BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 011792
(477 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|2PQ6|A Chain A, Crystal Structure Of Medicago Truncatula Ugt85h2- Insights
Into The Structural Basis Of A Multifunctional (Iso)
Flavonoid Glycosyltransferase
Length = 482
Score = 322 bits (826), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 189/485 (38%), Positives = 268/485 (55%), Gaps = 27/485 (5%)
Query: 4 TRVPHVVLLPFPAYGHIKPMLSLAKLFSHAGFRITFVNTDQYHDRLFGNTDVTAFYKHFP 63
R PHVV++P+P GHI P+ LAKL GF ITFVNT+ H RL + AF F
Sbjct: 6 NRKPHVVMIPYPVQGHINPLFKLAKLLHLRGFHITFVNTEYNHKRLLKSRGPKAF-DGFT 64
Query: 64 NFLCTSIPDGLPP---------DNPRFGIYTKDWFCSNKPVSKLAFRQLLMTPGRLPTCI 114
+F SIPDGL P D P + F KP +L R T TC+
Sbjct: 65 DFNFESIPDGLTPMEGDGDVSQDVPTLCQSVRKNFL--KPYCELLTRLNHSTNVPPVTCL 122
Query: 115 ISDSIMSFAIDVAEELNIPIITFRPYSAYCSWSDFHFSKLAEEGELPVTDENF------D 168
+SD MSF I AEE +P + + SA + HF E G +P DE++ +
Sbjct: 123 VSDCCMSFTIQAAEEFELPNVLYFSSSACSLLNVMHFRSFVERGIIPFKDESYLTNGCLE 182
Query: 169 KPVTCIPELENIFRNRDLPSICRHGGPDDPILQTFIRDTSATTRTSALVINTFNEIEGPI 228
V IP L+N FR +D+ R P+D +L+ FI + + +++NTFNE+E +
Sbjct: 183 TKVDWIPGLKN-FRLKDIVDFIRTTNPNDIMLEFFIEVADRVNKDTTILLNTFNELESDV 241
Query: 229 ISKLGSRLTKIYTVGPLHALLKSRIQEDSVESSPLESNNCVLSKEDRSCMTWLGSQPSRS 288
I+ L S + IY +GPL +LLK Q ++S L+SN L KED C+ WL S+ S
Sbjct: 242 INALSSTIPSIYPIGPLPSLLKQTPQIHQLDS--LDSN---LWKEDTECLDWLESKEPGS 296
Query: 289 VLYVSFGSFIKLSGDQILEFWHGIVNSGKGFLWVIRSDLIDGESGVGPVPAELDQGTKER 348
V+YV+FGS ++ +Q+LEF G+ N K FLW+IR DL+ G S + +E +R
Sbjct: 297 VVYVNFGSTTVMTPEQLLEFAWGLANCKKSFLWIIRPDLVIGGSVI--FSSEFTNEIADR 354
Query: 349 GCIVSWAPQEEVLAHQAIGGFLTHSGWNSTLESMVAGVPMICWPQVGDQQVNSRCVSEIW 408
G I SW PQ++VL H +IGGFLTH GWNST ES+ AGVPM+CWP DQ + R + W
Sbjct: 355 GLIASWCPQDKVLNHPSIGGFLTHCGWNSTTESICAGVPMLCWPFFADQPTDCRFICNEW 414
Query: 409 KIGFDMKDTCDRSTIEKLVRDLM-DNKRDKIMESTVQIAKMARDAVKEGGSSYRNLEKLI 467
+IG ++ R + KL+ +++ +K K+ + +++ K A + + GG SY NL K+I
Sbjct: 415 EIGMEIDTNVKREELAKLINEVIAGDKGKKMKQKAMELKKKAEENTRPGGCSYMNLNKVI 474
Query: 468 EDIRL 472
+D+ L
Sbjct: 475 KDVLL 479
>pdb|2VCE|A Chain A, Characterization And Engineering Of The Bifunctional N-
And O-glucosyltransferase Involved In Xenobiotic
Metabolism In Plants
pdb|2VCH|A Chain A, Characterization And Engineering Of The Bifunctional N-
And O-Glucosyltransferase Involved In Xenobiotic
Metabolism In Plants
pdb|2VG8|A Chain A, Characterization And Engineering Of The Bifunctional N-
And O-Glucosyltransferase Involved In Xenobiotic
Metabolism In Plants
Length = 480
Score = 185 bits (469), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 148/505 (29%), Positives = 228/505 (45%), Gaps = 87/505 (17%)
Query: 1 MEQTRVPHVVLLPFPAYGHIKPMLSLAKLFSHA-GFRITFVNTDQYHDRLFGNTDVTAFY 59
ME+++ PHV ++P P GH+ P++ AK H G +TFV + G +
Sbjct: 1 MEESKTPHVAIIPSPGMGHLIPLVEFAKRLVHLHGLTVTFV--------IAGEGPPSKAQ 52
Query: 60 KHFPNFLCTSIPDG-LPPDNPRFGIYTKDWFCSNKPVSKLAFRQLLMTP----------- 107
+ + L +SI LPP + D S + S+++ P
Sbjct: 53 RTVLDSLPSSISSVFLPP------VDLTDLSSSTRIESRISLTVTRSNPELRKVFDSFVE 106
Query: 108 -GRLPTCIISDSIMSFAIDVAEELNIPIITFRPYSAYCSWSDFHFSKLAEEGELPVTDEN 166
GRLPT ++ D + A DVA E ++P F P +A H KL
Sbjct: 107 GGRLPTALVVDLFGTDAFDVAVEFHVPPYIFYPTTANVLSFFLHLPKL------------ 154
Query: 167 FDKPVTCIPELENIFRNRDLPSICRHGGPD---------DPILQTFIRDTSATTRTSALV 217
D+ V+C E + LP G D D + + +T ++
Sbjct: 155 -DETVSC--EFRELTEPLMLPGCVPVAGKDFLDPAQDRKDDAYKWLLHNTKRYKEAEGIL 211
Query: 218 INTFNEIEGPIISKL---GSRLTKIYTVGPLHALLKSRIQEDSVESSPLESNNCVLSKED 274
+NTF E+E I L G +Y VGPL + K ++ E+
Sbjct: 212 VNTFFELEPNAIKALQEPGLDKPPVYPVGPLVNIGKQEAKQ----------------TEE 255
Query: 275 RSCMTWLGSQPSRSVLYVSFGSFIKLSGDQILEFWHGIVNSGKGFLWVIRS-------DL 327
C+ WL +QP SVLYVSFGS L+ +Q+ E G+ +S + FLWVIRS
Sbjct: 256 SECLKWLDNQPLGSVLYVSFGSGGTLTCEQLNELALGLADSEQRFLWVIRSPSGIANSSY 315
Query: 328 IDGESGVGPV---PAELDQGTKERGCIVS-WAPQEEVLAHQAIGGFLTHSGWNSTLESMV 383
D S P+ P + TK+RG ++ WAPQ +VLAH + GGFLTH GWNSTLES+V
Sbjct: 316 FDSHSQTDPLTFLPPGFLERTKKRGFVIPFWAPQAQVLAHPSTGGFLTHCGWNSTLESVV 375
Query: 384 AGVPMICWPQVGDQQVNSRCVSEIWKIGFDMKDTCD----RSTIEKLVRDLMDNKRDK-I 438
+G+P+I WP +Q++N+ +SE + + D R + ++V+ LM+ + K +
Sbjct: 376 SGIPLIAWPLYAEQKMNAVLLSEDIRAALRPRAGDDGLVRREEVARVVKGLMEGEEGKGV 435
Query: 439 MESTVQIAKMARDAVKEGGSSYRNL 463
++ + A +K+ G+S + L
Sbjct: 436 RNKMKELKEAACRVLKDDGTSTKAL 460
>pdb|2ACW|A Chain A, Crystal Structure Of Medicago Truncatula Ugt71g1 Complexed
With Udp-Glucose
pdb|2ACW|B Chain B, Crystal Structure Of Medicago Truncatula Ugt71g1 Complexed
With Udp-Glucose
Length = 465
Score = 164 bits (416), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 140/483 (28%), Positives = 217/483 (44%), Gaps = 52/483 (10%)
Query: 8 HVVLLPFPAYGHIKPMLSLAKLFS-HAGFRITFVNTDQYHDRLFGNTDVTAFYKHFPNFL 66
++ +P P GH+ L AKL + H V ++ F ++ + + P
Sbjct: 11 ELIFIPAPGIGHLASALEFAKLLTNHDKNLYITVFCIKFPGMPFADSYIKSVLASQPQIQ 70
Query: 67 CTSIPDGLPP-----DNPRFGIYTKDWFCSNKPVSKLAFRQLLMTPGRLPTCIISDSIMS 121
+P+ PP +P F I T + S P K + +L ++ D
Sbjct: 71 LIDLPEVEPPPQELLKSPEFYILT--FLESLIPHVKATIKTILSNK---VVGLVLDFFCV 125
Query: 122 FAIDVAEELNIPIITFRPYSAYCSWSDFHFSKLAEEGELPVTDENFDKPVTCIPELENIF 181
IDV E IP F ++ + S + E D + D + IP + N
Sbjct: 126 SMIDVGNEFGIPSYLF--LTSNVGFLSLMLSLKNRQIEEVFDDSDRDHQLLNIPGISNQV 183
Query: 182 RNRDLPSIC--RHGGPDDPILQTFIRDTSATTRTSALVINTFNEIEGPIISKL---GSRL 236
+ LP C + GG + + T +++NTF+++E I L ++
Sbjct: 184 PSNVLPDACFNKDGG-----YIAYYKLAERFRDTKGIIVNTFSDLEQSSIDALYDHDEKI 238
Query: 237 TKIYTVGPLHALLKSRIQEDSVESSPLESNNCVLSKEDRSCMTWLGSQPSRSVLYVSFGS 296
IY VGPL L + P N + + + WL QP +SV+++ FGS
Sbjct: 239 PPIYAVGPLLDL----------KGQP---NPKLDQAQHDLILKWLDEQPDKSVVFLCFGS 285
Query: 297 F-IKLSGDQILEFWHGIVNSGKGFLWVIRSDLIDGESGVGPVPAELDQGTKERGCIVSWA 355
+ QI E G+ +SG FLW + E V P + +G I WA
Sbjct: 286 MGVSFGPSQIREIALGLKHSGVRFLWSNSA-----EKKVFPEGFLEWMELEGKGMICGWA 340
Query: 356 PQEEVLAHQAIGGFLTHSGWNSTLESMVAGVPMICWPQVGDQQVNSRCVSEIWKIGFDMK 415
PQ EVLAH+AIGGF++H GWNS LESM GVP++ WP +QQ+N+ + + W +G ++
Sbjct: 341 PQVEVLAHKAIGGFVSHCGWNSILESMWFGVPILTWPIYAEQQLNAFRLVKEWGVGLGLR 400
Query: 416 -------DTCDRSTIEKLVRDLMDNKRDKIMESTVQ-IAKMARDAVKEGGSSYRNLEKLI 467
D IEK ++DLMD +D I+ VQ + +M+R+AV +GGSS ++ KLI
Sbjct: 401 VDYRKGSDVVAAEEIEKGLKDLMD--KDSIVHKKVQEMKEMSRNAVVDGGSSLISVGKLI 458
Query: 468 EDI 470
+DI
Sbjct: 459 DDI 461
>pdb|2ACV|A Chain A, Crystal Structure Of Medicago Truncatula Ugt71g1
pdb|2ACV|B Chain B, Crystal Structure Of Medicago Truncatula Ugt71g1
Length = 463
Score = 164 bits (416), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 140/483 (28%), Positives = 217/483 (44%), Gaps = 52/483 (10%)
Query: 8 HVVLLPFPAYGHIKPMLSLAKLFS-HAGFRITFVNTDQYHDRLFGNTDVTAFYKHFPNFL 66
++ +P P GH+ L AKL + H V ++ F ++ + + P
Sbjct: 11 ELIFIPAPGIGHLASALEFAKLLTNHDKNLYITVFCIKFPGMPFADSYIKSVLASQPQIQ 70
Query: 67 CTSIPDGLPP-----DNPRFGIYTKDWFCSNKPVSKLAFRQLLMTPGRLPTCIISDSIMS 121
+P+ PP +P F I T + S P K + +L ++ D
Sbjct: 71 LIDLPEVEPPPQELLKSPEFYILT--FLESLIPHVKATIKTILSNK---VVGLVLDFFCV 125
Query: 122 FAIDVAEELNIPIITFRPYSAYCSWSDFHFSKLAEEGELPVTDENFDKPVTCIPELENIF 181
IDV E IP F ++ + S + E D + D + IP + N
Sbjct: 126 SMIDVGNEFGIPSYLF--LTSNVGFLSLMLSLKNRQIEEVFDDSDRDHQLLNIPGISNQV 183
Query: 182 RNRDLPSIC--RHGGPDDPILQTFIRDTSATTRTSALVINTFNEIEGPIISKL---GSRL 236
+ LP C + GG + + T +++NTF+++E I L ++
Sbjct: 184 PSNVLPDACFNKDGG-----YIAYYKLAERFRDTKGIIVNTFSDLEQSSIDALYDHDEKI 238
Query: 237 TKIYTVGPLHALLKSRIQEDSVESSPLESNNCVLSKEDRSCMTWLGSQPSRSVLYVSFGS 296
IY VGPL L + P N + + + WL QP +SV+++ FGS
Sbjct: 239 PPIYAVGPLLDL----------KGQP---NPKLDQAQHDLILKWLDEQPDKSVVFLCFGS 285
Query: 297 F-IKLSGDQILEFWHGIVNSGKGFLWVIRSDLIDGESGVGPVPAELDQGTKERGCIVSWA 355
+ QI E G+ +SG FLW + E V P + +G I WA
Sbjct: 286 MGVSFGPSQIREIALGLKHSGVRFLWSNSA-----EKKVFPEGFLEWMELEGKGMICGWA 340
Query: 356 PQEEVLAHQAIGGFLTHSGWNSTLESMVAGVPMICWPQVGDQQVNSRCVSEIWKIGFDMK 415
PQ EVLAH+AIGGF++H GWNS LESM GVP++ WP +QQ+N+ + + W +G ++
Sbjct: 341 PQVEVLAHKAIGGFVSHCGWNSILESMWFGVPILTWPIYAEQQLNAFRLVKEWGVGLGLR 400
Query: 416 -------DTCDRSTIEKLVRDLMDNKRDKIMESTVQ-IAKMARDAVKEGGSSYRNLEKLI 467
D IEK ++DLMD +D I+ VQ + +M+R+AV +GGSS ++ KLI
Sbjct: 401 VDYRKGSDVVAAEEIEKGLKDLMD--KDSIVHKKVQEMKEMSRNAVVDGGSSLISVGKLI 458
Query: 468 EDI 470
+DI
Sbjct: 459 DDI 461
>pdb|3HBF|A Chain A, Structure Of Ugt78g1 Complexed With Myricetin And Udp
pdb|3HBJ|A Chain A, Structure Of Ugt78g1 Complexed With Udp
Length = 454
Score = 162 bits (411), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 134/489 (27%), Positives = 222/489 (45%), Gaps = 67/489 (13%)
Query: 1 MEQTRVPHVVLLPFPAYGHIKPMLSLAKLFSHAGFRITFVNTDQY--HDRLFGNTDVTAF 58
M + HV +L FP H P+LSL K + ++TF +D LF ++
Sbjct: 8 MNGNNLLHVAVLAFPFGTHAAPLLSLVKKIATEAPKVTFSFFCTTTTNDTLFSRSN---- 63
Query: 59 YKHFPNFLCTSIPDGLPPD-----NPRFGIYTKDWFCSNKPVSKLAFRQLLMTPGRLPTC 113
+ PN ++ DGLP NPR I+ + + + K + + G+ TC
Sbjct: 64 -EFLPNIKYYNVHDGLPKGYVSSGNPREPIFL--FIKAMQENFKHVIDEAVAETGKNITC 120
Query: 114 IISDSIMSFAIDVAEELN---IPIITFRPYSAYCS-WSDFHFSKLAEEGELPVTDENFDK 169
+++D+ F D+AEE++ +P+ T P+S ++D K G V D
Sbjct: 121 LVTDAFFWFGADLAEEMHAKWVPLWTAGPHSLLTHVYTDLIREK---TGSKEVHDVKSID 177
Query: 170 PVTCIPEL------ENIFRNRDLP--SICRHGGPDDPILQTFIRDTSATTRTSALVINTF 221
+ PEL E + ++ D+P ++ G + P R +A+ IN+F
Sbjct: 178 VLPGFPELKASDLPEGVIKDIDVPFATMLHKMGLELP-------------RANAVAINSF 224
Query: 222 NEIEGPIISKLGSRLTKIYTVGPLHALLKSRIQEDSVESSPLESNNCVLSKEDRSCMTWL 281
I I ++L S+ + VGP + R D + C+ WL
Sbjct: 225 ATIHPLIENELNSKFKLLLNVGPFNLTTPQRKVSD-----------------EHGCLEWL 267
Query: 282 GSQPSRSVLYVSFGSFIKLSGDQILEFWHGIVNSGKGFLWVIRSDLIDGESGVGPVPAEL 341
+ SV+Y+SFGS + ++ + G F+W R D + +P
Sbjct: 268 DQHENSSVVYISFGSVVTPPPHELTALAESLEECGFPFIWSFRGDPKE------KLPKGF 321
Query: 342 DQGTKERGCIVSWAPQEEVLAHQAIGGFLTHSGWNSTLESMVAGVPMICWPQVGDQQVNS 401
+ TK +G IV+WAPQ E+L H ++G FLTHSGWNS LE +V GVPMI P GDQ +N+
Sbjct: 322 LERTKTKGKIVAWAPQVEILKHSSVGVFLTHSGWNSVLECIVGGVPMISRPFFGDQGLNT 381
Query: 402 RCVSEIWKIGFDMKD-TCDRSTIEKLVRDLMDNKRDKIM-ESTVQIAKMARDAVKEGGSS 459
+ +IG + + + +I+K + M +++ IM + V++ + A AV++ G+S
Sbjct: 382 ILTESVLEIGVGVDNGVLTKESIKKALELTMSSEKGGIMRQKIVKLKESAFKAVEQNGTS 441
Query: 460 YRNLEKLIE 468
+ LI+
Sbjct: 442 AMDFTTLIQ 450
>pdb|2C1X|A Chain A, Structure And Activity Of A Flavonoid 3-O
Glucosyltransferase Reveals The Basis For Plant Natural
Product Modification
pdb|2C1Z|A Chain A, Structure And Activity Of A Flavonoid 3-O
Glucosyltransferase Reveals The Basis For Plant Natural
Product Modification
pdb|2C9Z|A Chain A, Structure And Activity Of A Flavonoid 3-0
Glucosyltransferase Reveals The Basis For Plant Natural
Product Modification
Length = 456
Score = 151 bits (381), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 127/481 (26%), Positives = 215/481 (44%), Gaps = 46/481 (9%)
Query: 1 MEQTRV-PHVVLLPFPAYGHIKPMLSLAKLFS----HAGFRITFVNTDQYHDRLFGNTDV 55
M QT PHV +L FP H P+L++ + + HA F +F +T Q + +F ++
Sbjct: 1 MSQTTTNPHVAVLAFPFSTHAAPLLAVVRRLAAAAPHAVF--SFFSTSQSNASIFHDS-- 56
Query: 56 TAFYKHFPNFLCTSIPDGLPPDNPRFGIYTKD--WFCSNKPVSKLAFRQLLMTP----GR 109
+ N I DG+P G +D F P S FRQ ++ GR
Sbjct: 57 --MHTMQCNIKSYDISDGVPEGYVFAGRPQEDIELFTRAAPES---FRQGMVMAVAETGR 111
Query: 110 LPTCIISDSIMSFAIDVAEELNIPIITFRPYSAYCSWSDFHFSKLAEEGELPVTDENFDK 169
+C+++D+ + FA D+A E+ + + F + + ++ E+ + D+
Sbjct: 112 PVSCLVADAFIWFAADMAAEMGVAWLPFWTAGPNSLSTHVYIDEIREKIGVSGIQGREDE 171
Query: 170 PVTCIPELENIFRNRDLPSICRHGGPDDPILQTFIRDTSATTRTSALVINTFNEIEGPII 229
+ IP + + R RDL G + + R + +A+ IN+F E++ +
Sbjct: 172 LLNFIPGMSKV-RFRDLQEGIVFGNLNSLFSRMLHRMGQVLPKATAVFINSFEELDDSLT 230
Query: 230 SKLGSRLTKIYTVGPLHALLKSRIQEDSVESSPLESNNCVLSKEDRSCMTWLGSQPSRSV 289
+ L S+L +GP + + P+ N C+ WL + SV
Sbjct: 231 NDLKSKLKTYLNIGPFNL----------ITPPPVVPNTT-------GCLQWLKERKPTSV 273
Query: 290 LYVSFGSFIKLSGDQILEFWHGIVNSGKGFLWVIRSDLIDGESGVGPVPAELDQGTKERG 349
+Y+SFG+ +++ + S F+W +R + +P + T+ G
Sbjct: 274 VYISFGTVTTPPPAEVVALSEALEASRVPFIWSLR------DKARVHLPEGFLEKTRGYG 327
Query: 350 CIVSWAPQEEVLAHQAIGGFLTHSGWNSTLESMVAGVPMICWPQVGDQQVNSRCVSEIWK 409
+V WAPQ EVLAH+A+G F+TH GWNS ES+ GVP+IC P GDQ++N R V ++ +
Sbjct: 328 MVVPWAPQAEVLAHEAVGAFVTHCGWNSLWESVAGGVPLICRPFFGDQRLNGRMVEDVLE 387
Query: 410 IGFDMKDTC--DRSTIEKLVRDLMDNKRDKIMESTVQIAKMARDAVKEGGSSYRNLEKLI 467
IG ++ + + L K K+ E+ + + A AV GSS N L+
Sbjct: 388 IGVRIEGGVFTKSGLMSCFDQILSQEKGKKLRENLRALRETADRAVGPKGSSTENFITLV 447
Query: 468 E 468
+
Sbjct: 448 D 448
>pdb|2IYA|A Chain A, The Crystal Structure Of Macrolide Glycosyltransferases: A
Blueprint For Antibiotic Engineering
pdb|2IYA|B Chain B, The Crystal Structure Of Macrolide Glycosyltransferases: A
Blueprint For Antibiotic Engineering
Length = 424
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 73/156 (46%), Gaps = 20/156 (12%)
Query: 274 DRSCM-TWLGSQPSRSVLYVSFGSFIKLSGDQILEFWHGIVNSGKGFLW--VIRSDLIDG 330
DRS TW G R VL ++ GS L+F+ +++ G W V+
Sbjct: 241 DRSHQGTWEGPGDGRPVLLIALGSAFT----DHLDFYRTCLSAVDGLDWHVVLSVGRFVD 296
Query: 331 ESGVGPVPAELDQGTKERGCIVSWAPQEEVLAHQAIGGFLTHSGWNSTLESMVAGVPMIC 390
+ +G VP ++ + W PQ ++L + F+TH+G ST+E++ VPM+
Sbjct: 297 PADLGEVPPNVE--------VHQWVPQLDILTKAS--AFITHAGMGSTMEALSNAVPMVA 346
Query: 391 WPQVGDQQVNSRCVSEIWKIGFDMKDTCDRSTIEKL 426
PQ+ +Q +N+ + E +G D+ T EKL
Sbjct: 347 VPQIAEQTMNAERIVE---LGLGRHIPRDQVTAEKL 379
Score = 32.0 bits (71), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 10/38 (26%), Positives = 20/38 (52%)
Query: 8 HVVLLPFPAYGHIKPMLSLAKLFSHAGFRITFVNTDQY 45
H+ P +GH+ P L + + G R+++ TD++
Sbjct: 14 HISFFNIPGHGHVNPSLGIVQELVARGHRVSYAITDEF 51
>pdb|2O6L|A Chain A, Crystal Structure Of The Udp-Glucuronic Acid Binding
Domain Of The Human Drug Metabolizing
Udp-Glucuronosyltransferase 2b7
pdb|2O6L|B Chain B, Crystal Structure Of The Udp-Glucuronic Acid Binding
Domain Of The Human Drug Metabolizing
Udp-Glucuronosyltransferase 2b7
Length = 170
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 20/83 (24%), Positives = 39/83 (46%), Gaps = 4/83 (4%)
Query: 351 IVSWAPQEEVLAHQAIGGFLTHSGWNSTLESMVAGVPMICWPQVGDQQVN---SRCVSEI 407
+ W PQ ++L H F+TH G N E++ G+P + P DQ N +
Sbjct: 72 LYKWIPQNDLLGHPKTRAFITHGGANGIYEAIYHGIPXVGIPLFADQPDNIAHXKARGAA 131
Query: 408 WKIGFDMKDTCD-RSTIEKLVRD 429
++ F+ + D + +++++ D
Sbjct: 132 VRVDFNTXSSTDLLNALKRVIND 154
>pdb|3OTG|A Chain A, Crystal Structure Of Calg1, Calicheamicin
Glycostyltransferase, Tdp Bound Form
pdb|3OTH|A Chain A, Crystal Structure Of Calg1, Calicheamicin
Glycostyltransferase, Tdp And Calicheamicin Alpha3i
Bound Form
pdb|3OTH|B Chain B, Crystal Structure Of Calg1, Calicheamicin
Glycostyltransferase, Tdp And Calicheamicin Alpha3i
Bound Form
Length = 412
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 58/128 (45%), Gaps = 19/128 (14%)
Query: 273 EDRSCMTWLGSQ-PSRSVLYVSFGSFIKLSGDQILEFWHGIVNSGKGF---LWVIRSDLI 328
E WL S+ +R ++Y++ G+ S +E ++ G + V +
Sbjct: 227 EQGDLPAWLSSRDTARPLVYLTLGT----SSGGTVEVLRAAIDGLAGLDADVLVASGPSL 282
Query: 329 DGESGVGPVPAELDQGTKERGCIVSWAPQEEVLAHQAIGGFLTHSGWNSTLESMVAGVPM 388
D SG+G VPA + + SW PQ +L H + + H G +TL ++ AGVP
Sbjct: 283 D-VSGLGEVPANVR--------LESWVPQAALLPHVDL--VVHHGGSGTTLGALGAGVPQ 331
Query: 389 ICWPQVGD 396
+ +P GD
Sbjct: 332 LSFPWAGD 339
Score = 29.6 bits (65), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 28/71 (39%), Gaps = 9/71 (12%)
Query: 17 YGHIKPMLSLAKLFSHAGFRITFVNTDQYHD--RLFGNTDVTAFYKHFPNFLC------- 67
+GH P+L LA AG +TF + + R G V F FL
Sbjct: 31 HGHTYPLLPLATAARAAGHEVTFATGEGFAGTLRKLGFEPVATGXPVFDGFLAALRIRFD 90
Query: 68 TSIPDGLPPDN 78
T P+GL P+
Sbjct: 91 TDSPEGLTPEQ 101
>pdb|1IKO|P Chain P, Crystal Structure Of The Murine Ephrin-B2 Ectodomain
Length = 178
Score = 37.4 bits (85), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 46/84 (54%), Gaps = 9/84 (10%)
Query: 375 WNSTLESMVAGVPMICWPQVGDQ------QVNSRCVS--EIWKIGFDMKDTCDRSTIEKL 426
WNS+ + G ++ +PQ+GD+ +V+S+ V E +K+ KD DR TI+K
Sbjct: 9 WNSSNSKFLPGQGLVLYPQIGDKLDIICPKVDSKTVGQYEYYKVYMVDKDQADRCTIKKE 68
Query: 427 VRDLMDNKR-DKIMESTVQIAKMA 449
L++ R D+ ++ T++ + +
Sbjct: 69 NTPLLNCARPDQDVKFTIKFQEFS 92
>pdb|2HLE|B Chain B, Structural And Biophysical Characterization Of The
Ephb4-ephrinb2 Protein Protein Interaction And Receptor
Specificity
Length = 138
Score = 37.0 bits (84), Expect = 0.022, Method: Composition-based stats.
Identities = 24/84 (28%), Positives = 46/84 (54%), Gaps = 9/84 (10%)
Query: 375 WNSTLESMVAGVPMICWPQVGDQ------QVNSRCVS--EIWKIGFDMKDTCDRSTIEKL 426
WNS+ + G ++ +PQ+GD+ +V+S+ V E +K+ KD DR TI+K
Sbjct: 8 WNSSNSKFLPGQGLVLYPQIGDKLDIICPKVDSKTVGQYEYYKVYMVDKDQADRCTIKKE 67
Query: 427 VRDLMDNKR-DKIMESTVQIAKMA 449
L++ R D+ ++ T++ + +
Sbjct: 68 NTPLLNCARPDQDVKFTIKFQEFS 91
>pdb|2IYF|A Chain A, The Crystal Structure Of Macrolide Glycosyltransferases: A
Blueprint For Antibiotic Engineering
pdb|2IYF|B Chain B, The Crystal Structure Of Macrolide Glycosyltransferases: A
Blueprint For Antibiotic Engineering
Length = 430
Score = 37.0 bits (84), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 57/131 (43%), Gaps = 10/131 (7%)
Query: 338 PAELDQGTKERGCIVSWAPQEEVLAHQAIGGFLTHSGWNSTLESMVAGVPMICWPQVGDQ 397
PAEL + + + W PQ +L + F+TH+G + E + PMI PQ DQ
Sbjct: 275 PAELGE-LPDNVEVHDWVPQLAILRQADL--FVTHAGAGGSQEGLATATPMIAVPQAVDQ 331
Query: 398 QVNSRCVSEIWKIGFDMKDTCDRSTIEKLVRDLMDNKRDKIMESTVQIAKMARDAVKEGG 457
N+ + +G K + +T + L + D E ++ ++ + +EGG
Sbjct: 332 FGNADMLQ---GLGVARKLATEEATADLLRETALALVDDP--EVARRLRRIQAEMAQEGG 386
Query: 458 SSYRNLEKLIE 468
+ R LIE
Sbjct: 387 T--RRAADLIE 395
Score = 30.8 bits (68), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 13/57 (22%), Positives = 24/57 (42%)
Query: 3 QTRVPHVVLLPFPAYGHIKPMLSLAKLFSHAGFRITFVNTDQYHDRLFGNTDVTAFY 59
QT H+ + A+GH+ P L + + G R+T+ + D++ Y
Sbjct: 4 QTTPAHIAMFSIAAHGHVNPSLEVIRELVARGHRVTYAIPPVFADKVAATGPRPVLY 60
>pdb|2VSM|B Chain B, Nipah Virus Attachment Glycoprotein In Complex With Human
Cell Surface Receptor Ephrinb2
Length = 140
Score = 37.0 bits (84), Expect = 0.027, Method: Composition-based stats.
Identities = 24/84 (28%), Positives = 46/84 (54%), Gaps = 9/84 (10%)
Query: 375 WNSTLESMVAGVPMICWPQVGDQ------QVNSRCVS--EIWKIGFDMKDTCDRSTIEKL 426
WNS+ + G ++ +PQ+GD+ +V+S+ V E +K+ KD DR TI+K
Sbjct: 8 WNSSNSKFLPGQGLVLYPQIGDKLDIICPKVDSKTVGQYEYYKVYMVDKDQADRCTIKKE 67
Query: 427 VRDLMD-NKRDKIMESTVQIAKMA 449
L++ K D+ ++ T++ + +
Sbjct: 68 NTPLLNCAKPDQDIKFTIKFQEFS 91
>pdb|3GXU|B Chain B, Crystal Structure Of Eph Receptor And Ephrin Complex
Length = 143
Score = 37.0 bits (84), Expect = 0.027, Method: Composition-based stats.
Identities = 24/84 (28%), Positives = 46/84 (54%), Gaps = 9/84 (10%)
Query: 375 WNSTLESMVAGVPMICWPQVGDQ------QVNSRCVS--EIWKIGFDMKDTCDRSTIEKL 426
WNS+ + G ++ +PQ+GD+ +V+S+ V E +K+ KD DR TI+K
Sbjct: 9 WNSSNSKFLPGQGLVLYPQIGDKLDIICPKVDSKTVGQYEYYKVYMVDKDQADRCTIKKE 68
Query: 427 VRDLMD-NKRDKIMESTVQIAKMA 449
L++ K D+ ++ T++ + +
Sbjct: 69 NTPLLNCAKPDQDIKFTIKFQEFS 92
>pdb|2I85|A Chain A, Nmr Solution Structure Of Human Ephrinb2 Ectodomain
Length = 142
Score = 36.6 bits (83), Expect = 0.028, Method: Composition-based stats.
Identities = 24/84 (28%), Positives = 46/84 (54%), Gaps = 9/84 (10%)
Query: 375 WNSTLESMVAGVPMICWPQVGDQ------QVNSRCVS--EIWKIGFDMKDTCDRSTIEKL 426
WNS+ + G ++ +PQ+GD+ +V+S+ V E +K+ KD DR TI+K
Sbjct: 11 WNSSNSKFLPGQGLVLYPQIGDKLDIICPKVDSKTVGQYEYYKVYMVDKDQADRCTIKKE 70
Query: 427 VRDLMD-NKRDKIMESTVQIAKMA 449
L++ K D+ ++ T++ + +
Sbjct: 71 NTPLLNCAKPDQDIKFTIKFQEFS 94
>pdb|1KGY|E Chain E, Crystal Structure Of The Ephb2-Ephrinb2 Complex
pdb|1KGY|F Chain F, Crystal Structure Of The Ephb2-Ephrinb2 Complex
pdb|1KGY|G Chain G, Crystal Structure Of The Ephb2-Ephrinb2 Complex
pdb|1KGY|H Chain H, Crystal Structure Of The Ephb2-Ephrinb2 Complex
Length = 138
Score = 36.6 bits (83), Expect = 0.028, Method: Composition-based stats.
Identities = 24/84 (28%), Positives = 46/84 (54%), Gaps = 9/84 (10%)
Query: 375 WNSTLESMVAGVPMICWPQVGDQ------QVNSRCVS--EIWKIGFDMKDTCDRSTIEKL 426
WNS+ + G ++ +PQ+GD+ +V+S+ V E +K+ KD DR TI+K
Sbjct: 8 WNSSNSKFLPGGGLVLYPQIGDKLDIICPKVDSKTVGQYEYYKVYMVDKDQADRCTIKKE 67
Query: 427 VRDLMDNKR-DKIMESTVQIAKMA 449
L++ R D+ ++ T++ + +
Sbjct: 68 NTPLLNCARPDQDVKFTIKFQEFS 91
>pdb|2WO2|B Chain B, Crystal Structure Of The Epha4-Ephrinb2 Complex
Length = 153
Score = 36.6 bits (83), Expect = 0.028, Method: Composition-based stats.
Identities = 24/84 (28%), Positives = 46/84 (54%), Gaps = 9/84 (10%)
Query: 375 WNSTLESMVAGVPMICWPQVGDQ------QVNSRCVS--EIWKIGFDMKDTCDRSTIEKL 426
WNS+ + G ++ +PQ+GD+ +V+S+ V E +K+ KD DR TI+K
Sbjct: 12 WNSSNSKFLPGQGLVLYPQIGDKLDIICPKVDSKTVGQYEYYKVYMVDKDQADRCTIKKE 71
Query: 427 VRDLMD-NKRDKIMESTVQIAKMA 449
L++ K D+ ++ T++ + +
Sbjct: 72 NTPLLNCAKPDQDIKFTIKFQEFS 95
>pdb|2VSK|B Chain B, Hendra Virus Attachment Glycoprotein In Complex With Human
Cell Surface Receptor Ephrinb2
pdb|2VSK|D Chain D, Hendra Virus Attachment Glycoprotein In Complex With Human
Cell Surface Receptor Ephrinb2
Length = 138
Score = 36.6 bits (83), Expect = 0.028, Method: Composition-based stats.
Identities = 24/84 (28%), Positives = 46/84 (54%), Gaps = 9/84 (10%)
Query: 375 WNSTLESMVAGVPMICWPQVGDQ------QVNSRCVS--EIWKIGFDMKDTCDRSTIEKL 426
WNS+ + G ++ +PQ+GD+ +V+S+ V E +K+ KD DR TI+K
Sbjct: 8 WNSSNSKFLPGQGLVLYPQIGDKLDIICPKVDSKTVGQYEYYKVYMVDKDQADRCTIKKE 67
Query: 427 VRDLMD-NKRDKIMESTVQIAKMA 449
L++ K D+ ++ T++ + +
Sbjct: 68 NTPLLNCAKPDQDIKFTIKFQEFS 91
>pdb|3IA7|A Chain A, Crystal Structure Of Calg4, The Calicheamicin
Glycosyltransferase
pdb|3IA7|B Chain B, Crystal Structure Of Calg4, The Calicheamicin
Glycosyltransferase
Length = 402
Score = 36.2 bits (82), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 39/165 (23%), Positives = 62/165 (37%), Gaps = 37/165 (22%)
Query: 280 WLGSQPSRSVLYVSFGS-------FIKLSGDQILEF-WHGIVNSGKGFLWVIRSDLIDGE 331
W +P VL VS G+ F + + WH +V + GFL
Sbjct: 224 WQPPRPDAPVLLVSLGNQFNEHPEFFRACAQAFADTPWH-VVXAIGGFL---------DP 273
Query: 332 SGVGPVPAELDQGTKERGCIVSWAPQEEVLAHQAIGGFLTHSGWNSTLESMVAGVPMICW 391
+ +GP+P ++ W P VLAH LTH + LE+ AGVP++
Sbjct: 274 AVLGPLPPNVEAH--------QWIPFHSVLAHAR--ACLTHGTTGAVLEAFAAGVPLVLV 323
Query: 392 PQVGDQQVNSRCVSEIWKIGF-------DMKDTCDRSTIEKLVRD 429
P + S + ++G ++ R +E+L D
Sbjct: 324 PHFATEAAPS--AERVIELGLGSVLRPDQLEPASIREAVERLAAD 366
Score = 32.3 bits (72), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 16/58 (27%), Positives = 24/58 (41%)
Query: 3 QTRVPHVVLLPFPAYGHIKPMLSLAKLFSHAGFRITFVNTDQYHDRLFGNTDVTAFYK 60
R H++ +GH+ P L L + G RIT+V T + D + YK
Sbjct: 1 HXRQRHILFANVQGHGHVYPSLGLVSELARRGHRITYVTTPLFADEVKAAGAEVVLYK 58
>pdb|4AMB|A Chain A, Crystal Structure Of The Glycosyltransferase Snogd From
Streptomyces Nogalater
pdb|4AMB|B Chain B, Crystal Structure Of The Glycosyltransferase Snogd From
Streptomyces Nogalater
Length = 400
Score = 31.6 bits (70), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 40/96 (41%), Gaps = 9/96 (9%)
Query: 351 IVSWAPQEEVLAHQAIGGFLTHSGWNSTLESMVAGVPMICWPQVGDQQVNSRCVSEIWKI 410
+V W P +L + + H G + L ++ AGVP P G Q +R V I
Sbjct: 292 VVEWIPLGALL--ETCDAIIHHGGSGTLLTALAAGVPQCVIPH-GSYQDTNRDVLTGLGI 348
Query: 411 GFDMK------DTCDRSTIEKLVRDLMDNKRDKIME 440
GFD + + C R + +R+ R ++ E
Sbjct: 349 GFDAEAGSLGAEQCRRLLDDAGLREAALRVRQEMSE 384
>pdb|3IAA|A Chain A, Crystal Structure Of Calg2, Calicheamicin
Glycosyltransferase, Tdp Bound Form
pdb|3IAA|B Chain B, Crystal Structure Of Calg2, Calicheamicin
Glycosyltransferase, Tdp Bound Form
Length = 416
Score = 31.6 bits (70), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 16/54 (29%), Positives = 27/54 (50%), Gaps = 2/54 (3%)
Query: 354 WAPQEEVLAHQAIGGFLTHSGWNSTLESMVAGVPMICWPQVGDQQVNSRCVSEI 407
W P +VL + +TH G + E++ G P++ PQ D Q +R V ++
Sbjct: 304 WVPHVKVLEQATV--CVTHGGXGTLXEALYWGRPLVVVPQSFDVQPXARRVDQL 355
>pdb|3RSC|A Chain A, Crystal Structure Of Calg2, Calicheamicin
Glycosyltransferase, Tdp And Calicheamicin T0 Bound Form
pdb|3RSC|B Chain B, Crystal Structure Of Calg2, Calicheamicin
Glycosyltransferase, Tdp And Calicheamicin T0 Bound Form
Length = 415
Score = 31.6 bits (70), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 16/54 (29%), Positives = 27/54 (50%), Gaps = 2/54 (3%)
Query: 354 WAPQEEVLAHQAIGGFLTHSGWNSTLESMVAGVPMICWPQVGDQQVNSRCVSEI 407
W P +VL + +TH G + E++ G P++ PQ D Q +R V ++
Sbjct: 304 WVPHVKVLEQATV--CVTHGGXGTLXEALYWGRPLVVVPQSFDVQPXARRVDQL 355
>pdb|4AMG|A Chain A, Crystal Structure Of The Glycosyltransferase Snogd From
Streptomyces Nogalater
pdb|4AMG|B Chain B, Crystal Structure Of The Glycosyltransferase Snogd From
Streptomyces Nogalater
pdb|4AN4|A Chain A, Crystal Structure Of The Glycosyltransferase Snogd From
Streptomyces Nogalater
pdb|4AN4|B Chain B, Crystal Structure Of The Glycosyltransferase Snogd From
Streptomyces Nogalater
pdb|4AN4|C Chain C, Crystal Structure Of The Glycosyltransferase Snogd From
Streptomyces Nogalater
pdb|4AN4|D Chain D, Crystal Structure Of The Glycosyltransferase Snogd From
Streptomyces Nogalater
Length = 400
Score = 31.6 bits (70), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 40/96 (41%), Gaps = 9/96 (9%)
Query: 351 IVSWAPQEEVLAHQAIGGFLTHSGWNSTLESMVAGVPMICWPQVGDQQVNSRCVSEIWKI 410
+V W P +L + + H G + L ++ AGVP P G Q +R V I
Sbjct: 292 VVEWIPLGALL--ETCDAIIHHGGSGTLLTALAAGVPQCVIPH-GSYQDTNRDVLTGLGI 348
Query: 411 GFDMK------DTCDRSTIEKLVRDLMDNKRDKIME 440
GFD + + C R + +R+ R ++ E
Sbjct: 349 GFDAEAGSLGAEQCRRLLDDAGLREAALRVRQEMSE 384
>pdb|3RIZ|A Chain A, Crystal Structure Of The Plant Steroid Receptor Bri1
Ectodomain
pdb|3RJ0|A Chain A, Plant Steroid Receptor Bri1 Ectodomain In Complex With
Brassinolide
Length = 772
Score = 31.2 bits (69), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 29/127 (22%), Positives = 59/127 (46%), Gaps = 14/127 (11%)
Query: 148 DFHFSKLAEEGELPVTDENFDKPVTCIPELENIFRNRDLPSICRHGGPDDPILQTFIRDT 207
D F++ + GELP + N + + N F LP++C++ P + + + ++++
Sbjct: 346 DLSFNEFS--GELPESLTNLSASLLTLDLSSNNFSGPILPNLCQN--PKNTLQELYLQNN 401
Query: 208 SATTRTSALVIN---------TFNEIEGPIISKLGSRLTKIYTVGPLHALLKSRIQEDSV 258
T + + N +FN + G I S LGS L+K+ + +L+ I ++ +
Sbjct: 402 GFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGS-LSKLRDLKLWLNMLEGEIPQELM 460
Query: 259 ESSPLES 265
LE+
Sbjct: 461 YVKTLET 467
>pdb|3RGX|A Chain A, Structural Insight Into Brassinosteroid Perception By Bri1
pdb|3RGZ|A Chain A, Structural Insight Into Brassinosteroid Perception By Bri1
Length = 768
Score = 30.8 bits (68), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 29/127 (22%), Positives = 59/127 (46%), Gaps = 14/127 (11%)
Query: 148 DFHFSKLAEEGELPVTDENFDKPVTCIPELENIFRNRDLPSICRHGGPDDPILQTFIRDT 207
D F++ + GELP + N + + N F LP++C++ P + + + ++++
Sbjct: 349 DLSFNEFS--GELPESLTNLSASLLTLDLSSNNFSGPILPNLCQN--PKNTLQELYLQNN 404
Query: 208 SATTRTSALVIN---------TFNEIEGPIISKLGSRLTKIYTVGPLHALLKSRIQEDSV 258
T + + N +FN + G I S LGS L+K+ + +L+ I ++ +
Sbjct: 405 GFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGS-LSKLRDLKLWLNMLEGEIPQELM 463
Query: 259 ESSPLES 265
LE+
Sbjct: 464 YVKTLET 470
>pdb|2P6P|A Chain A, X-Ray Crystal Structure Of C-C Bond-Forming
Dtdp-D-Olivose-Transferase Urdgt2
pdb|2P6P|B Chain B, X-Ray Crystal Structure Of C-C Bond-Forming
Dtdp-D-Olivose-Transferase Urdgt2
Length = 384
Score = 28.5 bits (62), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 30/128 (23%), Positives = 57/128 (44%), Gaps = 11/128 (8%)
Query: 280 WLGSQPSRSVLYVSFGSFI-KLSGDQILEFWHGIVNSGKGFLWVIRSDLIDGESGVGPVP 338
W+ ++ +R + V+ GS + K S D+ +F G+ W + + ++ +
Sbjct: 203 WMYTRDTRQRVLVTSGSRVAKESYDRNFDFLRGLAK--DLVRWDVELIVAAPDTVAEALR 260
Query: 339 AELDQGTKERGCIVSWAPQEEVLAHQAIGGFLTHSGWNSTLESMVAGVPMICWPQVGDQQ 398
AE+ Q V W P + V + + H+G STL + AGVP + P+ +
Sbjct: 261 AEVPQAR------VGWTPLDVVAPTCDL--LVHHAGGVSTLTGLSAGVPQLLIPKGSVLE 312
Query: 399 VNSRCVSE 406
+R V++
Sbjct: 313 APARRVAD 320
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.321 0.137 0.425
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 14,744,224
Number of Sequences: 62578
Number of extensions: 644547
Number of successful extensions: 1326
Number of sequences better than 100.0: 26
Number of HSP's better than 100.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 15
Number of HSP's that attempted gapping in prelim test: 1283
Number of HSP's gapped (non-prelim): 32
length of query: 477
length of database: 14,973,337
effective HSP length: 102
effective length of query: 375
effective length of database: 8,590,381
effective search space: 3221392875
effective search space used: 3221392875
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 53 (25.0 bits)