 37 (341)
T 3enk_A 4 TKGTILVT--GGAGYIG--SHTAVELLAHGYDVVIADN 37 (341)
T ss_dssp SSCEEEEE--TTTSHHH--HHHHHHHHHTTCEEEEECC
T ss_pred CCcEEEEe--cCCcHHH--HHHHHHHHHCCCcEEEEec
Confidence 34566554 3344443 4688999999999998864
No 443
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*
Probab=20.01 E-value=3.7e+02 Score=26.09 Aligned_cols=143 Identities=8% Similarity=-0.023 Sum_probs=76.1
Q ss_pred CCcEEEEEecccccCCHHHHHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCchhHHHhcC-CCeEEEeeccHHHhhccCC
Q 011789 281 KGSVLYVSFGSYAHVSKRDLIEIANGIAKSKVTFIWILRPDIVSSDDPNPLPEDFKKEVA-DRSMIITWCCQTSVLAHPA 359 (477)
Q Consensus 281 ~~~~I~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~lp~~~~~~~~-~nv~v~~~~p~~~lL~~~~ 359 (477)
.++++.|..|..+ ...+..|.+.|..+.+.-.. +.+.+.+-.. .++.+..---+...|..++
T Consensus 12 ~~~vlVvGgG~va-------~~k~~~L~~~ga~V~vi~~~----------~~~~~~~l~~~~~i~~~~~~~~~~~l~~~~ 74 (457)
T 1pjq_A 12 DRDCLIVGGGDVA-------ERKARLLLEAGARLTVNALT----------FIPQFTVWANEGMLTLVEGPFDETLLDSCW 74 (457)
T ss_dssp TCEEEEECCSHHH-------HHHHHHHHHTTBEEEEEESS----------CCHHHHHHHTTTSCEEEESSCCGGGGTTCS
T ss_pred CCEEEEECCCHHH-------HHHHHHHHhCcCEEEEEcCC----------CCHHHHHHHhcCCEEEEECCCCccccCCcc
Confidence 3468888777654 33455566678877665431 2223332222 3555543211223455566
Q ss_pred CCccccccCCch-----hhHHHhcCcceeccccccchhhHHHHH-----Hhhhc--ceeeecCCC-CcCHHHHHHHHHHH
Q 011789 360 IGGFLTHCGWNS-----VLEGLWCGVPLLCFPLYTDQFTNRKLA-----VDDWN--VGLNLSNEK-VITKEEVSKNVHLL 426 (477)
Q Consensus 360 ~~~~ItHgG~gs-----~~eal~~GvP~v~~P~~~DQ~~na~~v-----~~~~G--~G~~~~~~~-~~~~~~l~~~i~~~ 426 (477)
+ +|.--|.-. ..+|-..|+|+-+ .|++..+... .+. + +|+.-. .+ ..-+..|++.|+..
T Consensus 75 l--Vi~at~~~~~n~~i~~~a~~~~i~vn~----~d~~e~~~~~~pa~~~~~-~l~iaIsT~-Gksp~la~~ir~~ie~~ 146 (457)
T 1pjq_A 75 L--AIAATDDDTVNQRVSDAAESRRIFCNV----VDAPKAASFIMPSIIDRS-PLMVAVSSG-GTSPVLARLLREKLESL 146 (457)
T ss_dssp E--EEECCSCHHHHHHHHHHHHHTTCEEEE----TTCTTSSSEECCEEEEET-TEEEEEECT-TSCHHHHHHHHHHHHHH
T ss_pred E--EEEcCCCHHHHHHHHHHHHHcCCEEEE----CCCcccCceEeeeEEEeC-CeEEEEECC-CCChHHHHHHHHHHHHh
Confidence 5 777777654 4456677998622 2333333222 122 3 444421 11 22256678888888
Q ss_pred hcCCchHHHHHHHHHHHHHHHHH
Q 011789 427 MGEKSGAKYRNAAKQVKKAMEYA 449 (477)
Q Consensus 427 l~~~~~~~~~~~a~~l~~~~~~~ 449 (477)
|.+. ...+-+.+.+++++++..
T Consensus 147 l~~~-~~~~~~~~~~~R~~~~~~ 168 (457)
T 1pjq_A 147 LPQH-LGQVARYAGQLRARVKKQ 168 (457)
T ss_dssp SCTT-HHHHHHHHHHHHHHHHHH
T ss_pred cchh-HHHHHHHHHHHHHHHHhh
Confidence 7653 126777777888887765
Done!