Query 011792
Match_columns 477
No_of_seqs 135 out of 1208
Neff 9.9
Searched_HMMs 29240
Date Mon Mar 25 15:25:09 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/011792.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/011792hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3hbf_A Flavonoid 3-O-glucosylt 100.0 8.5E-68 2.9E-72 526.4 36.5 437 1-471 8-453 (454)
2 2pq6_A UDP-glucuronosyl/UDP-gl 100.0 9.5E-65 3.3E-69 514.8 36.3 456 6-471 8-478 (482)
3 2c1x_A UDP-glucose flavonoid 3 100.0 3.3E-61 1.1E-65 484.0 35.5 441 1-471 1-451 (456)
4 2vch_A Hydroquinone glucosyltr 100.0 1E-59 3.6E-64 476.2 41.2 444 1-472 1-469 (480)
5 2acv_A Triterpene UDP-glucosyl 100.0 1.2E-57 4.1E-62 459.4 31.8 434 6-471 9-462 (463)
6 2iya_A OLEI, oleandomycin glyc 100.0 2.6E-44 8.8E-49 360.4 29.2 397 6-473 12-422 (424)
7 4amg_A Snogd; transferase, pol 100.0 3.3E-43 1.1E-47 349.6 25.9 354 6-470 22-398 (400)
8 1iir_A Glycosyltransferase GTF 100.0 7E-43 2.4E-47 348.8 15.9 384 7-472 1-400 (415)
9 1rrv_A Glycosyltransferase GTF 100.0 2.4E-41 8.2E-46 337.9 21.2 383 7-472 1-401 (416)
10 3h4t_A Glycosyltransferase GTF 100.0 1.2E-40 4E-45 331.2 19.5 374 7-473 1-383 (404)
11 3rsc_A CALG2; TDP, enediyne, s 100.0 5.5E-39 1.9E-43 320.8 31.5 384 6-472 20-413 (415)
12 3ia7_A CALG4; glycosysltransfe 100.0 4.2E-38 1.4E-42 312.9 32.1 385 7-474 5-400 (402)
13 2yjn_A ERYCIII, glycosyltransf 100.0 1.1E-38 3.8E-43 321.0 23.4 374 6-473 20-436 (441)
14 2p6p_A Glycosyl transferase; X 100.0 9.1E-38 3.1E-42 308.7 26.3 357 7-475 1-382 (384)
15 2iyf_A OLED, oleandomycin glyc 100.0 3.5E-37 1.2E-41 309.2 29.7 388 1-471 1-398 (430)
16 4fzr_A SSFS6; structural genom 100.0 5.1E-36 1.7E-40 297.6 16.9 344 6-451 15-384 (398)
17 3oti_A CALG3; calicheamicin, T 100.0 1.3E-34 4.5E-39 287.4 26.3 352 6-471 20-396 (398)
18 3tsa_A SPNG, NDP-rhamnosyltran 100.0 3.6E-34 1.2E-38 283.6 22.8 357 6-473 1-389 (391)
19 3otg_A CALG1; calicheamicin, T 100.0 9.6E-31 3.3E-35 260.7 32.2 368 6-472 20-408 (412)
20 3s2u_A UDP-N-acetylglucosamine 100.0 9.7E-28 3.3E-32 234.4 21.7 340 6-472 2-356 (365)
21 2o6l_A UDP-glucuronosyltransfe 99.9 7.6E-27 2.6E-31 202.9 13.5 162 273-451 7-170 (170)
22 1f0k_A MURG, UDP-N-acetylgluco 99.8 1.2E-18 4.1E-23 170.1 24.0 334 6-473 6-356 (364)
23 3hbm_A UDP-sugar hydrolase; PS 99.6 5.6E-14 1.9E-18 130.4 18.7 115 286-415 156-273 (282)
24 2jzc_A UDP-N-acetylglucosamine 99.6 2.2E-15 7.4E-20 134.1 8.6 133 284-431 25-197 (224)
25 3okp_A GDP-mannose-dependent a 99.3 6.3E-10 2.2E-14 109.1 25.4 311 6-433 4-344 (394)
26 1v4v_A UDP-N-acetylglucosamine 99.3 7.9E-11 2.7E-15 115.1 18.3 84 347-442 255-341 (376)
27 3fro_A GLGA glycogen synthase; 99.2 2.7E-09 9.4E-14 106.1 25.6 131 289-433 252-396 (439)
28 3c48_A Predicted glycosyltrans 99.2 1.1E-08 3.6E-13 102.0 29.5 374 6-473 20-428 (438)
29 3dzc_A UDP-N-acetylglucosamine 99.2 1.2E-10 4.1E-15 114.5 14.3 85 347-443 288-375 (396)
30 3ot5_A UDP-N-acetylglucosamine 99.2 1.1E-10 3.7E-15 114.9 13.7 85 347-443 282-369 (403)
31 1vgv_A UDP-N-acetylglucosamine 99.2 2.3E-10 7.7E-15 112.1 16.0 134 286-440 204-347 (384)
32 2gek_A Phosphatidylinositol ma 99.2 1.3E-08 4.5E-13 100.1 27.1 80 346-433 262-349 (406)
33 2jjm_A Glycosyl transferase, g 99.1 3.1E-08 1.1E-12 97.1 27.3 317 6-433 15-350 (394)
34 3beo_A UDP-N-acetylglucosamine 99.1 1.2E-09 4.1E-14 106.4 16.1 83 347-441 263-348 (375)
35 2r60_A Glycosyl transferase, g 99.1 1.9E-08 6.3E-13 102.1 24.0 80 346-433 334-424 (499)
36 2iuy_A Avigt4, glycosyltransfe 99.1 2.5E-09 8.4E-14 102.9 16.0 125 290-432 164-307 (342)
37 2iw1_A Lipopolysaccharide core 99.0 6.8E-08 2.3E-12 93.8 24.2 136 286-442 194-344 (374)
38 4hwg_A UDP-N-acetylglucosamine 98.9 1.5E-08 5.2E-13 98.8 14.0 314 6-433 9-342 (385)
39 3s28_A Sucrose synthase 1; gly 98.7 3.5E-07 1.2E-11 96.8 17.9 78 346-431 639-728 (816)
40 2x6q_A Trehalose-synthase TRET 98.7 2.3E-06 7.9E-11 84.4 22.5 83 346-440 292-384 (416)
41 1rzu_A Glycogen synthase 1; gl 98.6 5.2E-06 1.8E-10 83.6 20.8 126 289-431 292-438 (485)
42 2qzs_A Glycogen synthase; glyc 98.5 1.4E-05 4.9E-10 80.4 22.2 129 287-431 291-439 (485)
43 3oy2_A Glycosyltransferase B73 98.4 6E-05 2.1E-09 74.0 22.4 80 349-440 256-360 (413)
44 2hy7_A Glucuronosyltransferase 98.3 0.00018 6.2E-09 70.5 24.1 75 345-433 263-352 (406)
45 2f9f_A First mannosyl transfer 98.3 2.6E-06 8.8E-11 73.3 8.5 139 289-446 24-174 (177)
46 2xci_A KDO-transferase, 3-deox 98.1 0.0007 2.4E-08 65.5 22.6 96 348-449 261-363 (374)
47 2vsy_A XCC0866; transferase, g 97.8 0.00068 2.3E-08 69.5 17.5 138 288-441 377-528 (568)
48 3rhz_A GTF3, nucleotide sugar 97.5 0.00019 6.5E-09 68.3 8.2 111 348-470 215-337 (339)
49 3q3e_A HMW1C-like glycosyltran 97.5 0.0015 5.1E-08 66.2 14.6 147 287-442 440-595 (631)
50 3qhp_A Type 1 capsular polysac 97.5 0.00074 2.5E-08 56.8 10.4 126 288-433 2-140 (166)
51 2bfw_A GLGA glycogen synthase; 97.3 0.0019 6.5E-08 56.0 11.8 81 348-439 96-185 (200)
52 4gyw_A UDP-N-acetylglucosamine 97.3 0.0035 1.2E-07 66.0 15.0 142 285-433 520-668 (723)
53 3tov_A Glycosyl transferase fa 97.2 0.0097 3.3E-07 56.8 16.0 104 6-136 8-115 (349)
54 1psw_A ADP-heptose LPS heptosy 97.2 0.029 9.9E-07 53.3 19.0 103 7-136 1-106 (348)
55 2x0d_A WSAF; GT4 family, trans 94.3 0.15 5E-06 49.8 9.1 84 347-441 295-385 (413)
56 3vue_A GBSS-I, granule-bound s 93.3 0.12 4.2E-06 52.2 6.7 133 288-432 327-476 (536)
57 2phj_A 5'-nucleotidase SURE; S 92.1 0.87 3E-05 40.4 9.8 113 7-139 2-127 (251)
58 2wqk_A 5'-nucleotidase SURE; S 89.4 1.9 6.4E-05 38.5 9.4 112 8-139 3-127 (251)
59 1j9j_A Stationary phase surviV 89.0 2.1 7.3E-05 37.9 9.3 113 7-139 1-128 (247)
60 3vue_A GBSS-I, granule-bound s 88.4 0.45 1.5E-05 48.0 5.2 37 6-42 9-51 (536)
61 2e6c_A 5'-nucleotidase SURE; S 86.4 5.2 0.00018 35.4 10.2 115 7-139 1-129 (244)
62 1l5x_A SurviVal protein E; str 85.3 5.6 0.00019 36.0 10.1 113 7-140 1-128 (280)
63 3fgn_A Dethiobiotin synthetase 83.3 7.1 0.00024 34.7 9.9 124 6-142 25-168 (251)
64 2x0d_A WSAF; GT4 family, trans 83.1 0.56 1.9E-05 45.6 2.7 38 6-43 46-88 (413)
65 1uqt_A Alpha, alpha-trehalose- 80.5 7.5 0.00026 38.4 9.9 105 352-472 337-453 (482)
66 3vot_A L-amino acid ligase, BL 79.7 6 0.0002 38.3 8.8 99 1-134 1-101 (425)
67 3nb0_A Glycogen [starch] synth 78.6 6.7 0.00023 40.3 8.8 73 353-431 499-592 (725)
68 1g5t_A COB(I)alamin adenosyltr 77.6 15 0.00051 31.2 9.4 104 6-121 28-131 (196)
69 2gt1_A Lipopolysaccharide hept 77.4 9 0.00031 35.3 9.0 45 7-51 1-47 (326)
70 1kjn_A MTH0777; hypotethical p 76.4 4 0.00014 32.6 5.0 44 1-44 1-46 (157)
71 2lnd_A De novo designed protei 75.9 2.7 9.3E-05 29.3 3.5 50 383-432 49-100 (112)
72 4dzz_A Plasmid partitioning pr 75.5 8.5 0.00029 32.5 7.7 37 8-44 2-40 (206)
73 3t5t_A Putative glycosyltransf 75.5 11 0.00039 37.1 9.3 110 348-473 353-473 (496)
74 2gt1_A Lipopolysaccharide hept 74.6 2.5 8.6E-05 39.2 4.3 134 286-433 177-322 (326)
75 3qxc_A Dethiobiotin synthetase 73.0 14 0.00049 32.5 8.5 46 97-142 118-172 (242)
76 1ccw_A Protein (glutamate muta 70.8 6.4 0.00022 31.3 5.2 38 6-43 3-40 (137)
77 3ty2_A 5'-nucleotidase SURE; s 70.1 5.9 0.0002 35.3 5.2 42 3-46 8-49 (261)
78 3qjg_A Epidermin biosynthesis 65.7 8.5 0.00029 32.1 5.1 43 6-49 5-47 (175)
79 3pdi_B Nitrogenase MOFE cofact 64.1 14 0.00049 36.1 7.2 87 6-137 313-399 (458)
80 2yxb_A Coenzyme B12-dependent 63.9 5.1 0.00017 32.9 3.4 38 6-43 18-55 (161)
81 2q5c_A NTRC family transcripti 63.7 25 0.00084 29.8 7.8 28 110-140 142-169 (196)
82 1mvl_A PPC decarboxylase athal 62.8 10 0.00035 32.6 5.2 42 6-49 19-60 (209)
83 1sbz_A Probable aromatic acid 62.7 6.6 0.00023 33.4 3.9 43 7-50 1-44 (197)
84 2vqe_B 30S ribosomal protein S 62.1 27 0.00091 31.0 7.8 36 107-142 155-192 (256)
85 3lqk_A Dipicolinate synthase s 62.0 12 0.0004 32.0 5.4 39 6-45 7-46 (201)
86 2q5c_A NTRC family transcripti 60.3 34 0.0012 28.9 8.1 37 364-401 50-86 (196)
87 4b4o_A Epimerase family protei 60.0 6.8 0.00023 35.6 3.9 32 7-42 1-32 (298)
88 3u7q_B Nitrogenase molybdenum- 58.5 57 0.0019 32.4 10.5 99 6-137 364-469 (523)
89 2i2x_B MTAC, methyltransferase 58.4 15 0.0005 32.8 5.7 38 6-43 123-160 (258)
90 2bw0_A 10-FTHFDH, 10-formyltet 58.3 39 0.0013 31.3 8.7 105 6-141 22-131 (329)
91 1qkk_A DCTD, C4-dicarboxylate 58.0 41 0.0014 26.4 8.0 60 384-447 74-133 (155)
92 3zqu_A Probable aromatic acid 57.8 11 0.00038 32.4 4.5 43 6-49 4-46 (209)
93 1y80_A Predicted cobalamin bin 57.7 10 0.00034 32.6 4.3 44 6-49 88-131 (210)
94 1xmp_A PURE, phosphoribosylami 55.9 83 0.0028 25.7 10.3 141 286-456 10-166 (170)
95 1qgu_B Protein (nitrogenase mo 54.9 45 0.0015 33.1 9.0 90 6-137 360-465 (519)
96 4dim_A Phosphoribosylglycinami 54.0 33 0.0011 32.6 7.8 33 6-43 7-39 (403)
97 3euw_A MYO-inositol dehydrogen 53.4 75 0.0026 29.3 10.1 109 288-415 6-122 (344)
98 3pdi_A Nitrogenase MOFE cofact 53.3 36 0.0012 33.4 8.1 37 97-138 390-426 (483)
99 2r8r_A Sensor protein; KDPD, P 53.3 17 0.00059 31.6 5.1 39 6-44 6-44 (228)
100 3mc3_A DSRE/DSRF-like family p 53.3 24 0.0008 27.7 5.5 39 6-44 15-56 (134)
101 1psw_A ADP-heptose LPS heptosy 52.8 77 0.0026 29.0 10.1 100 7-139 181-288 (348)
102 1z82_A Glycerol-3-phosphate de 51.8 8.5 0.00029 35.8 3.1 32 6-42 14-45 (335)
103 1g63_A Epidermin modifying enz 50.8 15 0.0005 30.8 4.1 43 7-50 3-45 (181)
104 3q2i_A Dehydrogenase; rossmann 49.9 74 0.0025 29.4 9.4 124 288-432 15-149 (354)
105 3llv_A Exopolyphosphatase-rela 49.7 8.2 0.00028 30.4 2.3 33 6-43 6-38 (141)
106 3tov_A Glycosyl transferase fa 49.7 45 0.0015 31.0 7.8 100 7-140 186-289 (349)
107 4b4k_A N5-carboxyaminoimidazol 49.6 1.1E+02 0.0038 25.3 11.3 142 287-456 22-177 (181)
108 2ejb_A Probable aromatic acid 49.6 20 0.00068 30.2 4.8 44 7-51 2-45 (189)
109 3goc_A Endonuclease V; alpha-b 48.8 26 0.0009 30.5 5.4 41 97-137 94-141 (237)
110 1u11_A PURE (N5-carboxyaminoim 48.8 88 0.003 25.9 8.2 140 287-456 21-176 (182)
111 1p3y_1 MRSD protein; flavoprot 48.4 10 0.00035 32.2 2.7 43 6-49 8-50 (194)
112 3ezx_A MMCP 1, monomethylamine 48.3 19 0.00066 31.0 4.6 44 6-49 92-135 (215)
113 1qzu_A Hypothetical protein MD 47.9 16 0.00056 31.2 4.0 43 6-49 19-62 (206)
114 3e9m_A Oxidoreductase, GFO/IDH 47.7 74 0.0025 29.1 9.0 62 354-415 56-124 (330)
115 2w36_A Endonuclease V; hypoxan 47.4 29 0.001 30.0 5.5 41 97-137 90-137 (225)
116 3tqq_A Methionyl-tRNA formyltr 47.3 66 0.0023 29.5 8.3 34 6-44 2-35 (314)
117 2i2c_A Probable inorganic poly 46.7 12 0.00043 33.6 3.2 50 367-432 37-92 (272)
118 2b8t_A Thymidine kinase; deoxy 46.6 1.1E+02 0.0037 26.4 9.2 39 6-44 11-50 (223)
119 1id1_A Putative potassium chan 46.5 13 0.00045 29.8 3.1 33 6-43 3-35 (153)
120 2pju_A Propionate catabolism o 46.0 19 0.00066 31.3 4.2 29 366-395 64-92 (225)
121 4hkt_A Inositol 2-dehydrogenas 45.4 92 0.0032 28.4 9.2 77 354-432 52-137 (331)
122 3dfu_A Uncharacterized protein 45.3 16 0.00054 32.0 3.6 36 1-42 2-37 (232)
123 1fmt_A Methionyl-tRNA FMet for 44.3 1E+02 0.0034 28.2 9.1 33 6-43 3-35 (314)
124 3mcu_A Dipicolinate synthase, 43.7 22 0.00077 30.4 4.2 38 6-44 5-43 (207)
125 2gk4_A Conserved hypothetical 43.5 30 0.001 30.2 5.0 26 17-44 28-53 (232)
126 3m2t_A Probable dehydrogenase; 42.5 69 0.0024 29.8 7.9 110 288-415 7-125 (359)
127 3e18_A Oxidoreductase; dehydro 41.8 1.4E+02 0.0049 27.6 10.0 123 288-432 7-139 (359)
128 3oow_A Phosphoribosylaminoimid 41.7 1.4E+02 0.0048 24.3 10.1 143 288-457 6-161 (166)
129 3sbx_A Putative uncharacterize 41.1 38 0.0013 28.5 5.1 38 5-43 12-53 (189)
130 3kjh_A CO dehydrogenase/acetyl 40.9 16 0.00055 31.8 3.0 37 7-43 1-37 (254)
131 1lss_A TRK system potassium up 40.6 31 0.0011 26.6 4.5 32 6-42 4-35 (140)
132 2lpm_A Two-component response 40.5 21 0.00073 27.5 3.3 36 100-137 45-85 (123)
133 4hb9_A Similarities with proba 40.5 15 0.00052 34.7 3.0 29 7-40 2-30 (412)
134 2d1p_A TUSD, hypothetical UPF0 40.3 56 0.0019 25.9 5.8 39 6-44 12-54 (140)
135 1mio_B Nitrogenase molybdenum 40.3 77 0.0026 30.8 8.1 36 97-137 374-409 (458)
136 3eag_A UDP-N-acetylmuramate:L- 40.0 23 0.00078 32.7 4.0 33 6-42 4-36 (326)
137 2r85_A PURP protein PF1517; AT 39.7 26 0.00088 32.1 4.4 33 6-44 2-34 (334)
138 3lrx_A Putative hydrogenase; a 39.1 25 0.00084 28.5 3.6 36 7-45 24-59 (158)
139 1wrd_A TOM1, target of MYB pro 39.1 48 0.0016 24.7 4.9 31 417-452 2-32 (103)
140 3db2_A Putative NADPH-dependen 38.6 75 0.0026 29.4 7.5 124 288-432 7-140 (354)
141 3evn_A Oxidoreductase, GFO/IDH 38.2 2.1E+02 0.0072 25.9 10.5 78 353-432 55-141 (329)
142 2iz6_A Molybdenum cofactor car 37.5 44 0.0015 27.7 4.9 55 373-432 116-173 (176)
143 3ga2_A Endonuclease V; alpha-b 37.2 34 0.0011 30.0 4.3 41 97-137 96-143 (246)
144 3to5_A CHEY homolog; alpha(5)b 36.8 40 0.0014 26.4 4.4 33 110-142 57-98 (134)
145 3kcn_A Adenylate cyclase homol 36.7 95 0.0033 24.0 6.9 64 383-450 74-139 (151)
146 3kxe_C Antitoxin protein PARD- 36.7 48 0.0016 23.9 4.4 52 419-475 30-81 (88)
147 4eg0_A D-alanine--D-alanine li 36.3 54 0.0019 29.8 6.0 38 6-43 13-54 (317)
148 4dll_A 2-hydroxy-3-oxopropiona 36.1 38 0.0013 31.1 4.9 32 6-42 31-62 (320)
149 3n7t_A Macrophage binding prot 36.0 78 0.0027 27.8 6.7 37 7-43 10-57 (247)
150 3ors_A N5-carboxyaminoimidazol 35.5 1.8E+02 0.0061 23.6 9.3 136 288-453 4-155 (163)
151 3gl9_A Response regulator; bet 35.2 66 0.0023 23.9 5.5 33 110-142 46-87 (122)
152 1o4v_A Phosphoribosylaminoimid 34.8 1.9E+02 0.0067 23.9 11.4 137 286-454 12-164 (183)
153 1pjq_A CYSG, siroheme synthase 34.7 2.6E+02 0.0088 27.0 10.8 152 280-452 7-168 (457)
154 2g1u_A Hypothetical protein TM 34.7 33 0.0011 27.4 3.8 33 6-43 19-51 (155)
155 2qs7_A Uncharacterized protein 33.1 57 0.0019 25.9 4.8 40 7-46 8-48 (144)
156 3fwz_A Inner membrane protein 32.7 23 0.0008 27.8 2.5 33 6-43 7-39 (140)
157 3lp6_A Phosphoribosylaminoimid 32.7 2.1E+02 0.007 23.5 11.4 139 287-452 7-156 (174)
158 3hn2_A 2-dehydropantoate 2-red 32.6 34 0.0011 31.3 3.9 39 7-51 3-41 (312)
159 2jk1_A HUPR, hydrogenase trans 32.3 1.6E+02 0.0055 22.1 7.6 49 384-433 71-119 (139)
160 3qvl_A Putative hydantoin race 32.3 2.1E+02 0.0072 24.9 8.9 36 7-42 2-38 (245)
161 3s2u_A UDP-N-acetylglucosamine 32.2 79 0.0027 29.4 6.5 36 288-325 4-39 (365)
162 1jx7_A Hypothetical protein YC 32.0 79 0.0027 23.5 5.4 38 8-45 3-45 (117)
163 3kuu_A Phosphoribosylaminoimid 31.9 2.1E+02 0.0073 23.4 10.2 140 288-457 13-168 (174)
164 1dhr_A Dihydropteridine reduct 31.5 46 0.0016 28.8 4.4 39 1-42 1-39 (241)
165 3c1a_A Putative oxidoreductase 31.2 2.3E+02 0.0079 25.4 9.5 106 288-414 12-125 (315)
166 3rc1_A Sugar 3-ketoreductase; 31.0 92 0.0032 28.8 6.7 110 288-415 29-146 (350)
167 3lyu_A Putative hydrogenase; t 30.9 44 0.0015 26.3 3.8 35 7-44 19-53 (142)
168 2hy5_A Putative sulfurtransfer 30.8 97 0.0033 23.8 5.8 35 10-44 5-42 (130)
169 2glx_A 1,5-anhydro-D-fructose 30.8 2.1E+02 0.0071 25.9 9.1 61 355-415 52-119 (332)
170 1iow_A DD-ligase, DDLB, D-ALA\ 30.5 82 0.0028 28.2 6.2 38 6-43 2-43 (306)
171 1u7z_A Coenzyme A biosynthesis 30.5 55 0.0019 28.4 4.6 23 21-43 35-57 (226)
172 3i83_A 2-dehydropantoate 2-red 30.3 32 0.0011 31.5 3.3 39 7-51 3-41 (320)
173 3qrx_B Melittin; calcium-bindi 30.2 14 0.00048 19.1 0.4 17 374-390 1-17 (26)
174 3o9z_A Lipopolysaccaride biosy 30.0 3.1E+02 0.01 24.7 11.6 109 288-415 5-129 (312)
175 2hmt_A YUAA protein; RCK, KTN, 29.9 23 0.00077 27.5 1.9 31 7-42 7-37 (144)
176 3zzm_A Bifunctional purine bio 29.9 98 0.0034 30.3 6.5 100 6-121 9-113 (523)
177 3ot1_A 4-methyl-5(B-hydroxyeth 29.6 95 0.0032 26.2 6.0 42 1-43 4-45 (208)
178 3moi_A Probable dehydrogenase; 29.5 1.8E+02 0.006 27.3 8.5 78 353-432 52-138 (387)
179 2qh9_A UPF0215 protein AF_1433 29.3 96 0.0033 25.8 5.7 40 99-138 51-98 (184)
180 4g6h_A Rotenone-insensitive NA 29.2 28 0.00096 34.4 2.8 34 6-44 42-75 (502)
181 3to5_A CHEY homolog; alpha(5)b 29.2 49 0.0017 25.8 3.8 47 384-432 86-132 (134)
182 3mz0_A Inositol 2-dehydrogenas 29.1 2.3E+02 0.0078 25.9 9.1 61 352-412 53-120 (344)
183 3u3x_A Oxidoreductase; structu 29.1 2E+02 0.007 26.5 8.8 111 288-415 28-145 (361)
184 3f67_A Putative dienelactone h 29.0 65 0.0022 27.1 5.0 36 7-42 32-67 (241)
185 2rjn_A Response regulator rece 28.7 33 0.0011 26.9 2.7 63 384-450 78-141 (154)
186 1gsa_A Glutathione synthetase; 28.4 44 0.0015 30.1 3.9 37 7-43 2-41 (316)
187 2vo1_A CTP synthase 1; pyrimid 28.4 63 0.0021 28.8 4.5 40 6-45 22-64 (295)
188 3l7i_A Teichoic acid biosynthe 28.3 43 0.0015 34.8 4.2 107 353-469 605-717 (729)
189 2hy5_B Intracellular sulfur ox 28.2 1.2E+02 0.0042 23.6 6.0 37 9-45 9-47 (136)
190 3kkl_A Probable chaperone prot 28.1 97 0.0033 27.1 5.9 37 7-43 4-51 (244)
191 1wcv_1 SOJ, segregation protei 28.0 41 0.0014 29.6 3.5 43 1-44 1-45 (257)
192 3dfz_A SIRC, precorrin-2 dehyd 28.0 2.9E+02 0.0098 23.7 9.7 146 280-451 26-185 (223)
193 3oti_A CALG3; calicheamicin, T 27.6 3E+02 0.01 25.5 9.8 90 7-137 232-325 (398)
194 3h4t_A Glycosyltransferase GTF 27.4 2.6E+02 0.009 26.1 9.4 88 8-137 222-310 (404)
195 3k9g_A PF-32 protein; ssgcid, 27.4 47 0.0016 29.3 3.8 38 6-44 26-65 (267)
196 4grd_A N5-CAIR mutase, phospho 27.2 2.6E+02 0.0088 22.9 10.7 143 286-455 11-166 (173)
197 1p9o_A Phosphopantothenoylcyst 27.2 40 0.0014 30.9 3.2 23 22-44 67-89 (313)
198 3bul_A Methionine synthase; tr 27.1 60 0.002 32.6 4.7 44 6-49 98-141 (579)
199 4gi5_A Quinone reductase; prot 27.1 97 0.0033 27.8 5.8 36 6-41 22-60 (280)
200 3hdg_A Uncharacterized protein 26.9 1.3E+02 0.0044 22.5 6.0 48 384-433 78-125 (137)
201 2qyt_A 2-dehydropantoate 2-red 26.9 23 0.00079 32.2 1.7 36 1-42 4-45 (317)
202 2an1_A Putative kinase; struct 26.6 29 0.001 31.3 2.3 31 360-392 60-94 (292)
203 3ew7_A LMO0794 protein; Q8Y8U8 26.5 91 0.0031 26.0 5.4 33 7-43 1-33 (221)
204 3gpi_A NAD-dependent epimerase 26.5 74 0.0025 28.1 5.0 32 6-42 3-34 (286)
205 1ks9_A KPA reductase;, 2-dehyd 26.4 42 0.0014 29.9 3.3 31 7-42 1-31 (291)
206 3d3j_A Enhancer of mRNA-decapp 26.0 40 0.0014 30.8 3.0 33 7-42 133-167 (306)
207 1jzt_A Hypothetical 27.5 kDa p 25.9 41 0.0014 29.6 3.0 33 7-42 59-93 (246)
208 3of5_A Dethiobiotin synthetase 25.9 63 0.0022 27.9 4.2 36 6-41 3-40 (228)
209 3hwr_A 2-dehydropantoate 2-red 25.8 39 0.0013 30.9 3.0 40 6-50 19-58 (318)
210 3k96_A Glycerol-3-phosphate de 25.8 35 0.0012 32.0 2.7 33 6-43 29-61 (356)
211 1o97_C Electron transferring f 25.6 62 0.0021 28.8 4.2 42 97-140 101-148 (264)
212 3ip3_A Oxidoreductase, putativ 25.6 3.3E+02 0.011 24.7 9.5 60 352-411 54-120 (337)
213 2gdz_A NAD+-dependent 15-hydro 25.5 1E+02 0.0035 27.0 5.7 39 1-42 1-39 (267)
214 2vsy_A XCC0866; transferase, g 25.5 66 0.0023 31.9 4.9 38 6-43 205-246 (568)
215 3eq2_A Probable two-component 25.4 3.4E+02 0.012 25.1 9.8 48 384-433 76-124 (394)
216 3g1w_A Sugar ABC transporter; 25.3 3.4E+02 0.012 23.7 10.5 85 6-139 4-94 (305)
217 3trh_A Phosphoribosylaminoimid 25.3 2.8E+02 0.0095 22.6 10.2 139 287-452 6-157 (169)
218 3l4b_C TRKA K+ channel protien 25.3 20 0.0007 30.7 0.9 32 7-43 1-32 (218)
219 1u0t_A Inorganic polyphosphate 25.2 23 0.00079 32.4 1.3 30 362-393 74-107 (307)
220 3d3k_A Enhancer of mRNA-decapp 25.1 43 0.0015 29.7 3.0 33 7-42 86-120 (259)
221 1zi8_A Carboxymethylenebutenol 25.0 84 0.0029 26.3 4.9 36 7-42 28-63 (236)
222 3h2s_A Putative NADH-flavin re 24.9 1E+02 0.0035 25.9 5.4 33 7-43 1-33 (224)
223 3ec7_A Putative dehydrogenase; 24.9 2.3E+02 0.008 26.0 8.4 108 288-412 25-141 (357)
224 4fbl_A LIPS lipolytic enzyme; 24.9 50 0.0017 29.2 3.5 33 10-42 54-86 (281)
225 1yt5_A Inorganic polyphosphate 24.9 21 0.00072 31.7 0.9 51 367-433 43-96 (258)
226 3l77_A Short-chain alcohol deh 24.8 72 0.0025 27.3 4.5 33 7-42 2-34 (235)
227 1ydg_A Trp repressor binding p 24.7 97 0.0033 26.0 5.2 37 6-42 6-43 (211)
228 1pno_A NAD(P) transhydrogenase 24.7 76 0.0026 25.9 4.0 36 7-44 24-64 (180)
229 1d4o_A NADP(H) transhydrogenas 24.4 77 0.0026 25.9 4.0 36 7-44 23-63 (184)
230 2fb6_A Conserved hypothetical 24.4 68 0.0023 24.4 3.6 39 6-44 7-49 (117)
231 3ezy_A Dehydrogenase; structur 24.4 1.9E+02 0.0067 26.4 7.7 63 353-415 52-121 (344)
232 2v4n_A Multifunctional protein 24.3 98 0.0033 27.3 5.1 38 7-46 2-39 (254)
233 1efv_B Electron transfer flavo 24.0 70 0.0024 28.3 4.2 42 97-140 105-152 (255)
234 3ohs_X Trans-1,2-dihydrobenzen 24.0 2.8E+02 0.0097 25.1 8.7 62 354-415 55-123 (334)
235 3nrb_A Formyltetrahydrofolate 24.0 2.7E+02 0.0094 24.9 8.2 117 303-445 152-270 (287)
236 3obi_A Formyltetrahydrofolate 23.8 2.9E+02 0.0098 24.8 8.3 117 303-445 153-271 (288)
237 3czc_A RMPB; alpha/beta sandwi 23.7 69 0.0024 24.0 3.5 37 6-42 18-56 (110)
238 3g0o_A 3-hydroxyisobutyrate de 23.7 47 0.0016 30.1 3.1 32 6-42 7-38 (303)
239 3cea_A MYO-inositol 2-dehydrog 23.6 4.1E+02 0.014 24.0 10.2 42 355-396 61-107 (346)
240 3ucx_A Short chain dehydrogena 23.5 1.1E+02 0.0038 26.7 5.5 34 6-42 10-43 (264)
241 3e61_A Putative transcriptiona 23.5 3.2E+02 0.011 23.5 8.7 29 110-138 64-93 (277)
242 3qjg_A Epidermin biosynthesis 23.4 2.6E+02 0.009 22.9 7.3 115 287-412 6-143 (175)
243 3iqw_A Tail-anchored protein t 23.4 78 0.0027 29.3 4.6 39 6-44 15-54 (334)
244 4e3z_A Putative oxidoreductase 23.4 81 0.0028 27.8 4.6 34 6-42 25-58 (272)
245 3ius_A Uncharacterized conserv 23.1 74 0.0025 28.1 4.3 33 6-43 5-37 (286)
246 2ew2_A 2-dehydropantoate 2-red 23.1 47 0.0016 30.0 3.0 32 6-42 3-34 (316)
247 3q9l_A Septum site-determining 23.0 86 0.003 27.2 4.7 35 9-43 5-40 (260)
248 3kkj_A Amine oxidase, flavin-c 22.9 45 0.0015 28.7 2.8 29 8-41 4-32 (336)
249 3l3b_A ES1 family protein; ssg 22.8 1.6E+02 0.0054 25.7 6.2 37 7-44 24-65 (242)
250 1byi_A Dethiobiotin synthase; 22.8 81 0.0028 26.6 4.4 33 8-40 3-36 (224)
251 1bg6_A N-(1-D-carboxylethyl)-L 22.7 49 0.0017 30.6 3.1 32 6-42 4-35 (359)
252 3ug7_A Arsenical pump-driving 22.7 98 0.0034 28.7 5.2 38 7-44 26-64 (349)
253 3lf2_A Short chain oxidoreduct 22.7 96 0.0033 27.2 5.0 34 6-42 7-40 (265)
254 4ao6_A Esterase; hydrolase, th 22.7 70 0.0024 27.9 4.0 38 6-43 55-94 (259)
255 1zh8_A Oxidoreductase; TM0312, 22.7 2.2E+02 0.0075 26.0 7.6 62 353-414 70-138 (340)
256 2o8n_A APOA-I binding protein; 22.7 57 0.0019 29.1 3.3 33 7-42 80-114 (265)
257 1ehi_A LMDDL2, D-alanine:D-lac 22.7 72 0.0025 29.9 4.3 37 6-42 3-44 (377)
258 1fjh_A 3alpha-hydroxysteroid d 22.6 99 0.0034 26.7 5.0 33 7-42 1-33 (257)
259 3f6r_A Flavodoxin; FMN binding 22.6 92 0.0031 24.3 4.4 38 7-44 2-40 (148)
260 1efp_B ETF, protein (electron 22.6 70 0.0024 28.2 3.9 40 98-139 103-148 (252)
261 2ho3_A Oxidoreductase, GFO/IDH 22.6 4.2E+02 0.014 23.7 10.2 60 354-414 52-118 (325)
262 3uug_A Multiple sugar-binding 22.5 4.1E+02 0.014 23.5 11.4 84 6-139 3-92 (330)
263 4g65_A TRK system potassium up 22.4 20 0.00067 35.1 0.2 33 6-43 3-35 (461)
264 2pd6_A Estradiol 17-beta-dehyd 22.3 1.1E+02 0.0037 26.5 5.3 39 1-42 1-39 (264)
265 2fsv_C NAD(P) transhydrogenase 22.1 88 0.003 26.1 4.0 36 7-44 47-87 (203)
266 3gl9_A Response regulator; bet 21.9 99 0.0034 22.8 4.3 47 384-432 75-121 (122)
267 3hly_A Flavodoxin-like domain; 21.7 1.2E+02 0.0039 24.4 4.8 36 7-42 1-37 (161)
268 2nly_A BH1492 protein, diverge 21.7 2.3E+02 0.008 24.7 7.0 39 97-136 114-155 (245)
269 3crn_A Response regulator rece 21.6 1.6E+02 0.0054 21.9 5.5 48 384-433 74-121 (132)
270 1djl_A Transhydrogenase DIII; 21.5 91 0.0031 26.1 4.0 36 7-44 46-86 (207)
271 2wtm_A EST1E; hydrolase; 1.60A 21.5 1.1E+02 0.0037 26.1 5.0 35 8-42 28-64 (251)
272 2l2q_A PTS system, cellobiose- 21.5 1E+02 0.0035 22.9 4.1 36 6-41 4-39 (109)
273 3f8d_A Thioredoxin reductase ( 21.4 50 0.0017 29.7 2.8 32 7-43 16-47 (323)
274 3h7a_A Short chain dehydrogena 21.4 99 0.0034 26.9 4.7 34 6-42 6-39 (252)
275 2raf_A Putative dinucleotide-b 21.3 58 0.002 27.6 3.0 32 6-42 19-50 (209)
276 2gkg_A Response regulator homo 21.3 1E+02 0.0035 22.5 4.3 46 384-432 79-124 (127)
277 3s40_A Diacylglycerol kinase; 21.3 71 0.0024 29.0 3.8 83 286-393 9-97 (304)
278 1j6u_A UDP-N-acetylmuramate-al 21.3 70 0.0024 31.2 4.0 32 6-41 12-43 (469)
279 2pk3_A GDP-6-deoxy-D-LYXO-4-he 21.2 78 0.0027 28.5 4.1 34 6-42 11-44 (321)
280 3guy_A Short-chain dehydrogena 21.2 70 0.0024 27.3 3.6 33 7-42 1-33 (230)
281 2y0c_A BCEC, UDP-glucose dehyd 21.1 57 0.002 31.9 3.3 32 6-42 8-39 (478)
282 3u7q_A Nitrogenase molybdenum- 21.0 57 0.002 32.1 3.2 37 97-138 406-442 (492)
283 3ego_A Probable 2-dehydropanto 21.0 42 0.0014 30.6 2.2 33 6-44 2-34 (307)
284 4dhx_B Enhancer of yellow 2 tr 20.9 1.2E+02 0.004 22.5 4.2 50 421-475 27-76 (101)
285 1g3q_A MIND ATPase, cell divis 20.9 1E+02 0.0035 26.2 4.7 36 8-43 4-40 (237)
286 2ph1_A Nucleotide-binding prot 20.9 1E+02 0.0035 26.9 4.7 37 8-44 20-57 (262)
287 3foj_A Uncharacterized protein 20.8 1.5E+02 0.0052 21.2 5.0 36 7-47 57-92 (100)
288 2zki_A 199AA long hypothetical 20.8 98 0.0034 25.6 4.4 36 6-42 4-40 (199)
289 3kux_A Putative oxidoreductase 20.6 4.8E+02 0.016 23.7 10.9 78 353-432 55-141 (352)
290 3zq6_A Putative arsenical pump 20.6 98 0.0033 28.3 4.6 38 7-44 14-52 (324)
291 1e2b_A Enzyme IIB-cellobiose; 20.5 2E+02 0.0069 21.2 5.6 37 6-42 3-39 (106)
292 3dqp_A Oxidoreductase YLBE; al 20.4 1.2E+02 0.0042 25.3 5.0 33 7-43 1-33 (219)
293 3dkr_A Esterase D; alpha beta 20.3 93 0.0032 26.0 4.3 36 7-42 22-57 (251)
294 3l6u_A ABC-type sugar transpor 20.2 4.2E+02 0.014 22.9 10.6 37 100-139 57-97 (293)
295 4gbj_A 6-phosphogluconate dehy 20.2 88 0.003 28.2 4.2 30 7-41 6-35 (297)
296 1nff_A Putative oxidoreductase 20.2 1.5E+02 0.0051 25.8 5.7 33 7-42 7-39 (260)
297 3cky_A 2-hydroxymethyl glutara 20.2 1E+02 0.0034 27.6 4.6 32 6-42 4-35 (301)
298 3ghy_A Ketopantoate reductase 20.2 51 0.0017 30.4 2.6 39 6-49 3-41 (335)
299 4dmm_A 3-oxoacyl-[acyl-carrier 20.0 1.2E+02 0.004 26.8 4.9 33 7-42 28-60 (269)
300 3n0v_A Formyltetrahydrofolate 20.0 4E+02 0.014 23.8 8.4 118 303-446 153-272 (286)
No 1
>3hbf_A Flavonoid 3-O-glucosyltransferase; glycosyltransferase, GT-B fold, GT1, phenylpropanoid metabolism; HET: UDP MYC; 2.10A {Medicago truncatula} SCOP: c.87.1.0 PDB: 3hbj_A*
Probab=100.00 E-value=8.5e-68 Score=526.39 Aligned_cols=437 Identities=27% Similarity=0.472 Sum_probs=351.9
Q ss_pred CCCCCCCEEEEEcCCCCCCHHHHHHHHHHHHhCC--CeEEEEeCCccchhccCCCcccccccCCCCeEEEeCCCCCCCCC
Q 011792 1 MEQTRVPHVVLLPFPAYGHIKPMLSLAKLFSHAG--FRITFVNTDQYHDRLFGNTDVTAFYKHFPNFLCTSIPDGLPPDN 78 (477)
Q Consensus 1 m~~~~~~~il~~~~~~~GHv~p~l~La~~L~~rG--H~Vt~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 78 (477)
|....+.||+++|+|++||++|++.||+.|+++| +.|||++++.+..++.+... ...+++.|..+|++++.+.
T Consensus 8 M~~~~~~hvv~~P~p~~GHi~P~l~Lak~L~~~g~~~~vT~~~t~~~~~~~~~~~~-----~~~~~i~~~~ipdglp~~~ 82 (454)
T 3hbf_A 8 MNGNNLLHVAVLAFPFGTHAAPLLSLVKKIATEAPKVTFSFFCTTTTNDTLFSRSN-----EFLPNIKYYNVHDGLPKGY 82 (454)
T ss_dssp ----CCCEEEEECCCSSSSHHHHHHHHHHHHHHCTTSEEEEEECHHHHHHSCSSSS-----CCCTTEEEEECCCCCCTTC
T ss_pred ccCCCCCEEEEEcCCcccHHHHHHHHHHHHHhCCCCEEEEEEeCHHHHHhhhcccc-----cCCCCceEEecCCCCCCCc
Confidence 4444478999999999999999999999999999 99999999777777655321 1135699999999888754
Q ss_pred CCCCCChHHHHHhhchh----cHHHHHHHHhcCCCCCeEEEECCCcchHHHHHHHcCCCeEEEccCchhhHHHHhhhhhh
Q 011792 79 PRFGIYTKDWFCSNKPV----SKLAFRQLLMTPGRLPTCIISDSIMSFAIDVAEELNIPIITFRPYSAYCSWSDFHFSKL 154 (477)
Q Consensus 79 ~~~~~~~~~~~~~~~~~----~~~~l~~~l~~~~~~~D~vI~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~~ 154 (477)
.. ..+....+..+.+. ..+.+.+++++...++||||+|.++.|+..+|+++|||++.+++++++.+..+.+.+..
T Consensus 83 ~~-~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~iI~D~~~~w~~~vA~~lgIP~~~f~t~~a~~~~~~~~~~~~ 161 (454)
T 3hbf_A 83 VS-SGNPREPIFLFIKAMQENFKHVIDEAVAETGKNITCLVTDAFFWFGADLAEEMHAKWVPLWTAGPHSLLTHVYTDLI 161 (454)
T ss_dssp CC-CSCTTHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEETTCTTHHHHHHHTTCEEEEEECSCHHHHHHHHTHHHH
T ss_pred cc-cCChHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCcEEEECCcchHHHHHHHHhCCCEEEEeCccHHHHHHHHhhHHH
Confidence 22 22223333333333 33444444444334899999999999999999999999999999999988887766544
Q ss_pred hhc-CCCCCCCCCCCCCceecCCCCCCCCCCCCCccccCCCCCChHHHHHHHhhhcccCCceEEEcChhhhchHHHHHhh
Q 011792 155 AEE-GELPVTDENFDKPVTCIPELENIFRNRDLPSICRHGGPDDPILQTFIRDTSATTRTSALVINTFNEIEGPIISKLG 233 (477)
Q Consensus 155 ~~~-~~~p~~~~~~~~~~~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ns~~~le~p~l~~~~ 233 (477)
... +..+. .......++|+++. +..++++.++.. ...+.....+.+..+....++.+++||+++||++.++.++
T Consensus 162 ~~~~~~~~~---~~~~~~~~iPg~p~-~~~~dlp~~~~~-~~~~~~~~~~~~~~~~~~~~~~vl~ns~~eLE~~~~~~~~ 236 (454)
T 3hbf_A 162 REKTGSKEV---HDVKSIDVLPGFPE-LKASDLPEGVIK-DIDVPFATMLHKMGLELPRANAVAINSFATIHPLIENELN 236 (454)
T ss_dssp HHTCCHHHH---TTSSCBCCSTTSCC-BCGGGSCTTSSS-CTTSHHHHHHHHHHHHGGGSSCEEESSCGGGCHHHHHHHH
T ss_pred HhhcCCCcc---ccccccccCCCCCC-cChhhCchhhcc-CCchHHHHHHHHHHHhhccCCEEEECChhHhCHHHHHHHH
Confidence 322 11000 11223446788887 888889887654 4444556666677777788999999999999999999999
Q ss_pred hcCCceeEeCccccccccccccccccCCCCccCcccCccccccccccccCCCCCcEEEEEecCcccCCHHHHHHHHHHHH
Q 011792 234 SRLTKIYTVGPLHALLKSRIQEDSVESSPLESNNCVLSKEDRSCMTWLGSQPSRSVLYVSFGSFIKLSGDQILEFWHGIV 313 (477)
Q Consensus 234 ~~~p~~~~vG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~a~~ 313 (477)
+.+|++++|||++....+ ..+..++++.+|++.++++++|||||||+...+.+.+..++.+++
T Consensus 237 ~~~~~v~~vGPl~~~~~~-----------------~~~~~~~~~~~wLd~~~~~~vVyvsfGS~~~~~~~~~~el~~~l~ 299 (454)
T 3hbf_A 237 SKFKLLLNVGPFNLTTPQ-----------------RKVSDEHGCLEWLDQHENSSVVYISFGSVVTPPPHELTALAESLE 299 (454)
T ss_dssp TTSSCEEECCCHHHHSCC-----------------SCCCCTTCHHHHHHTSCTTCEEEEECCSSCCCCHHHHHHHHHHHH
T ss_pred hcCCCEEEECCccccccc-----------------ccccchHHHHHHHhcCCCCceEEEecCCCCcCCHHHHHHHHHHHH
Confidence 999999999999875432 111235668899998888999999999999888999999999999
Q ss_pred hCCCcEEEEEecCCcCCCCCCCCCchhhHhhhcCCCceeeccCHHHHHhcccccccccccCchhHHHHhhcCCceecCCc
Q 011792 314 NSGKGFLWVIRSDLIDGESGVGPVPAELDQGTKERGCIVSWAPQEEVLAHQAIGGFLTHSGWNSTLESMVAGVPMICWPQ 393 (477)
Q Consensus 314 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~~p~~~ll~~~~~~~~I~HGG~gs~~eal~~GvP~l~~P~ 393 (477)
..+.+|||+++.+... .+++++.++.++|+++++|+||.+||+|+++++||||||+||++|++++|||||++|+
T Consensus 300 ~~~~~flw~~~~~~~~------~lp~~~~~~~~~~~~vv~w~Pq~~vL~h~~v~~fvtH~G~~S~~Eal~~GvP~i~~P~ 373 (454)
T 3hbf_A 300 ECGFPFIWSFRGDPKE------KLPKGFLERTKTKGKIVAWAPQVEILKHSSVGVFLTHSGWNSVLECIVGGVPMISRPF 373 (454)
T ss_dssp HHCCCEEEECCSCHHH------HSCTTHHHHTTTTEEEESSCCHHHHHHSTTEEEEEECCCHHHHHHHHHHTCCEEECCC
T ss_pred hCCCeEEEEeCCcchh------cCCHhHHhhcCCceEEEeeCCHHHHHhhcCcCeEEecCCcchHHHHHHcCCCEecCcc
Confidence 9999999999653221 4778888888899999999999999999998899999999999999999999999999
Q ss_pred cchhhhhHHHHhhhhceeeecc-CCCCHHHHHHHHHHHHhH-hHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHH
Q 011792 394 VGDQQVNSRCVSEIWKIGFDMK-DTCDRSTIEKLVRDLMDN-KRDKIMESTVQIAKMARDAVKEGGSSYRNLEKLIEDIR 471 (477)
Q Consensus 394 ~~DQ~~na~rv~~~~G~G~~l~-~~~~~~~l~~~v~~ll~~-~~~~~~~~a~~l~~~~~~~~~~gg~~~~~~~~~i~~~~ 471 (477)
+.||+.||+++++.+|+|+.++ +.+++++|.++|+++|+| ++++||+||+++++++++++++|||++.++++||+++.
T Consensus 374 ~~DQ~~Na~~v~~~~g~Gv~l~~~~~~~~~l~~av~~ll~~~~~~~~r~~a~~l~~~~~~a~~~gGsS~~~l~~~v~~i~ 453 (454)
T 3hbf_A 374 FGDQGLNTILTESVLEIGVGVDNGVLTKESIKKALELTMSSEKGGIMRQKIVKLKESAFKAVEQNGTSAMDFTTLIQIVT 453 (454)
T ss_dssp STTHHHHHHHHHTTSCSEEECGGGSCCHHHHHHHHHHHHSSHHHHHHHHHHHHHHHHHHHHTSTTSHHHHHHHHHHHHHT
T ss_pred cccHHHHHHHHHHhhCeeEEecCCCCCHHHHHHHHHHHHCCChHHHHHHHHHHHHHHHHHhhccCCCHHHHHHHHHHHHh
Confidence 9999999999966469999998 589999999999999985 34589999999999999999999999999999999874
No 2
>2pq6_A UDP-glucuronosyl/UDP-glucosyltransferase; glycosylation, isoflavonoid, uridine diphosphate glycosyltransferase; 2.10A {Medicago truncatula} SCOP: c.87.1.10
Probab=100.00 E-value=9.5e-65 Score=514.79 Aligned_cols=456 Identities=38% Similarity=0.692 Sum_probs=343.0
Q ss_pred CCEEEEEcCCCCCCHHHHHHHHHHHHhCCCeEEEEeCCccchhccCCCcccccccCCCCeEEEeCCCCCCCCC--CCCCC
Q 011792 6 VPHVVLLPFPAYGHIKPMLSLAKLFSHAGFRITFVNTDQYHDRLFGNTDVTAFYKHFPNFLCTSIPDGLPPDN--PRFGI 83 (477)
Q Consensus 6 ~~~il~~~~~~~GHv~p~l~La~~L~~rGH~Vt~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~--~~~~~ 83 (477)
++||+++|++++||++|++.||++|++|||+|||++++.+...+.+.... ......+++.|..+|++++... .....
T Consensus 8 ~~~vl~~p~p~~GHi~P~l~La~~L~~rG~~VT~v~t~~~~~~~~~~~~~-~~~~~~~~i~~~~l~~~lp~~~~~~~~~~ 86 (482)
T 2pq6_A 8 KPHVVMIPYPVQGHINPLFKLAKLLHLRGFHITFVNTEYNHKRLLKSRGP-KAFDGFTDFNFESIPDGLTPMEGDGDVSQ 86 (482)
T ss_dssp CCEEEEECCSSHHHHHHHHHHHHHHHHTTCEEEEEEEHHHHHHHC-------------CEEEEEECCCCC---------C
T ss_pred CCEEEEecCccchhHHHHHHHHHHHHhCCCeEEEEeCCchhhhhcccccc-ccccCCCceEEEECCCCCCCcccccCcch
Confidence 57999999999999999999999999999999999998776666542110 0001113599999998776521 11223
Q ss_pred ChHHHHHhhchhcHHHHHHHHhcC-----CCCCeEEEECCCcchHHHHHHHcCCCeEEEccCchhhHHHHhhhhhhhhcC
Q 011792 84 YTKDWFCSNKPVSKLAFRQLLMTP-----GRLPTCIISDSIMSFAIDVAEELNIPIITFRPYSAYCSWSDFHFSKLAEEG 158 (477)
Q Consensus 84 ~~~~~~~~~~~~~~~~l~~~l~~~-----~~~~D~vI~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~ 158 (477)
....++..+...+.+.++++++.. ..+||+||+|.++.|+..+|+++|||++.++++++.......+++.+...+
T Consensus 87 ~~~~~~~~~~~~~~~~l~~ll~~l~~~~~~~~~d~vI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~ 166 (482)
T 2pq6_A 87 DVPTLCQSVRKNFLKPYCELLTRLNHSTNVPPVTCLVSDCCMSFTIQAAEEFELPNVLYFSSSACSLLNVMHFRSFVERG 166 (482)
T ss_dssp CHHHHHHHHTTSSHHHHHHHHHHHHTCSSSCCCCEEEEETTCTHHHHHHHHTTCCEEEEECSCHHHHHHHTTHHHHHHTT
T ss_pred hHHHHHHHHHHHhhHHHHHHHHHHhhhccCCCceEEEECCcchhHHHHHHHcCCCEEEEecccHHHHHHHHHHHHHHhcC
Confidence 455666666566778888888752 248999999999999999999999999999999987766665567666677
Q ss_pred CCCCCCCCC------CCCceecCCCCCCCCCCCCCccccCCCCCChHHHHHHHhhhcccCCceEEEcChhhhchHHHHHh
Q 011792 159 ELPVTDENF------DKPVTCIPELENIFRNRDLPSICRHGGPDDPILQTFIRDTSATTRTSALVINTFNEIEGPIISKL 232 (477)
Q Consensus 159 ~~p~~~~~~------~~~~~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ns~~~le~p~l~~~ 232 (477)
+.|...... .....++++++. +...+++.++............+....+...+++.+++||+++||++.++.+
T Consensus 167 ~~p~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vl~nt~~~le~~~~~~~ 245 (482)
T 2pq6_A 167 IIPFKDESYLTNGCLETKVDWIPGLKN-FRLKDIVDFIRTTNPNDIMLEFFIEVADRVNKDTTILLNTFNELESDVINAL 245 (482)
T ss_dssp CSSCSSGGGGTSSGGGCBCCSSTTCCS-CBGGGSCGGGCCSCTTCHHHHHHHHHHHTCCTTCCEEESSCGGGGHHHHHHH
T ss_pred CCCCccccccccccccCccccCCCCCC-CchHHCchhhccCCcccHHHHHHHHHHHhhccCCEEEEcChHHHhHHHHHHH
Confidence 877653221 111122344443 4445555544332222333444444445567889999999999999999999
Q ss_pred hhcCCceeEeCccccc-cccccccccccCCCCccCcccCccccccccccccCCCCCcEEEEEecCcccCCHHHHHHHHHH
Q 011792 233 GSRLTKIYTVGPLHAL-LKSRIQEDSVESSPLESNNCVLSKEDRSCMTWLGSQPSRSVLYVSFGSFIKLSGDQILEFWHG 311 (477)
Q Consensus 233 ~~~~p~~~~vG~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~a 311 (477)
++.+|++++|||++.. +.+.... ... +.+...|+.+.++.+|++.++++++|||||||....+.+.+..++.+
T Consensus 246 ~~~~~~v~~VGPl~~~~~~~~~~~----~~~--~~~~~l~~~~~~~~~wld~~~~~~vv~vs~GS~~~~~~~~~~~~~~~ 319 (482)
T 2pq6_A 246 SSTIPSIYPIGPLPSLLKQTPQIH----QLD--SLDSNLWKEDTECLDWLESKEPGSVVYVNFGSTTVMTPEQLLEFAWG 319 (482)
T ss_dssp HTTCTTEEECCCHHHHHHTSTTGG----GGC--C---------CHHHHHHTTSCTTCEEEEECCSSSCCCHHHHHHHHHH
T ss_pred HHhCCcEEEEcCCccccccccccc----ccc--cccccccccchHHHHHHhcCCCCceEEEecCCcccCCHHHHHHHHHH
Confidence 9888999999999864 2210000 000 00012233455688999987788999999999988788889999999
Q ss_pred HHhCCCcEEEEEecCCcCCCCCCCCCchhhHhhhcCCCceeeccCHHHHHhcccccccccccCchhHHHHhhcCCceecC
Q 011792 312 IVNSGKGFLWVIRSDLIDGESGVGPVPAELDQGTKERGCIVSWAPQEEVLAHQAIGGFLTHSGWNSTLESMVAGVPMICW 391 (477)
Q Consensus 312 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~~p~~~ll~~~~~~~~I~HGG~gs~~eal~~GvP~l~~ 391 (477)
++..+.+|||+++.+... |....+++++.++.++|+++++|+||.++|+|+++++||||||+||++|++++|||+|++
T Consensus 320 l~~~~~~~l~~~~~~~~~--~~~~~l~~~~~~~~~~~~~v~~~~pq~~~L~h~~~~~~vth~G~~s~~Eal~~GvP~i~~ 397 (482)
T 2pq6_A 320 LANCKKSFLWIIRPDLVI--GGSVIFSSEFTNEIADRGLIASWCPQDKVLNHPSIGGFLTHCGWNSTTESICAGVPMLCW 397 (482)
T ss_dssp HHHTTCEEEEECCGGGST--TTGGGSCHHHHHHHTTTEEEESCCCHHHHHTSTTEEEEEECCCHHHHHHHHHHTCCEEEC
T ss_pred HHhcCCcEEEEEcCCccc--cccccCcHhHHHhcCCCEEEEeecCHHHHhcCCCCCEEEecCCcchHHHHHHcCCCEEec
Confidence 999999999999754222 111136788877888999999999999999999999999999999999999999999999
Q ss_pred CccchhhhhHHHHhhhhceeeeccCCCCHHHHHHHHHHHHhHh-HHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHH
Q 011792 392 PQVGDQQVNSRCVSEIWKIGFDMKDTCDRSTIEKLVRDLMDNK-RDKIMESTVQIAKMARDAVKEGGSSYRNLEKLIEDI 470 (477)
Q Consensus 392 P~~~DQ~~na~rv~~~~G~G~~l~~~~~~~~l~~~v~~ll~~~-~~~~~~~a~~l~~~~~~~~~~gg~~~~~~~~~i~~~ 470 (477)
|++.||+.||+++++++|+|+.+++.+++++|.++|+++|+|+ +++|++||+++++.+++++++||++.+++++||+++
T Consensus 398 P~~~dQ~~na~~~~~~~G~g~~l~~~~~~~~l~~~i~~ll~~~~~~~~r~~a~~l~~~~~~a~~~gGss~~~l~~~v~~~ 477 (482)
T 2pq6_A 398 PFFADQPTDCRFICNEWEIGMEIDTNVKREELAKLINEVIAGDKGKKMKQKAMELKKKAEENTRPGGCSYMNLNKVIKDV 477 (482)
T ss_dssp CCSTTHHHHHHHHHHTSCCEEECCSSCCHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHTSTTCHHHHHHHHHHHHT
T ss_pred CcccchHHHHHHHHHHhCEEEEECCCCCHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHH
Confidence 9999999999999755899999987799999999999999861 227999999999999999999999999999999987
Q ss_pred H
Q 011792 471 R 471 (477)
Q Consensus 471 ~ 471 (477)
.
T Consensus 478 ~ 478 (482)
T 2pq6_A 478 L 478 (482)
T ss_dssp T
T ss_pred H
Confidence 4
No 3
>2c1x_A UDP-glucose flavonoid 3-O glycosyltransferase; WINE, catalysis, glycosylation; HET: UDP B3P; 1.9A {Vitis vinifera} SCOP: c.87.1.10 PDB: 2c1z_A* 2c9z_A*
Probab=100.00 E-value=3.3e-61 Score=484.04 Aligned_cols=441 Identities=26% Similarity=0.466 Sum_probs=322.5
Q ss_pred CCCCC-CCEEEEEcCCCCCCHHHHHHHHHHHHhCCCe--EEEEeCCccchhccCCCcccccccCCCCeEEEeCCCCCCCC
Q 011792 1 MEQTR-VPHVVLLPFPAYGHIKPMLSLAKLFSHAGFR--ITFVNTDQYHDRLFGNTDVTAFYKHFPNFLCTSIPDGLPPD 77 (477)
Q Consensus 1 m~~~~-~~~il~~~~~~~GHv~p~l~La~~L~~rGH~--Vt~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 77 (477)
|.+.. ++||+++|+|++||++|+++||+.|++|||+ ||+++++.+.+.+.+.... ...+++.|..++++++..
T Consensus 1 m~~~~~~~hvv~~p~p~~GHi~P~l~la~~L~~rGh~v~vt~~~t~~~~~~~~~~~~~----~~~~~i~~~~i~~glp~~ 76 (456)
T 2c1x_A 1 MSQTTTNPHVAVLAFPFSTHAAPLLAVVRRLAAAAPHAVFSFFSTSQSNASIFHDSMH----TMQCNIKSYDISDGVPEG 76 (456)
T ss_dssp ------CCEEEEECCCSSSSHHHHHHHHHHHHHHCTTSEEEEEECHHHHHHHC-----------CTTEEEEECCCCCCTT
T ss_pred CCCCCCCCEEEEEcCcccchHHHHHHHHHHHHhCCCCeEEEEEeCchhHHHhhccccc----cCCCceEEEeCCCCCCCc
Confidence 55433 6899999999999999999999999999765 5778876554444332110 012469999998877654
Q ss_pred CCCCCCChHHHHHhhchhcHH----HHHHHHhcCCCCCeEEEECCCcchHHHHHHHcCCCeEEEccCchhhHHHHhhhhh
Q 011792 78 NPRFGIYTKDWFCSNKPVSKL----AFRQLLMTPGRLPTCIISDSIMSFAIDVAEELNIPIITFRPYSAYCSWSDFHFSK 153 (477)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~----~l~~~l~~~~~~~D~vI~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~ 153 (477)
... .......+..+.+.... .+.+++++...+||+||+|.++.|+..+|+++|||++.+++++++.+....+.+.
T Consensus 77 ~~~-~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~d~vI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~~~~~~~~~~ 155 (456)
T 2c1x_A 77 YVF-AGRPQEDIELFTRAAPESFRQGMVMAVAETGRPVSCLVADAFIWFAADMAAEMGVAWLPFWTAGPNSLSTHVYIDE 155 (456)
T ss_dssp CCC-CCCTTHHHHHHHHHHHHHHHHHHHHHHHHHTCCCCEEEEETTSTTHHHHHHHHTCEEEEEECSCHHHHHHHHTHHH
T ss_pred ccc-cCChHHHHHHHHHHhHHHHHHHHHHHHhccCCCceEEEECCchHhHHHHHHHhCCCEEEEeCccHHHHHHHhhhHH
Confidence 311 11222333333332233 3333333322489999999999999999999999999999998876655443332
Q ss_pred hhhc-CCCCCCCCCCCCCceecCCCCCCCCCCCCCccccCCCCCChHHHHHHHhhhcccCCceEEEcChhhhchHHHHHh
Q 011792 154 LAEE-GELPVTDENFDKPVTCIPELENIFRNRDLPSICRHGGPDDPILQTFIRDTSATTRTSALVINTFNEIEGPIISKL 232 (477)
Q Consensus 154 ~~~~-~~~p~~~~~~~~~~~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ns~~~le~p~l~~~ 232 (477)
.... ++.+. .........++++++. +..++++..+............+.+......+++.+++||+++||++.++.+
T Consensus 156 ~~~~~~~~~~-~~~~~~~~~~~pg~~~-~~~~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~vl~ns~~~le~~~~~~~ 233 (456)
T 2c1x_A 156 IREKIGVSGI-QGREDELLNFIPGMSK-VRFRDLQEGIVFGNLNSLFSRMLHRMGQVLPKATAVFINSFEELDDSLTNDL 233 (456)
T ss_dssp HHHHHCSSCC-TTCTTCBCTTSTTCTT-CBGGGSCTTTSSSCTTSHHHHHHHHHHHHGGGSSCEEESSCGGGCHHHHHHH
T ss_pred HHhccCCccc-ccccccccccCCCCCc-ccHHhCchhhcCCCcccHHHHHHHHHHHhhhhCCEEEECChHHHhHHHHHHH
Confidence 2111 22221 0111122234566665 5555565433221112223333333334457789999999999999999999
Q ss_pred hhcCCceeEeCccccccccccccccccCCCCccCcccCccccccccccccCCCCCcEEEEEecCcccCCHHHHHHHHHHH
Q 011792 233 GSRLTKIYTVGPLHALLKSRIQEDSVESSPLESNNCVLSKEDRSCMTWLGSQPSRSVLYVSFGSFIKLSGDQILEFWHGI 312 (477)
Q Consensus 233 ~~~~p~~~~vG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~a~ 312 (477)
++..|++++|||++..... ..+..+.++.+|++.++++++|||||||....+.+.+..++.++
T Consensus 234 ~~~~~~~~~vGpl~~~~~~-----------------~~~~~~~~~~~wl~~~~~~~vv~vs~GS~~~~~~~~~~~~~~~l 296 (456)
T 2c1x_A 234 KSKLKTYLNIGPFNLITPP-----------------PVVPNTTGCLQWLKERKPTSVVYISFGTVTTPPPAEVVALSEAL 296 (456)
T ss_dssp HHHSSCEEECCCHHHHC--------------------------CHHHHHHTSCTTCEEEEECCSSCCCCHHHHHHHHHHH
T ss_pred HhcCCCEEEecCcccCccc-----------------ccccchhhHHHHHhcCCCcceEEEecCccccCCHHHHHHHHHHH
Confidence 9888999999999865321 00123445788999877889999999999988888999999999
Q ss_pred HhCCCcEEEEEecCCcCCCCCCCCCchhhHhhhcCCCceeeccCHHHHHhcccccccccccCchhHHHHhhcCCceecCC
Q 011792 313 VNSGKGFLWVIRSDLIDGESGVGPVPAELDQGTKERGCIVSWAPQEEVLAHQAIGGFLTHSGWNSTLESMVAGVPMICWP 392 (477)
Q Consensus 313 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~~p~~~ll~~~~~~~~I~HGG~gs~~eal~~GvP~l~~P 392 (477)
+..+.+|||+++..... .+++++.++.++|+++++|+||.++|+|+++++||||||+||++|++++|||+|++|
T Consensus 297 ~~~~~~~lw~~~~~~~~------~l~~~~~~~~~~~~~v~~w~pq~~vL~h~~~~~fvth~G~~S~~Eal~~GvP~i~~P 370 (456)
T 2c1x_A 297 EASRVPFIWSLRDKARV------HLPEGFLEKTRGYGMVVPWAPQAEVLAHEAVGAFVTHCGWNSLWESVAGGVPLICRP 370 (456)
T ss_dssp HHHTCCEEEECCGGGGG------GSCTTHHHHHTTTEEEESCCCHHHHHTSTTEEEEEECCCHHHHHHHHHHTCCEEECC
T ss_pred HhcCCeEEEEECCcchh------hCCHHHHhhcCCceEEecCCCHHHHhcCCcCCEEEecCCcchHHHHHHhCceEEecC
Confidence 99999999999654221 467777777789999999999999999999999999999999999999999999999
Q ss_pred ccchhhhhHHHHhhhhceeeecc-CCCCHHHHHHHHHHHHhH-hHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHH
Q 011792 393 QVGDQQVNSRCVSEIWKIGFDMK-DTCDRSTIEKLVRDLMDN-KRDKIMESTVQIAKMARDAVKEGGSSYRNLEKLIEDI 470 (477)
Q Consensus 393 ~~~DQ~~na~rv~~~~G~G~~l~-~~~~~~~l~~~v~~ll~~-~~~~~~~~a~~l~~~~~~~~~~gg~~~~~~~~~i~~~ 470 (477)
++.||+.||+++++.+|+|+.++ +.+++++|.++|+++|+| ++++|++||+++++.+++++++|||+..++++||+++
T Consensus 371 ~~~dQ~~Na~~l~~~~g~g~~l~~~~~~~~~l~~~i~~ll~~~~~~~~r~~a~~l~~~~~~a~~~gGsS~~~l~~~v~~~ 450 (456)
T 2c1x_A 371 FFGDQRLNGRMVEDVLEIGVRIEGGVFTKSGLMSCFDQILSQEKGKKLRENLRALRETADRAVGPKGSSTENFITLVDLV 450 (456)
T ss_dssp CSTTHHHHHHHHHHTSCCEEECGGGSCCHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHTSTTCHHHHHHHHHHHHH
T ss_pred ChhhHHHHHHHHHHHhCeEEEecCCCcCHHHHHHHHHHHHCCCcHHHHHHHHHHHHHHHHHhhhcCCcHHHHHHHHHHHH
Confidence 99999999999976449999998 589999999999999986 1238999999999999999999999999999999988
Q ss_pred H
Q 011792 471 R 471 (477)
Q Consensus 471 ~ 471 (477)
.
T Consensus 451 ~ 451 (456)
T 2c1x_A 451 S 451 (456)
T ss_dssp T
T ss_pred H
Confidence 4
No 4
>2vch_A Hydroquinone glucosyltransferase; glycosyltransferase, N-glucosyltransferase, UDP-glucose- dependent, plant glycosyltransferase; HET: UDP; 1.45A {Arabidopsis thaliana} SCOP: c.87.1.10 PDB: 2vce_A* 2vg8_A*
Probab=100.00 E-value=1e-59 Score=476.16 Aligned_cols=444 Identities=29% Similarity=0.452 Sum_probs=317.6
Q ss_pred CCCCCCCEEEEEcCCCCCCHHHHHHHHHHHHhC-CCeEEEEeCCcc--chhccCCCcccccccCCCCeEEEeCCCCCCCC
Q 011792 1 MEQTRVPHVVLLPFPAYGHIKPMLSLAKLFSHA-GFRITFVNTDQY--HDRLFGNTDVTAFYKHFPNFLCTSIPDGLPPD 77 (477)
Q Consensus 1 m~~~~~~~il~~~~~~~GHv~p~l~La~~L~~r-GH~Vt~~~~~~~--~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 77 (477)
|+..+++||+++|+|++||++|+++||++|++| ||+|||+++..+ ...+.+. . .....++.|..++......
T Consensus 1 M~~~~~~~vl~~p~p~~GHv~P~l~La~~L~~r~Gh~Vt~~t~~~~~~~~~~~~~-~----~~~~~~i~~~~l~~~~~~~ 75 (480)
T 2vch_A 1 MEESKTPHVAIIPSPGMGHLIPLVEFAKRLVHLHGLTVTFVIAGEGPPSKAQRTV-L----DSLPSSISSVFLPPVDLTD 75 (480)
T ss_dssp -----CCEEEEECCSCHHHHHHHHHHHHHHHHHHCCEEEEEECCSSSCC-CHHHH-H----C-CCTTEEEEECCCCCCTT
T ss_pred CCCCCCcEEEEecCcchhHHHHHHHHHHHHHhCCCCEEEEEECCCcchhhhhhhh-c----cccCCCceEEEcCCCCCCC
Confidence 665557999999999999999999999999998 999999998763 3332210 0 0002358999998643211
Q ss_pred CCCCCCChHHHHHhhchhcHHHHHHHHhcC--CCCC-eEEEECCCcchHHHHHHHcCCCeEEEccCchhhHHHHhhhhhh
Q 011792 78 NPRFGIYTKDWFCSNKPVSKLAFRQLLMTP--GRLP-TCIISDSIMSFAIDVAEELNIPIITFRPYSAYCSWSDFHFSKL 154 (477)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~--~~~~-D~vI~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~~ 154 (477)
. .........+........+.+++++++. ..++ |+||+|.+..|+..+|+++|||++.+++++++.+....+++..
T Consensus 76 ~-~~~~~~~~~~~~~~~~~~~~l~~ll~~~~~~~~~pd~vI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~~~~~~~~~~~ 154 (480)
T 2vch_A 76 L-SSSTRIESRISLTVTRSNPELRKVFDSFVEGGRLPTALVVDLFGTDAFDVAVEFHVPPYIFYPTTANVLSFFLHLPKL 154 (480)
T ss_dssp S-CTTCCHHHHHHHHHHTTHHHHHHHHHHHHHTTCCCSEEEECTTCGGGHHHHHHTTCCEEEEECSCHHHHHHHHHHHHH
T ss_pred C-CCchhHHHHHHHHHHhhhHHHHHHHHHhccCCCCCeEEEECCcchhHHHHHHHcCCCEEEEECccHHHHHHHHHHHHH
Confidence 1 1112333333333344566777777652 2378 9999999999999999999999999999998766655544433
Q ss_pred hhcCCCCCCCCCCCCCceecCCCCCCCCCCCCCccccCCCCCChHHHHHHHhhhcccCCceEEEcChhhhchHHHHHhhh
Q 011792 155 AEEGELPVTDENFDKPVTCIPELENIFRNRDLPSICRHGGPDDPILQTFIRDTSATTRTSALVINTFNEIEGPIISKLGS 234 (477)
Q Consensus 155 ~~~~~~p~~~~~~~~~~~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ns~~~le~p~l~~~~~ 234 (477)
......+... . ......+++.. +...+++..+.. +.......+........+++.+++|++.+||++.+....+
T Consensus 155 ~~~~~~~~~~--~-~~~~~~Pg~~p-~~~~~l~~~~~~--~~~~~~~~~~~~~~~~~~~~g~~~nt~~ele~~~~~~l~~ 228 (480)
T 2vch_A 155 DETVSCEFRE--L-TEPLMLPGCVP-VAGKDFLDPAQD--RKDDAYKWLLHNTKRYKEAEGILVNTFFELEPNAIKALQE 228 (480)
T ss_dssp HHHCCSCGGG--C-SSCBCCTTCCC-BCGGGSCGGGSC--TTSHHHHHHHHHHHHGGGCSEEEESCCTTTSHHHHHHHHS
T ss_pred HhcCCCcccc--c-CCcccCCCCCC-CChHHCchhhhc--CCchHHHHHHHHHHhcccCCEEEEcCHHHHhHHHHHHHHh
Confidence 2222111110 0 00112344433 444444443321 1123344444445555677889999999999988776653
Q ss_pred ---cCCceeEeCccccccccccccccccCCCCccCcccCccccccccccccCCCCCcEEEEEecCcccCCHHHHHHHHHH
Q 011792 235 ---RLTKIYTVGPLHALLKSRIQEDSVESSPLESNNCVLSKEDRSCMTWLGSQPSRSVLYVSFGSFIKLSGDQILEFWHG 311 (477)
Q Consensus 235 ---~~p~~~~vG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~a 311 (477)
.+|++++|||++..... ...+..++++.+|++.++++++|||||||+...+.+.+..++.+
T Consensus 229 ~~~~~~~v~~vGpl~~~~~~----------------~~~~~~~~~~~~wLd~~~~~~vvyvs~GS~~~~~~~~~~~~~~a 292 (480)
T 2vch_A 229 PGLDKPPVYPVGPLVNIGKQ----------------EAKQTEESECLKWLDNQPLGSVLYVSFGSGGTLTCEQLNELALG 292 (480)
T ss_dssp CCTTCCCEEECCCCCCCSCS----------------CC-----CHHHHHHHTSCTTCEEEEECTTTCCCCHHHHHHHHHH
T ss_pred cccCCCcEEEEecccccccc----------------ccCccchhHHHHHhcCCCCCceEEEecccccCCCHHHHHHHHHH
Confidence 24799999999864321 00013456688999987788999999999998888999999999
Q ss_pred HHhCCCcEEEEEecCCcCCC----------CCCCCCchhhHhhhcCCCceee-ccCHHHHHhcccccccccccCchhHHH
Q 011792 312 IVNSGKGFLWVIRSDLIDGE----------SGVGPVPAELDQGTKERGCIVS-WAPQEEVLAHQAIGGFLTHSGWNSTLE 380 (477)
Q Consensus 312 ~~~~~~~~i~~~~~~~~~~~----------~~~~~~~~~~~~~~~~nv~~~~-~~p~~~ll~~~~~~~~I~HGG~gs~~e 380 (477)
++..+.+|||+++.....+. .....+|+++.++..+..+++. |+||.+||+|+++++||||||+||++|
T Consensus 293 l~~~~~~~lw~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~g~~v~~w~Pq~~vL~h~~v~~fvtHgG~~S~~E 372 (480)
T 2vch_A 293 LADSEQRFLWVIRSPSGIANSSYFDSHSQTDPLTFLPPGFLERTKKRGFVIPFWAPQAQVLAHPSTGGFLTHCGWNSTLE 372 (480)
T ss_dssp HHHTTCEEEEEECCCCSSTTTTTTCC--CSCGGGGSCTTHHHHTTTTEEEEESCCCHHHHHHSTTEEEEEECCCHHHHHH
T ss_pred HHhcCCcEEEEECCccccccccccccccccchhhhcCHHHHHHhCCCeEEEeCccCHHHHhCCCCcCeEEecccchhHHH
Confidence 99999999999975421100 0001345555555444446665 999999999999999999999999999
Q ss_pred HhhcCCceecCCccchhhhhHHHHhhhhceeeecc-C---CCCHHHHHHHHHHHHh-HhHHHHHHHHHHHHHHHHHHHHc
Q 011792 381 SMVAGVPMICWPQVGDQQVNSRCVSEIWKIGFDMK-D---TCDRSTIEKLVRDLMD-NKRDKIMESTVQIAKMARDAVKE 455 (477)
Q Consensus 381 al~~GvP~l~~P~~~DQ~~na~rv~~~~G~G~~l~-~---~~~~~~l~~~v~~ll~-~~~~~~~~~a~~l~~~~~~~~~~ 455 (477)
|+++|||||++|++.||+.||+++++++|+|+.++ . .+++++|.++|+++|+ +++++|++||+++++++++++++
T Consensus 373 al~~GvP~i~~P~~~DQ~~na~~l~~~~G~g~~l~~~~~~~~~~~~l~~av~~vl~~~~~~~~r~~a~~l~~~~~~a~~~ 452 (480)
T 2vch_A 373 SVVSGIPLIAWPLYAEQKMNAVLLSEDIRAALRPRAGDDGLVRREEVARVVKGLMEGEEGKGVRNKMKELKEAACRVLKD 452 (480)
T ss_dssp HHHHTCCEEECCCSTTHHHHHHHHHHTTCCEECCCCCTTSCCCHHHHHHHHHHHHTSTHHHHHHHHHHHHHHHHHHHTST
T ss_pred HHHcCCCEEeccccccchHHHHHHHHHhCeEEEeecccCCccCHHHHHHHHHHHhcCcchHHHHHHHHHHHHHHHHHHhc
Confidence 99999999999999999999999755689999997 3 6999999999999998 11289999999999999998899
Q ss_pred CCChHHHHHHHHHHHHH
Q 011792 456 GGSSYRNLEKLIEDIRL 472 (477)
Q Consensus 456 gg~~~~~~~~~i~~~~~ 472 (477)
||++..++++||+++..
T Consensus 453 gGss~~~~~~~v~~~~~ 469 (480)
T 2vch_A 453 DGTSTKALSLVALKWKA 469 (480)
T ss_dssp TSHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHH
Confidence 99999999999999865
No 5
>2acv_A Triterpene UDP-glucosyl transferase UGT71G1; glycosyltransferase; HET: UDP; 2.00A {Medicago truncatula} SCOP: c.87.1.10 PDB: 2acw_A*
Probab=100.00 E-value=1.2e-57 Score=459.41 Aligned_cols=434 Identities=28% Similarity=0.443 Sum_probs=321.1
Q ss_pred CCEEEEEcCCCCCCHHHHHHHHHHHHhC--CCeEEEEeCCccchh-ccCCCcccccccCCCCeEEEeCCCCC-CCCCCCC
Q 011792 6 VPHVVLLPFPAYGHIKPMLSLAKLFSHA--GFRITFVNTDQYHDR-LFGNTDVTAFYKHFPNFLCTSIPDGL-PPDNPRF 81 (477)
Q Consensus 6 ~~~il~~~~~~~GHv~p~l~La~~L~~r--GH~Vt~~~~~~~~~~-l~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~ 81 (477)
++||+++|+|++||++|+++||+.|++| ||+|||++++.+.+. +.+... ......+.+.|..+|++. +... .
T Consensus 9 ~~~vv~~p~p~~GHi~P~l~La~~L~~r~pG~~Vt~v~t~~~~~~~~~~~~~--~~~~~~~~i~~~~lp~~~~~~~~--~ 84 (463)
T 2acv_A 9 NSELIFIPAPGIGHLASALEFAKLLTNHDKNLYITVFCIKFPGMPFADSYIK--SVLASQPQIQLIDLPEVEPPPQE--L 84 (463)
T ss_dssp CEEEEEECCSSTTTHHHHHHHHHHHHHTCTTEEEEEEECCCTTCCCCHHHHH--HHHCSCTTEEEEECCCCCCCCGG--G
T ss_pred CCEEEEEcCcccchHHHHHHHHHHHHhcCCCcEEEEEEcCCcchhhhhhhhh--hcccCCCCceEEECCCCCCCccc--c
Confidence 5899999999999999999999999999 999999999765321 110000 000112359999999752 3211 0
Q ss_pred CCChHHHHHhhchhcHHHHHHHHhc-CCCCCeEEEECCCcchHHHHHHHcCCCeEEEccCchhhHHHHhhhhhhhhcCCC
Q 011792 82 GIYTKDWFCSNKPVSKLAFRQLLMT-PGRLPTCIISDSIMSFAIDVAEELNIPIITFRPYSAYCSWSDFHFSKLAEEGEL 160 (477)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~l~~~l~~-~~~~~D~vI~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (477)
.......+......+.+.+++++++ .+.+||+||+|.++.|+..+|+++|||++.+++++++.+..+.+++..... .
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~d~vI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~--~ 162 (463)
T 2acv_A 85 LKSPEFYILTFLESLIPHVKATIKTILSNKVVGLVLDFFCVSMIDVGNEFGIPSYLFLTSNVGFLSLMLSLKNRQIE--E 162 (463)
T ss_dssp GGSHHHHHHHHHHHTHHHHHHHHHHHCCTTEEEEEEEGGGGGGHHHHHHTTCCEEEEESSCHHHHHHHHHGGGSCTT--C
T ss_pred cCCccHHHHHHHHhhhHHHHHHHHhccCCCCeEEEECCcchhHHHHHHHcCCCEEEEeCchHHHHHHHHHHHhhccc--C
Confidence 1111111333334566778888876 233899999999999999999999999999999988776655544432100 0
Q ss_pred CCCCCCCCCCceecCCC-CCCCCCCCCCccccCCCCCChHHHHHHHhhhcccCCceEEEcChhhhchHHHHHhhhc---C
Q 011792 161 PVTDENFDKPVTCIPEL-ENIFRNRDLPSICRHGGPDDPILQTFIRDTSATTRTSALVINTFNEIEGPIISKLGSR---L 236 (477)
Q Consensus 161 p~~~~~~~~~~~~~~~l-~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ns~~~le~p~l~~~~~~---~ 236 (477)
+............++++ .. +...+++..+... ......+.........++.+++||+++||++.++...+. .
T Consensus 163 ~~~~~~~~~~~~~~pg~~~~-~~~~~l~~~~~~~---~~~~~~~~~~~~~~~~~~~~l~nt~~ele~~~~~~l~~~~~p~ 238 (463)
T 2acv_A 163 VFDDSDRDHQLLNIPGISNQ-VPSNVLPDACFNK---DGGYIAYYKLAERFRDTKGIIVNTFSDLEQSSIDALYDHDEKI 238 (463)
T ss_dssp CCCCSSGGGCEECCTTCSSC-EEGGGSCHHHHCT---TTHHHHHHHHHHHHTTSSEEEESCCHHHHHHHHHHHHHHCTTS
T ss_pred CCCCccccCceeECCCCCCC-CChHHCchhhcCC---chHHHHHHHHHHhcccCCEEEECCHHHHhHHHHHHHHhccccC
Confidence 10000000002234555 33 4444554433321 224444455555567788899999999999887766552 5
Q ss_pred CceeEeCccccccccccccccccCCCCccCcccCccccccccccccCCCCCcEEEEEecCcc-cCCHHHHHHHHHHHHhC
Q 011792 237 TKIYTVGPLHALLKSRIQEDSVESSPLESNNCVLSKEDRSCMTWLGSQPSRSVLYVSFGSFI-KLSGDQILEFWHGIVNS 315 (477)
Q Consensus 237 p~~~~vG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~Gs~~-~~~~~~~~~~~~a~~~~ 315 (477)
|++++|||++....+. ... . .|..++++.+|++.++++++|||||||+. ..+.+.+..++.+++..
T Consensus 239 ~~v~~vGpl~~~~~~~-------~~~-----~-~~~~~~~~~~wl~~~~~~~vv~vs~GS~~~~~~~~~~~~~~~~l~~~ 305 (463)
T 2acv_A 239 PPIYAVGPLLDLKGQP-------NPK-----L-DQAQHDLILKWLDEQPDKSVVFLCFGSMGVSFGPSQIREIALGLKHS 305 (463)
T ss_dssp CCEEECCCCCCSSCCC-------BTT-----B-CHHHHHHHHHHHHTSCTTCEEEEECCSSCCCCCHHHHHHHHHHHHHH
T ss_pred CcEEEeCCCccccccc-------ccc-----c-ccccchhHHHHHhcCCCCceEEEEeccccccCCHHHHHHHHHHHHhC
Confidence 7999999998643100 000 0 02344678899998878899999999999 78888899999999999
Q ss_pred CCcEEEEEecCCcCCCCCCCCCchhhHhhh--cCCCceeeccCHHHHHhcccccccccccCchhHHHHhhcCCceecCCc
Q 011792 316 GKGFLWVIRSDLIDGESGVGPVPAELDQGT--KERGCIVSWAPQEEVLAHQAIGGFLTHSGWNSTLESMVAGVPMICWPQ 393 (477)
Q Consensus 316 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~--~~nv~~~~~~p~~~ll~~~~~~~~I~HGG~gs~~eal~~GvP~l~~P~ 393 (477)
+.+|||+++.+ ...++.++.++. ++|+++++|+||.++|+|+++++||||||+||++|++++|||||++|+
T Consensus 306 ~~~~l~~~~~~-------~~~l~~~~~~~~~~~~~~~v~~w~pq~~vL~h~~~~~fvth~G~~s~~Eal~~GvP~i~~P~ 378 (463)
T 2acv_A 306 GVRFLWSNSAE-------KKVFPEGFLEWMELEGKGMICGWAPQVEVLAHKAIGGFVSHCGWNSILESMWFGVPILTWPI 378 (463)
T ss_dssp TCEEEEECCCC-------GGGSCTTHHHHHHHHCSEEEESSCCHHHHHHSTTEEEEEECCCHHHHHHHHHTTCCEEECCC
T ss_pred CCcEEEEECCC-------cccCChhHHHhhccCCCEEEEccCCHHHHhCCCccCeEEecCCchhHHHHHHcCCCeeeccc
Confidence 99999999542 013566676666 789999999999999999999999999999999999999999999999
Q ss_pred cchhhhhHHHHhhhhceeeec-c----C--CCCHHHHHHHHHHHHh-HhHHHHHHHHHHHHHHHHHHHHcCCChHHHHHH
Q 011792 394 VGDQQVNSRCVSEIWKIGFDM-K----D--TCDRSTIEKLVRDLMD-NKRDKIMESTVQIAKMARDAVKEGGSSYRNLEK 465 (477)
Q Consensus 394 ~~DQ~~na~rv~~~~G~G~~l-~----~--~~~~~~l~~~v~~ll~-~~~~~~~~~a~~l~~~~~~~~~~gg~~~~~~~~ 465 (477)
+.||+.||+++++++|+|+.+ + + .+++++|.++|+++|+ + ++|++||+++++.+++++++||++.+++++
T Consensus 379 ~~dQ~~Na~~lv~~~g~g~~l~~~~~~~~~~~~~~~l~~ai~~ll~~~--~~~r~~a~~l~~~~~~a~~~gGss~~~l~~ 456 (463)
T 2acv_A 379 YAEQQLNAFRLVKEWGVGLGLRVDYRKGSDVVAAEEIEKGLKDLMDKD--SIVHKKVQEMKEMSRNAVVDGGSSLISVGK 456 (463)
T ss_dssp STTHHHHHHHHHHTSCCEEESCSSCCTTCCCCCHHHHHHHHHHHTCTT--CTHHHHHHHHHHHHHHHTSTTSHHHHHHHH
T ss_pred hhhhHHHHHHHHHHcCeEEEEecccCCCCccccHHHHHHHHHHHHhcc--HHHHHHHHHHHHHHHHHHhcCCcHHHHHHH
Confidence 999999999964568999999 2 3 6899999999999997 4 789999999999999999999999999999
Q ss_pred HHHHHH
Q 011792 466 LIEDIR 471 (477)
Q Consensus 466 ~i~~~~ 471 (477)
||+++.
T Consensus 457 ~v~~~~ 462 (463)
T 2acv_A 457 LIDDIT 462 (463)
T ss_dssp HHHHHH
T ss_pred HHHHhc
Confidence 999874
No 6
>2iya_A OLEI, oleandomycin glycosyltransferase; carbohydrate, glycosylation, enzyme, macrolide; HET: UDP ZIO; 1.7A {Streptomyces antibioticus}
Probab=100.00 E-value=2.6e-44 Score=360.38 Aligned_cols=397 Identities=17% Similarity=0.208 Sum_probs=267.8
Q ss_pred CCEEEEEcCCCCCCHHHHHHHHHHHHhCCCeEEEEeCCccchhccCCCcccccccCCCCeEEEeCCCCCCCCCCC---CC
Q 011792 6 VPHVVLLPFPAYGHIKPMLSLAKLFSHAGFRITFVNTDQYHDRLFGNTDVTAFYKHFPNFLCTSIPDGLPPDNPR---FG 82 (477)
Q Consensus 6 ~~~il~~~~~~~GHv~p~l~La~~L~~rGH~Vt~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~---~~ 82 (477)
++||++++.+++||++|+++||++|+++||+|+|++++.+.+.+.+ .+ ++|..++..++..... ..
T Consensus 12 ~~~Il~~~~~~~GHv~p~l~la~~L~~~Gh~V~~~~~~~~~~~~~~-~g----------~~~~~~~~~~~~~~~~~~~~~ 80 (424)
T 2iya_A 12 PRHISFFNIPGHGHVNPSLGIVQELVARGHRVSYAITDEFAAQVKA-AG----------ATPVVYDSILPKESNPEESWP 80 (424)
T ss_dssp CCEEEEECCSCHHHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHHH-HT----------CEEEECCCCSCCTTCTTCCCC
T ss_pred cceEEEEeCCCCcccchHHHHHHHHHHCCCeEEEEeCHHHHHHHHh-CC----------CEEEecCccccccccchhhcc
Confidence 4799999999999999999999999999999999999877665544 23 7778887654432111 11
Q ss_pred CChHHHHHhhch---hcHHHHHHHHhcCCCCCeEEEECCCcchHHHHHHHcCCCeEEEccCchhhHHHHhhhhhhhhcCC
Q 011792 83 IYTKDWFCSNKP---VSKLAFRQLLMTPGRLPTCIISDSIMSFAIDVAEELNIPIITFRPYSAYCSWSDFHFSKLAEEGE 159 (477)
Q Consensus 83 ~~~~~~~~~~~~---~~~~~l~~~l~~~~~~~D~vI~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~~ 159 (477)
.+....+..+.. .....+.+++++. +||+||+|.+..++..+|+.+|||++.+++.+...... ..........+
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~l~~~l~~~--~pD~VI~d~~~~~~~~~A~~lgIP~v~~~~~~~~~~~~-~~~~~~~~~~~ 157 (424)
T 2iya_A 81 EDQESAMGLFLDEAVRVLPQLEDAYADD--RPDLIVYDIASWPAPVLGRKWDIPFVQLSPTFVAYEGF-EEDVPAVQDPT 157 (424)
T ss_dssp SSHHHHHHHHHHHHHHHHHHHHHHTTTS--CCSEEEEETTCTHHHHHHHHHTCCEEEEESSCCCCTTH-HHHSGGGSCCC
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHhcc--CCCEEEEcCcccHHHHHHHhcCCCEEEEeccccccccc-ccccccccccc
Confidence 122333322222 2344555666544 89999999988899999999999999998776421111 00000000000
Q ss_pred CCCCCCCCCCCceecCCCCCCCCCCCCCccccCCCCCChHHHHHHHhh-------hcccCCceEEEcChhhhchHHHHHh
Q 011792 160 LPVTDENFDKPVTCIPELENIFRNRDLPSICRHGGPDDPILQTFIRDT-------SATTRTSALVINTFNEIEGPIISKL 232 (477)
Q Consensus 160 ~p~~~~~~~~~~~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~l~ns~~~le~p~l~~~ 232 (477)
........ .......... +. ...+. .. ............. .....++.++++++++++++.
T Consensus 158 ~~~~~~~~--~~~~~~~~~~-~~-~~~~~-~~---~~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~l~~~~---- 225 (424)
T 2iya_A 158 ADRGEEAA--APAGTGDAEE-GA-EAEDG-LV---RFFTRLSAFLEEHGVDTPATEFLIAPNRCIVALPRTFQIKG---- 225 (424)
T ss_dssp C-------------------------HHH-HH---HHHHHHHHHHHHTTCCSCHHHHHHCCSSEEESSCTTTSTTG----
T ss_pred cccccccc--cccccccchh-hh-ccchh-HH---HHHHHHHHHHHHcCCCCCHHHhccCCCcEEEEcchhhCCCc----
Confidence 00000000 0000000000 00 00000 00 0000001111110 001256789999999998762
Q ss_pred hhcCCceeEeCccccccccccccccccCCCCccCcccCccccccccccccCCCCCcEEEEEecCcccCCHHHHHHHHHHH
Q 011792 233 GSRLTKIYTVGPLHALLKSRIQEDSVESSPLESNNCVLSKEDRSCMTWLGSQPSRSVLYVSFGSFIKLSGDQILEFWHGI 312 (477)
Q Consensus 233 ~~~~p~~~~vG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~a~ 312 (477)
....+++++|||+...... ..+|++..+++++|||++||......+.+..+++++
T Consensus 226 ~~~~~~~~~vGp~~~~~~~-------------------------~~~~~~~~~~~~~v~v~~Gs~~~~~~~~~~~~~~al 280 (424)
T 2iya_A 226 DTVGDNYTFVGPTYGDRSH-------------------------QGTWEGPGDGRPVLLIALGSAFTDHLDFYRTCLSAV 280 (424)
T ss_dssp GGCCTTEEECCCCCCCCGG-------------------------GCCCCCCCSSCCEEEEECCSSSCCCHHHHHHHHHHH
T ss_pred cCCCCCEEEeCCCCCCccc-------------------------CCCCCccCCCCCEEEEEcCCCCcchHHHHHHHHHHH
Confidence 3455789999997632110 124776556778999999999866678899999999
Q ss_pred HhCCCcEEEEEecCCcCCCCCCCCCchhhHhhhcCCCceeeccCHHHHHhcccccccccccCchhHHHHhhcCCceecCC
Q 011792 313 VNSGKGFLWVIRSDLIDGESGVGPVPAELDQGTKERGCIVSWAPQEEVLAHQAIGGFLTHSGWNSTLESMVAGVPMICWP 392 (477)
Q Consensus 313 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~~p~~~ll~~~~~~~~I~HGG~gs~~eal~~GvP~l~~P 392 (477)
+..+.+++|.++... ....+ +..++|+++.+|+||.++|+++++ ||||||+||++||+++|||+|++|
T Consensus 281 ~~~~~~~~~~~g~~~---------~~~~~-~~~~~~v~~~~~~~~~~~l~~~d~--~v~~~G~~t~~Ea~~~G~P~i~~p 348 (424)
T 2iya_A 281 DGLDWHVVLSVGRFV---------DPADL-GEVPPNVEVHQWVPQLDILTKASA--FITHAGMGSTMEALSNAVPMVAVP 348 (424)
T ss_dssp TTCSSEEEEECCTTS---------CGGGG-CSCCTTEEEESSCCHHHHHTTCSE--EEECCCHHHHHHHHHTTCCEEECC
T ss_pred hcCCcEEEEEECCcC---------ChHHh-ccCCCCeEEecCCCHHHHHhhCCE--EEECCchhHHHHHHHcCCCEEEec
Confidence 888889989885321 11111 125689999999999999999987 999999999999999999999999
Q ss_pred ccchhhhhHHHHhhhhceeeecc-CCCCHHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHH
Q 011792 393 QVGDQQVNSRCVSEIWKIGFDMK-DTCDRSTIEKLVRDLMDNKRDKIMESTVQIAKMARDAVKEGGSSYRNLEKLIEDIR 471 (477)
Q Consensus 393 ~~~DQ~~na~rv~~~~G~G~~l~-~~~~~~~l~~~v~~ll~~~~~~~~~~a~~l~~~~~~~~~~gg~~~~~~~~~i~~~~ 471 (477)
...||+.||.++++ +|+|+.++ +.+++++|.++|+++|+| ++|+++++++++.+++. +| ...+.+.|+++.
T Consensus 349 ~~~dQ~~na~~l~~-~g~g~~~~~~~~~~~~l~~~i~~ll~~--~~~~~~~~~~~~~~~~~---~~--~~~~~~~i~~~~ 420 (424)
T 2iya_A 349 QIAEQTMNAERIVE-LGLGRHIPRDQVTAEKLREAVLAVASD--PGVAERLAAVRQEIREA---GG--ARAAADILEGIL 420 (424)
T ss_dssp CSHHHHHHHHHHHH-TTSEEECCGGGCCHHHHHHHHHHHHHC--HHHHHHHHHHHHHHHTS---CH--HHHHHHHHHHHH
T ss_pred CccchHHHHHHHHH-CCCEEEcCcCCCCHHHHHHHHHHHHcC--HHHHHHHHHHHHHHHhc---Cc--HHHHHHHHHHHH
Confidence 99999999999965 89999998 578999999999999998 89999999999999864 44 455677777776
Q ss_pred Hh
Q 011792 472 LM 473 (477)
Q Consensus 472 ~~ 473 (477)
..
T Consensus 421 ~~ 422 (424)
T 2iya_A 421 AE 422 (424)
T ss_dssp HH
T ss_pred hc
Confidence 43
No 7
>4amg_A Snogd; transferase, polyketide biosynthesis, GT1 family, nogalamyci; HET: MLY; 2.59A {Streptomyces nogalater} PDB: 4an4_A* 4amb_A*
Probab=100.00 E-value=3.3e-43 Score=349.64 Aligned_cols=354 Identities=15% Similarity=0.209 Sum_probs=229.3
Q ss_pred CCEEEEEcCCCCCCHHHHHHHHHHHHhCCCeEEEEeCCccchhccCCCcccccccCCCCeEEEeCCCCCCC------C--
Q 011792 6 VPHVVLLPFPAYGHIKPMLSLAKLFSHAGFRITFVNTDQYHDRLFGNTDVTAFYKHFPNFLCTSIPDGLPP------D-- 77 (477)
Q Consensus 6 ~~~il~~~~~~~GHv~p~l~La~~L~~rGH~Vt~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~------~-- 77 (477)
.|||+|+++|++||++|+++||++|++|||+|||++++.+.+. .+.+ +.+..+...... .
T Consensus 22 ~MRIL~~~~p~~GHv~P~l~LA~~L~~rGh~Vt~~t~~~~~~~-~~~g-----------~~~~~~~~~~~~~~~~~~~~~ 89 (400)
T 4amg_A 22 SMRALFITSPGLSHILPTVPLAQALRALGHEVRYATGGDIRAV-AEAG-----------LCAVDVSPGVNYAKLFVPDDT 89 (400)
T ss_dssp CCEEEEECCSSHHHHGGGHHHHHHHHHTTCEEEEEECSSTHHH-HTTT-----------CEEEESSTTCCSHHHHSCCC-
T ss_pred CCeEEEECCCchhHHHHHHHHHHHHHHCCCEEEEEeCcchhhH-HhcC-----------CeeEecCCchhHhhhcccccc
Confidence 5999999999999999999999999999999999999766543 3322 444444322111 0
Q ss_pred ---C-CCCCCChHHH----HHhhchhcHHHHHHHHhcCCCCCeEEEECCCcchHHHHHHHcCCCeEEEccCchhhHHHHh
Q 011792 78 ---N-PRFGIYTKDW----FCSNKPVSKLAFRQLLMTPGRLPTCIISDSIMSFAIDVAEELNIPIITFRPYSAYCSWSDF 149 (477)
Q Consensus 78 ---~-~~~~~~~~~~----~~~~~~~~~~~l~~~l~~~~~~~D~vI~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~ 149 (477)
. .......... +..........+.+++++. +||+||+|.+.+++..+|+.+|||++.+...+........
T Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~--~pD~Vv~d~~~~~~~~~A~~~gip~~~~~~~~~~~~~~~~ 167 (400)
T 4amg_A 90 DVTDPMHSEGLGEGFFAEMFARVSAVAVDGALRTARSW--RPDLVVHTPTQGAGPLTAAALQLPCVELPLGPADSEPGLG 167 (400)
T ss_dssp -----------CHHHHHHHHHHHHHHHHHHHHHHHHHH--CCSEEEECTTCTHHHHHHHHTTCCEEECCSSTTTCCHHHH
T ss_pred ccccccchhhhhHHHHHHHHHHHHHHHHHHHHHHHHhc--CCCEEEECcchHHHHHHHHHcCCCceeecccccccccchh
Confidence 0 0000011111 1112222333445555555 8999999999999999999999999987665543322111
Q ss_pred hhhhhhhcCCCCCCCCCCCCCceecCCCCCCCCCCCCCccccCCCCCChHHHHHHHhh-hcccCCceEEEcChhhhchHH
Q 011792 150 HFSKLAEEGELPVTDENFDKPVTCIPELENIFRNRDLPSICRHGGPDDPILQTFIRDT-SATTRTSALVINTFNEIEGPI 228 (477)
Q Consensus 150 ~~~~~~~~~~~p~~~~~~~~~~~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~ns~~~le~p~ 228 (477)
.... .. + ........ ......+..+....+.
T Consensus 168 ~~~~---~~---------------l-------------------------~~~~~~~~~~~~~~~~~~~~~~~~~----- 199 (400)
T 4amg_A 168 ALIR---RA---------------M-------------------------SKDYERHGVTGEPTGSVRLTTTPPS----- 199 (400)
T ss_dssp HHHH---HH---------------T-------------------------HHHHHHTTCCCCCSCEEEEECCCHH-----
T ss_pred hHHH---HH---------------H-------------------------HHHHHHhCCCcccccchhhcccCch-----
Confidence 0000 00 0 00000000 0001111222222111
Q ss_pred HHHhhh---cCCceeEeCccccccccccccccccCCCCccCcccCccccccccccccCCCCCcEEEEEecCcccCC--HH
Q 011792 229 ISKLGS---RLTKIYTVGPLHALLKSRIQEDSVESSPLESNNCVLSKEDRSCMTWLGSQPSRSVLYVSFGSFIKLS--GD 303 (477)
Q Consensus 229 l~~~~~---~~p~~~~vG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~Gs~~~~~--~~ 303 (477)
.....+ ..+....+.+.... ....+.+|++..+++++|||||||+.... ..
T Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~------------------------~~~~~~~~l~~~~~~~~v~vs~Gs~~~~~~~~~ 255 (400)
T 4amg_A 200 VEALLPEDRRSPGAWPMRYVPYN------------------------GGAVLPDWLPPAAGRRRIAVTLGSIDALSGGIA 255 (400)
T ss_dssp HHHTSCGGGCCTTCEECCCCCCC------------------------CCEECCTTCSCCTTCCEEEECCCSCC--CCSSS
T ss_pred hhccCcccccCCcccCccccccc------------------------ccccCcccccccCCCcEEEEeCCcccccCccHH
Confidence 110011 11222222222111 11223358887888999999999987533 35
Q ss_pred HHHHHHHHHHhCCCcEEEEEecCCcCCCCCCCCCchhhHhhhcCCCceeeccCHHHHHhcccccccccccCchhHHHHhh
Q 011792 304 QILEFWHGIVNSGKGFLWVIRSDLIDGESGVGPVPAELDQGTKERGCIVSWAPQEEVLAHQAIGGFLTHSGWNSTLESMV 383 (477)
Q Consensus 304 ~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~~p~~~ll~~~~~~~~I~HGG~gs~~eal~ 383 (477)
.+..++++++..+.++||..++.... ... ..|+|+++.+|+||.++|+++++ ||||||+||++||++
T Consensus 256 ~~~~~~~~l~~~~~~~v~~~~~~~~~------~~~-----~~~~~v~~~~~~p~~~lL~~~~~--~v~h~G~~s~~Eal~ 322 (400)
T 4amg_A 256 KLAPLFSEVADVDAEFVLTLGGGDLA------LLG-----ELPANVRVVEWIPLGALLETCDA--IIHHGGSGTLLTALA 322 (400)
T ss_dssp TTHHHHHHGGGSSSEEEEECCTTCCC------CCC-----CCCTTEEEECCCCHHHHHTTCSE--EEECCCHHHHHHHHH
T ss_pred HHHHHHHHhhccCceEEEEecCcccc------ccc-----cCCCCEEEEeecCHHHHhhhhhh--eeccCCccHHHHHHH
Confidence 67889999999999999998653211 111 25689999999999999999887 999999999999999
Q ss_pred cCCceecCCccchhhhhHHHHhhhhceeeecc-CCCCHHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHHHHHcCCChHHH
Q 011792 384 AGVPMICWPQVGDQQVNSRCVSEIWKIGFDMK-DTCDRSTIEKLVRDLMDNKRDKIMESTVQIAKMARDAVKEGGSSYRN 462 (477)
Q Consensus 384 ~GvP~l~~P~~~DQ~~na~rv~~~~G~G~~l~-~~~~~~~l~~~v~~ll~~~~~~~~~~a~~l~~~~~~~~~~gg~~~~~ 462 (477)
+|||+|++|++.||+.||.++++ +|+|+.++ .+.++ ++|+++|+| ++|++||+++++++++. +| ...
T Consensus 323 ~GvP~v~~P~~~dQ~~na~~v~~-~G~g~~l~~~~~~~----~al~~lL~d--~~~r~~a~~l~~~~~~~---~~--~~~ 390 (400)
T 4amg_A 323 AGVPQCVIPHGSYQDTNRDVLTG-LGIGFDAEAGSLGA----EQCRRLLDD--AGLREAALRVRQEMSEM---PP--PAE 390 (400)
T ss_dssp HTCCEEECCC---CHHHHHHHHH-HTSEEECCTTTCSH----HHHHHHHHC--HHHHHHHHHHHHHHHTS---CC--HHH
T ss_pred hCCCEEEecCcccHHHHHHHHHH-CCCEEEcCCCCchH----HHHHHHHcC--HHHHHHHHHHHHHHHcC---CC--HHH
Confidence 99999999999999999999965 89999998 45554 567789999 99999999999999875 54 456
Q ss_pred HHHHHHHH
Q 011792 463 LEKLIEDI 470 (477)
Q Consensus 463 ~~~~i~~~ 470 (477)
+.+.||++
T Consensus 391 ~a~~le~l 398 (400)
T 4amg_A 391 TAAXLVAL 398 (400)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHh
Confidence 67788876
No 8
>1iir_A Glycosyltransferase GTFB; rossmann fold; 1.80A {Amycolatopsis orientalis} SCOP: c.87.1.5
Probab=100.00 E-value=7e-43 Score=348.82 Aligned_cols=384 Identities=13% Similarity=0.109 Sum_probs=252.7
Q ss_pred CEEEEEcCCCCCCHHHHHHHHHHHHhCCCeEEEEeCCccchhccCCCcccccccCCCCeEEEeCCCCCCCCCCCCCCChH
Q 011792 7 PHVVLLPFPAYGHIKPMLSLAKLFSHAGFRITFVNTDQYHDRLFGNTDVTAFYKHFPNFLCTSIPDGLPPDNPRFGIYTK 86 (477)
Q Consensus 7 ~~il~~~~~~~GHv~p~l~La~~L~~rGH~Vt~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 86 (477)
|||+|++.++.||++|+++||++|++|||+|+|++++.+.+.+.+ .+ ++|..++...............
T Consensus 1 M~Il~~~~~~~GHv~P~l~la~~L~~~Gh~V~~~~~~~~~~~v~~-~g----------~~~~~i~~~~~~~~~~~~~~~~ 69 (415)
T 1iir_A 1 MRVLLATCGSRGDTEPLVALAVRVRDLGADVRMCAPPDCAERLAE-VG----------VPHVPVGPSARAPIQRAKPLTA 69 (415)
T ss_dssp CEEEEECCSCHHHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHHH-TT----------CCEEECCC-------CCSCCCH
T ss_pred CeEEEEcCCCchhHHHHHHHHHHHHHCCCeEEEEcCHHHHHHHHH-cC----------CeeeeCCCCHHHHhhcccccch
Confidence 689999999999999999999999999999999999776554443 22 7777777543211000001111
Q ss_pred HHHHhhch-hcHHHHHHHHhcCCCCCeEEEECC-Ccch--HHHHHHHcCCCeEEEccCchhhHHHHhhhhhhhhcCCCCC
Q 011792 87 DWFCSNKP-VSKLAFRQLLMTPGRLPTCIISDS-IMSF--AIDVAEELNIPIITFRPYSAYCSWSDFHFSKLAEEGELPV 162 (477)
Q Consensus 87 ~~~~~~~~-~~~~~l~~~l~~~~~~~D~vI~D~-~~~~--~~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~~~p~ 162 (477)
..+..+.. .....++++.+. ..+||+||+|. +..+ +..+|+.+|||++.+++++..... .+.|.
T Consensus 70 ~~~~~~~~~~~~~~~~~l~~~-~~~pD~vi~d~~~~~~~~~~~~A~~lgiP~v~~~~~~~~~~~-----------~~~p~ 137 (415)
T 1iir_A 70 EDVRRFTTEAIATQFDEIPAA-AEGCAAVVTTGLLAAAIGVRSVAEKLGIPYFYAFHCPSYVPS-----------PYYPP 137 (415)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH-TTTCSEEEEESCHHHHHHHHHHHHHHTCCEEEEESSGGGSCC-----------SSSCC
T ss_pred HHHHHHHHHHHHHHHHHHHHH-hcCCCEEEECChhHhHhhHHHHHHHhCCCEEEEecCCCcCCC-----------cccCC
Confidence 12222211 112334455432 23999999998 5668 899999999999999877643211 11221
Q ss_pred CCCCCCCCceecCC-CCCCCCCCCCCccccCCCCCChHHHHHHHhh---------hcccCCceEEEcChhhhch-HHHHH
Q 011792 163 TDENFDKPVTCIPE-LENIFRNRDLPSICRHGGPDDPILQTFIRDT---------SATTRTSALVINTFNEIEG-PIISK 231 (477)
Q Consensus 163 ~~~~~~~~~~~~~~-l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~l~ns~~~le~-p~l~~ 231 (477)
.... +.+..+ ..|.+........+.. ............+ +...+. .+++|++++|++ +
T Consensus 138 ~~~~----~~~~~~~~~n~~~~~~~~~~~~~--~~~~~~~~~~~~~g~~~~~~~~~~~~~~-~~l~~~~~~l~~~~---- 206 (415)
T 1iir_A 138 PPLG----EPSTQDTIDIPAQWERNNQSAYQ--RYGGLLNSHRDAIGLPPVEDIFTFGYTD-HPWVAADPVLAPLQ---- 206 (415)
T ss_dssp CC-------------CHHHHHHHHHHHHHHH--HHHHHHHHHHHHTTCCCCCCHHHHHHCS-SCEECSCTTTSCCC----
T ss_pred ccCC----ccccchHHHHHHHHHHHHHHHHH--HhHHHHHHHHHHcCCCCCCccccccCCC-CEEEeeChhhcCCC----
Confidence 1110 000000 1110000000000000 0000000000000 001123 689999999987 4
Q ss_pred hhhcCCceeEeCccccccccccccccccCCCCccCcccCccccccccccccCCCCCcEEEEEecCcccCCHHHHHHHHHH
Q 011792 232 LGSRLTKIYTVGPLHALLKSRIQEDSVESSPLESNNCVLSKEDRSCMTWLGSQPSRSVLYVSFGSFIKLSGDQILEFWHG 311 (477)
Q Consensus 232 ~~~~~p~~~~vG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~a 311 (477)
++.+ ++++|||+...+. +..+.++.+|++. ++++|||++||.. ......+.++++
T Consensus 207 -~~~~-~~~~vG~~~~~~~--------------------~~~~~~~~~~l~~--~~~~v~v~~Gs~~-~~~~~~~~~~~a 261 (415)
T 1iir_A 207 -PTDL-DAVQTGAWILPDE--------------------RPLSPELAAFLDA--GPPPVYLGFGSLG-APADAVRVAIDA 261 (415)
T ss_dssp -CCSS-CCEECCCCCCCCC--------------------CCCCHHHHHHHHT--SSCCEEEECC----CCHHHHHHHHHH
T ss_pred -cccC-CeEeeCCCccCcc--------------------cCCCHHHHHHHhh--CCCeEEEeCCCCC-CcHHHHHHHHHH
Confidence 3444 8999999875421 1234557789974 3578999999997 678888999999
Q ss_pred HHhCCCcEEEEEecCCcCCCCCCCCCchhhHhhhcCCCceeeccCHHHHHhcccccccccccCchhHHHHhhcCCceecC
Q 011792 312 IVNSGKGFLWVIRSDLIDGESGVGPVPAELDQGTKERGCIVSWAPQEEVLAHQAIGGFLTHSGWNSTLESMVAGVPMICW 391 (477)
Q Consensus 312 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~~p~~~ll~~~~~~~~I~HGG~gs~~eal~~GvP~l~~ 391 (477)
++..+.+++|+++.... .. +..++|+++.+|+||.++|+.+++ ||||||+||++|++++|||+|++
T Consensus 262 l~~~~~~~v~~~g~~~~-------~~-----~~~~~~v~~~~~~~~~~~l~~~d~--~v~~~G~~t~~Ea~~~G~P~i~~ 327 (415)
T 1iir_A 262 IRAHGRRVILSRGWADL-------VL-----PDDGADCFAIGEVNHQVLFGRVAA--VIHHGGAGTTHVAARAGAPQILL 327 (415)
T ss_dssp HHHTTCCEEECTTCTTC-------CC-----SSCGGGEEECSSCCHHHHGGGSSE--EEECCCHHHHHHHHHHTCCEEEC
T ss_pred HHHCCCeEEEEeCCCcc-------cc-----cCCCCCEEEeCcCChHHHHhhCCE--EEeCCChhHHHHHHHcCCCEEEC
Confidence 99999999998853210 11 124578999999999999977776 99999999999999999999999
Q ss_pred CccchhhhhHHHHhhhhceeeecc-CCCCHHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHH
Q 011792 392 PQVGDQQVNSRCVSEIWKIGFDMK-DTCDRSTIEKLVRDLMDNKRDKIMESTVQIAKMARDAVKEGGSSYRNLEKLIEDI 470 (477)
Q Consensus 392 P~~~DQ~~na~rv~~~~G~G~~l~-~~~~~~~l~~~v~~ll~~~~~~~~~~a~~l~~~~~~~~~~gg~~~~~~~~~i~~~ 470 (477)
|+..||..||.+++ ++|+|+.++ +++++++|.++|.++ +| ++|+++++++++.++.. +| ...+.+.|+++
T Consensus 328 p~~~dQ~~na~~l~-~~g~g~~~~~~~~~~~~l~~~i~~l-~~--~~~~~~~~~~~~~~~~~---~~--~~~~~~~i~~~ 398 (415)
T 1iir_A 328 PQMADQPYYAGRVA-ELGVGVAHDGPIPTFDSLSAALATA-LT--PETHARATAVAGTIRTD---GA--AVAARLLLDAV 398 (415)
T ss_dssp CCSTTHHHHHHHHH-HHTSEEECSSSSCCHHHHHHHHHHH-TS--HHHHHHHHHHHHHSCSC---HH--HHHHHHHHHHH
T ss_pred CCCCccHHHHHHHH-HCCCcccCCcCCCCHHHHHHHHHHH-cC--HHHHHHHHHHHHHHhhc---Ch--HHHHHHHHHHH
Confidence 99999999999995 589999998 578999999999999 88 89999999999988642 33 45667777776
Q ss_pred HH
Q 011792 471 RL 472 (477)
Q Consensus 471 ~~ 472 (477)
..
T Consensus 399 ~~ 400 (415)
T 1iir_A 399 SR 400 (415)
T ss_dssp HT
T ss_pred Hh
Confidence 54
No 9
>1rrv_A Glycosyltransferase GTFD; GT-B, glycosyltransferase, rossmann fold, glycopeptide, VACO antibiotic, transferase-antibiotic complex; HET: OMZ GHP OMY 3FG TYD BGC; 2.00A {Amycolatopsis orientalis} SCOP: c.87.1.5
Probab=100.00 E-value=2.4e-41 Score=337.89 Aligned_cols=383 Identities=12% Similarity=0.079 Sum_probs=253.3
Q ss_pred CEEEEEcCCCCCCHHHHHHHHHHHHhCCCeEEEEeCCccchhccCCCcccccccCCCCeEEEeCCCCCCCCCCC-CCCCh
Q 011792 7 PHVVLLPFPAYGHIKPMLSLAKLFSHAGFRITFVNTDQYHDRLFGNTDVTAFYKHFPNFLCTSIPDGLPPDNPR-FGIYT 85 (477)
Q Consensus 7 ~~il~~~~~~~GHv~p~l~La~~L~~rGH~Vt~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~-~~~~~ 85 (477)
|||++++.++.||++|+++||++|+++||+|+|++++.+.+.+.+ .+ +.+..++......... .....
T Consensus 1 MrIl~~~~~~~GH~~p~l~la~~L~~~Gh~V~~~~~~~~~~~v~~-~g----------~~~~~~~~~~~~~~~~~~~~~~ 69 (416)
T 1rrv_A 1 MRVLLSVCGTRGDVEIGVALADRLKALGVQTRMCAPPAAEERLAE-VG----------VPHVPVGLPQHMMLQEGMPPPP 69 (416)
T ss_dssp CEEEEEEESCHHHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHHH-HT----------CCEEECSCCGGGCCCTTSCCCC
T ss_pred CeEEEEecCCCccHHHHHHHHHHHHHCCCeEEEEeCHHHHHHHHH-cC----------CeeeecCCCHHHHHhhccccch
Confidence 689999999999999999999999999999999999776555443 22 6777776432111000 00111
Q ss_pred HHHHHhhchhc-HHHHHHHHhcCCCCCeEEEECC-Ccch--HHHHHHHcCCCeEEEccCchhhHHHHhhhhhhhhcCCCC
Q 011792 86 KDWFCSNKPVS-KLAFRQLLMTPGRLPTCIISDS-IMSF--AIDVAEELNIPIITFRPYSAYCSWSDFHFSKLAEEGELP 161 (477)
Q Consensus 86 ~~~~~~~~~~~-~~~l~~~l~~~~~~~D~vI~D~-~~~~--~~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~~~p 161 (477)
...+..+.... ...++.+.+. ..+||+||+|. +.++ +..+|+.+|||++.+.+++.+... .+.|
T Consensus 70 ~~~~~~~~~~~~~~~~~~l~~~-~~~pD~vi~d~~~~~~~~~~~~A~~~giP~v~~~~~~~~~~~-----------~~~p 137 (416)
T 1rrv_A 70 PEEEQRLAAMTVEMQFDAVPGA-AEGCAAVVAVGDLAAATGVRSVAEKLGLPFFYSVPSPVYLAS-----------PHLP 137 (416)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH-TTTCSEEEEEECHHHHHHHHHHHHHHTCCEEEEESSGGGSCC-----------SSSC
T ss_pred hHHHHHHHHHHHHHHHHHHHHH-hcCCCEEEEcCchHHHHHHHHHHHHcCCCEEEEeCCCCCCCC-----------cccC
Confidence 11222222111 2223333321 23899999997 4557 889999999999998776543210 1111
Q ss_pred CCCCCCCCCceecCC-CCCCCCCCCCCccccCCCCCChHHHHHHHhh---------hcccCCceEEEcChhhhchHHHHH
Q 011792 162 VTDENFDKPVTCIPE-LENIFRNRDLPSICRHGGPDDPILQTFIRDT---------SATTRTSALVINTFNEIEGPIISK 231 (477)
Q Consensus 162 ~~~~~~~~~~~~~~~-l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~l~ns~~~le~p~l~~ 231 (477)
.... +.+.++ +.|.+........... . .......+.... +...+. .+++|++++|+++
T Consensus 138 -~~~~----~~~~~~r~~n~~~~~~~~~~~~~-~-~~~~~~~~~~~~g~~~~~~~~~~~~~~-~~l~~~~~~l~~~---- 205 (416)
T 1rrv_A 138 -PAYD----EPTTPGVTDIRVLWEERAARFAD-R-YGPTLNRRRAEIGLPPVEDVFGYGHGE-RPLLAADPVLAPL---- 205 (416)
T ss_dssp -CCBC----SCCCTTCCCHHHHHHHHHHHHHH-H-HHHHHHHHHHHTTCCCCSCHHHHTTCS-SCEECSCTTTSCC----
T ss_pred -CCCC----CCCCchHHHHHHHHHHHHHHHHH-H-hHHHHHHHHHHcCCCCCCchhhhccCC-CeEEccCccccCC----
Confidence 0000 000011 1110000000000000 0 000000111000 011233 7899999998875
Q ss_pred hhhcCCceeEeCccccccccccccccccCCCCccCcccCccccccccccccCCCCCcEEEEEecCccc-CCHHHHHHHHH
Q 011792 232 LGSRLTKIYTVGPLHALLKSRIQEDSVESSPLESNNCVLSKEDRSCMTWLGSQPSRSVLYVSFGSFIK-LSGDQILEFWH 310 (477)
Q Consensus 232 ~~~~~p~~~~vG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~Gs~~~-~~~~~~~~~~~ 310 (477)
++.+ ++++|||+...+. +..+.++.+|++. ++++|||++||... .....+..+++
T Consensus 206 -~~~~-~~~~vG~~~~~~~--------------------~~~~~~~~~~l~~--~~~~v~v~~Gs~~~~~~~~~~~~~~~ 261 (416)
T 1rrv_A 206 -QPDV-DAVQTGAWLLSDE--------------------RPLPPELEAFLAA--GSPPVHIGFGSSSGRGIADAAKVAVE 261 (416)
T ss_dssp -CSSC-CCEECCCCCCCCC--------------------CCCCHHHHHHHHS--SSCCEEECCTTCCSHHHHHHHHHHHH
T ss_pred -CCCC-CeeeECCCccCcc--------------------CCCCHHHHHHHhc--CCCeEEEecCCCCccChHHHHHHHHH
Confidence 3334 8999999876421 1234457789874 35789999999874 45677888999
Q ss_pred HHHhCCCcEEEEEecCCcCCCCCCCCCchhhHhhhcCCCceeeccCHHHHHhcccccccccccCchhHHHHhhcCCceec
Q 011792 311 GIVNSGKGFLWVIRSDLIDGESGVGPVPAELDQGTKERGCIVSWAPQEEVLAHQAIGGFLTHSGWNSTLESMVAGVPMIC 390 (477)
Q Consensus 311 a~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~~p~~~ll~~~~~~~~I~HGG~gs~~eal~~GvP~l~ 390 (477)
+++..+.++||+++.... .. +..++|+.+.+|+||.++|+++++ ||||||+||++||+++|||+|+
T Consensus 262 al~~~~~~~v~~~g~~~~-------~~-----~~~~~~v~~~~~~~~~~ll~~~d~--~v~~~G~~t~~Ea~~~G~P~i~ 327 (416)
T 1rrv_A 262 AIRAQGRRVILSRGWTEL-------VL-----PDDRDDCFAIDEVNFQALFRRVAA--VIHHGSAGTEHVATRAGVPQLV 327 (416)
T ss_dssp HHHHTTCCEEEECTTTTC-------CC-----SCCCTTEEEESSCCHHHHGGGSSE--EEECCCHHHHHHHHHHTCCEEE
T ss_pred HHHHCCCeEEEEeCCccc-------cc-----cCCCCCEEEeccCChHHHhccCCE--EEecCChhHHHHHHHcCCCEEE
Confidence 999999999999854310 11 124679999999999999988777 9999999999999999999999
Q ss_pred CCccchhhhhHHHHhhhhceeeecc-CCCCHHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHH-H
Q 011792 391 WPQVGDQQVNSRCVSEIWKIGFDMK-DTCDRSTIEKLVRDLMDNKRDKIMESTVQIAKMARDAVKEGGSSYRNLEKLI-E 468 (477)
Q Consensus 391 ~P~~~DQ~~na~rv~~~~G~G~~l~-~~~~~~~l~~~v~~ll~~~~~~~~~~a~~l~~~~~~~~~~gg~~~~~~~~~i-~ 468 (477)
+|+..||+.||.++++ .|+|+.++ .++++++|.++|+++ +| ++|+++++++++.+++. +| . .+.+.| +
T Consensus 328 ~p~~~dQ~~na~~l~~-~g~g~~~~~~~~~~~~l~~~i~~l-~~--~~~~~~~~~~~~~~~~~---~~--~-~~~~~i~e 397 (416)
T 1rrv_A 328 IPRNTDQPYFAGRVAA-LGIGVAHDGPTPTFESLSAALTTV-LA--PETRARAEAVAGMVLTD---GA--A-AAADLVLA 397 (416)
T ss_dssp CCCSBTHHHHHHHHHH-HTSEEECSSSCCCHHHHHHHHHHH-TS--HHHHHHHHHHTTTCCCC---HH--H-HHHHHHHH
T ss_pred ccCCCCcHHHHHHHHH-CCCccCCCCCCCCHHHHHHHHHHh-hC--HHHHHHHHHHHHHHhhc---Cc--H-HHHHHHHH
Confidence 9999999999999955 89999997 579999999999999 88 89999999999988753 33 2 445555 7
Q ss_pred HHHH
Q 011792 469 DIRL 472 (477)
Q Consensus 469 ~~~~ 472 (477)
++..
T Consensus 398 ~~~~ 401 (416)
T 1rrv_A 398 AVGR 401 (416)
T ss_dssp HHHC
T ss_pred HHhc
Confidence 6654
No 10
>3h4t_A Glycosyltransferase GTFA, glycosyltransferase; vancomycin, teicoplanin, ORF1, natural products, antibiotic; HET: UDP; 1.15A {Amycolatopsis orientalis} SCOP: c.87.1.5 PDB: 3h4i_A* 1pn3_A* 1pnv_A*
Probab=100.00 E-value=1.2e-40 Score=331.24 Aligned_cols=374 Identities=13% Similarity=0.093 Sum_probs=250.8
Q ss_pred CEEEEEcCCCCCCHHHHHHHHHHHHhCCCeEEEEeCCccchhccCCCcccccccCCCCeEEEeCCCCCCCCCC---CCCC
Q 011792 7 PHVVLLPFPAYGHIKPMLSLAKLFSHAGFRITFVNTDQYHDRLFGNTDVTAFYKHFPNFLCTSIPDGLPPDNP---RFGI 83 (477)
Q Consensus 7 ~~il~~~~~~~GHv~p~l~La~~L~~rGH~Vt~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~---~~~~ 83 (477)
|||+|++.++.||++|+++||++|+++||+|+|++++.+.+.+.. .+ ++|..++........ ....
T Consensus 1 MrIli~~~gt~Ghv~p~~~La~~L~~~Gh~V~v~~~~~~~~~v~~-~g----------~~~~~l~~~~~~~~~~~~~~~~ 69 (404)
T 3h4t_A 1 MGVLITGCGSRGDTEPLVALAARLRELGADARMCLPPDYVERCAE-VG----------VPMVPVGRAVRAGAREPGELPP 69 (404)
T ss_dssp -CEEEEEESSHHHHHHHHHHHHHHHHTTCCEEEEECGGGHHHHHH-TT----------CCEEECSSCSSGGGSCTTCCCT
T ss_pred CeEEEEeCCCCccHHHHHHHHHHHHHCCCeEEEEeCHHHHHHHHH-cC----------CceeecCCCHHHHhccccCCHH
Confidence 689999999999999999999999999999999999776666554 23 677777633221100 0111
Q ss_pred ChHHHHHhhchhcHHHHHHHHhcCCCCCeEEEECCCcchH---HHHHHHcCCCeEEEccCchhhHHHHhh-hhhhhhcCC
Q 011792 84 YTKDWFCSNKPVSKLAFRQLLMTPGRLPTCIISDSIMSFA---IDVAEELNIPIITFRPYSAYCSWSDFH-FSKLAEEGE 159 (477)
Q Consensus 84 ~~~~~~~~~~~~~~~~l~~~l~~~~~~~D~vI~D~~~~~~---~~~A~~lgiP~v~~~~~~~~~~~~~~~-~~~~~~~~~ 159 (477)
.....+..........+.++++ +||+||+|.....+ ..+|+.+|||++.+..++........+ .........
T Consensus 70 ~~~~~~~~~~~~~~~~l~~~~~----~pD~Vi~~~~~~~~~~a~~~A~~lgiP~v~~~~~p~~~~~~~~~~~~~~~~~~~ 145 (404)
T 3h4t_A 70 GAAEVVTEVVAEWFDKVPAAIE----GCDAVVTTGLLPAAVAVRSMAEKLGIPYRYTVLSPDHLPSEQSQAERDMYNQGA 145 (404)
T ss_dssp TCGGGHHHHHHHHHHHHHHHHT----TCSEEEEEECHHHHHHHHHHHHHHTCCEEEEESSGGGSGGGSCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhc----CCCEEEECCchhhhhhhhhHHhhcCCCEEEEEcCCccCCChhHHHHHHHHHHHH
Confidence 1112222222222223333332 79999999765544 789999999999988776532111000 000000000
Q ss_pred CCCCCCCCCCCceecCCCCCCCC-CCCCCccccCCCCCChHHHHHHHhhhcccCCceEEEcChhhhchHHHHHhhhcCCc
Q 011792 160 LPVTDENFDKPVTCIPELENIFR-NRDLPSICRHGGPDDPILQTFIRDTSATTRTSALVINTFNEIEGPIISKLGSRLTK 238 (477)
Q Consensus 160 ~p~~~~~~~~~~~~~~~l~~~~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ns~~~le~p~l~~~~~~~p~ 238 (477)
+..+....|.+. ...++. ....... ...+..+++..+.+.+. ++..++
T Consensus 146 -----------~~~~~~~~~~~~~~lgl~~-------~~~~~~~--------~~~~~~l~~~~~~l~p~-----~~~~~~ 194 (404)
T 3h4t_A 146 -----------DRLFGDAVNSHRASIGLPP-------VEHLYDY--------GYTDQPWLAADPVLSPL-----RPTDLG 194 (404)
T ss_dssp -----------HHHHHHHHHHHHHHTTCCC-------CCCHHHH--------HHCSSCEECSCTTTSCC-----CTTCCS
T ss_pred -----------HHHhHHHHHHHHHHcCCCC-------Ccchhhc--------cccCCeEEeeCcceeCC-----CCCCCC
Confidence 000000000000 000000 0000000 01233456777766554 455578
Q ss_pred eeEeCccccccccccccccccCCCCccCcccCccccccccccccCCCCCcEEEEEecCcccCCHHHHHHHHHHHHhCCCc
Q 011792 239 IYTVGPLHALLKSRIQEDSVESSPLESNNCVLSKEDRSCMTWLGSQPSRSVLYVSFGSFIKLSGDQILEFWHGIVNSGKG 318 (477)
Q Consensus 239 ~~~vG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~a~~~~~~~ 318 (477)
++++|++...... ..++++.+|++ +++++|||++||+.. ..+.+..++++++..+.+
T Consensus 195 ~~~~G~~~~~~~~--------------------~~~~~l~~~l~--~~~~~Vlv~~Gs~~~-~~~~~~~~~~al~~~~~~ 251 (404)
T 3h4t_A 195 TVQTGAWILPDQR--------------------PLSAELEGFLR--AGSPPVYVGFGSGPA-PAEAARVAIEAVRAQGRR 251 (404)
T ss_dssp CCBCCCCCCCCCC--------------------CCCHHHHHHHH--TSSCCEEECCTTSCC-CTTHHHHHHHHHHHTTCC
T ss_pred eEEeCccccCCCC--------------------CCCHHHHHHHh--cCCCeEEEECCCCCC-cHHHHHHHHHHHHhCCCE
Confidence 9999988754221 23455777887 356899999999987 778899999999999999
Q ss_pred EEEEEecCCcCCCCCCCCCchhhHhhhcCCCceeeccCHHHHHhcccccccccccCchhHHHHhhcCCceecCCccchhh
Q 011792 319 FLWVIRSDLIDGESGVGPVPAELDQGTKERGCIVSWAPQEEVLAHQAIGGFLTHSGWNSTLESMVAGVPMICWPQVGDQQ 398 (477)
Q Consensus 319 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~~p~~~ll~~~~~~~~I~HGG~gs~~eal~~GvP~l~~P~~~DQ~ 398 (477)
+||..+..... .. ..++|+++.+|+||.++|+++++ ||||||+||+.|++++|+|+|++|+..||+
T Consensus 252 vv~~~g~~~~~------~~------~~~~~v~~~~~~~~~~ll~~~d~--~v~~gG~~t~~Eal~~GvP~v~~p~~~dQ~ 317 (404)
T 3h4t_A 252 VVLSSGWAGLG------RI------DEGDDCLVVGEVNHQVLFGRVAA--VVHHGGAGTTTAVTRAGAPQVVVPQKADQP 317 (404)
T ss_dssp EEEECTTTTCC------CS------SCCTTEEEESSCCHHHHGGGSSE--EEECCCHHHHHHHHHHTCCEEECCCSTTHH
T ss_pred EEEEeCCcccc------cc------cCCCCEEEecCCCHHHHHhhCcE--EEECCcHHHHHHHHHcCCCEEEcCCcccHH
Confidence 99998543111 11 13679999999999999998887 999999999999999999999999999999
Q ss_pred hhHHHHhhhhceeeecc-CCCCHHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHh
Q 011792 399 VNSRCVSEIWKIGFDMK-DTCDRSTIEKLVRDLMDNKRDKIMESTVQIAKMARDAVKEGGSSYRNLEKLIEDIRLM 473 (477)
Q Consensus 399 ~na~rv~~~~G~G~~l~-~~~~~~~l~~~v~~ll~~~~~~~~~~a~~l~~~~~~~~~~gg~~~~~~~~~i~~~~~~ 473 (477)
.||.++++ .|+|+.++ .+++++.|.++|+++|+ ++|+++++++++.+++ + ....+.+.|+++...
T Consensus 318 ~na~~~~~-~G~g~~l~~~~~~~~~l~~ai~~ll~---~~~~~~~~~~~~~~~~----~--~~~~~~~~i~~~~~~ 383 (404)
T 3h4t_A 318 YYAGRVAD-LGVGVAHDGPTPTVESLSAALATALT---PGIRARAAAVAGTIRT----D--GTTVAAKLLLEAISR 383 (404)
T ss_dssp HHHHHHHH-HTSEEECSSSSCCHHHHHHHHHHHTS---HHHHHHHHHHHTTCCC----C--HHHHHHHHHHHHHHC
T ss_pred HHHHHHHH-CCCEeccCcCCCCHHHHHHHHHHHhC---HHHHHHHHHHHHHHhh----h--HHHHHHHHHHHHHhh
Confidence 99999965 89999998 68899999999999997 6899999999998863 2 355667777777654
No 11
>3rsc_A CALG2; TDP, enediyne, structural genomics, PSI-2, protein structure initiative, center for eukaryotic structural genomics; HET: TYD C0T; 2.19A {Micromonospora echinospora} PDB: 3iaa_A*
Probab=100.00 E-value=5.5e-39 Score=320.77 Aligned_cols=384 Identities=14% Similarity=0.149 Sum_probs=260.1
Q ss_pred CCEEEEEcCCCCCCHHHHHHHHHHHHhCCCeEEEEeCCccchhccCCCcccccccCCCCeEEEeCCCCCCCCCCC---CC
Q 011792 6 VPHVVLLPFPAYGHIKPMLSLAKLFSHAGFRITFVNTDQYHDRLFGNTDVTAFYKHFPNFLCTSIPDGLPPDNPR---FG 82 (477)
Q Consensus 6 ~~~il~~~~~~~GHv~p~l~La~~L~~rGH~Vt~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~---~~ 82 (477)
+|||+|++.++.||++|+++||++|+++||+|+|++++.+.+.+.+ .+ +.+..++...+..... ..
T Consensus 20 m~rIl~~~~~~~GHv~p~l~La~~L~~~Gh~V~v~~~~~~~~~~~~-~G----------~~~~~~~~~~~~~~~~~~~~~ 88 (415)
T 3rsc_A 20 MAHLLIVNVASHGLILPTLTVVTELVRRGHRVSYVTAGGFAEPVRA-AG----------ATVVPYQSEIIDADAAEVFGS 88 (415)
T ss_dssp CCEEEEECCSCHHHHGGGHHHHHHHHHTTCEEEEEECGGGHHHHHH-TT----------CEEEECCCSTTTCCHHHHHHS
T ss_pred CCEEEEEeCCCccccccHHHHHHHHHHCCCEEEEEeCHHHHHHHHh-cC----------CEEEeccccccccccchhhcc
Confidence 5899999999999999999999999999999999998777766654 23 7788877544332100 00
Q ss_pred CChHHHHH----hhchhcHHHHHHHHhcCCCCCeEEEEC-CCcchHHHHHHHcCCCeEEEccCchhhHHHHhhhhhhhhc
Q 011792 83 IYTKDWFC----SNKPVSKLAFRQLLMTPGRLPTCIISD-SIMSFAIDVAEELNIPIITFRPYSAYCSWSDFHFSKLAEE 157 (477)
Q Consensus 83 ~~~~~~~~----~~~~~~~~~l~~~l~~~~~~~D~vI~D-~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~ 157 (477)
......+. .........+.+++++. +||+||+| ...+++..+|+.+|||++.+.+....... ....+...+.
T Consensus 89 ~~~~~~~~~~~~~~~~~~~~~l~~~l~~~--~PDlVi~d~~~~~~~~~aA~~~giP~v~~~~~~~~~~~-~~~~~~~~~~ 165 (415)
T 3rsc_A 89 DDLGVRPHLMYLRENVSVLRATAEALDGD--VPDLVLYDDFPFIAGQLLAARWRRPAVRLSAAFASNEH-YSFSQDMVTL 165 (415)
T ss_dssp SSSCHHHHHHHHHHHHHHHHHHHHHHSSS--CCSEEEEESTTHHHHHHHHHHTTCCEEEEESSCCCCSS-CCHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHhcc--CCCEEEECchhhhHHHHHHHHhCCCEEEEEecccccCc-cccccccccc
Confidence 01111111 11112345566677665 99999999 77778999999999999998755432100 0000000000
Q ss_pred CCCCCCCCCCCCCceecCCCCCCCCCCCCCccccCCCCCChHHHHHHHhhhcccC-CceEEEcChhhhchHHHHHhhhcC
Q 011792 158 GELPVTDENFDKPVTCIPELENIFRNRDLPSICRHGGPDDPILQTFIRDTSATTR-TSALVINTFNEIEGPIISKLGSRL 236 (477)
Q Consensus 158 ~~~p~~~~~~~~~~~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~ns~~~le~p~l~~~~~~~ 236 (477)
+.+ .. ...+.... ..+..+......... .. ..... .+..++...++++++. ....
T Consensus 166 -~~~-~~------p~~~~~~~-----~~~~~~~~~~g~~~~-~~------~~~~~~~~~~l~~~~~~~~~~~----~~~~ 221 (415)
T 3rsc_A 166 -AGT-ID------PLDLPVFR-----DTLRDLLAEHGLSRS-VV------DCWNHVEQLNLVFVPKAFQIAG----DTFD 221 (415)
T ss_dssp -HTC-CC------GGGCHHHH-----HHHHHHHHHTTCCCC-HH------HHHTCCCSEEEESSCTTTSTTG----GGCC
T ss_pred -ccc-CC------hhhHHHHH-----HHHHHHHHHcCCCCC-hh------hhhcCCCCeEEEEcCcccCCCc----ccCC
Confidence 000 00 00000000 000000000000000 00 00122 2777888877776651 2234
Q ss_pred CceeEeCccccccccccccccccCCCCccCcccCccccccccccccCCCCCcEEEEEecCcccCCHHHHHHHHHHHHhCC
Q 011792 237 TKIYTVGPLHALLKSRIQEDSVESSPLESNNCVLSKEDRSCMTWLGSQPSRSVLYVSFGSFIKLSGDQILEFWHGIVNSG 316 (477)
Q Consensus 237 p~~~~vG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~a~~~~~ 316 (477)
.++.++||+...... ..+|....+++++||+++||......+.+..++++++..+
T Consensus 222 ~~~~~vGp~~~~~~~-------------------------~~~~~~~~~~~~~v~v~~Gs~~~~~~~~~~~~~~al~~~~ 276 (415)
T 3rsc_A 222 DRFVFVGPCFDDRRF-------------------------LGEWTRPADDLPVVLVSLGTTFNDRPGFFRDCARAFDGQP 276 (415)
T ss_dssp TTEEECCCCCCCCGG-------------------------GCCCCCCSSCCCEEEEECTTTSCCCHHHHHHHHHHHTTSS
T ss_pred CceEEeCCCCCCccc-------------------------CcCccccCCCCCEEEEECCCCCCChHHHHHHHHHHHhcCC
Confidence 579999997643221 1135544567789999999998777788999999999988
Q ss_pred CcEEEEEecCCcCCCCCCCCCchhhHhhhcCCCceeeccCHHHHHhcccccccccccCchhHHHHhhcCCceecCCccch
Q 011792 317 KGFLWVIRSDLIDGESGVGPVPAELDQGTKERGCIVSWAPQEEVLAHQAIGGFLTHSGWNSTLESMVAGVPMICWPQVGD 396 (477)
Q Consensus 317 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~~p~~~ll~~~~~~~~I~HGG~gs~~eal~~GvP~l~~P~~~D 396 (477)
.+++|.++.. .....+ +..++|+++.+|+|+.++|+++++ ||||||.||++|++++|+|+|++|...|
T Consensus 277 ~~~v~~~g~~---------~~~~~l-~~~~~~v~~~~~~~~~~ll~~ad~--~v~~~G~~t~~Ea~~~G~P~v~~p~~~~ 344 (415)
T 3rsc_A 277 WHVVMTLGGQ---------VDPAAL-GDLPPNVEAHRWVPHVKVLEQATV--CVTHGGMGTLMEALYWGRPLVVVPQSFD 344 (415)
T ss_dssp CEEEEECTTT---------SCGGGG-CCCCTTEEEESCCCHHHHHHHEEE--EEESCCHHHHHHHHHTTCCEEECCCSGG
T ss_pred cEEEEEeCCC---------CChHHh-cCCCCcEEEEecCCHHHHHhhCCE--EEECCcHHHHHHHHHhCCCEEEeCCcch
Confidence 8888888432 111111 235689999999999999999998 9999999999999999999999999999
Q ss_pred hhhhHHHHhhhhceeeecc-CCCCHHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHH
Q 011792 397 QQVNSRCVSEIWKIGFDMK-DTCDRSTIEKLVRDLMDNKRDKIMESTVQIAKMARDAVKEGGSSYRNLEKLIEDIRL 472 (477)
Q Consensus 397 Q~~na~rv~~~~G~G~~l~-~~~~~~~l~~~v~~ll~~~~~~~~~~a~~l~~~~~~~~~~gg~~~~~~~~~i~~~~~ 472 (477)
|+.||.++++ .|+|+.+. .+++++.|.+++.++|+| ++++++++++++.+.+. +| ...+.+.|++++.
T Consensus 345 q~~~a~~l~~-~g~g~~~~~~~~~~~~l~~~i~~ll~~--~~~~~~~~~~~~~~~~~---~~--~~~~~~~i~~~~~ 413 (415)
T 3rsc_A 345 VQPMARRVDQ-LGLGAVLPGEKADGDTLLAAVGAVAAD--PALLARVEAMRGHVRRA---GG--AARAADAVEAYLA 413 (415)
T ss_dssp GHHHHHHHHH-HTCEEECCGGGCCHHHHHHHHHHHHTC--HHHHHHHHHHHHHHHHS---CH--HHHHHHHHHHHHH
T ss_pred HHHHHHHHHH-cCCEEEcccCCCCHHHHHHHHHHHHcC--HHHHHHHHHHHHHHHhc---CH--HHHHHHHHHHHhh
Confidence 9999999965 79999998 578999999999999999 99999999999999873 33 4556666666654
No 12
>3ia7_A CALG4; glycosysltransferase, calicheamicin, enediyne, transf; 1.91A {Micromonospora echinospora}
Probab=100.00 E-value=4.2e-38 Score=312.92 Aligned_cols=385 Identities=17% Similarity=0.173 Sum_probs=259.5
Q ss_pred CEEEEEcCCCCCCHHHHHHHHHHHHhCCCeEEEEeCCccchhccCCCcccccccCCCCeEEEeCCCCCCCCCC---CCCC
Q 011792 7 PHVVLLPFPAYGHIKPMLSLAKLFSHAGFRITFVNTDQYHDRLFGNTDVTAFYKHFPNFLCTSIPDGLPPDNP---RFGI 83 (477)
Q Consensus 7 ~~il~~~~~~~GHv~p~l~La~~L~~rGH~Vt~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~---~~~~ 83 (477)
+||++++.++.||++|+++||++|+++||+|+|++++.+.+.+.+ .+ +.+..++..++.... ....
T Consensus 5 ~~il~~~~~~~Ghv~~~~~La~~L~~~GheV~v~~~~~~~~~~~~-~G----------~~~~~~~~~~~~~~~~~~~~~~ 73 (402)
T 3ia7_A 5 RHILFANVQGHGHVYPSLGLVSELARRGHRITYVTTPLFADEVKA-AG----------AEVVLYKSEFDTFHVPEVVKQE 73 (402)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHHTTCEEEEEECHHHHHHHHH-TT----------CEEEECCCGGGTSSSSSSSCCT
T ss_pred CEEEEEeCCCCcccccHHHHHHHHHhCCCEEEEEcCHHHHHHHHH-cC----------CEEEeccccccccccccccccc
Confidence 499999999999999999999999999999999999776666654 22 777777643332111 1112
Q ss_pred ChHHHHHh-hch---hcHHHHHHHHhcCCCCCeEEEEC-CCcchHHHHHHHcCCCeEEEccCchhhHHHHhhhhhhhhcC
Q 011792 84 YTKDWFCS-NKP---VSKLAFRQLLMTPGRLPTCIISD-SIMSFAIDVAEELNIPIITFRPYSAYCSWSDFHFSKLAEEG 158 (477)
Q Consensus 84 ~~~~~~~~-~~~---~~~~~l~~~l~~~~~~~D~vI~D-~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~ 158 (477)
.....+.. +.. .....+.+++++. +||+||+| .+..++..+|+.+|||++.+.+.......... .+...+..
T Consensus 74 ~~~~~~~~~~~~~~~~~~~~l~~~l~~~--~pD~Vi~d~~~~~~~~~aA~~~giP~v~~~~~~~~~~~~~~-~~~~~~~~ 150 (402)
T 3ia7_A 74 DAETQLHLVYVRENVAILRAAEEALGDN--PPDLVVYDVFPFIAGRLLAARWDRPAVRLTGGFAANEHYSL-FKELWKSN 150 (402)
T ss_dssp THHHHHHHHHHHHHHHHHHHHHHHHTTC--CCSEEEEESTTHHHHHHHHHHHTCCEEEEESSCCCBTTBCH-HHHHHHHH
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHhcc--CCCEEEECchHHHHHHHHHHhhCCCEEEEecccccCccccc-cccccccc
Confidence 22222222 222 2345566666665 99999999 77778999999999999998754432110000 00000000
Q ss_pred CCCCCCCCCCCCceecCCCCCCCCCCCCCccccCCCCCChHHHHHHHhhhcccC-CceEEEcChhhhchHHHHHhhhcCC
Q 011792 159 ELPVTDENFDKPVTCIPELENIFRNRDLPSICRHGGPDDPILQTFIRDTSATTR-TSALVINTFNEIEGPIISKLGSRLT 237 (477)
Q Consensus 159 ~~p~~~~~~~~~~~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~ns~~~le~p~l~~~~~~~p 237 (477)
. . .... ....+. ..+..+........ ....+ ... .+..++...++++++. .....
T Consensus 151 ~-~-~~~~---~~~~~~--------~~~~~~~~~~g~~~-~~~~~------~~~~~~~~l~~~~~~~~~~~----~~~~~ 206 (402)
T 3ia7_A 151 G-Q-RHPA---DVEAVH--------SVLVDLLGKYGVDT-PVKEY------WDEIEGLTIVFLPKSFQPFA----ETFDE 206 (402)
T ss_dssp T-C-CCGG---GSHHHH--------HHHHHHHHTTTCCS-CHHHH------HTCCCSCEEESSCGGGSTTG----GGCCT
T ss_pred c-c-cChh---hHHHHH--------HHHHHHHHHcCCCC-Chhhh------hcCCCCeEEEEcChHhCCcc----ccCCC
Confidence 0 0 0000 000000 00000000000000 00000 122 2667777777776551 22345
Q ss_pred ceeEeCccccccccccccccccCCCCccCcccCccccccccccccCCCCCcEEEEEecCcccCCHHHHHHHHHHHHhCCC
Q 011792 238 KIYTVGPLHALLKSRIQEDSVESSPLESNNCVLSKEDRSCMTWLGSQPSRSVLYVSFGSFIKLSGDQILEFWHGIVNSGK 317 (477)
Q Consensus 238 ~~~~vG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~a~~~~~~ 317 (477)
++.+|||+...... ..+|....+++++||+++||......+.+..++++++..+.
T Consensus 207 ~~~~vGp~~~~~~~-------------------------~~~~~~~~~~~~~v~v~~G~~~~~~~~~~~~~~~~~~~~~~ 261 (402)
T 3ia7_A 207 RFAFVGPTLTGRDG-------------------------QPGWQPPRPDAPVLLVSLGNQFNEHPEFFRACAQAFADTPW 261 (402)
T ss_dssp TEEECCCCCCC-----------------------------CCCCCSSTTCCEEEEECCSCSSCCHHHHHHHHHHHTTSSC
T ss_pred CeEEeCCCCCCccc-------------------------CCCCcccCCCCCEEEEECCCCCcchHHHHHHHHHHHhcCCc
Confidence 79999997643221 11355445677899999999987777889999999998888
Q ss_pred cEEEEEecCCcCCCCCCCCCchhhHhhhcCCCceeeccCHHHHHhcccccccccccCchhHHHHhhcCCceecCCc-cch
Q 011792 318 GFLWVIRSDLIDGESGVGPVPAELDQGTKERGCIVSWAPQEEVLAHQAIGGFLTHSGWNSTLESMVAGVPMICWPQ-VGD 396 (477)
Q Consensus 318 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~~p~~~ll~~~~~~~~I~HGG~gs~~eal~~GvP~l~~P~-~~D 396 (477)
+++|.++.. .....+ +..++|+.+.+|+|+.++|+++++ +|||||.||+.|++++|+|+|++|. ..|
T Consensus 262 ~~~~~~g~~---------~~~~~~-~~~~~~v~~~~~~~~~~ll~~ad~--~v~~~G~~t~~Ea~~~G~P~v~~p~~~~~ 329 (402)
T 3ia7_A 262 HVVMAIGGF---------LDPAVL-GPLPPNVEAHQWIPFHSVLAHARA--CLTHGTTGAVLEAFAAGVPLVLVPHFATE 329 (402)
T ss_dssp EEEEECCTT---------SCGGGG-CSCCTTEEEESCCCHHHHHTTEEE--EEECCCHHHHHHHHHTTCCEEECGGGCGG
T ss_pred EEEEEeCCc---------CChhhh-CCCCCcEEEecCCCHHHHHhhCCE--EEECCCHHHHHHHHHhCCCEEEeCCCccc
Confidence 888888432 111111 225689999999999999999998 9999999999999999999999999 999
Q ss_pred hhhhHHHHhhhhceeeecc-CCCCHHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHhh
Q 011792 397 QQVNSRCVSEIWKIGFDMK-DTCDRSTIEKLVRDLMDNKRDKIMESTVQIAKMARDAVKEGGSSYRNLEKLIEDIRLMA 474 (477)
Q Consensus 397 Q~~na~rv~~~~G~G~~l~-~~~~~~~l~~~v~~ll~~~~~~~~~~a~~l~~~~~~~~~~gg~~~~~~~~~i~~~~~~~ 474 (477)
|..||.++++ .|+|..+. ++++++.|.+++.++|+| ++++++++++++.+.+. + +...+.+.|+++....
T Consensus 330 q~~~a~~~~~-~g~g~~~~~~~~~~~~l~~~~~~ll~~--~~~~~~~~~~~~~~~~~----~-~~~~~~~~i~~~~~~~ 400 (402)
T 3ia7_A 330 AAPSAERVIE-LGLGSVLRPDQLEPASIREAVERLAAD--SAVRERVRRMQRDILSS----G-GPARAADEVEAYLGRV 400 (402)
T ss_dssp GHHHHHHHHH-TTSEEECCGGGCSHHHHHHHHHHHHHC--HHHHHHHHHHHHHHHTS----C-HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHH-cCCEEEccCCCCCHHHHHHHHHHHHcC--HHHHHHHHHHHHHHhhC----C-hHHHHHHHHHHHHhhc
Confidence 9999999965 79999998 578999999999999999 99999999999998763 3 3456677777776543
No 13
>2yjn_A ERYCIII, glycosyltransferase; transferase, cytochrome P450; 3.09A {Saccharopolyspora erythraea}
Probab=100.00 E-value=1.1e-38 Score=320.96 Aligned_cols=374 Identities=13% Similarity=0.100 Sum_probs=241.8
Q ss_pred CCEEEEEcCCCCCCHHHHHHHHHHHHhCCCeEEEEeCCccchhccCCCcccccccCCCCeEEEeCCCCCCCCC-------
Q 011792 6 VPHVVLLPFPAYGHIKPMLSLAKLFSHAGFRITFVNTDQYHDRLFGNTDVTAFYKHFPNFLCTSIPDGLPPDN------- 78 (477)
Q Consensus 6 ~~~il~~~~~~~GHv~p~l~La~~L~~rGH~Vt~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~------- 78 (477)
.|||+|++.++.||++|+++||++|+++||+|+|++++.+.+.+.+ .+ +.|..++...+...
T Consensus 20 ~mrIl~~~~~~~GHv~p~l~la~~L~~~GheV~~~~~~~~~~~v~~-~G----------~~~~~i~~~~~~~~~~~~~~~ 88 (441)
T 2yjn_A 20 HMRVVFSSMASKSHLFGLVPLAWAFRAAGHEVRVVASPALTEDITA-AG----------LTAVPVGTDVDLVDFMTHAGH 88 (441)
T ss_dssp CCEEEEECCSCHHHHTTTHHHHHHHHHTTCEEEEEECGGGHHHHHT-TT----------CCEEECSCCCCHHHHHHHTTH
T ss_pred ccEEEEEcCCCcchHhHHHHHHHHHHHCCCeEEEEeCchhHHHHHh-CC----------CceeecCCccchHHHhhhhhc
Confidence 4899999999999999999999999999999999999776555444 33 77777774321000
Q ss_pred --------CCC----CC--ChH------HHHHhhch-----h-cHHHHHHHHhcCCCCCeEEEECCCcchHHHHHHHcCC
Q 011792 79 --------PRF----GI--YTK------DWFCSNKP-----V-SKLAFRQLLMTPGRLPTCIISDSIMSFAIDVAEELNI 132 (477)
Q Consensus 79 --------~~~----~~--~~~------~~~~~~~~-----~-~~~~l~~~l~~~~~~~D~vI~D~~~~~~~~~A~~lgi 132 (477)
... .. ... ..+..+.. . ....+.+++++. +||+||+|.+..++..+|+.+||
T Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~--~pDlVv~d~~~~~~~~aA~~lgi 166 (441)
T 2yjn_A 89 DIIDYVRSLDFSERDPATLTWEHLLGMQTVLTPTFYALMSPDTLIEGMVSFCRKW--RPDLVIWEPLTFAAPIAAAVTGT 166 (441)
T ss_dssp HHHHHHTTCCCTTCCGGGGSHHHHHHHHHHHHHHTTTTSSCHHHHHHHHHHHHHH--CCSEEEECTTCTHHHHHHHHHTC
T ss_pred ccccccccccccccCcchhhhhhhhhHHHHHHHHHHhhcchHHHHHHHHHHHHhc--CCCEEEecCcchhHHHHHHHcCC
Confidence 000 00 100 11211111 1 334444555554 89999999987899999999999
Q ss_pred CeEEEccCchhhHHHHhhhhhhhhcCCCCCCCCCCCCCceecCCCCCCCCCCCCCccccCCCCCChHHHHHHHhhhc---
Q 011792 133 PIITFRPYSAYCSWSDFHFSKLAEEGELPVTDENFDKPVTCIPELENIFRNRDLPSICRHGGPDDPILQTFIRDTSA--- 209 (477)
Q Consensus 133 P~v~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~--- 209 (477)
|++.+...+....... .+.+....+.|... ..+ . .......+......
T Consensus 167 P~v~~~~~~~~~~~~~--~~~~~~~~~~~~~~------------~~~---------~------~~~~l~~~~~~~g~~~~ 217 (441)
T 2yjn_A 167 PHARLLWGPDITTRAR--QNFLGLLPDQPEEH------------RED---------P------LAEWLTWTLEKYGGPAF 217 (441)
T ss_dssp CEEEECSSCCHHHHHH--HHHHHHGGGSCTTT------------CCC---------H------HHHHHHHHHHHTTCCCC
T ss_pred CEEEEecCCCcchhhh--hhhhhhcccccccc------------ccc---------h------HHHHHHHHHHHcCCCCC
Confidence 9999865443211100 01000011111000 000 0 00001111111000
Q ss_pred ---ccCCceEEEcChhhhchHHHHHhhhcCCceeEeCccccccccccccccccCCCCccCcccCccccccccccccCCCC
Q 011792 210 ---TTRTSALVINTFNEIEGPIISKLGSRLTKIYTVGPLHALLKSRIQEDSVESSPLESNNCVLSKEDRSCMTWLGSQPS 286 (477)
Q Consensus 210 ---~~~~~~~l~ns~~~le~p~l~~~~~~~p~~~~vG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 286 (477)
....+.++..+.+.++++ .. ++. ..+++.... .+.++.+|++..++
T Consensus 218 ~~~~~~~~~~l~~~~~~~~~~-----~~-~~~-~~~~~~~~~------------------------~~~~~~~~l~~~~~ 266 (441)
T 2yjn_A 218 DEEVVVGQWTIDPAPAAIRLD-----TG-LKT-VGMRYVDYN------------------------GPSVVPEWLHDEPE 266 (441)
T ss_dssp CGGGTSCSSEEECSCGGGSCC-----CC-CCE-EECCCCCCC------------------------SSCCCCGGGSSCCS
T ss_pred CccccCCCeEEEecCccccCC-----CC-CCC-CceeeeCCC------------------------CCcccchHhhcCCC
Confidence 012445666665555442 11 111 112211100 11224468875567
Q ss_pred CcEEEEEecCcccC---CHHHHHHHHHHHHhCCCcEEEEEecCCcCCCCCCCCCchhhHhhhcCCCceeeccCHHHHHhc
Q 011792 287 RSVLYVSFGSFIKL---SGDQILEFWHGIVNSGKGFLWVIRSDLIDGESGVGPVPAELDQGTKERGCIVSWAPQEEVLAH 363 (477)
Q Consensus 287 ~~~v~vs~Gs~~~~---~~~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~~p~~~ll~~ 363 (477)
+++|||++||.... ..+.+..+++++...+.++||+.++.... .+. ..++|+++.+|+||.++|+.
T Consensus 267 ~~~v~v~~Gs~~~~~~~~~~~~~~~~~al~~~~~~~v~~~g~~~~~------~l~-----~~~~~v~~~~~~~~~~ll~~ 335 (441)
T 2yjn_A 267 RRRVCLTLGISSRENSIGQVSIEELLGAVGDVDAEIIATFDAQQLE------GVA-----NIPDNVRTVGFVPMHALLPT 335 (441)
T ss_dssp SCEEEEEC----------CCSTTTTHHHHHTSSSEEEECCCTTTTS------SCS-----SCCSSEEECCSCCHHHHGGG
T ss_pred CCEEEEECCCCcccccChHHHHHHHHHHHHcCCCEEEEEECCcchh------hhc-----cCCCCEEEecCCCHHHHHhh
Confidence 78999999998753 34567778899988899999988543111 121 14679999999999999988
Q ss_pred ccccccccccCchhHHHHhhcCCceecCCccchhhhhHHHHhhhhceeeecc-CCCCHHHHHHHHHHHHhHhHHHHHHHH
Q 011792 364 QAIGGFLTHSGWNSTLESMVAGVPMICWPQVGDQQVNSRCVSEIWKIGFDMK-DTCDRSTIEKLVRDLMDNKRDKIMEST 442 (477)
Q Consensus 364 ~~~~~~I~HGG~gs~~eal~~GvP~l~~P~~~DQ~~na~rv~~~~G~G~~l~-~~~~~~~l~~~v~~ll~~~~~~~~~~a 442 (477)
+++ ||||||+||++|++++|||+|++|+..||+.||.++++ .|+|+.++ ++++++.|.++|.++|+| +++++++
T Consensus 336 ad~--~V~~~G~~t~~Ea~~~G~P~i~~p~~~dQ~~na~~l~~-~g~g~~~~~~~~~~~~l~~~i~~ll~~--~~~~~~~ 410 (441)
T 2yjn_A 336 CAA--TVHHGGPGSWHTAAIHGVPQVILPDGWDTGVRAQRTQE-FGAGIALPVPELTPDQLRESVKRVLDD--PAHRAGA 410 (441)
T ss_dssp CSE--EEECCCHHHHHHHHHTTCCEEECCCSHHHHHHHHHHHH-HTSEEECCTTTCCHHHHHHHHHHHHHC--HHHHHHH
T ss_pred CCE--EEECCCHHHHHHHHHhCCCEEEeCCcccHHHHHHHHHH-cCCEEEcccccCCHHHHHHHHHHHhcC--HHHHHHH
Confidence 887 99999999999999999999999999999999999965 79999998 578999999999999999 9999999
Q ss_pred HHHHHHHHHHHHcCCChHHHHHHHHHHHHHh
Q 011792 443 VQIAKMARDAVKEGGSSYRNLEKLIEDIRLM 473 (477)
Q Consensus 443 ~~l~~~~~~~~~~gg~~~~~~~~~i~~~~~~ 473 (477)
+++++.+++. +| ...+.+.|+++...
T Consensus 411 ~~~~~~~~~~---~~--~~~~~~~i~~~~~~ 436 (441)
T 2yjn_A 411 ARMRDDMLAE---PS--PAEVVGICEELAAG 436 (441)
T ss_dssp HHHHHHHHTS---CC--HHHHHHHHHHHHHC
T ss_pred HHHHHHHHcC---CC--HHHHHHHHHHHHHh
Confidence 9999999764 44 55667777777654
No 14
>2p6p_A Glycosyl transferase; X-RAY-diffraction,urdamycina-biosynthesis; 1.88A {Streptomyces fradiae}
Probab=100.00 E-value=9.1e-38 Score=308.71 Aligned_cols=357 Identities=12% Similarity=0.124 Sum_probs=247.7
Q ss_pred CEEEEEcCCCCCCHHHHHHHHHHHHhCCCeEEEEeCCccchhccCCCcccccccCCCCeEEEeCCCCCC-CC------CC
Q 011792 7 PHVVLLPFPAYGHIKPMLSLAKLFSHAGFRITFVNTDQYHDRLFGNTDVTAFYKHFPNFLCTSIPDGLP-PD------NP 79 (477)
Q Consensus 7 ~~il~~~~~~~GHv~p~l~La~~L~~rGH~Vt~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~-~~------~~ 79 (477)
|||++++.++.||++|+++||++|+++||+|++++++.+.+.+.. .+ +.+..++.... .. ..
T Consensus 1 MrIl~~~~~~~Gh~~p~~~la~~L~~~Gh~V~~~~~~~~~~~~~~-~g----------~~~~~~~~~~~~~~~~~~~~~~ 69 (384)
T 2p6p_A 1 MRILFVAAGSPATVFALAPLATAARNAGHQVVMAANQDMGPVVTG-VG----------LPAVATTDLPIRHFITTDREGR 69 (384)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHHH-TT----------CCEEESCSSCHHHHHHBCTTSC
T ss_pred CEEEEEeCCccchHhHHHHHHHHHHHCCCEEEEEeCHHHHHHHHh-CC----------CEEEEeCCcchHHHHhhhcccC
Confidence 689999999999999999999999999999999998765444433 22 66666654220 00 00
Q ss_pred C-CC-C--ChHHHH-Hh----hchhcHHHHHHHHhcCCCCCeEEEECCCcchHHHHHHHcCCCeEEEccCchhhHHHHhh
Q 011792 80 R-FG-I--YTKDWF-CS----NKPVSKLAFRQLLMTPGRLPTCIISDSIMSFAIDVAEELNIPIITFRPYSAYCSWSDFH 150 (477)
Q Consensus 80 ~-~~-~--~~~~~~-~~----~~~~~~~~l~~~l~~~~~~~D~vI~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~ 150 (477)
. .. . .....+ .. ........+.+++++. +||+||+|.+..++..+|+.+|||++.+...+...
T Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~--~pD~Vi~~~~~~~~~~~a~~~giP~v~~~~~~~~~------ 141 (384)
T 2p6p_A 70 PEAIPSDPVAQARFTGRWFARMAASSLPRMLDFSRAW--RPDLIVGGTMSYVAPLLALHLGVPHARQTWDAVDA------ 141 (384)
T ss_dssp BCCCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--CCSEEEEETTCTHHHHHHHHHTCCEEEECCSSCCC------
T ss_pred ccccCcchHHHHHHHHHHHHhhHHHHHHHHHHHHhcc--CCcEEEECcchhhHHHHHHhcCCCEEEeccCCccc------
Confidence 0 00 1 111111 11 1112234455566654 89999999887788899999999999875332100
Q ss_pred hhhhhhcCCCCCCCCCCCCCceecCCCCCCCCCCCCCccccCCCCCChHHHHHHHhh--hcccCCceEEEcChhhhchHH
Q 011792 151 FSKLAEEGELPVTDENFDKPVTCIPELENIFRNRDLPSICRHGGPDDPILQTFIRDT--SATTRTSALVINTFNEIEGPI 228 (477)
Q Consensus 151 ~~~~~~~~~~p~~~~~~~~~~~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~ns~~~le~p~ 228 (477)
+ +... .+. .......... .....++.+++++.+.++++
T Consensus 142 --------------~----------~~~~---------~~~------~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~- 181 (384)
T 2p6p_A 142 --------------D----------GIHP---------GAD------AELRPELSELGLERLPAPDLFIDICPPSLRPA- 181 (384)
T ss_dssp --------------T----------TTHH---------HHH------HHTHHHHHHTTCSSCCCCSEEEECSCGGGSCT-
T ss_pred --------------c----------hhhH---------HHH------HHHHHHHHHcCCCCCCCCCeEEEECCHHHCCC-
Confidence 0 0000 000 0000111111 00112578899998887765
Q ss_pred HHHhhhcC-CceeEeCccccccccccccccccCCCCccCcccCccccccccccccCCCCCcEEEEEecCcccC-----CH
Q 011792 229 ISKLGSRL-TKIYTVGPLHALLKSRIQEDSVESSPLESNNCVLSKEDRSCMTWLGSQPSRSVLYVSFGSFIKL-----SG 302 (477)
Q Consensus 229 l~~~~~~~-p~~~~vG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~Gs~~~~-----~~ 302 (477)
.+.. +++.+++. . . +.++.+|++..+++++||+++||.... +.
T Consensus 182 ----~~~~~~~~~~~~~-~--~------------------------~~~~~~~l~~~~~~~~v~v~~Gs~~~~~~~~~~~ 230 (384)
T 2p6p_A 182 ----NAAPARMMRHVAT-S--R------------------------QCPLEPWMYTRDTRQRVLVTSGSRVAKESYDRNF 230 (384)
T ss_dssp ----TSCCCEECCCCCC-C--C------------------------CCBCCHHHHCCCSSCEEEEECSSSSSCCSSCCCC
T ss_pred ----CCCCCCceEecCC-C--C------------------------CCCCCchhhcCCCCCEEEEECCCCCccccccccH
Confidence 2222 23344421 0 0 112345877545678999999999764 45
Q ss_pred HHHHHHHHHHHhCCCcEEEEEecCCcCCCCCCCCCchhhHhhhcCCCceeeccCHHHHHhcccccccccccCchhHHHHh
Q 011792 303 DQILEFWHGIVNSGKGFLWVIRSDLIDGESGVGPVPAELDQGTKERGCIVSWAPQEEVLAHQAIGGFLTHSGWNSTLESM 382 (477)
Q Consensus 303 ~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~~p~~~ll~~~~~~~~I~HGG~gs~~eal 382 (477)
+.+..++++++..+.+++|+.++. ....+ +..++|+.+ +|+||.++|+++++ ||||||+||++||+
T Consensus 231 ~~~~~~~~al~~~~~~~~~~~g~~----------~~~~l-~~~~~~v~~-~~~~~~~~l~~~d~--~v~~~G~~t~~Ea~ 296 (384)
T 2p6p_A 231 DFLRGLAKDLVRWDVELIVAAPDT----------VAEAL-RAEVPQARV-GWTPLDVVAPTCDL--LVHHAGGVSTLTGL 296 (384)
T ss_dssp TTHHHHHHHHHTTTCEEEEECCHH----------HHHHH-HHHCTTSEE-ECCCHHHHGGGCSE--EEECSCTTHHHHHH
T ss_pred HHHHHHHHHHhcCCcEEEEEeCCC----------CHHhh-CCCCCceEE-cCCCHHHHHhhCCE--EEeCCcHHHHHHHH
Confidence 778889999998899999988421 11111 235789999 99999999988887 99999999999999
Q ss_pred hcCCceecCCccchhhhhHHHHhhhhceeeecc-CCCCHHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHHHHHcCCChHH
Q 011792 383 VAGVPMICWPQVGDQQVNSRCVSEIWKIGFDMK-DTCDRSTIEKLVRDLMDNKRDKIMESTVQIAKMARDAVKEGGSSYR 461 (477)
Q Consensus 383 ~~GvP~l~~P~~~DQ~~na~rv~~~~G~G~~l~-~~~~~~~l~~~v~~ll~~~~~~~~~~a~~l~~~~~~~~~~gg~~~~ 461 (477)
++|+|+|++|...||..||.++++ .|+|+.++ +..++++|.++|.++|+| ++++++++++++.+++. +| ..
T Consensus 297 ~~G~P~v~~p~~~dq~~~a~~~~~-~g~g~~~~~~~~~~~~l~~~i~~ll~~--~~~~~~~~~~~~~~~~~---~~--~~ 368 (384)
T 2p6p_A 297 SAGVPQLLIPKGSVLEAPARRVAD-YGAAIALLPGEDSTEAIADSCQELQAK--DTYARRAQDLSREISGM---PL--PA 368 (384)
T ss_dssp HTTCCEEECCCSHHHHHHHHHHHH-HTSEEECCTTCCCHHHHHHHHHHHHHC--HHHHHHHHHHHHHHHTS---CC--HH
T ss_pred HhCCCEEEccCcccchHHHHHHHH-CCCeEecCcCCCCHHHHHHHHHHHHcC--HHHHHHHHHHHHHHHhC---CC--HH
Confidence 999999999999999999999965 79999997 578999999999999999 99999999999999874 44 56
Q ss_pred HHHHHHHHHHHhhh
Q 011792 462 NLEKLIEDIRLMAF 475 (477)
Q Consensus 462 ~~~~~i~~~~~~~~ 475 (477)
.+.+.|+.+..-++
T Consensus 369 ~~~~~i~~~~~~~~ 382 (384)
T 2p6p_A 369 TVVTALEQLAHHHH 382 (384)
T ss_dssp HHHHHHHHHHHHHC
T ss_pred HHHHHHHHHhhhcc
Confidence 66788888876554
No 15
>2iyf_A OLED, oleandomycin glycosyltransferase; antibiotic resistance, glycosylation, enzyme, macrolide, carbohydrate; HET: ERY UDP; 1.7A {Streptomyces antibioticus}
Probab=100.00 E-value=3.5e-37 Score=309.19 Aligned_cols=388 Identities=17% Similarity=0.205 Sum_probs=253.3
Q ss_pred CCCCC-CCEEEEEcCCCCCCHHHHHHHHHHHHhCCCeEEEEeCCccchhccCCCcccccccCCCCeEEEeCCCCCCCCCC
Q 011792 1 MEQTR-VPHVVLLPFPAYGHIKPMLSLAKLFSHAGFRITFVNTDQYHDRLFGNTDVTAFYKHFPNFLCTSIPDGLPPDNP 79 (477)
Q Consensus 1 m~~~~-~~~il~~~~~~~GHv~p~l~La~~L~~rGH~Vt~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 79 (477)
|..++ +|||++++.++.||++|+++|+++|+++||+|+++++..+.+.+.+ .+ +.+..++...+....
T Consensus 1 M~~~m~m~kIl~~~~~~~Gh~~p~~~la~~L~~~G~~V~~~~~~~~~~~~~~-~g----------~~~~~~~~~~~~~~~ 69 (430)
T 2iyf_A 1 MTTQTTPAHIAMFSIAAHGHVNPSLEVIRELVARGHRVTYAIPPVFADKVAA-TG----------PRPVLYHSTLPGPDA 69 (430)
T ss_dssp -------CEEEEECCSCHHHHGGGHHHHHHHHHTTCEEEEEECGGGHHHHHT-TS----------CEEEECCCCSCCTTS
T ss_pred CCCccccceEEEEeCCCCccccchHHHHHHHHHCCCeEEEEeCHHHHHHHHh-CC----------CEEEEcCCcCccccc
Confidence 55443 4799999999999999999999999999999999999776555444 22 677777754332211
Q ss_pred C---CCCChHHHHHhhc---hhcHHHHHHHHhcCCCCCeEEEECCCcchHHHHHHHcCCCeEEEccCchhhHHHHhhhhh
Q 011792 80 R---FGIYTKDWFCSNK---PVSKLAFRQLLMTPGRLPTCIISDSIMSFAIDVAEELNIPIITFRPYSAYCSWSDFHFSK 153 (477)
Q Consensus 80 ~---~~~~~~~~~~~~~---~~~~~~l~~~l~~~~~~~D~vI~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~ 153 (477)
. ........+..+. ......+.+++++. +||+||+|...+++..+|+.+|||++.+++.+.........+..
T Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~--~pD~Vi~d~~~~~~~~~A~~~giP~v~~~~~~~~~~~~~~~~~~ 147 (430)
T 2iyf_A 70 DPEAWGSTLLDNVEPFLNDAIQALPQLADAYADD--IPDLVLHDITSYPARVLARRWGVPAVSLSPNLVAWKGYEEEVAE 147 (430)
T ss_dssp CGGGGCSSHHHHHHHHHHHHHHHHHHHHHHHTTS--CCSEEEEETTCHHHHHHHHHHTCCEEEEESSCCCCTTHHHHTHH
T ss_pred cccccchhhHHHHHHHHHHHHHHHHHHHHHhhcc--CCCEEEECCccHHHHHHHHHcCCCEEEEeccccccccccccccc
Confidence 0 0112222222222 12345566777665 99999999877789999999999999988765311000000000
Q ss_pred hhhcCCCCCCCCCCCCCceecCCCCCCCCCCCCCccccCCCCCChHHHHHHHhhhcccCCceEEEcChhhhchHHHHHhh
Q 011792 154 LAEEGELPVTDENFDKPVTCIPELENIFRNRDLPSICRHGGPDDPILQTFIRDTSATTRTSALVINTFNEIEGPIISKLG 233 (477)
Q Consensus 154 ~~~~~~~p~~~~~~~~~~~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ns~~~le~p~l~~~~ 233 (477)
+... .....++... + ...+..+......... .. ......+.+++++.++++++. .
T Consensus 148 ~~~~------------~~~~~~~~~~-~-~~~~~~~~~~~g~~~~-~~------~~~~~~~~~l~~~~~~~~~~~----~ 202 (430)
T 2iyf_A 148 PMWR------------EPRQTERGRA-Y-YARFEAWLKENGITEH-PD------TFASHPPRSLVLIPKALQPHA----D 202 (430)
T ss_dssp HHHH------------HHHHSHHHHH-H-HHHHHHHHHHTTCCSC-HH------HHHHCCSSEEECSCGGGSTTG----G
T ss_pred chhh------------hhccchHHHH-H-HHHHHHHHHHhCCCCC-HH------HHhcCCCcEEEeCcHHhCCCc----c
Confidence 0000 0000000000 0 0000000000000000 00 001246789999988887652 3
Q ss_pred hcCCc-eeEeCccccccccccccccccCCCCccCcccCccccccccccccCCCCCcEEEEEecCcccCCHHHHHHHHHHH
Q 011792 234 SRLTK-IYTVGPLHALLKSRIQEDSVESSPLESNNCVLSKEDRSCMTWLGSQPSRSVLYVSFGSFIKLSGDQILEFWHGI 312 (477)
Q Consensus 234 ~~~p~-~~~vG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~a~ 312 (477)
+..++ +++|||...... . ..+|....+++++||+++||......+.+..+++++
T Consensus 203 ~~~~~~v~~vG~~~~~~~---------~----------------~~~~~~~~~~~~~v~v~~Gs~~~~~~~~~~~~~~~l 257 (430)
T 2iyf_A 203 RVDEDVYTFVGACQGDRA---------E----------------EGGWQRPAGAEKVVLVSLGSAFTKQPAFYRECVRAF 257 (430)
T ss_dssp GSCTTTEEECCCCC------------------------------CCCCCCCTTCSEEEEEECTTTCC-CHHHHHHHHHHH
T ss_pred cCCCccEEEeCCcCCCCC---------C----------------CCCCccccCCCCeEEEEcCCCCCCcHHHHHHHHHHH
Confidence 44467 999998653211 0 113554345678999999999865678888999999
Q ss_pred HhC-CCcEEEEEecCCcCCCCCCCCCchhhHhhhcCCCceeeccCHHHHHhcccccccccccCchhHHHHhhcCCceecC
Q 011792 313 VNS-GKGFLWVIRSDLIDGESGVGPVPAELDQGTKERGCIVSWAPQEEVLAHQAIGGFLTHSGWNSTLESMVAGVPMICW 391 (477)
Q Consensus 313 ~~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~~p~~~ll~~~~~~~~I~HGG~gs~~eal~~GvP~l~~ 391 (477)
+.. +.+++|.++.. .....+ +..++|+.+.+|+||.++|+++++ ||||||+||++||+++|+|+|++
T Consensus 258 ~~~~~~~~~~~~G~~---------~~~~~l-~~~~~~v~~~~~~~~~~~l~~ad~--~v~~~G~~t~~Ea~~~G~P~i~~ 325 (430)
T 2iyf_A 258 GNLPGWHLVLQIGRK---------VTPAEL-GELPDNVEVHDWVPQLAILRQADL--FVTHAGAGGSQEGLATATPMIAV 325 (430)
T ss_dssp TTCTTEEEEEECC------------CGGGG-CSCCTTEEEESSCCHHHHHTTCSE--EEECCCHHHHHHHHHTTCCEEEC
T ss_pred hcCCCeEEEEEeCCC---------CChHHh-ccCCCCeEEEecCCHHHHhhccCE--EEECCCccHHHHHHHhCCCEEEC
Confidence 885 77888887432 111111 124679999999999999999888 99999999999999999999999
Q ss_pred CccchhhhhHHHHhhhhceeeecc-CCCCHHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHH
Q 011792 392 PQVGDQQVNSRCVSEIWKIGFDMK-DTCDRSTIEKLVRDLMDNKRDKIMESTVQIAKMARDAVKEGGSSYRNLEKLIEDI 470 (477)
Q Consensus 392 P~~~DQ~~na~rv~~~~G~G~~l~-~~~~~~~l~~~v~~ll~~~~~~~~~~a~~l~~~~~~~~~~gg~~~~~~~~~i~~~ 470 (477)
|...||..|+.++++ .|+|+.+. +.+++++|.++|.++++| +.+++++.++++.+.+. ++ ...+.+.|+++
T Consensus 326 p~~~~q~~~a~~~~~-~g~g~~~~~~~~~~~~l~~~i~~ll~~--~~~~~~~~~~~~~~~~~---~~--~~~~~~~i~~~ 397 (430)
T 2iyf_A 326 PQAVDQFGNADMLQG-LGVARKLATEEATADLLRETALALVDD--PEVARRLRRIQAEMAQE---GG--TRRAADLIEAE 397 (430)
T ss_dssp CCSHHHHHHHHHHHH-TTSEEECCCC-CCHHHHHHHHHHHHHC--HHHHHHHHHHHHHHHHH---CH--HHHHHHHHHTT
T ss_pred CCccchHHHHHHHHH-cCCEEEcCCCCCCHHHHHHHHHHHHcC--HHHHHHHHHHHHHHHhc---Cc--HHHHHHHHHHH
Confidence 999999999999965 79999997 578999999999999998 89999999999988775 43 34455555554
Q ss_pred H
Q 011792 471 R 471 (477)
Q Consensus 471 ~ 471 (477)
.
T Consensus 398 ~ 398 (430)
T 2iyf_A 398 L 398 (430)
T ss_dssp S
T ss_pred h
Confidence 3
No 16
>4fzr_A SSFS6; structural genomics, PSI-biology, protein structure initiati enzyme discovery for natural product biosynthesis, natPro; 2.40A {Streptomyces SP} PDB: 4g2t_A*
Probab=100.00 E-value=5.1e-36 Score=297.61 Aligned_cols=344 Identities=13% Similarity=0.123 Sum_probs=218.2
Q ss_pred CCEEEEEcCCCCCCHHHHHHHHHHHHhCCCeEEEEeCCccchhccCCCcccccccCCCCeEEEeCCCCCC---------C
Q 011792 6 VPHVVLLPFPAYGHIKPMLSLAKLFSHAGFRITFVNTDQYHDRLFGNTDVTAFYKHFPNFLCTSIPDGLP---------P 76 (477)
Q Consensus 6 ~~~il~~~~~~~GHv~p~l~La~~L~~rGH~Vt~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~---------~ 76 (477)
+|||+|++.++.||++|+++|+++|+++||+|++++++.+.+.+... + +.+..++.... .
T Consensus 15 ~MrIl~~~~~~~gh~~~~~~La~~L~~~GheV~v~~~~~~~~~~~~~-G----------~~~~~~~~~~~~~~~~~~~~~ 83 (398)
T 4fzr_A 15 HMRILVIAGCSEGFVMPLVPLSWALRAAGHEVLVAASENMGPTVTGA-G----------LPFAPTCPSLDMPEVLSWDRE 83 (398)
T ss_dssp CCEEEEECCSSHHHHGGGHHHHHHHHHTTCEEEEEEEGGGHHHHHHT-T----------CCEEEEESSCCHHHHHSBCTT
T ss_pred ceEEEEEcCCCcchHHHHHHHHHHHHHCCCEEEEEcCHHHHHHHHhC-C----------CeeEecCCccchHhhhhhhcc
Confidence 69999999999999999999999999999999999987766665542 2 44455442100 0
Q ss_pred CCCC-CCCChH-------HHHHhhchhcHHHHHHHHhcCCCCCeEEEECCCcchHHHHHHHcCCCeEEEccCchhhHHHH
Q 011792 77 DNPR-FGIYTK-------DWFCSNKPVSKLAFRQLLMTPGRLPTCIISDSIMSFAIDVAEELNIPIITFRPYSAYCSWSD 148 (477)
Q Consensus 77 ~~~~-~~~~~~-------~~~~~~~~~~~~~l~~~l~~~~~~~D~vI~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~ 148 (477)
.... ...... ..+..........+.+++++. +||+|++|...+++..+|+.+|||++.+...........
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~--~pDlVv~d~~~~~~~~~a~~~giP~v~~~~~~~~~~~~~ 161 (398)
T 4fzr_A 84 GNRTTMPREEKPLLEHIGRGYGRLVLRMRDEALALAERW--KPDLVLTETYSLTGPLVAATLGIPWIEQSIRLASPELIK 161 (398)
T ss_dssp SCBCCCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--CCSEEEEETTCTHHHHHHHHHTCCEEEECCSSCCCHHHH
T ss_pred CcccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHhC--CCCEEEECccccHHHHHHHhhCCCEEEeccCCCCchhhh
Confidence 0000 000111 111222222334566666665 899999998888899999999999998765543211100
Q ss_pred hhhhhhhhcCCCCCCCCCCCCCceecCCCCCCCCCCCCCccccCCCCCChHHHHHHHhhhcccCCceEEEcChhhhchHH
Q 011792 149 FHFSKLAEEGELPVTDENFDKPVTCIPELENIFRNRDLPSICRHGGPDDPILQTFIRDTSATTRTSALVINTFNEIEGPI 228 (477)
Q Consensus 149 ~~~~~~~~~~~~p~~~~~~~~~~~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ns~~~le~p~ 228 (477)
.... .++... +....+ ......+..+....+.+..+.
T Consensus 162 ~~~~-------------------~~l~~~---~~~~~~---------------------~~~~~~~~~~~~~~~~~~~~~ 198 (398)
T 4fzr_A 162 SAGV-------------------GELAPE---LAELGL---------------------TDFPDPLLSIDVCPPSMEAQP 198 (398)
T ss_dssp HHHH-------------------HHTHHH---HHTTTC---------------------SSCCCCSEEEECSCGGGC---
T ss_pred HHHH-------------------HHHHHH---HHHcCC---------------------CCCCCCCeEEEeCChhhCCCC
Confidence 0000 000000 000000 001222444555544444331
Q ss_pred HHHhhhcCCceeEeCccccccccccccccccCCCCccCcccCccccccccccccCCCCCcEEEEEecCcccC--------
Q 011792 229 ISKLGSRLTKIYTVGPLHALLKSRIQEDSVESSPLESNNCVLSKEDRSCMTWLGSQPSRSVLYVSFGSFIKL-------- 300 (477)
Q Consensus 229 l~~~~~~~p~~~~vG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~Gs~~~~-------- 300 (477)
......+.++++.. ...++.+|+...+++++||+++||....
T Consensus 199 ----~~~~~~~~~~~~~~--------------------------~~~~~~~~~~~~~~~~~v~v~~G~~~~~~~~~~~~~ 248 (398)
T 4fzr_A 199 ----KPGTTKMRYVPYNG--------------------------RNDQVPSWVFEERKQPRLCLTFGTRVPLPNTNTIPG 248 (398)
T ss_dssp -----CCCEECCCCCCCC--------------------------SSCCCCHHHHSCCSSCEEECC---------------
T ss_pred ----CCCCCCeeeeCCCC--------------------------CCCCCchhhhcCCCCCEEEEEccCcccccccccccc
Confidence 00000112222110 1112335665445778999999999743
Q ss_pred CHHHHHHHHHHHHhCCCcEEEEEecCCcCCCCCCCCCchhhHhhhcCCCceeeccCHHHHHhcccccccccccCchhHHH
Q 011792 301 SGDQILEFWHGIVNSGKGFLWVIRSDLIDGESGVGPVPAELDQGTKERGCIVSWAPQEEVLAHQAIGGFLTHSGWNSTLE 380 (477)
Q Consensus 301 ~~~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~~p~~~ll~~~~~~~~I~HGG~gs~~e 380 (477)
....+..+++++...+.++||+.++.. ...+ +..++|+++.+|+|+.++|+++++ ||||||.||+.|
T Consensus 249 ~~~~~~~~~~al~~~~~~~v~~~~~~~----------~~~l-~~~~~~v~~~~~~~~~~ll~~ad~--~v~~gG~~t~~E 315 (398)
T 4fzr_A 249 GLSLLQALSQELPKLGFEVVVAVSDKL----------AQTL-QPLPEGVLAAGQFPLSAIMPACDV--VVHHGGHGTTLT 315 (398)
T ss_dssp -CCSHHHHHHHGGGGTCEEEECCCC-------------------CCTTEEEESCCCHHHHGGGCSE--EEECCCHHHHHH
T ss_pred hHHHHHHHHHHHHhCCCEEEEEeCCcc----------hhhh-ccCCCcEEEeCcCCHHHHHhhCCE--EEecCCHHHHHH
Confidence 345688899999988999999885421 1111 125789999999999999999888 999999999999
Q ss_pred HhhcCCceecCCccchhhhhHHHHhhhhceeeecc-CCCCHHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHH
Q 011792 381 SMVAGVPMICWPQVGDQQVNSRCVSEIWKIGFDMK-DTCDRSTIEKLVRDLMDNKRDKIMESTVQIAKMARD 451 (477)
Q Consensus 381 al~~GvP~l~~P~~~DQ~~na~rv~~~~G~G~~l~-~~~~~~~l~~~v~~ll~~~~~~~~~~a~~l~~~~~~ 451 (477)
|+++|+|+|++|...||..|+.++++ .|+|+.++ ++++++.|.++|.++|+| +.++++++++++.+.+
T Consensus 316 a~~~G~P~v~~p~~~~q~~~a~~~~~-~g~g~~~~~~~~~~~~l~~ai~~ll~~--~~~~~~~~~~~~~~~~ 384 (398)
T 4fzr_A 316 CLSEGVPQVSVPVIAEVWDSARLLHA-AGAGVEVPWEQAGVESVLAACARIRDD--SSYVGNARRLAAEMAT 384 (398)
T ss_dssp HHHTTCCEEECCCSGGGHHHHHHHHH-TTSEEECC-------CHHHHHHHHHHC--THHHHHHHHHHHHHTT
T ss_pred HHHhCCCEEecCCchhHHHHHHHHHH-cCCEEecCcccCCHHHHHHHHHHHHhC--HHHHHHHHHHHHHHHc
Confidence 99999999999999999999999965 79999998 678999999999999999 9999999999999876
No 17
>3oti_A CALG3; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD C0T; 1.60A {Micromonospora echinospora} PDB: 3d0q_A* 3d0r_A*
Probab=100.00 E-value=1.3e-34 Score=287.38 Aligned_cols=352 Identities=13% Similarity=0.094 Sum_probs=239.6
Q ss_pred CCEEEEEcCCCCCCHHHHHHHHHHHHhCCCeEEEEeCCccchhccCCCcccccccCCCCeEEEeCCCCCCC---------
Q 011792 6 VPHVVLLPFPAYGHIKPMLSLAKLFSHAGFRITFVNTDQYHDRLFGNTDVTAFYKHFPNFLCTSIPDGLPP--------- 76 (477)
Q Consensus 6 ~~~il~~~~~~~GHv~p~l~La~~L~~rGH~Vt~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~--------- 76 (477)
.|||+|++.++.||++|+++||++|+++||+|+++++ .+.+.+.. .+ +.+..++.....
T Consensus 20 ~MrIl~~~~~~~Ghv~~~~~La~~L~~~GheV~v~~~-~~~~~~~~-~G----------~~~~~~~~~~~~~~~~~~~~~ 87 (398)
T 3oti_A 20 HMRVLFVSSPGIGHLFPLIQLAWGFRTAGHDVLIAVA-EHADRAAA-AG----------LEVVDVAPDYSAVKVFEQVAK 87 (398)
T ss_dssp CCEEEEECCSSHHHHGGGHHHHHHHHHTTCEEEEEES-SCHHHHHT-TT----------CEEEESSTTCCHHHHHHHHHH
T ss_pred cCEEEEEcCCCcchHhHHHHHHHHHHHCCCEEEEecc-chHHHHHh-CC----------CeeEecCCccCHHHHhhhccc
Confidence 4899999999999999999999999999999999999 76666554 33 777777632110
Q ss_pred -----------CCCCCCCChHHHHHhhchhcHHHHHHHHhcCCCCCeEEEECCCcchHHHHHHHcCCCeEEEccCchhhH
Q 011792 77 -----------DNPRFGIYTKDWFCSNKPVSKLAFRQLLMTPGRLPTCIISDSIMSFAIDVAEELNIPIITFRPYSAYCS 145 (477)
Q Consensus 77 -----------~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~D~vI~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~ 145 (477)
...........++..........+.+++++. +||+||+|...+++..+|+.+|||++.+........
T Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~--~pDlVv~d~~~~~~~~aA~~~giP~v~~~~~~~~~~ 165 (398)
T 3oti_A 88 DNPRFAETVATRPAIDLEEWGVQIAAVNRPLVDGTMALVDDY--RPDLVVYEQGATVGLLAADRAGVPAVQRNQSAWRTR 165 (398)
T ss_dssp HCHHHHHTGGGSCCCSGGGGHHHHHHHHGGGHHHHHHHHHHH--CCSEEEEETTCHHHHHHHHHHTCCEEEECCTTCCCT
T ss_pred CCccccccccCChhhhHHHHHHHHHHHHHHHHHHHHHHHHHc--CCCEEEECchhhHHHHHHHHcCCCEEEEeccCCCcc
Confidence 0001112223333444444566777888776 899999998888899999999999998654321110
Q ss_pred HHHhhhhhhhhcCCCCCCCCCCCCCceecCCCCCCCCCCCCCccccCCCCCChHHHHHHHhhhcccCCceEEEcChhhhc
Q 011792 146 WSDFHFSKLAEEGELPVTDENFDKPVTCIPELENIFRNRDLPSICRHGGPDDPILQTFIRDTSATTRTSALVINTFNEIE 225 (477)
Q Consensus 146 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ns~~~le 225 (477)
.. ... ....+ ..............+..+....+.+.
T Consensus 166 ~~----~~~------------------~~~~l----------------------~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 (398)
T 3oti_A 166 GM----HRS------------------IASFL----------------------TDLMDKHQVSLPEPVATIESFPPSLL 201 (398)
T ss_dssp TH----HHH------------------HHTTC----------------------HHHHHHTTCCCCCCSEEECSSCGGGG
T ss_pred ch----hhH------------------HHHHH----------------------HHHHHHcCCCCCCCCeEEEeCCHHHC
Confidence 00 000 00000 00000000001223444544444443
Q ss_pred hHHHHHhhhcCCceeEeCccccccccccccccccCCCCccCcccCccccccccccccCCCCCcEEEEEecCcccC--CHH
Q 011792 226 GPIISKLGSRLTKIYTVGPLHALLKSRIQEDSVESSPLESNNCVLSKEDRSCMTWLGSQPSRSVLYVSFGSFIKL--SGD 303 (477)
Q Consensus 226 ~p~l~~~~~~~p~~~~vG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~Gs~~~~--~~~ 303 (477)
.+. ......+.++. .. ....+.+|+...+++++||+++||.... ..+
T Consensus 202 ~~~----~~~~~~~~~~~-~~--------------------------~~~~~~~~~~~~~~~~~v~v~~G~~~~~~~~~~ 250 (398)
T 3oti_A 202 LEA----EPEGWFMRWVP-YG--------------------------GGAVLGDRLPPVPARPEVAITMGTIELQAFGIG 250 (398)
T ss_dssp TTS----CCCSBCCCCCC-CC--------------------------CCEECCSSCCCCCSSCEEEECCTTTHHHHHCGG
T ss_pred CCC----CCCCCCccccC-CC--------------------------CCcCCchhhhcCCCCCEEEEEcCCCccccCcHH
Confidence 320 00000111110 00 0111234666556788999999999652 567
Q ss_pred HHHHHHHHHHhCCCcEEEEEecCCcCCCCCCCCCchhhHhhhcCCCceeeccCHHHHHhcccccccccccCchhHHHHhh
Q 011792 304 QILEFWHGIVNSGKGFLWVIRSDLIDGESGVGPVPAELDQGTKERGCIVSWAPQEEVLAHQAIGGFLTHSGWNSTLESMV 383 (477)
Q Consensus 304 ~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~~p~~~ll~~~~~~~~I~HGG~gs~~eal~ 383 (477)
.+..++++++..+.++||+.++.. ...+ +..++|+.+.+|+|+.++|+++++ ||||||.||+.||++
T Consensus 251 ~~~~~~~~l~~~~~~~v~~~g~~~----------~~~l-~~~~~~v~~~~~~~~~~ll~~ad~--~v~~~G~~t~~Eal~ 317 (398)
T 3oti_A 251 AVEPIIAAAGEVDADFVLALGDLD----------ISPL-GTLPRNVRAVGWTPLHTLLRTCTA--VVHHGGGGTVMTAID 317 (398)
T ss_dssp GHHHHHHHHHTSSSEEEEECTTSC----------CGGG-CSCCTTEEEESSCCHHHHHTTCSE--EEECCCHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCEEEEEECCcC----------hhhh-ccCCCcEEEEccCCHHHHHhhCCE--EEECCCHHHHHHHHH
Confidence 788899999998999999985431 1111 125689999999999999999887 999999999999999
Q ss_pred cCCceecCCccchhhhhH--HHHhhhhceeeecc-CCCCHHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHHHHHcCCChH
Q 011792 384 AGVPMICWPQVGDQQVNS--RCVSEIWKIGFDMK-DTCDRSTIEKLVRDLMDNKRDKIMESTVQIAKMARDAVKEGGSSY 460 (477)
Q Consensus 384 ~GvP~l~~P~~~DQ~~na--~rv~~~~G~G~~l~-~~~~~~~l~~~v~~ll~~~~~~~~~~a~~l~~~~~~~~~~gg~~~ 460 (477)
+|+|+|++|+..||..|| .++++ .|+|+.++ .+.+++.|. ++|+| +.++++++++++.+.+. .+ .
T Consensus 318 ~G~P~v~~p~~~dq~~~a~~~~~~~-~g~g~~~~~~~~~~~~l~----~ll~~--~~~~~~~~~~~~~~~~~---~~--~ 385 (398)
T 3oti_A 318 AGIPQLLAPDPRDQFQHTAREAVSR-RGIGLVSTSDKVDADLLR----RLIGD--ESLRTAAREVREEMVAL---PT--P 385 (398)
T ss_dssp HTCCEEECCCTTCCSSCTTHHHHHH-HTSEEECCGGGCCHHHHH----HHHHC--HHHHHHHHHHHHHHHTS---CC--H
T ss_pred hCCCEEEcCCCchhHHHHHHHHHHH-CCCEEeeCCCCCCHHHHH----HHHcC--HHHHHHHHHHHHHHHhC---CC--H
Confidence 999999999999999999 99965 89999998 577887777 78888 99999999999999763 43 5
Q ss_pred HHHHHHHHHHH
Q 011792 461 RNLEKLIEDIR 471 (477)
Q Consensus 461 ~~~~~~i~~~~ 471 (477)
..+.+.|+++.
T Consensus 386 ~~~~~~l~~l~ 396 (398)
T 3oti_A 386 AETVRRIVERI 396 (398)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHh
Confidence 56667777664
No 18
>3tsa_A SPNG, NDP-rhamnosyltransferase; glycosyltransferase; HET: GLC; 1.70A {Saccharopolyspora spinosa} PDB: 3uyk_A* 3uyl_A*
Probab=100.00 E-value=3.6e-34 Score=283.62 Aligned_cols=357 Identities=11% Similarity=0.160 Sum_probs=235.7
Q ss_pred CCEEEEEcCCCCCCHHHHHHHHHHHHhCCCeEEEEeCCccchhccCCCcccccccCCCCeEEEeC-CCCCC---------
Q 011792 6 VPHVVLLPFPAYGHIKPMLSLAKLFSHAGFRITFVNTDQYHDRLFGNTDVTAFYKHFPNFLCTSI-PDGLP--------- 75 (477)
Q Consensus 6 ~~~il~~~~~~~GHv~p~l~La~~L~~rGH~Vt~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l-~~~~~--------- 75 (477)
+|||+|++.++.||++|+++|+++|+++||+|++++++.+.+.+... + +.+..+ +....
T Consensus 1 ~MrIl~~~~~~~gh~~~~~~la~~L~~~GheV~v~~~~~~~~~~~~~-g----------~~~~~~~~~~~~~~~~~~~~~ 69 (391)
T 3tsa_A 1 HMRVLVVPLPYPTHLMAMVPLCWALQASGHEVLIAAPPELQATAHGA-G----------LTTAGIRGNDRTGDTGGTTQL 69 (391)
T ss_dssp CCEEEEECCSCHHHHHTTHHHHHHHHHTTCEEEEEECHHHHHHHHHB-T----------CEEEEC--------------C
T ss_pred CcEEEEEcCCCcchhhhHHHHHHHHHHCCCEEEEecChhhHHHHHhC-C----------CceeeecCCccchhhhhhhcc
Confidence 48999999999999999999999999999999999987665555442 2 455555 21110
Q ss_pred -CCCC----CCCCChHHHHHhhchhc-------HHHHHHHHhcCCCCCeEEEECCCcchHHHHHHHcCCCeEEEccCchh
Q 011792 76 -PDNP----RFGIYTKDWFCSNKPVS-------KLAFRQLLMTPGRLPTCIISDSIMSFAIDVAEELNIPIITFRPYSAY 143 (477)
Q Consensus 76 -~~~~----~~~~~~~~~~~~~~~~~-------~~~l~~~l~~~~~~~D~vI~D~~~~~~~~~A~~lgiP~v~~~~~~~~ 143 (477)
.... .........+....... ...+.+++++. +||+||+|...+++..+|+.+|||++.+......
T Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~--~PD~Vv~~~~~~~~~~aa~~~giP~v~~~~~~~~ 147 (391)
T 3tsa_A 70 RFPNPAFGQRDTEAGRQLWEQTASNVAQSSLDQLPEYLRLAEAW--RPSVLLVDVCALIGRVLGGLLDLPVVLHRWGVDP 147 (391)
T ss_dssp CSCCGGGGCTTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--CCSEEEEETTCHHHHHHHHHTTCCEEEECCSCCC
T ss_pred cccccccccccchhHHHHHHHHHHHHhhcchhhHHHHHHHHHhc--CCCEEEeCcchhHHHHHHHHhCCCEEEEecCCcc
Confidence 0000 00001112222222223 45566777766 9999999987778899999999999997644322
Q ss_pred hHHHHhhhhhhhhcCCCCCCCCCCCCCceecCCCCCCCCCCCCCccccCCCCCChHHHHHHHhh--hcccCCceEEEcCh
Q 011792 144 CSWSDFHFSKLAEEGELPVTDENFDKPVTCIPELENIFRNRDLPSICRHGGPDDPILQTFIRDT--SATTRTSALVINTF 221 (477)
Q Consensus 144 ~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~ns~ 221 (477)
...... +. . ........... ......+..+....
T Consensus 148 ~~~~~~--~~-----------------------~-------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (391)
T 3tsa_A 148 TAGPFS--DR-----------------------A-------------------HELLDPVCRHHGLTGLPTPELILDPCP 183 (391)
T ss_dssp TTTHHH--HH-----------------------H-------------------HHHHHHHHHHTTSSSSCCCSEEEECSC
T ss_pred cccccc--ch-----------------------H-------------------HHHHHHHHHHcCCCCCCCCceEEEecC
Confidence 100000 00 0 00000000000 00112245555555
Q ss_pred hhhchHHHHHhhh-cCCceeEeCccccccccccccccccCCCCccCcccCccccccccccccCCCCCcEEEEEecCccc-
Q 011792 222 NEIEGPIISKLGS-RLTKIYTVGPLHALLKSRIQEDSVESSPLESNNCVLSKEDRSCMTWLGSQPSRSVLYVSFGSFIK- 299 (477)
Q Consensus 222 ~~le~p~l~~~~~-~~p~~~~vG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~Gs~~~- 299 (477)
++++.+ .. ....+.+++ .. ....+..|+...+++++|++++||...
T Consensus 184 ~~~~~~-----~~~~~~~~~~~p-~~--------------------------~~~~~~~~~~~~~~~~~vlv~~G~~~~~ 231 (391)
T 3tsa_A 184 PSLQAS-----DAPQGAPVQYVP-YN--------------------------GSGAFPAWGAARTSARRVCICMGRMVLN 231 (391)
T ss_dssp GGGSCT-----TSCCCEECCCCC-CC--------------------------CCEECCGGGSSCCSSEEEEEECCHHHHH
T ss_pred hhhcCC-----CCCccCCeeeec-CC--------------------------CCcCCCchhhcCCCCCEEEEEcCCCCCc
Confidence 544433 11 001122321 10 011122476655677999999999853
Q ss_pred -CC-HHHHHHHHHHHHhC-CCcEEEEEecCCcCCCCCCCCCchhhHhhhcCCCceeeccCHHHHHhcccccccccccCch
Q 011792 300 -LS-GDQILEFWHGIVNS-GKGFLWVIRSDLIDGESGVGPVPAELDQGTKERGCIVSWAPQEEVLAHQAIGGFLTHSGWN 376 (477)
Q Consensus 300 -~~-~~~~~~~~~a~~~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~~p~~~ll~~~~~~~~I~HGG~g 376 (477)
.. ..++..++++ +.. +.+++|..++.... .+. ..++|+.+.+|+|+.++|+++++ ||||||.|
T Consensus 232 ~~~~~~~~~~~~~~-~~~p~~~~v~~~~~~~~~------~l~-----~~~~~v~~~~~~~~~~ll~~ad~--~v~~~G~~ 297 (391)
T 3tsa_A 232 ATGPAPLLRAVAAA-TELPGVEAVIAVPPEHRA------LLT-----DLPDNARIAESVPLNLFLRTCEL--VICAGGSG 297 (391)
T ss_dssp HHCSHHHHHHHHHH-HTSTTEEEEEECCGGGGG------GCT-----TCCTTEEECCSCCGGGTGGGCSE--EEECCCHH
T ss_pred ccchHHHHHHHHHh-ccCCCeEEEEEECCcchh------hcc-----cCCCCEEEeccCCHHHHHhhCCE--EEeCCCHH
Confidence 34 7888899998 877 67888887543111 111 24679999999999999988887 99999999
Q ss_pred hHHHHhhcCCceecCCccchhhhhHHHHhhhhceeeeccC---CCCHHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHHHH
Q 011792 377 STLESMVAGVPMICWPQVGDQQVNSRCVSEIWKIGFDMKD---TCDRSTIEKLVRDLMDNKRDKIMESTVQIAKMARDAV 453 (477)
Q Consensus 377 s~~eal~~GvP~l~~P~~~DQ~~na~rv~~~~G~G~~l~~---~~~~~~l~~~v~~ll~~~~~~~~~~a~~l~~~~~~~~ 453 (477)
|++||+++|+|+|++|...||..|+.++++ .|+|..+.. ..+++.|.+++.++|+| ++++++++++++.+.+.
T Consensus 298 t~~Ea~~~G~P~v~~p~~~~q~~~a~~~~~-~g~g~~~~~~~~~~~~~~l~~ai~~ll~~--~~~~~~~~~~~~~~~~~- 373 (391)
T 3tsa_A 298 TAFTATRLGIPQLVLPQYFDQFDYARNLAA-AGAGICLPDEQAQSDHEQFTDSIATVLGD--TGFAAAAIKLSDEITAM- 373 (391)
T ss_dssp HHHHHHHTTCCEEECCCSTTHHHHHHHHHH-TTSEEECCSHHHHTCHHHHHHHHHHHHTC--THHHHHHHHHHHHHHTS-
T ss_pred HHHHHHHhCCCEEecCCcccHHHHHHHHHH-cCCEEecCcccccCCHHHHHHHHHHHHcC--HHHHHHHHHHHHHHHcC-
Confidence 999999999999999999999999999965 799999963 48999999999999999 99999999999998763
Q ss_pred HcCCChHHHHHHHHHHHHHh
Q 011792 454 KEGGSSYRNLEKLIEDIRLM 473 (477)
Q Consensus 454 ~~gg~~~~~~~~~i~~~~~~ 473 (477)
++ ...+.+.|+++...
T Consensus 374 --~~--~~~~~~~i~~~~~~ 389 (391)
T 3tsa_A 374 --PH--PAALVRTLENTAAI 389 (391)
T ss_dssp --CC--HHHHHHHHHHC---
T ss_pred --CC--HHHHHHHHHHHHhc
Confidence 33 45667777776553
No 19
>3otg_A CALG1; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD; 2.08A {Micromonospora echinospora} PDB: 3oth_A*
Probab=100.00 E-value=9.6e-31 Score=260.75 Aligned_cols=368 Identities=15% Similarity=0.157 Sum_probs=244.0
Q ss_pred CCEEEEEcCCCCCCHHHHHHHHHHHHhCCCeEEEEeCCccchhccCCCcccccccCCCCeEEEeCCCC------------
Q 011792 6 VPHVVLLPFPAYGHIKPMLSLAKLFSHAGFRITFVNTDQYHDRLFGNTDVTAFYKHFPNFLCTSIPDG------------ 73 (477)
Q Consensus 6 ~~~il~~~~~~~GHv~p~l~La~~L~~rGH~Vt~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~------------ 73 (477)
+|||++++.++.||++|+++|+++|+++||+|++++++.+.+.+.. .+ +.+..++..
T Consensus 20 ~MrIl~~~~~~~Gh~~~~~~la~~L~~~GheV~v~~~~~~~~~~~~-~g----------~~~~~~~~~~~~~~~~~~~~~ 88 (412)
T 3otg_A 20 HMRVLFASLGTHGHTYPLLPLATAARAAGHEVTFATGEGFAGTLRK-LG----------FEPVATGMPVFDGFLAALRIR 88 (412)
T ss_dssp SCEEEEECCSSHHHHGGGHHHHHHHHHTTCEEEEEECGGGHHHHHH-TT----------CEEEECCCCHHHHHHHHHHHH
T ss_pred eeEEEEEcCCCcccHHHHHHHHHHHHHCCCEEEEEccHHHHHHHHh-cC----------CceeecCcccccchhhhhhhh
Confidence 6999999999999999999999999999999999999765444433 22 677777630
Q ss_pred -----CCCCC-CCCCCChHHHHHhh-chhcHHHHHHHHhcCCCCCeEEEECCCcchHHHHHHHcCCCeEEEccCchhhHH
Q 011792 74 -----LPPDN-PRFGIYTKDWFCSN-KPVSKLAFRQLLMTPGRLPTCIISDSIMSFAIDVAEELNIPIITFRPYSAYCSW 146 (477)
Q Consensus 74 -----~~~~~-~~~~~~~~~~~~~~-~~~~~~~l~~~l~~~~~~~D~vI~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~ 146 (477)
.+... ..........+... .......+.+++++. +||+||+|....++..+|+.+|||+|.+.........
T Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~--~pDvVv~~~~~~~~~~aa~~~giP~v~~~~~~~~~~~ 166 (412)
T 3otg_A 89 FDTDSPEGLTPEQLSELPQIVFGRVIPQRVFDELQPVIERL--RPDLVVQEISNYGAGLAALKAGIPTICHGVGRDTPDD 166 (412)
T ss_dssp HSCSCCTTCCHHHHTTSHHHHHHTHHHHHHHHHHHHHHHHH--CCSEEEEETTCHHHHHHHHHHTCCEEEECCSCCCCSH
T ss_pred hcccCCccCChhHhhHHHHHHHhccchHHHHHHHHHHHHhc--CCCEEEECchhhHHHHHHHHcCCCEEEecccccCchh
Confidence 00000 00011222222222 222335667777766 9999999987778889999999999986554321100
Q ss_pred HHhhhhhhhhcCCCCCCCCCCCCCceecCCCCCCCCCCCCCccccCCCCCChHHHHHHHhhhcccCCceEEEcChhhhch
Q 011792 147 SDFHFSKLAEEGELPVTDENFDKPVTCIPELENIFRNRDLPSICRHGGPDDPILQTFIRDTSATTRTSALVINTFNEIEG 226 (477)
Q Consensus 147 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ns~~~le~ 226 (477)
....+..... ......++.. ... .....++.+++.+..+++.
T Consensus 167 ~~~~~~~~~~-------------~~~~~~g~~~------~~~-------------------~~~~~~d~~i~~~~~~~~~ 208 (412)
T 3otg_A 167 LTRSIEEEVR-------------GLAQRLGLDL------PPG-------------------RIDGFGNPFIDIFPPSLQE 208 (412)
T ss_dssp HHHHHHHHHH-------------HHHHHTTCCC------CSS-------------------CCGGGGCCEEECSCGGGSC
T ss_pred hhHHHHHHHH-------------HHHHHcCCCC------Ccc-------------------cccCCCCeEEeeCCHHhcC
Confidence 0000000000 0000000000 000 0013455666666666554
Q ss_pred HHHHHhhhcCCceeEeCccccccccccccccccCCCCccCcccCcccccccccc-ccCCCCCcEEEEEecCcccCCHHHH
Q 011792 227 PIISKLGSRLTKIYTVGPLHALLKSRIQEDSVESSPLESNNCVLSKEDRSCMTW-LGSQPSRSVLYVSFGSFIKLSGDQI 305 (477)
Q Consensus 227 p~l~~~~~~~p~~~~vG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-l~~~~~~~~v~vs~Gs~~~~~~~~~ 305 (477)
+. .........+-+... .......+| ....+++++|++++||......+.+
T Consensus 209 ~~----~~~~~~~~~~~~~~~------------------------~~~~~~~~~~~~~~~~~~~vlv~~G~~~~~~~~~~ 260 (412)
T 3otg_A 209 PE----FRARPRRHELRPVPF------------------------AEQGDLPAWLSSRDTARPLVYLTLGTSSGGTVEVL 260 (412)
T ss_dssp HH----HHTCTTEEECCCCCC------------------------CCCCCCCGGGGGSCTTSCEEEEECTTTTCSCHHHH
T ss_pred Cc----ccCCCCcceeeccCC------------------------CCCCCCCCccccccCCCCEEEEEcCCCCcCcHHHH
Confidence 42 111111111111000 001112345 2223577899999999986778889
Q ss_pred HHHHHHHHhCCCcEEEEEecCCcCCCCCCCCCchhhHhhhcCCCceeeccCHHHHHhcccccccccccCchhHHHHhhcC
Q 011792 306 LEFWHGIVNSGKGFLWVIRSDLIDGESGVGPVPAELDQGTKERGCIVSWAPQEEVLAHQAIGGFLTHSGWNSTLESMVAG 385 (477)
Q Consensus 306 ~~~~~a~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~~p~~~ll~~~~~~~~I~HGG~gs~~eal~~G 385 (477)
..++++++..+.+++|..+..... +.+. ..++|+.+.+|+|+..+|+++++ ||+|||.||++||+++|
T Consensus 261 ~~~~~~l~~~~~~~~~~~g~~~~~-----~~l~-----~~~~~v~~~~~~~~~~~l~~ad~--~v~~~g~~t~~Ea~a~G 328 (412)
T 3otg_A 261 RAAIDGLAGLDADVLVASGPSLDV-----SGLG-----EVPANVRLESWVPQAALLPHVDL--VVHHGGSGTTLGALGAG 328 (412)
T ss_dssp HHHHHHHHTSSSEEEEECCSSCCC-----TTCC-----CCCTTEEEESCCCHHHHGGGCSE--EEESCCHHHHHHHHHHT
T ss_pred HHHHHHHHcCCCEEEEEECCCCCh-----hhhc-----cCCCcEEEeCCCCHHHHHhcCcE--EEECCchHHHHHHHHhC
Confidence 999999998888999988543211 1121 14679999999999999999888 99999999999999999
Q ss_pred CceecCCccchhhhhHHHHhhhhceeeecc-CCCCHHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHHHHHcCCChHHHHH
Q 011792 386 VPMICWPQVGDQQVNSRCVSEIWKIGFDMK-DTCDRSTIEKLVRDLMDNKRDKIMESTVQIAKMARDAVKEGGSSYRNLE 464 (477)
Q Consensus 386 vP~l~~P~~~DQ~~na~rv~~~~G~G~~l~-~~~~~~~l~~~v~~ll~~~~~~~~~~a~~l~~~~~~~~~~gg~~~~~~~ 464 (477)
+|+|++|...||..|+..+.+ .|+|..+. .+++++.|.+++.++|+| +++++++.+.++.+.+. + + ...+.
T Consensus 329 ~P~v~~p~~~~q~~~~~~v~~-~g~g~~~~~~~~~~~~l~~ai~~ll~~--~~~~~~~~~~~~~~~~~---~-~-~~~~~ 400 (412)
T 3otg_A 329 VPQLSFPWAGDSFANAQAVAQ-AGAGDHLLPDNISPDSVSGAAKRLLAE--ESYRAGARAVAAEIAAM---P-G-PDEVV 400 (412)
T ss_dssp CCEEECCCSTTHHHHHHHHHH-HTSEEECCGGGCCHHHHHHHHHHHHHC--HHHHHHHHHHHHHHHHS---C-C-HHHHH
T ss_pred CCEEecCCchhHHHHHHHHHH-cCCEEecCcccCCHHHHHHHHHHHHhC--HHHHHHHHHHHHHHhcC---C-C-HHHHH
Confidence 999999999999999999965 79999998 578999999999999999 99999999999888763 3 3 45566
Q ss_pred HHHHHHHH
Q 011792 465 KLIEDIRL 472 (477)
Q Consensus 465 ~~i~~~~~ 472 (477)
+.++++..
T Consensus 401 ~~~~~l~~ 408 (412)
T 3otg_A 401 RLLPGFAS 408 (412)
T ss_dssp TTHHHHHC
T ss_pred HHHHHHhc
Confidence 66666654
No 20
>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa}
Probab=99.96 E-value=9.7e-28 Score=234.43 Aligned_cols=340 Identities=13% Similarity=0.089 Sum_probs=204.8
Q ss_pred CCEEEEEcCCCCCCHHHHHHHHHHHHhCCCeEEEEeCCcc-chhccCCCcccccccCCCCeEEEeCCC-CCCCCC-CCCC
Q 011792 6 VPHVVLLPFPAYGHIKPMLSLAKLFSHAGFRITFVNTDQY-HDRLFGNTDVTAFYKHFPNFLCTSIPD-GLPPDN-PRFG 82 (477)
Q Consensus 6 ~~~il~~~~~~~GHv~p~l~La~~L~~rGH~Vt~~~~~~~-~~~l~~~~~~~~~~~~~~~~~~~~l~~-~~~~~~-~~~~ 82 (477)
+.||+|...|+-||++|.++||++|+++||+|+|+++... ...+.+..+ +++..++. +++... ....
T Consensus 2 ~~~i~i~~GGTgGHi~palala~~L~~~g~~V~~vg~~~g~e~~~v~~~g----------~~~~~i~~~~~~~~~~~~~~ 71 (365)
T 3s2u_A 2 KGNVLIMAGGTGGHVFPALACAREFQARGYAVHWLGTPRGIENDLVPKAG----------LPLHLIQVSGLRGKGLKSLV 71 (365)
T ss_dssp -CEEEEECCSSHHHHHHHHHHHHHHHHTTCEEEEEECSSSTHHHHTGGGT----------CCEEECC-------------
T ss_pred CCcEEEEcCCCHHHHHHHHHHHHHHHhCCCEEEEEECCchHhhchhhhcC----------CcEEEEECCCcCCCCHHHHH
Confidence 4689998888779999999999999999999999987532 233333233 66666652 222111 0011
Q ss_pred CChHHHHHhhchhcHHHHHHHHhcCCCCCeEEEECCCcc--hHHHHHHHcCCCeEEEccCchhhHHHHhhhhhhhhcCCC
Q 011792 83 IYTKDWFCSNKPVSKLAFRQLLMTPGRLPTCIISDSIMS--FAIDVAEELNIPIITFRPYSAYCSWSDFHFSKLAEEGEL 160 (477)
Q Consensus 83 ~~~~~~~~~~~~~~~~~l~~~l~~~~~~~D~vI~D~~~~--~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (477)
.....++..+ .....++++. +||+||++.... .+..+|+.+|||++..-..
T Consensus 72 ~~~~~~~~~~-----~~~~~~l~~~--~PDvVi~~g~~~s~p~~laA~~~~iP~vihe~n-------------------- 124 (365)
T 3s2u_A 72 KAPLELLKSL-----FQALRVIRQL--RPVCVLGLGGYVTGPGGLAARLNGVPLVIHEQN-------------------- 124 (365)
T ss_dssp -CHHHHHHHH-----HHHHHHHHHH--CCSEEEECSSSTHHHHHHHHHHTTCCEEEEECS--------------------
T ss_pred HHHHHHHHHH-----HHHHHHHHhc--CCCEEEEcCCcchHHHHHHHHHcCCCEEEEecc--------------------
Confidence 1222222222 2345666666 999999997665 4567899999999863110
Q ss_pred CCCCCCCCCCceecCCCCCCCCCCCCCccccCCCCCChHHHHHHHhhhcccCCceEEEcChhhhchHHHHHhhhcCCcee
Q 011792 161 PVTDENFDKPVTCIPELENIFRNRDLPSICRHGGPDDPILQTFIRDTSATTRTSALVINTFNEIEGPIISKLGSRLTKIY 240 (477)
Q Consensus 161 p~~~~~~~~~~~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ns~~~le~p~l~~~~~~~p~~~ 240 (477)
..+++.| .+.. ..++.++. ++++.. +...+++
T Consensus 125 ------------~~~G~~n----------------------r~l~-----~~a~~v~~-~~~~~~--------~~~~k~~ 156 (365)
T 3s2u_A 125 ------------AVAGTAN----------------------RSLA-----PIARRVCE-AFPDTF--------PASDKRL 156 (365)
T ss_dssp ------------SSCCHHH----------------------HHHG-----GGCSEEEE-SSTTSS--------CC---CE
T ss_pred ------------hhhhhHH----------------------Hhhc-----cccceeee-cccccc--------cCcCcEE
Confidence 0111111 0000 11222322 222211 1123566
Q ss_pred EeCccccccccccccccccCCCCccCcccCccccccccccccCCCCCcEEEEEecCcccCCHHHHHHHHHHHHhCC----
Q 011792 241 TVGPLHALLKSRIQEDSVESSPLESNNCVLSKEDRSCMTWLGSQPSRSVLYVSFGSFIKLSGDQILEFWHGIVNSG---- 316 (477)
Q Consensus 241 ~vG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~a~~~~~---- 316 (477)
++|......... ... ......+++++|++..||.... ...+.+.+++....
T Consensus 157 ~~g~pvr~~~~~--------------------~~~---~~~~~~~~~~~ilv~gGs~g~~--~~~~~~~~al~~l~~~~~ 211 (365)
T 3s2u_A 157 TTGNPVRGELFL--------------------DAH---ARAPLTGRRVNLLVLGGSLGAE--PLNKLLPEALAQVPLEIR 211 (365)
T ss_dssp ECCCCCCGGGCC--------------------CTT---SSCCCTTSCCEEEECCTTTTCS--HHHHHHHHHHHTSCTTTC
T ss_pred EECCCCchhhcc--------------------chh---hhcccCCCCcEEEEECCcCCcc--ccchhhHHHHHhcccccc
Confidence 777655332110 000 0111134668899999998642 33345566665543
Q ss_pred CcEEEEEecCCcCCCCCCCCCchhhHhhhcCCCceeeccCHH-HHHhcccccccccccCchhHHHHhhcCCceecCCcc-
Q 011792 317 KGFLWVIRSDLIDGESGVGPVPAELDQGTKERGCIVSWAPQE-EVLAHQAIGGFLTHSGWNSTLESMVAGVPMICWPQV- 394 (477)
Q Consensus 317 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~~p~~-~ll~~~~~~~~I~HGG~gs~~eal~~GvP~l~~P~~- 394 (477)
..++|+.+.... +.... .....+.|+.+.+|+++. .+|+.+|+ +|||+|.+|+.|++++|+|+|++|+.
T Consensus 212 ~~vi~~~G~~~~------~~~~~-~~~~~~~~~~v~~f~~dm~~~l~~aDl--vI~raG~~Tv~E~~a~G~P~Ilip~p~ 282 (365)
T 3s2u_A 212 PAIRHQAGRQHA------EITAE-RYRTVAVEADVAPFISDMAAAYAWADL--VICRAGALTVSELTAAGLPAFLVPLPH 282 (365)
T ss_dssp CEEEEECCTTTH------HHHHH-HHHHTTCCCEEESCCSCHHHHHHHCSE--EEECCCHHHHHHHHHHTCCEEECC---
T ss_pred eEEEEecCcccc------ccccc-eecccccccccccchhhhhhhhccceE--EEecCCcchHHHHHHhCCCeEEeccCC
Confidence 356666632100 01111 112345688999999975 59999888 99999999999999999999999974
Q ss_pred ---chhhhhHHHHhhhhceeeecc-CCCCHHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHH
Q 011792 395 ---GDQQVNSRCVSEIWKIGFDMK-DTCDRSTIEKLVRDLMDNKRDKIMESTVQIAKMARDAVKEGGSSYRNLEKLIEDI 470 (477)
Q Consensus 395 ---~DQ~~na~rv~~~~G~G~~l~-~~~~~~~l~~~v~~ll~~~~~~~~~~a~~l~~~~~~~~~~gg~~~~~~~~~i~~~ 470 (477)
.+|..||..+++ .|+|..+. +++|++.|.++|.++|+| ++. .++|++.+++.-..+ ....+.++|+++
T Consensus 283 ~~~~~Q~~NA~~l~~-~G~a~~l~~~~~~~~~L~~~i~~ll~d--~~~---~~~m~~~a~~~~~~~--aa~~ia~~i~~l 354 (365)
T 3s2u_A 283 AIDDHQTRNAEFLVR-SGAGRLLPQKSTGAAELAAQLSEVLMH--PET---LRSMADQARSLAKPE--ATRTVVDACLEV 354 (365)
T ss_dssp --CCHHHHHHHHHHT-TTSEEECCTTTCCHHHHHHHHHHHHHC--THH---HHHHHHHHHHTCCTT--HHHHHHHHHHHH
T ss_pred CCCcHHHHHHHHHHH-CCCEEEeecCCCCHHHHHHHHHHHHCC--HHH---HHHHHHHHHhcCCcc--HHHHHHHHHHHH
Confidence 589999999965 79999998 689999999999999998 543 345555555531112 234556666665
Q ss_pred HH
Q 011792 471 RL 472 (477)
Q Consensus 471 ~~ 472 (477)
.+
T Consensus 355 ar 356 (365)
T 3s2u_A 355 AR 356 (365)
T ss_dssp C-
T ss_pred Hc
Confidence 44
No 21
>2o6l_A UDP-glucuronosyltransferase 2B7; drug metabolism, rossman, MAD, enzyme, nucleotide binding, sugar,UDP-glucuronosyltransferase, UGT; 1.80A {Homo sapiens}
Probab=99.94 E-value=7.6e-27 Score=202.91 Aligned_cols=162 Identities=18% Similarity=0.374 Sum_probs=135.5
Q ss_pred ccccccccccCCCCCcEEEEEecCcc-cCCHHHHHHHHHHHHhCCCcEEEEEecCCcCCCCCCCCCchhhHhhhcCCCce
Q 011792 273 EDRSCMTWLGSQPSRSVLYVSFGSFI-KLSGDQILEFWHGIVNSGKGFLWVIRSDLIDGESGVGPVPAELDQGTKERGCI 351 (477)
Q Consensus 273 ~~~~~~~~l~~~~~~~~v~vs~Gs~~-~~~~~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~nv~~ 351 (477)
+++++.+|++..+++++||+++||.. ......+..++++++..+.+++|+.++.. .. ..++|+.+
T Consensus 7 l~~~~~~~l~~~~~~~~vlv~~Gs~~~~~~~~~~~~~~~al~~~~~~~~~~~g~~~----------~~----~~~~~v~~ 72 (170)
T 2o6l_A 7 LPKEMEDFVQSSGENGVVVFSLGSMVSNMTEERANVIASALAQIPQKVLWRFDGNK----------PD----TLGLNTRL 72 (170)
T ss_dssp CCHHHHHHHHTTTTTCEEEEECCSCCTTCCHHHHHHHHHHHTTSSSEEEEECCSSC----------CT----TCCTTEEE
T ss_pred CCHHHHHHHHcCCCCCEEEEECCCCcccCCHHHHHHHHHHHHhCCCeEEEEECCcC----------cc----cCCCcEEE
Confidence 45668889986667789999999996 45778889999999888889999985321 11 14579999
Q ss_pred eeccCHHHHHhcccccccccccCchhHHHHhhcCCceecCCccchhhhhHHHHhhhhceeeecc-CCCCHHHHHHHHHHH
Q 011792 352 VSWAPQEEVLAHQAIGGFLTHSGWNSTLESMVAGVPMICWPQVGDQQVNSRCVSEIWKIGFDMK-DTCDRSTIEKLVRDL 430 (477)
Q Consensus 352 ~~~~p~~~ll~~~~~~~~I~HGG~gs~~eal~~GvP~l~~P~~~DQ~~na~rv~~~~G~G~~l~-~~~~~~~l~~~v~~l 430 (477)
.+|+||.++|.++.+++||||||+||++|++++|+|+|++|...||..||.++.+ .|+|+.++ ++++.++|.++|.++
T Consensus 73 ~~~~~~~~~l~~~~ad~~I~~~G~~t~~Ea~~~G~P~i~~p~~~~Q~~na~~l~~-~g~g~~~~~~~~~~~~l~~~i~~l 151 (170)
T 2o6l_A 73 YKWIPQNDLLGHPKTRAFITHGGANGIYEAIYHGIPMVGIPLFADQPDNIAHMKA-RGAAVRVDFNTMSSTDLLNALKRV 151 (170)
T ss_dssp ESSCCHHHHHTSTTEEEEEECCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHT-TTSEEECCTTTCCHHHHHHHHHHH
T ss_pred ecCCCHHHHhcCCCcCEEEEcCCccHHHHHHHcCCCEEeccchhhHHHHHHHHHH-cCCeEEeccccCCHHHHHHHHHHH
Confidence 9999999999554455599999999999999999999999999999999999955 79999998 578999999999999
Q ss_pred HhHhHHHHHHHHHHHHHHHHH
Q 011792 431 MDNKRDKIMESTVQIAKMARD 451 (477)
Q Consensus 431 l~~~~~~~~~~a~~l~~~~~~ 451 (477)
++| ++|+++++++++.+++
T Consensus 152 l~~--~~~~~~a~~~~~~~~~ 170 (170)
T 2o6l_A 152 IND--PSYKENVMKLSRIQHD 170 (170)
T ss_dssp HHC--HHHHHHHHHHC-----
T ss_pred HcC--HHHHHHHHHHHHHhhC
Confidence 998 8999999999998864
No 22
>1f0k_A MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol...; rossmann fold, transferase; 1.90A {Escherichia coli} SCOP: c.87.1.2 PDB: 1nlm_A*
Probab=99.82 E-value=1.2e-18 Score=170.14 Aligned_cols=334 Identities=11% Similarity=0.033 Sum_probs=198.6
Q ss_pred CCEEEEEcCCCCCCHHHHHHHHHHHHhCCCeEEEEeCCccch-hccCCCcccccccCCCCeEEEeCCCC-CCCCCCCCCC
Q 011792 6 VPHVVLLPFPAYGHIKPMLSLAKLFSHAGFRITFVNTDQYHD-RLFGNTDVTAFYKHFPNFLCTSIPDG-LPPDNPRFGI 83 (477)
Q Consensus 6 ~~~il~~~~~~~GHv~p~l~La~~L~~rGH~Vt~~~~~~~~~-~l~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~ 83 (477)
+|||++++.+..||..+++.|+++|.++||+|++++...... ...... ++.+..++.. +.. .
T Consensus 6 ~mkIl~~~~~~gG~~~~~~~la~~L~~~G~~V~v~~~~~~~~~~~~~~~----------g~~~~~~~~~~~~~------~ 69 (364)
T 1f0k_A 6 GKRLMVMAGGTGGHVFPGLAVAHHLMAQGWQVRWLGTADRMEADLVPKH----------GIEIDFIRISGLRG------K 69 (364)
T ss_dssp -CEEEEECCSSHHHHHHHHHHHHHHHTTTCEEEEEECTTSTHHHHGGGG----------TCEEEECCCCCCTT------C
T ss_pred CcEEEEEeCCCccchhHHHHHHHHHHHcCCEEEEEecCCcchhhhcccc----------CCceEEecCCccCc------C
Confidence 389999997766999999999999999999999999854211 111111 2566665521 111 0
Q ss_pred ChHHHHHhhch--hcHHHHHHHHhcCCCCCeEEEECCCcc--hHHHHHHHcCCCeEEEccCchhhHHHHhhhhhhhhcCC
Q 011792 84 YTKDWFCSNKP--VSKLAFRQLLMTPGRLPTCIISDSIMS--FAIDVAEELNIPIITFRPYSAYCSWSDFHFSKLAEEGE 159 (477)
Q Consensus 84 ~~~~~~~~~~~--~~~~~l~~~l~~~~~~~D~vI~D~~~~--~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~~ 159 (477)
.....+..... .....+..++++. +||+|+++.... .+..+++.+|+|++.......
T Consensus 70 ~~~~~~~~~~~~~~~~~~l~~~l~~~--~pDvv~~~~~~~~~~~~~~~~~~~~p~v~~~~~~~----------------- 130 (364)
T 1f0k_A 70 GIKALIAAPLRIFNAWRQARAIMKAY--KPDVVLGMGGYVSGPGGLAAWSLGIPVVLHEQNGI----------------- 130 (364)
T ss_dssp CHHHHHTCHHHHHHHHHHHHHHHHHH--CCSEEEECSSTTHHHHHHHHHHTTCCEEEEECSSS-----------------
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHhc--CCCEEEEeCCcCchHHHHHHHHcCCCEEEEecCCC-----------------
Confidence 11111111111 1233456666655 899999997542 456788889999986422100
Q ss_pred CCCCCCCCCCCceecCCCCCCCCCCCCCccccCCCCCChHHHHHHHhhhcccCCceEEEcChhhhchHHHHHhhhcCCce
Q 011792 160 LPVTDENFDKPVTCIPELENIFRNRDLPSICRHGGPDDPILQTFIRDTSATTRTSALVINTFNEIEGPIISKLGSRLTKI 239 (477)
Q Consensus 160 ~p~~~~~~~~~~~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ns~~~le~p~l~~~~~~~p~~ 239 (477)
++. ... .. ...++.+++.+... .|++
T Consensus 131 ---------------~~~----------------------~~~---~~--~~~~d~v~~~~~~~------------~~~~ 156 (364)
T 1f0k_A 131 ---------------AGL----------------------TNK---WL--AKIATKVMQAFPGA------------FPNA 156 (364)
T ss_dssp ---------------CCH----------------------HHH---HH--TTTCSEEEESSTTS------------SSSC
T ss_pred ---------------CcH----------------------HHH---HH--HHhCCEEEecChhh------------cCCc
Confidence 000 000 00 12345555544211 1245
Q ss_pred eEeCccccccccccccccccCCCCccCcccCccccccccccccCCCCCcEEEEEecCcccCCHHHHHHHHHHHHhC--CC
Q 011792 240 YTVGPLHALLKSRIQEDSVESSPLESNNCVLSKEDRSCMTWLGSQPSRSVLYVSFGSFIKLSGDQILEFWHGIVNS--GK 317 (477)
Q Consensus 240 ~~vG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~a~~~~--~~ 317 (477)
..+|....... .. . +. ..+.+....++++|++..|+... ......++++++.. +.
T Consensus 157 ~~i~n~v~~~~----------~~-----~-----~~-~~~~~~~~~~~~~il~~~g~~~~--~k~~~~li~a~~~l~~~~ 213 (364)
T 1f0k_A 157 EVVGNPVRTDV----------LA-----L-----PL-PQQRLAGREGPVRVLVVGGSQGA--RILNQTMPQVAAKLGDSV 213 (364)
T ss_dssp EECCCCCCHHH----------HT-----S-----CC-HHHHHTTCCSSEEEEEECTTTCC--HHHHHHHHHHHHHHGGGE
T ss_pred eEeCCccchhh----------cc-----c-----ch-hhhhcccCCCCcEEEEEcCchHh--HHHHHHHHHHHHHhcCCc
Confidence 56665332211 00 0 00 00111112345678888888753 33445555666554 34
Q ss_pred cEEEEEecCCcCCCCCCCCCchhhHh---hhc-CCCceeeccC-HHHHHhcccccccccccCchhHHHHhhcCCceecCC
Q 011792 318 GFLWVIRSDLIDGESGVGPVPAELDQ---GTK-ERGCIVSWAP-QEEVLAHQAIGGFLTHSGWNSTLESMVAGVPMICWP 392 (477)
Q Consensus 318 ~~i~~~~~~~~~~~~~~~~~~~~~~~---~~~-~nv~~~~~~p-~~~ll~~~~~~~~I~HGG~gs~~eal~~GvP~l~~P 392 (477)
++++.++. | . ...+.+ +.+ +|+.+.+|++ -..++..+++ +|+++|.+++.||+++|+|+|+.|
T Consensus 214 ~~l~i~G~------~---~-~~~l~~~~~~~~~~~v~~~g~~~~~~~~~~~ad~--~v~~sg~~~~~EAma~G~Pvi~~~ 281 (364)
T 1f0k_A 214 TIWHQSGK------G---S-QQSVEQAYAEAGQPQHKVTEFIDDMAAAYAWADV--VVCRSGALTVSEIAAAGLPALFVP 281 (364)
T ss_dssp EEEEECCT------T---C-HHHHHHHHHHTTCTTSEEESCCSCHHHHHHHCSE--EEECCCHHHHHHHHHHTCCEEECC
T ss_pred EEEEEcCC------c---h-HHHHHHHHhhcCCCceEEecchhhHHHHHHhCCE--EEECCchHHHHHHHHhCCCEEEee
Confidence 55566632 1 1 122221 112 5899999995 4679989888 999999999999999999999999
Q ss_pred cc---chhhhhHHHHhhhhceeeecc-CCCCHHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHH
Q 011792 393 QV---GDQQVNSRCVSEIWKIGFDMK-DTCDRSTIEKLVRDLMDNKRDKIMESTVQIAKMARDAVKEGGSSYRNLEKLIE 468 (477)
Q Consensus 393 ~~---~DQ~~na~rv~~~~G~G~~l~-~~~~~~~l~~~v~~ll~~~~~~~~~~a~~l~~~~~~~~~~gg~~~~~~~~~i~ 468 (477)
.. .||..|+..+.+ .|.|..++ .+++.+++.+++.++ | +..+++..+-+.... ...++..+.+.++
T Consensus 282 ~~g~~~~q~~~~~~~~~-~g~g~~~~~~d~~~~~la~~i~~l--~--~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~ 351 (364)
T 1f0k_A 282 FQHKDRQQYWNALPLEK-AGAAKIIEQPQLSVDAVANTLAGW--S--RETLLTMAERARAAS-----IPDATERVANEVS 351 (364)
T ss_dssp CCCTTCHHHHHHHHHHH-TTSEEECCGGGCCHHHHHHHHHTC--C--HHHHHHHHHHHHHTC-----CTTHHHHHHHHHH
T ss_pred CCCCchhHHHHHHHHHh-CCcEEEeccccCCHHHHHHHHHhc--C--HHHHHHHHHHHHHhh-----ccCHHHHHHHHHH
Confidence 87 799999999965 69999887 567799999999999 5 555555444443332 1233555555555
Q ss_pred HHHHh
Q 011792 469 DIRLM 473 (477)
Q Consensus 469 ~~~~~ 473 (477)
++..+
T Consensus 352 ~~y~~ 356 (364)
T 1f0k_A 352 RVARA 356 (364)
T ss_dssp HHHTT
T ss_pred HHHHH
Confidence 55443
No 23
>3hbm_A UDP-sugar hydrolase; PSEG; 1.80A {Campylobacter jejuni subsp} PDB: 3hbn_A*
Probab=99.59 E-value=5.6e-14 Score=130.35 Aligned_cols=115 Identities=8% Similarity=0.040 Sum_probs=86.6
Q ss_pred CCcEEEEEecCcccCCHHHHHHHHHHHHhCCCcEEEEEecCCcCCCCCCCCCchhhHhh--hcCCCceeeccCHHH-HHh
Q 011792 286 SRSVLYVSFGSFIKLSGDQILEFWHGIVNSGKGFLWVIRSDLIDGESGVGPVPAELDQG--TKERGCIVSWAPQEE-VLA 362 (477)
Q Consensus 286 ~~~~v~vs~Gs~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~--~~~nv~~~~~~p~~~-ll~ 362 (477)
..+.|+|++|.... ......+++++.... ++.++.+.. ....+.+.+. ...|+.+..|+++.. ++.
T Consensus 156 ~~~~ILv~~GG~d~--~~l~~~vl~~L~~~~-~i~vv~G~~--------~~~~~~l~~~~~~~~~v~v~~~~~~m~~~m~ 224 (282)
T 3hbm_A 156 KKYDFFICMGGTDI--KNLSLQIASELPKTK-IISIATSSS--------NPNLKKLQKFAKLHNNIRLFIDHENIAKLMN 224 (282)
T ss_dssp CCEEEEEECCSCCT--TCHHHHHHHHSCTTS-CEEEEECTT--------CTTHHHHHHHHHTCSSEEEEESCSCHHHHHH
T ss_pred cCCeEEEEECCCch--hhHHHHHHHHhhcCC-CEEEEECCC--------chHHHHHHHHHhhCCCEEEEeCHHHHHHHHH
Confidence 35689999997643 346667788876644 566666321 1222332221 124889999999775 998
Q ss_pred cccccccccccCchhHHHHhhcCCceecCCccchhhhhHHHHhhhhceeeecc
Q 011792 363 HQAIGGFLTHSGWNSTLESMVAGVPMICWPQVGDQQVNSRCVSEIWKIGFDMK 415 (477)
Q Consensus 363 ~~~~~~~I~HGG~gs~~eal~~GvP~l~~P~~~DQ~~na~rv~~~~G~G~~l~ 415 (477)
.+++ +||+|| +|++|+++.|+|+|++|...+|..||..+++ .|++..+.
T Consensus 225 ~aDl--vI~~gG-~T~~E~~~~g~P~i~ip~~~~Q~~nA~~l~~-~G~~~~~~ 273 (282)
T 3hbm_A 225 ESNK--LIISAS-SLVNEALLLKANFKAICYVKNQESTATWLAK-KGYEVEYK 273 (282)
T ss_dssp TEEE--EEEESS-HHHHHHHHTTCCEEEECCSGGGHHHHHHHHH-TTCEEECG
T ss_pred HCCE--EEECCc-HHHHHHHHcCCCEEEEeCCCCHHHHHHHHHH-CCCEEEcc
Confidence 8888 999998 8999999999999999999999999999965 79999885
No 24
>2jzc_A UDP-N-acetylglucosamine transferase subunit ALG13; rossmann-like fold, endoplasmic reticulum, glycosyltransferase, structural genomics; NMR {Saccharomyces cerevisiae} PDB: 2ks6_A
Probab=99.59 E-value=2.2e-15 Score=134.10 Aligned_cols=133 Identities=12% Similarity=0.117 Sum_probs=96.4
Q ss_pred CCCCcEEEEEecCcccCCHHHHHHH-----HHHHHhCC-CcEEEEEecCCcCCCCCCCCCchhhHhhh---------c--
Q 011792 284 QPSRSVLYVSFGSFIKLSGDQILEF-----WHGIVNSG-KGFLWVIRSDLIDGESGVGPVPAELDQGT---------K-- 346 (477)
Q Consensus 284 ~~~~~~v~vs~Gs~~~~~~~~~~~~-----~~a~~~~~-~~~i~~~~~~~~~~~~~~~~~~~~~~~~~---------~-- 346 (477)
..++++|||+.||... -.+++..+ ++++...+ .++|++++..... ....+.+.. |
T Consensus 25 ~~~~~~VlVtgGS~~~-~n~li~~vl~~~~l~~L~~~~~~~vv~q~G~~~~~-------~~~~~~~~~~~~~~~~l~p~~ 96 (224)
T 2jzc_A 25 IIEEKALFVTCGATVP-FPKLVSCVLSDEFCQELIQYGFVRLIIQFGRNYSS-------EFEHLVQERGGQRESQKIPID 96 (224)
T ss_dssp CCCSCCEEEECCSCCS-CHHHHHHHTSHHHHHHHHTTTCCCEEECCCSSSCC-------CCCSHHHHHTCEECSCCCSSC
T ss_pred CCCCCEEEEEcCCchH-HHHHHHHHHHHHHHHHHhcCCCeEEEEEECCCchh-------hHHHHHHhhhccccccccccc
Confidence 3467899999999732 34444444 48887777 7899998653210 111110000 1
Q ss_pred ---------------CC--CceeeccCHH-HHHh-cccccccccccCchhHHHHhhcCCceecCCcc----chhhhhHHH
Q 011792 347 ---------------ER--GCIVSWAPQE-EVLA-HQAIGGFLTHSGWNSTLESMVAGVPMICWPQV----GDQQVNSRC 403 (477)
Q Consensus 347 ---------------~n--v~~~~~~p~~-~ll~-~~~~~~~I~HGG~gs~~eal~~GvP~l~~P~~----~DQ~~na~r 403 (477)
.+ +.+.+|+++. .+|+ .+++ ||||||.||++|++++|+|+|++|.. .||..||++
T Consensus 97 ~~~~~~~~~~~~~~~~~~~v~v~~f~~~m~~~l~~~Adl--vIshaGagTv~Eal~~G~P~IvVP~~~~~~~HQ~~nA~~ 174 (224)
T 2jzc_A 97 QFGCGDTARQYVLMNGKLKVIGFDFSTKMQSIIRDYSDL--VISHAGTGSILDSLRLNKPLIVCVNDSLMDNHQQQIADK 174 (224)
T ss_dssp TTCTTCSCEEEESTTTSSEEEECCSSSSHHHHHHHHCSC--EEESSCHHHHHHHHHTTCCCCEECCSSCCCCHHHHHHHH
T ss_pred cccccccccccccccCCceEEEeeccchHHHHHHhcCCE--EEECCcHHHHHHHHHhCCCEEEEcCcccccchHHHHHHH
Confidence 23 3456888875 7999 9888 99999999999999999999999984 479999999
Q ss_pred HhhhhceeeeccCCCCHHHHHHHHHHHH
Q 011792 404 VSEIWKIGFDMKDTCDRSTIEKLVRDLM 431 (477)
Q Consensus 404 v~~~~G~G~~l~~~~~~~~l~~~v~~ll 431 (477)
+++ .|+++.+ +.+.|.++|.++.
T Consensus 175 l~~-~G~~~~~----~~~~L~~~i~~l~ 197 (224)
T 2jzc_A 175 FVE-LGYVWSC----APTETGLIAGLRA 197 (224)
T ss_dssp HHH-HSCCCEE----CSCTTTHHHHHHH
T ss_pred HHH-CCCEEEc----CHHHHHHHHHHHH
Confidence 965 7998765 6788888888873
No 25
>3okp_A GDP-mannose-dependent alpha-(1-6)-phosphatidylino monomannoside mannosyltransferase...; GT-B fold, alpha-mannosyltransferase; HET: GDD; 2.00A {Corynebacterium glutamicum} PDB: 3okc_A* 3oka_A*
Probab=99.31 E-value=6.3e-10 Score=109.07 Aligned_cols=311 Identities=11% Similarity=0.065 Sum_probs=169.8
Q ss_pred CCEEEEEcC--C--CCCCHHHHHHHHHHHHhCCCeEEEEeCCccch---hccCCCcccccccCCCCeEEEeCCCCCCCCC
Q 011792 6 VPHVVLLPF--P--AYGHIKPMLSLAKLFSHAGFRITFVNTDQYHD---RLFGNTDVTAFYKHFPNFLCTSIPDGLPPDN 78 (477)
Q Consensus 6 ~~~il~~~~--~--~~GHv~p~l~La~~L~~rGH~Vt~~~~~~~~~---~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 78 (477)
+|||++++. + ..|.-..+..|++.| +||+|++++...... .... ...+.+..++.....
T Consensus 4 ~mkIl~v~~~~~p~~gG~~~~~~~l~~~L--~g~~v~v~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~-- 69 (394)
T 3okp_A 4 SRKTLVVTNDFPPRIGGIQSYLRDFIATQ--DPESIVVFASTQNAEEAHAYDK----------TLDYEVIRWPRSVML-- 69 (394)
T ss_dssp CCCEEEEESCCTTSCSHHHHHHHHHHTTS--CGGGEEEEEECSSHHHHHHHHT----------TCSSEEEEESSSSCC--
T ss_pred CceEEEEeCccCCccchHHHHHHHHHHHh--cCCeEEEEECCCCccchhhhcc----------ccceEEEEccccccc--
Confidence 689999985 3 237778889999999 799999999855432 1111 122666666521110
Q ss_pred CCCCCChHHHHHhhchhcHHHHHHHHhcCCCCCeEEEECCCcc--hHHHHHHHcCCCeEE-EccCchhhHHHHhhhhhhh
Q 011792 79 PRFGIYTKDWFCSNKPVSKLAFRQLLMTPGRLPTCIISDSIMS--FAIDVAEELNIPIIT-FRPYSAYCSWSDFHFSKLA 155 (477)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~D~vI~D~~~~--~~~~~A~~lgiP~v~-~~~~~~~~~~~~~~~~~~~ 155 (477)
... .....+..++++. +||+|++..... ....+++.+|+|.+. .........
T Consensus 70 -----~~~--------~~~~~l~~~~~~~--~~Dvv~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~---------- 124 (394)
T 3okp_A 70 -----PTP--------TTAHAMAEIIRER--EIDNVWFGAAAPLALMAGTAKQAGASKVIASTHGHEVGW---------- 124 (394)
T ss_dssp -----SCH--------HHHHHHHHHHHHT--TCSEEEESSCTTGGGGHHHHHHTTCSEEEEECCSTHHHH----------
T ss_pred -----cch--------hhHHHHHHHHHhc--CCCEEEECCcchHHHHHHHHHhcCCCcEEEEeccchhhh----------
Confidence 001 1234566777766 899999876544 455678889998444 322111000
Q ss_pred hcCCCCCCCCCCCCCceecCCCCCCCCCCCCCccccCCCCCChHHHHHHHhhhcccCCceEEEcChhhhchHHHHHhhhc
Q 011792 156 EEGELPVTDENFDKPVTCIPELENIFRNRDLPSICRHGGPDDPILQTFIRDTSATTRTSALVINTFNEIEGPIISKLGSR 235 (477)
Q Consensus 156 ~~~~~p~~~~~~~~~~~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ns~~~le~p~l~~~~~~ 235 (477)
. .........+.. ...++.+++.|....+.- .+.. ..
T Consensus 125 ------------------~---------------------~~~~~~~~~~~~--~~~~d~ii~~s~~~~~~~-~~~~-~~ 161 (394)
T 3okp_A 125 ------------------S---------------------MLPGSRQSLRKI--GTEVDVLTYISQYTLRRF-KSAF-GS 161 (394)
T ss_dssp ------------------T---------------------TSHHHHHHHHHH--HHHCSEEEESCHHHHHHH-HHHH-CS
T ss_pred ------------------h---------------------hcchhhHHHHHH--HHhCCEEEEcCHHHHHHH-HHhc-CC
Confidence 0 000111111221 256788888885433221 1111 11
Q ss_pred CCceeEeCccccccccccccccccCCCCccCcccCccccccccccccCCCCCcEEEEEecCccc-CCHHHHHHHHHHHHh
Q 011792 236 LTKIYTVGPLHALLKSRIQEDSVESSPLESNNCVLSKEDRSCMTWLGSQPSRSVLYVSFGSFIK-LSGDQILEFWHGIVN 314 (477)
Q Consensus 236 ~p~~~~vG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~Gs~~~-~~~~~~~~~~~a~~~ 314 (477)
..++..|..-..... +. .........+.+-++ .+++..+++..|+... ...+.+-..+..+..
T Consensus 162 ~~~~~vi~ngv~~~~----------~~-----~~~~~~~~~~~~~~~-~~~~~~~i~~~G~~~~~Kg~~~li~a~~~l~~ 225 (394)
T 3okp_A 162 HPTFEHLPSGVDVKR----------FT-----PATPEDKSATRKKLG-FTDTTPVIACNSRLVPRKGQDSLIKAMPQVIA 225 (394)
T ss_dssp SSEEEECCCCBCTTT----------SC-----CCCHHHHHHHHHHTT-CCTTCCEEEEESCSCGGGCHHHHHHHHHHHHH
T ss_pred CCCeEEecCCcCHHH----------cC-----CCCchhhHHHHHhcC-CCcCceEEEEEeccccccCHHHHHHHHHHHHh
Confidence 235656654332211 10 000001111222222 1233456778888753 333333333333333
Q ss_pred C--CCcEEEEEecCCcCCCCCCCCCchhhH---hhhcCCCceeeccCHHH---HHhccccccccc-----------ccCc
Q 011792 315 S--GKGFLWVIRSDLIDGESGVGPVPAELD---QGTKERGCIVSWAPQEE---VLAHQAIGGFLT-----------HSGW 375 (477)
Q Consensus 315 ~--~~~~i~~~~~~~~~~~~~~~~~~~~~~---~~~~~nv~~~~~~p~~~---ll~~~~~~~~I~-----------HGG~ 375 (477)
. +.++++ ++. | .....+. .+..+++.+.+|+|+.+ ++..+++ +|. -|..
T Consensus 226 ~~~~~~l~i-~G~------g---~~~~~l~~~~~~~~~~v~~~g~~~~~~~~~~~~~ad~--~v~ps~~~~~~~~~e~~~ 293 (394)
T 3okp_A 226 ARPDAQLLI-VGS------G---RYESTLRRLATDVSQNVKFLGRLEYQDMINTLAAADI--FAMPARTRGGGLDVEGLG 293 (394)
T ss_dssp HSTTCEEEE-ECC------C---TTHHHHHHHTGGGGGGEEEEESCCHHHHHHHHHHCSE--EEECCCCBGGGTBCCSSC
T ss_pred hCCCeEEEE-EcC------c---hHHHHHHHHHhcccCeEEEcCCCCHHHHHHHHHhCCE--EEecCccccccccccccC
Confidence 2 334433 321 1 1112221 23357899999998666 6777777 775 5556
Q ss_pred hhHHHHhhcCCceecCCccchhhhhHHHHhhhhceeeeccCCCCHHHHHHHHHHHHhH
Q 011792 376 NSTLESMVAGVPMICWPQVGDQQVNSRCVSEIWKIGFDMKDTCDRSTIEKLVRDLMDN 433 (477)
Q Consensus 376 gs~~eal~~GvP~l~~P~~~DQ~~na~rv~~~~G~G~~l~~~~~~~~l~~~v~~ll~~ 433 (477)
.++.||+++|+|+|+.+.. .....+ + .|.|... ..-+.+++.+++.++++|
T Consensus 294 ~~~~Ea~a~G~PvI~~~~~----~~~e~i-~-~~~g~~~-~~~d~~~l~~~i~~l~~~ 344 (394)
T 3okp_A 294 IVYLEAQACGVPVIAGTSG----GAPETV-T-PATGLVV-EGSDVDKLSELLIELLDD 344 (394)
T ss_dssp HHHHHHHHTTCCEEECSST----TGGGGC-C-TTTEEEC-CTTCHHHHHHHHHHHHTC
T ss_pred cHHHHHHHcCCCEEEeCCC----ChHHHH-h-cCCceEe-CCCCHHHHHHHHHHHHhC
Confidence 7999999999999997643 333344 4 3566666 345899999999999997
No 26
>1v4v_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, two domains, homodimer, riken structural genomics/proteomics initiative, RSGI; HET: MSE; 1.80A {Thermus thermophilus} SCOP: c.87.1.3
Probab=99.30 E-value=7.9e-11 Score=115.05 Aligned_cols=84 Identities=15% Similarity=0.209 Sum_probs=64.5
Q ss_pred CCCceeeccCH---HHHHhcccccccccccCchhHHHHhhcCCceecCCccchhhhhHHHHhhhhceeeeccCCCCHHHH
Q 011792 347 ERGCIVSWAPQ---EEVLAHQAIGGFLTHSGWNSTLESMVAGVPMICWPQVGDQQVNSRCVSEIWKIGFDMKDTCDRSTI 423 (477)
Q Consensus 347 ~nv~~~~~~p~---~~ll~~~~~~~~I~HGG~gs~~eal~~GvP~l~~P~~~DQ~~na~rv~~~~G~G~~l~~~~~~~~l 423 (477)
+++.+.+++++ ..++..+++ ||+.+| |.+.||+++|+|+|+.+...++... + + .|.|+.+. .++++|
T Consensus 255 ~~v~~~g~~g~~~~~~~~~~ad~--~v~~S~-g~~lEA~a~G~PvI~~~~~~~~~~~---~-~-~g~g~lv~--~d~~~l 324 (376)
T 1v4v_A 255 RNFVLLDPLEYGSMAALMRASLL--LVTDSG-GLQEEGAALGVPVVVLRNVTERPEG---L-K-AGILKLAG--TDPEGV 324 (376)
T ss_dssp TTEEEECCCCHHHHHHHHHTEEE--EEESCH-HHHHHHHHTTCCEEECSSSCSCHHH---H-H-HTSEEECC--SCHHHH
T ss_pred CCEEEECCCCHHHHHHHHHhCcE--EEECCc-CHHHHHHHcCCCEEeccCCCcchhh---h-c-CCceEECC--CCHHHH
Confidence 57888866665 468888888 999883 5566999999999998876766652 3 4 58887774 499999
Q ss_pred HHHHHHHHhHhHHHHHHHH
Q 011792 424 EKLVRDLMDNKRDKIMEST 442 (477)
Q Consensus 424 ~~~v~~ll~~~~~~~~~~a 442 (477)
.+++.++++| +..+++.
T Consensus 325 a~~i~~ll~d--~~~~~~~ 341 (376)
T 1v4v_A 325 YRVVKGLLEN--PEELSRM 341 (376)
T ss_dssp HHHHHHHHTC--HHHHHHH
T ss_pred HHHHHHHHhC--hHhhhhh
Confidence 9999999997 6544433
No 27
>3fro_A GLGA glycogen synthase; glycosyltransferase family, UDP/ADP-glucose-glycogen synthas rossman folds, transferase; HET: NHF; 2.50A {Pyrococcus abyssi} SCOP: c.87.1.8 PDB: 2bis_A* 3l01_A*
Probab=99.23 E-value=2.7e-09 Score=106.06 Aligned_cols=131 Identities=13% Similarity=0.109 Sum_probs=79.0
Q ss_pred EEEEEecCcc-c-CCHHHHHHHHHHHHhCC--CcEEEEEecCCcCCCCCCC--CCchhhHhhhcCCCceeeccCHHH---
Q 011792 289 VLYVSFGSFI-K-LSGDQILEFWHGIVNSG--KGFLWVIRSDLIDGESGVG--PVPAELDQGTKERGCIVSWAPQEE--- 359 (477)
Q Consensus 289 ~v~vs~Gs~~-~-~~~~~~~~~~~a~~~~~--~~~i~~~~~~~~~~~~~~~--~~~~~~~~~~~~nv~~~~~~p~~~--- 359 (477)
.+++..|+.. . ...+.+-..+..+.... ..+-+.+-++ |... ..-..+.++.++++.+.+|+|+.+
T Consensus 252 ~~i~~~G~~~~~~Kg~~~li~a~~~l~~~~~~~~~~l~i~G~-----g~~~~~~~l~~~~~~~~~~~~~~g~~~~~~~~~ 326 (439)
T 3fro_A 252 VTFMFIGRFDRGQKGVDVLLKAIEILSSKKEFQEMRFIIIGK-----GDPELEGWARSLEEKHGNVKVITEMLSREFVRE 326 (439)
T ss_dssp EEEEEECCSSCTTBCHHHHHHHHHHHHTSGGGGGEEEEEECC-----CCHHHHHHHHHHHHHCTTEEEECSCCCHHHHHH
T ss_pred cEEEEEcccccccccHHHHHHHHHHHHhcccCCCeEEEEEcC-----CChhHHHHHHHHHhhcCCEEEEcCCCCHHHHHH
Confidence 6778888886 3 34454444444554422 2333333221 1100 000111222344455679899865
Q ss_pred HHhccccccccc----ccCchhHHHHhhcCCceecCCccchhhhhHHHHhhhhceeeeccCCCCHHHHHHHHHHHHh-H
Q 011792 360 VLAHQAIGGFLT----HSGWNSTLESMVAGVPMICWPQVGDQQVNSRCVSEIWKIGFDMKDTCDRSTIEKLVRDLMD-N 433 (477)
Q Consensus 360 ll~~~~~~~~I~----HGG~gs~~eal~~GvP~l~~P~~~DQ~~na~rv~~~~G~G~~l~~~~~~~~l~~~v~~ll~-~ 433 (477)
++..+++ +|. -|-..++.||+++|+|+|+... ......+ + .|.|..++ .-+.+++.++|.++++ |
T Consensus 327 ~~~~adv--~v~ps~~e~~~~~~~EAma~G~Pvi~s~~----~~~~e~~-~-~~~g~~~~-~~d~~~la~~i~~ll~~~ 396 (439)
T 3fro_A 327 LYGSVDF--VIIPSYFEPFGLVALEAMCLGAIPIASAV----GGLRDII-T-NETGILVK-AGDPGELANAILKALELS 396 (439)
T ss_dssp HHTTCSE--EEECBSCCSSCHHHHHHHHTTCEEEEESS----THHHHHC-C-TTTCEEEC-TTCHHHHHHHHHHHHHHT
T ss_pred HHHHCCE--EEeCCCCCCccHHHHHHHHCCCCeEEcCC----CCcceeE-E-cCceEEeC-CCCHHHHHHHHHHHHhcC
Confidence 6777777 663 2334799999999999998743 3444444 4 36777764 4589999999999998 5
No 28
>3c48_A Predicted glycosyltransferases; retaining glycosyltransferase, beta alpha beta, substrate AS catalysis; 2.10A {Corynebacterium glutamicum} PDB: 3c4v_A* 3c4q_A*
Probab=99.22 E-value=1.1e-08 Score=101.97 Aligned_cols=374 Identities=14% Similarity=0.080 Sum_probs=181.4
Q ss_pred CCEEEEEcC---C--------CCCCHHHHHHHHHHHHhCCCeEEEEeCCccchhccCCCcccccccCCCCeEEEeCCCCC
Q 011792 6 VPHVVLLPF---P--------AYGHIKPMLSLAKLFSHAGFRITFVNTDQYHDRLFGNTDVTAFYKHFPNFLCTSIPDGL 74 (477)
Q Consensus 6 ~~~il~~~~---~--------~~GHv~p~l~La~~L~~rGH~Vt~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~ 74 (477)
+|||++++. | .-|+-..+..|++.|.++||+|++++.......- . .....+++.++.++...
T Consensus 20 mmkIl~i~~~~~p~~~~~~~~~GG~~~~~~~la~~L~~~G~~V~v~~~~~~~~~~-~------~~~~~~~v~v~~~~~~~ 92 (438)
T 3c48_A 20 HMRVAMISMHTSPLQQPGTGDSGGMNVYILSTATELAKQGIEVDIYTRATRPSQG-E------IVRVAENLRVINIAAGP 92 (438)
T ss_dssp CCEEEEECTTSCTTCC-------CHHHHHHHHHHHHHHTTCEEEEEEECCCGGGC-S------EEEEETTEEEEEECCSC
T ss_pred hheeeeEEeeccccccCCCCCCCCHHHHHHHHHHHHHhcCCEEEEEecCCCCCCc-c------cccccCCeEEEEecCCC
Confidence 589999995 2 2477788999999999999999999974321110 0 00111236666665221
Q ss_pred CCCCCCCCCChHHHHHhhchhcHHHHHHH-HhcCCCCCeEEEECCCcc--hHHHHHHHcCCCeEEEccCchhhHHHHhhh
Q 011792 75 PPDNPRFGIYTKDWFCSNKPVSKLAFRQL-LMTPGRLPTCIISDSIMS--FAIDVAEELNIPIITFRPYSAYCSWSDFHF 151 (477)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-l~~~~~~~D~vI~D~~~~--~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~ 151 (477)
.... ........+..+ ...+... ++... +||+|++..... .+..+++.+|+|+|...........
T Consensus 93 ~~~~--~~~~~~~~~~~~----~~~~~~~~~~~~~-~~Div~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~~~----- 160 (438)
T 3c48_A 93 YEGL--SKEELPTQLAAF----TGGMLSFTRREKV-TYDLIHSHYWLSGQVGWLLRDLWRIPLIHTAHTLAAVKN----- 160 (438)
T ss_dssp SSSC--CGGGGGGGHHHH----HHHHHHHHHHHTC-CCSEEEEEHHHHHHHHHHHHHHHTCCEEEECSSCHHHHS-----
T ss_pred cccc--chhHHHHHHHHH----HHHHHHHHHhccC-CCCEEEeCCccHHHHHHHHHHHcCCCEEEEecCCccccc-----
Confidence 1100 001111111111 1122222 44332 599999976332 3445778889999886544321100
Q ss_pred hhhhhcCCCCCCCCCCCCCceecCCCCCCCCCCCCCccccCCCCCChHHHHHHHhhhcccCCceEEEcChhhhchHHHHH
Q 011792 152 SKLAEEGELPVTDENFDKPVTCIPELENIFRNRDLPSICRHGGPDDPILQTFIRDTSATTRTSALVINTFNEIEGPIISK 231 (477)
Q Consensus 152 ~~~~~~~~~p~~~~~~~~~~~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ns~~~le~p~l~~ 231 (477)
. .+.. ... .. ......... .....++.+++.|....+.- .+.
T Consensus 161 ------~-----------------~~~~----~~~---~~-----~~~~~~~~~--~~~~~~d~ii~~s~~~~~~~-~~~ 202 (438)
T 3c48_A 161 ------S-----------------YRDD----SDT---PE-----SEARRICEQ--QLVDNADVLAVNTQEEMQDL-MHH 202 (438)
T ss_dssp ------C-----------------C--------CC---HH-----HHHHHHHHH--HHHHHCSEEEESSHHHHHHH-HHH
T ss_pred ------c-----------------cccc----cCC---cc-----hHHHHHHHH--HHHhcCCEEEEcCHHHHHHH-HHH
Confidence 0 0000 000 00 000111111 12366888998885433221 111
Q ss_pred hhhcC-CceeEeCccccccccccccccccCCCCccCcccCccccccccccccCCCCCcEEEEEecCccc-CCHHHHHHHH
Q 011792 232 LGSRL-TKIYTVGPLHALLKSRIQEDSVESSPLESNNCVLSKEDRSCMTWLGSQPSRSVLYVSFGSFIK-LSGDQILEFW 309 (477)
Q Consensus 232 ~~~~~-p~~~~vG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~Gs~~~-~~~~~~~~~~ 309 (477)
. ... .++..|..-..... +. .........+.+-++ ...+..+++..|+... ...+.+-..+
T Consensus 203 ~-g~~~~k~~vi~ngvd~~~----------~~-----~~~~~~~~~~r~~~~-~~~~~~~i~~~G~~~~~Kg~~~li~a~ 265 (438)
T 3c48_A 203 Y-DADPDRISVVSPGADVEL----------YS-----PGNDRATERSRRELG-IPLHTKVVAFVGRLQPFKGPQVLIKAV 265 (438)
T ss_dssp H-CCCGGGEEECCCCCCTTT----------SC-----CC----CHHHHHHTT-CCSSSEEEEEESCBSGGGCHHHHHHHH
T ss_pred h-CCChhheEEecCCccccc----------cC-----CcccchhhhhHHhcC-CCCCCcEEEEEeeecccCCHHHHHHHH
Confidence 1 111 24555554332111 10 000000000111122 1233456777888753 3333333333
Q ss_pred HHHHh-CC-CcE-EEEEecCCcCCCCCCCCCchhhH---hh--hcCCCceeeccCHH---HHHhcccccccccc----cC
Q 011792 310 HGIVN-SG-KGF-LWVIRSDLIDGESGVGPVPAELD---QG--TKERGCIVSWAPQE---EVLAHQAIGGFLTH----SG 374 (477)
Q Consensus 310 ~a~~~-~~-~~~-i~~~~~~~~~~~~~~~~~~~~~~---~~--~~~nv~~~~~~p~~---~ll~~~~~~~~I~H----GG 374 (477)
..+.. .+ .++ ++.++..... | .....+. ++ ..++|.+.+|+|+. .++..+++ +|.- |.
T Consensus 266 ~~l~~~~p~~~~~l~i~G~~~~~--g---~~~~~l~~~~~~~~l~~~v~~~g~~~~~~~~~~~~~adv--~v~ps~~e~~ 338 (438)
T 3c48_A 266 AALFDRDPDRNLRVIICGGPSGP--N---ATPDTYRHMAEELGVEKRIRFLDPRPPSELVAVYRAADI--VAVPSFNESF 338 (438)
T ss_dssp HHHHHHCTTCSEEEEEECCBC-----------CHHHHHHHHTTCTTTEEEECCCCHHHHHHHHHHCSE--EEECCSCCSS
T ss_pred HHHHhhCCCcceEEEEEeCCCCC--C---cHHHHHHHHHHHcCCCCcEEEcCCCChHHHHHHHHhCCE--EEECccccCC
Confidence 33332 22 233 3334321000 1 1111111 11 24689999999875 47777887 6654 33
Q ss_pred chhHHHHhhcCCceecCCccchhhhhHHHHhhhhceeeeccCCCCHHHHHHHHHHHHhHhHHH----HHHHHHHHHHHHH
Q 011792 375 WNSTLESMVAGVPMICWPQVGDQQVNSRCVSEIWKIGFDMKDTCDRSTIEKLVRDLMDNKRDK----IMESTVQIAKMAR 450 (477)
Q Consensus 375 ~gs~~eal~~GvP~l~~P~~~DQ~~na~rv~~~~G~G~~l~~~~~~~~l~~~v~~ll~~~~~~----~~~~a~~l~~~~~ 450 (477)
..++.||+++|+|+|+.+. ......+ +.-+.|...+ .-+.+++.++|.++++| +. +.+++++....+.
T Consensus 339 ~~~~~Eama~G~PvI~~~~----~~~~e~i-~~~~~g~~~~-~~d~~~la~~i~~l~~~--~~~~~~~~~~~~~~~~~~s 410 (438)
T 3c48_A 339 GLVAMEAQASGTPVIAARV----GGLPIAV-AEGETGLLVD-GHSPHAWADALATLLDD--DETRIRMGEDAVEHARTFS 410 (438)
T ss_dssp CHHHHHHHHTTCCEEEESC----TTHHHHS-CBTTTEEEES-SCCHHHHHHHHHHHHHC--HHHHHHHHHHHHHHHHHHH
T ss_pred chHHHHHHHcCCCEEecCC----CChhHHh-hCCCcEEECC-CCCHHHHHHHHHHHHcC--HHHHHHHHHHHHHHHHhCC
Confidence 5689999999999999754 3344445 3335676663 45899999999999986 43 3444554444432
Q ss_pred HHHHcCCChHHHHHHHHHHHHHh
Q 011792 451 DAVKEGGSSYRNLEKLIEDIRLM 473 (477)
Q Consensus 451 ~~~~~gg~~~~~~~~~i~~~~~~ 473 (477)
-. .....+.+++++++..
T Consensus 411 ~~-----~~~~~~~~~~~~~~~~ 428 (438)
T 3c48_A 411 WA-----ATAAQLSSLYNDAIAN 428 (438)
T ss_dssp HH-----HHHHHHHHHHHHHHHT
T ss_pred HH-----HHHHHHHHHHHHHhhh
Confidence 11 1123345555555543
No 29
>3dzc_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, in diseases, isomerase, center for structural genomics of INFE diseases, csgid; 2.35A {Vibrio cholerae}
Probab=99.21 E-value=1.2e-10 Score=114.47 Aligned_cols=85 Identities=13% Similarity=0.116 Sum_probs=62.5
Q ss_pred CCCceeeccCH---HHHHhcccccccccccCchhHHHHhhcCCceecCCccchhhhhHHHHhhhhceeeeccCCCCHHHH
Q 011792 347 ERGCIVSWAPQ---EEVLAHQAIGGFLTHSGWNSTLESMVAGVPMICWPQVGDQQVNSRCVSEIWKIGFDMKDTCDRSTI 423 (477)
Q Consensus 347 ~nv~~~~~~p~---~~ll~~~~~~~~I~HGG~gs~~eal~~GvP~l~~P~~~DQ~~na~rv~~~~G~G~~l~~~~~~~~l 423 (477)
+++.+.+++++ ..+++.+++ +|+-+| |.+.||.++|+|+|+..-..+++. .+ + .|.++.+.. ++++|
T Consensus 288 ~~v~~~~~lg~~~~~~l~~~ad~--vv~~SG-g~~~EA~a~G~PvV~~~~~~~~~e---~v-~-~G~~~lv~~--d~~~l 357 (396)
T 3dzc_A 288 SNIVLIEPQQYLPFVYLMDRAHI--ILTDSG-GIQEEAPSLGKPVLVMRETTERPE---AV-A-AGTVKLVGT--NQQQI 357 (396)
T ss_dssp TTEEEECCCCHHHHHHHHHHCSE--EEESCS-GGGTTGGGGTCCEEECCSSCSCHH---HH-H-HTSEEECTT--CHHHH
T ss_pred CCEEEeCCCCHHHHHHHHHhcCE--EEECCc-cHHHHHHHcCCCEEEccCCCcchH---HH-H-cCceEEcCC--CHHHH
Confidence 57888777753 457778887 999987 666899999999999855555432 23 5 587765532 79999
Q ss_pred HHHHHHHHhHhHHHHHHHHH
Q 011792 424 EKLVRDLMDNKRDKIMESTV 443 (477)
Q Consensus 424 ~~~v~~ll~~~~~~~~~~a~ 443 (477)
.+++.++++| +..+++..
T Consensus 358 ~~ai~~ll~d--~~~~~~m~ 375 (396)
T 3dzc_A 358 CDALSLLLTD--PQAYQAMS 375 (396)
T ss_dssp HHHHHHHHHC--HHHHHHHH
T ss_pred HHHHHHHHcC--HHHHHHHh
Confidence 9999999998 65544333
No 30
>3ot5_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, center for structural genomics of infec diseases, csgid, alpha beta; HET: PGE; 2.20A {Listeria monocytogenes}
Probab=99.21 E-value=1.1e-10 Score=114.94 Aligned_cols=85 Identities=19% Similarity=0.195 Sum_probs=64.4
Q ss_pred CCCceeeccCH---HHHHhcccccccccccCchhHHHHhhcCCceecCCccchhhhhHHHHhhhhceeeeccCCCCHHHH
Q 011792 347 ERGCIVSWAPQ---EEVLAHQAIGGFLTHSGWNSTLESMVAGVPMICWPQVGDQQVNSRCVSEIWKIGFDMKDTCDRSTI 423 (477)
Q Consensus 347 ~nv~~~~~~p~---~~ll~~~~~~~~I~HGG~gs~~eal~~GvP~l~~P~~~DQ~~na~rv~~~~G~G~~l~~~~~~~~l 423 (477)
+++.+.+++++ ..+++.+++ +|+-+|..+ .||.++|+|+|++|-..++++. + + .|.|+.+. .++++|
T Consensus 282 ~~v~l~~~l~~~~~~~l~~~ad~--vv~~SGg~~-~EA~a~g~PvV~~~~~~~~~e~---v-~-~g~~~lv~--~d~~~l 351 (403)
T 3ot5_A 282 ERIHLIEPLDAIDFHNFLRKSYL--VFTDSGGVQ-EEAPGMGVPVLVLRDTTERPEG---I-E-AGTLKLIG--TNKENL 351 (403)
T ss_dssp TTEEEECCCCHHHHHHHHHHEEE--EEECCHHHH-HHGGGTTCCEEECCSSCSCHHH---H-H-HTSEEECC--SCHHHH
T ss_pred CCEEEeCCCCHHHHHHHHHhcCE--EEECCccHH-HHHHHhCCCEEEecCCCcchhh---e-e-CCcEEEcC--CCHHHH
Confidence 58888898874 347888887 998875333 7999999999999766666542 3 5 58887764 389999
Q ss_pred HHHHHHHHhHhHHHHHHHHH
Q 011792 424 EKLVRDLMDNKRDKIMESTV 443 (477)
Q Consensus 424 ~~~v~~ll~~~~~~~~~~a~ 443 (477)
.+++.++++| +..+++..
T Consensus 352 ~~ai~~ll~~--~~~~~~m~ 369 (403)
T 3ot5_A 352 IKEALDLLDN--KESHDKMA 369 (403)
T ss_dssp HHHHHHHHHC--HHHHHHHH
T ss_pred HHHHHHHHcC--HHHHHHHH
Confidence 9999999997 65554433
No 31
>1vgv_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, isomerase; HET: UD1; 2.31A {Escherichia coli} SCOP: c.87.1.3 PDB: 1f6d_A*
Probab=99.21 E-value=2.3e-10 Score=112.07 Aligned_cols=134 Identities=12% Similarity=0.136 Sum_probs=84.1
Q ss_pred CCcEEEEEecCcccCCHHHHHHHHHHHHh----C-CCcEEEEEecCCcCCCCCCCCCchhhHhh--hcCCCceeeccCH-
Q 011792 286 SRSVLYVSFGSFIKLSGDQILEFWHGIVN----S-GKGFLWVIRSDLIDGESGVGPVPAELDQG--TKERGCIVSWAPQ- 357 (477)
Q Consensus 286 ~~~~v~vs~Gs~~~~~~~~~~~~~~a~~~----~-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~--~~~nv~~~~~~p~- 357 (477)
++++|+++.|...... ..+..+++++.. . +.++++..+.. ......+.+. ..+++.+.+++++
T Consensus 204 ~~~~vl~~~gr~~~~~-kg~~~li~a~~~l~~~~~~~~l~i~~g~~--------~~~~~~l~~~~~~~~~v~~~g~~~~~ 274 (384)
T 1vgv_A 204 DKKMILVTGHRRESFG-RGFEEICHALADIATTHQDIQIVYPVHLN--------PNVREPVNRILGHVKNVILIDPQEYL 274 (384)
T ss_dssp TSEEEEEECCCBSSCC-HHHHHHHHHHHHHHHHCTTEEEEEECCBC--------HHHHHHHHHHHTTCTTEEEECCCCHH
T ss_pred CCCEEEEEeCCccccc-hHHHHHHHHHHHHHhhCCCeEEEEEcCCC--------HHHHHHHHHHhhcCCCEEEeCCCCHH
Confidence 4567888888765321 223444444433 2 33444433210 0011122111 1258888777765
Q ss_pred --HHHHhcccccccccccCchhHHHHhhcCCceecCCccchhhhhHHHHhhhhceeeeccCCCCHHHHHHHHHHHHhHhH
Q 011792 358 --EEVLAHQAIGGFLTHSGWNSTLESMVAGVPMICWPQVGDQQVNSRCVSEIWKIGFDMKDTCDRSTIEKLVRDLMDNKR 435 (477)
Q Consensus 358 --~~ll~~~~~~~~I~HGG~gs~~eal~~GvP~l~~P~~~DQ~~na~rv~~~~G~G~~l~~~~~~~~l~~~v~~ll~~~~ 435 (477)
..++..+++ +|+.+| |++.||+++|+|+|+.+...+..+ +.+ .|.|..++. ++++|.+++.++++|
T Consensus 275 ~~~~~~~~ad~--~v~~Sg-~~~lEA~a~G~PvI~~~~~~~~~e----~v~-~g~g~lv~~--d~~~la~~i~~ll~d-- 342 (384)
T 1vgv_A 275 PFVWLMNHAWL--ILTDSG-GIQEEAPSLGKPVLVMRDTTERPE----AVT-AGTVRLVGT--DKQRIVEEVTRLLKD-- 342 (384)
T ss_dssp HHHHHHHHCSE--EEESSS-TGGGTGGGGTCCEEEESSCCSCHH----HHH-HTSEEEECS--SHHHHHHHHHHHHHC--
T ss_pred HHHHHHHhCcE--EEECCc-chHHHHHHcCCCEEEccCCCCcch----hhh-CCceEEeCC--CHHHHHHHHHHHHhC--
Confidence 447888887 999885 458899999999999987544333 335 588887754 899999999999997
Q ss_pred HHHHH
Q 011792 436 DKIME 440 (477)
Q Consensus 436 ~~~~~ 440 (477)
+..++
T Consensus 343 ~~~~~ 347 (384)
T 1vgv_A 343 ENEYQ 347 (384)
T ss_dssp HHHHH
T ss_pred hHHHh
Confidence 54443
No 32
>2gek_A Phosphatidylinositol mannosyltransferase (PIMA); GT4 glycosyltransferase, rossmann fold, complex; HET: GDP; 2.40A {Mycobacterium smegmatis} PDB: 2gej_A*
Probab=99.18 E-value=1.3e-08 Score=100.09 Aligned_cols=80 Identities=9% Similarity=0.118 Sum_probs=60.4
Q ss_pred cCCCceeeccCHH---HHHhccccccccc----ccCc-hhHHHHhhcCCceecCCccchhhhhHHHHhhhhceeeeccCC
Q 011792 346 KERGCIVSWAPQE---EVLAHQAIGGFLT----HSGW-NSTLESMVAGVPMICWPQVGDQQVNSRCVSEIWKIGFDMKDT 417 (477)
Q Consensus 346 ~~nv~~~~~~p~~---~ll~~~~~~~~I~----HGG~-gs~~eal~~GvP~l~~P~~~DQ~~na~rv~~~~G~G~~l~~~ 417 (477)
.+|+.+.+++++. .++..+++ +|. +.|+ .++.||+++|+|+|+.+. ......+ +.-+.|... ..
T Consensus 262 ~~~v~~~g~~~~~~~~~~~~~adv--~v~ps~~~e~~~~~~~Ea~a~G~PvI~~~~----~~~~e~i-~~~~~g~~~-~~ 333 (406)
T 2gek_A 262 AGHLRFLGQVDDATKASAMRSADV--YCAPHLGGESFGIVLVEAMAAGTAVVASDL----DAFRRVL-ADGDAGRLV-PV 333 (406)
T ss_dssp GGGEEECCSCCHHHHHHHHHHSSE--EEECCCSCCSSCHHHHHHHHHTCEEEECCC----HHHHHHH-TTTTSSEEC-CT
T ss_pred cCcEEEEecCCHHHHHHHHHHCCE--EEecCCCCCCCchHHHHHHHcCCCEEEecC----CcHHHHh-cCCCceEEe-CC
Confidence 5689999999975 58888887 663 3344 489999999999999865 3445555 323566666 33
Q ss_pred CCHHHHHHHHHHHHhH
Q 011792 418 CDRSTIEKLVRDLMDN 433 (477)
Q Consensus 418 ~~~~~l~~~v~~ll~~ 433 (477)
-+.+++.++|.++++|
T Consensus 334 ~d~~~l~~~i~~l~~~ 349 (406)
T 2gek_A 334 DDADGMAAALIGILED 349 (406)
T ss_dssp TCHHHHHHHHHHHHHC
T ss_pred CCHHHHHHHHHHHHcC
Confidence 5899999999999987
No 33
>2jjm_A Glycosyl transferase, group 1 family protein; anthrax, nucleotide, carbohydrate; 3.10A {Bacillus anthracis} PDB: 3mbo_A*
Probab=99.13 E-value=3.1e-08 Score=97.12 Aligned_cols=317 Identities=15% Similarity=0.125 Sum_probs=160.0
Q ss_pred CCEEEEEcCCCC-CCHHHHHHHHHHHHhCCCeEEEEeCCccchhccCCCcccccccCCCCeEEEeCCCC-CCCCCCCCCC
Q 011792 6 VPHVVLLPFPAY-GHIKPMLSLAKLFSHAGFRITFVNTDQYHDRLFGNTDVTAFYKHFPNFLCTSIPDG-LPPDNPRFGI 83 (477)
Q Consensus 6 ~~~il~~~~~~~-GHv~p~l~La~~L~~rGH~Vt~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~ 83 (477)
++++....+|.. |.-.-...|++.|+++||+|++++...... .. ...+++.+..++.. ++...
T Consensus 15 ~~~~~~~~~p~~GG~~~~~~~la~~L~~~G~~V~v~~~~~~~~-~~---------~~~~~i~~~~~~~~~~~~~~----- 79 (394)
T 2jjm_A 15 KLKIGITCYPSVGGSGVVGTELGKQLAERGHEIHFITSGLPFR-LN---------KVYPNIYFHEVTVNQYSVFQ----- 79 (394)
T ss_dssp CCEEEEECCC--CHHHHHHHHHHHHHHHTTCEEEEECSSCC--------------CCCTTEEEECCCCC----CC-----
T ss_pred eeeeehhcCCCCCCHHHHHHHHHHHHHhCCCEEEEEeCCCCCc-cc---------ccCCceEEEecccccccccc-----
Confidence 788888888876 455678899999999999999999743211 10 11223555555421 11000
Q ss_pred ChHHHHHhhchhcHHHHHHHHhcCCCCCeEEEECCCcch--HHHHHHH-c--CCCeEEEccCchhhHHHHhhhhhhhhcC
Q 011792 84 YTKDWFCSNKPVSKLAFRQLLMTPGRLPTCIISDSIMSF--AIDVAEE-L--NIPIITFRPYSAYCSWSDFHFSKLAEEG 158 (477)
Q Consensus 84 ~~~~~~~~~~~~~~~~l~~~l~~~~~~~D~vI~D~~~~~--~~~~A~~-l--giP~v~~~~~~~~~~~~~~~~~~~~~~~ 158 (477)
.....+ .....+..++++. +||+|++...... ...++.. + ++|+|......... .
T Consensus 80 ~~~~~~-----~~~~~l~~~l~~~--~~Dvv~~~~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~----~--------- 139 (394)
T 2jjm_A 80 YPPYDL-----ALASKMAEVAQRE--NLDILHVHYAIPHAICAYLAKQMIGERIKIVTTLHGTDIT----V--------- 139 (394)
T ss_dssp SCCHHH-----HHHHHHHHHHHHH--TCSEEEECSSTTHHHHHHHHHHHTTTCSEEEEECCHHHHH----T---------
T ss_pred cccccH-----HHHHHHHHHHHHc--CCCEEEEcchhHHHHHHHHHHHhhcCCCCEEEEEecCccc----c---------
Confidence 000011 1123455666654 8999999754432 2334443 3 59988754321100 0
Q ss_pred CCCCCCCCCCCCceecCCCCCCCCCCCCCccccCCCCCChHHHHHHHhhhcccCCceEEEcChhhhchHHHHHhhhcCCc
Q 011792 159 ELPVTDENFDKPVTCIPELENIFRNRDLPSICRHGGPDDPILQTFIRDTSATTRTSALVINTFNEIEGPIISKLGSRLTK 238 (477)
Q Consensus 159 ~~p~~~~~~~~~~~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ns~~~le~p~l~~~~~~~p~ 238 (477)
. +... . .....+.. ...++.+++.|....+.- .... ....+
T Consensus 140 ---------------~-~~~~---------------~----~~~~~~~~--~~~ad~ii~~s~~~~~~~-~~~~-~~~~~ 180 (394)
T 2jjm_A 140 ---------------L-GSDP---------------S----LNNLIRFG--IEQSDVVTAVSHSLINET-HELV-KPNKD 180 (394)
T ss_dssp ---------------T-TTCT---------------T----THHHHHHH--HHHSSEEEESCHHHHHHH-HHHT-CCSSC
T ss_pred ---------------c-CCCH---------------H----HHHHHHHH--HhhCCEEEECCHHHHHHH-HHhh-CCccc
Confidence 0 0000 0 00111111 256788888885432211 1111 11235
Q ss_pred eeEeCccccccccccccccccCCCCccCcccCccccccccccccCCCCCcEEEEEecCccc-CCHHHHHHHHHHHHh-CC
Q 011792 239 IYTVGPLHALLKSRIQEDSVESSPLESNNCVLSKEDRSCMTWLGSQPSRSVLYVSFGSFIK-LSGDQILEFWHGIVN-SG 316 (477)
Q Consensus 239 ~~~vG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~Gs~~~-~~~~~~~~~~~a~~~-~~ 316 (477)
+..|..-..... .. . ....++.+-+. .+++..+++..|.... ...+.+-..+..+.. .+
T Consensus 181 ~~vi~ngv~~~~----------~~-----~---~~~~~~~~~~~-~~~~~~~i~~~G~~~~~Kg~~~li~a~~~l~~~~~ 241 (394)
T 2jjm_A 181 IQTVYNFIDERV----------YF-----K---RDMTQLKKEYG-ISESEKILIHISNFRKVKRVQDVVQAFAKIVTEVD 241 (394)
T ss_dssp EEECCCCCCTTT----------CC-----C---CCCHHHHHHTT-CC---CEEEEECCCCGGGTHHHHHHHHHHHHHSSC
T ss_pred EEEecCCccHHh----------cC-----C---cchHHHHHHcC-CCCCCeEEEEeeccccccCHHHHHHHHHHHHhhCC
Confidence 666654332111 10 0 00111111121 1123356667788753 333333333333333 23
Q ss_pred CcEEEEEecCCcCCCCCCCCCchhhHhh-----hcCCCceeeccC-HHHHHhcccccccc----cccCchhHHHHhhcCC
Q 011792 317 KGFLWVIRSDLIDGESGVGPVPAELDQG-----TKERGCIVSWAP-QEEVLAHQAIGGFL----THSGWNSTLESMVAGV 386 (477)
Q Consensus 317 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~-----~~~nv~~~~~~p-~~~ll~~~~~~~~I----~HGG~gs~~eal~~Gv 386 (477)
.++ +.++. | .....+.+. ..++|.+.++.. -..++..+++ +| .-|...++.||+++|+
T Consensus 242 ~~l-~i~G~------g---~~~~~l~~~~~~~~l~~~v~~~g~~~~~~~~~~~adv--~v~ps~~e~~~~~~~EAma~G~ 309 (394)
T 2jjm_A 242 AKL-LLVGD------G---PEFCTILQLVKNLHIEDRVLFLGKQDNVAELLAMSDL--MLLLSEKESFGLVLLEAMACGV 309 (394)
T ss_dssp CEE-EEECC------C---TTHHHHHHHHHTTTCGGGBCCCBSCSCTHHHHHTCSE--EEECCSCCSCCHHHHHHHHTTC
T ss_pred CEE-EEECC------c---hHHHHHHHHHHHcCCCCeEEEeCchhhHHHHHHhCCE--EEeccccCCCchHHHHHHhcCC
Confidence 433 33421 1 111222211 246788888755 3468888887 77 5566789999999999
Q ss_pred ceecCCccchhhhhHHHHhhhhceeeeccCCCCHHHHHHHHHHHHhH
Q 011792 387 PMICWPQVGDQQVNSRCVSEIWKIGFDMKDTCDRSTIEKLVRDLMDN 433 (477)
Q Consensus 387 P~l~~P~~~DQ~~na~rv~~~~G~G~~l~~~~~~~~l~~~v~~ll~~ 433 (477)
|+|+.+.. .....+ +.-+.|...+ .-+.+++.+++.++++|
T Consensus 310 PvI~~~~~----~~~e~v-~~~~~g~~~~-~~d~~~la~~i~~l~~~ 350 (394)
T 2jjm_A 310 PCIGTRVG----GIPEVI-QHGDTGYLCE-VGDTTGVADQAIQLLKD 350 (394)
T ss_dssp CEEEECCT----TSTTTC-CBTTTEEEEC-TTCHHHHHHHHHHHHHC
T ss_pred CEEEecCC----ChHHHh-hcCCceEEeC-CCCHHHHHHHHHHHHcC
Confidence 99997653 223333 3234666663 34899999999999997
No 34
>3beo_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, allosteric, regulation, isomerase; HET: UD1 UDP; 1.70A {Bacillus anthracis} PDB: 1o6c_A
Probab=99.11 E-value=1.2e-09 Score=106.42 Aligned_cols=83 Identities=20% Similarity=0.206 Sum_probs=61.5
Q ss_pred CCCceeeccCHH---HHHhcccccccccccCchhHHHHhhcCCceecCCccchhhhhHHHHhhhhceeeeccCCCCHHHH
Q 011792 347 ERGCIVSWAPQE---EVLAHQAIGGFLTHSGWNSTLESMVAGVPMICWPQVGDQQVNSRCVSEIWKIGFDMKDTCDRSTI 423 (477)
Q Consensus 347 ~nv~~~~~~p~~---~ll~~~~~~~~I~HGG~gs~~eal~~GvP~l~~P~~~DQ~~na~rv~~~~G~G~~l~~~~~~~~l 423 (477)
+++.+.+++++. .++..+++ +|+.+| +++.||+++|+|+|+........ ..+ + .|.|..++. +.++|
T Consensus 263 ~~v~~~g~~~~~~~~~~~~~ad~--~v~~sg-~~~lEA~a~G~Pvi~~~~~~~~~---e~v-~-~g~g~~v~~--d~~~l 332 (375)
T 3beo_A 263 GRIHLIEPLDVIDFHNVAARSYL--MLTDSG-GVQEEAPSLGVPVLVLRDTTERP---EGI-E-AGTLKLAGT--DEETI 332 (375)
T ss_dssp TTEEEECCCCHHHHHHHHHTCSE--EEECCH-HHHHHHHHHTCCEEECSSCCSCH---HHH-H-TTSEEECCS--CHHHH
T ss_pred CCEEEeCCCCHHHHHHHHHhCcE--EEECCC-ChHHHHHhcCCCEEEecCCCCCc---eee-c-CCceEEcCC--CHHHH
Confidence 588887877754 47777777 898873 56889999999999985433332 223 5 588877753 89999
Q ss_pred HHHHHHHHhHhHHHHHHH
Q 011792 424 EKLVRDLMDNKRDKIMES 441 (477)
Q Consensus 424 ~~~v~~ll~~~~~~~~~~ 441 (477)
.+++.++++| +..+++
T Consensus 333 a~~i~~ll~~--~~~~~~ 348 (375)
T 3beo_A 333 FSLADELLSD--KEAHDK 348 (375)
T ss_dssp HHHHHHHHHC--HHHHHH
T ss_pred HHHHHHHHhC--hHhHhh
Confidence 9999999997 654443
No 35
>2r60_A Glycosyl transferase, group 1; rossmann-fold; 1.80A {Halothermothrix orenii} PDB: 2r66_A* 2r68_A*
Probab=99.08 E-value=1.9e-08 Score=102.13 Aligned_cols=80 Identities=15% Similarity=0.172 Sum_probs=58.5
Q ss_pred cCCCceeeccCHHH---HHhcc----cccccccc----cCchhHHHHhhcCCceecCCccchhhhhHHHHhhhhceeeec
Q 011792 346 KERGCIVSWAPQEE---VLAHQ----AIGGFLTH----SGWNSTLESMVAGVPMICWPQVGDQQVNSRCVSEIWKIGFDM 414 (477)
Q Consensus 346 ~~nv~~~~~~p~~~---ll~~~----~~~~~I~H----GG~gs~~eal~~GvP~l~~P~~~DQ~~na~rv~~~~G~G~~l 414 (477)
.++|.+.+++|+.+ ++..+ ++ +|.- |-..++.||+++|+|+|+... ......+ +.-..|..+
T Consensus 334 ~~~V~~~G~v~~~~~~~~~~~a~~~~dv--~v~pS~~Eg~~~~~lEAma~G~PvI~s~~----~g~~e~v-~~~~~g~l~ 406 (499)
T 2r60_A 334 RGKVSMFPLNSQQELAGCYAYLASKGSV--FALTSFYEPFGLAPVEAMASGLPAVVTRN----GGPAEIL-DGGKYGVLV 406 (499)
T ss_dssp BTTEEEEECCSHHHHHHHHHHHHHTTCE--EEECCSCBCCCSHHHHHHHTTCCEEEESS----BHHHHHT-GGGTSSEEE
T ss_pred CceEEECCCCCHHHHHHHHHhcCcCCCE--EEECcccCCCCcHHHHHHHcCCCEEEecC----CCHHHHh-cCCceEEEe
Confidence 56899999998665 67777 77 6632 334689999999999999863 2344444 322367666
Q ss_pred cCCCCHHHHHHHHHHHHhH
Q 011792 415 KDTCDRSTIEKLVRDLMDN 433 (477)
Q Consensus 415 ~~~~~~~~l~~~v~~ll~~ 433 (477)
+ .-+.++++++|.++++|
T Consensus 407 ~-~~d~~~la~~i~~ll~~ 424 (499)
T 2r60_A 407 D-PEDPEDIARGLLKAFES 424 (499)
T ss_dssp C-TTCHHHHHHHHHHHHSC
T ss_pred C-CCCHHHHHHHHHHHHhC
Confidence 3 35899999999999987
No 36
>2iuy_A Avigt4, glycosyltransferase; antibiotics, family GT-4, avilamycin A; HET: MES; 2.1A {Streptomyces viridochromogenes} PDB: 2iv3_A*
Probab=99.07 E-value=2.5e-09 Score=102.93 Aligned_cols=125 Identities=13% Similarity=0.052 Sum_probs=78.2
Q ss_pred EEEEecCcccCCHHHHHHHHHHHHhCCCcEEEEEecCCcCCCCCCCCCchhhHhhhcCCCceeeccCHH---HHHhcccc
Q 011792 290 LYVSFGSFIKLSGDQILEFWHGIVNSGKGFLWVIRSDLIDGESGVGPVPAELDQGTKERGCIVSWAPQE---EVLAHQAI 366 (477)
Q Consensus 290 v~vs~Gs~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~~p~~---~ll~~~~~ 366 (477)
+++..|.... ..-...++++++..+.++++.-. |.....-..+.++..+|+.+.+|+++. .++..+++
T Consensus 164 ~i~~vG~~~~--~Kg~~~li~a~~~~~~~l~i~G~-------g~~~~~l~~~~~~~~~~v~~~g~~~~~~l~~~~~~adv 234 (342)
T 2iuy_A 164 FLLFMGRVSP--HKGALEAAAFAHACGRRLVLAGP-------AWEPEYFDEITRRYGSTVEPIGEVGGERRLDLLASAHA 234 (342)
T ss_dssp CEEEESCCCG--GGTHHHHHHHHHHHTCCEEEESC-------CCCHHHHHHHHHHHTTTEEECCCCCHHHHHHHHHHCSE
T ss_pred EEEEEecccc--ccCHHHHHHHHHhcCcEEEEEeC-------cccHHHHHHHHHHhCCCEEEeccCCHHHHHHHHHhCCE
Confidence 4555677652 23344555666666666554432 210011112222334799999999976 58888887
Q ss_pred ccccc-------------ccC-chhHHHHhhcCCceecCCccchhhhhHHHHhhh--hceeeeccCCCCHHHHHHHHHHH
Q 011792 367 GGFLT-------------HSG-WNSTLESMVAGVPMICWPQVGDQQVNSRCVSEI--WKIGFDMKDTCDRSTIEKLVRDL 430 (477)
Q Consensus 367 ~~~I~-------------HGG-~gs~~eal~~GvP~l~~P~~~DQ~~na~rv~~~--~G~G~~l~~~~~~~~l~~~v~~l 430 (477)
+|. +-| ..++.||+++|+|+|+... ......+ +. -+.|...+ . +.+++.++|.++
T Consensus 235 --~v~ps~~~~~~~~~~~~E~~~~~~~EAma~G~PvI~s~~----~~~~e~~-~~~~~~~g~~~~-~-d~~~l~~~i~~l 305 (342)
T 2iuy_A 235 --VLAMSQAVTGPWGGIWCEPGATVVSEAAVSGTPVVGTGN----GCLAEIV-PSVGEVVGYGTD-F-APDEARRTLAGL 305 (342)
T ss_dssp --EEECCCCCCCTTCSCCCCCCCHHHHHHHHTTCCEEECCT----TTHHHHG-GGGEEECCSSSC-C-CHHHHHHHHHTS
T ss_pred --EEECCcccccccccccccCccHHHHHHHhcCCCEEEcCC----CChHHHh-cccCCCceEEcC-C-CHHHHHHHHHHH
Confidence 662 233 4689999999999999875 2344444 42 24566553 4 999999999999
Q ss_pred Hh
Q 011792 431 MD 432 (477)
Q Consensus 431 l~ 432 (477)
++
T Consensus 306 ~~ 307 (342)
T 2iuy_A 306 PA 307 (342)
T ss_dssp CC
T ss_pred HH
Confidence 86
No 37
>2iw1_A Lipopolysaccharide core biosynthesis protein RFAG; transferase, lipopolysaccharide biosynthesis, family GT-4, glycosyltransferase, LPS; HET: U2F; 1.5A {Escherichia coli} SCOP: c.87.1.8 PDB: 2iv7_A*
Probab=99.02 E-value=6.8e-08 Score=93.77 Aligned_cols=136 Identities=13% Similarity=0.204 Sum_probs=87.0
Q ss_pred CCcEEEEEecCcccCCHHHHHHHHHHHHhCCC----cE-EEEEecCCcCCCCCCCCCchhhHh---h--hcCCCceeecc
Q 011792 286 SRSVLYVSFGSFIKLSGDQILEFWHGIVNSGK----GF-LWVIRSDLIDGESGVGPVPAELDQ---G--TKERGCIVSWA 355 (477)
Q Consensus 286 ~~~~v~vs~Gs~~~~~~~~~~~~~~a~~~~~~----~~-i~~~~~~~~~~~~~~~~~~~~~~~---~--~~~nv~~~~~~ 355 (477)
++..+++..|+... ......+++++..... .+ ++.++. |. ...+.+ + ..+|+.+.++.
T Consensus 194 ~~~~~i~~~G~~~~--~K~~~~li~a~~~l~~~~~~~~~l~i~G~------g~----~~~~~~~~~~~~~~~~v~~~g~~ 261 (374)
T 2iw1_A 194 EQQNLLLQVGSDFG--RKGVDRSIEALASLPESLRHNTLLFVVGQ------DK----PRKFEALAEKLGVRSNVHFFSGR 261 (374)
T ss_dssp TTCEEEEEECSCTT--TTTHHHHHHHHHTSCHHHHHTEEEEEESS------SC----CHHHHHHHHHHTCGGGEEEESCC
T ss_pred CCCeEEEEeccchh--hcCHHHHHHHHHHhHhccCCceEEEEEcC------CC----HHHHHHHHHHcCCCCcEEECCCc
Confidence 34467777887653 2234445566655432 23 344422 21 122221 1 24688888886
Q ss_pred CH-HHHHhccccccccc----ccCchhHHHHhhcCCceecCCccchhhhhHHHHhhhhceeeeccCCCCHHHHHHHHHHH
Q 011792 356 PQ-EEVLAHQAIGGFLT----HSGWNSTLESMVAGVPMICWPQVGDQQVNSRCVSEIWKIGFDMKDTCDRSTIEKLVRDL 430 (477)
Q Consensus 356 p~-~~ll~~~~~~~~I~----HGG~gs~~eal~~GvP~l~~P~~~DQ~~na~rv~~~~G~G~~l~~~~~~~~l~~~v~~l 430 (477)
.+ ..++..+++ +|. -|..+++.||+++|+|+|+.+. ..+...+.+ -+.|..++..-+.+++.+++.++
T Consensus 262 ~~~~~~~~~ad~--~v~ps~~e~~~~~~~Ea~a~G~Pvi~~~~----~~~~e~i~~-~~~g~~~~~~~~~~~l~~~i~~l 334 (374)
T 2iw1_A 262 NDVSELMAAADL--LLHPAYQEAAGIVLLEAITAGLPVLTTAV----CGYAHYIAD-ANCGTVIAEPFSQEQLNEVLRKA 334 (374)
T ss_dssp SCHHHHHHHCSE--EEECCSCCSSCHHHHHHHHHTCCEEEETT----STTTHHHHH-HTCEEEECSSCCHHHHHHHHHHH
T ss_pred ccHHHHHHhcCE--EEeccccCCcccHHHHHHHCCCCEEEecC----CCchhhhcc-CCceEEeCCCCCHHHHHHHHHHH
Confidence 53 458888887 775 4667899999999999999765 344555633 57888875457899999999999
Q ss_pred HhHhHHHHHHHH
Q 011792 431 MDNKRDKIMEST 442 (477)
Q Consensus 431 l~~~~~~~~~~a 442 (477)
++| +..+++.
T Consensus 335 ~~~--~~~~~~~ 344 (374)
T 2iw1_A 335 LTQ--SPLRMAW 344 (374)
T ss_dssp HHC--HHHHHHH
T ss_pred HcC--hHHHHHH
Confidence 987 5544433
No 38
>4hwg_A UDP-N-acetylglucosamine 2-epimerase; ssgcid, structural genomics, seattle structural genomics center for infectious disease, isomerase; 2.00A {Rickettsia bellii}
Probab=98.90 E-value=1.5e-08 Score=98.77 Aligned_cols=314 Identities=11% Similarity=0.051 Sum_probs=165.2
Q ss_pred CCEEEEEcCCCCCCHHHHHHHHHHHHhCCCeEEEEeCCccch-hccCCCcccccccCCCCeEEEeCC--CC-CCCCCCCC
Q 011792 6 VPHVVLLPFPAYGHIKPMLSLAKLFSHAGFRITFVNTDQYHD-RLFGNTDVTAFYKHFPNFLCTSIP--DG-LPPDNPRF 81 (477)
Q Consensus 6 ~~~il~~~~~~~GHv~p~l~La~~L~~rGH~Vt~~~~~~~~~-~l~~~~~~~~~~~~~~~~~~~~l~--~~-~~~~~~~~ 81 (477)
.++++++ .|++-...=+.+|.++|.++ +++.++.+....+ .+.+.- ++...++ +. +...
T Consensus 9 ~~~~~~v-~GtRpe~~k~~p~~~~l~~~-~~~~~~~tgqh~~~~~~~~~-----------~~~~~i~~~~~~l~~~---- 71 (385)
T 4hwg_A 9 MLKVMTI-VGTRPELIKLCCVISEFDKH-TKHILVHTGQNYAYELNQVF-----------FDDMGIRKPDYFLEVA---- 71 (385)
T ss_dssp CCEEEEE-ECSHHHHHHHHHHHHHHHHH-SEEEEEECSCHHHHHHTHHH-----------HC-CCCCCCSEECCCC----
T ss_pred hhheeEE-EEcCHhHHHHHHHHHHHHhc-CCEEEEEeCCCCChhHHHHH-----------HhhCCCCCCceecCCC----
Confidence 4666554 56777788888888999877 8877776643322 222200 0111111 10 1111
Q ss_pred CCChHHHHHhhchhcHHHHHHHHhcCCCCCeEEEECC--CcchHHHHHHHcCCCeEEEccCchhhHHHHhhhhhhhhcCC
Q 011792 82 GIYTKDWFCSNKPVSKLAFRQLLMTPGRLPTCIISDS--IMSFAIDVAEELNIPIITFRPYSAYCSWSDFHFSKLAEEGE 159 (477)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~D~vI~D~--~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~~ 159 (477)
..+....... ....+.+++++. +||+|++-. .+.+++.+|.++|||++.+....
T Consensus 72 ~~~~~~~~~~----~~~~l~~~l~~~--kPD~Vlv~gd~~~~~aalaA~~~~IPv~h~eagl------------------ 127 (385)
T 4hwg_A 72 ADNTAKSIGL----VIEKVDEVLEKE--KPDAVLFYGDTNSCLSAIAAKRRKIPIFHMEAGN------------------ 127 (385)
T ss_dssp CCCSHHHHHH----HHHHHHHHHHHH--CCSEEEEESCSGGGGGHHHHHHTTCCEEEESCCC------------------
T ss_pred CCCHHHHHHH----HHHHHHHHHHhc--CCcEEEEECCchHHHHHHHHHHhCCCEEEEeCCC------------------
Confidence 1122222222 334567777766 999998843 33345889999999976642110
Q ss_pred CCCCCCCCCCCceecCCCCCCCCCCCCCccccCCCCCChHHHHHHHhhhcccCCceEEEcChhhhchHHHHHhhhcC-Cc
Q 011792 160 LPVTDENFDKPVTCIPELENIFRNRDLPSICRHGGPDDPILQTFIRDTSATTRTSALVINTFNEIEGPIISKLGSRL-TK 238 (477)
Q Consensus 160 ~p~~~~~~~~~~~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ns~~~le~p~l~~~~~~~-p~ 238 (477)
+..+ ..++. ...+.. .. .-++.+++.+-..-+. +..- ... .+
T Consensus 128 ----------------rs~~----~~~pe---------e~nR~~---~~--~~a~~~~~~te~~~~~--l~~~-G~~~~~ 170 (385)
T 4hwg_A 128 ----------------RCFD----QRVPE---------EINRKI---ID--HISDVNITLTEHARRY--LIAE-GLPAEL 170 (385)
T ss_dssp ----------------CCSC----TTSTH---------HHHHHH---HH--HHCSEEEESSHHHHHH--HHHT-TCCGGG
T ss_pred ----------------cccc----ccCcH---------HHHHHH---HH--hhhceeecCCHHHHHH--HHHc-CCCcCc
Confidence 0000 00000 011111 11 2355666666332111 1000 111 36
Q ss_pred eeEeCccccccccccccccccCCCCccCcccCccccccccccccCCCCCcEEEEEecCcccCC-HHHHHHHHHHHHhC--
Q 011792 239 IYTVGPLHALLKSRIQEDSVESSPLESNNCVLSKEDRSCMTWLGSQPSRSVLYVSFGSFIKLS-GDQILEFWHGIVNS-- 315 (477)
Q Consensus 239 ~~~vG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~Gs~~~~~-~~~~~~~~~a~~~~-- 315 (477)
++++|-...+.-.. ..+ . ....++.+-++- +.++.|+++.|...... ...+..+++++...
T Consensus 171 I~vtGnp~~D~~~~-------~~~-----~---~~~~~~~~~lgl-~~~~~iLvt~hr~e~~~~~~~l~~ll~al~~l~~ 234 (385)
T 4hwg_A 171 TFKSGSHMPEVLDR-------FMP-----K---ILKSDILDKLSL-TPKQYFLISSHREENVDVKNNLKELLNSLQMLIK 234 (385)
T ss_dssp EEECCCSHHHHHHH-------HHH-----H---HHHCCHHHHTTC-CTTSEEEEEECCC-----CHHHHHHHHHHHHHHH
T ss_pred EEEECCchHHHHHH-------hhh-----h---cchhHHHHHcCC-CcCCEEEEEeCCchhcCcHHHHHHHHHHHHHHHh
Confidence 88888544331100 000 0 001112222332 23568888887764332 24455666666543
Q ss_pred --CCcEEEEEecCCcCCCCCCCCCchhhHhh-----hcCCCceeeccCH---HHHHhcccccccccccCchhHHHHhhcC
Q 011792 316 --GKGFLWVIRSDLIDGESGVGPVPAELDQG-----TKERGCIVSWAPQ---EEVLAHQAIGGFLTHSGWNSTLESMVAG 385 (477)
Q Consensus 316 --~~~~i~~~~~~~~~~~~~~~~~~~~~~~~-----~~~nv~~~~~~p~---~~ll~~~~~~~~I~HGG~gs~~eal~~G 385 (477)
+..+|+.... .....+.+. ..+|+++.+.+++ ..+++++++ +|+-+|. .+.||.++|
T Consensus 235 ~~~~~vv~p~~p----------~~~~~l~~~~~~~~~~~~v~l~~~lg~~~~~~l~~~adl--vvt~SGg-v~~EA~alG 301 (385)
T 4hwg_A 235 EYNFLIIFSTHP----------RTKKRLEDLEGFKELGDKIRFLPAFSFTDYVKLQMNAFC--ILSDSGT-ITEEASILN 301 (385)
T ss_dssp HHCCEEEEEECH----------HHHHHHHTSGGGGGTGGGEEECCCCCHHHHHHHHHHCSE--EEECCTT-HHHHHHHTT
T ss_pred cCCeEEEEECCh----------HHHHHHHHHHHHhcCCCCEEEEcCCCHHHHHHHHHhCcE--EEECCcc-HHHHHHHcC
Confidence 5667776521 111111111 1257777666554 458888887 9999876 469999999
Q ss_pred CceecCCccchhhhhHHHHhhhhceeeeccCCCCHHHHHHHHHHHHhH
Q 011792 386 VPMICWPQVGDQQVNSRCVSEIWKIGFDMKDTCDRSTIEKLVRDLMDN 433 (477)
Q Consensus 386 vP~l~~P~~~DQ~~na~rv~~~~G~G~~l~~~~~~~~l~~~v~~ll~~ 433 (477)
+|+|+++-..+.+. .+ + .|.++.+. .+.+.|.+++.++|+|
T Consensus 302 ~Pvv~~~~~ter~e---~v-~-~G~~~lv~--~d~~~i~~ai~~ll~d 342 (385)
T 4hwg_A 302 LPALNIREAHERPE---GM-D-AGTLIMSG--FKAERVLQAVKTITEE 342 (385)
T ss_dssp CCEEECSSSCSCTH---HH-H-HTCCEECC--SSHHHHHHHHHHHHTT
T ss_pred CCEEEcCCCccchh---hh-h-cCceEEcC--CCHHHHHHHHHHHHhC
Confidence 99999987554332 24 5 58776663 4899999999999987
No 39
>3s28_A Sucrose synthase 1; glycosyltransferase, sucrose metabolism, sugar donar complex rossmann fold, GT-B fold, glycosyltansferase, UDP-glucose; HET: UDP LCN NHF; 2.80A {Arabidopsis thaliana} PDB: 3s27_A* 3s29_A*
Probab=98.71 E-value=3.5e-07 Score=96.76 Aligned_cols=78 Identities=14% Similarity=0.157 Sum_probs=51.8
Q ss_pred cCCCceeec----cCHHHHHh----cccccccccc----cCchhHHHHhhcCCceecCCccchhhhhHHHHhhhhceeee
Q 011792 346 KERGCIVSW----APQEEVLA----HQAIGGFLTH----SGWNSTLESMVAGVPMICWPQVGDQQVNSRCVSEIWKIGFD 413 (477)
Q Consensus 346 ~~nv~~~~~----~p~~~ll~----~~~~~~~I~H----GG~gs~~eal~~GvP~l~~P~~~DQ~~na~rv~~~~G~G~~ 413 (477)
.++|.+.++ +|+.++.. .+++ +|.- |-..++.||+++|+|+|+.. .......+ +.-+.|..
T Consensus 639 ~~~V~flG~~~~~v~~~eL~~~~~~aaDv--fV~PS~~EgfglvllEAMA~G~PVIasd----~GG~~EiV-~dg~~Gll 711 (816)
T 3s28_A 639 NGQFRWISSQMDRVRNGELYRYICDTKGA--FVQPALYEAFGLTVVEAMTCGLPTFATC----KGGPAEII-VHGKSGFH 711 (816)
T ss_dssp BBBEEEECCCCCHHHHHHHHHHHHHTTCE--EEECCSCBSSCHHHHHHHHTTCCEEEES----SBTHHHHC-CBTTTBEE
T ss_pred CCcEEEccCccccCCHHHHHHHHHhcCeE--EEECCCccCccHHHHHHHHcCCCEEEeC----CCChHHHH-ccCCcEEE
Confidence 467888874 44555554 3455 6632 34569999999999999963 33344444 32346766
Q ss_pred ccCCCCHHHHHHHHHHHH
Q 011792 414 MKDTCDRSTIEKLVRDLM 431 (477)
Q Consensus 414 l~~~~~~~~l~~~v~~ll 431 (477)
++ .-+.++++++|.+++
T Consensus 712 v~-p~D~e~LA~aI~~lL 728 (816)
T 3s28_A 712 ID-PYHGDQAADTLADFF 728 (816)
T ss_dssp EC-TTSHHHHHHHHHHHH
T ss_pred eC-CCCHHHHHHHHHHHH
Confidence 63 458899999997776
No 40
>2x6q_A Trehalose-synthase TRET; biosynthetic protein; 2.20A {Pyrococcus horikoshii} PDB: 2x6r_A 2xa1_A 2xa2_A* 2xa9_A* 2xmp_A*
Probab=98.69 E-value=2.3e-06 Score=84.35 Aligned_cols=83 Identities=14% Similarity=0.061 Sum_probs=60.1
Q ss_pred cCCCceeeccC---HH---HHHhccccccccccc----CchhHHHHhhcCCceecCCccchhhhhHHHHhhhhceeeecc
Q 011792 346 KERGCIVSWAP---QE---EVLAHQAIGGFLTHS----GWNSTLESMVAGVPMICWPQVGDQQVNSRCVSEIWKIGFDMK 415 (477)
Q Consensus 346 ~~nv~~~~~~p---~~---~ll~~~~~~~~I~HG----G~gs~~eal~~GvP~l~~P~~~DQ~~na~rv~~~~G~G~~l~ 415 (477)
.++|.+.+|++ +. .++..+++ +|.-+ ...++.||+++|+|+|+.+. ..+...+ +.-+.|...+
T Consensus 292 ~~~V~~~G~~~~~~~~~~~~~~~~ad~--~v~ps~~E~~~~~~lEAma~G~PvI~~~~----~g~~e~i-~~~~~g~l~~ 364 (416)
T 2x6q_A 292 DYDVKVLTNLIGVHAREVNAFQRASDV--ILQMSIREGFGLTVTEAMWKGKPVIGRAV----GGIKFQI-VDGETGFLVR 364 (416)
T ss_dssp CTTEEEEEGGGTCCHHHHHHHHHHCSE--EEECCSSCSSCHHHHHHHHTTCCEEEESC----HHHHHHC-CBTTTEEEES
T ss_pred CCcEEEecccCCCCHHHHHHHHHhCCE--EEECCCcCCCccHHHHHHHcCCCEEEccC----CCChhhe-ecCCCeEEEC
Confidence 46889999776 33 37777787 66543 45789999999999999764 3344445 3335677774
Q ss_pred CCCCHHHHHHHHHHHHhHhHHHHHH
Q 011792 416 DTCDRSTIEKLVRDLMDNKRDKIME 440 (477)
Q Consensus 416 ~~~~~~~l~~~v~~ll~~~~~~~~~ 440 (477)
+.+++.++|.++++| +..++
T Consensus 365 ---d~~~la~~i~~ll~~--~~~~~ 384 (416)
T 2x6q_A 365 ---DANEAVEVVLYLLKH--PEVSK 384 (416)
T ss_dssp ---SHHHHHHHHHHHHHC--HHHHH
T ss_pred ---CHHHHHHHHHHHHhC--HHHHH
Confidence 899999999999997 54433
No 41
>1rzu_A Glycogen synthase 1; glycosyl-transferase, GT-B fold, rossmann fold, ADP-binding, transferase; HET: ADP; 2.30A {Agrobacterium tumefaciens} SCOP: c.87.1.8 PDB: 1rzv_A
Probab=98.55 E-value=5.2e-06 Score=83.61 Aligned_cols=126 Identities=12% Similarity=0.060 Sum_probs=74.7
Q ss_pred EEEEEecCccc-CCHHHHHHHHHHHHhCCCcEEEEEecCCcCCCCCCCCCchh---hHhhhcCCCc-eeeccCHH---HH
Q 011792 289 VLYVSFGSFIK-LSGDQILEFWHGIVNSGKGFLWVIRSDLIDGESGVGPVPAE---LDQGTKERGC-IVSWAPQE---EV 360 (477)
Q Consensus 289 ~v~vs~Gs~~~-~~~~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~~~~~~~~---~~~~~~~nv~-~~~~~p~~---~l 360 (477)
.+++..|.... ...+.+-..+..+...+.++++.-.++ . ..... +.++.++++. +.++ +++ .+
T Consensus 292 ~~i~~vGrl~~~Kg~~~li~a~~~l~~~~~~l~ivG~g~-------~-~~~~~l~~~~~~~~~~v~~~~g~-~~~~~~~~ 362 (485)
T 1rzu_A 292 PLFCVISRLTWQKGIDLMAEAVDEIVSLGGRLVVLGAGD-------V-ALEGALLAAASRHHGRVGVAIGY-NEPLSHLM 362 (485)
T ss_dssp CEEEEESCBSTTTTHHHHHTTHHHHHHTTCEEEEEECBC-------H-HHHHHHHHHHHHTTTTEEEEESC-CHHHHHHH
T ss_pred eEEEEEccCccccCHHHHHHHHHHHHhcCceEEEEeCCc-------h-HHHHHHHHHHHhCCCcEEEecCC-CHHHHHHH
Confidence 47778888764 233333333333433355555443211 0 01111 1223346787 5687 543 47
Q ss_pred Hhccccccccc----ccCchhHHHHhhcCCceecCCccchhhhhHHHHhhhh---------ceeeeccCCCCHHHHHHHH
Q 011792 361 LAHQAIGGFLT----HSGWNSTLESMVAGVPMICWPQVGDQQVNSRCVSEIW---------KIGFDMKDTCDRSTIEKLV 427 (477)
Q Consensus 361 l~~~~~~~~I~----HGG~gs~~eal~~GvP~l~~P~~~DQ~~na~rv~~~~---------G~G~~l~~~~~~~~l~~~v 427 (477)
+..+++ +|. -|...++.||+++|+|+|+... ......+ +.- +.|... ..-+.++++++|
T Consensus 363 ~~~adv--~v~pS~~E~~~~~~lEAma~G~PvI~s~~----gg~~e~v-~~~~~~~~~~~~~~G~l~-~~~d~~~la~~i 434 (485)
T 1rzu_A 363 QAGCDA--IIIPSRFEPCGLTQLYALRYGCIPVVART----GGLADTV-IDANHAALASKAATGVQF-SPVTLDGLKQAI 434 (485)
T ss_dssp HHHCSE--EEECCSCCSSCSHHHHHHHHTCEEEEESS----HHHHHHC-CBCCHHHHHTTCCCBEEE-SSCSHHHHHHHH
T ss_pred HhcCCE--EEECcccCCCCHHHHHHHHCCCCEEEeCC----CChhhee-cccccccccccCCcceEe-CCCCHHHHHHHH
Confidence 888887 663 2345689999999999999764 2334444 321 467666 345889999999
Q ss_pred HHHH
Q 011792 428 RDLM 431 (477)
Q Consensus 428 ~~ll 431 (477)
.+++
T Consensus 435 ~~ll 438 (485)
T 1rzu_A 435 RRTV 438 (485)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 9999
No 42
>2qzs_A Glycogen synthase; glycosyl-transferase, GT-B fold, rossmann fold, closed-form, ADP and glucose binding, glycogen biosynthesis; HET: GLC ADP 250; 2.20A {Escherichia coli} PDB: 2r4t_A* 2r4u_A* 3guh_A* 3cx4_A* 3cop_A* 3d1j_A
Probab=98.50 E-value=1.4e-05 Score=80.36 Aligned_cols=129 Identities=11% Similarity=0.119 Sum_probs=74.2
Q ss_pred CcEEEEEecCccc-CCHHHHHHHHHHHHhCCCcEEEEEecCCcCCCCCCCCCchh---hHhhhcCCCc-eeeccCH--HH
Q 011792 287 RSVLYVSFGSFIK-LSGDQILEFWHGIVNSGKGFLWVIRSDLIDGESGVGPVPAE---LDQGTKERGC-IVSWAPQ--EE 359 (477)
Q Consensus 287 ~~~v~vs~Gs~~~-~~~~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~~~~~~~~---~~~~~~~nv~-~~~~~p~--~~ 359 (477)
+..+++..|.... ...+.+-..+..+...+.+++++-.++. ..... +.++.++++. +.++... ..
T Consensus 291 ~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~~~~l~ivG~g~~--------~~~~~l~~~~~~~~~~v~~~~g~~~~~~~~ 362 (485)
T 2qzs_A 291 KVPLFAVVSRLTSQKGLDLVLEALPGLLEQGGQLALLGAGDP--------VLQEGFLAAAAEYPGQVGVQIGYHEAFSHR 362 (485)
T ss_dssp TSCEEEEEEEESGGGCHHHHHHHHHHHHHTTCEEEEEEEECH--------HHHHHHHHHHHHSTTTEEEEESCCHHHHHH
T ss_pred CCeEEEEeccCccccCHHHHHHHHHHHhhCCcEEEEEeCCch--------HHHHHHHHHHHhCCCcEEEeCCCCHHHHHH
Confidence 3456677777653 3333333333334333555555443210 01111 1222346775 6677333 25
Q ss_pred HHhcccccccccc----cCchhHHHHhhcCCceecCCccchhhhhHHHHhhhh---------ceeeeccCCCCHHHHHHH
Q 011792 360 VLAHQAIGGFLTH----SGWNSTLESMVAGVPMICWPQVGDQQVNSRCVSEIW---------KIGFDMKDTCDRSTIEKL 426 (477)
Q Consensus 360 ll~~~~~~~~I~H----GG~gs~~eal~~GvP~l~~P~~~DQ~~na~rv~~~~---------G~G~~l~~~~~~~~l~~~ 426 (477)
++..+++ +|.- |...++.||+++|+|+|+... ......+ +.- +.|... ..-+.++++++
T Consensus 363 ~~~~adv--~v~pS~~E~~g~~~lEAma~G~PvI~s~~----gg~~e~v-~~~~~~~~~~~~~~G~l~-~~~d~~~la~~ 434 (485)
T 2qzs_A 363 IMGGADV--ILVPSRFEPCGLTQLYGLKYGTLPLVRRT----GGLADTV-SDCSLENLADGVASGFVF-EDSNAWSLLRA 434 (485)
T ss_dssp HHHHCSE--EEECCSCCSSCSHHHHHHHHTCEEEEESS----HHHHHHC-CBCCHHHHHTTCCCBEEE-CSSSHHHHHHH
T ss_pred HHHhCCE--EEECCccCCCcHHHHHHHHCCCCEEECCC----CCcccee-ccCccccccccccceEEE-CCCCHHHHHHH
Confidence 7888887 6632 335688999999999999854 2344444 321 367666 34589999999
Q ss_pred HHHHH
Q 011792 427 VRDLM 431 (477)
Q Consensus 427 v~~ll 431 (477)
|.+++
T Consensus 435 i~~ll 439 (485)
T 2qzs_A 435 IRRAF 439 (485)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 99999
No 43
>3oy2_A Glycosyltransferase B736L; rossmann fold, GDP-mannose, sugar, VIRU proteins, viral protein,transferase; 2.31A {Paramecium bursaria chlorella virus NY} PDB: 3oy7_A*
Probab=98.36 E-value=6e-05 Score=73.97 Aligned_cols=80 Identities=11% Similarity=0.029 Sum_probs=53.7
Q ss_pred CceeeccCHHH---HHhccccccccc----ccCchhHHHHhhcCCceecCCccchhhhhHHHHhhhhce-----------
Q 011792 349 GCIVSWAPQEE---VLAHQAIGGFLT----HSGWNSTLESMVAGVPMICWPQVGDQQVNSRCVSEIWKI----------- 410 (477)
Q Consensus 349 v~~~~~~p~~~---ll~~~~~~~~I~----HGG~gs~~eal~~GvP~l~~P~~~DQ~~na~rv~~~~G~----------- 410 (477)
+.+.+|+|+.+ ++..+++ +|. -|...++.||+++|+|+|+.... .....+ + .|.
T Consensus 256 v~~~g~~~~~~~~~~~~~adv--~v~pS~~E~~~~~~lEAma~G~PvI~s~~~----g~~e~v-~-~~~~~~i~~~~~~~ 327 (413)
T 3oy2_A 256 MINRTVLTDERVDMMYNACDV--IVNCSSGEGFGLCSAEGAVLGKPLIISAVG----GADDYF-S-GDCVYKIKPSAWIS 327 (413)
T ss_dssp EEECSCCCHHHHHHHHHHCSE--EEECCSCCSSCHHHHHHHTTTCCEEEECCH----HHHHHS-C-TTTSEEECCCEEEE
T ss_pred eeccCcCCHHHHHHHHHhCCE--EEeCCCcCCCCcHHHHHHHcCCCEEEcCCC----ChHHHH-c-cCcccccccccccc
Confidence 55569999555 6777777 663 23346899999999999996542 333333 2 122
Q ss_pred -----ee--eccCCCCHHHHHHHHHHHHhHhHHHHHH
Q 011792 411 -----GF--DMKDTCDRSTIEKLVRDLMDNKRDKIME 440 (477)
Q Consensus 411 -----G~--~l~~~~~~~~l~~~v~~ll~~~~~~~~~ 440 (477)
|. .+. .-+.++++++| ++++| +..++
T Consensus 328 ~~~~~G~~gl~~-~~d~~~la~~i-~l~~~--~~~~~ 360 (413)
T 3oy2_A 328 VDDRDGIGGIEG-IIDVDDLVEAF-TFFKD--EKNRK 360 (413)
T ss_dssp CTTTCSSCCEEE-ECCHHHHHHHH-HHTTS--HHHHH
T ss_pred cccccCcceeeC-CCCHHHHHHHH-HHhcC--HHHHH
Confidence 44 442 24899999999 99997 55443
No 44
>2hy7_A Glucuronosyltransferase GUMK; glycosyltransferases, xanthan, membrane-associated proteins; 1.90A {Xanthomonas campestris} PDB: 2q6v_A* 3cv3_A* 3cuy_A*
Probab=98.30 E-value=0.00018 Score=70.53 Aligned_cols=75 Identities=8% Similarity=0.032 Sum_probs=56.1
Q ss_pred hcCCCceeeccCHHH---HHhccccccccc---ccC-chhHHHHh-------hcCCceecCCccchhhhhHHHHhhhhce
Q 011792 345 TKERGCIVSWAPQEE---VLAHQAIGGFLT---HSG-WNSTLESM-------VAGVPMICWPQVGDQQVNSRCVSEIWKI 410 (477)
Q Consensus 345 ~~~nv~~~~~~p~~~---ll~~~~~~~~I~---HGG-~gs~~eal-------~~GvP~l~~P~~~DQ~~na~rv~~~~G~ 410 (477)
..+||.+.+++|+.+ ++..+++ +|. +.| ..++.||+ ++|+|+|+... +.+ -..
T Consensus 263 l~~~V~f~G~~~~~~l~~~~~~adv--~v~ps~~E~~~~~~lEAm~Kl~eYla~G~PVIas~~----------v~~-~~~ 329 (406)
T 2hy7_A 263 YGDNVIVYGEMKHAQTIGYIKHARF--GIAPYASEQVPVYLADSSMKLLQYDFFGLPAVCPNA----------VVG-PYK 329 (406)
T ss_dssp CCTTEEEECCCCHHHHHHHHHTCSE--EECCBSCSCCCTTHHHHCHHHHHHHHHTCCEEEEGG----------GTC-SCS
T ss_pred CCCCEEEcCCCCHHHHHHHHHhcCE--EEECCCcccCchHHHHHHHHHHHHhhCCCcEEEehh----------ccc-Ccc
Confidence 347899999999765 6777787 553 334 46789999 99999999855 422 245
Q ss_pred eee-ccCCCCHHHHHHHHHHHHhH
Q 011792 411 GFD-MKDTCDRSTIEKLVRDLMDN 433 (477)
Q Consensus 411 G~~-l~~~~~~~~l~~~v~~ll~~ 433 (477)
|.. + ..-+.++++++|.++++|
T Consensus 330 G~l~v-~~~d~~~la~ai~~ll~~ 352 (406)
T 2hy7_A 330 SRFGY-TPGNADSVIAAITQALEA 352 (406)
T ss_dssp SEEEE-CTTCHHHHHHHHHHHHHC
T ss_pred eEEEe-CCCCHHHHHHHHHHHHhC
Confidence 665 4 345899999999999987
No 45
>2f9f_A First mannosyl transferase (WBAZ-1); alpha-beta protein, structural genomics, PSI, protein struct initiative; 1.80A {Archaeoglobus fulgidus} SCOP: c.87.1.8
Probab=98.25 E-value=2.6e-06 Score=73.33 Aligned_cols=139 Identities=12% Similarity=0.055 Sum_probs=87.2
Q ss_pred EEEEEecCcccCCHHHHHHHHHHHHhC-CCcEEEEEecCCcCCCCCCCCCchhh---HhhhcCCCceeeccCH---HHHH
Q 011792 289 VLYVSFGSFIKLSGDQILEFWHGIVNS-GKGFLWVIRSDLIDGESGVGPVPAEL---DQGTKERGCIVSWAPQ---EEVL 361 (477)
Q Consensus 289 ~v~vs~Gs~~~~~~~~~~~~~~a~~~~-~~~~i~~~~~~~~~~~~~~~~~~~~~---~~~~~~nv~~~~~~p~---~~ll 361 (477)
.+++..|+... ...+..+++++... +.++++.-.+.. ...+.... ....++|+.+.+|+++ ..++
T Consensus 24 ~~i~~~G~~~~--~Kg~~~li~a~~~l~~~~l~i~G~~~~------~~~l~~~~~~~~~~l~~~v~~~g~~~~~e~~~~~ 95 (177)
T 2f9f_A 24 DFWLSVNRIYP--EKRIELQLEVFKKLQDEKLYIVGWFSK------GDHAERYARKIMKIAPDNVKFLGSVSEEELIDLY 95 (177)
T ss_dssp SCEEEECCSSG--GGTHHHHHHHHHHCTTSCEEEEBCCCT------TSTHHHHHHHHHHHSCTTEEEEESCCHHHHHHHH
T ss_pred CEEEEEecccc--ccCHHHHHHHHHhCCCcEEEEEecCcc------HHHHHHHHHhhhcccCCcEEEeCCCCHHHHHHHH
Confidence 35567777753 23345566667665 445554432210 01111111 1224569999999997 4578
Q ss_pred hccccccccc---ccCc-hhHHHHhhcCCceecCCccchhhhhHHHHhhhhceeeeccCCCCHHHHHHHHHHHHhHhHHH
Q 011792 362 AHQAIGGFLT---HSGW-NSTLESMVAGVPMICWPQVGDQQVNSRCVSEIWKIGFDMKDTCDRSTIEKLVRDLMDNKRDK 437 (477)
Q Consensus 362 ~~~~~~~~I~---HGG~-gs~~eal~~GvP~l~~P~~~DQ~~na~rv~~~~G~G~~l~~~~~~~~l~~~v~~ll~~~~~~ 437 (477)
..+++ +|. +.|+ .++.||+++|+|+|+... ..+...+ +.-+.|..+ .-+.+++.++|.++++| +.
T Consensus 96 ~~adi--~v~ps~~e~~~~~~~Eama~G~PvI~~~~----~~~~e~i-~~~~~g~~~--~~d~~~l~~~i~~l~~~--~~ 164 (177)
T 2f9f_A 96 SRCKG--LLCTAKDEDFGLTPIEAMASGKPVIAVNE----GGFKETV-INEKTGYLV--NADVNEIIDAMKKVSKN--PD 164 (177)
T ss_dssp HHCSE--EEECCSSCCSCHHHHHHHHTTCCEEEESS----HHHHHHC-CBTTTEEEE--CSCHHHHHHHHHHHHHC--TT
T ss_pred HhCCE--EEeCCCcCCCChHHHHHHHcCCcEEEeCC----CCHHHHh-cCCCccEEe--CCCHHHHHHHHHHHHhC--HH
Confidence 88887 665 3344 599999999999999754 3444445 333567666 56899999999999987 44
Q ss_pred H-HHHHHHHH
Q 011792 438 I-MESTVQIA 446 (477)
Q Consensus 438 ~-~~~a~~l~ 446 (477)
. ++++++.+
T Consensus 165 ~~~~~~~~~a 174 (177)
T 2f9f_A 165 KFKKDCFRRA 174 (177)
T ss_dssp TTHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 3 55555444
No 46
>2xci_A KDO-transferase, 3-deoxy-D-manno-2-octulosonic acid transferase; KDTA, GSEA, glycosyltransferase superfamily B,; HET: PG4; 2.00A {Aquifex aeolicus} PDB: 2xcu_A*
Probab=98.08 E-value=0.0007 Score=65.51 Aligned_cols=96 Identities=18% Similarity=0.201 Sum_probs=66.3
Q ss_pred CCceeeccC-HHHHHhccccccccc---c--cCchhHHHHhhcCCceecCCccchhhhhHHHHhhhhceeeeccCCCCHH
Q 011792 348 RGCIVSWAP-QEEVLAHQAIGGFLT---H--SGWNSTLESMVAGVPMICWPQVGDQQVNSRCVSEIWKIGFDMKDTCDRS 421 (477)
Q Consensus 348 nv~~~~~~p-~~~ll~~~~~~~~I~---H--GG~gs~~eal~~GvP~l~~P~~~DQ~~na~rv~~~~G~G~~l~~~~~~~ 421 (477)
++.+.++.. -..++..+++ ++. . +|..++.||+++|+|+|+-|...+..+....+.+ .|.++.. -+.+
T Consensus 261 ~v~~~~~~~dl~~~y~~aDv--~vl~ss~~e~gg~~~lEAmA~G~PVI~~~~~~~~~e~~~~~~~-~G~l~~~---~d~~ 334 (374)
T 2xci_A 261 DVILVDRFGILKELYPVGKI--AIVGGTFVNIGGHNLLEPTCWGIPVIYGPYTHKVNDLKEFLEK-EGAGFEV---KNET 334 (374)
T ss_dssp SEEECCSSSCHHHHGGGEEE--EEECSSSSSSCCCCCHHHHTTTCCEEECSCCTTSHHHHHHHHH-TTCEEEC---CSHH
T ss_pred cEEEECCHHHHHHHHHhCCE--EEECCcccCCCCcCHHHHHHhCCCEEECCCccChHHHHHHHHH-CCCEEEe---CCHH
Confidence 344445443 3458888887 553 1 2457899999999999988877777776665533 5887776 3789
Q ss_pred HHHHHHHHHHhH-hHHHHHHHHHHHHHHH
Q 011792 422 TIEKLVRDLMDN-KRDKIMESTVQIAKMA 449 (477)
Q Consensus 422 ~l~~~v~~ll~~-~~~~~~~~a~~l~~~~ 449 (477)
++.+++.++++| ....+.+++++..+.-
T Consensus 335 ~La~ai~~ll~d~~r~~mg~~ar~~~~~~ 363 (374)
T 2xci_A 335 ELVTKLTELLSVKKEIKVEEKSREIKGCY 363 (374)
T ss_dssp HHHHHHHHHHHSCCCCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhHHHHHHHHHHHHHHHHhc
Confidence 999999999975 1134666666655443
No 47
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=97.78 E-value=0.00068 Score=69.48 Aligned_cols=138 Identities=13% Similarity=0.172 Sum_probs=82.1
Q ss_pred cEEEEEecCcc-cCCHHHHHHHHHHHHhCCCcEEEEEecCCcCCCCCCCCCchhhHh-----hhc-CCCceeeccCHHH-
Q 011792 288 SVLYVSFGSFI-KLSGDQILEFWHGIVNSGKGFLWVIRSDLIDGESGVGPVPAELDQ-----GTK-ERGCIVSWAPQEE- 359 (477)
Q Consensus 288 ~~v~vs~Gs~~-~~~~~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~-----~~~-~nv~~~~~~p~~~- 359 (477)
.+|+ ..|... +....+++++....+..+.-.++.++.+ | .....+.+ ... ++|.+.+++|+.+
T Consensus 377 ~~v~-~~g~~~~K~~~~li~a~~~l~~~~~~~~l~i~G~~-----g---~~~~~l~~~~~~~~l~~~~v~~~g~~~~~~~ 447 (568)
T 2vsy_A 377 GVVL-CCFNNSYKLNPQSMARMLAVLREVPDSVLWLLSGP-----G---EADARLRAFAHAQGVDAQRLVFMPKLPHPQY 447 (568)
T ss_dssp SCEE-EECCCGGGCCHHHHHHHHHHHHHCTTCEEEEECCS-----T---THHHHHHHHHHHTTCCGGGEEEECCCCHHHH
T ss_pred CEEE-EeCCccccCCHHHHHHHHHHHHhCCCcEEEEecCC-----H---HHHHHHHHHHHHcCCChhHEEeeCCCCHHHH
Confidence 3444 345443 4455666666555555444345555311 1 11122221 122 6789999998654
Q ss_pred --HHhcccccccc---cccCchhHHHHhhcCCceecCCccchhhhhH-HHHhhhhceeeeccCCCCHHHHHHHHHHHHhH
Q 011792 360 --VLAHQAIGGFL---THSGWNSTLESMVAGVPMICWPQVGDQQVNS-RCVSEIWKIGFDMKDTCDRSTIEKLVRDLMDN 433 (477)
Q Consensus 360 --ll~~~~~~~~I---~HGG~gs~~eal~~GvP~l~~P~~~DQ~~na-~rv~~~~G~G~~l~~~~~~~~l~~~v~~ll~~ 433 (477)
++..+++ +| ..|+..++.||+++|+|+|++|-..=....+ ..+ ...|+...+.. +.+++.+++.++++|
T Consensus 448 ~~~~~~adv--~v~ps~~~~g~~~lEAma~G~Pvv~~~g~~~~s~~~~~~l-~~~g~~e~v~~--~~~~la~~i~~l~~~ 522 (568)
T 2vsy_A 448 LARYRHADL--FLDTHPYNAHTTASDALWTGCPVLTTPGETFAARVAGSLN-HHLGLDEMNVA--DDAAFVAKAVALASD 522 (568)
T ss_dssp HHHGGGCSE--EECCSSSCCSHHHHHHHHTTCCEEBCCCSSGGGSHHHHHH-HHHTCGGGBCS--SHHHHHHHHHHHHHC
T ss_pred HHHHhcCCE--EeeCCCCCCcHHHHHHHhCCCCEEeccCCCchHHHHHHHH-HHCCChhhhcC--CHHHHHHHHHHHhcC
Confidence 5777777 65 2366789999999999999977432112222 233 33566655533 899999999999997
Q ss_pred hHHHHHHH
Q 011792 434 KRDKIMES 441 (477)
Q Consensus 434 ~~~~~~~~ 441 (477)
+..+++
T Consensus 523 --~~~~~~ 528 (568)
T 2vsy_A 523 --PAALTA 528 (568)
T ss_dssp --HHHHHH
T ss_pred --HHHHHH
Confidence 554443
No 48
>3rhz_A GTF3, nucleotide sugar synthetase-like protein; glycosyltransferase, transferase; HET: UDP; 1.90A {Streptococcus parasanguinis} PDB: 3qkw_A*
Probab=97.53 E-value=0.00019 Score=68.28 Aligned_cols=111 Identities=15% Similarity=0.199 Sum_probs=81.1
Q ss_pred CCceeeccCHHHH---HhcccccccccccCc---------hhHHHHhhcCCceecCCccchhhhhHHHHhhhhceeeecc
Q 011792 348 RGCIVSWAPQEEV---LAHQAIGGFLTHSGW---------NSTLESMVAGVPMICWPQVGDQQVNSRCVSEIWKIGFDMK 415 (477)
Q Consensus 348 nv~~~~~~p~~~l---l~~~~~~~~I~HGG~---------gs~~eal~~GvP~l~~P~~~DQ~~na~rv~~~~G~G~~l~ 415 (477)
||.+.+|+|+.++ |..++..++.+-+.. +-+.|++++|+|+|+.+ ...++..+ ++.|+|...+
T Consensus 215 nV~f~G~~~~~el~~~l~~~~~~lv~~~~~~~~y~~~~~P~Kl~eymA~G~PVI~~~----~~~~~~~v-~~~~~G~~~~ 289 (339)
T 3rhz_A 215 NVHKINYRPDEQLLMEMSQGGFGLVWMDDKDKEYQSLYCSYKLGSFLAAGIPVIVQE----GIANQELI-ENNGLGWIVK 289 (339)
T ss_dssp TEEEEECCCHHHHHHHHHTEEEEECCCCGGGHHHHTTCCCHHHHHHHHHTCCEEEET----TCTTTHHH-HHHTCEEEES
T ss_pred CEEEeCCCCHHHHHHHHHhCCEEEEECCCchhHHHHhcChHHHHHHHHcCCCEEEcc----ChhHHHHH-HhCCeEEEeC
Confidence 9999999998885 444555444433322 34789999999999754 45566667 4479999985
Q ss_pred CCCCHHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHH
Q 011792 416 DTCDRSTIEKLVRDLMDNKRDKIMESTVQIAKMARDAVKEGGSSYRNLEKLIEDI 470 (477)
Q Consensus 416 ~~~~~~~l~~~v~~ll~~~~~~~~~~a~~l~~~~~~~~~~gg~~~~~~~~~i~~~ 470 (477)
+.+++.+++..+..++...+++|+++.++.++. |-....++.+.+.++
T Consensus 290 ---~~~e~~~~i~~l~~~~~~~m~~na~~~a~~~~~----~~f~k~~l~~~~~~~ 337 (339)
T 3rhz_A 290 ---DVEEAIMKVKNVNEDEYIELVKNVRSFNPILRK----GFFTRRLLTESVFQA 337 (339)
T ss_dssp ---SHHHHHHHHHHCCHHHHHHHHHHHHHHTHHHHT----THHHHHHHHHHHHHH
T ss_pred ---CHHHHHHHHHHhCHHHHHHHHHHHHHHHHHhhc----cHHHHHHHHHHHHHh
Confidence 578899999988776667889999999998876 555555566665554
No 49
>3q3e_A HMW1C-like glycosyltransferase; N-glycosylation; 2.10A {Actinobacillus pleuropneumoniae serovaorganism_taxid} PDB: 3q3h_A* 3q3i_A
Probab=97.50 E-value=0.0015 Score=66.22 Aligned_cols=147 Identities=7% Similarity=0.006 Sum_probs=92.1
Q ss_pred CcEEEEEecCcccCCHHHHHHHHHHHHhCCCcEEEEE-ecCCcCCCCCCCCCchh-hHhhhcCCCceeeccCHHHHH---
Q 011792 287 RSVLYVSFGSFIKLSGDQILEFWHGIVNSGKGFLWVI-RSDLIDGESGVGPVPAE-LDQGTKERGCIVSWAPQEEVL--- 361 (477)
Q Consensus 287 ~~~v~vs~Gs~~~~~~~~~~~~~~a~~~~~~~~i~~~-~~~~~~~~~~~~~~~~~-~~~~~~~nv~~~~~~p~~~ll--- 361 (477)
..++|.+|+...+..++.++...+.+++.+..++|.. .+. .. |....+-.. ...+..+.+.+.+.+|+.+.+
T Consensus 440 G~v~Fg~fn~~~Ki~p~~l~~WarIL~~vP~s~L~l~~~g~-~~--g~~~~~~~~~~~~GI~~Rv~F~g~~p~~e~la~y 516 (631)
T 3q3e_A 440 EVVNIGIASTTMKLNPYFLEALKAIRDRAKVKVHFHFALGQ-SN--GITHPYVERFIKSYLGDSATAHPHSPYHQYLRIL 516 (631)
T ss_dssp SEEEEEEEECSTTCCHHHHHHHHHHHHHCSSEEEEEEEESS-CC--GGGHHHHHHHHHHHHGGGEEEECCCCHHHHHHHH
T ss_pred CeEEEEECCccccCCHHHHHHHHHHHHhCCCcEEEEEecCC-Cc--hhhHHHHHHHHHcCCCccEEEcCCCCHHHHHHHH
Confidence 3689999999999999999999999988887777643 211 00 100001001 111234677888999876644
Q ss_pred hcccccccc---cccCchhHHHHhhcCCceecCCccc-hhhhhHHHHhhhhceeeeccCCCCHHHHHHHHHHHHhHhHHH
Q 011792 362 AHQAIGGFL---THSGWNSTLESMVAGVPMICWPQVG-DQQVNSRCVSEIWKIGFDMKDTCDRSTIEKLVRDLMDNKRDK 437 (477)
Q Consensus 362 ~~~~~~~~I---~HGG~gs~~eal~~GvP~l~~P~~~-DQ~~na~rv~~~~G~G~~l~~~~~~~~l~~~v~~ll~~~~~~ 437 (477)
..+|+ ++ ..+|..|+.|||++|||+|+++-.. -...-+..+ ...|+.-.+- .-+.++..+...++.+| +.
T Consensus 517 ~~aDI--fLDpfpy~GgtTtlEALwmGVPVVTl~G~~~asRvgaSlL-~~~GLpE~LI-A~d~eeYv~~Av~La~D--~~ 590 (631)
T 3q3e_A 517 HNCDM--MVNPFPFGNTNGIIDMVTLGLVGVCKTGAEVHEHIDEGLF-KRLGLPEWLI-ANTVDEYVERAVRLAEN--HQ 590 (631)
T ss_dssp HTCSE--EECCSSSCCSHHHHHHHHTTCCEEEECCSSHHHHHHHHHH-HHTTCCGGGE-ESSHHHHHHHHHHHHHC--HH
T ss_pred hcCcE--EEeCCcccCChHHHHHHHcCCCEEeccCCcHHHHhHHHHH-HhcCCCccee-cCCHHHHHHHHHHHhCC--HH
Confidence 56665 43 3488899999999999999987421 111111222 2246553211 13678888888888887 55
Q ss_pred HHHHH
Q 011792 438 IMEST 442 (477)
Q Consensus 438 ~~~~a 442 (477)
.+++.
T Consensus 591 ~l~~L 595 (631)
T 3q3e_A 591 ERLEL 595 (631)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 44443
No 50
>3qhp_A Type 1 capsular polysaccharide biosynthesis prote (CAPJ); rossmann fold, glycosyltransferase, transferase; 1.50A {Helicobacter pylori}
Probab=97.47 E-value=0.00074 Score=56.75 Aligned_cols=126 Identities=10% Similarity=0.191 Sum_probs=73.3
Q ss_pred cEEEEEecCcccCCHHHHHHHHHHHHhCC--CcEEEEEecCCcCCCCCCCCCchhhH---hhhcCCCceeeccCHHH---
Q 011792 288 SVLYVSFGSFIKLSGDQILEFWHGIVNSG--KGFLWVIRSDLIDGESGVGPVPAELD---QGTKERGCIVSWAPQEE--- 359 (477)
Q Consensus 288 ~~v~vs~Gs~~~~~~~~~~~~~~a~~~~~--~~~i~~~~~~~~~~~~~~~~~~~~~~---~~~~~nv~~~~~~p~~~--- 359 (477)
+++++..|.... ...+..+++++.... .++-+.+-+. | .....+. ++...++.+ +|+|+.+
T Consensus 2 ~~~i~~~G~~~~--~Kg~~~li~a~~~l~~~~~~~l~i~G~-----g---~~~~~~~~~~~~~~~~v~~-g~~~~~~~~~ 70 (166)
T 3qhp_A 2 PFKIAMVGRYSN--EKNQSVLIKAVALSKYKQDIVLLLKGK-----G---PDEKKIKLLAQKLGVKAEF-GFVNSNELLE 70 (166)
T ss_dssp CEEEEEESCCST--TTTHHHHHHHHHTCTTGGGEEEEEECC-----S---TTHHHHHHHHHHHTCEEEC-CCCCHHHHHH
T ss_pred ceEEEEEeccch--hcCHHHHHHHHHHhccCCCeEEEEEeC-----C---ccHHHHHHHHHHcCCeEEE-eecCHHHHHH
Confidence 467788888753 233455566665543 2343333222 1 1112222 223347777 9999655
Q ss_pred HHhccccccccc----ccCchhHHHHhhcCC-ceecCCccchhhhhHHHHhhhhceeeeccCCCCHHHHHHHHHHHHhH
Q 011792 360 VLAHQAIGGFLT----HSGWNSTLESMVAGV-PMICWPQVGDQQVNSRCVSEIWKIGFDMKDTCDRSTIEKLVRDLMDN 433 (477)
Q Consensus 360 ll~~~~~~~~I~----HGG~gs~~eal~~Gv-P~l~~P~~~DQ~~na~rv~~~~G~G~~l~~~~~~~~l~~~v~~ll~~ 433 (477)
++..+++ +|. -|...++.||+++|+ |+|+...... ....+ +.-+. .+ ..-+.+++.+++.++++|
T Consensus 71 ~~~~adv--~v~ps~~e~~~~~~~Eama~G~vPvi~~~~~~~---~~~~~-~~~~~--~~-~~~~~~~l~~~i~~l~~~ 140 (166)
T 3qhp_A 71 ILKTCTL--YVHAANVESEAIACLEAISVGIVPVIANSPLSA---TRQFA-LDERS--LF-EPNNAKDLSAKIDWWLEN 140 (166)
T ss_dssp HHTTCSE--EEECCCSCCCCHHHHHHHHTTCCEEEECCTTCG---GGGGC-SSGGG--EE-CTTCHHHHHHHHHHHHHC
T ss_pred HHHhCCE--EEECCcccCccHHHHHHHhcCCCcEEeeCCCCc---hhhhc-cCCce--EE-cCCCHHHHHHHHHHHHhC
Confidence 6777777 664 244569999999996 9999432221 11122 21122 22 345899999999999996
No 51
>2bfw_A GLGA glycogen synthase; glycosyltransferase family 5 UDP/ADP-glucose-glycogen syntha rossman folds, transferase; 1.8A {Pyrococcus abyssi} SCOP: c.87.1.8
Probab=97.34 E-value=0.0019 Score=56.01 Aligned_cols=81 Identities=12% Similarity=0.068 Sum_probs=58.0
Q ss_pred CCce-eeccCHH---HHHhcccccccccc----cCchhHHHHhhcCCceecCCccchhhhhHHHHhhhhceeeeccCCCC
Q 011792 348 RGCI-VSWAPQE---EVLAHQAIGGFLTH----SGWNSTLESMVAGVPMICWPQVGDQQVNSRCVSEIWKIGFDMKDTCD 419 (477)
Q Consensus 348 nv~~-~~~~p~~---~ll~~~~~~~~I~H----GG~gs~~eal~~GvP~l~~P~~~DQ~~na~rv~~~~G~G~~l~~~~~ 419 (477)
++.+ .+++++. .++..+++ +|.- |...++.||+++|+|+|+.... .....+ . -+.|...+ .-+
T Consensus 96 ~v~~~~g~~~~~~~~~~~~~ad~--~l~ps~~e~~~~~~~Ea~a~G~PvI~~~~~----~~~e~~-~-~~~g~~~~-~~~ 166 (200)
T 2bfw_A 96 NVKVITEMLSREFVRELYGSVDF--VIIPSYFEPFGLVALEAMCLGAIPIASAVG----GLRDII-T-NETGILVK-AGD 166 (200)
T ss_dssp TEEEECSCCCHHHHHHHHTTCSE--EEECCSCCSSCHHHHHHHHTTCEEEEESCH----HHHHHC-C-TTTCEEEC-TTC
T ss_pred CEEEEeccCCHHHHHHHHHHCCE--EEECCCCCCccHHHHHHHHCCCCEEEeCCC----ChHHHc-C-CCceEEec-CCC
Confidence 8999 9999955 37777777 6642 2346899999999999987543 333333 3 35666663 358
Q ss_pred HHHHHHHHHHHHh-HhHHHHH
Q 011792 420 RSTIEKLVRDLMD-NKRDKIM 439 (477)
Q Consensus 420 ~~~l~~~v~~ll~-~~~~~~~ 439 (477)
.+++.++|.++++ | +..+
T Consensus 167 ~~~l~~~i~~l~~~~--~~~~ 185 (200)
T 2bfw_A 167 PGELANAILKALELS--RSDL 185 (200)
T ss_dssp HHHHHHHHHHHHHCC--HHHH
T ss_pred HHHHHHHHHHHHhcC--HHHH
Confidence 9999999999998 7 5443
No 52
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=97.29 E-value=0.0035 Score=66.01 Aligned_cols=142 Identities=17% Similarity=0.250 Sum_probs=89.8
Q ss_pred CCCcEEEEEecCcccCCHHHHHHHHHHHHhCCCcEEEEEecCCcCCCCCCCCCchhhHh--hhcCCCceeeccCHHHHHh
Q 011792 285 PSRSVLYVSFGSFIKLSGDQILEFWHGIVNSGKGFLWVIRSDLIDGESGVGPVPAELDQ--GTKERGCIVSWAPQEEVLA 362 (477)
Q Consensus 285 ~~~~~v~vs~Gs~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~--~~~~nv~~~~~~p~~~ll~ 362 (477)
+++.+||.+|....+..++.+..-.+.+++.+.-.+|........ ...+...+.+ -.++++.+.+..|..+-|.
T Consensus 520 p~~~v~f~~fN~~~Ki~p~~~~~W~~IL~~vP~S~L~Ll~~~~~~----~~~l~~~~~~~gi~~~r~~f~~~~~~~~~l~ 595 (723)
T 4gyw_A 520 PEDAIVYCNFNQLYKIDPSTLQMWANILKRVPNSVLWLLRFPAVG----EPNIQQYAQNMGLPQNRIIFSPVAPKEEHVR 595 (723)
T ss_dssp CTTSEEEECCSCGGGCCHHHHHHHHHHHHHCSSEEEEEEETTGGG----HHHHHHHHHHTTCCGGGEEEEECCCHHHHHH
T ss_pred CCCCEEEEeCCccccCCHHHHHHHHHHHHhCCCCeEEEEeCcHHH----HHHHHHHHHhcCCCcCeEEECCCCCHHHHHH
Confidence 466799999999999999999999999999998888888543111 0001111110 0135678888888666443
Q ss_pred c-cccccccc---ccCchhHHHHhhcCCceecCCcc-chhhhhHHHHhhhhceeeeccCCCCHHHHHHHHHHHHhH
Q 011792 363 H-QAIGGFLT---HSGWNSTLESMVAGVPMICWPQV-GDQQVNSRCVSEIWKIGFDMKDTCDRSTIEKLVRDLMDN 433 (477)
Q Consensus 363 ~-~~~~~~I~---HGG~gs~~eal~~GvP~l~~P~~-~DQ~~na~rv~~~~G~G~~l~~~~~~~~l~~~v~~ll~~ 433 (477)
+ ..+++++- .+|..|+.|||..|||+|.++-. +=...-+..+ ..+|+.-.+ .-|.++-.+...++-+|
T Consensus 596 ~~~~~Di~LDt~p~~g~tT~~eal~~GvPvvt~~g~~~~sR~~~s~l-~~~gl~e~i--a~~~~~Y~~~a~~la~d 668 (723)
T 4gyw_A 596 RGQLADVCLDTPLCNGHTTGMDVLWAGTPMVTMPGETLASRVAASQL-TCLGCLELI--AKNRQEYEDIAVKLGTD 668 (723)
T ss_dssp HGGGCSEEECCSSSCCSHHHHHHHHTTCCEEBCCCSSGGGTHHHHHH-HHHTCGGGB--CSSHHHHHHHHHHHHHC
T ss_pred HhCCCeEEeCCCCcCCHHHHHHHHHcCCCEEEccCCCccHhHHHHHH-HHcCCcccc--cCCHHHHHHHHHHHhcC
Confidence 2 22333654 78999999999999999999831 1112222333 335655433 23555555555555555
No 53
>3tov_A Glycosyl transferase family 9; structural genomics, PSI-BIOL protein structure initiative, midwest center for structural genomics, MCSG; 2.98A {Veillonella parvula}
Probab=97.20 E-value=0.0097 Score=56.78 Aligned_cols=104 Identities=13% Similarity=0.097 Sum_probs=70.2
Q ss_pred CCEEEEEcCCCCCCHHHHHHHHHHHHhC--CCeEEEEeCCccchhccCCCcccccccCCCCeE-EEeCCCCCCCCCCCCC
Q 011792 6 VPHVVLLPFPAYGHIKPMLSLAKLFSHA--GFRITFVNTDQYHDRLFGNTDVTAFYKHFPNFL-CTSIPDGLPPDNPRFG 82 (477)
Q Consensus 6 ~~~il~~~~~~~GHv~p~l~La~~L~~r--GH~Vt~~~~~~~~~~l~~~~~~~~~~~~~~~~~-~~~l~~~~~~~~~~~~ 82 (477)
.+||+++-..+.|++.-+.++.+.|+++ +.+|++++.+.+.+-+... +.++ ++.++..
T Consensus 8 ~~~iLvi~~~~lGD~i~~~P~l~~L~~~~P~a~I~~l~~~~~~~l~~~~----------p~vd~vi~~~~~--------- 68 (349)
T 3tov_A 8 YKRIVVTFLMHLGDVILTTPFLEVLRKAAPHSHITYVIDEKLQQVMEYN----------PNIDELIVVDKK--------- 68 (349)
T ss_dssp TCEEEEECCCCHHHHHTTHHHHHHHHHHCTTSEEEEEEEGGGGGGTSSC----------TTCSEEEEECCS---------
T ss_pred CCEEEEEecCcccHHHHHHHHHHHHHHHCCCCEEEEEECcchhHHHhcC----------CCccEEEEeCcc---------
Confidence 5899999999999999999999999987 9999999997765554432 2343 4544410
Q ss_pred CChHHHHHhhchhcHHHHHHHHhcCCCCC-eEEEECCCcchHHHHHHHcCCCeEE
Q 011792 83 IYTKDWFCSNKPVSKLAFRQLLMTPGRLP-TCIISDSIMSFAIDVAEELNIPIIT 136 (477)
Q Consensus 83 ~~~~~~~~~~~~~~~~~l~~~l~~~~~~~-D~vI~D~~~~~~~~~A~~lgiP~v~ 136 (477)
.....+..++ .+...++.. ++ |++|.=....-...++...|+|...
T Consensus 69 -~~~~~~~~~~-----~l~~~Lr~~--~y~D~vidl~~~~rs~~l~~~~~a~~ri 115 (349)
T 3tov_A 69 -GRHNSISGLN-----EVAREINAK--GKTDIVINLHPNERTSYLAWKIHAPITT 115 (349)
T ss_dssp -SHHHHHHHHH-----HHHHHHHHH--CCCCEEEECCCSHHHHHHHHHHCCSEEE
T ss_pred -cccccHHHHH-----HHHHHHhhC--CCCeEEEECCCChHHHHHHHHhCCCeEE
Confidence 1111111111 122233333 89 9999876666666788888999754
No 54
>1psw_A ADP-heptose LPS heptosyltransferase II; structural genomics, NYSGXRC, LPS biosynthetic pathway, PSI, protein structure initiative; 2.00A {Escherichia coli} SCOP: c.87.1.7
Probab=97.16 E-value=0.029 Score=53.25 Aligned_cols=103 Identities=13% Similarity=-0.019 Sum_probs=64.8
Q ss_pred CEEEEEcCCCCCCHHHHHHHHHHHHhC--CCeEEEEeCCccchhccCCCcccccccCCCCe-EEEeCCCCCCCCCCCCCC
Q 011792 7 PHVVLLPFPAYGHIKPMLSLAKLFSHA--GFRITFVNTDQYHDRLFGNTDVTAFYKHFPNF-LCTSIPDGLPPDNPRFGI 83 (477)
Q Consensus 7 ~~il~~~~~~~GHv~p~l~La~~L~~r--GH~Vt~~~~~~~~~~l~~~~~~~~~~~~~~~~-~~~~l~~~~~~~~~~~~~ 83 (477)
|||+++.....|++.-..++.++|+++ |.++++++.+.+.+.+... +.+ +++.++.. . ...
T Consensus 1 mkILii~~~~~GD~i~~~p~l~~Lk~~~P~~~i~~l~~~~~~~l~~~~----------p~i~~v~~~~~~----~--~~~ 64 (348)
T 1psw_A 1 MKILVIGPSWVGDMMMSQSLYRTLQARYPQAIIDVMAPAWCRPLLSRM----------PEVNEAIPMPLG----H--GAL 64 (348)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHHHSTTCEEEEEECGGGHHHHTTC----------TTEEEEEEC-------------
T ss_pred CeEEEEeccccCHHHHHHHHHHHHHHHCCCCEEEEEECcchhHHHhcC----------CccCEEEEecCC----c--ccc
Confidence 689999988889999999999999987 9999999997665544332 224 44544310 0 000
Q ss_pred ChHHHHHhhchhcHHHHHHHHhcCCCCCeEEEECCCcchHHHHHHHcCCCeEE
Q 011792 84 YTKDWFCSNKPVSKLAFRQLLMTPGRLPTCIISDSIMSFAIDVAEELNIPIIT 136 (477)
Q Consensus 84 ~~~~~~~~~~~~~~~~l~~~l~~~~~~~D~vI~D~~~~~~~~~A~~lgiP~v~ 136 (477)
. +. ....+...+++. +||++|.-....-...++...|+|...
T Consensus 65 ~----~~-----~~~~l~~~l~~~--~~D~vid~~~~~~sa~~~~~~~~~~~i 106 (348)
T 1psw_A 65 E----IG-----ERRKLGHSLREK--RYDRAYVLPNSFKSALVPLFAGIPHRT 106 (348)
T ss_dssp C----HH-----HHHHHHHHTTTT--TCSEEEECSCCSGGGHHHHHTTCSEEE
T ss_pred c----hH-----HHHHHHHHHHhc--CCCEEEECCCChHHHHHHHHhCCCEEe
Confidence 0 01 111233334433 899999433334556788888999743
No 55
>2x0d_A WSAF; GT4 family, transferase; HET: MSE; 2.28A {Geobacillus stearothermophilus} PDB: 2x0f_A* 2x0e_A*
Probab=94.26 E-value=0.15 Score=49.77 Aligned_cols=84 Identities=12% Similarity=0.019 Sum_probs=56.3
Q ss_pred CCCceeeccCHHH---HHhccccccccccc---Cc-hhHHHHhhcCCceecCCccchhhhhHHHHhhhhceeeeccCCCC
Q 011792 347 ERGCIVSWAPQEE---VLAHQAIGGFLTHS---GW-NSTLESMVAGVPMICWPQVGDQQVNSRCVSEIWKIGFDMKDTCD 419 (477)
Q Consensus 347 ~nv~~~~~~p~~~---ll~~~~~~~~I~HG---G~-gs~~eal~~GvP~l~~P~~~DQ~~na~rv~~~~G~G~~l~~~~~ 419 (477)
.++.+.+++|+.+ ++..+++ ||.-+ |. .++.||+++|+|+|+ -..+ ....+ +.-..|+.+ ..-+
T Consensus 295 ~~v~f~G~~~~~~l~~~~~~adv--~v~pS~~E~~g~~~lEAmA~G~PVV~-~~~g----~~e~v-~~~~~G~lv-~~~d 365 (413)
T 2x0d_A 295 IHLNSLGKLTLEDYADLLKRSSI--GISLMISPHPSYPPLEMAHFGLRVIT-NKYE----NKDLS-NWHSNIVSL-EQLN 365 (413)
T ss_dssp EEEEEEESCCHHHHHHHHHHCCE--EECCCSSSSCCSHHHHHHHTTCEEEE-ECBT----TBCGG-GTBTTEEEE-SSCS
T ss_pred CcEEEcCCCCHHHHHHHHHhCCE--EEEecCCCCCCcHHHHHHhCCCcEEE-eCCC----cchhh-hcCCCEEEe-CCCC
Confidence 5788999998765 6777777 66422 33 568999999999997 2221 12233 422356656 4468
Q ss_pred HHHHHHHHHHHHhHhHHHHHHH
Q 011792 420 RSTIEKLVRDLMDNKRDKIMES 441 (477)
Q Consensus 420 ~~~l~~~v~~ll~~~~~~~~~~ 441 (477)
+++++++|.++++| +..+++
T Consensus 366 ~~~la~ai~~ll~~--~~~~~~ 385 (413)
T 2x0d_A 366 PENIAETLVELCMS--FNNRDV 385 (413)
T ss_dssp HHHHHHHHHHHHHH--TC----
T ss_pred HHHHHHHHHHHHcC--HHHHHH
Confidence 99999999999998 655554
No 56
>3vue_A GBSS-I, granule-bound starch synthase 1, chloroplastic/amyloplastic; rossmann fold, glycosyltransferase, transferase; 2.70A {Oryza sativa japonica group} PDB: 3vuf_A*
Probab=93.29 E-value=0.12 Score=52.21 Aligned_cols=133 Identities=12% Similarity=0.073 Sum_probs=74.2
Q ss_pred cEEEEEecCccc-CCHHHHHHHHHHHHhCCCcEEEEEecCCcCCCCCCCCCchhhHhhhcCCCceeeccCHHH---HHhc
Q 011792 288 SVLYVSFGSFIK-LSGDQILEFWHGIVNSGKGFLWVIRSDLIDGESGVGPVPAELDQGTKERGCIVSWAPQEE---VLAH 363 (477)
Q Consensus 288 ~~v~vs~Gs~~~-~~~~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~~p~~~---ll~~ 363 (477)
.++++..|.... ...+.+...+..+.+.+.++++...++... ...-.....+.+.++.+....+... ++..
T Consensus 327 ~p~i~~vgRl~~~Kg~~~li~a~~~l~~~~~~l~l~G~G~~~~-----~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~ 401 (536)
T 3vue_A 327 IPLIAFIGRLEEQKGPDVMAAAIPELMQEDVQIVLLGTGKKKF-----EKLLKSMEEKYPGKVRAVVKFNAPLAHLIMAG 401 (536)
T ss_dssp SCEEEEECCBSGGGCHHHHHHHHHHHTTSSCEEEEECCBCHHH-----HHHHHHHHHHSTTTEEEECSCCHHHHHHHHHH
T ss_pred CcEEEEEeeccccCChHHHHHHHHHhHhhCCeEEEEeccCchH-----HHHHHHHHhhcCCceEEEEeccHHHHHHHHHh
Confidence 345677787763 334444444444444466666554322000 0011112234467888887777543 6777
Q ss_pred ccccccccc---cCc-hhHHHHhhcCCceecCCccchhhhhHHHHhhhhceeeecc---------CCCCHHHHHHHHHHH
Q 011792 364 QAIGGFLTH---SGW-NSTLESMVAGVPMICWPQVGDQQVNSRCVSEIWKIGFDMK---------DTCDRSTIEKLVRDL 430 (477)
Q Consensus 364 ~~~~~~I~H---GG~-gs~~eal~~GvP~l~~P~~~DQ~~na~rv~~~~G~G~~l~---------~~~~~~~l~~~v~~l 430 (477)
+++ ||.= =|+ .+++||+++|+|+|+.... .....| ..-.-|.... ...+.+.|.++|+++
T Consensus 402 aD~--~v~PS~~E~fgl~~lEAma~G~PvI~s~~g----G~~e~V-~dg~~G~~~~~~~~~g~l~~~~d~~~la~ai~ra 474 (536)
T 3vue_A 402 ADV--LAVPSRFEPCGLIQLQGMRYGTPCACASTG----GLVDTV-IEGKTGFHMGRLSVDCKVVEPSDVKKVAATLKRA 474 (536)
T ss_dssp CSE--EEECCSCCSSCSHHHHHHHTTCCEEECSCT----HHHHHC-CBTTTEEECCCCCSCTTCCCHHHHHHHHHHHHHH
T ss_pred hhe--eecccccCCCCHHHHHHHHcCCCEEEcCCC----Cchhee-eCCCCccccccCCCceeEECCCCHHHHHHHHHHH
Confidence 777 6642 244 4889999999999987542 233333 2112333221 234578899999988
Q ss_pred Hh
Q 011792 431 MD 432 (477)
Q Consensus 431 l~ 432 (477)
+.
T Consensus 475 l~ 476 (536)
T 3vue_A 475 IK 476 (536)
T ss_dssp HH
T ss_pred HH
Confidence 86
No 57
>2phj_A 5'-nucleotidase SURE; SURE protein, putative acid phosphatase, structural genomics, 3-D structure, mixed alpha/beta protein, NPPSFA; 1.50A {Aquifex aeolicus VF5} PDB: 2wqk_A
Probab=92.15 E-value=0.87 Score=40.45 Aligned_cols=113 Identities=19% Similarity=0.187 Sum_probs=63.5
Q ss_pred CEEEEEcCCCCCCHHHHHHHHHHHHhCCCeEEEEeCCccchhccCCCcccccccCCCCeEEEeCCCCCCCCCCCCCCChH
Q 011792 7 PHVVLLPFPAYGHIKPMLSLAKLFSHAGFRITFVNTDQYHDRLFGNTDVTAFYKHFPNFLCTSIPDGLPPDNPRFGIYTK 86 (477)
Q Consensus 7 ~~il~~~~~~~GHv~p~l~La~~L~~rGH~Vt~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 86 (477)
||||+..--|. +---+.+|+++|.+.| +|+++.+.....-..... .....+.+..+..... . ...-..
T Consensus 2 M~ILlTNDDGi-~apGi~aL~~~l~~~g-~V~VVAP~~~~Sg~g~si------t~~~pl~~~~~~~~~~--~--~v~GTP 69 (251)
T 2phj_A 2 PTFLLVNDDGY-FSPGINALREALKSLG-RVVVVAPDRNLSGVGHSL------TFTEPLKMRKIDTDFY--T--VIDGTP 69 (251)
T ss_dssp CEEEEECSSCT-TCHHHHHHHHHHTTTS-EEEEEEESSCCTTSCCSC------CCSSCEEEEEEETTEE--E--ETTCCH
T ss_pred CEEEEECCCCC-CCHHHHHHHHHHHhcC-CEEEEecCCCccCCccce------ecCCCeEEEEecCCCe--E--EECCCH
Confidence 78888877665 4556899999999998 999999966543322211 1111244443321100 0 000000
Q ss_pred HHHHhhchhcHHHHHHHHhcCCCCCeEEEECC----------Ccc---hHHHHHHHcCCCeEEEcc
Q 011792 87 DWFCSNKPVSKLAFRQLLMTPGRLPTCIISDS----------IMS---FAIDVAEELNIPIITFRP 139 (477)
Q Consensus 87 ~~~~~~~~~~~~~l~~~l~~~~~~~D~vI~D~----------~~~---~~~~~A~~lgiP~v~~~~ 139 (477)
.-|- .-.+..++.. .+||+||+.. ++. +|++-|..+|||.|.++.
T Consensus 70 aDCV------~lal~~l~~~--~~PDLVvSGIN~G~Nlg~dv~ySGTVgAA~Ea~~~GiPaIA~S~ 127 (251)
T 2phj_A 70 ADCV------HLGYRVILEE--KKPDLVLSGINEGPNLGEDITYSGTVSGAMEGRILGIPSIAFSA 127 (251)
T ss_dssp HHHH------HHHHHTTTTT--CCCSEEEEEEESSCCCGGGGGGCHHHHHHHHHHHTTCCEEEEEE
T ss_pred HHHH------HHHHHHhcCC--CCCCEEEECCcCCCcCCCCCccchHHHHHHHHHHcCCCeEEEEc
Confidence 0110 1123333331 2899999853 222 566778889999999865
No 58
>2wqk_A 5'-nucleotidase SURE; SURE protein, putative acid phosphatase, structural genomics, 3-D structure, mixed alpha/beta protein, NPPSFA; 1.50A {Aquifex aeolicus}
Probab=89.37 E-value=1.9 Score=38.50 Aligned_cols=112 Identities=17% Similarity=0.155 Sum_probs=60.4
Q ss_pred EEEEEcCCCCCCHHHHHHHHHHHHhCCCeEEEEeCCccchhccCCCcccccccCCCCeEEEeCCCCCCCCCCCCCCChHH
Q 011792 8 HVVLLPFPAYGHIKPMLSLAKLFSHAGFRITFVNTDQYHDRLFGNTDVTAFYKHFPNFLCTSIPDGLPPDNPRFGIYTKD 87 (477)
Q Consensus 8 ~il~~~~~~~GHv~p~l~La~~L~~rGH~Vt~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 87 (477)
|||+.---|. +---+.+|+++|.+.| +|+++.|.....-.... ......+.+......... .. ... ..
T Consensus 3 ~ILlTNDDGi-~apGi~~L~~~l~~~g-~V~VvAP~~~~Sg~g~s------iT~~~pl~~~~~~~~~~~-~v--~GT-Pa 70 (251)
T 2wqk_A 3 TFLLVNDDGY-FSPGINALREALKSLG-RVVVVAPDRNLSGVGHS------LTFTEPLKMRKIDTDFYT-VI--DGT-PA 70 (251)
T ss_dssp EEEEECSSCT-TCHHHHHHHHHHTTTS-EEEEEEESSCCTTSCCS------CCCSSCEEEEEEETTEEE-ET--TCC-HH
T ss_pred EEEEEcCCCC-CcHHHHHHHHHHHhCC-CEEEEeeCCCCcccccC------cCCCCCceeEEeecccee-ec--CCC-hH
Confidence 6777766554 3345889999999999 59999886543332111 111112333333210000 00 000 11
Q ss_pred HHHhhchhcHHHHHHHHhcCCCCCeEEEEC----------CCcc---hHHHHHHHcCCCeEEEcc
Q 011792 88 WFCSNKPVSKLAFRQLLMTPGRLPTCIISD----------SIMS---FAIDVAEELNIPIITFRP 139 (477)
Q Consensus 88 ~~~~~~~~~~~~l~~~l~~~~~~~D~vI~D----------~~~~---~~~~~A~~lgiP~v~~~~ 139 (477)
-|- .-.+..++.+. +||+||+. .++. +|++-|..+|||.|.++.
T Consensus 71 DCV------~lal~~~l~~~--~PDLVvSGIN~G~N~g~dv~ySGTVgAA~Ea~~~GipaIA~S~ 127 (251)
T 2wqk_A 71 DCV------HLGYRVILEEK--KPDLVLSGINEGPNLGEDITYSGTVSGAMEGRILGIPSIAFSA 127 (251)
T ss_dssp HHH------HHHHHTTTTTC--CCSEEEEEEESSCCCGGGGGGCHHHHHHHHHHHTTCCEEEEEE
T ss_pred HHH------hhhhhhhcCCC--CCCEEEeCccCCCccccceecchHHHHHHHHHhcCCCeEEEEc
Confidence 111 11233334333 89999993 3333 567788889999999864
No 59
>1j9j_A Stationary phase surviVal protein; SURE protein, unknown function; 1.90A {Thermotoga maritima} SCOP: c.106.1.1 PDB: 1ilv_A 1j9k_A* 1j9l_A*
Probab=88.96 E-value=2.1 Score=37.94 Aligned_cols=113 Identities=15% Similarity=0.126 Sum_probs=61.5
Q ss_pred CEEEEEcCCCCCCHHHHHHHHHHHHhCCCeEEEEeCCccchhccCCCcccccccCCCCeEEEeCCCCCCCCCCCCCCChH
Q 011792 7 PHVVLLPFPAYGHIKPMLSLAKLFSHAGFRITFVNTDQYHDRLFGNTDVTAFYKHFPNFLCTSIPDGLPPDNPRFGIYTK 86 (477)
Q Consensus 7 ~~il~~~~~~~GHv~p~l~La~~L~~rGH~Vt~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 86 (477)
||||+..--|. |---+.+|+++|.+.| +|+++.|.....-.... ......+.+..++.+ . ...
T Consensus 1 M~ILlTNDDGi-~apGi~aL~~~l~~~g-~V~VVAP~~~~Sg~g~s------iTl~~pl~~~~~~~~--~-------~~~ 63 (247)
T 1j9j_A 1 MRILVTNDDGI-QSKGIIVLAELLSEEH-EVFVVAPDKERSATGHS------ITIHVPLWMKKVFIS--E-------RVV 63 (247)
T ss_dssp CEEEEECSSCT-TCHHHHHHHHHHTTTS-EEEEEEESSCCTTCTTC------CCCSSCCCEEECCCS--S-------SEE
T ss_pred CeEEEEcCCCC-CcHhHHHHHHHHHhCC-CEEEEecCCCCcCCccc------ccCCCCeEEEEeccC--C-------CCc
Confidence 57777666554 4445889999999988 89999996654332221 111112444444321 0 000
Q ss_pred HH-HHhhchhc-HHHHHHHHhcCCCCCeEEEECC----------Ccc---hHHHHHHHcCCCeEEEcc
Q 011792 87 DW-FCSNKPVS-KLAFRQLLMTPGRLPTCIISDS----------IMS---FAIDVAEELNIPIITFRP 139 (477)
Q Consensus 87 ~~-~~~~~~~~-~~~l~~~l~~~~~~~D~vI~D~----------~~~---~~~~~A~~lgiP~v~~~~ 139 (477)
.+ +.-.=.-| .-.+..++. .+||+||+.. ++. +|++=|..+|||.|.++.
T Consensus 64 ~~~v~GTPaDCV~lal~~l~~---~~PDLVvSGIN~G~Nlg~dv~ySGTVgAA~Ea~~~GiPaIA~S~ 128 (247)
T 1j9j_A 64 AYSTTGTPADCVKLAYNVVMD---KRVDLIVSGVNRGPNMGMDILHSGTVSGAMEGAMMNIPSIAISS 128 (247)
T ss_dssp EEEESSCHHHHHHHHHHTTST---TCCSEEEEEEEESCCCGGGGGGCHHHHHHHHHHHTTCCEEEEEE
T ss_pred eEEECCcHHHHHHHHHHhhcc---CCCCEEEECCccCCCCCcCeecchhHHHHHHHHhcCCCeEEEec
Confidence 00 00000001 112233332 3899999843 222 566777889999999865
No 60
>3vue_A GBSS-I, granule-bound starch synthase 1, chloroplastic/amyloplastic; rossmann fold, glycosyltransferase, transferase; 2.70A {Oryza sativa japonica group} PDB: 3vuf_A*
Probab=88.35 E-value=0.45 Score=47.99 Aligned_cols=37 Identities=16% Similarity=0.250 Sum_probs=28.3
Q ss_pred CCEEEEEcCCCC-----CCH-HHHHHHHHHHHhCCCeEEEEeC
Q 011792 6 VPHVVLLPFPAY-----GHI-KPMLSLAKLFSHAGFRITFVNT 42 (477)
Q Consensus 6 ~~~il~~~~~~~-----GHv-~p~l~La~~L~~rGH~Vt~~~~ 42 (477)
+|||++++.-.. |=+ .-.-+|.++|+++||+|++++|
T Consensus 9 ~MkIl~vs~E~~P~~K~GGLadvv~~L~~aL~~~G~~V~Vi~P 51 (536)
T 3vue_A 9 HMNVVFVGAEMAPWSKTGGLGDVLGGLPPAMAANGHRVMVISP 51 (536)
T ss_dssp CCEEEEECSCBTTTBCSSHHHHHHHHHHHHHHTTTCEEEEEEE
T ss_pred CcEEEEEEEeccchhccCcHHHHHHHHHHHHHHcCCeEEEEec
Confidence 799999975311 111 3466899999999999999996
No 61
>2e6c_A 5'-nucleotidase SURE; SURE protein, cowith manganese ION and AMP hydrolase; 2.05A {Thermus thermophilus} PDB: 2e6b_A 2e69_A 2e6e_A 2e6g_A 2e6h_A
Probab=86.40 E-value=5.2 Score=35.37 Aligned_cols=115 Identities=11% Similarity=-0.001 Sum_probs=62.6
Q ss_pred CEEEEEcCCCCCCHHHHHHHHHHHHhCCCeEEEEeCCccchhccCCCcccccccCCCCeEEEeCCCCCCCCCCCCCCChH
Q 011792 7 PHVVLLPFPAYGHIKPMLSLAKLFSHAGFRITFVNTDQYHDRLFGNTDVTAFYKHFPNFLCTSIPDGLPPDNPRFGIYTK 86 (477)
Q Consensus 7 ~~il~~~~~~~GHv~p~l~La~~L~~rGH~Vt~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 86 (477)
||||+..--|. +---+.+|+++|.+.| +|+++.|.....-.... ......+.+..++.+.+.... ..
T Consensus 1 M~ILlTNDDGi-~apGi~aL~~~l~~~g-~V~VVAP~~~~Sg~g~s------iTl~~pl~~~~~~~~~~~~~~----~~- 67 (244)
T 2e6c_A 1 MRILVTNDDGI-YSPGLWALAEAASQFG-EVFVAAPDTEQSAAGHA------ITIAHPVRAYPHPSPLHAPHF----PA- 67 (244)
T ss_dssp CEEEEECSSCT-TCHHHHHHHHHHTTTS-EEEEEEECSSCCCCCSS------CCCSSCBEEEECCCCTTSCCC----CE-
T ss_pred CeEEEEcCCCC-CcHhHHHHHHHHHhCC-CEEEEecCCCCcCCccc------ccCCCCeEEEEeccCcCCCCC----ce-
Confidence 57777766554 4445889999999988 89999996653332221 122223666665432110000 00
Q ss_pred HHHHhhchhcH-HHHHHHHhcCCCCCeEEEECC----------Ccc---hHHHHHHHcCCCeEEEcc
Q 011792 87 DWFCSNKPVSK-LAFRQLLMTPGRLPTCIISDS----------IMS---FAIDVAEELNIPIITFRP 139 (477)
Q Consensus 87 ~~~~~~~~~~~-~~l~~~l~~~~~~~D~vI~D~----------~~~---~~~~~A~~lgiP~v~~~~ 139 (477)
..+.-.=.-|. -.+. +. .+||+||+.. ++. +|++-|..+|||.|.++.
T Consensus 68 ~~v~GTPaDCV~lal~--l~---~~PDLVvSGIN~G~Nlg~dv~ySGTVgAA~Ea~~~GiPaIA~S~ 129 (244)
T 2e6c_A 68 YRVRGTPADCVALGLH--LF---GPVDLVLSGVNLGSNLGHEIWHSGTVAAAKQGYLFGLSAAAFSV 129 (244)
T ss_dssp EEEESCHHHHHHHHHH--HS---CSCCEEEEEEEESCCCGGGGGGCHHHHHHHHHHHTTCEEEEEEE
T ss_pred EEEcCcHHHHHHHHHc--CC---CCCCEEEECCccCCCCCcCeechHhHHHHHHHHhcCCCeEEEec
Confidence 00000000011 1122 32 2899999842 222 566777889999999865
No 62
>1l5x_A SurviVal protein E; structural genomics, putative acid phosphatase, mixed alpha/ protein, N-terminal rossmann-fold like; 2.00A {Pyrobaculum aerophilum} SCOP: c.106.1.1
Probab=85.30 E-value=5.6 Score=35.95 Aligned_cols=113 Identities=13% Similarity=0.004 Sum_probs=61.6
Q ss_pred CEEEEEcCCCCCCHHHHHHHHHHHHhCCCeEEEEeCCccchhccCCCcccccccCCCCeEEEeCCCCCCCCCCCCCCChH
Q 011792 7 PHVVLLPFPAYGHIKPMLSLAKLFSHAGFRITFVNTDQYHDRLFGNTDVTAFYKHFPNFLCTSIPDGLPPDNPRFGIYTK 86 (477)
Q Consensus 7 ~~il~~~~~~~GHv~p~l~La~~L~~rGH~Vt~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 86 (477)
||||+..--|. +---+.+|+++|.+.| +|+++.|.....-..... .....+.+..++.+ +. ..
T Consensus 1 M~ILlTNDDGi-~ApGi~aL~~aL~~~g-~V~VVAP~~~qSg~g~si------Tl~~pl~~~~~~~~---~~------~~ 63 (280)
T 1l5x_A 1 MKILVTNDDGV-HSPGLRLLYQFALSLG-DVDVVAPESPKSATGLGI------TLHKPLRMYEVDLC---GF------RA 63 (280)
T ss_dssp CEEEEECSSCT-TCHHHHHHHHHHGGGS-EEEEEEESSCTTTSCSSC------CCSSCBCEEEEECS---SS------EE
T ss_pred CeEEEEcCCCC-CcHhHHHHHHHHHhCC-CEEEEecCCCCcCCcccc------cCCCCeEEEEeccC---CC------ce
Confidence 57777766554 4445889999999988 999999966543322211 11112334333211 00 00
Q ss_pred HHHHhhchhc-HHHHHHHHhcCCCCCeEEEEC-----------CCcc---hHHHHHHHcCCCeEEEccC
Q 011792 87 DWFCSNKPVS-KLAFRQLLMTPGRLPTCIISD-----------SIMS---FAIDVAEELNIPIITFRPY 140 (477)
Q Consensus 87 ~~~~~~~~~~-~~~l~~~l~~~~~~~D~vI~D-----------~~~~---~~~~~A~~lgiP~v~~~~~ 140 (477)
..+.-.=.-| .-.+..+ .. +||+||+. .++. +|++=|..+|||.|.++..
T Consensus 64 ~~v~GTPaDCV~lal~~l--~~--~PDLVvSGIN~G~Nlg~d~v~ySGTVgAA~Ea~~~GiPaIA~S~~ 128 (280)
T 1l5x_A 64 IATSGTPSDTVYLATFGL--GR--KYDIVLSGINLGDNTSLQVILSSGTLGAAFQAALLGIPALAYSAY 128 (280)
T ss_dssp EEESSCHHHHHHHHHHHH--TS--CCSEEEEEEEEBCCCSHHHHTTCHHHHHHHHHHHTTCCEEEEEEC
T ss_pred EEECCcHHHHHHHHHhcC--CC--CCCEEEECCccCCcCCccccccchhHHHHHHHHHcCCCeEEEEcc
Confidence 0000000001 1223444 22 89999984 2222 5666778899999999764
No 63
>3fgn_A Dethiobiotin synthetase; biotin biosynthesis, BIOD, ATP-BIND ligase, magnesium, nucleotide-binding; 1.85A {Mycobacterium tuberculosis} PDB: 3fmf_A* 3fmi_A* 3fpa_A*
Probab=83.35 E-value=7.1 Score=34.73 Aligned_cols=124 Identities=10% Similarity=-0.011 Sum_probs=69.7
Q ss_pred CCEEEEEcCC--CCCCHHHHHHHHHHHHhCCCeEEEEeCC---c-----cchhccCCCcccccccCCCCeEEEeCCCCCC
Q 011792 6 VPHVVLLPFP--AYGHIKPMLSLAKLFSHAGFRITFVNTD---Q-----YHDRLFGNTDVTAFYKHFPNFLCTSIPDGLP 75 (477)
Q Consensus 6 ~~~il~~~~~--~~GHv~p~l~La~~L~~rGH~Vt~~~~~---~-----~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~ 75 (477)
+|+.++++.. +-|-..-...|++.|+++|++|.++=+- . ....+.+..+. ....+.+.+.....
T Consensus 25 ~m~~i~Itgt~t~vGKT~vt~gL~~~l~~~G~~V~~fKPv~~g~~~~~~D~~~~~~~~g~------~~~~~~~~~~~p~s 98 (251)
T 3fgn_A 25 HMTILVVTGTGTGVGKTVVCAALASAARQAGIDVAVCKPVQTGTARGDDDLAEVGRLAGV------TQLAGLARYPQPMA 98 (251)
T ss_dssp SCEEEEEEESSTTSCHHHHHHHHHHHHHHTTCCEEEEEEEECCGGGTCCHHHHHHHHHCC------CEEEEEEECSSSSC
T ss_pred CCCEEEEEeCCCCCcHHHHHHHHHHHHHHCCCeEEEEeeeecCCCCCCHHHHHHHHHcCC------CCCCCCeeECCCCC
Confidence 4666666553 4488899999999999999999998431 0 01111111110 00011122210000
Q ss_pred CCCCCCCCChHHHHHhhchhcHHHHHHHHhcCCCCCeEEEECCCc----------chHHHHHHHcCCCeEEEccCch
Q 011792 76 PDNPRFGIYTKDWFCSNKPVSKLAFRQLLMTPGRLPTCIISDSIM----------SFAIDVAEELNIPIITFRPYSA 142 (477)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~D~vI~D~~~----------~~~~~~A~~lgiP~v~~~~~~~ 142 (477)
......++.........+.+.+++...++|+||+|... ...+.+|+.++.|++.+.....
T Consensus 99 -------P~~aa~~~~~~~~~~~~i~~~~~~l~~~~D~vlIEGagGl~~pl~~~~~~~adla~~l~~pVILV~~~~~ 168 (251)
T 3fgn_A 99 -------PAAAAEHAGMALPARDQIVRLIADLDRPGRLTLVEGAGGLLVELAEPGVTLRDVAVDVAAAALVVVTADL 168 (251)
T ss_dssp -------HHHHHHHTTCCCCCHHHHHHHHHTTCCTTCEEEEECSSSTTCEEETTTEEHHHHHHHTTCEEEEEECSST
T ss_pred -------hHHHHHHcCCCCCCHHHHHHHHHHHHhcCCEEEEECCCCCcCCcCcccchHHHHHHHcCCCEEEEEcCCC
Confidence 00001111110123456777777755589999998741 2457799999999999877654
No 64
>2x0d_A WSAF; GT4 family, transferase; HET: MSE; 2.28A {Geobacillus stearothermophilus} PDB: 2x0f_A* 2x0e_A*
Probab=83.08 E-value=0.56 Score=45.58 Aligned_cols=38 Identities=26% Similarity=0.299 Sum_probs=31.0
Q ss_pred CCEEEEEcCCCC-----CCHHHHHHHHHHHHhCCCeEEEEeCC
Q 011792 6 VPHVVLLPFPAY-----GHIKPMLSLAKLFSHAGFRITFVNTD 43 (477)
Q Consensus 6 ~~~il~~~~~~~-----GHv~p~l~La~~L~~rGH~Vt~~~~~ 43 (477)
+|||++++.... |=......||++|+++||+|++++..
T Consensus 46 ~mrI~~v~~~~~p~~~~GG~~~v~~la~~L~~~GheV~Vvt~~ 88 (413)
T 2x0d_A 46 GKRLNLLVPSINQEHMFGGISTALKLFEQFDNKKFKKRIILTD 88 (413)
T ss_dssp SCEEEEEESCCCGGGCSHHHHHHHHHHTTSCTTTCEEEEEESS
T ss_pred CceEEEEeCCCCccccccHHHHHHHHHHHHHHcCCceEEEEec
Confidence 699999886422 33456899999999999999999985
No 65
>1uqt_A Alpha, alpha-trehalose-phosphate synthase; glycosyltransferase, transferase; HET: U2F; 2.0A {Escherichia coli} SCOP: c.87.1.6 PDB: 1uqu_A* 2wtx_A* 1gz5_A*
Probab=80.54 E-value=7.5 Score=38.37 Aligned_cols=105 Identities=10% Similarity=0.109 Sum_probs=62.2
Q ss_pred eeccCHHH---HHhccccccccc---ccCch-hHHHHhhcCC-----ceecCCccchhhhhHHHHhhhhceeeeccCCCC
Q 011792 352 VSWAPQEE---VLAHQAIGGFLT---HSGWN-STLESMVAGV-----PMICWPQVGDQQVNSRCVSEIWKIGFDMKDTCD 419 (477)
Q Consensus 352 ~~~~p~~~---ll~~~~~~~~I~---HGG~g-s~~eal~~Gv-----P~l~~P~~~DQ~~na~rv~~~~G~G~~l~~~~~ 419 (477)
.+++++.+ ++..+++ ||. .=|+| ++.||+++|+ |+|+.-+.+ .+..+ .-|+.+ ...+
T Consensus 337 ~g~v~~~el~~ly~~ADv--~v~pS~~EGfgLv~lEAmA~g~~~~~gpvV~S~~~G----~~~~l----~~g~lv-~p~d 405 (482)
T 1uqt_A 337 NQHFDRKLLMKIFRYSDV--GLVTPLRDGMNLVAKEYVAAQDPANPGVLVLSQFAG----AANEL----TSALIV-NPYD 405 (482)
T ss_dssp CSCCCHHHHHHHHHHCSE--EEECCSSBSCCHHHHHHHHHSCTTSCCEEEEETTBG----GGGTC----TTSEEE-CTTC
T ss_pred CCCCCHHHHHHHHHHccE--EEECCCcccCCchHHHHHHhCCCCCCCCEEEECCCC----CHHHh----CCeEEE-CCCC
Confidence 47888776 5666777 664 33554 8899999998 666654332 11112 124444 3468
Q ss_pred HHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHH
Q 011792 420 RSTIEKLVRDLMDNKRDKIMESTVQIAKMARDAVKEGGSSYRNLEKLIEDIRL 472 (477)
Q Consensus 420 ~~~l~~~v~~ll~~~~~~~~~~a~~l~~~~~~~~~~gg~~~~~~~~~i~~~~~ 472 (477)
.++++++|.++|++....-+++.+++.+.+++ - +....++.+++.+..
T Consensus 406 ~~~lA~ai~~lL~~~~~~r~~~~~~~~~~v~~----~-s~~~~a~~~l~~l~~ 453 (482)
T 1uqt_A 406 RDEVAAALDRALTMSLAERISRHAEMLDVIVK----N-DINHWQECFISDLKQ 453 (482)
T ss_dssp HHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHH----T-CHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHh----C-CHHHHHHHHHHHHHh
Confidence 99999999999983112223333344444433 2 445566777766644
No 66
>3vot_A L-amino acid ligase, BL00235; ATP-grAsp motif, ATP-binding; HET: ADP PG4; 1.80A {Bacillus licheniformis}
Probab=79.68 E-value=6 Score=38.27 Aligned_cols=99 Identities=16% Similarity=0.136 Sum_probs=52.5
Q ss_pred CCCCCCCEEEEEcCCCCCCHHHHHHHHHHHHhCCCeEEEEeCCccchhccCCCcccccccCCCCeEEEeCCCCCCCCCCC
Q 011792 1 MEQTRVPHVVLLPFPAYGHIKPMLSLAKLFSHAGFRITFVNTDQYHDRLFGNTDVTAFYKHFPNFLCTSIPDGLPPDNPR 80 (477)
Q Consensus 1 m~~~~~~~il~~~~~~~GHv~p~l~La~~L~~rGH~Vt~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 80 (477)
|... ++||+++..+.... -+.++.++.|++|+++.+.... ...... ..-.++.++.
T Consensus 1 M~~~-~k~l~Il~~~~~~~-----~i~~aa~~lG~~vv~v~~~~~~--~~~~~~--------~~d~~~~~~~-------- 56 (425)
T 3vot_A 1 MTKR-NKNLAIICQNKHLP-----FIFEEAERLGLKVTFFYNSAED--FPGNLP--------AVERCVPLPL-------- 56 (425)
T ss_dssp -CCC-CCEEEEECCCTTCC-----HHHHHHHHTTCEEEEEEETTSC--CCCSCT--------TEEEEEEECT--------
T ss_pred CCCC-CcEEEEECCChhHH-----HHHHHHHHCCCEEEEEECCCcc--cccCHh--------hccEEEecCC--------
Confidence 6654 57888887654322 3567778889999998764321 000000 0023343331
Q ss_pred CCCChHHHHHhhchhcHHHHHHHHhcCCCCCeEEEECC--CcchHHHHHHHcCCCe
Q 011792 81 FGIYTKDWFCSNKPVSKLAFRQLLMTPGRLPTCIISDS--IMSFAIDVAEELNIPI 134 (477)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~D~vI~D~--~~~~~~~~A~~lgiP~ 134 (477)
..+...++ ..+.++.++. ++|.|++-. ....+..+|+.+|+|.
T Consensus 57 -~~d~~~~~--------~~~~~~~~~~--~id~V~~~~e~~~~~~a~l~e~lglpg 101 (425)
T 3vot_A 57 -FEDEEAAM--------DVVRQTFVEF--PFDGVMTLFEPALPFTAKAAEALNLPG 101 (425)
T ss_dssp -TTCHHHHH--------HHHHHHHHHS--CCSEEECCCGGGHHHHHHHHHHTTCSS
T ss_pred -CCCHHHHH--------HHHHHhhhhc--CCCEEEECCchhHHHHHHHHHHcCCCC
Confidence 11112222 2344444444 899998632 2225667889999994
No 67
>3nb0_A Glycogen [starch] synthase isoform 2; glycogen synthase, glucose-6-phosphate, yeast, allosteric AC transferase; HET: G6P; 2.41A {Saccharomyces cerevisiae} PDB: 3rt1_A* 3nch_A 3naz_A 3o3c_A* 3rsz_A*
Probab=78.56 E-value=6.7 Score=40.27 Aligned_cols=73 Identities=16% Similarity=0.177 Sum_probs=44.3
Q ss_pred eccCH---------HHHHhcccccccccc---cCc-hhHHHHhhcCCceecCCccchhhhhHHHHhh------hhceeee
Q 011792 353 SWAPQ---------EEVLAHQAIGGFLTH---SGW-NSTLESMVAGVPMICWPQVGDQQVNSRCVSE------IWKIGFD 413 (477)
Q Consensus 353 ~~~p~---------~~ll~~~~~~~~I~H---GG~-gs~~eal~~GvP~l~~P~~~DQ~~na~rv~~------~~G~G~~ 413 (477)
.|++. ..++..+++ ||.= =|+ .+.+||+++|+|+|+.-..+ ...-|.+ .-+.|+.
T Consensus 499 ~~L~~~d~lf~~d~~~~~~~adv--fV~PS~~EgfGl~~LEAmA~G~PvI~s~~gG----~~d~V~dg~~~~~~~~tG~l 572 (725)
T 3nb0_A 499 EFLNANNPILGLDYDEFVRGCHL--GVFPSYYEPWGYTPAECTVMGVPSITTNVSG----FGSYMEDLIETNQAKDYGIY 572 (725)
T ss_dssp SCCCTTCSSSCCCHHHHHHHCSE--EECCCSSBSSCHHHHHHHHTTCCEEEETTBH----HHHHHHTTSCHHHHHHTTEE
T ss_pred cccCCCCccchhHHHHHHhhceE--EEeccccCCCCHHHHHHHHcCCCEEEeCCCC----hhhhhhccccccCCCCceEE
Confidence 77765 458888888 6643 344 58999999999999875533 1111111 0134554
Q ss_pred cc--CCCCHHHHHHHHHHHH
Q 011792 414 MK--DTCDRSTIEKLVRDLM 431 (477)
Q Consensus 414 l~--~~~~~~~l~~~v~~ll 431 (477)
+. ...+.+++.+++.++|
T Consensus 573 V~~rd~~d~ee~aeaLa~aL 592 (725)
T 3nb0_A 573 IVDRRFKAPDESVEQLVDYM 592 (725)
T ss_dssp EECCSSSCHHHHHHHHHHHH
T ss_pred EeCCCCCCHHHHHHHHHHHH
Confidence 43 3456666666665555
No 68
>1g5t_A COB(I)alamin adenosyltransferase; P-loop protein, cobalamin biosynthesis, RECA fold; HET: ATP; 1.80A {Salmonella typhimurium} SCOP: c.37.1.11 PDB: 1g5r_A* 1g64_A*
Probab=77.55 E-value=15 Score=31.19 Aligned_cols=104 Identities=9% Similarity=0.010 Sum_probs=61.3
Q ss_pred CCEEEEEcCCCCCCHHHHHHHHHHHHhCCCeEEEEeCCccchhccCCCcccccccCCCCeEEEeCCCCCCCCCCCCCCCh
Q 011792 6 VPHVVLLPFPAYGHIKPMLSLAKLFSHAGFRITFVNTDQYHDRLFGNTDVTAFYKHFPNFLCTSIPDGLPPDNPRFGIYT 85 (477)
Q Consensus 6 ~~~il~~~~~~~GHv~p~l~La~~L~~rGH~Vt~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 85 (477)
+-.|.+++..+.|-..-.+.+|-..+.+|++|.|+..-... .. .+........ .+++.....++.. .....
T Consensus 28 ~g~i~v~tG~GkGKTTaA~GlalRA~g~G~rV~~vQF~Kg~---~~-~gE~~~l~~L-~v~~~~~g~gf~~----~~~~~ 98 (196)
T 1g5t_A 28 RGIIIVFTGNGKGKTTAAFGTAARAVGHGKNVGVVQFIKGT---WP-NGERNLLEPH-GVEFQVMATGFTW----ETQNR 98 (196)
T ss_dssp CCCEEEEESSSSCHHHHHHHHHHHHHHTTCCEEEEESSCCS---SC-CHHHHHHGGG-TCEEEECCTTCCC----CGGGH
T ss_pred CceEEEECCCCCCHHHHHHHHHHHHHHCCCeEEEEEeeCCC---CC-ccHHHHHHhC-CcEEEEccccccc----CCCCc
Confidence 34688999999999999999999999999999999753311 00 0100112222 2888888764432 11111
Q ss_pred HHHHHhhchhcHHHHHHHHhcCCCCCeEEEECCCcc
Q 011792 86 KDWFCSNKPVSKLAFRQLLMTPGRLPTCIISDSIMS 121 (477)
Q Consensus 86 ~~~~~~~~~~~~~~l~~~l~~~~~~~D~vI~D~~~~ 121 (477)
..- ..........+.+.+.+. ++|+||.|-+.+
T Consensus 99 ~~~-~~~a~~~l~~a~~~l~~~--~yDlvILDEi~~ 131 (196)
T 1g5t_A 99 EAD-TAACMAVWQHGKRMLADP--LLDMVVLDELTY 131 (196)
T ss_dssp HHH-HHHHHHHHHHHHHHTTCT--TCSEEEEETHHH
T ss_pred HHH-HHHHHHHHHHHHHHHhcC--CCCEEEEeCCCc
Confidence 111 111122233344444433 899999998643
No 69
>2gt1_A Lipopolysaccharide heptosyltransferase-1; GT-B fold; 1.90A {Escherichia coli UTI89} PDB: 2h1f_A* 2h1h_A*
Probab=77.39 E-value=9 Score=35.31 Aligned_cols=45 Identities=13% Similarity=0.178 Sum_probs=39.1
Q ss_pred CEEEEEcCCCCCCHHHHHHHHHHHHhC--CCeEEEEeCCccchhccC
Q 011792 7 PHVVLLPFPAYGHIKPMLSLAKLFSHA--GFRITFVNTDQYHDRLFG 51 (477)
Q Consensus 7 ~~il~~~~~~~GHv~p~l~La~~L~~r--GH~Vt~~~~~~~~~~l~~ 51 (477)
|||+++-..+.|++.-..++.++|+++ +.++++++.+.+.+.+..
T Consensus 1 ~~ILii~~~~iGD~i~~~p~l~~Lk~~~P~a~I~~l~~~~~~~l~~~ 47 (326)
T 2gt1_A 1 MRVLIVKTSSMGDVLHTLPALTDAQQAIPGIKFDWVVEEGFAQIPSW 47 (326)
T ss_dssp CEEEEECCCCHHHHHHHHHHHHHHHHHSTTCEEEEEEEGGGTHHHHT
T ss_pred CeEEEEeccccchHHhHHHHHHHHHHhCCCCEEEEEEehhhhHHHhc
Confidence 589999999999999999999999987 999999999776555433
No 70
>1kjn_A MTH0777; hypotethical protein, structural genomics, PSI, protein structure initiative; 2.20A {Methanothermobacterthermautotrophicus} SCOP: c.115.1.1
Probab=76.43 E-value=4 Score=32.61 Aligned_cols=44 Identities=16% Similarity=0.244 Sum_probs=30.0
Q ss_pred CCCCCCCEEEEEcC-CCC-CCHHHHHHHHHHHHhCCCeEEEEeCCc
Q 011792 1 MEQTRVPHVVLLPF-PAY-GHIKPMLSLAKLFSHAGFRITFVNTDQ 44 (477)
Q Consensus 1 m~~~~~~~il~~~~-~~~-GHv~p~l~La~~L~~rGH~Vt~~~~~~ 44 (477)
|.+...|+++++-. |.. ..+--.+=+...|..+||+|++++++.
T Consensus 1 ~~~~~~m~~LilLGCPE~Pvq~p~~lYl~~~Lk~~G~~v~VA~npA 46 (157)
T 1kjn_A 1 MKTESTGKALMVLGCPESPVQIPLAIYTSHKLKKKGFRVTVTANPA 46 (157)
T ss_dssp -----CCEEEEECCCSCSTTHHHHHHHHHHHHHHTTCEEEEEECHH
T ss_pred CccccceeeeEEecCCCCcchhhHHHHHHHHHHhcCCeeEEecCHH
Confidence 55555788877765 433 444557778999999999999999854
No 71
>2lnd_A De novo designed protein, PFK fold; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Artificial gene}
Probab=75.92 E-value=2.7 Score=29.25 Aligned_cols=50 Identities=16% Similarity=0.308 Sum_probs=34.6
Q ss_pred hcCCceecCCccchhhhhHHHHhh--hhceeeeccCCCCHHHHHHHHHHHHh
Q 011792 383 VAGVPMICWPQVGDQQVNSRCVSE--IWKIGFDMKDTCDRSTIEKLVRDLMD 432 (477)
Q Consensus 383 ~~GvP~l~~P~~~DQ~~na~rv~~--~~G~G~~l~~~~~~~~l~~~v~~ll~ 432 (477)
-+|+|++++--...|.+.-..--+ +-|+.-.+-++.+++++.+.+++.|.
T Consensus 49 dngkplvvfvngasqndvnefqneakkegvsydvlkstdpeeltqrvreflk 100 (112)
T 2lnd_A 49 DNGKPLVVFVNGASQNDVNEFQNEAKKEGVSYDVLKSTDPEELTQRVREFLK 100 (112)
T ss_dssp TCCSCEEEEECSCCHHHHHHHHHHHHHHTCEEEEEECCCHHHHHHHHHHHHH
T ss_pred hcCCeEEEEecCcccccHHHHHHHHHhcCcchhhhccCCHHHHHHHHHHHHH
Confidence 368999988777777664422212 22444444478999999999999886
No 72
>4dzz_A Plasmid partitioning protein PARF; deviant walker BOX, DNA segregation, unknown function; HET: ADP; 1.80A {Escherichia coli} PDB: 4e03_A* 4e07_A* 4e09_A*
Probab=75.51 E-value=8.5 Score=32.52 Aligned_cols=37 Identities=24% Similarity=0.451 Sum_probs=29.6
Q ss_pred EEEEEc--CCCCCCHHHHHHHHHHHHhCCCeEEEEeCCc
Q 011792 8 HVVLLP--FPAYGHIKPMLSLAKLFSHAGFRITFVNTDQ 44 (477)
Q Consensus 8 ~il~~~--~~~~GHv~p~l~La~~L~~rGH~Vt~~~~~~ 44 (477)
+++.+. -||-|-..-...||..|+++|++|.++-.+.
T Consensus 2 ~vi~v~s~kgG~GKTt~a~~la~~la~~g~~vlliD~D~ 40 (206)
T 4dzz_A 2 KVISFLNPKGGSGKTTAVINIATALSRSGYNIAVVDTDP 40 (206)
T ss_dssp EEEEECCSSTTSSHHHHHHHHHHHHHHTTCCEEEEECCT
T ss_pred eEEEEEeCCCCccHHHHHHHHHHHHHHCCCeEEEEECCC
Confidence 444443 3677989999999999999999999997643
No 73
>3t5t_A Putative glycosyltransferase; GTB fold, pseudoglycosyltransferase; 1.70A {Streptomyces hygroscopicus} PDB: 4f97_A* 4f96_B* 4f9f_A* 3t7d_A*
Probab=75.49 E-value=11 Score=37.12 Aligned_cols=110 Identities=10% Similarity=0.052 Sum_probs=67.7
Q ss_pred CCceeeccCHHH---HHhccccccccc---ccCchh-HHHHhhcC---CceecCCccchhhhhHHHHhhhhc-eeeeccC
Q 011792 348 RGCIVSWAPQEE---VLAHQAIGGFLT---HSGWNS-TLESMVAG---VPMICWPQVGDQQVNSRCVSEIWK-IGFDMKD 416 (477)
Q Consensus 348 nv~~~~~~p~~~---ll~~~~~~~~I~---HGG~gs-~~eal~~G---vP~l~~P~~~DQ~~na~rv~~~~G-~G~~l~~ 416 (477)
.|.+...+|+.+ ++..+++ ++. .=|+|. ..|++++| .|+|+--+.+ .+.. +| -|+.+ .
T Consensus 353 ~V~f~g~v~~~el~aly~~ADv--~vv~SlrEGfgLv~~EamA~~~~~g~lVlSe~aG----a~~~----l~~~allV-n 421 (496)
T 3t5t_A 353 TVRIDNDNDVNHTIACFRRADL--LIFNSTVDGQNLSTFEAPLVNERDADVILSETCG----AAEV----LGEYCRSV-N 421 (496)
T ss_dssp SEEEEECCCHHHHHHHHHHCSE--EEECCSSBSCCSHHHHHHHHCSSCCEEEEETTBT----THHH----HGGGSEEE-C
T ss_pred CEEEeCCCCHHHHHHHHHhccE--EEECcccccCChhHHHHHHhCCCCCCEEEeCCCC----CHHH----hCCCEEEE-C
Confidence 466778888755 5556776 553 458874 58999996 6666553332 1222 22 35555 4
Q ss_pred CCCHHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHh
Q 011792 417 TCDRSTIEKLVRDLMDNKRDKIMESTVQIAKMARDAVKEGGSSYRNLEKLIEDIRLM 473 (477)
Q Consensus 417 ~~~~~~l~~~v~~ll~~~~~~~~~~a~~l~~~~~~~~~~gg~~~~~~~~~i~~~~~~ 473 (477)
..+.+.++++|.++|++..++-+++.+++.+.+++ . ....-++.+++++...
T Consensus 422 P~D~~~lA~AI~~aL~m~~~er~~r~~~~~~~V~~----~-d~~~W~~~fl~~L~~~ 473 (496)
T 3t5t_A 422 PFDLVEQAEAISAALAAGPRQRAEAAARRRDAARP----W-TLEAWVQAQLDGLAAD 473 (496)
T ss_dssp TTBHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHTT----C-BHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHH----C-CHHHHHHHHHHHHhhc
Confidence 56899999999999984213334445555555443 2 3455577777777543
No 74
>2gt1_A Lipopolysaccharide heptosyltransferase-1; GT-B fold; 1.90A {Escherichia coli UTI89} PDB: 2h1f_A* 2h1h_A*
Probab=74.61 E-value=2.5 Score=39.21 Aligned_cols=134 Identities=9% Similarity=0.033 Sum_probs=75.3
Q ss_pred CCcEEEEEecCcc---cCCHHHHHHHHHHHHhCCCcEEEEEecCCcCCCCCCCCCchhhHhhhcCCCceeeccC---HHH
Q 011792 286 SRSVLYVSFGSFI---KLSGDQILEFWHGIVNSGKGFLWVIRSDLIDGESGVGPVPAELDQGTKERGCIVSWAP---QEE 359 (477)
Q Consensus 286 ~~~~v~vs~Gs~~---~~~~~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~~p---~~~ 359 (477)
+++.|.+..|+.. ..+.+.+..+++.+.+.+.++++..+++... .......+.. +++.+.+-.+ -..
T Consensus 177 ~~~~i~l~pga~~~~k~wp~~~~~~l~~~L~~~~~~vvl~~g~~~e~------~~~~~i~~~~-~~~~l~g~~sl~el~a 249 (326)
T 2gt1_A 177 AGEYAVFLHATTRDDKHWPEEHWRELIGLLADSGIRIKLPWGAPHEE------ERAKRLAEGF-AYVEVLPKMSLEGVAR 249 (326)
T ss_dssp TTSEEEEECCCSSGGGSCCHHHHHHHHHHTTTTCCEEEECCSSHHHH------HHHHHHHTTC-TTEEECCCCCHHHHHH
T ss_pred CCCEEEEEeCCCCccccCCHHHHHHHHHHHHHCCCcEEEecCCHHHH------HHHHHHHhhC-CcccccCCCCHHHHHH
Confidence 4567888888754 3778888888888876677766654321000 0011111111 2332333222 344
Q ss_pred HHhcccccccccccCchhHHHHhhcCCceecC--Cccchh--hhhH-HHHhhhhceeeecc-CCCCHHHHHHHHHHHHhH
Q 011792 360 VLAHQAIGGFLTHSGWNSTLESMVAGVPMICW--PQVGDQ--QVNS-RCVSEIWKIGFDMK-DTCDRSTIEKLVRDLMDN 433 (477)
Q Consensus 360 ll~~~~~~~~I~HGG~gs~~eal~~GvP~l~~--P~~~DQ--~~na-~rv~~~~G~G~~l~-~~~~~~~l~~~v~~ll~~ 433 (477)
++.++++ +|+. -.|+++=|.+.|+|+|++ |..... +... .++.. |-.-. ...+++++.+++.++|++
T Consensus 250 li~~a~l--~I~~-DSG~~HlAaa~g~P~v~lfg~t~p~~~~P~~~~~~~~~----~~~~cm~~I~~~~V~~~i~~~l~~ 322 (326)
T 2gt1_A 250 VLAGAKF--VVSV-DTGLSHLTAALDRPNITVYGPTDPGLIGGYGKNQMVCR----APGNELSQLTANAVKQFIEENAEK 322 (326)
T ss_dssp HHHTCSE--EEEE-SSHHHHHHHHTTCCEEEEESSSCHHHHCCCSSSEEEEE----CGGGCGGGCCHHHHHHHHHHTTTT
T ss_pred HHHhCCE--EEec-CCcHHHHHHHcCCCEEEEECCCChhhcCCCCCCceEec----CCcccccCCCHHHHHHHHHHHHHH
Confidence 8888887 9998 345566677799999988 321111 1000 00000 10111 478999999999999874
No 75
>3qxc_A Dethiobiotin synthetase; DTBS, structural genomics, ATP BIND biology, protein structure initiative, midwest center for S genomics, MCSG; HET: ATP; 1.34A {Helicobacter pylori} PDB: 3mle_A* 3qxh_A* 3qxj_A* 3qxs_A* 3qxx_A* 3qy0_A* 2qmo_A
Probab=72.98 E-value=14 Score=32.55 Aligned_cols=46 Identities=13% Similarity=0.052 Sum_probs=33.5
Q ss_pred HHHHHHHHhcCCCCCeEEEECCCc---------chHHHHHHHcCCCeEEEccCch
Q 011792 97 KLAFRQLLMTPGRLPTCIISDSIM---------SFAIDVAEELNIPIITFRPYSA 142 (477)
Q Consensus 97 ~~~l~~~l~~~~~~~D~vI~D~~~---------~~~~~~A~~lgiP~v~~~~~~~ 142 (477)
...+.+.+++...++|+||+|... ...+.+|+.++.|++.+.....
T Consensus 118 ~~~I~~~~~~l~~~~D~vlIEGagGl~~pl~~~~~~adlA~~l~~pVILV~~~~l 172 (242)
T 3qxc_A 118 TDNLTQRLHNFTKTYDLVIVEGAGGLCVPITLEENMLDFALKLKAKMLLISHDNL 172 (242)
T ss_dssp HHHHHHHHHHGGGTCSEEEEECCSCTTCBSSSSCBHHHHHHHHTCEEEEEECCST
T ss_pred HHHHHHHHHHHHhcCCEEEEECCCCccccccccchHHHHHHHcCCCEEEEEcCCC
Confidence 455666666544489999998731 2457899999999999877654
No 76
>1ccw_A Protein (glutamate mutase); coenzyme B12, radical reaction, TIM-barrel rossman-fold, isomerase; HET: CNC TAR; 1.60A {Clostridium cochlearium} SCOP: c.23.6.1 PDB: 1cb7_A* 1b1a_A 1i9c_A* 1be1_A 1fmf_A 1id8_A*
Probab=70.79 E-value=6.4 Score=31.27 Aligned_cols=38 Identities=21% Similarity=0.193 Sum_probs=34.7
Q ss_pred CCEEEEEcCCCCCCHHHHHHHHHHHHhCCCeEEEEeCC
Q 011792 6 VPHVVLLPFPAYGHIKPMLSLAKLFSHAGFRITFVNTD 43 (477)
Q Consensus 6 ~~~il~~~~~~~GHv~p~l~La~~L~~rGH~Vt~~~~~ 43 (477)
+.+|++.+.++-.|-....-++..|..+|++|......
T Consensus 3 ~~~vvla~~~~d~HdiG~~~v~~~l~~~G~~Vi~lG~~ 40 (137)
T 1ccw_A 3 KKTIVLGVIGSDCHAVGNKILDHAFTNAGFNVVNIGVL 40 (137)
T ss_dssp CCEEEEEEETTCCCCHHHHHHHHHHHHTTCEEEEEEEE
T ss_pred CCEEEEEeCCCchhHHHHHHHHHHHHHCCCEEEECCCC
Confidence 46899999999999999999999999999999987653
No 77
>3ty2_A 5'-nucleotidase SURE; surviVal protein, phosphatase, hydrolase; HET: MSE; 1.89A {Coxiella burnetii} SCOP: c.106.1.0
Probab=70.10 E-value=5.9 Score=35.27 Aligned_cols=42 Identities=19% Similarity=0.078 Sum_probs=32.2
Q ss_pred CCCCCEEEEEcCCCCCCHHHHHHHHHHHHhCCCeEEEEeCCccc
Q 011792 3 QTRVPHVVLLPFPAYGHIKPMLSLAKLFSHAGFRITFVNTDQYH 46 (477)
Q Consensus 3 ~~~~~~il~~~~~~~GHv~p~l~La~~L~~rGH~Vt~~~~~~~~ 46 (477)
.+++|||++..--|. +---+.+|+++|.+ +|+|+++.|....
T Consensus 8 ~~~~m~ILlTNDDGi-~apGi~aL~~~l~~-~~~V~VVAP~~~~ 49 (261)
T 3ty2_A 8 ATPKLRLLLSNDDGV-YAKGLAILAKTLAD-LGEVDVVAPDRNR 49 (261)
T ss_dssp ---CCEEEEECSSCT-TCHHHHHHHHHHTT-TSEEEEEEESSCC
T ss_pred cCCCCeEEEEcCCCC-CCHHHHHHHHHHHh-cCCEEEEecCCCC
Confidence 344699999888776 55668899999987 8999999996654
No 78
>3qjg_A Epidermin biosynthesis protein EPID; structural genomics, center for structural genomics of infec diseases, csgid, oxidoreductase; HET: FMN; 2.04A {Staphylococcus aureus} SCOP: c.34.1.0
Probab=65.67 E-value=8.5 Score=32.06 Aligned_cols=43 Identities=5% Similarity=-0.026 Sum_probs=34.1
Q ss_pred CCEEEEEcCCCCCCHHHHHHHHHHHHhCCCeEEEEeCCccchhc
Q 011792 6 VPHVVLLPFPAYGHIKPMLSLAKLFSHAGFRITFVNTDQYHDRL 49 (477)
Q Consensus 6 ~~~il~~~~~~~GHv~p~l~La~~L~~rGH~Vt~~~~~~~~~~l 49 (477)
.+||++.-.|+.|=.. ...+.+.|+++|++|.++.++.-.+.+
T Consensus 5 ~k~IllgvTGs~aa~k-~~~ll~~L~~~g~~V~vv~T~~A~~fi 47 (175)
T 3qjg_A 5 GENVLICLCGSVNSIN-ISHYIIELKSKFDEVNVIASTNGRKFI 47 (175)
T ss_dssp CCEEEEEECSSGGGGG-HHHHHHHHTTTCSEEEEEECTGGGGGS
T ss_pred CCEEEEEEeCHHHHHH-HHHHHHHHHHCCCEEEEEECcCHHHHh
Confidence 3689888888865554 889999999999999999996544443
No 79
>3pdi_B Nitrogenase MOFE cofactor biosynthesis protein NI; nitrogenase cofactor maturation, NIFB, nifdk, NIFH; HET: CZL; 2.40A {Azotobacter vinelandii}
Probab=64.13 E-value=14 Score=36.08 Aligned_cols=87 Identities=13% Similarity=0.145 Sum_probs=54.7
Q ss_pred CCEEEEEcCCCCCCHHHHHHHHHHHHhCCCeEEEEeCCccchhccCCCcccccccCCCCeEEEeCCCCCCCCCCCCCCCh
Q 011792 6 VPHVVLLPFPAYGHIKPMLSLAKLFSHAGFRITFVNTDQYHDRLFGNTDVTAFYKHFPNFLCTSIPDGLPPDNPRFGIYT 85 (477)
Q Consensus 6 ~~~il~~~~~~~GHv~p~l~La~~L~~rGH~Vt~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 85 (477)
.+|++++. +-.-...|++-|.+-|-+|+.+.+....+...+ . +...
T Consensus 313 Gkrv~i~~-----~~~~~~~l~~~L~elGm~vv~~~~~~~~~~~~~-------------~---------~~~~------- 358 (458)
T 3pdi_B 313 SARTAIAA-----DPDLLLGFDALLRSMGAHTVAAVVPARAAALVD-------------S---------PLPS------- 358 (458)
T ss_dssp TCEEEEEC-----CHHHHHHHHHHHHTTTCEEEEEEESSCCSCCTT-------------T---------TSSC-------
T ss_pred CCEEEEEC-----CcHHHHHHHHHHHHCCCEEEEEEECCCChhhhh-------------C---------ccCc-------
Confidence 36788753 334567889999899999998887442111100 0 0000
Q ss_pred HHHHHhhchhcHHHHHHHHhcCCCCCeEEEECCCcchHHHHHHHcCCCeEEE
Q 011792 86 KDWFCSNKPVSKLAFRQLLMTPGRLPTCIISDSIMSFAIDVAEELNIPIITF 137 (477)
Q Consensus 86 ~~~~~~~~~~~~~~l~~~l~~~~~~~D~vI~D~~~~~~~~~A~~lgiP~v~~ 137 (477)
....-...+.+++++. +||++|.+. ....+|+++|||++.+
T Consensus 359 ------v~~~D~~~le~~i~~~--~pDllig~~---~~~~~a~k~gip~~~~ 399 (458)
T 3pdi_B 359 ------VRVGDLEDLEHAARAG--QAQLVIGNS---HALASARRLGVPLLRA 399 (458)
T ss_dssp ------EEESHHHHHHHHHHHH--TCSEEEECT---THHHHHHHTTCCEEEC
T ss_pred ------EEeCCHHHHHHHHHhc--CCCEEEECh---hHHHHHHHcCCCEEEe
Confidence 0000112456667665 899999987 3578999999999874
No 80
>2yxb_A Coenzyme B12-dependent mutase; alpha/beta, structural genomics, NPPSFA, national project on structural and functional analyses; 1.80A {Aeropyrum pernix}
Probab=63.86 E-value=5.1 Score=32.93 Aligned_cols=38 Identities=18% Similarity=0.301 Sum_probs=35.2
Q ss_pred CCEEEEEcCCCCCCHHHHHHHHHHHHhCCCeEEEEeCC
Q 011792 6 VPHVVLLPFPAYGHIKPMLSLAKLFSHAGFRITFVNTD 43 (477)
Q Consensus 6 ~~~il~~~~~~~GHv~p~l~La~~L~~rGH~Vt~~~~~ 43 (477)
+.+|++.+.++-.|-....-++..|...|++|.+....
T Consensus 18 ~~~vlla~~~gd~HdiG~~~va~~l~~~G~eVi~lG~~ 55 (161)
T 2yxb_A 18 RYKVLVAKMGLDGHDRGAKVVARALRDAGFEVVYTGLR 55 (161)
T ss_dssp SCEEEEEEESSSSCCHHHHHHHHHHHHTTCEEECCCSB
T ss_pred CCEEEEEeCCCCccHHHHHHHHHHHHHCCCEEEECCCC
Confidence 68999999999999999999999999999999998654
No 81
>2q5c_A NTRC family transcriptional regulator; structural genomics, protein structure initiative; HET: SO4 GOL; 1.49A {Clostridium acetobutylicum atcc 824}
Probab=63.74 E-value=25 Score=29.81 Aligned_cols=28 Identities=14% Similarity=-0.063 Sum_probs=24.5
Q ss_pred CCeEEEECCCcchHHHHHHHcCCCeEEEccC
Q 011792 110 LPTCIISDSIMSFAIDVAEELNIPIITFRPY 140 (477)
Q Consensus 110 ~~D~vI~D~~~~~~~~~A~~lgiP~v~~~~~ 140 (477)
++|+||.|. .+..+|+++|+|.+.+.+.
T Consensus 142 G~~vvVG~~---~~~~~A~~~Gl~~vli~sg 169 (196)
T 2q5c_A 142 NIKIVVSGK---TVTDEAIKQGLYGETINSG 169 (196)
T ss_dssp TCCEEEECH---HHHHHHHHTTCEEEECCCC
T ss_pred CCeEEECCH---HHHHHHHHcCCcEEEEecC
Confidence 999999987 5688999999999997664
No 82
>1mvl_A PPC decarboxylase athal3A; flavoprotein, active site mutant C175S; HET: FMN; 2.00A {Arabidopsis thaliana} SCOP: c.34.1.1 PDB: 1mvn_A* 1e20_A*
Probab=62.81 E-value=10 Score=32.58 Aligned_cols=42 Identities=24% Similarity=0.221 Sum_probs=34.9
Q ss_pred CCEEEEEcCCCCCCHHHHHHHHHHHHhCCCeEEEEeCCccchhc
Q 011792 6 VPHVVLLPFPAYGHIKPMLSLAKLFSHAGFRITFVNTDQYHDRL 49 (477)
Q Consensus 6 ~~~il~~~~~~~GHv~p~l~La~~L~~rGH~Vt~~~~~~~~~~l 49 (477)
++||++...|+.+-.. ...|.+.|.++| +|.++.++.-...+
T Consensus 19 ~k~IllgvTGsiaa~k-~~~ll~~L~~~g-~V~vv~T~~A~~fv 60 (209)
T 1mvl_A 19 KPRVLLAASGSVAAIK-FGNLCHCFTEWA-EVRAVVTKSSLHFL 60 (209)
T ss_dssp CCEEEEEECSSGGGGG-HHHHHHHHHTTS-EEEEEECTGGGGTC
T ss_pred CCEEEEEEeCcHHHHH-HHHHHHHHhcCC-CEEEEEcchHHHhc
Confidence 5789999999987666 899999999999 99999996654444
No 83
>1sbz_A Probable aromatic acid decarboxylase; FMN binding, PAD1, UBIX, montreal-kingston bacterial structu genomics initiative, BSGI; HET: FMN; 2.00A {Escherichia coli} SCOP: c.34.1.1
Probab=62.69 E-value=6.6 Score=33.45 Aligned_cols=43 Identities=9% Similarity=-0.001 Sum_probs=34.9
Q ss_pred CEEEEEcCCCCCCHHHHHHHHHHHHhC-CCeEEEEeCCccchhcc
Q 011792 7 PHVVLLPFPAYGHIKPMLSLAKLFSHA-GFRITFVNTDQYHDRLF 50 (477)
Q Consensus 7 ~~il~~~~~~~GHv~p~l~La~~L~~r-GH~Vt~~~~~~~~~~l~ 50 (477)
|||++.-.|+.|-.. ...|.+.|.++ |++|.++.++.-...+.
T Consensus 1 ~~IllgvTGsiaa~k-~~~ll~~L~~~~g~~V~vv~T~~A~~fi~ 44 (197)
T 1sbz_A 1 MKLIVGMTGATGAPL-GVALLQALREMPNVETHLVMSKWAKTTIE 44 (197)
T ss_dssp CEEEEEECSSSCHHH-HHHHHHHHHTCTTCEEEEEECHHHHHHHH
T ss_pred CEEEEEEeChHHHHH-HHHHHHHHHhccCCEEEEEECchHHHHhH
Confidence 578888888876665 89999999999 99999999966555544
No 84
>2vqe_B 30S ribosomal protein S2; tRNA-binding, rRNA-binding, metal-binding, zinc-finger, translation; HET: TM2 PAR; 2.5A {Thermus thermophilus} SCOP: c.23.15.1 PDB: 1gix_E* 1hnw_B* 1hnx_B* 1hnz_B* 1hr0_B 1ibk_B* 1ibl_B* 1ibm_B 1j5e_B 1jgo_E* 1jgp_E* 1jgq_E* 1ml5_E* 1n32_B* 1n33_B* 1n34_B 1n36_B 1xmo_B* 1xmq_B* 1xnq_B* ...
Probab=62.08 E-value=27 Score=30.98 Aligned_cols=36 Identities=28% Similarity=0.391 Sum_probs=26.0
Q ss_pred CCCCCeEEEECC-Ccc-hHHHHHHHcCCCeEEEccCch
Q 011792 107 PGRLPTCIISDS-IMS-FAIDVAEELNIPIITFRPYSA 142 (477)
Q Consensus 107 ~~~~~D~vI~D~-~~~-~~~~~A~~lgiP~v~~~~~~~ 142 (477)
....||+||+-. ..- -+..=|.++|||+|.+.-+.+
T Consensus 155 m~~~Pdll~V~Dp~~e~~Ai~EA~~l~IPvIaivDTn~ 192 (256)
T 2vqe_B 155 LKRLPDAIFVVDPTKEAIAVREARKLFIPVIALADTDS 192 (256)
T ss_dssp CSSCCSEEEESCTTTTHHHHHHHHHTTCCCEECCCTTS
T ss_pred cccCCCEEEEeCCccchHHHHHHHHcCCCEEEEecCCC
Confidence 344899888644 332 678889999999999865544
No 85
>3lqk_A Dipicolinate synthase subunit B; flavoprotein, PSI2, MCSG, structural protein structure initiative, midwest center for structural genomics; 2.10A {Bacillus halodurans}
Probab=61.96 E-value=12 Score=32.05 Aligned_cols=39 Identities=15% Similarity=0.005 Sum_probs=32.6
Q ss_pred CCEEEEEcCCCCCCHH-HHHHHHHHHHhCCCeEEEEeCCcc
Q 011792 6 VPHVVLLPFPAYGHIK-PMLSLAKLFSHAGFRITFVNTDQY 45 (477)
Q Consensus 6 ~~~il~~~~~~~GHv~-p~l~La~~L~~rGH~Vt~~~~~~~ 45 (477)
.+||++.-.|+ +... =...|.+.|+++|++|.++.++.-
T Consensus 7 ~k~I~lgiTGs-~aa~~k~~~ll~~L~~~g~eV~vv~T~~A 46 (201)
T 3lqk_A 7 GKHVGFGLTGS-HCTYHEVLPQMERLVELGAKVTPFVTHTV 46 (201)
T ss_dssp TCEEEEECCSC-GGGGGGTHHHHHHHHHTTCEEEEECSSCS
T ss_pred CCEEEEEEECh-HHHHHHHHHHHHHHhhCCCEEEEEEChhH
Confidence 57888888887 5555 789999999999999999998554
No 86
>2q5c_A NTRC family transcriptional regulator; structural genomics, protein structure initiative; HET: SO4 GOL; 1.49A {Clostridium acetobutylicum atcc 824}
Probab=60.30 E-value=34 Score=28.91 Aligned_cols=37 Identities=5% Similarity=0.169 Sum_probs=27.4
Q ss_pred ccccccccccCchhHHHHhhcCCceecCCccchhhhhH
Q 011792 364 QAIGGFLTHSGWNSTLESMVAGVPMICWPQVGDQQVNS 401 (477)
Q Consensus 364 ~~~~~~I~HGG~gs~~eal~~GvP~l~~P~~~DQ~~na 401 (477)
..++++|+.||.+...... .++|+|-++..+--...|
T Consensus 50 ~~~dVIISRGgta~~lr~~-~~iPVV~I~~s~~Dil~a 86 (196)
T 2q5c_A 50 DEVDAIISRGATSDYIKKS-VSIPSISIKVTRFDTMRA 86 (196)
T ss_dssp TTCSEEEEEHHHHHHHHTT-CSSCEEEECCCHHHHHHH
T ss_pred CCCeEEEECChHHHHHHHh-CCCCEEEEcCCHhHHHHH
Confidence 4445599999999998875 689999999855333333
No 87
>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}
Probab=59.97 E-value=6.8 Score=35.57 Aligned_cols=32 Identities=25% Similarity=0.389 Sum_probs=23.7
Q ss_pred CEEEEEcCCCCCCHHHHHHHHHHHHhCCCeEEEEeC
Q 011792 7 PHVVLLPFPAYGHIKPMLSLAKLFSHAGFRITFVNT 42 (477)
Q Consensus 7 ~~il~~~~~~~GHv~p~l~La~~L~~rGH~Vt~~~~ 42 (477)
|||++. |+.|-+- ..|++.|.++||+|+.++-
T Consensus 1 MkILVT--GatGfIG--~~L~~~L~~~G~~V~~l~R 32 (298)
T 4b4o_A 1 MRVLVG--GGTGFIG--TALTQLLNARGHEVTLVSR 32 (298)
T ss_dssp CEEEEE--TTTSHHH--HHHHHHHHHTTCEEEEEES
T ss_pred CEEEEE--CCCCHHH--HHHHHHHHHCCCEEEEEEC
Confidence 676654 4445554 4688999999999999874
No 88
>3u7q_B Nitrogenase molybdenum-iron protein beta chain; multiple rossmann fold domains, reductase, nitrogen fixing, oxidoreductase; HET: HCA ICS 1CL CLF; 1.00A {Azotobacter vinelandii} SCOP: c.92.2.3 PDB: 1fp4_B* 1g21_B* 1g20_B* 1m1n_B* 1l5h_B* 1m1y_B* 1m34_B* 1n2c_B* 2afh_B* 2afi_B* 2afk_B* 2min_B* 3k1a_B* 3min_B*
Probab=58.52 E-value=57 Score=32.40 Aligned_cols=99 Identities=18% Similarity=0.230 Sum_probs=54.2
Q ss_pred CCEEEEEcCCCCCCHHHHHHHHHHHHhCCCeEEEEeCCccchhccCCCcccccccCCCCeEEEeCCCCCCCCCCCCCCCh
Q 011792 6 VPHVVLLPFPAYGHIKPMLSLAKLFSHAGFRITFVNTDQYHDRLFGNTDVTAFYKHFPNFLCTSIPDGLPPDNPRFGIYT 85 (477)
Q Consensus 6 ~~~il~~~~~~~GHv~p~l~La~~L~~rGH~Vt~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 85 (477)
.+|++++ |+-.-...|++.|.+-|-+|+.+......+...+... .. +. .+|.+..
T Consensus 364 GKrvaI~-----gd~~~~~~la~fL~elGm~vv~v~~~~~~~~~~~~~~--~~------l~--~~~~~~~---------- 418 (523)
T 3u7q_B 364 GKRFALW-----GDPDFVMGLVKFLLELGCEPVHILCHNGNKRWKKAVD--AI------LA--ASPYGKN---------- 418 (523)
T ss_dssp TCEEEEE-----CSHHHHHHHHHHHHHTTCEEEEEEETTCCHHHHHHHH--HH------HH--TSGGGTT----------
T ss_pred CCEEEEE-----CCchHHHHHHHHHHHcCCEEEEEEeCCCCHHHHHHHH--HH------Hh--hccCCCC----------
Confidence 3678877 3444567888889999999988876432211110000 00 00 0000000
Q ss_pred HHHHHhhchhcHHHHHHHHhcCCCCCeEEEECCCcchHHHHHHHc-------CCCeEEE
Q 011792 86 KDWFCSNKPVSKLAFRQLLMTPGRLPTCIISDSIMSFAIDVAEEL-------NIPIITF 137 (477)
Q Consensus 86 ~~~~~~~~~~~~~~l~~~l~~~~~~~D~vI~D~~~~~~~~~A~~l-------giP~v~~ 137 (477)
...+.......+.+++++. +||+||.... ...+|+.+ |||++.+
T Consensus 419 ---~~v~~~~D~~~l~~~i~~~--~pDLlig~s~---~k~~a~~~~~~~~~~giP~iri 469 (523)
T 3u7q_B 419 ---ATVYIGKDLWHLRSLVFTD--KPDFMIGNSY---GKFIQRDTLHKGKEFEVPLIRI 469 (523)
T ss_dssp ---CEEEESCCHHHHHHHHHHT--CCSEEEECTT---HHHHHHHHHHHCGGGCCCEEEC
T ss_pred ---cEEEECCCHHHHHHHHHhc--CCCEEEECcc---HHHHHHHhhcccccCCCceEEe
Confidence 0001111344566777765 8999999974 34566666 9999884
No 89
>2i2x_B MTAC, methyltransferase 1; TIM barrel and helix bundle (MTAB), rossman fold and helix B (MTAC); HET: B13; 2.50A {Methanosarcina barkeri}
Probab=58.36 E-value=15 Score=32.82 Aligned_cols=38 Identities=16% Similarity=0.054 Sum_probs=35.2
Q ss_pred CCEEEEEcCCCCCCHHHHHHHHHHHHhCCCeEEEEeCC
Q 011792 6 VPHVVLLPFPAYGHIKPMLSLAKLFSHAGFRITFVNTD 43 (477)
Q Consensus 6 ~~~il~~~~~~~GHv~p~l~La~~L~~rGH~Vt~~~~~ 43 (477)
+.+|++.+.++-.|-....-++..|..+|++|.++...
T Consensus 123 ~~~vlla~~~gd~HdiG~~iva~~L~~~G~~Vi~LG~~ 160 (258)
T 2i2x_B 123 KGTVVCHVAEGDVHDIGKNIVTALLRANGYNVVDLGRD 160 (258)
T ss_dssp SCEEEEEECTTCCCCHHHHHHHHHHHHTTCEEEEEEEE
T ss_pred CCeEEEEeCCCCccHHHHHHHHHHHHHCCCEEEECCCC
Confidence 57999999999999999999999999999999988753
No 90
>2bw0_A 10-FTHFDH, 10-formyltetrahydrofolate dehydrogenase; nucleotide biosynthesis, oxidoreductase; 1.7A {Homo sapiens} SCOP: b.46.1.1 c.65.1.1 PDB: 2cfi_A* 1s3i_A
Probab=58.26 E-value=39 Score=31.28 Aligned_cols=105 Identities=9% Similarity=-0.059 Sum_probs=55.0
Q ss_pred CCEEEEEcCCCCCCHHHHHHHHHHHHhCCCeEEEEeCCccch----hccCCCcccccccCCCCeEEEeCCCCCCCCCCCC
Q 011792 6 VPHVVLLPFPAYGHIKPMLSLAKLFSHAGFRITFVNTDQYHD----RLFGNTDVTAFYKHFPNFLCTSIPDGLPPDNPRF 81 (477)
Q Consensus 6 ~~~il~~~~~~~GHv~p~l~La~~L~~rGH~Vt~~~~~~~~~----~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 81 (477)
+|||+|+ |--+....+.++|.++||+|..+.+..... .+.+.. ..-++.+...+. +..
T Consensus 22 ~mrIvf~-----G~~~fa~~~L~~L~~~~~~i~~Vvt~pd~~~~~~~v~~~A-------~~~gIpv~~~~~-~~~----- 83 (329)
T 2bw0_A 22 SMKIAVI-----GQSLFGQEVYCHLRKEGHEVVGVFTVPDKDGKADPLGLEA-------EKDGVPVFKYSR-WRA----- 83 (329)
T ss_dssp CCEEEEE-----CCHHHHHHHHHHHHHTTCEEEEEEECCCCSSCCCHHHHHH-------HHHTCCEEECSC-CEE-----
T ss_pred CCEEEEE-----cCcHHHHHHHHHHHHCCCeEEEEEeCCCcCCCCCHHHHHH-------HHcCCCEEecCc-ccc-----
Confidence 5899999 222444457789999999998776522110 000000 000133333220 000
Q ss_pred CCChHHHHHhhchhcHHHHHHHHhcCCCCCeEEEECCCcc-hHHHHHHHcCCCeEEEccCc
Q 011792 82 GIYTKDWFCSNKPVSKLAFRQLLMTPGRLPTCIISDSIMS-FAIDVAEELNIPIITFRPYS 141 (477)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~D~vI~D~~~~-~~~~~A~~lgiP~v~~~~~~ 141 (477)
.....+.+.+.+++. ++|++|+=.+.. -...+-+.....++-++++.
T Consensus 84 -----------~~~~~~~~~~~l~~~--~~Dliv~a~y~~ilp~~il~~~~~g~iNiHpSL 131 (329)
T 2bw0_A 84 -----------KGQALPDVVAKYQAL--GAELNVLPFCSQFIPMEIISAPRHGSIIYHPSL 131 (329)
T ss_dssp -----------TTEECHHHHHHHHTT--CCSEEEESSCSSCCCHHHHTCSTTCEEEEESSC
T ss_pred -----------cccccHHHHHHHHhc--CCCEEEEeehhhhCCHHHHhhCcCCEEEEcCCc
Confidence 011224555666665 899999877643 33344445556677776654
No 91
>1qkk_A DCTD, C4-dicarboxylate transport transcriptional regulatory protein; receiver domain, 2-component signal transduction; 1.7A {Sinorhizobium meliloti} SCOP: c.23.1.1 PDB: 1l5z_A 1l5y_A
Probab=58.02 E-value=41 Score=26.38 Aligned_cols=60 Identities=10% Similarity=0.126 Sum_probs=39.1
Q ss_pred cCCceecCCccchhhhhHHHHhhhhceeeeccCCCCHHHHHHHHHHHHhHhHHHHHHHHHHHHH
Q 011792 384 AGVPMICWPQVGDQQVNSRCVSEIWKIGFDMKDTCDRSTIEKLVRDLMDNKRDKIMESTVQIAK 447 (477)
Q Consensus 384 ~GvP~l~~P~~~DQ~~na~rv~~~~G~G~~l~~~~~~~~l~~~v~~ll~~~~~~~~~~a~~l~~ 447 (477)
..+|+|++--..+.......+ + .|+--.+.+.++.++|..+|+.++.. ..++...+++.+
T Consensus 74 ~~~pii~ls~~~~~~~~~~~~-~-~g~~~~l~kP~~~~~L~~~i~~~~~~--~~~~~~~~~~~~ 133 (155)
T 1qkk_A 74 PDLPMILVTGHGDIPMAVQAI-Q-DGAYDFIAKPFAADRLVQSARRAEEK--RRLVMENRSLRR 133 (155)
T ss_dssp TTSCEEEEECGGGHHHHHHHH-H-TTCCEEEESSCCHHHHHHHHHHHHHH--HHHHHHHHHHHH
T ss_pred CCCCEEEEECCCChHHHHHHH-h-cCCCeEEeCCCCHHHHHHHHHHHHHH--HHHHHHHHHHHH
Confidence 478888876555433333333 4 67766666889999999999999985 444443334333
No 92
>3zqu_A Probable aromatic acid decarboxylase; lyase; HET: FNR; 1.50A {Pseudomonas aeruginosa} SCOP: c.34.1.0
Probab=57.81 E-value=11 Score=32.39 Aligned_cols=43 Identities=14% Similarity=0.060 Sum_probs=35.6
Q ss_pred CCEEEEEcCCCCCCHHHHHHHHHHHHhCCCeEEEEeCCccchhc
Q 011792 6 VPHVVLLPFPAYGHIKPMLSLAKLFSHAGFRITFVNTDQYHDRL 49 (477)
Q Consensus 6 ~~~il~~~~~~~GHv~p~l~La~~L~~rGH~Vt~~~~~~~~~~l 49 (477)
++||++.-.|+.|-.. ...|.+.|.++|++|.++.++.-...+
T Consensus 4 ~k~IllgvTGaiaa~k-~~~ll~~L~~~g~eV~vv~T~~A~~fi 46 (209)
T 3zqu_A 4 PERITLAMTGASGAQY-GLRLLDCLVQEEREVHFLISKAAQLVM 46 (209)
T ss_dssp CSEEEEEECSSSCHHH-HHHHHHHHHHTTCEEEEEECHHHHHHH
T ss_pred CCEEEEEEECHHHHHH-HHHHHHHHHHCCCEEEEEECccHHHHH
Confidence 4789988888877766 889999999999999999996544444
No 93
>1y80_A Predicted cobalamin binding protein; corrinoid, factor IIIM, methyl transferase, structural genomics, PSI, protein structure initiative; HET: B1M; 1.70A {Moorella thermoacetica}
Probab=57.72 E-value=10 Score=32.61 Aligned_cols=44 Identities=18% Similarity=0.146 Sum_probs=37.6
Q ss_pred CCEEEEEcCCCCCCHHHHHHHHHHHHhCCCeEEEEeCCccchhc
Q 011792 6 VPHVVLLPFPAYGHIKPMLSLAKLFSHAGFRITFVNTDQYHDRL 49 (477)
Q Consensus 6 ~~~il~~~~~~~GHv~p~l~La~~L~~rGH~Vt~~~~~~~~~~l 49 (477)
+.+|++.+.++-.|-....-++..|..+|++|.++....-.+.+
T Consensus 88 ~~~vll~~~~gd~H~iG~~~va~~l~~~G~~v~~LG~~vp~~~l 131 (210)
T 1y80_A 88 VGKIVLGTVKGDLHDIGKNLVAMMLESGGFTVYNLGVDIEPGKF 131 (210)
T ss_dssp CCEEEEEEBTTCCCCHHHHHHHHHHHHTTCEEEECCSSBCHHHH
T ss_pred CCEEEEEeCCCcccHHHHHHHHHHHHHCCCEEEECCCCCCHHHH
Confidence 46899999999999999999999999999999998765333333
No 94
>1xmp_A PURE, phosphoribosylaminoimidazole carboxylase; purine biosynthesis, spine, lyase; 1.80A {Bacillus anthracis} SCOP: c.23.8.1
Probab=55.92 E-value=83 Score=25.74 Aligned_cols=141 Identities=13% Similarity=0.106 Sum_probs=80.8
Q ss_pred CCcEEEEEecCcccCCHHHHHHHHHHHHhCCCcEEEEEecCCcCCCCCCCCCchhhHhhhcCCCceeeccCHHHHHhc--
Q 011792 286 SRSVLYVSFGSFIKLSGDQILEFWHGIVNSGKGFLWVIRSDLIDGESGVGPVPAELDQGTKERGCIVSWAPQEEVLAH-- 363 (477)
Q Consensus 286 ~~~~v~vs~Gs~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~~p~~~ll~~-- 363 (477)
-+|.|-|-+||.. +....+.....++.++..+-+.+.+ .+..|+.+. .+...
T Consensus 10 ~~~~V~IimGS~S--D~~v~~~a~~~L~~~Gi~~dv~V~S--------aHR~p~~l~----------------~~~~~a~ 63 (170)
T 1xmp_A 10 MKSLVGVIMGSTS--DWETMKYACDILDELNIPYEKKVVS--------AHRTPDYMF----------------EYAETAR 63 (170)
T ss_dssp -CCSEEEEESSGG--GHHHHHHHHHHHHHTTCCEEEEECC--------TTTSHHHHH----------------HHHHHTT
T ss_pred CCCcEEEEECcHH--HHHHHHHHHHHHHHcCCCEEEEEEe--------ccCCHHHHH----------------HHHHHHH
Confidence 3566888888874 6777888889999999887666632 234444332 12221
Q ss_pred -ccccccccccCch----hHHHHhhcCCceecCCccch--hhhhH--HHHhhhhceeee---cc--CCCCHHHHHHHHHH
Q 011792 364 -QAIGGFLTHSGWN----STLESMVAGVPMICWPQVGD--QQVNS--RCVSEIWKIGFD---MK--DTCDRSTIEKLVRD 429 (477)
Q Consensus 364 -~~~~~~I~HGG~g----s~~eal~~GvP~l~~P~~~D--Q~~na--~rv~~~~G~G~~---l~--~~~~~~~l~~~v~~ 429 (477)
..++++|.=.|.. ++..++ .-+|+|.+|.... .-..+ ..+.---|+.+. ++ +..++.-++..|..
T Consensus 64 ~~g~~ViIa~AG~aa~LpgvvA~~-t~~PVIgVP~~~~~l~G~daLlSivqmP~GvpVatV~I~~a~~~nAallAaqIla 142 (170)
T 1xmp_A 64 ERGLKVIIAGAGGAAHLPGMVAAK-TNLPVIGVPVQSKALNGLDSLLSIVQMPGGVPVATVAIGKAGSTNAGLLAAQILG 142 (170)
T ss_dssp TTTCCEEEEEEESSCCHHHHHHTT-CCSCEEEEEECCTTTTTHHHHHHHHCCCTTCCCEECCSSHHHHHHHHHHHHHHHH
T ss_pred hCCCcEEEEECCchhhhHHHHHhc-cCCCEEEeeCCCCCCCcHHHHHHHhcCCCCCeeEEEecCCcchHHHHHHHHHHHc
Confidence 1134488777754 333333 4689999998542 11111 112101255432 22 23455555555543
Q ss_pred HHhHhHHHHHHHHHHHHHHHHHHHHcC
Q 011792 430 LMDNKRDKIMESTVQIAKMARDAVKEG 456 (477)
Q Consensus 430 ll~~~~~~~~~~a~~l~~~~~~~~~~g 456 (477)
+.| +.++++.+.+++.+++.+.+.
T Consensus 143 -~~d--~~l~~kl~~~r~~~~~~v~~~ 166 (170)
T 1xmp_A 143 -SFH--DDIHDALELRREAIEKDVREG 166 (170)
T ss_dssp -TTC--HHHHHHHHHHHHHHHHHHHC-
T ss_pred -cCC--HHHHHHHHHHHHHHHHHHHhc
Confidence 235 899999999999888765543
No 95
>1qgu_B Protein (nitrogenase molybdenum iron protein); biological nitrogen fixation, nitrogen metabolism, molybdoenzymes, electron transfer; HET: HCA CFM CLF; 1.60A {Klebsiella pneumoniae} SCOP: c.92.2.3 PDB: 1h1l_B* 1qh1_B* 1qh8_B*
Probab=54.85 E-value=45 Score=33.12 Aligned_cols=90 Identities=16% Similarity=0.213 Sum_probs=54.8
Q ss_pred CCEEEEEcCCCCCCHHHHHHHHHHHHhCCCeEEEEeCCccchhccCCCcccccccCCCCeEEEeCCCCCCCCCCCCCCCh
Q 011792 6 VPHVVLLPFPAYGHIKPMLSLAKLFSHAGFRITFVNTDQYHDRLFGNTDVTAFYKHFPNFLCTSIPDGLPPDNPRFGIYT 85 (477)
Q Consensus 6 ~~~il~~~~~~~GHv~p~l~La~~L~~rGH~Vt~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 85 (477)
.+|++++. +-.-.+.|++.|.+-|-+|+.+......+...+ .+
T Consensus 360 Gkrv~i~g-----d~~~~~~la~~L~ElGm~vv~v~~~~~~~~~~~--------------------------------~~ 402 (519)
T 1qgu_B 360 GKKFGLYG-----DPDFVMGLTRFLLELGCEPTVILSHNANKRWQK--------------------------------AM 402 (519)
T ss_dssp TCEEEEES-----CHHHHHHHHHHHHHTTCEEEEEEETTCCHHHHH--------------------------------HH
T ss_pred CCEEEEEC-----CchHHHHHHHHHHHCCCEEEEEEeCCCCHHHHH--------------------------------HH
Confidence 36788773 444567888999999999987766332211100 00
Q ss_pred HHHHHh---------hchhcHHHHHHHHhcCCCCCeEEEECCCcchHHHHHHHc-------CCCeEEE
Q 011792 86 KDWFCS---------NKPVSKLAFRQLLMTPGRLPTCIISDSIMSFAIDVAEEL-------NIPIITF 137 (477)
Q Consensus 86 ~~~~~~---------~~~~~~~~l~~~l~~~~~~~D~vI~D~~~~~~~~~A~~l-------giP~v~~ 137 (477)
..+++. +.......+.+++++. +||++|.+.. +..+|+++ |||++.+
T Consensus 403 ~~ll~~~~~~~~~~v~~~~d~~~l~~~i~~~--~pDLiig~~~---~~~~a~~~~~~g~~~gip~v~i 465 (519)
T 1qgu_B 403 NKMLDASPYGRDSEVFINCDLWHFRSLMFTR--QPDFMIGNSY---GKFIQRDTLAKGKAFEVPLIRL 465 (519)
T ss_dssp HHHHHHSTTCTTCEEEESCCHHHHHHHHHHH--CCSEEEECGG---GHHHHHHHHHHCGGGCCCEEEC
T ss_pred HHHHHhcCCCCCCEEEECCCHHHHHHHHhhc--CCCEEEECcc---hHHHHHHhhcccccCCCCeEEe
Confidence 011110 1111334556666655 8999999873 47788888 9999874
No 96
>4dim_A Phosphoribosylglycinamide synthetase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, ligase; 2.61A {Anaerococcus prevotii}
Probab=54.00 E-value=33 Score=32.57 Aligned_cols=33 Identities=15% Similarity=0.032 Sum_probs=26.5
Q ss_pred CCEEEEEcCCCCCCHHHHHHHHHHHHhCCCeEEEEeCC
Q 011792 6 VPHVVLLPFPAYGHIKPMLSLAKLFSHAGFRITFVNTD 43 (477)
Q Consensus 6 ~~~il~~~~~~~GHv~p~l~La~~L~~rGH~Vt~~~~~ 43 (477)
.++|+++..+.. -+.+++++.+.|++|+++..+
T Consensus 7 ~~~ilI~g~g~~-----~~~~~~a~~~~G~~~v~v~~~ 39 (403)
T 4dim_A 7 NKRLLILGAGRG-----QLGLYKAAKELGIHTIAGTMP 39 (403)
T ss_dssp CCEEEEECCCGG-----GHHHHHHHHHHTCEEEEEECS
T ss_pred CCEEEEECCcHh-----HHHHHHHHHHCCCEEEEEcCC
Confidence 478999877753 366999999999999999753
No 97
>3euw_A MYO-inositol dehydrogenase; protein structure initiative II (PSI II), NYSGXRC, MYO-inosi dehydrogenase, oxidoreductase, tetramer; 2.30A {Corynebacterium glutamicum}
Probab=53.44 E-value=75 Score=29.28 Aligned_cols=109 Identities=14% Similarity=0.064 Sum_probs=58.4
Q ss_pred cEEEEEecCcccCCHHHHHHHHHHHHhC-CCcEEEEEecCCcCCCCCCCCCchhhHhhhcCCCceeeccCHHHHHhcccc
Q 011792 288 SVLYVSFGSFIKLSGDQILEFWHGIVNS-GKGFLWVIRSDLIDGESGVGPVPAELDQGTKERGCIVSWAPQEEVLAHQAI 366 (477)
Q Consensus 288 ~~v~vs~Gs~~~~~~~~~~~~~~a~~~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~~p~~~ll~~~~~ 366 (477)
.+.+|..|.+. ..++.++... +..++.+...+ +.. .+...+..-+..+-...+++..+++
T Consensus 6 rvgiiG~G~~g-------~~~~~~l~~~~~~~l~av~d~~-----------~~~-~~~~a~~~g~~~~~~~~~~l~~~~~ 66 (344)
T 3euw_A 6 RIALFGAGRIG-------HVHAANIAANPDLELVVIADPF-----------IEG-AQRLAEANGAEAVASPDEVFARDDI 66 (344)
T ss_dssp EEEEECCSHHH-------HHHHHHHHHCTTEEEEEEECSS-----------HHH-HHHHHHTTTCEEESSHHHHTTCSCC
T ss_pred EEEEECCcHHH-------HHHHHHHHhCCCcEEEEEECCC-----------HHH-HHHHHHHcCCceeCCHHHHhcCCCC
Confidence 36677888765 3455666665 44555455211 111 1111111113345567888886566
Q ss_pred cccccccCch----hHHHHhhcCCceec-CCccc--hhhhhHHHHhhhhceeeecc
Q 011792 367 GGFLTHSGWN----STLESMVAGVPMIC-WPQVG--DQQVNSRCVSEIWKIGFDMK 415 (477)
Q Consensus 367 ~~~I~HGG~g----s~~eal~~GvP~l~-~P~~~--DQ~~na~rv~~~~G~G~~l~ 415 (477)
++++----.. -+.+++.+|+++++ -|+.. ++-.-...++++.|+-+...
T Consensus 67 D~V~i~tp~~~h~~~~~~al~~gk~v~~EKP~~~~~~~~~~l~~~a~~~g~~~~v~ 122 (344)
T 3euw_A 67 DGIVIGSPTSTHVDLITRAVERGIPALCEKPIDLDIEMVRACKEKIGDGASKVMLG 122 (344)
T ss_dssp CEEEECSCGGGHHHHHHHHHHTTCCEEECSCSCSCHHHHHHHHHHHGGGGGGEEEC
T ss_pred CEEEEeCCchhhHHHHHHHHHcCCcEEEECCCCCCHHHHHHHHHHHHhcCCeEEec
Confidence 5576544433 46788999999887 36543 33333333345556655554
No 98
>3pdi_A Nitrogenase MOFE cofactor biosynthesis protein NI; nitrogenase cofactor maturation, NIFB, nifdk, NIFH; HET: CZL; 2.40A {Azotobacter vinelandii}
Probab=53.34 E-value=36 Score=33.41 Aligned_cols=37 Identities=8% Similarity=0.073 Sum_probs=28.2
Q ss_pred HHHHHHHHhcCCCCCeEEEECCCcchHHHHHHHcCCCeEEEc
Q 011792 97 KLAFRQLLMTPGRLPTCIISDSIMSFAIDVAEELNIPIITFR 138 (477)
Q Consensus 97 ~~~l~~~l~~~~~~~D~vI~D~~~~~~~~~A~~lgiP~v~~~ 138 (477)
...+.+++++. +||++|... ....+|+++|||++.+.
T Consensus 390 ~~el~~~i~~~--~pDL~ig~~---~~~~~a~k~gIP~~~~~ 426 (483)
T 3pdi_A 390 ARVLLKTVDEY--QADILIAGG---RNMYTALKGRVPFLDIN 426 (483)
T ss_dssp HHHHHHHHHHT--TCSEEECCG---GGHHHHHHTTCCBCCCC
T ss_pred HHHHHHHHHhc--CCCEEEECC---chhHHHHHcCCCEEEec
Confidence 34566666665 999999976 45678999999998653
No 99
>2r8r_A Sensor protein; KDPD, PFAM02702, MCSG, structural genomics, protein structure initiative, midwest center for structural genomics, kinase; 2.30A {Pseudomonas syringae PV}
Probab=53.32 E-value=17 Score=31.60 Aligned_cols=39 Identities=23% Similarity=0.197 Sum_probs=35.4
Q ss_pred CCEEEEEcCCCCCCHHHHHHHHHHHHhCCCeEEEEeCCc
Q 011792 6 VPHVVLLPFPAYGHIKPMLSLAKLFSHAGFRITFVNTDQ 44 (477)
Q Consensus 6 ~~~il~~~~~~~GHv~p~l~La~~L~~rGH~Vt~~~~~~ 44 (477)
+++|++..-||-|-..-++.+|..|+++|++|.++..+.
T Consensus 6 ~l~I~~~~kgGvGKTt~a~~la~~l~~~G~~V~v~d~D~ 44 (228)
T 2r8r_A 6 RLKVFLGAAPGVGKTYAMLQAAHAQLRQGVRVMAGVVET 44 (228)
T ss_dssp CEEEEEESSTTSSHHHHHHHHHHHHHHTTCCEEEEECCC
T ss_pred eEEEEEECCCCCcHHHHHHHHHHHHHHCCCCEEEEEeCC
Confidence 688899999999999999999999999999998887744
No 100
>3mc3_A DSRE/DSRF-like family protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MLY MSE; 1.49A {Sulfolobus solfataricus}
Probab=53.31 E-value=24 Score=27.74 Aligned_cols=39 Identities=5% Similarity=0.056 Sum_probs=29.0
Q ss_pred CCEEEEEcCCC---CCCHHHHHHHHHHHHhCCCeEEEEeCCc
Q 011792 6 VPHVVLLPFPA---YGHIKPMLSLAKLFSHAGFRITFVNTDQ 44 (477)
Q Consensus 6 ~~~il~~~~~~---~GHv~p~l~La~~L~~rGH~Vt~~~~~~ 44 (477)
.+|++|+...+ .......+.+|...+..||+|+++....
T Consensus 15 ~~kl~ii~~sgP~~~~~~~~al~lA~~A~a~g~eV~vFf~~d 56 (134)
T 3mc3_A 15 XXXILIVVTHGPEDLDRTYAPLFMASISASMEYETSVFFMIX 56 (134)
T ss_dssp CCEEEEEECCCGGGTHHHHHHHHHHHHHHHTTCEEEEEECTT
T ss_pred cceEEEEEccCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEeC
Confidence 45676665543 4556678888999999999999988754
No 101
>1psw_A ADP-heptose LPS heptosyltransferase II; structural genomics, NYSGXRC, LPS biosynthetic pathway, PSI, protein structure initiative; 2.00A {Escherichia coli} SCOP: c.87.1.7
Probab=52.82 E-value=77 Score=29.02 Aligned_cols=100 Identities=17% Similarity=0.247 Sum_probs=56.8
Q ss_pred CEEEEEcCCCCC---CH--HHHHHHHHHHHhCCCeEEEEeCCccchhccCCCcccccccCCCC---eEEEeCCCCCCCCC
Q 011792 7 PHVVLLPFPAYG---HI--KPMLSLAKLFSHAGFRITFVNTDQYHDRLFGNTDVTAFYKHFPN---FLCTSIPDGLPPDN 78 (477)
Q Consensus 7 ~~il~~~~~~~G---Hv--~p~l~La~~L~~rGH~Vt~~~~~~~~~~l~~~~~~~~~~~~~~~---~~~~~l~~~~~~~~ 78 (477)
..|++.|....+ .| .-+..|++.|.++|.+|.++.++...+...+.. ...+. .....+.
T Consensus 181 ~~i~l~pga~~~~~k~wp~~~~~~l~~~L~~~~~~vvl~g~~~e~~~~~~i~------~~~~~~~~~~~~~l~------- 247 (348)
T 1psw_A 181 PMIGFCPGAEFGPAKRWPHYHYAELAKQLIDEGYQVVLFGSAKDHEAGNEIL------AALNTEQQAWCRNLA------- 247 (348)
T ss_dssp CEEEEECCCTTCGGGSCCHHHHHHHHHHHHHTTCEEEECCCGGGHHHHHHHH------TTSCHHHHTTEEECT-------
T ss_pred cEEEEECCCCccccCCCCHHHHHHHHHHHHHCCCeEEEEeChhhHHHHHHHH------HhhhhccccceEecc-------
Confidence 346666654222 23 368899999999999998876543222111100 00000 0000000
Q ss_pred CCCCCChHHHHHhhchhcHHHHHHHHhcCCCCCeEEEECCCcchHHHHHHHcCCCeEEEcc
Q 011792 79 PRFGIYTKDWFCSNKPVSKLAFRQLLMTPGRLPTCIISDSIMSFAIDVAEELNIPIITFRP 139 (477)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~D~vI~D~~~~~~~~~A~~lgiP~v~~~~ 139 (477)
-+.....+.++++ .-|++|+.- .+.+.+|..+|+|+|.++.
T Consensus 248 --------------g~~sl~e~~ali~----~a~l~I~~D--sg~~HlAaa~g~P~v~lfg 288 (348)
T 1psw_A 248 --------------GETQLDQAVILIA----ACKAIVTND--SGLMHVAAALNRPLVALYG 288 (348)
T ss_dssp --------------TTSCHHHHHHHHH----TSSEEEEES--SHHHHHHHHTTCCEEEEES
T ss_pred --------------CcCCHHHHHHHHH----hCCEEEecC--CHHHHHHHHcCCCEEEEEC
Confidence 0112345666776 678999864 4678889999999999754
No 102
>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}
Probab=51.84 E-value=8.5 Score=35.79 Aligned_cols=32 Identities=13% Similarity=0.225 Sum_probs=27.0
Q ss_pred CCEEEEEcCCCCCCHHHHHHHHHHHHhCCCeEEEEeC
Q 011792 6 VPHVVLLPFPAYGHIKPMLSLAKLFSHAGFRITFVNT 42 (477)
Q Consensus 6 ~~~il~~~~~~~GHv~p~l~La~~L~~rGH~Vt~~~~ 42 (477)
++||.|+-.|.-| ..+|..|.+.||+|+++..
T Consensus 14 ~~kI~iIG~G~mG-----~ala~~L~~~G~~V~~~~r 45 (335)
T 1z82_A 14 EMRFFVLGAGSWG-----TVFAQMLHENGEEVILWAR 45 (335)
T ss_dssp CCEEEEECCSHHH-----HHHHHHHHHTTCEEEEECS
T ss_pred CCcEEEECcCHHH-----HHHHHHHHhCCCeEEEEeC
Confidence 7999999776544 5789999999999999865
No 103
>1g63_A Epidermin modifying enzyme EPID; alpha, beta protein, rossmann like fold, oxidoreductase; HET: FMN; 2.50A {Staphylococcus epidermidis} SCOP: c.34.1.1 PDB: 1g5q_A*
Probab=50.85 E-value=15 Score=30.82 Aligned_cols=43 Identities=2% Similarity=-0.051 Sum_probs=33.5
Q ss_pred CEEEEEcCCCCCCHHHHHHHHHHHHhCCCeEEEEeCCccchhcc
Q 011792 7 PHVVLLPFPAYGHIKPMLSLAKLFSHAGFRITFVNTDQYHDRLF 50 (477)
Q Consensus 7 ~~il~~~~~~~GHv~p~l~La~~L~~rGH~Vt~~~~~~~~~~l~ 50 (477)
.||++.-.|+.+=. =...+.+.|.++|++|.++.++.-...+.
T Consensus 3 k~IllgvTGs~aa~-k~~~l~~~L~~~g~~V~vv~T~~A~~fi~ 45 (181)
T 1g63_A 3 GKLLICATASINVI-NINHYIVELKQHFDEVNILFSPSSKNFIN 45 (181)
T ss_dssp CCEEEEECSCGGGG-GHHHHHHHHTTTSSCEEEEECGGGGGTSC
T ss_pred CEEEEEEECHHHHH-HHHHHHHHHHHCCCEEEEEEchhHHHHHH
Confidence 47888888875544 67899999999999999999966544443
No 104
>3q2i_A Dehydrogenase; rossmann fold, UDP-sugar binding, NAD binding oxidoreductase; HET: NAD HP7; 1.50A {Chromobacterium violaceum} PDB: 3q2k_A*
Probab=49.86 E-value=74 Score=29.45 Aligned_cols=124 Identities=12% Similarity=0.096 Sum_probs=66.6
Q ss_pred cEEEEEecCcccCCHHHHHHHHHHHHhC--CCcEEEEEecCCcCCCCCCCCCchhhHhhhcCCCceeeccCHHHHHhccc
Q 011792 288 SVLYVSFGSFIKLSGDQILEFWHGIVNS--GKGFLWVIRSDLIDGESGVGPVPAELDQGTKERGCIVSWAPQEEVLAHQA 365 (477)
Q Consensus 288 ~~v~vs~Gs~~~~~~~~~~~~~~a~~~~--~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~~p~~~ll~~~~ 365 (477)
.+.+|..|.+. ..++.++.+. +..++.....+. .....+.++. ++ ..+-...++|..++
T Consensus 15 rvgiiG~G~~g-------~~~~~~l~~~~~~~~lvav~d~~~--------~~~~~~~~~~--~~--~~~~~~~~ll~~~~ 75 (354)
T 3q2i_A 15 RFALVGCGRIA-------NNHFGALEKHADRAELIDVCDIDP--------AALKAAVERT--GA--RGHASLTDMLAQTD 75 (354)
T ss_dssp EEEEECCSTTH-------HHHHHHHHHTTTTEEEEEEECSSH--------HHHHHHHHHH--CC--EEESCHHHHHHHCC
T ss_pred eEEEEcCcHHH-------HHHHHHHHhCCCCeEEEEEEcCCH--------HHHHHHHHHc--CC--ceeCCHHHHhcCCC
Confidence 57888888876 3455666665 445555552110 0001111111 22 44567788888666
Q ss_pred ccccccccCc----hhHHHHhhcCCceec-CCccc--hhhhhHHHHhhhhceeeecc--CCCCHHHHHHHHHHHHh
Q 011792 366 IGGFLTHSGW----NSTLESMVAGVPMIC-WPQVG--DQQVNSRCVSEIWKIGFDMK--DTCDRSTIEKLVRDLMD 432 (477)
Q Consensus 366 ~~~~I~HGG~----gs~~eal~~GvP~l~-~P~~~--DQ~~na~rv~~~~G~G~~l~--~~~~~~~l~~~v~~ll~ 432 (477)
+++++--.-. .-+.+++.+|+++++ -|+.. ++-.-...++++.|+-+.+. ..+.+ ....+++++.
T Consensus 76 ~D~V~i~tp~~~h~~~~~~al~~gk~v~~EKP~a~~~~~~~~l~~~a~~~g~~~~v~~~~r~~p--~~~~~k~~i~ 149 (354)
T 3q2i_A 76 ADIVILTTPSGLHPTQSIECSEAGFHVMTEKPMATRWEDGLEMVKAADKAKKHLFVVKQNRRNA--TLQLLKRAMQ 149 (354)
T ss_dssp CSEEEECSCGGGHHHHHHHHHHTTCEEEECSSSCSSHHHHHHHHHHHHHHTCCEEECCGGGGSH--HHHHHHHHHH
T ss_pred CCEEEECCCcHHHHHHHHHHHHCCCCEEEeCCCcCCHHHHHHHHHHHHHhCCeEEEEEcccCCH--HHHHHHHHHh
Confidence 6556643332 346778999999887 36544 33333333445556655554 24554 3345555554
No 105
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=49.71 E-value=8.2 Score=30.44 Aligned_cols=33 Identities=12% Similarity=0.149 Sum_probs=24.9
Q ss_pred CCEEEEEcCCCCCCHHHHHHHHHHHHhCCCeEEEEeCC
Q 011792 6 VPHVVLLPFPAYGHIKPMLSLAKLFSHAGFRITFVNTD 43 (477)
Q Consensus 6 ~~~il~~~~~~~GHv~p~l~La~~L~~rGH~Vt~~~~~ 43 (477)
.+||+++-. |.+ -..+++.|.++||+|+++...
T Consensus 6 ~~~v~I~G~---G~i--G~~la~~L~~~g~~V~~id~~ 38 (141)
T 3llv_A 6 RYEYIVIGS---EAA--GVGLVRELTAAGKKVLAVDKS 38 (141)
T ss_dssp CCSEEEECC---SHH--HHHHHHHHHHTTCCEEEEESC
T ss_pred CCEEEEECC---CHH--HHHHHHHHHHCCCeEEEEECC
Confidence 357777754 443 467899999999999998753
No 106
>3tov_A Glycosyl transferase family 9; structural genomics, PSI-BIOL protein structure initiative, midwest center for structural genomics, MCSG; 2.98A {Veillonella parvula}
Probab=49.65 E-value=45 Score=31.04 Aligned_cols=100 Identities=10% Similarity=0.057 Sum_probs=58.9
Q ss_pred CEEEEEcCCCCC--C--HHHHHHHHHHHHhCCCeEEEEeCCccchhccCCCcccccccCCCCeEEEeCCCCCCCCCCCCC
Q 011792 7 PHVVLLPFPAYG--H--IKPMLSLAKLFSHAGFRITFVNTDQYHDRLFGNTDVTAFYKHFPNFLCTSIPDGLPPDNPRFG 82 (477)
Q Consensus 7 ~~il~~~~~~~G--H--v~p~l~La~~L~~rGH~Vt~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 82 (477)
.-|++.|..+.. . ..-+..|++.|.++|++|.++..+...+...+... ..+ -....+
T Consensus 186 ~~i~i~pga~~~~k~wp~~~~~~l~~~l~~~g~~vvl~g~~~e~~~~~~i~~------~~~-~~~~~l------------ 246 (349)
T 3tov_A 186 ILIGFNIGSAVPEKRWPAERFAHVADYFGRLGYKTVFFGGPMDLEMVQPVVE------QME-TKPIVA------------ 246 (349)
T ss_dssp CEEEEECCCSSGGGCCCHHHHHHHHHHHHHHTCEEEECCCTTTHHHHHHHHH------TCS-SCCEEC------------
T ss_pred CEEEEeCCCCCccCCCCHHHHHHHHHHHHhCCCeEEEEeCcchHHHHHHHHH------hcc-cccEEe------------
Confidence 456666665432 2 23589999999999999998766443322211000 000 000000
Q ss_pred CChHHHHHhhchhcHHHHHHHHhcCCCCCeEEEECCCcchHHHHHHHcCCCeEEEccC
Q 011792 83 IYTKDWFCSNKPVSKLAFRQLLMTPGRLPTCIISDSIMSFAIDVAEELNIPIITFRPY 140 (477)
Q Consensus 83 ~~~~~~~~~~~~~~~~~l~~~l~~~~~~~D~vI~D~~~~~~~~~A~~lgiP~v~~~~~ 140 (477)
.-+....++.++++ +-|++|+.- .+.+.+|..+|+|+|.++..
T Consensus 247 ---------~g~~sl~e~~ali~----~a~~~i~~D--sG~~HlAaa~g~P~v~lfg~ 289 (349)
T 3tov_A 247 ---------TGKFQLGPLAAAMN----RCNLLITND--SGPMHVGISQGVPIVALYGP 289 (349)
T ss_dssp ---------TTCCCHHHHHHHHH----TCSEEEEES--SHHHHHHHTTTCCEEEECSS
T ss_pred ---------eCCCCHHHHHHHHH----hCCEEEECC--CCHHHHHHhcCCCEEEEECC
Confidence 00113345666776 678999863 36788899999999998653
No 107
>4b4k_A N5-carboxyaminoimidazole ribonucleotide mutase; isomerase; 2.50A {Bacillus anthracis}
Probab=49.63 E-value=1.1e+02 Score=25.27 Aligned_cols=142 Identities=12% Similarity=0.093 Sum_probs=79.0
Q ss_pred CcEEEEEecCcccCCHHHHHHHHHHHHhCCCcEEEEEecCCcCCCCCCCCCchhhHhhhcCCCceeeccCHHHHHhcccc
Q 011792 287 RSVLYVSFGSFIKLSGDQILEFWHGIVNSGKGFLWVIRSDLIDGESGVGPVPAELDQGTKERGCIVSWAPQEEVLAHQAI 366 (477)
Q Consensus 287 ~~~v~vs~Gs~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~~p~~~ll~~~~~ 366 (477)
+|.|-|-+||.. +....+...+.|+.++..+-..+.+ .+..|+.+.+-. .-.....+
T Consensus 22 kp~V~IimGS~S--D~~v~~~a~~~L~~~gI~~e~~V~S--------AHRtp~~l~~~~-------------~~a~~~g~ 78 (181)
T 4b4k_A 22 KSLVGVIMGSTS--DWETMKYACDILDELNIPYEKKVVS--------AHRTPDYMFEYA-------------ETARERGL 78 (181)
T ss_dssp CCSEEEEESSGG--GHHHHHHHHHHHHHTTCCEEEEECC--------TTTSHHHHHHHH-------------HHTTTTTC
T ss_pred CccEEEEECCHh--HHHHHHHHHHHHHHcCCCeeEEEEc--------cccChHHHHHHH-------------HHHHhcCc
Confidence 467888899885 6778889999999999887666632 234454332110 00111233
Q ss_pred cccccccCch----hHHHHhhcCCceecCCccch---hhhhHHHHhhhhceeeecc----C---CCCHHHHHHHHHHHHh
Q 011792 367 GGFLTHSGWN----STLESMVAGVPMICWPQVGD---QQVNSRCVSEIWKIGFDMK----D---TCDRSTIEKLVRDLMD 432 (477)
Q Consensus 367 ~~~I~HGG~g----s~~eal~~GvP~l~~P~~~D---Q~~na~rv~~~~G~G~~l~----~---~~~~~~l~~~v~~ll~ 432 (477)
+++|.=.|.. ++..+ ..-+|+|.+|.... -.+.-.-+++ +--|+-+- + ..++.-++..|..+ .
T Consensus 79 ~ViIa~AG~aahLpGvvAa-~T~~PVIGVPv~s~~l~G~DsLlSivQ-MP~GvpVaTvaig~~ga~NAallA~qILa~-~ 155 (181)
T 4b4k_A 79 KVIIAGAGGAAHLPGMVAA-KTNLPVIGVPVQSKALNGLDSLLSIVQ-MPGGVPVATVAIGKAGSTNAGLLAAQILGS-F 155 (181)
T ss_dssp CEEEEEECSSCCHHHHHHT-TCCSCEEEEECCCTTTTTHHHHHHHHT-CCTTCCCEECCSSHHHHHHHHHHHHHHHTT-T
T ss_pred eEEEEeccccccchhhHHh-cCCCCEEEEecCCCCccchhhHHHHHh-CCCCCceEEEecCCccHHHHHHHHHHHHcc-C
Confidence 4477766643 33333 45689999998543 2222222222 33333332 1 12233333333222 2
Q ss_pred HhHHHHHHHHHHHHHHHHHHHHcC
Q 011792 433 NKRDKIMESTVQIAKMARDAVKEG 456 (477)
Q Consensus 433 ~~~~~~~~~a~~l~~~~~~~~~~g 456 (477)
| ++++++.+.+++.+++.++++
T Consensus 156 d--~~l~~kl~~~r~~~~~~v~~~ 177 (181)
T 4b4k_A 156 H--DDIHDALELRREAIEKDVREG 177 (181)
T ss_dssp C--HHHHHHHHHHHHHHHHHHHHC
T ss_pred C--HHHHHHHHHHHHHHHHHHHHh
Confidence 5 889999988888887765444
No 108
>2ejb_A Probable aromatic acid decarboxylase; phenylacrylic acid decarboxylase, X-RAY diffraction, structural genomics, NPPSFA; 2.15A {Aquifex aeolicus}
Probab=49.57 E-value=20 Score=30.21 Aligned_cols=44 Identities=18% Similarity=0.157 Sum_probs=35.1
Q ss_pred CEEEEEcCCCCCCHHHHHHHHHHHHhCCCeEEEEeCCccchhccC
Q 011792 7 PHVVLLPFPAYGHIKPMLSLAKLFSHAGFRITFVNTDQYHDRLFG 51 (477)
Q Consensus 7 ~~il~~~~~~~GHv~p~l~La~~L~~rGH~Vt~~~~~~~~~~l~~ 51 (477)
+||++.-.|+.|-. =...+.+.|.++|++|.++.++.-...+..
T Consensus 2 k~IllgvTGs~aa~-k~~~l~~~L~~~g~~V~vv~T~~A~~~i~~ 45 (189)
T 2ejb_A 2 QKIALCITGASGVI-YGIKLLQVLEELDFSVDLVISRNAKVVLKE 45 (189)
T ss_dssp CEEEEEECSSTTHH-HHHHHHHHHHHTTCEEEEEECHHHHHHHHH
T ss_pred CEEEEEEECHHHHH-HHHHHHHHHHHCCCEEEEEEChhHHHHhhH
Confidence 48999999988855 578899999999999999999655444433
No 109
>3goc_A Endonuclease V; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: YES; 1.60A {Streptomyces avermitilis}
Probab=48.82 E-value=26 Score=30.50 Aligned_cols=41 Identities=17% Similarity=0.088 Sum_probs=31.9
Q ss_pred HHHHHHHHhcCCCCCeEEEECCCcc-------hHHHHHHHcCCCeEEE
Q 011792 97 KLAFRQLLMTPGRLPTCIISDSIMS-------FAIDVAEELNIPIITF 137 (477)
Q Consensus 97 ~~~l~~~l~~~~~~~D~vI~D~~~~-------~~~~~A~~lgiP~v~~ 137 (477)
.+.+.+++++...+||+|++|..-. -|..+.-.+|+|+|.+
T Consensus 94 ~P~ll~al~~L~~~PdlllvDG~GiaHPRr~GlAsHlGv~l~~PtIGV 141 (237)
T 3goc_A 94 IPTVLAALDALPCPPGLIVCDGYGVAHPRRFGLASHLGVLTGLPTIGV 141 (237)
T ss_dssp HHHHHHHHHTSSSCCSEEEEESCSSCSTTSCCHHHHHHHHHCSCEEEE
T ss_pred HHHHHHHHHhcCCCCCEEEEeCceeecCCCcchhheeeeecCCCEEee
Confidence 4566667777556899999998766 3667788889999996
No 110
>1u11_A PURE (N5-carboxyaminoimidazole ribonucleotide MUT; acidophIle, protein stability, lyase; HET: CIT; 1.55A {Acetobacter aceti} SCOP: c.23.8.1 PDB: 2fwj_A* 2fw1_A* 2fwb_A 2fwa_A 2fw9_A 2fw7_A 2fw6_A 2fwp_A* 2fwi_A* 2fw8_A
Probab=48.81 E-value=88 Score=25.91 Aligned_cols=140 Identities=10% Similarity=0.071 Sum_probs=80.4
Q ss_pred CcEEEEEecCcccCCHHHHHHHHHHHHhCCCcEEEEEecCCcCCCCCCCCCchhhHhhhcCCCceeeccCHHHHHhc---
Q 011792 287 RSVLYVSFGSFIKLSGDQILEFWHGIVNSGKGFLWVIRSDLIDGESGVGPVPAELDQGTKERGCIVSWAPQEEVLAH--- 363 (477)
Q Consensus 287 ~~~v~vs~Gs~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~~p~~~ll~~--- 363 (477)
.+.|-|-+||.. +....+.....++.++..+-+.+.+ .+..|+.+. .+...
T Consensus 21 ~~~V~IimGS~S--D~~v~~~a~~~L~~~Gi~~dv~V~S--------aHR~p~~l~----------------~~~~~a~~ 74 (182)
T 1u11_A 21 APVVGIIMGSQS--DWETMRHADALLTELEIPHETLIVS--------AHRTPDRLA----------------DYARTAAE 74 (182)
T ss_dssp CCSEEEEESSGG--GHHHHHHHHHHHHHTTCCEEEEECC--------TTTCHHHHH----------------HHHHHTTT
T ss_pred CCEEEEEECcHH--HHHHHHHHHHHHHHcCCCeEEEEEc--------ccCCHHHHH----------------HHHHHHHh
Confidence 345777777774 6777888888999999887666632 234454322 22221
Q ss_pred ccccccccccCch----hHHHHhhcCCceecCCccch--hhhhH--HHHhhhhceeee---cc--CCCCHHHHHHHHHHH
Q 011792 364 QAIGGFLTHSGWN----STLESMVAGVPMICWPQVGD--QQVNS--RCVSEIWKIGFD---MK--DTCDRSTIEKLVRDL 430 (477)
Q Consensus 364 ~~~~~~I~HGG~g----s~~eal~~GvP~l~~P~~~D--Q~~na--~rv~~~~G~G~~---l~--~~~~~~~l~~~v~~l 430 (477)
..++++|.=.|.. ++..++ .-+|+|.+|.... .-..+ ..+.---|+.+. ++ +.+++.-++..|..
T Consensus 75 ~g~~ViIa~AG~aa~LpgvvA~~-t~~PVIgVP~~~~~l~G~dsLlSivqmP~GvpVatV~I~~a~~~nAallAaqIla- 152 (182)
T 1u11_A 75 RGLNVIIAGAGGAAHLPGMCAAW-TRLPVLGVPVESRALKGMDSLLSIVQMPGGVPVGTLAIGASGAKNAALLAASILA- 152 (182)
T ss_dssp TTCCEEEEEEESSCCHHHHHHHH-CSSCEEEEEECCTTTTTHHHHHHHHCCCTTSCCEECCSSHHHHHHHHHHHHHHHG-
T ss_pred CCCcEEEEecCchhhhHHHHHhc-cCCCEEEeeCCCCCCCcHHHHHHHhcCCCCCceEEEecCCccchHHHHHHHHHHc-
Confidence 1134488777653 444444 4789999998542 11111 112101255532 22 23455555555442
Q ss_pred HhHhHHHHHHHHHHHHHHHHHHHHcC
Q 011792 431 MDNKRDKIMESTVQIAKMARDAVKEG 456 (477)
Q Consensus 431 l~~~~~~~~~~a~~l~~~~~~~~~~g 456 (477)
+.| +.++++.+.+++..++.+.+.
T Consensus 153 ~~d--~~l~~kL~~~r~~~~~~v~~~ 176 (182)
T 1u11_A 153 LYN--PALAARLETWRALQTASVPNS 176 (182)
T ss_dssp GGC--HHHHHHHHHHHHHHHHHSCSS
T ss_pred cCC--HHHHHHHHHHHHHHHHHHHHh
Confidence 235 899999999999888764443
No 111
>1p3y_1 MRSD protein; flavoprotein, FMN, rossmann fold, HFCD family, oxdidative decarboxylation, cystein, lantibiotics, mersacidin, oxidore; HET: FAD; 2.54A {Bacillus SP} SCOP: c.34.1.1
Probab=48.40 E-value=10 Score=32.21 Aligned_cols=43 Identities=14% Similarity=0.034 Sum_probs=34.1
Q ss_pred CCEEEEEcCCCCCCHHHHHHHHHHHHhCCCeEEEEeCCccchhc
Q 011792 6 VPHVVLLPFPAYGHIKPMLSLAKLFSHAGFRITFVNTDQYHDRL 49 (477)
Q Consensus 6 ~~~il~~~~~~~GHv~p~l~La~~L~~rGH~Vt~~~~~~~~~~l 49 (477)
..||++.-.|+.|=.. ...|.+.|.++|++|.++.++.-...+
T Consensus 8 ~k~IllgvTGs~aa~k-~~~l~~~L~~~g~~V~vv~T~~A~~fi 50 (194)
T 1p3y_1 8 DKKLLIGICGSISSVG-ISSYLLYFKSFFKEIRVVMTKTAEDLI 50 (194)
T ss_dssp GCEEEEEECSCGGGGG-THHHHHHHTTTSSEEEEEECHHHHHHS
T ss_pred CCEEEEEEECHHHHHH-HHHHHHHHHHCCCEEEEEEchhHHHHH
Confidence 4688888888866665 789999999999999999986544443
No 112
>3ezx_A MMCP 1, monomethylamine corrinoid protein 1; N terminal all helical bundle C terminal rossmann fold, cobalt, metal-binding; HET: HCB; 2.56A {Methanosarcina barkeri}
Probab=48.25 E-value=19 Score=30.99 Aligned_cols=44 Identities=11% Similarity=0.113 Sum_probs=38.0
Q ss_pred CCEEEEEcCCCCCCHHHHHHHHHHHHhCCCeEEEEeCCccchhc
Q 011792 6 VPHVVLLPFPAYGHIKPMLSLAKLFSHAGFRITFVNTDQYHDRL 49 (477)
Q Consensus 6 ~~~il~~~~~~~GHv~p~l~La~~L~~rGH~Vt~~~~~~~~~~l 49 (477)
+.+|++.+.++-.|-....-++..|..+|++|+.+...--.+.+
T Consensus 92 ~~~vll~~v~gd~HdiG~~iv~~~l~~~G~~Vi~LG~~vp~e~i 135 (215)
T 3ezx_A 92 AGLAITFVAEGDIHDIGHRLVTTMLGANGFQIVDLGVDVLNENV 135 (215)
T ss_dssp CCEEEEEECTTCCCCHHHHHHHHHHHHTSCEEEECCSSCCHHHH
T ss_pred CCeEEEEeCCCChhHHHHHHHHHHHHHCCCeEEEcCCCCCHHHH
Confidence 57999999999999999999999999999999998765333343
No 113
>1qzu_A Hypothetical protein MDS018; alpha-beta sandwich, lyase; HET: FMN; 2.91A {Homo sapiens} SCOP: c.34.1.1
Probab=47.93 E-value=16 Score=31.21 Aligned_cols=43 Identities=14% Similarity=0.153 Sum_probs=32.2
Q ss_pred CCEEEEEcCCCCCCHHHHHHHHHHHHh-CCCeEEEEeCCccchhc
Q 011792 6 VPHVVLLPFPAYGHIKPMLSLAKLFSH-AGFRITFVNTDQYHDRL 49 (477)
Q Consensus 6 ~~~il~~~~~~~GHv~p~l~La~~L~~-rGH~Vt~~~~~~~~~~l 49 (477)
++||++...|+.+=. -...|.+.|.+ +|++|.++.++.-...+
T Consensus 19 ~k~IllgvTGsiaa~-k~~~lv~~L~~~~g~~V~vv~T~~A~~fi 62 (206)
T 1qzu_A 19 KFHVLVGVTGSVAAL-KLPLLVSKLLDIPGLEVAVVTTERAKHFY 62 (206)
T ss_dssp SEEEEEEECSSGGGG-THHHHHHHHC---CEEEEEEECTGGGGSS
T ss_pred CCEEEEEEeChHHHH-HHHHHHHHHhcccCCEEEEEECHhHHHHh
Confidence 468888888886644 46899999999 89999999996654444
No 114
>3e9m_A Oxidoreductase, GFO/IDH/MOCA family; GFO/LDH/MOCA, PSI-II, dimeric dihydodiol dehydrogenase, structural genomics; 2.70A {Enterococcus faecalis}
Probab=47.73 E-value=74 Score=29.15 Aligned_cols=62 Identities=10% Similarity=0.045 Sum_probs=37.0
Q ss_pred ccCHHHHHhcccccccccccCch----hHHHHhhcCCceec-CCccc--hhhhhHHHHhhhhceeeecc
Q 011792 354 WAPQEEVLAHQAIGGFLTHSGWN----STLESMVAGVPMIC-WPQVG--DQQVNSRCVSEIWKIGFDMK 415 (477)
Q Consensus 354 ~~p~~~ll~~~~~~~~I~HGG~g----s~~eal~~GvP~l~-~P~~~--DQ~~na~rv~~~~G~G~~l~ 415 (477)
+-...++|..+++++|+--.-.. .+.+++.+|+++++ -|+.. ++-.-...++++.|+-+...
T Consensus 56 ~~~~~~ll~~~~~D~V~i~tp~~~h~~~~~~al~~gk~vl~EKP~~~~~~e~~~l~~~a~~~g~~~~v~ 124 (330)
T 3e9m_A 56 YGSYEELCKDETIDIIYIPTYNQGHYSAAKLALSQGKPVLLEKPFTLNAAEAEELFAIAQEQGVFLMEA 124 (330)
T ss_dssp BSSHHHHHHCTTCSEEEECCCGGGHHHHHHHHHHTTCCEEECSSCCSSHHHHHHHHHHHHHTTCCEEEC
T ss_pred eCCHHHHhcCCCCCEEEEcCCCHHHHHHHHHHHHCCCeEEEeCCCCCCHHHHHHHHHHHHHcCCeEEEE
Confidence 45677888866665566544433 36788999999876 35543 33333333445556655554
No 115
>2w36_A Endonuclease V; hypoxanthine, endonuclease, endonucleasev, hydrolase, inosine, DNA damage, DNA repair; HET: BRU; 2.10A {Thermotoga maritima} PDB: 2w35_A 3hd0_A
Probab=47.44 E-value=29 Score=30.04 Aligned_cols=41 Identities=17% Similarity=0.105 Sum_probs=31.0
Q ss_pred HHHHHHHHhcCCCCCeEEEECCCcch-------HHHHHHHcCCCeEEE
Q 011792 97 KLAFRQLLMTPGRLPTCIISDSIMSF-------AIDVAEELNIPIITF 137 (477)
Q Consensus 97 ~~~l~~~l~~~~~~~D~vI~D~~~~~-------~~~~A~~lgiP~v~~ 137 (477)
.+.+.+++++...+||+|++|..-.. |..+...+|+|+|.+
T Consensus 90 ~P~~l~al~~L~~~PdlllvDG~Gi~HpR~~GlA~HlGv~l~~PtIGV 137 (225)
T 2w36_A 90 GPLFLKAWEKLRTKPDVVVFDGQGLAHPRKLGIASHMGLFIEIPTIGV 137 (225)
T ss_dssp HHHHHHHHTTCCSCCSEEEEESCSSSSTTSCCHHHHHHHHHTSCEEEE
T ss_pred hHHHHHHHHhcCCCCCEEEEeCeEEEcCCCCCchhhhhhhhCCCEEEE
Confidence 34566667776668999999997773 455677778999996
No 116
>3tqq_A Methionyl-tRNA formyltransferase; protein synthesis; 2.00A {Coxiella burnetii}
Probab=47.29 E-value=66 Score=29.46 Aligned_cols=34 Identities=15% Similarity=0.260 Sum_probs=25.7
Q ss_pred CCEEEEEcCCCCCCHHHHHHHHHHHHhCCCeEEEEeCCc
Q 011792 6 VPHVVLLPFPAYGHIKPMLSLAKLFSHAGFRITFVNTDQ 44 (477)
Q Consensus 6 ~~~il~~~~~~~GHv~p~l~La~~L~~rGH~Vt~~~~~~ 44 (477)
+|||+|+-.+..+ .+.-++|.++||+|..+.+..
T Consensus 2 ~mrivf~Gtp~fa-----~~~L~~L~~~~~~v~~Vvt~p 35 (314)
T 3tqq_A 2 SLKIVFAGTPQFA-----VPTLRALIDSSHRVLAVYTQP 35 (314)
T ss_dssp CCEEEEEECSGGG-----HHHHHHHHHSSSEEEEEECCC
T ss_pred CcEEEEECCCHHH-----HHHHHHHHHCCCeEEEEEeCC
Confidence 4899999877533 455688888999998877643
No 117
>2i2c_A Probable inorganic polyphosphate/ATP-NAD kinase 1; NADP bound of lmnadk1, transferase; HET: DTA PG4; 1.85A {Listeria monocytogenes egd-e} PDB: 2i1w_A* 2i2a_A* 2i2b_A* 2i29_A* 2i2d_A* 2i2e_A* 3v7u_A* 3v7w_A* 3v7y_A* 3v80_A* 3v8m_A* 3v8n_A* 3v8p_A* 4dy6_A* 2i2f_A* 2q5f_A* 3v8q_A* 3v8r_A*
Probab=46.71 E-value=12 Score=33.56 Aligned_cols=50 Identities=14% Similarity=0.109 Sum_probs=35.5
Q ss_pred cccccccCchhHHHHhhc------CCceecCCccchhhhhHHHHhhhhceeeeccCCCCHHHHHHHHHHHHh
Q 011792 367 GGFLTHSGWNSTLESMVA------GVPMICWPQVGDQQVNSRCVSEIWKIGFDMKDTCDRSTIEKLVRDLMD 432 (477)
Q Consensus 367 ~~~I~HGG~gs~~eal~~------GvP~l~~P~~~DQ~~na~rv~~~~G~G~~l~~~~~~~~l~~~v~~ll~ 432 (477)
+++|.=||=||+.+++.. ++|++.+|.. . +|. + ..+.++++.+++.++++
T Consensus 37 D~vv~lGGDGT~l~aa~~~~~~~~~~PilGIn~G-----------~-lgf---l-~~~~~~~~~~~l~~l~~ 92 (272)
T 2i2c_A 37 EIVISIGGDGTFLSAFHQYEERLDEIAFIGIHTG-----------H-LGF---Y-ADWRPAEADKLVKLLAK 92 (272)
T ss_dssp SEEEEEESHHHHHHHHHHTGGGTTTCEEEEEESS-----------S-CCS---S-CCBCGGGHHHHHHHHHT
T ss_pred CEEEEEcCcHHHHHHHHHHhhcCCCCCEEEEeCC-----------C-CCc---C-CcCCHHHHHHHHHHHHc
Confidence 449999999999999765 8898888651 1 121 1 23457778888887776
No 118
>2b8t_A Thymidine kinase; deoxyribonucleoside kinase, zinc-binding domain, TK1, UU-TK, transferase; HET: THM; 2.00A {Ureaplasma parvum} SCOP: c.37.1.24 g.39.1.14 PDB: 2uz3_A*
Probab=46.60 E-value=1.1e+02 Score=26.39 Aligned_cols=39 Identities=8% Similarity=0.120 Sum_probs=32.8
Q ss_pred CCEEEEEcCC-CCCCHHHHHHHHHHHHhCCCeEEEEeCCc
Q 011792 6 VPHVVLLPFP-AYGHIKPMLSLAKLFSHAGFRITFVNTDQ 44 (477)
Q Consensus 6 ~~~il~~~~~-~~GHv~p~l~La~~L~~rGH~Vt~~~~~~ 44 (477)
+-.+.+++.+ +.|=..-++.++..+..+|..|.++.+..
T Consensus 11 ~G~i~litG~mGsGKTT~ll~~~~r~~~~g~kVli~~~~~ 50 (223)
T 2b8t_A 11 IGWIEFITGPMFAGKTAELIRRLHRLEYADVKYLVFKPKI 50 (223)
T ss_dssp CCEEEEEECSTTSCHHHHHHHHHHHHHHTTCCEEEEEECC
T ss_pred CcEEEEEECCCCCcHHHHHHHHHHHHHhcCCEEEEEEecc
Confidence 3457777775 88999999999999999999999998744
No 119
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=46.50 E-value=13 Score=29.79 Aligned_cols=33 Identities=9% Similarity=0.162 Sum_probs=25.8
Q ss_pred CCEEEEEcCCCCCCHHHHHHHHHHHHhCCCeEEEEeCC
Q 011792 6 VPHVVLLPFPAYGHIKPMLSLAKLFSHAGFRITFVNTD 43 (477)
Q Consensus 6 ~~~il~~~~~~~GHv~p~l~La~~L~~rGH~Vt~~~~~ 43 (477)
+.||+++- .|++- ..+++.|.++||+|+++...
T Consensus 3 ~~~vlI~G---~G~vG--~~la~~L~~~g~~V~vid~~ 35 (153)
T 1id1_A 3 KDHFIVCG---HSILA--INTILQLNQRGQNVTVISNL 35 (153)
T ss_dssp CSCEEEEC---CSHHH--HHHHHHHHHTTCCEEEEECC
T ss_pred CCcEEEEC---CCHHH--HHHHHHHHHCCCCEEEEECC
Confidence 35788883 35554 78899999999999999873
No 120
>2pju_A Propionate catabolism operon regulatory protein; structural genomics, PRPR, transcriptional regulation, PSI- 2, protein structure initiative; 2.10A {Escherichia coli} SCOP: c.92.3.1
Probab=46.03 E-value=19 Score=31.27 Aligned_cols=29 Identities=21% Similarity=0.265 Sum_probs=24.0
Q ss_pred ccccccccCchhHHHHhhcCCceecCCccc
Q 011792 366 IGGFLTHSGWNSTLESMVAGVPMICWPQVG 395 (477)
Q Consensus 366 ~~~~I~HGG~gs~~eal~~GvP~l~~P~~~ 395 (477)
++++|+.||.+.....- .++|+|-++..+
T Consensus 64 ~dVIISRGgta~~Lr~~-~~iPVV~I~vs~ 92 (225)
T 2pju_A 64 CDAIIAAGSNGAYLKSR-LSVPVILIKPSG 92 (225)
T ss_dssp CSEEEEEHHHHHHHHTT-CSSCEEEECCCH
T ss_pred CeEEEeCChHHHHHHhh-CCCCEEEecCCH
Confidence 34499999999998875 689999999854
No 121
>4hkt_A Inositol 2-dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium, oxidoreductase; HET: MSE; 2.00A {Sinorhizobium meliloti}
Probab=45.36 E-value=92 Score=28.44 Aligned_cols=77 Identities=16% Similarity=0.051 Sum_probs=44.0
Q ss_pred ccCHHHHHhcccccccccccC----chhHHHHhhcCCceec-CCccc--hhhhhHHHHhhhhceeeecc--CCCCHHHHH
Q 011792 354 WAPQEEVLAHQAIGGFLTHSG----WNSTLESMVAGVPMIC-WPQVG--DQQVNSRCVSEIWKIGFDMK--DTCDRSTIE 424 (477)
Q Consensus 354 ~~p~~~ll~~~~~~~~I~HGG----~gs~~eal~~GvP~l~-~P~~~--DQ~~na~rv~~~~G~G~~l~--~~~~~~~l~ 424 (477)
+-...+++..+++++++---- ..-+.+++.+|+++++ -|+.. ++-.--..++++.|+-+... ..+.+. .
T Consensus 52 ~~~~~~~l~~~~~D~V~i~tp~~~h~~~~~~al~~gk~v~~EKP~~~~~~~~~~l~~~a~~~g~~~~v~~~~r~~p~--~ 129 (331)
T 4hkt_A 52 VRTIDAIEAAADIDAVVICTPTDTHADLIERFARAGKAIFCEKPIDLDAERVRACLKVVSDTKAKLMVGFNRRFDPH--F 129 (331)
T ss_dssp ECCHHHHHHCTTCCEEEECSCGGGHHHHHHHHHHTTCEEEECSCSCSSHHHHHHHHHHHHHTTCCEEECCGGGGCHH--H
T ss_pred cCCHHHHhcCCCCCEEEEeCCchhHHHHHHHHHHcCCcEEEecCCCCCHHHHHHHHHHHHHcCCeEEEcccccCCHH--H
Confidence 667788888666655664332 3456788999999887 36543 33333333445567666654 234432 3
Q ss_pred HHHHHHHh
Q 011792 425 KLVRDLMD 432 (477)
Q Consensus 425 ~~v~~ll~ 432 (477)
..+++++.
T Consensus 130 ~~~~~~i~ 137 (331)
T 4hkt_A 130 MAVRKAID 137 (331)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 34444443
No 122
>3dfu_A Uncharacterized protein from 6-phosphogluconate dehydrogenase-like family; putative rossmann-like dehydrogenase, structural genomics; HET: MSE; 2.07A {Corynebacterium glutamicum}
Probab=45.35 E-value=16 Score=31.98 Aligned_cols=36 Identities=14% Similarity=0.169 Sum_probs=28.4
Q ss_pred CCCCCCCEEEEEcCCCCCCHHHHHHHHHHHHhCCCeEEEEeC
Q 011792 1 MEQTRVPHVVLLPFPAYGHIKPMLSLAKLFSHAGFRITFVNT 42 (477)
Q Consensus 1 m~~~~~~~il~~~~~~~GHv~p~l~La~~L~~rGH~Vt~~~~ 42 (477)
|... +|||.|+-.|..|- .||+.|.++||+|+.+..
T Consensus 2 ~~~~-~mkI~IIG~G~~G~-----sLA~~L~~~G~~V~~~~~ 37 (232)
T 3dfu_A 2 MQAP-RLRVGIFDDGSSTV-----NMAEKLDSVGHYVTVLHA 37 (232)
T ss_dssp -CCC-CCEEEEECCSCCCS-----CHHHHHHHTTCEEEECSS
T ss_pred CCCC-CcEEEEEeeCHHHH-----HHHHHHHHCCCEEEEecC
Confidence 4443 58999999988874 589999999999987654
No 123
>1fmt_A Methionyl-tRNA FMet formyltransferase; initiator tRNA, translation initiation; 2.00A {Escherichia coli} SCOP: b.46.1.1 c.65.1.1 PDB: 2fmt_A* 3r8x_A
Probab=44.34 E-value=1e+02 Score=28.22 Aligned_cols=33 Identities=12% Similarity=0.076 Sum_probs=24.5
Q ss_pred CCEEEEEcCCCCCCHHHHHHHHHHHHhCCCeEEEEeCC
Q 011792 6 VPHVVLLPFPAYGHIKPMLSLAKLFSHAGFRITFVNTD 43 (477)
Q Consensus 6 ~~~il~~~~~~~GHv~p~l~La~~L~~rGH~Vt~~~~~ 43 (477)
+|||+|+-.+. .....-++|.+.||+|..+.+.
T Consensus 3 ~mrIvf~Gt~~-----fa~~~L~~L~~~~~~i~~Vvt~ 35 (314)
T 1fmt_A 3 SLRIIFAGTPD-----FAARHLDALLSSGHNVVGVFTQ 35 (314)
T ss_dssp CCEEEEEECSH-----HHHHHHHHHHHTTCEEEEEECC
T ss_pred CCEEEEEecCH-----HHHHHHHHHHHCCCcEEEEEeC
Confidence 68999997754 3355567788889999877664
No 124
>3mcu_A Dipicolinate synthase, B chain; NESG, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.30A {Bacillus cereus}
Probab=43.66 E-value=22 Score=30.39 Aligned_cols=38 Identities=5% Similarity=-0.123 Sum_probs=31.0
Q ss_pred CCEEEEEcCCCCCCHHH-HHHHHHHHHhCCCeEEEEeCCc
Q 011792 6 VPHVVLLPFPAYGHIKP-MLSLAKLFSHAGFRITFVNTDQ 44 (477)
Q Consensus 6 ~~~il~~~~~~~GHv~p-~l~La~~L~~rGH~Vt~~~~~~ 44 (477)
.+||++.-.|+ +...- ...|.+.|+++|++|.++.++.
T Consensus 5 ~k~IllgiTGs-iaayk~~~~ll~~L~~~g~eV~vv~T~~ 43 (207)
T 3mcu_A 5 GKRIGFGFTGS-HCTYEEVMPHLEKLIAEGAEVRPVVSYT 43 (207)
T ss_dssp TCEEEEEECSC-GGGGTTSHHHHHHHHHTTCEEEEEECC-
T ss_pred CCEEEEEEECh-HHHHHHHHHHHHHHHhCCCEEEEEEehH
Confidence 47898888887 45554 7899999999999999999854
No 125
>2gk4_A Conserved hypothetical protein; alpha-beta-alpha sandwich, flavoprotein, structural genomics protein structure initiative; 1.83A {Streptococcus pneumoniae}
Probab=43.55 E-value=30 Score=30.20 Aligned_cols=26 Identities=19% Similarity=0.401 Sum_probs=20.9
Q ss_pred CCCHHHHHHHHHHHHhCCCeEEEEeCCc
Q 011792 17 YGHIKPMLSLAKLFSHAGFRITFVNTDQ 44 (477)
Q Consensus 17 ~GHv~p~l~La~~L~~rGH~Vt~~~~~~ 44 (477)
.|. .-.++|++|.++|++|+++..+.
T Consensus 28 SG~--mG~aiA~~~~~~Ga~V~lv~~~~ 53 (232)
T 2gk4_A 28 TGH--LGKIITETLLSAGYEVCLITTKR 53 (232)
T ss_dssp CCH--HHHHHHHHHHHTTCEEEEEECTT
T ss_pred CCH--HHHHHHHHHHHCCCEEEEEeCCc
Confidence 454 45678999999999999998743
No 126
>3m2t_A Probable dehydrogenase; PSI, SGXNY, structural genomics, protein structure initiative; HET: NAD; 2.30A {Chromobacterium violaceum}
Probab=42.54 E-value=69 Score=29.82 Aligned_cols=110 Identities=12% Similarity=0.049 Sum_probs=58.2
Q ss_pred cEEEEEecCcccCCHHHHHHHHHHHHhC-CCcEEEEEecCCcCCCCCCCCCchhhHhhhcCCC-ceeeccCHHHHHhccc
Q 011792 288 SVLYVSFGSFIKLSGDQILEFWHGIVNS-GKGFLWVIRSDLIDGESGVGPVPAELDQGTKERG-CIVSWAPQEEVLAHQA 365 (477)
Q Consensus 288 ~~v~vs~Gs~~~~~~~~~~~~~~a~~~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~nv-~~~~~~p~~~ll~~~~ 365 (477)
.+.+|++|.+.. ..++.++... +..++.+...+ +...+...+.. ...-+-...++|..++
T Consensus 7 rigiIG~G~~g~------~~~~~~l~~~~~~~l~av~d~~------------~~~~~~~a~~~~~~~~~~~~~~ll~~~~ 68 (359)
T 3m2t_A 7 KVGLVGIGAQMQ------ENLLPSLLQMQDIRIVAACDSD------------LERARRVHRFISDIPVLDNVPAMLNQVP 68 (359)
T ss_dssp EEEEECCSHHHH------HTHHHHHHTCTTEEEEEEECSS------------HHHHGGGGGTSCSCCEESSHHHHHHHSC
T ss_pred eEEEECCCHHHH------HHHHHHHHhCCCcEEEEEEcCC------------HHHHHHHHHhcCCCcccCCHHHHhcCCC
Confidence 366778887642 2356667665 44555455221 11111111221 1223456788998887
Q ss_pred ccccccccCch----hHHHHhhcCCceec-CCccc--hhhhhHHHHhhhhceeeecc
Q 011792 366 IGGFLTHSGWN----STLESMVAGVPMIC-WPQVG--DQQVNSRCVSEIWKIGFDMK 415 (477)
Q Consensus 366 ~~~~I~HGG~g----s~~eal~~GvP~l~-~P~~~--DQ~~na~rv~~~~G~G~~l~ 415 (477)
+++|+-..-.. -+.+|+.+|+++++ -|+.. ++-.-...++++.|+-+.+.
T Consensus 69 vD~V~i~tp~~~H~~~~~~al~aGkhVl~EKPla~~~~e~~~l~~~a~~~g~~~~v~ 125 (359)
T 3m2t_A 69 LDAVVMAGPPQLHFEMGLLAMSKGVNVFVEKPPCATLEELETLIDAARRSDVVSGVG 125 (359)
T ss_dssp CSEEEECSCHHHHHHHHHHHHHTTCEEEECSCSCSSHHHHHHHHHHHHHHTCCEEEC
T ss_pred CCEEEEcCCcHHHHHHHHHHHHCCCeEEEECCCcCCHHHHHHHHHHHHHcCCEEEEE
Confidence 66677554433 36678889999876 36544 33333333344456544443
No 127
>3e18_A Oxidoreductase; dehydrogenase, NAD-binding, structural genom protein structure initiative, PSI, NEW YORK structural GENO research consortium; HET: NAD; 1.95A {Listeria innocua}
Probab=41.80 E-value=1.4e+02 Score=27.59 Aligned_cols=123 Identities=12% Similarity=0.166 Sum_probs=64.7
Q ss_pred cEEEEEecCcccCCHHHHHHHHHHHHhC-CCcEEEEEecCCcCCCCCCCCCchhhHhhhcCCCceeeccCHHHHHhcccc
Q 011792 288 SVLYVSFGSFIKLSGDQILEFWHGIVNS-GKGFLWVIRSDLIDGESGVGPVPAELDQGTKERGCIVSWAPQEEVLAHQAI 366 (477)
Q Consensus 288 ~~v~vs~Gs~~~~~~~~~~~~~~a~~~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~~p~~~ll~~~~~ 366 (477)
.+.+|++|.+. ...+.++... +..++.+... .+.........++ ..+-...++|..+++
T Consensus 7 ~vgiiG~G~~g-------~~~~~~l~~~~~~~l~av~d~-----------~~~~~~~a~~~g~--~~~~~~~~ll~~~~~ 66 (359)
T 3e18_A 7 QLVIVGYGGMG-------SYHVTLASAADNLEVHGVFDI-----------LAEKREAAAQKGL--KIYESYEAVLADEKV 66 (359)
T ss_dssp EEEEECCSHHH-------HHHHHHHHTSTTEEEEEEECS-----------SHHHHHHHHTTTC--CBCSCHHHHHHCTTC
T ss_pred cEEEECcCHHH-------HHHHHHHHhCCCcEEEEEEcC-----------CHHHHHHHHhcCC--ceeCCHHHHhcCCCC
Confidence 46778888765 2345566655 3454444421 1111111111122 335567888987666
Q ss_pred cccccccCch----hHHHHhhcCCceec-CCccc--hhhhhHHHHhhhhceeeecc--CCCCHHHHHHHHHHHHh
Q 011792 367 GGFLTHSGWN----STLESMVAGVPMIC-WPQVG--DQQVNSRCVSEIWKIGFDMK--DTCDRSTIEKLVRDLMD 432 (477)
Q Consensus 367 ~~~I~HGG~g----s~~eal~~GvP~l~-~P~~~--DQ~~na~rv~~~~G~G~~l~--~~~~~~~l~~~v~~ll~ 432 (477)
++|+--.-.. -+.+|+.+|+++++ -|+.. ++-.-...++++.|+-+.+. ..+.+. ...+++++.
T Consensus 67 D~V~i~tp~~~h~~~~~~al~aGkhVl~EKP~a~~~~ea~~l~~~a~~~g~~~~v~~~~r~~p~--~~~~k~~i~ 139 (359)
T 3e18_A 67 DAVLIATPNDSHKELAISALEAGKHVVCEKPVTMTSEDLLAIMDVAKRVNKHFMVHQNRRWDED--FLIIKEMFE 139 (359)
T ss_dssp CEEEECSCGGGHHHHHHHHHHTTCEEEEESSCCSSHHHHHHHHHHHHHHTCCEEEECGGGGCHH--HHHHHHHHH
T ss_pred CEEEEcCCcHHHHHHHHHHHHCCCCEEeeCCCcCCHHHHHHHHHHHHHhCCeEEEEeeeccCHH--HHHHHHHHH
Confidence 6676544433 46788999999987 45543 34333334445556554443 244443 334455554
No 128
>3oow_A Phosphoribosylaminoimidazole carboxylase,catalyic; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE; 1.75A {Francisella tularensis subsp} SCOP: c.23.8.1 PDB: 3opq_A*
Probab=41.73 E-value=1.4e+02 Score=24.28 Aligned_cols=143 Identities=13% Similarity=0.072 Sum_probs=79.6
Q ss_pred cEEEEEecCcccCCHHHHHHHHHHHHhCCCcEEEEEecCCcCCCCCCCCCchhhHhhhcCCCceeeccCHHHHHhccccc
Q 011792 288 SVLYVSFGSFIKLSGDQILEFWHGIVNSGKGFLWVIRSDLIDGESGVGPVPAELDQGTKERGCIVSWAPQEEVLAHQAIG 367 (477)
Q Consensus 288 ~~v~vs~Gs~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~~p~~~ll~~~~~~ 367 (477)
|.|-|-+||.. +....+.....++.++..+-+.+.+ .+..|+.+.+- ..=+....++
T Consensus 6 p~V~IimgS~S--D~~v~~~a~~~l~~~gi~~ev~V~S--------aHRtp~~l~~~-------------~~~~~~~g~~ 62 (166)
T 3oow_A 6 VQVGVIMGSKS--DWSTMKECCDILDNLGIGYECEVVS--------AHRTPDKMFDY-------------AETAKERGLK 62 (166)
T ss_dssp EEEEEEESSGG--GHHHHHHHHHHHHHTTCEEEEEECC--------TTTCHHHHHHH-------------HHHTTTTTCC
T ss_pred CeEEEEECcHH--hHHHHHHHHHHHHHcCCCEEEEEEc--------CcCCHHHHHHH-------------HHHHHhCCCc
Confidence 45777777774 6777888888999999877666632 23444433211 0001112234
Q ss_pred ccccccCch----hHHHHhhcCCceecCCccchhh-hh-H--HHHhhhhceeeecc--C---CCCHHHHHHHHHHHHhHh
Q 011792 368 GFLTHSGWN----STLESMVAGVPMICWPQVGDQQ-VN-S--RCVSEIWKIGFDMK--D---TCDRSTIEKLVRDLMDNK 434 (477)
Q Consensus 368 ~~I~HGG~g----s~~eal~~GvP~l~~P~~~DQ~-~n-a--~rv~~~~G~G~~l~--~---~~~~~~l~~~v~~ll~~~ 434 (477)
++|.=.|.. ++..++ .-+|+|.+|...... .. + .-+.--.|+++..- . .+++..++..|..+ .|
T Consensus 63 ViIa~AG~aa~LpgvvA~~-t~~PVIgVP~~~~~l~G~dsLlS~vqmp~gvpVatV~I~~ag~~nAa~lAa~Il~~-~d- 139 (166)
T 3oow_A 63 VIIAGAGGAAHLPGMVAAK-TTLPVLGVPVKSSTLNGQDSLLSIVQMPAGIPVATFAIGMAGAKNAALFAASILQH-TD- 139 (166)
T ss_dssp EEEEEECSSCCHHHHHHHT-CSSCEEEEECCCTTTTTHHHHHHHHTCCTTSCCEECCSTHHHHHHHHHHHHHHHGG-GC-
T ss_pred EEEEECCcchhhHHHHHhc-cCCCEEEeecCcCCCCCHHHHHHHhcCCCCCceEEEecCCccchHHHHHHHHHHcC-CC-
Confidence 588877754 333333 358999999843211 11 1 11211125444332 1 33444444444433 25
Q ss_pred HHHHHHHHHHHHHHHHHHHHcCC
Q 011792 435 RDKIMESTVQIAKMARDAVKEGG 457 (477)
Q Consensus 435 ~~~~~~~a~~l~~~~~~~~~~gg 457 (477)
+.++++.+.+++.+++.+.+..
T Consensus 140 -~~l~~kl~~~r~~~~~~v~~~~ 161 (166)
T 3oow_A 140 -INIAKALAEFRAEQTRFVLENP 161 (166)
T ss_dssp -HHHHHHHHHHHHHHHHHHHTCC
T ss_pred -HHHHHHHHHHHHHHHHHHHhcc
Confidence 8999999999999987765543
No 129
>3sbx_A Putative uncharacterized protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: AMP; 2.50A {Mycobacterium marinum M}
Probab=41.10 E-value=38 Score=28.49 Aligned_cols=38 Identities=8% Similarity=-0.004 Sum_probs=27.5
Q ss_pred CCCEEEEEcCCCCCCH----HHHHHHHHHHHhCCCeEEEEeCC
Q 011792 5 RVPHVVLLPFPAYGHI----KPMLSLAKLFSHAGFRITFVNTD 43 (477)
Q Consensus 5 ~~~~il~~~~~~~GHv----~p~l~La~~L~~rGH~Vt~~~~~ 43 (477)
.+++|.+++... +.- .-...|++.|+++|+.|+.-...
T Consensus 12 ~~~~I~Vfg~s~-~~~~~~~~~A~~lg~~la~~g~~lv~GGG~ 53 (189)
T 3sbx_A 12 GRWTVAVYCAAA-PTHPELLELAGAVGAAIAARGWTLVWGGGH 53 (189)
T ss_dssp -CCEEEEECCSS-CCCHHHHHHHHHHHHHHHHTTCEEEECCBC
T ss_pred CCeEEEEEEeCC-CCChHHHHHHHHHHHHHHHCCCEEEECCCc
Confidence 368899888765 433 44677888899999998877543
No 130
>3kjh_A CO dehydrogenase/acetyl-COA synthase complex, accessory protein COOC; Zn-bound dimer, nickel binding protein, ATPase; 1.90A {Carboxydothermus hydrogenoformans} PDB: 3kjg_A* 3kje_A 3kji_A*
Probab=40.87 E-value=16 Score=31.82 Aligned_cols=37 Identities=16% Similarity=0.107 Sum_probs=31.3
Q ss_pred CEEEEEcCCCCCCHHHHHHHHHHHHhCCCeEEEEeCC
Q 011792 7 PHVVLLPFPAYGHIKPMLSLAKLFSHAGFRITFVNTD 43 (477)
Q Consensus 7 ~~il~~~~~~~GHv~p~l~La~~L~~rGH~Vt~~~~~ 43 (477)
|||+|..-||-|=..-...||..|+++|++|.++=.+
T Consensus 1 mkI~vs~kGGvGKTt~a~~LA~~la~~g~~VlliD~D 37 (254)
T 3kjh_A 1 MKLAVAGKGGVGKTTVAAGLIKIMASDYDKIYAVDGD 37 (254)
T ss_dssp CEEEEECSSSHHHHHHHHHHHHHHTTTCSCEEEEEEC
T ss_pred CEEEEecCCCCCHHHHHHHHHHHHHHCCCeEEEEeCC
Confidence 5788865577788889999999999999999998653
No 131
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=40.63 E-value=31 Score=26.58 Aligned_cols=32 Identities=22% Similarity=0.385 Sum_probs=24.3
Q ss_pred CCEEEEEcCCCCCCHHHHHHHHHHHHhCCCeEEEEeC
Q 011792 6 VPHVVLLPFPAYGHIKPMLSLAKLFSHAGFRITFVNT 42 (477)
Q Consensus 6 ~~~il~~~~~~~GHv~p~l~La~~L~~rGH~Vt~~~~ 42 (477)
.|+|+++- .|.+- ..+++.|.++||+|+++..
T Consensus 4 ~m~i~IiG---~G~iG--~~~a~~L~~~g~~v~~~d~ 35 (140)
T 1lss_A 4 GMYIIIAG---IGRVG--YTLAKSLSEKGHDIVLIDI 35 (140)
T ss_dssp -CEEEEEC---CSHHH--HHHHHHHHHTTCEEEEEES
T ss_pred CCEEEEEC---CCHHH--HHHHHHHHhCCCeEEEEEC
Confidence 47888882 36654 4678999999999999875
No 132
>2lpm_A Two-component response regulator; transcription regulator; NMR {Sinorhizobium meliloti}
Probab=40.50 E-value=21 Score=27.54 Aligned_cols=36 Identities=19% Similarity=0.080 Sum_probs=24.1
Q ss_pred HHHHHhcCCCCCeEEEECCCcc--hHHHHHHH---cCCCeEEE
Q 011792 100 FRQLLMTPGRLPTCIISDSIMS--FAIDVAEE---LNIPIITF 137 (477)
Q Consensus 100 l~~~l~~~~~~~D~vI~D~~~~--~~~~~A~~---lgiP~v~~ 137 (477)
..+++++. +||+||.|...+ .+..+++. .++|+|.+
T Consensus 45 Al~~~~~~--~~DlvllDi~mP~~~G~el~~~lr~~~ipvI~l 85 (123)
T 2lpm_A 45 ALDIARKG--QFDIAIIDVNLDGEPSYPVADILAERNVPFIFA 85 (123)
T ss_dssp HHHHHHHC--CSSEEEECSSSSSCCSHHHHHHHHHTCCSSCCB
T ss_pred HHHHHHhC--CCCEEEEecCCCCCCHHHHHHHHHcCCCCEEEE
Confidence 33445544 899999999887 34445444 47887665
No 133
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=40.49 E-value=15 Score=34.70 Aligned_cols=29 Identities=24% Similarity=0.282 Sum_probs=24.3
Q ss_pred CEEEEEcCCCCCCHHHHHHHHHHHHhCCCeEEEE
Q 011792 7 PHVVLLPFPAYGHIKPMLSLAKLFSHAGFRITFV 40 (477)
Q Consensus 7 ~~il~~~~~~~GHv~p~l~La~~L~~rGH~Vt~~ 40 (477)
|||+|+-.|--| +.+|..|+++||+|+++
T Consensus 2 m~V~IVGaGpaG-----l~~A~~L~~~G~~v~v~ 30 (412)
T 4hb9_A 2 MHVGIIGAGIGG-----TCLAHGLRKHGIKVTIY 30 (412)
T ss_dssp CEEEEECCSHHH-----HHHHHHHHHTTCEEEEE
T ss_pred CEEEEECcCHHH-----HHHHHHHHhCCCCEEEE
Confidence 789888666444 77899999999999998
No 134
>2d1p_A TUSD, hypothetical UPF0163 protein YHEN; tRNA modification, sulfur transfer, structural genomics, translation; 2.15A {Escherichia coli} SCOP: c.114.1.1
Probab=40.34 E-value=56 Score=25.86 Aligned_cols=39 Identities=15% Similarity=0.301 Sum_probs=28.9
Q ss_pred CCEEEEEcC-CCCCCHHH--HHHHHHHHHhCCCeE-EEEeCCc
Q 011792 6 VPHVVLLPF-PAYGHIKP--MLSLAKLFSHAGFRI-TFVNTDQ 44 (477)
Q Consensus 6 ~~~il~~~~-~~~GHv~p--~l~La~~L~~rGH~V-t~~~~~~ 44 (477)
.||++|+-. +.+|+-.. .+.+|+++.+.||+| .++-..+
T Consensus 12 ~~~~~ivv~~~Pyg~~~a~~Al~~A~aala~g~eV~~VFf~~D 54 (140)
T 2d1p_A 12 SMRFAIVVTGPAYGTQQASSAFQFAQALIADGHELSSVFFYRE 54 (140)
T ss_dssp CCEEEEEECSCSSSSSHHHHHHHHHHHHHHTTCEEEEEEECGG
T ss_pred ceEEEEEEcCCCCCcHHHHHHHHHHHHHHHCCCccCEEEEech
Confidence 578866655 56776655 466799999999999 7776644
No 135
>1mio_B Nitrogenase molybdenum iron protein (beta chain); HET: HCA CFM CLP; 3.00A {Clostridium pasteurianum} SCOP: c.92.2.3
Probab=40.30 E-value=77 Score=30.76 Aligned_cols=36 Identities=25% Similarity=0.313 Sum_probs=28.6
Q ss_pred HHHHHHHHhcCCCCCeEEEECCCcchHHHHHHHcCCCeEEE
Q 011792 97 KLAFRQLLMTPGRLPTCIISDSIMSFAIDVAEELNIPIITF 137 (477)
Q Consensus 97 ~~~l~~~l~~~~~~~D~vI~D~~~~~~~~~A~~lgiP~v~~ 137 (477)
...+.+++++. +||++|.+.. ...+|+++|||++.+
T Consensus 374 ~~~l~~~i~~~--~pDl~ig~~~---~~~~a~k~gip~~~~ 409 (458)
T 1mio_B 374 FFDVHQWIKNE--GVDLLISNTY---GKFIAREENIPFVRF 409 (458)
T ss_dssp HHHHHHHHHHS--CCSEEEESGG---GHHHHHHHTCCEEEC
T ss_pred HHHHHHHHHhc--CCCEEEeCcc---hHHHHHHcCCCEEEe
Confidence 34567777766 9999998873 577899999999985
No 136
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=40.02 E-value=23 Score=32.73 Aligned_cols=33 Identities=21% Similarity=0.312 Sum_probs=28.1
Q ss_pred CCEEEEEcCCCCCCHHHHHHHHHHHHhCCCeEEEEeC
Q 011792 6 VPHVVLLPFPAYGHIKPMLSLAKLFSHAGFRITFVNT 42 (477)
Q Consensus 6 ~~~il~~~~~~~GHv~p~l~La~~L~~rGH~Vt~~~~ 42 (477)
.+||.|+-.++.| |..+|+.|.++||+|+..=.
T Consensus 4 ~~~i~~iGiGg~G----ms~~A~~L~~~G~~V~~~D~ 36 (326)
T 3eag_A 4 MKHIHIIGIGGTF----MGGLAAIAKEAGFEVSGCDA 36 (326)
T ss_dssp CCEEEEESCCSHH----HHHHHHHHHHTTCEEEEEES
T ss_pred CcEEEEEEECHHH----HHHHHHHHHhCCCEEEEEcC
Confidence 4689999999876 67899999999999998643
No 137
>2r85_A PURP protein PF1517; ATP-grAsp superfamily, unknown function; HET: AMP; 1.70A {Pyrococcus furiosus} SCOP: c.30.1.8 d.142.1.9 PDB: 2r84_A* 2r86_A* 2r87_A*
Probab=39.68 E-value=26 Score=32.15 Aligned_cols=33 Identities=12% Similarity=0.127 Sum_probs=27.5
Q ss_pred CCEEEEEcCCCCCCHHHHHHHHHHHHhCCCeEEEEeCCc
Q 011792 6 VPHVVLLPFPAYGHIKPMLSLAKLFSHAGFRITFVNTDQ 44 (477)
Q Consensus 6 ~~~il~~~~~~~GHv~p~l~La~~L~~rGH~Vt~~~~~~ 44 (477)
+|+|+++..+ ....+++++.++||+|.++.+..
T Consensus 2 ~m~Ililg~g------~~~~l~~a~~~~G~~v~~~~~~~ 34 (334)
T 2r85_A 2 KVRIATYASH------SALQILKGAKDEGFETIAFGSSK 34 (334)
T ss_dssp CSEEEEESST------THHHHHHHHHHTTCCEEEESCGG
T ss_pred ceEEEEECCh------hHHHHHHHHHhCCCEEEEEECCC
Confidence 4799998876 56789999999999999987743
No 138
>3lrx_A Putative hydrogenase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.60A {Pyrococcus furiosus}
Probab=39.10 E-value=25 Score=28.51 Aligned_cols=36 Identities=17% Similarity=0.283 Sum_probs=28.7
Q ss_pred CEEEEEcCCCCCCHHHHHHHHHHHHhCCCeEEEEeCCcc
Q 011792 7 PHVVLLPFPAYGHIKPMLSLAKLFSHAGFRITFVNTDQY 45 (477)
Q Consensus 7 ~~il~~~~~~~GHv~p~l~La~~L~~rGH~Vt~~~~~~~ 45 (477)
.+++++..|. | +-|++.+++.|.++|.+|+++ ....
T Consensus 24 ~~~llIaGG~-G-ItPl~sm~~~l~~~~~~v~l~-g~r~ 59 (158)
T 3lrx_A 24 GKILAIGAYT-G-IVEVYPIAKAWQEIGNDVTTL-HVTF 59 (158)
T ss_dssp SEEEEEEETT-H-HHHHHHHHHHHHHHTCEEEEE-EECB
T ss_pred CeEEEEEccC-c-HHHHHHHHHHHHhcCCcEEEE-EeCC
Confidence 4677776655 3 999999999999999999999 6443
No 139
>1wrd_A TOM1, target of MYB protein 1; three-helix bundle, ubiquitin-binding protein, protein trans signaling protein complex; 1.75A {Homo sapiens} SCOP: a.7.8.1
Probab=39.10 E-value=48 Score=24.67 Aligned_cols=31 Identities=16% Similarity=0.243 Sum_probs=22.6
Q ss_pred CCCHHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHHH
Q 011792 417 TCDRSTIEKLVRDLMDNKRDKIMESTVQIAKMARDA 452 (477)
Q Consensus 417 ~~~~~~l~~~v~~ll~~~~~~~~~~a~~l~~~~~~~ 452 (477)
.++++.+.+...+| ...+.+++-|.+++.++
T Consensus 2 ~~~~eq~~k~~~el-----~~v~~n~~lL~EML~~~ 32 (103)
T 1wrd_A 2 PLGSEQIGKLRSEL-----EMVSGNVRVMSEMLTEL 32 (103)
T ss_dssp CSSSTTHHHHHHHH-----HHHHHHHHHHHHHHHHS
T ss_pred CCCHHHHHHHHHHH-----HHHHHHHHHHHHHHHhc
Confidence 45677777777777 67778888888887764
No 140
>3db2_A Putative NADPH-dependent oxidoreductase; two domain protein, rossman fold, putative dehydrogenase, ST genomics; 1.70A {Desulfitobacterium hafniense dcb-2}
Probab=38.64 E-value=75 Score=29.44 Aligned_cols=124 Identities=10% Similarity=0.042 Sum_probs=63.6
Q ss_pred cEEEEEecCcccCCHHHHHHHHHHHHhC-CCcEEEEEecCCcCCCCCCCCCchhhHhhhcCCCceeeccCHHHHHhcccc
Q 011792 288 SVLYVSFGSFIKLSGDQILEFWHGIVNS-GKGFLWVIRSDLIDGESGVGPVPAELDQGTKERGCIVSWAPQEEVLAHQAI 366 (477)
Q Consensus 288 ~~v~vs~Gs~~~~~~~~~~~~~~a~~~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~~p~~~ll~~~~~ 366 (477)
.+.+|.+|.+. ..++.++... +..++.+...+. .....+.++. ++. .+-...+++..+++
T Consensus 7 ~vgiiG~G~~g-------~~~~~~l~~~~~~~lvav~d~~~--------~~~~~~~~~~--g~~--~~~~~~~~l~~~~~ 67 (354)
T 3db2_A 7 GVAAIGLGRWA-------YVMADAYTKSEKLKLVTCYSRTE--------DKREKFGKRY--NCA--GDATMEALLAREDV 67 (354)
T ss_dssp EEEEECCSHHH-------HHHHHHHTTCSSEEEEEEECSSH--------HHHHHHHHHH--TCC--CCSSHHHHHHCSSC
T ss_pred eEEEEccCHHH-------HHHHHHHHhCCCcEEEEEECCCH--------HHHHHHHHHc--CCC--CcCCHHHHhcCCCC
Confidence 46778888765 3466777665 445555552210 0001111111 222 25567888866555
Q ss_pred cccccccC----chhHHHHhhcCCceec-CCccc--hhhhhHHHHhhhhceeeecc--CCCCHHHHHHHHHHHHh
Q 011792 367 GGFLTHSG----WNSTLESMVAGVPMIC-WPQVG--DQQVNSRCVSEIWKIGFDMK--DTCDRSTIEKLVRDLMD 432 (477)
Q Consensus 367 ~~~I~HGG----~gs~~eal~~GvP~l~-~P~~~--DQ~~na~rv~~~~G~G~~l~--~~~~~~~l~~~v~~ll~ 432 (477)
++++---- .-.+.+++.+|+++++ -|+.. ++-.-...++++.|+-+... ..+++ ....+++++.
T Consensus 68 D~V~i~tp~~~h~~~~~~al~~gk~vl~EKP~~~~~~~~~~l~~~a~~~~~~~~v~~~~R~~p--~~~~~k~~i~ 140 (354)
T 3db2_A 68 EMVIITVPNDKHAEVIEQCARSGKHIYVEKPISVSLDHAQRIDQVIKETGVKFLCGHSSRRLG--ALRKMKEMID 140 (354)
T ss_dssp CEEEECSCTTSHHHHHHHHHHTTCEEEEESSSCSSHHHHHHHHHHHHHHCCCEEEECGGGGSH--HHHHHHHHHH
T ss_pred CEEEEeCChHHHHHHHHHHHHcCCEEEEccCCCCCHHHHHHHHHHHHHcCCeEEEeechhcCH--HHHHHHHHHh
Confidence 55663322 2456778999999876 36543 34333333445556655554 23443 2334444444
No 141
>3evn_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics; 2.00A {Streptococcus agalactiae serogroup V}
Probab=38.24 E-value=2.1e+02 Score=25.93 Aligned_cols=78 Identities=14% Similarity=0.155 Sum_probs=43.5
Q ss_pred eccCHHHHHhcccccccccccCc----hhHHHHhhcCCceec-CCccc--hhhhhHHHHhhhhceeeecc--CCCCHHHH
Q 011792 353 SWAPQEEVLAHQAIGGFLTHSGW----NSTLESMVAGVPMIC-WPQVG--DQQVNSRCVSEIWKIGFDMK--DTCDRSTI 423 (477)
Q Consensus 353 ~~~p~~~ll~~~~~~~~I~HGG~----gs~~eal~~GvP~l~-~P~~~--DQ~~na~rv~~~~G~G~~l~--~~~~~~~l 423 (477)
.+-...++|..+++++|+----. -.+.+++.+|+++++ -|+.. ++-.-...++++.|+-+... ..+.+.
T Consensus 55 ~~~~~~~ll~~~~~D~V~i~tp~~~h~~~~~~al~aGk~Vl~EKP~a~~~~e~~~l~~~a~~~~~~~~v~~~~r~~p~-- 132 (329)
T 3evn_A 55 AYDKLEDMLADESIDVIYVATINQDHYKVAKAALLAGKHVLVEKPFTLTYDQANELFALAESCNLFLMEAQKSVFIPM-- 132 (329)
T ss_dssp EESCHHHHHTCTTCCEEEECSCGGGHHHHHHHHHHTTCEEEEESSCCSSHHHHHHHHHHHHHTTCCEEEECSSCSSHH--
T ss_pred ccCCHHHHhcCCCCCEEEECCCcHHHHHHHHHHHHCCCeEEEccCCcCCHHHHHHHHHHHHHcCCEEEEEEcccCCHH--
Confidence 34567888886666556643332 346788999999886 36543 33333334445556655443 244442
Q ss_pred HHHHHHHHh
Q 011792 424 EKLVRDLMD 432 (477)
Q Consensus 424 ~~~v~~ll~ 432 (477)
...+++++.
T Consensus 133 ~~~~~~~i~ 141 (329)
T 3evn_A 133 TQVIKKLLA 141 (329)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHh
Confidence 334444444
No 142
>2iz6_A Molybdenum cofactor carrier protein; metal transport; 1.60A {Chlamydomonas reinhardtii} PDB: 2iz5_A 2iz7_A
Probab=37.50 E-value=44 Score=27.72 Aligned_cols=55 Identities=13% Similarity=0.079 Sum_probs=0.0
Q ss_pred cCchhHHHH---hhcCCceecCCccchhhhhHHHHhhhhceeeeccCCCCHHHHHHHHHHHHh
Q 011792 373 SGWNSTLES---MVAGVPMICWPQVGDQQVNSRCVSEIWKIGFDMKDTCDRSTIEKLVRDLMD 432 (477)
Q Consensus 373 GG~gs~~ea---l~~GvP~l~~P~~~DQ~~na~rv~~~~G~G~~l~~~~~~~~l~~~v~~ll~ 432 (477)
||.||+-|+ +.+++|++++|.+. .....+.++.--.+.... |++++.+.+.+.++
T Consensus 116 Gg~GTL~E~~~al~~~kpV~~l~~~~---~~~gfi~~~~~~~i~~~~--~~~e~~~~l~~~~~ 173 (176)
T 2iz6_A 116 MGPGTAAEVALALKAKKPVVLLGTQP---EAEKFFTSLDAGLVHVAA--DVAGAIAAVKQLLA 173 (176)
T ss_dssp CCHHHHHHHHHHHHTTCCEEEESCCH---HHHHHHHHHCTTTEEEES--SHHHHHHHHHHHHH
T ss_pred CCccHHHHHHHHHHhCCcEEEEcCcc---cccccCChhhcCeEEEcC--CHHHHHHHHHHHHH
No 143
>3ga2_A Endonuclease V; alpha-beta protein, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.10A {Bacillus subtilis}
Probab=37.23 E-value=34 Score=30.03 Aligned_cols=41 Identities=17% Similarity=0.007 Sum_probs=30.7
Q ss_pred HHHHHHHHhcCCCCCeEEEECCCcc-------hHHHHHHHcCCCeEEE
Q 011792 97 KLAFRQLLMTPGRLPTCIISDSIMS-------FAIDVAEELNIPIITF 137 (477)
Q Consensus 97 ~~~l~~~l~~~~~~~D~vI~D~~~~-------~~~~~A~~lgiP~v~~ 137 (477)
.+.+.++++....+||+|++|..-. -|..+.-.+|+|+|.+
T Consensus 96 ~P~ll~al~~L~~~PdlllvDG~GiaHPRr~GlAsHlGv~l~~PtIGV 143 (246)
T 3ga2_A 96 LPLIIEAAKKLETEPDVFLFDGNGYLHYNHMGVATHAAFFLGKPTIGI 143 (246)
T ss_dssp HHHHHHHHHHCSSCCSCEEEEBCSSSSTTSCCHHHHHHHHHTSCEEEE
T ss_pred HHHHHHHHHhcCCCCCEEEEcCcEEecCCCcchhheeeeecCCCEEee
Confidence 3555566666555899999998766 3667778888999986
No 144
>3to5_A CHEY homolog; alpha(5)beta(5), chemotaxis, FLIM, phosphorylation, motor AC signaling protein; 1.65A {Vibrio cholerae}
Probab=36.84 E-value=40 Score=26.38 Aligned_cols=33 Identities=15% Similarity=0.309 Sum_probs=25.4
Q ss_pred CCeEEEECCCcc--hHHHHHHHc-------CCCeEEEccCch
Q 011792 110 LPTCIISDSIMS--FAIDVAEEL-------NIPIITFRPYSA 142 (477)
Q Consensus 110 ~~D~vI~D~~~~--~~~~~A~~l-------giP~v~~~~~~~ 142 (477)
+||+||.|...+ .|..+++.+ ++|+|.++....
T Consensus 57 ~~DlillD~~MP~mdG~el~~~ir~~~~~~~ipvI~lTa~~~ 98 (134)
T 3to5_A 57 DFDFVVTDWNMPGMQGIDLLKNIRADEELKHLPVLMITAEAK 98 (134)
T ss_dssp CCSEEEEESCCSSSCHHHHHHHHHHSTTTTTCCEEEEESSCC
T ss_pred CCCEEEEcCCCCCCCHHHHHHHHHhCCCCCCCeEEEEECCCC
Confidence 899999999888 566666654 589888766544
No 145
>3kcn_A Adenylate cyclase homolog; SGX, PSI 2, structural genomics, protein structure initiative; 2.45A {Rhodopirellula baltica}
Probab=36.72 E-value=95 Score=23.98 Aligned_cols=64 Identities=9% Similarity=0.039 Sum_probs=38.8
Q ss_pred hcCCceecCCccchhhhhHHHHhhhhc-eeeeccCCCCHHHHHHHHHHHHhHhHHHH-HHHHHHHHHHHH
Q 011792 383 VAGVPMICWPQVGDQQVNSRCVSEIWK-IGFDMKDTCDRSTIEKLVRDLMDNKRDKI-MESTVQIAKMAR 450 (477)
Q Consensus 383 ~~GvP~l~~P~~~DQ~~na~rv~~~~G-~G~~l~~~~~~~~l~~~v~~ll~~~~~~~-~~~a~~l~~~~~ 450 (477)
...+|+|++--..|.......+ + .| +--.+.+.++.++|.++|+.++.. ..+ ++..+.+...+.
T Consensus 74 ~~~~~ii~~s~~~~~~~~~~~~-~-~g~~~~~l~KP~~~~~L~~~i~~~l~~--~~~~~~~~~~~~~~~~ 139 (151)
T 3kcn_A 74 SPNSVYLMLTGNQDLTTAMEAV-N-EGQVFRFLNKPCQMSDIKAAINAGIKQ--YDLVTSKEELLKKTFA 139 (151)
T ss_dssp CSSCEEEEEECGGGHHHHHHHH-H-HTCCSEEEESSCCHHHHHHHHHHHHHH--HHHHHHHHHHHHHC--
T ss_pred CCCcEEEEEECCCCHHHHHHHH-H-cCCeeEEEcCCCCHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHh
Confidence 3467777775555544444433 3 57 544555889999999999999985 333 334444444443
No 146
>3kxe_C Antitoxin protein PARD-1; complex, TA system, protein binding; 2.60A {Caulobacter crescentus NA1000}
Probab=36.68 E-value=48 Score=23.87 Aligned_cols=52 Identities=13% Similarity=0.086 Sum_probs=33.2
Q ss_pred CHHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHhhh
Q 011792 419 DRSTIEKLVRDLMDNKRDKIMESTVQIAKMARDAVKEGGSSYRNLEKLIEDIRLMAF 475 (477)
Q Consensus 419 ~~~~l~~~v~~ll~~~~~~~~~~a~~l~~~~~~~~~~gg~~~~~~~~~i~~~~~~~~ 475 (477)
.++.|+++|+.+-.. ..+...+...+....+.|.+.....++++.++.....
T Consensus 30 ~SEviR~~lR~l~~r-----e~~l~~Lr~~l~~G~~Sg~~~~~d~d~v~a~~~~~~~ 81 (88)
T 3kxe_C 30 ASEVIRAGLRLLEEN-----EAKLAALRAALIEGEESGFIEDFDFDAFIEERSRASA 81 (88)
T ss_dssp HHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHTCEESSCCHHHHHHHHHHC--
T ss_pred HHHHHHHHHHHHHHH-----hHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHh
Confidence 457777777766542 2345667777777666665443568888888876554
No 147
>4eg0_A D-alanine--D-alanine ligase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.65A {Burkholderia ambifaria} PDB: 4egq_A 4egj_A
Probab=36.32 E-value=54 Score=29.82 Aligned_cols=38 Identities=11% Similarity=-0.005 Sum_probs=29.9
Q ss_pred CCEEEEEcCCCCCC----HHHHHHHHHHHHhCCCeEEEEeCC
Q 011792 6 VPHVVLLPFPAYGH----IKPMLSLAKLFSHAGFRITFVNTD 43 (477)
Q Consensus 6 ~~~il~~~~~~~GH----v~p~l~La~~L~~rGH~Vt~~~~~ 43 (477)
++||+++..|-.+- +..-..++++|.++||+|+.+.+.
T Consensus 13 ~~~v~vl~gg~s~E~~vsl~s~~~v~~al~~~g~~v~~i~~~ 54 (317)
T 4eg0_A 13 FGKVAVLFGGESAEREVSLTSGRLVLQGLRDAGIDAHPFDPA 54 (317)
T ss_dssp GCEEEEECCCSSTTHHHHHHHHHHHHHHHHHTTCEEEEECTT
T ss_pred cceEEEEECCCCCcceeeHHHHHHHHHHHHHCCCEEEEEeCC
Confidence 68899888765432 346789999999999999999753
No 148
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=36.13 E-value=38 Score=31.05 Aligned_cols=32 Identities=22% Similarity=0.428 Sum_probs=26.0
Q ss_pred CCEEEEEcCCCCCCHHHHHHHHHHHHhCCCeEEEEeC
Q 011792 6 VPHVVLLPFPAYGHIKPMLSLAKLFSHAGFRITFVNT 42 (477)
Q Consensus 6 ~~~il~~~~~~~GHv~p~l~La~~L~~rGH~Vt~~~~ 42 (477)
.|+|.|+-.|.-| ..+|+.|+++||+|+++..
T Consensus 31 ~~~I~iIG~G~mG-----~~~a~~l~~~G~~V~~~dr 62 (320)
T 4dll_A 31 ARKITFLGTGSMG-----LPMARRLCEAGYALQVWNR 62 (320)
T ss_dssp CSEEEEECCTTTH-----HHHHHHHHHTTCEEEEECS
T ss_pred CCEEEEECccHHH-----HHHHHHHHhCCCeEEEEcC
Confidence 4799999766655 6789999999999998754
No 149
>3n7t_A Macrophage binding protein; seattle structural genomics center for infectious disease, S macrophage, pathogenic fungus, coccidioidomycosis; 2.10A {Coccidioides immitis} SCOP: c.23.16.0
Probab=35.97 E-value=78 Score=27.77 Aligned_cols=37 Identities=19% Similarity=0.229 Sum_probs=27.8
Q ss_pred CEEEEEcCCCC----------CC-HHHHHHHHHHHHhCCCeEEEEeCC
Q 011792 7 PHVVLLPFPAY----------GH-IKPMLSLAKLFSHAGFRITFVNTD 43 (477)
Q Consensus 7 ~~il~~~~~~~----------GH-v~p~l~La~~L~~rGH~Vt~~~~~ 43 (477)
+||+++..... |- ..=++.-...|.+.|++|+++++.
T Consensus 10 kkvlvvlt~~~~~~~~~g~~tG~~~~E~~~p~~~l~~aG~~V~~aSp~ 57 (247)
T 3n7t_A 10 RKALLAITSAHPPFWPDGKRTGLFFSEALHPFNELTAAGFEVDVASET 57 (247)
T ss_dssp SEEEEECCCCCCBCSTTSCBCCBCHHHHHHHHHHHHHTTCEEEEEESS
T ss_pred CeEEEEECCCCcccCCCCCCCcccHHHHHHHHHHHHHCCCEEEEEeCC
Confidence 58888877642 22 344777788999999999999974
No 150
>3ors_A N5-carboxyaminoimidazole ribonucleotide mutase; isomerase, isomerase,biosynthetic protein; 1.45A {Staphylococcus aureus subsp}
Probab=35.48 E-value=1.8e+02 Score=23.62 Aligned_cols=136 Identities=15% Similarity=0.082 Sum_probs=75.9
Q ss_pred cEEEEEecCcccCCHHHHHHHHHHHHhCCCcEEEEEecCCcCCCCCCCCCchhhHhhhcCCCceeeccCHHHHHh---cc
Q 011792 288 SVLYVSFGSFIKLSGDQILEFWHGIVNSGKGFLWVIRSDLIDGESGVGPVPAELDQGTKERGCIVSWAPQEEVLA---HQ 364 (477)
Q Consensus 288 ~~v~vs~Gs~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~~p~~~ll~---~~ 364 (477)
+.|-|-+||.. +....+.....++.++..+=+.+.+ .+..|+.+.+ +.. ..
T Consensus 4 ~~V~Iimgs~S--D~~v~~~a~~~l~~~gi~~ev~V~S--------aHR~p~~~~~----------------~~~~a~~~ 57 (163)
T 3ors_A 4 MKVAVIMGSSS--DWKIMQESCNMLDYFEIPYEKQVVS--------AHRTPKMMVQ----------------FASEARER 57 (163)
T ss_dssp CCEEEEESCGG--GHHHHHHHHHHHHHTTCCEEEEECC--------TTTSHHHHHH----------------HHHHTTTT
T ss_pred CeEEEEECcHH--HHHHHHHHHHHHHHcCCCEEEEEEC--------CcCCHHHHHH----------------HHHHHHhC
Confidence 44666677764 6777888888899999887666632 2344543321 111 11
Q ss_pred cccccccccCch----hHHHHhhcCCceecCCccchhh--hhH--HHHhhhhceeeec---c--CCCCHHHHHHHHHHHH
Q 011792 365 AIGGFLTHSGWN----STLESMVAGVPMICWPQVGDQQ--VNS--RCVSEIWKIGFDM---K--DTCDRSTIEKLVRDLM 431 (477)
Q Consensus 365 ~~~~~I~HGG~g----s~~eal~~GvP~l~~P~~~DQ~--~na--~rv~~~~G~G~~l---~--~~~~~~~l~~~v~~ll 431 (477)
.++++|.=.|.. ++..++ .-+|+|.+|...... ..+ ..+.---|+.+.. + +.+++..++..|..+-
T Consensus 58 g~~ViIa~AG~aa~LpgvvA~~-t~~PVIgVP~~~~~l~G~dsLlS~vqmp~GvPVatV~I~~a~~~nAa~lAa~Il~~~ 136 (163)
T 3ors_A 58 GINIIIAGAGGAAHLPGMVASL-TTLPVIGVPIETKSLKGIDSLLSIVQMPGGIPVATTAIGAAGAKNAGILAARMLSIQ 136 (163)
T ss_dssp TCCEEEEEEESSCCHHHHHHHH-CSSCEEEEEECCTTTTTHHHHHHHHTCCTTSCCEECCSTHHHHHHHHHHHHHHHHTT
T ss_pred CCcEEEEECCchhhhHHHHHhc-cCCCEEEeeCCCCCCCCHHHHHHHhhCCCCCceEEEEcCCcccHHHHHHHHHHHhCC
Confidence 234488777753 444443 568999999754311 111 1121112542222 1 2344445554444332
Q ss_pred hHhHHHHHHHHHHHHHHHHHHH
Q 011792 432 DNKRDKIMESTVQIAKMARDAV 453 (477)
Q Consensus 432 ~~~~~~~~~~a~~l~~~~~~~~ 453 (477)
| +.++++.+.+++.+++.+
T Consensus 137 -d--~~l~~kl~~~r~~~~~~v 155 (163)
T 3ors_A 137 -N--PSLVEKLNQYESSLIQKV 155 (163)
T ss_dssp -C--THHHHHHHHHHHHHHHHH
T ss_pred -C--HHHHHHHHHHHHHHHHHH
Confidence 4 788999988888887653
No 151
>3gl9_A Response regulator; beta-sheet, surrounded by alpha helices, BOTH sides, signaling protein; HET: BFD; 1.80A {Thermotoga maritima} SCOP: c.23.1.0 PDB: 3dgf_C 3dge_C
Probab=35.18 E-value=66 Score=23.89 Aligned_cols=33 Identities=24% Similarity=0.417 Sum_probs=23.5
Q ss_pred CCeEEEECCCcc--hHHHHHHHc-------CCCeEEEccCch
Q 011792 110 LPTCIISDSIMS--FAIDVAEEL-------NIPIITFRPYSA 142 (477)
Q Consensus 110 ~~D~vI~D~~~~--~~~~~A~~l-------giP~v~~~~~~~ 142 (477)
+||+||.|...+ .+..+++.+ ++|++.++....
T Consensus 46 ~~dlvllD~~~p~~~g~~~~~~l~~~~~~~~~pii~~s~~~~ 87 (122)
T 3gl9_A 46 TPDLIVLXIMMPVMDGFTVLKKLQEKEEWKRIPVIVLTAKGG 87 (122)
T ss_dssp CCSEEEECSCCSSSCHHHHHHHHHTSTTTTTSCEEEEESCCS
T ss_pred CCCEEEEeccCCCCcHHHHHHHHHhcccccCCCEEEEecCCc
Confidence 899999998766 455555543 588888766443
No 152
>1o4v_A Phosphoribosylaminoimidazole mutase PURE; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; 1.77A {Thermotoga maritima} SCOP: c.23.8.1
Probab=34.81 E-value=1.9e+02 Score=23.87 Aligned_cols=137 Identities=12% Similarity=0.112 Sum_probs=80.1
Q ss_pred CCcEEEEEecCcccCCHHHHHHHHHHHHhCCCcEEEEEecCCcCCCCCCCCCchhhHhhhcCCCceeeccCHHHHHhc--
Q 011792 286 SRSVLYVSFGSFIKLSGDQILEFWHGIVNSGKGFLWVIRSDLIDGESGVGPVPAELDQGTKERGCIVSWAPQEEVLAH-- 363 (477)
Q Consensus 286 ~~~~v~vs~Gs~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~~p~~~ll~~-- 363 (477)
.-|.|-|-+||.. +-...+.....++.++..+=+.+.+ .+..|+.+.+ +...
T Consensus 12 ~~~~V~IimGS~S--D~~v~~~a~~~L~~~Gi~~dv~V~S--------aHR~p~~l~~----------------~~~~a~ 65 (183)
T 1o4v_A 12 HVPRVGIIMGSDS--DLPVMKQAAEILEEFGIDYEITIVS--------AHRTPDRMFE----------------YAKNAE 65 (183)
T ss_dssp --CEEEEEESCGG--GHHHHHHHHHHHHHTTCEEEEEECC--------TTTCHHHHHH----------------HHHHTT
T ss_pred CCCeEEEEeccHH--HHHHHHHHHHHHHHcCCCeEEEEEc--------ccCCHHHHHH----------------HHHHHH
Confidence 4477888888874 7777888889999999987666632 2344543321 2211
Q ss_pred -ccccccccccCch----hHHHHhhcCCceecCCccch--hhhhH--HHHhhhh--ceeeec---cCCCCHHHHHHHHHH
Q 011792 364 -QAIGGFLTHSGWN----STLESMVAGVPMICWPQVGD--QQVNS--RCVSEIW--KIGFDM---KDTCDRSTIEKLVRD 429 (477)
Q Consensus 364 -~~~~~~I~HGG~g----s~~eal~~GvP~l~~P~~~D--Q~~na--~rv~~~~--G~G~~l---~~~~~~~~l~~~v~~ 429 (477)
..++++|.=.|.. ++..++ .-+|+|.+|.... .-..+ ..+ + . |+.+.. ++.+++.-++..|..
T Consensus 66 ~~g~~ViIa~AG~aa~LpgvvA~~-t~~PVIgVP~~~~~l~G~dsLlSiv-q-mP~GvpVatV~Id~~~nAa~lAaqIla 142 (183)
T 1o4v_A 66 ERGIEVIIAGAGGAAHLPGMVASI-THLPVIGVPVKTSTLNGLDSLFSIV-Q-MPGGVPVATVAINNAKNAGILAASILG 142 (183)
T ss_dssp TTTCCEEEEEEESSCCHHHHHHHH-CSSCEEEEEECCTTTTTHHHHHHHH-T-CCTTCCCEECCTTCHHHHHHHHHHHHH
T ss_pred hCCCcEEEEecCcccccHHHHHhc-cCCCEEEeeCCCCCCCcHHHHHHHh-c-CCCCCeeEEEecCCchHHHHHHHHHHh
Confidence 1233477776653 444444 6789999998542 11222 122 2 3 543222 234555556555543
Q ss_pred HHhHhHHHHHHHHHHHHHHHHHHHH
Q 011792 430 LMDNKRDKIMESTVQIAKMARDAVK 454 (477)
Q Consensus 430 ll~~~~~~~~~~a~~l~~~~~~~~~ 454 (477)
+ .| +.++++.+.++..+++.+.
T Consensus 143 ~-~d--~~l~~kL~~~r~~~~~~v~ 164 (183)
T 1o4v_A 143 I-KY--PEIARKVKEYKERMKREVL 164 (183)
T ss_dssp T-TC--HHHHHHHHHHHHHHHHHHH
T ss_pred c-CC--HHHHHHHHHHHHHHHHHHH
Confidence 2 35 7888888888888877533
No 153
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*
Probab=34.75 E-value=2.6e+02 Score=26.97 Aligned_cols=152 Identities=8% Similarity=-0.004 Sum_probs=74.9
Q ss_pred cccCCCCCcEEEEEecCcccCCHHHHHHHHHHHHhCCCcEEEEEecCCcCCCCCCCCCchhhHhhh-cCCCceeeccCHH
Q 011792 280 WLGSQPSRSVLYVSFGSFIKLSGDQILEFWHGIVNSGKGFLWVIRSDLIDGESGVGPVPAELDQGT-KERGCIVSWAPQE 358 (477)
Q Consensus 280 ~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~-~~nv~~~~~~p~~ 358 (477)
|++- .++.++.+..|... ..-++.+.+.|..+.+.-. ...+.+.+-. ..++.+..---+.
T Consensus 7 ~~~l-~~~~vlVvGgG~va-------~~k~~~L~~~ga~V~vi~~-----------~~~~~~~~l~~~~~i~~~~~~~~~ 67 (457)
T 1pjq_A 7 FCQL-RDRDCLIVGGGDVA-------ERKARLLLEAGARLTVNAL-----------TFIPQFTVWANEGMLTLVEGPFDE 67 (457)
T ss_dssp EECC-BTCEEEEECCSHHH-------HHHHHHHHHTTBEEEEEES-----------SCCHHHHHHHTTTSCEEEESSCCG
T ss_pred EEEC-CCCEEEEECCCHHH-------HHHHHHHHhCcCEEEEEcC-----------CCCHHHHHHHhcCCEEEEECCCCc
Confidence 4553 36678888887765 3445566667887665552 2222222211 1345443221222
Q ss_pred HHHhcccccccccccCchh-----HHHHhhcCCce--ecCCccchhhhhHHHHhhhhceeeecc-CCCC-HHHHHHHHHH
Q 011792 359 EVLAHQAIGGFLTHSGWNS-----TLESMVAGVPM--ICWPQVGDQQVNSRCVSEIWKIGFDMK-DTCD-RSTIEKLVRD 429 (477)
Q Consensus 359 ~ll~~~~~~~~I~HGG~gs-----~~eal~~GvP~--l~~P~~~DQ~~na~rv~~~~G~G~~l~-~~~~-~~~l~~~v~~ 429 (477)
..|..+++ +|.--|.-. ..+|-..|+|+ +--|-..|...-|..-...+-+|+.-. ++.+ +..|++.|..
T Consensus 68 ~~l~~~~l--Vi~at~~~~~n~~i~~~a~~~~i~vn~~d~~e~~~~~~pa~~~~~~l~iaIsT~Gksp~la~~ir~~ie~ 145 (457)
T 1pjq_A 68 TLLDSCWL--AIAATDDDTVNQRVSDAAESRRIFCNVVDAPKAASFIMPSIIDRSPLMVAVSSGGTSPVLARLLREKLES 145 (457)
T ss_dssp GGGTTCSE--EEECCSCHHHHHHHHHHHHHTTCEEEETTCTTSSSEECCEEEEETTEEEEEECTTSCHHHHHHHHHHHHH
T ss_pred cccCCccE--EEEcCCCHHHHHHHHHHHHHcCCEEEECCCcccCceEeeeEEEeCCeEEEEECCCCChHHHHHHHHHHHH
Confidence 33445555 777777653 44566679997 333322332211100001134555522 2222 5677777777
Q ss_pred HHhHhHHHHHHHHHHHHHHHHHH
Q 011792 430 LMDNKRDKIMESTVQIAKMARDA 452 (477)
Q Consensus 430 ll~~~~~~~~~~a~~l~~~~~~~ 452 (477)
+|.+.-..+.+.+.++++.+++.
T Consensus 146 ~l~~~~~~~~~~~~~~R~~~~~~ 168 (457)
T 1pjq_A 146 LLPQHLGQVARYAGQLRARVKKQ 168 (457)
T ss_dssp HSCTTHHHHHHHHHHHHHHHHHH
T ss_pred hcchhHHHHHHHHHHHHHHHHhh
Confidence 77532234555555555555543
No 154
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=34.66 E-value=33 Score=27.37 Aligned_cols=33 Identities=21% Similarity=0.385 Sum_probs=25.0
Q ss_pred CCEEEEEcCCCCCCHHHHHHHHHHHHhCCCeEEEEeCC
Q 011792 6 VPHVVLLPFPAYGHIKPMLSLAKLFSHAGFRITFVNTD 43 (477)
Q Consensus 6 ~~~il~~~~~~~GHv~p~l~La~~L~~rGH~Vt~~~~~ 43 (477)
.++|+++-. |.+- ..+++.|.++|++|+++...
T Consensus 19 ~~~v~IiG~---G~iG--~~la~~L~~~g~~V~vid~~ 51 (155)
T 2g1u_A 19 SKYIVIFGC---GRLG--SLIANLASSSGHSVVVVDKN 51 (155)
T ss_dssp CCEEEEECC---SHHH--HHHHHHHHHTTCEEEEEESC
T ss_pred CCcEEEECC---CHHH--HHHHHHHHhCCCeEEEEECC
Confidence 478888843 5443 55789999999999998763
No 155
>2qs7_A Uncharacterized protein; putative oxidoreductase of the DSRE/DSRF-like family, struct genomics, joint center for structural genomics; HET: MSE EPE; 2.09A {Sulfolobus solfataricus P2}
Probab=33.10 E-value=57 Score=25.87 Aligned_cols=40 Identities=13% Similarity=0.156 Sum_probs=30.2
Q ss_pred CEEEEEcC-CCCCCHHHHHHHHHHHHhCCCeEEEEeCCccc
Q 011792 7 PHVVLLPF-PAYGHIKPMLSLAKLFSHAGFRITFVNTDQYH 46 (477)
Q Consensus 7 ~~il~~~~-~~~GHv~p~l~La~~L~~rGH~Vt~~~~~~~~ 46 (477)
.+++|+.. +..-.+.+.+.+|...+..|++|+++.+..-.
T Consensus 8 ~kl~II~~sg~~d~~~~a~~lA~~Aaa~g~eV~iF~t~~gv 48 (144)
T 2qs7_A 8 KKLSIIVFSGTIDKLMPVGILTSGAAASGYEVNLFFTFWGL 48 (144)
T ss_dssp CEEEEEECCCSHHHHHHHHHHHHHHHHTTCEEEEEECHHHH
T ss_pred CCEEEEEEcCCHHHHHHHHHHHHHHHHcCCcEEEEEehHHH
Confidence 35555544 55577788999999999999999999984433
No 156
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=32.75 E-value=23 Score=27.77 Aligned_cols=33 Identities=12% Similarity=0.196 Sum_probs=25.8
Q ss_pred CCEEEEEcCCCCCCHHHHHHHHHHHHhCCCeEEEEeCC
Q 011792 6 VPHVVLLPFPAYGHIKPMLSLAKLFSHAGFRITFVNTD 43 (477)
Q Consensus 6 ~~~il~~~~~~~GHv~p~l~La~~L~~rGH~Vt~~~~~ 43 (477)
+.||+++-.|.. -..+|+.|.++||+|+++...
T Consensus 7 ~~~viIiG~G~~-----G~~la~~L~~~g~~v~vid~~ 39 (140)
T 3fwz_A 7 CNHALLVGYGRV-----GSLLGEKLLASDIPLVVIETS 39 (140)
T ss_dssp CSCEEEECCSHH-----HHHHHHHHHHTTCCEEEEESC
T ss_pred CCCEEEECcCHH-----HHHHHHHHHHCCCCEEEEECC
Confidence 467888865433 357899999999999999864
No 157
>3lp6_A Phosphoribosylaminoimidazole carboxylase catalyti; alpha and beta protein, structural genomics, PSI-2, protein initiative; 1.70A {Mycobacterium tuberculosis} SCOP: c.23.8.0
Probab=32.70 E-value=2.1e+02 Score=23.52 Aligned_cols=139 Identities=12% Similarity=0.056 Sum_probs=76.6
Q ss_pred CcEEEEEecCcccCCHHHHHHHHHHHHhCCCcEEEEEecCCcCCCCCCCCCchhhHhhhcCCCceeeccCHHHHHhcccc
Q 011792 287 RSVLYVSFGSFIKLSGDQILEFWHGIVNSGKGFLWVIRSDLIDGESGVGPVPAELDQGTKERGCIVSWAPQEEVLAHQAI 366 (477)
Q Consensus 287 ~~~v~vs~Gs~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~~p~~~ll~~~~~ 366 (477)
++.|-|-+||.. +....+.....++.++..+=+.+.+ .+..|..+.+ ++-. .....+
T Consensus 7 ~~~V~IimgS~S--D~~v~~~a~~~L~~~gi~~ev~V~S--------aHR~p~~~~~----------~~~~---a~~~g~ 63 (174)
T 3lp6_A 7 RPRVGVIMGSDS--DWPVMADAAAALAEFDIPAEVRVVS--------AHRTPEAMFS----------YARG---AAARGL 63 (174)
T ss_dssp CCSEEEEESCGG--GHHHHHHHHHHHHHTTCCEEEEECC--------TTTCHHHHHH----------HHHH---HHHHTC
T ss_pred CCeEEEEECcHH--hHHHHHHHHHHHHHcCCCEEEEEEC--------CCCCHHHHHH----------HHHH---HHhCCC
Confidence 345667777764 6777888888999999887666632 2344543321 0000 011223
Q ss_pred cccccccCch----hHHHHhhcCCceecCCccchhh--hhH--HHHhhhhceeeec---cCCCCHHHHHHHHHHHHhHhH
Q 011792 367 GGFLTHSGWN----STLESMVAGVPMICWPQVGDQQ--VNS--RCVSEIWKIGFDM---KDTCDRSTIEKLVRDLMDNKR 435 (477)
Q Consensus 367 ~~~I~HGG~g----s~~eal~~GvP~l~~P~~~DQ~--~na--~rv~~~~G~G~~l---~~~~~~~~l~~~v~~ll~~~~ 435 (477)
+++|.=.|.. ++..++ .-+|+|.+|...-.. ..+ .-+.---|+.+.. ++..++..++..|..+- |
T Consensus 64 ~ViIa~AG~aa~LpgvvA~~-t~~PVIgVP~~~~~l~G~daLlS~vqmp~GvpVatV~I~~~~nAa~lAa~Il~~~-d-- 139 (174)
T 3lp6_A 64 EVIIAGAGGAAHLPGMVAAA-TPLPVIGVPVPLGRLDGLDSLLSIVQMPAGVPVATVSIGGAGNAGLLAVRMLGAA-N-- 139 (174)
T ss_dssp CEEEEEEESSCCHHHHHHHH-CSSCEEEEEECCSSGGGHHHHHHHHCCCTTCCCEECCTTCHHHHHHHHHHHHHTT-C--
T ss_pred CEEEEecCchhhhHHHHHhc-cCCCEEEeeCCCCCCCCHHHHHHHhhCCCCCeeEEEEcCcchHHHHHHHHHHhCC-C--
Confidence 3488877753 444443 568999999753211 111 1121112532222 23445555555444332 4
Q ss_pred HHHHHHHHHHHHHHHHH
Q 011792 436 DKIMESTVQIAKMARDA 452 (477)
Q Consensus 436 ~~~~~~a~~l~~~~~~~ 452 (477)
+.++++.+.+++.+++.
T Consensus 140 ~~l~~kl~~~r~~~~~~ 156 (174)
T 3lp6_A 140 PQLRARIVAFQDRLADV 156 (174)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 78888888888888765
No 158
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=32.62 E-value=34 Score=31.28 Aligned_cols=39 Identities=18% Similarity=0.327 Sum_probs=29.6
Q ss_pred CEEEEEcCCCCCCHHHHHHHHHHHHhCCCeEEEEeCCccchhccC
Q 011792 7 PHVVLLPFPAYGHIKPMLSLAKLFSHAGFRITFVNTDQYHDRLFG 51 (477)
Q Consensus 7 ~~il~~~~~~~GHv~p~l~La~~L~~rGH~Vt~~~~~~~~~~l~~ 51 (477)
|||+|+-.|+.| ..+|..|.+.||+|+++.... .+.+.+
T Consensus 3 mkI~IiGaGaiG-----~~~a~~L~~~g~~V~~~~r~~-~~~i~~ 41 (312)
T 3hn2_A 3 LRIAIVGAGALG-----LYYGALLQRSGEDVHFLLRRD-YEAIAG 41 (312)
T ss_dssp -CEEEECCSTTH-----HHHHHHHHHTSCCEEEECSTT-HHHHHH
T ss_pred CEEEEECcCHHH-----HHHHHHHHHCCCeEEEEEcCc-HHHHHh
Confidence 689999877777 456889999999999998755 355544
No 159
>2jk1_A HUPR, hydrogenase transcriptional regulatory protein HU; nucleotide-binding, transcription regulation; 2.10A {Rhodobacter capsulatus} PDB: 2vui_B 2vuh_B
Probab=32.33 E-value=1.6e+02 Score=22.13 Aligned_cols=49 Identities=8% Similarity=-0.080 Sum_probs=30.8
Q ss_pred cCCceecCCccchhhhhHHHHhhhhceeeeccCCCCHHHHHHHHHHHHhH
Q 011792 384 AGVPMICWPQVGDQQVNSRCVSEIWKIGFDMKDTCDRSTIEKLVRDLMDN 433 (477)
Q Consensus 384 ~GvP~l~~P~~~DQ~~na~rv~~~~G~G~~l~~~~~~~~l~~~v~~ll~~ 433 (477)
..+|+|++--..|.......+ +..|+--.+.+.++.++|..++++++..
T Consensus 71 ~~~~ii~~s~~~~~~~~~~~~-~~~ga~~~l~KP~~~~~L~~~i~~~~~~ 119 (139)
T 2jk1_A 71 PETVRIIITGYTDSASMMAAI-NDAGIHQFLTKPWHPEQLLSSARNAARM 119 (139)
T ss_dssp TTSEEEEEESCTTCHHHHHHH-HHTTCCEEEESSCCHHHHHHHHHHHHHH
T ss_pred CCCcEEEEeCCCChHHHHHHH-HhhchhhhccCCCCHHHHHHHHHHHHHH
Confidence 356777764444433333333 3224544555889999999999999874
No 160
>3qvl_A Putative hydantoin racemase; isomerase; HET: 5HY; 1.82A {Klebsiella pneumoniae subsp} PDB: 3qvk_A* 3qvj_A
Probab=32.33 E-value=2.1e+02 Score=24.87 Aligned_cols=36 Identities=11% Similarity=0.060 Sum_probs=26.2
Q ss_pred CEEEEEcCCCCCCH-HHHHHHHHHHHhCCCeEEEEeC
Q 011792 7 PHVVLLPFPAYGHI-KPMLSLAKLFSHAGFRITFVNT 42 (477)
Q Consensus 7 ~~il~~~~~~~GHv-~p~l~La~~L~~rGH~Vt~~~~ 42 (477)
|||+++..-+.-++ ..+...++.+..-|-+|.+++.
T Consensus 2 mrilvINPnts~~~T~~i~~~~~~~~~p~~~i~~~t~ 38 (245)
T 3qvl_A 2 VRIQVINPNTSLAMTETIGAAARAVAAPGTEILAVCP 38 (245)
T ss_dssp EEEEEECSSCCHHHHHHHHHHHHHHCCTTEEEEEECC
T ss_pred CEEEEEeCCCCHHHHHHHHHHHHHhcCCCCEEEEEeC
Confidence 68888877665555 5667778877767888888775
No 161
>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa}
Probab=32.24 E-value=79 Score=29.44 Aligned_cols=36 Identities=17% Similarity=0.132 Sum_probs=23.0
Q ss_pred cEEEEEecCcccCCHHHHHHHHHHHHhCCCcEEEEEec
Q 011792 288 SVLYVSFGSFIKLSGDQILEFWHGIVNSGKGFLWVIRS 325 (477)
Q Consensus 288 ~~v~vs~Gs~~~~~~~~~~~~~~a~~~~~~~~i~~~~~ 325 (477)
.+++.+.||..-..+ ..++.+++++.|++++|....
T Consensus 4 ~i~i~~GGTgGHi~p--alala~~L~~~g~~V~~vg~~ 39 (365)
T 3s2u_A 4 NVLIMAGGTGGHVFP--ALACAREFQARGYAVHWLGTP 39 (365)
T ss_dssp EEEEECCSSHHHHHH--HHHHHHHHHHTTCEEEEEECS
T ss_pred cEEEEcCCCHHHHHH--HHHHHHHHHhCCCEEEEEECC
Confidence 456555666432222 245788888889999988744
No 162
>1jx7_A Hypothetical protein YCHN; NEW fold, hexamer, structural genomics, BSGC structure funded by NIH, protein structure initiative, PSI; 2.80A {Escherichia coli} SCOP: c.114.1.1
Probab=31.96 E-value=79 Score=23.51 Aligned_cols=38 Identities=13% Similarity=0.156 Sum_probs=26.5
Q ss_pred EEEEEc-CCCC--CCHHHHHHHHHHHHhC-CC-eEEEEeCCcc
Q 011792 8 HVVLLP-FPAY--GHIKPMLSLAKLFSHA-GF-RITFVNTDQY 45 (477)
Q Consensus 8 ~il~~~-~~~~--GHv~p~l~La~~L~~r-GH-~Vt~~~~~~~ 45 (477)
|++++- .+.+ ......+.+|..+.+. || +|.++....-
T Consensus 3 k~~ii~~~~p~~~~~~~~al~~a~~~~~~~g~~~v~vff~~dg 45 (117)
T 1jx7_A 3 KIVIVANGAPYGSESLFNSLRLAIALREQESNLDLRLFLMSDA 45 (117)
T ss_dssp EEEEEECCCTTTCSHHHHHHHHHHHHHHHCTTCEEEEEECGGG
T ss_pred EEEEEEcCCCCCcHHHHHHHHHHHHHHhcCCCccEEEEEEchH
Confidence 444444 4434 4456678899999999 99 9999887543
No 163
>3kuu_A Phosphoribosylaminoimidazole carboxylase catalyti PURE; 3-layer (ABA) sandwich, rossmann fold, csgid, lyase, structu genomics; 1.41A {Yersinia pestis} SCOP: c.23.8.1 PDB: 1d7a_A* 1qcz_A 2ate_A* 2nsl_A* 2nsh_A* 2nsj_A*
Probab=31.92 E-value=2.1e+02 Score=23.43 Aligned_cols=140 Identities=11% Similarity=0.050 Sum_probs=78.8
Q ss_pred cEEEEEecCcccCCHHHHHHHHHHHHhCCCcEEEEEecCCcCCCCCCCCCchhhHhhhcCCCceeeccCHHHHHh---cc
Q 011792 288 SVLYVSFGSFIKLSGDQILEFWHGIVNSGKGFLWVIRSDLIDGESGVGPVPAELDQGTKERGCIVSWAPQEEVLA---HQ 364 (477)
Q Consensus 288 ~~v~vs~Gs~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~~p~~~ll~---~~ 364 (477)
+.|-|-+||.. +....+.....++.++..+-+.+.+ .+..|+.+.+ +.. ..
T Consensus 13 ~~V~IimGS~S--D~~v~~~a~~~L~~~Gi~~ev~V~S--------aHR~p~~~~~----------------~~~~a~~~ 66 (174)
T 3kuu_A 13 VKIAIVMGSKS--DWATMQFAADVLTTLNVPFHVEVVS--------AHRTPDRLFS----------------FAEQAEAN 66 (174)
T ss_dssp CCEEEEESSGG--GHHHHHHHHHHHHHTTCCEEEEECC--------TTTCHHHHHH----------------HHHHTTTT
T ss_pred CcEEEEECcHH--HHHHHHHHHHHHHHcCCCEEEEEEc--------ccCCHHHHHH----------------HHHHHHhC
Confidence 44667777764 6777888888999999987666632 2344543321 111 12
Q ss_pred cccccccccCch----hHHHHhhcCCceecCCccchhh-hhHHHH--hh-hhceeeec---c--CCCCHHHHHHHHHHHH
Q 011792 365 AIGGFLTHSGWN----STLESMVAGVPMICWPQVGDQQ-VNSRCV--SE-IWKIGFDM---K--DTCDRSTIEKLVRDLM 431 (477)
Q Consensus 365 ~~~~~I~HGG~g----s~~eal~~GvP~l~~P~~~DQ~-~na~rv--~~-~~G~G~~l---~--~~~~~~~l~~~v~~ll 431 (477)
.++++|.=.|.. ++..++ .-+|+|.+|...-.. .....+ ++ --|+.+.. + ..+++..++..|..+
T Consensus 67 g~~ViIa~AG~aa~LpgvvA~~-t~~PVIgVP~~~~~l~G~dsLlS~vqmP~GvPVatV~I~~a~~~nAa~lAa~ILa~- 144 (174)
T 3kuu_A 67 GLHVIIAGNGGAAHLPGMLAAK-TLVPVLGVPVQSAALSGVDSLYSIVQMPRGIPVGTLAIGKAGAANAALLAAQILAL- 144 (174)
T ss_dssp TCSEEEEEEESSCCHHHHHHHT-CSSCEEEEEECCTTTTTHHHHHHHHTCCTTSCCEECCSSHHHHHHHHHHHHHHHHT-
T ss_pred CCcEEEEECChhhhhHHHHHhc-cCCCEEEeeCCCCCCCCHHHHHHhhhCCCCCeeEEEEeCCccchHHHHHHHHHHcC-
Confidence 234488877753 333333 358999999753211 111111 11 12442222 1 123444555444433
Q ss_pred hHhHHHHHHHHHHHHHHHHHHHHcCC
Q 011792 432 DNKRDKIMESTVQIAKMARDAVKEGG 457 (477)
Q Consensus 432 ~~~~~~~~~~a~~l~~~~~~~~~~gg 457 (477)
.| +.++++.+.+++.+++.+.+..
T Consensus 145 ~d--~~l~~kl~~~r~~~~~~v~~~~ 168 (174)
T 3kuu_A 145 HD--TELAGRLAHWRQSQTDDVLDNP 168 (174)
T ss_dssp TC--HHHHHHHHHHHHHHHHHHHTCC
T ss_pred CC--HHHHHHHHHHHHHHHHHHHhCc
Confidence 25 8999999999999987765543
No 164
>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A*
Probab=31.53 E-value=46 Score=28.81 Aligned_cols=39 Identities=10% Similarity=0.048 Sum_probs=24.6
Q ss_pred CCCCCCCEEEEEcCCCCCCHHHHHHHHHHHHhCCCeEEEEeC
Q 011792 1 MEQTRVPHVVLLPFPAYGHIKPMLSLAKLFSHAGFRITFVNT 42 (477)
Q Consensus 1 m~~~~~~~il~~~~~~~GHv~p~l~La~~L~~rGH~Vt~~~~ 42 (477)
|....+.+.++++.++. -+ =.++++.|+++|++|+++.-
T Consensus 1 M~~~~~~k~vlVTGas~-gI--G~~ia~~l~~~G~~V~~~~r 39 (241)
T 1dhr_A 1 MAASGEARRVLVYGGRG-AL--GSRCVQAFRARNWWVASIDV 39 (241)
T ss_dssp -----CCCEEEEETTTS-HH--HHHHHHHHHTTTCEEEEEES
T ss_pred CCccCCCCEEEEECCCc-HH--HHHHHHHHHhCCCEEEEEeC
Confidence 44333345667776553 22 36789999999999998764
No 165
>3c1a_A Putative oxidoreductase; ZP_00056571.1, oxidoreductase FAM binding rossmann fold, structural genomics; HET: MSE PG4 PGE; 1.85A {Magnetospirillum magnetotacticum}
Probab=31.21 E-value=2.3e+02 Score=25.41 Aligned_cols=106 Identities=12% Similarity=0.117 Sum_probs=55.3
Q ss_pred cEEEEEecCcccCCHHHHHHHHHHHHhC-CCcEEEEEecCCcCCCCCCCCCchhhHhhhcCCCceeeccCHHHHHhcccc
Q 011792 288 SVLYVSFGSFIKLSGDQILEFWHGIVNS-GKGFLWVIRSDLIDGESGVGPVPAELDQGTKERGCIVSWAPQEEVLAHQAI 366 (477)
Q Consensus 288 ~~v~vs~Gs~~~~~~~~~~~~~~a~~~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~~p~~~ll~~~~~ 366 (477)
.+.+|.+|.+.. .++.++.+. +..++.....+ +. ..+...+. +..+-...+++..+++
T Consensus 12 ~igiIG~G~~g~-------~~~~~l~~~~~~~~v~v~d~~-----------~~-~~~~~~~~--~~~~~~~~~~l~~~~~ 70 (315)
T 3c1a_A 12 RLALIGAGRWGK-------NYIRTIAGLPGAALVRLASSN-----------PD-NLALVPPG--CVIESDWRSVVSAPEV 70 (315)
T ss_dssp EEEEEECTTTTT-------THHHHHHHCTTEEEEEEEESC-----------HH-HHTTCCTT--CEEESSTHHHHTCTTC
T ss_pred eEEEECCcHHHH-------HHHHHHHhCCCcEEEEEEeCC-----------HH-HHHHHHhh--CcccCCHHHHhhCCCC
Confidence 477889998873 344555554 44555455321 11 11111122 2234456778864444
Q ss_pred cccccccCc----hhHHHHhhcCCceecC-Cccch--hhhhHHHHhhhhceeeec
Q 011792 367 GGFLTHSGW----NSTLESMVAGVPMICW-PQVGD--QQVNSRCVSEIWKIGFDM 414 (477)
Q Consensus 367 ~~~I~HGG~----gs~~eal~~GvP~l~~-P~~~D--Q~~na~rv~~~~G~G~~l 414 (477)
++++.--.. -.+.+++.+|+++++= |+..+ +-.--..++++.|+-+..
T Consensus 71 D~V~i~tp~~~h~~~~~~al~~Gk~v~~eKP~~~~~~~~~~l~~~a~~~g~~~~~ 125 (315)
T 3c1a_A 71 EAVIIATPPATHAEITLAAIASGKAVLVEKPLTLDLAEAEAVAAAAKATGVMVWV 125 (315)
T ss_dssp CEEEEESCGGGHHHHHHHHHHTTCEEEEESSSCSCHHHHHHHHHHHHHHCCCEEE
T ss_pred CEEEEeCChHHHHHHHHHHHHCCCcEEEcCCCcCCHHHHHHHHHHHHHcCCEEEE
Confidence 446544333 3466789999998875 77543 322233333445655444
No 166
>3rc1_A Sugar 3-ketoreductase; sugar biosynthesis, TDP binding, NADP binding binding protein; HET: TLO NAP; 1.71A {Actinomadura kijaniata} PDB: 3rbv_A* 3rc2_A* 3rcb_A* 3rc7_A* 3rc9_A*
Probab=31.02 E-value=92 Score=28.81 Aligned_cols=110 Identities=7% Similarity=-0.053 Sum_probs=57.3
Q ss_pred cEEEEEecCcccCCHHHHHHHHHHHHhC-CCcEEEEEecCCcCCCCCCCCCchhhHhhhcCCCceeeccCHHHHHhcccc
Q 011792 288 SVLYVSFGSFIKLSGDQILEFWHGIVNS-GKGFLWVIRSDLIDGESGVGPVPAELDQGTKERGCIVSWAPQEEVLAHQAI 366 (477)
Q Consensus 288 ~~v~vs~Gs~~~~~~~~~~~~~~a~~~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~~p~~~ll~~~~~ 366 (477)
.+.+|+.|.+.. ..++.++... +..++.+...+. .....+.++. ++ ..+-...++|..+++
T Consensus 29 rigiIG~G~~g~------~~~~~~l~~~~~~~l~av~d~~~--------~~~~~~a~~~--g~--~~~~~~~~ll~~~~~ 90 (350)
T 3rc1_A 29 RVGVIGCADIAW------RRALPALEAEPLTEVTAIASRRW--------DRAKRFTERF--GG--EPVEGYPALLERDDV 90 (350)
T ss_dssp EEEEESCCHHHH------HTHHHHHHHCTTEEEEEEEESSH--------HHHHHHHHHH--CS--EEEESHHHHHTCTTC
T ss_pred EEEEEcCcHHHH------HHHHHHHHhCCCeEEEEEEcCCH--------HHHHHHHHHc--CC--CCcCCHHHHhcCCCC
Confidence 467788887652 2456666665 445544443210 0011111111 22 234567788877666
Q ss_pred cccccccC----chhHHHHhhcCCceec-CCccc--hhhhhHHHHhhhhceeeecc
Q 011792 367 GGFLTHSG----WNSTLESMVAGVPMIC-WPQVG--DQQVNSRCVSEIWKIGFDMK 415 (477)
Q Consensus 367 ~~~I~HGG----~gs~~eal~~GvP~l~-~P~~~--DQ~~na~rv~~~~G~G~~l~ 415 (477)
++|+---- .-.+.+++.+|+++++ -|+.. ++-.-...++++.|+-+...
T Consensus 91 D~V~i~tp~~~h~~~~~~al~aGk~Vl~EKP~a~~~~ea~~l~~~a~~~g~~~~v~ 146 (350)
T 3rc1_A 91 DAVYVPLPAVLHAEWIDRALRAGKHVLAEKPLTTDRPQAERLFAVARERGLLLMEN 146 (350)
T ss_dssp SEEEECCCGGGHHHHHHHHHHTTCEEEEESSSCSSHHHHHHHHHHHHHTTCCEEEE
T ss_pred CEEEECCCcHHHHHHHHHHHHCCCcEEEeCCCCCCHHHHHHHHHHHHHhCCEEEEE
Confidence 55664322 2356778999999876 36544 34333333445456555443
No 167
>3lyu_A Putative hydrogenase; the C-terminal has AN alpha-beta fold, structural genomics, PSI-2, protein structure initiative; 2.30A {Pyrococcus furiosus}
Probab=30.94 E-value=44 Score=26.35 Aligned_cols=35 Identities=14% Similarity=0.167 Sum_probs=28.5
Q ss_pred CEEEEEcCCCCCCHHHHHHHHHHHHhCCCeEEEEeCCc
Q 011792 7 PHVVLLPFPAYGHIKPMLSLAKLFSHAGFRITFVNTDQ 44 (477)
Q Consensus 7 ~~il~~~~~~~GHv~p~l~La~~L~~rGH~Vt~~~~~~ 44 (477)
.+++++..|. =+-|++.+++.|.++|.+|+++ ...
T Consensus 19 ~~~llIaGG~--GiaPl~sm~~~l~~~~~~v~l~-g~R 53 (142)
T 3lyu_A 19 GKILAIGAYT--GIVEVYPIAKAWQEIGNDVTTL-HVT 53 (142)
T ss_dssp SEEEEEEETT--HHHHHHHHHHHHHHTTCEEEEE-EEE
T ss_pred CeEEEEECcC--cHHHHHHHHHHHHhcCCcEEEE-EeC
Confidence 4677776654 5899999999999999999998 543
No 168
>2hy5_A Putative sulfurtransferase DSRE; DSRE, DSRF, sulfur, structural genomics, PSI, protein initiative, berkeley structural genomics center, BSGC, TRAN; 1.72A {Allochromatium vinosum} SCOP: c.114.1.1 PDB: 2hyb_A
Probab=30.85 E-value=97 Score=23.84 Aligned_cols=35 Identities=17% Similarity=0.169 Sum_probs=25.8
Q ss_pred EEEcCCCCCC--HHHHHHHHHHHHhCCCeE-EEEeCCc
Q 011792 10 VLLPFPAYGH--IKPMLSLAKLFSHAGFRI-TFVNTDQ 44 (477)
Q Consensus 10 l~~~~~~~GH--v~p~l~La~~L~~rGH~V-t~~~~~~ 44 (477)
++++.+.+|+ ....+.+|.++.+.||+| .++...+
T Consensus 5 iiv~~~p~~~~~~~~al~~a~a~~~~g~~v~~vff~~d 42 (130)
T 2hy5_A 5 LQINEGPYQHQASDSAYQFAKAALEKGHEIFRVFFYHD 42 (130)
T ss_dssp EEECSCTTTSTHHHHHHHHHHHHHHTTCEEEEEEECGG
T ss_pred EEEeCCCCCcHHHHHHHHHHHHHHhcCCeeCEEEEech
Confidence 4445556654 455788899999999999 8887744
No 169
>2glx_A 1,5-anhydro-D-fructose reductase; NADP(H) dependent reductase, rossmann-fold, sugar metabolism, 1,5-anhydro-D-mannitol, oxidoreductase; HET: NDP; 2.20A {Ensifer adhaerens}
Probab=30.79 E-value=2.1e+02 Score=25.88 Aligned_cols=61 Identities=13% Similarity=0.183 Sum_probs=35.1
Q ss_pred cCHHHHHhcccccccccccCc----hhHHHHhhcCCceecC-Cccch--hhhhHHHHhhhhceeeecc
Q 011792 355 APQEEVLAHQAIGGFLTHSGW----NSTLESMVAGVPMICW-PQVGD--QQVNSRCVSEIWKIGFDMK 415 (477)
Q Consensus 355 ~p~~~ll~~~~~~~~I~HGG~----gs~~eal~~GvP~l~~-P~~~D--Q~~na~rv~~~~G~G~~l~ 415 (477)
-...+++..+++++++.--.. ..+.+++.+|+++++- |+..+ +-.-...++++.|+-+...
T Consensus 52 ~~~~~~l~~~~~D~V~i~tp~~~h~~~~~~al~~Gk~v~~ekP~~~~~~~~~~l~~~a~~~g~~~~~~ 119 (332)
T 2glx_A 52 TSVEELVGDPDVDAVYVSTTNELHREQTLAAIRAGKHVLCEKPLAMTLEDAREMVVAAREAGVVLGTN 119 (332)
T ss_dssp SCHHHHHTCTTCCEEEECSCGGGHHHHHHHHHHTTCEEEECSSSCSSHHHHHHHHHHHHHHTCCEEEC
T ss_pred CCHHHHhcCCCCCEEEEeCChhHhHHHHHHHHHCCCeEEEeCCCcCCHHHHHHHHHHHHHcCCEEEEe
Confidence 356678876445446654443 3466789999999874 76543 3222233334456655554
No 170
>1iow_A DD-ligase, DDLB, D-ALA\:D-Ala ligase; glycogen phosphorylase, cell WALL, peptidoglycan synthesis, vancomycin, ADP binding; HET: ADP PHY; 1.90A {Escherichia coli} SCOP: c.30.1.2 d.142.1.1 PDB: 1iov_A* 2dln_A* 3v4z_A*
Probab=30.53 E-value=82 Score=28.16 Aligned_cols=38 Identities=8% Similarity=-0.031 Sum_probs=27.9
Q ss_pred CCEEEEEcCCCC-CCHH---HHHHHHHHHHhCCCeEEEEeCC
Q 011792 6 VPHVVLLPFPAY-GHIK---PMLSLAKLFSHAGFRITFVNTD 43 (477)
Q Consensus 6 ~~~il~~~~~~~-GHv~---p~l~La~~L~~rGH~Vt~~~~~ 43 (477)
+++|+++..+.. -|-. ....++++|.++||+|.++...
T Consensus 2 ~~~i~il~gg~s~e~~~s~~~~~~l~~al~~~G~~v~~~~~~ 43 (306)
T 1iow_A 2 TDKIAVLLGGTSAEREVSLNSGAAVLAGLREGGIDAYPVDPK 43 (306)
T ss_dssp CCEEEEECCCSSTTHHHHHHHHHHHHHHHHHTTCEEEEECTT
T ss_pred CcEEEEEeCCCCccceEcHHhHHHHHHHHHHCCCeEEEEecC
Confidence 478988876543 2222 3468999999999999998764
No 171
>1u7z_A Coenzyme A biosynthesis bifunctional protein coabc; ligase; HET: PMT; 2.30A {Escherichia coli} SCOP: c.72.3.1 PDB: 1u7w_A* 1u7u_A* 1u80_A*
Probab=30.51 E-value=55 Score=28.38 Aligned_cols=23 Identities=22% Similarity=0.255 Sum_probs=18.9
Q ss_pred HHHHHHHHHHHhCCCeEEEEeCC
Q 011792 21 KPMLSLAKLFSHAGFRITFVNTD 43 (477)
Q Consensus 21 ~p~l~La~~L~~rGH~Vt~~~~~ 43 (477)
.--.++|++|+++|++|+++..+
T Consensus 35 ~iG~aiA~~~~~~Ga~V~l~~~~ 57 (226)
T 1u7z_A 35 KMGFAIAAAAARRGANVTLVSGP 57 (226)
T ss_dssp HHHHHHHHHHHHTTCEEEEEECS
T ss_pred HHHHHHHHHHHHCCCEEEEEECC
Confidence 34578899999999999998653
No 172
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=30.32 E-value=32 Score=31.53 Aligned_cols=39 Identities=13% Similarity=0.246 Sum_probs=29.4
Q ss_pred CEEEEEcCCCCCCHHHHHHHHHHHHhCCCeEEEEeCCccchhccC
Q 011792 7 PHVVLLPFPAYGHIKPMLSLAKLFSHAGFRITFVNTDQYHDRLFG 51 (477)
Q Consensus 7 ~~il~~~~~~~GHv~p~l~La~~L~~rGH~Vt~~~~~~~~~~l~~ 51 (477)
|||+|+-.|+.| ..+|..|.+.||+|+++.... .+.+.+
T Consensus 3 mkI~IiGaGaiG-----~~~a~~L~~~g~~V~~~~r~~-~~~i~~ 41 (320)
T 3i83_A 3 LNILVIGTGAIG-----SFYGALLAKTGHCVSVVSRSD-YETVKA 41 (320)
T ss_dssp CEEEEESCCHHH-----HHHHHHHHHTTCEEEEECSTT-HHHHHH
T ss_pred CEEEEECcCHHH-----HHHHHHHHhCCCeEEEEeCCh-HHHHHh
Confidence 789999766655 467889999999999998754 344443
No 173
>3qrx_B Melittin; calcium-binding, EF-hand, cell division, calcium binding, ME binding protein-toxin complex; 2.20A {Chlamydomonas reinhardtii} PDB: 1bh1_A 2mlt_A
Probab=30.19 E-value=14 Score=19.14 Aligned_cols=17 Identities=24% Similarity=0.606 Sum_probs=14.0
Q ss_pred CchhHHHHhhcCCceec
Q 011792 374 GWNSTLESMVAGVPMIC 390 (477)
Q Consensus 374 G~gs~~eal~~GvP~l~ 390 (477)
|.|++.-.|..|.|.++
T Consensus 1 giGa~LKVLa~~LP~li 17 (26)
T 3qrx_B 1 GIGAVLKVLTTGLPALI 17 (26)
T ss_pred CchHHHHHHHccchHHH
Confidence 67888888999988765
No 174
>3o9z_A Lipopolysaccaride biosynthesis protein WBPB; oxidoreductase, sugar biosynthesis, dehydrogenase; HET: NAD AKG; 1.45A {Thermus thermophilus} PDB: 3oa0_A*
Probab=30.02 E-value=3.1e+02 Score=24.68 Aligned_cols=109 Identities=9% Similarity=-0.011 Sum_probs=55.8
Q ss_pred cEEEEEe-cCcccCCHHHHHHHHHHHHhCCCcEEEEEecCCcCCCCCCCCCchhhHhhhcCCCceeeccCHHHHH-----
Q 011792 288 SVLYVSF-GSFIKLSGDQILEFWHGIVNSGKGFLWVIRSDLIDGESGVGPVPAELDQGTKERGCIVSWAPQEEVL----- 361 (477)
Q Consensus 288 ~~v~vs~-Gs~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~~p~~~ll----- 361 (477)
.+.+|+. |.+. ...+.++...+..++.+...+. .. ..+.+.. .+. .-+....+++
T Consensus 5 rvgiIG~gG~i~-------~~h~~~l~~~~~~lvav~d~~~--------~~-~~~~~~~-~~~--~~~~~~~~ll~~~~~ 65 (312)
T 3o9z_A 5 RFALTGLAGYIA-------PRHLKAIKEVGGVLVASLDPAT--------NV-GLVDSFF-PEA--EFFTEPEAFEAYLED 65 (312)
T ss_dssp EEEEECTTSSSH-------HHHHHHHHHTTCEEEEEECSSC--------CC-GGGGGTC-TTC--EEESCHHHHHHHHHH
T ss_pred EEEEECCChHHH-------HHHHHHHHhCCCEEEEEEcCCH--------HH-HHHHhhC-CCC--ceeCCHHHHHHHhhh
Confidence 3566777 4454 3456666666777666663221 11 1111111 122 2344556666
Q ss_pred ---hcccccccccccCc----hhHHHHhhcCCceec-CCccc--hhhhhHHHHhhhhceeeecc
Q 011792 362 ---AHQAIGGFLTHSGW----NSTLESMVAGVPMIC-WPQVG--DQQVNSRCVSEIWKIGFDMK 415 (477)
Q Consensus 362 ---~~~~~~~~I~HGG~----gs~~eal~~GvP~l~-~P~~~--DQ~~na~rv~~~~G~G~~l~ 415 (477)
..+++++|+----. --+.+||.+|+++++ -|+.. ++-.--..++++.|+-+...
T Consensus 66 l~~~~~~vD~V~I~tP~~~H~~~~~~al~aGkhVl~EKPla~~~~ea~~l~~~a~~~g~~~~v~ 129 (312)
T 3o9z_A 66 LRDRGEGVDYLSIASPNHLHYPQIRMALRLGANALSEKPLVLWPEEIARLKELEARTGRRVYTV 129 (312)
T ss_dssp HHHTTCCCSEEEECSCGGGHHHHHHHHHHTTCEEEECSSSCSCHHHHHHHHHHHHHHCCCEEEC
T ss_pred hcccCCCCcEEEECCCchhhHHHHHHHHHCCCeEEEECCCCCCHHHHHHHHHHHHHcCCEEEEE
Confidence 55666666643332 347788999999887 36544 33333333444456544443
No 175
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=29.90 E-value=23 Score=27.55 Aligned_cols=31 Identities=16% Similarity=0.293 Sum_probs=22.9
Q ss_pred CEEEEEcCCCCCCHHHHHHHHHHHHhCCCeEEEEeC
Q 011792 7 PHVVLLPFPAYGHIKPMLSLAKLFSHAGFRITFVNT 42 (477)
Q Consensus 7 ~~il~~~~~~~GHv~p~l~La~~L~~rGH~Vt~~~~ 42 (477)
.+|+++-. |.+- ..+++.|.+.|++|+++..
T Consensus 7 ~~v~I~G~---G~iG--~~~a~~l~~~g~~v~~~d~ 37 (144)
T 2hmt_A 7 KQFAVIGL---GRFG--GSIVKELHRMGHEVLAVDI 37 (144)
T ss_dssp CSEEEECC---SHHH--HHHHHHHHHTTCCCEEEES
T ss_pred CcEEEECC---CHHH--HHHHHHHHHCCCEEEEEeC
Confidence 46777753 4443 5678999999999998865
No 176
>3zzm_A Bifunctional purine biosynthesis protein PURH; transferase, hydrolase; HET: JLN; 2.20A {Mycobacterium tuberculosis} PDB: 4a1o_A*
Probab=29.88 E-value=98 Score=30.29 Aligned_cols=100 Identities=12% Similarity=0.002 Sum_probs=56.9
Q ss_pred CCEEEEEcCCCCCCHHHHHHHHHHHHhCCCeEEEEeCCccchhccCCCcccccccCCCCeEEEeCCC--CCCCCCCC--C
Q 011792 6 VPHVVLLPFPAYGHIKPMLSLAKLFSHAGFRITFVNTDQYHDRLFGNTDVTAFYKHFPNFLCTSIPD--GLPPDNPR--F 81 (477)
Q Consensus 6 ~~~il~~~~~~~GHv~p~l~La~~L~~rGH~Vt~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~--~~~~~~~~--~ 81 (477)
++|-+|++. ++=.-++.+|+.|.+.|.++. ++..-.+.+.+.+ +.+..+.+ ++|+..-. .
T Consensus 9 ~i~~aLISV---sDK~glvelAk~L~~lGfeI~--ATgGTak~L~e~G-----------I~v~~V~~vTgfPEil~GRVK 72 (523)
T 3zzm_A 9 PIRRALISV---YDKTGLVDLAQGLSAAGVEII--STGSTAKTIADTG-----------IPVTPVEQLTGFPEVLDGRVK 72 (523)
T ss_dssp CCCEEEEEE---SSCTTHHHHHHHHHHTTCEEE--ECHHHHHHHHTTT-----------CCCEEHHHHHSCCCCTTTTSS
T ss_pred cccEEEEEE---eccccHHHHHHHHHHCCCEEE--EcchHHHHHHHcC-----------CceeeccccCCCchhhCCccc
Confidence 466677766 344558899999999999875 4546666666643 33333321 44443222 2
Q ss_pred CCChHHHHHhhchh-cHHHHHHHHhcCCCCCeEEEECCCcc
Q 011792 82 GIYTKDWFCSNKPV-SKLAFRQLLMTPGRLPTCIISDSIMS 121 (477)
Q Consensus 82 ~~~~~~~~~~~~~~-~~~~l~~~l~~~~~~~D~vI~D~~~~ 121 (477)
+.++.-.-..+.+. ......++-+..-..+|+||++..-+
T Consensus 73 TLHP~ihgGiLa~r~~~~h~~~l~~~~i~~iDlVvvNLYPF 113 (523)
T 3zzm_A 73 TLHPRVHAGLLADLRKSEHAAALEQLGIEAFELVVVNLYPF 113 (523)
T ss_dssp SCSHHHHHHHHCCTTSHHHHHHHHHHTCCCCSEEEEECCCH
T ss_pred cCCchhhhhhccCCCCHHHHHHHHHCCCCceeEEEEeCCCh
Confidence 33333333444433 33444444433223899999997554
No 177
>3ot1_A 4-methyl-5(B-hydroxyethyl)-thiazole monophosphate biosynthesis enzyme; csgid, structural genomics; HET: MSE CSX; 1.16A {Vibrio cholerae o1 biovar el tor} SCOP: c.23.16.0
Probab=29.58 E-value=95 Score=26.20 Aligned_cols=42 Identities=17% Similarity=0.215 Sum_probs=29.7
Q ss_pred CCCCCCCEEEEEcCCCCCCHHHHHHHHHHHHhCCCeEEEEeCC
Q 011792 1 MEQTRVPHVVLLPFPAYGHIKPMLSLAKLFSHAGFRITFVNTD 43 (477)
Q Consensus 1 m~~~~~~~il~~~~~~~GHv~p~l~La~~L~~rGH~Vt~~~~~ 43 (477)
|+..+..||+|+..++.- ..-+....+.|.+.|++|++++..
T Consensus 4 ~~~~m~~~v~ill~~g~~-~~e~~~~~~~l~~ag~~v~~vs~~ 45 (208)
T 3ot1_A 4 MEQGMSKRILVPVAHGSE-EMETVIIVDTLVRAGFQVTMAAVG 45 (208)
T ss_dssp -----CCEEEEEECTTCC-HHHHHHHHHHHHHTTCEEEEEESS
T ss_pred cccccCCeEEEEECCCCc-HHHHHHHHHHHHHCCCEEEEEEcC
Confidence 554445689999888754 555666778899999999999984
No 178
>3moi_A Probable dehydrogenase; structural genomics, PSI2, MCSG, protein structure initiativ midwest center for structural genomics; 2.50A {Bordetella bronchiseptica}
Probab=29.50 E-value=1.8e+02 Score=27.28 Aligned_cols=78 Identities=14% Similarity=0.165 Sum_probs=45.8
Q ss_pred eccCHHHHHhcccccccccccCch----hHHHHhhcCCceec-CCccc--hhhhhHHHHhhhhceeeecc--CCCCHHHH
Q 011792 353 SWAPQEEVLAHQAIGGFLTHSGWN----STLESMVAGVPMIC-WPQVG--DQQVNSRCVSEIWKIGFDMK--DTCDRSTI 423 (477)
Q Consensus 353 ~~~p~~~ll~~~~~~~~I~HGG~g----s~~eal~~GvP~l~-~P~~~--DQ~~na~rv~~~~G~G~~l~--~~~~~~~l 423 (477)
.+-...++|..+++++||----.. -+.+|+.+|+++++ -|+.. ++-.--..++++.|+-+.+. ..+++.
T Consensus 52 ~~~~~~ell~~~~vD~V~i~tp~~~H~~~~~~al~aGk~Vl~EKP~a~~~~e~~~l~~~a~~~g~~~~v~~~~R~~p~-- 129 (387)
T 3moi_A 52 VFATLAEMMQHVQMDAVYIASPHQFHCEHVVQASEQGLHIIVEKPLTLSRDEADRMIEAVERAGVHLVVGTSRSHDPV-- 129 (387)
T ss_dssp EESSHHHHHHHSCCSEEEECSCGGGHHHHHHHHHHTTCEEEECSCCCSCHHHHHHHHHHHHHHTCCEEECCCGGGSHH--
T ss_pred eECCHHHHHcCCCCCEEEEcCCcHHHHHHHHHHHHCCCceeeeCCccCCHHHHHHHHHHHHHhCCeEEEEeccccCHH--
Confidence 355678899887666677544333 47788999999987 46543 33333334445567655554 244442
Q ss_pred HHHHHHHHh
Q 011792 424 EKLVRDLMD 432 (477)
Q Consensus 424 ~~~v~~ll~ 432 (477)
...+++++.
T Consensus 130 ~~~~k~~i~ 138 (387)
T 3moi_A 130 VRTLRAIVQ 138 (387)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHh
Confidence 334455554
No 179
>2qh9_A UPF0215 protein AF_1433; structural genomics, PSI-2, MCSG, PR structure initiative; 1.80A {Archaeoglobus fulgidus}
Probab=29.35 E-value=96 Score=25.84 Aligned_cols=40 Identities=18% Similarity=0.182 Sum_probs=29.1
Q ss_pred HHHHHHhcCCCC--CeEEEECCCcch------HHHHHHHcCCCeEEEc
Q 011792 99 AFRQLLMTPGRL--PTCIISDSIMSF------AIDVAEELNIPIITFR 138 (477)
Q Consensus 99 ~l~~~l~~~~~~--~D~vI~D~~~~~------~~~~A~~lgiP~v~~~ 138 (477)
.+.++++....+ +|+|+.|...++ ...+...+|+|+|.+.
T Consensus 51 ~i~~~~~~l~~~p~~~vvllDG~g~agfn~~di~~l~~~~~~P~I~V~ 98 (184)
T 2qh9_A 51 KLISMVRRSKFREQIKCIFLPGITLGGFNLVDIQRVYRETKIPVVVVM 98 (184)
T ss_dssp HHHHHHTTCTTTTTEEEEEESSSEETTTEECCHHHHHHHHCCCEEEEE
T ss_pred HHHHHHHhcCCCCCCcEEEECCEeeccCCEeCHHHHHHhhCCCEEEEE
Confidence 455666554435 599999998773 3368889999999874
No 180
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=29.20 E-value=28 Score=34.39 Aligned_cols=34 Identities=15% Similarity=0.274 Sum_probs=27.3
Q ss_pred CCEEEEEcCCCCCCHHHHHHHHHHHHhCCCeEEEEeCCc
Q 011792 6 VPHVVLLPFPAYGHIKPMLSLAKLFSHAGFRITFVNTDQ 44 (477)
Q Consensus 6 ~~~il~~~~~~~GHv~p~l~La~~L~~rGH~Vt~~~~~~ 44 (477)
|.||+|+-.|.-| +.+|+.|.++|++||++....
T Consensus 42 KprVVIIGgG~AG-----l~~A~~L~~~~~~VtLId~~~ 75 (502)
T 4g6h_A 42 KPNVLILGSGWGA-----ISFLKHIDTKKYNVSIISPRS 75 (502)
T ss_dssp SCEEEEECSSHHH-----HHHHHHSCTTTCEEEEEESSS
T ss_pred CCCEEEECCcHHH-----HHHHHHhhhCCCcEEEECCCC
Confidence 6899998765434 578999999999999998754
No 181
>3to5_A CHEY homolog; alpha(5)beta(5), chemotaxis, FLIM, phosphorylation, motor AC signaling protein; 1.65A {Vibrio cholerae}
Probab=29.16 E-value=49 Score=25.84 Aligned_cols=47 Identities=4% Similarity=0.106 Sum_probs=35.5
Q ss_pred cCCceecCCccchhhhhHHHHhhhhceeeeccCCCCHHHHHHHHHHHHh
Q 011792 384 AGVPMICWPQVGDQQVNSRCVSEIWKIGFDMKDTCDRSTIEKLVRDLMD 432 (477)
Q Consensus 384 ~GvP~l~~P~~~DQ~~na~rv~~~~G~G~~l~~~~~~~~l~~~v~~ll~ 432 (477)
..+|+|++--..+...-.... + .|+--.+.|.++.++|.++|+++++
T Consensus 86 ~~ipvI~lTa~~~~~~~~~~~-~-~Ga~~yl~KP~~~~~L~~~i~~~l~ 132 (134)
T 3to5_A 86 KHLPVLMITAEAKREQIIEAA-Q-AGVNGYIVKPFTAATLKEKLDKIFE 132 (134)
T ss_dssp TTCCEEEEESSCCHHHHHHHH-H-TTCCEEEESSCCHHHHHHHHHHHCC
T ss_pred CCCeEEEEECCCCHHHHHHHH-H-CCCCEEEECCCCHHHHHHHHHHHHh
Confidence 468988887666555444443 4 6887778889999999999999875
No 182
>3mz0_A Inositol 2-dehydrogenase/D-chiro-inositol 3-dehyd; MYO-inositol dehydrogenase, bsidh, oxidoreductase; HET: MSE PGE; 1.54A {Bacillus subtilis} PDB: 3nt2_A* 3nt4_A* 3nt5_A* 3nto_A* 3ntq_A* 3ntr_A*
Probab=29.15 E-value=2.3e+02 Score=25.89 Aligned_cols=61 Identities=15% Similarity=0.129 Sum_probs=35.9
Q ss_pred eeccCHHHHHhcccccccccccC----chhHHHHhhcCCceec-CCccc--hhhhhHHHHhhhhceee
Q 011792 352 VSWAPQEEVLAHQAIGGFLTHSG----WNSTLESMVAGVPMIC-WPQVG--DQQVNSRCVSEIWKIGF 412 (477)
Q Consensus 352 ~~~~p~~~ll~~~~~~~~I~HGG----~gs~~eal~~GvP~l~-~P~~~--DQ~~na~rv~~~~G~G~ 412 (477)
..+-...+++..+++++++--.- .--+.+++.+|+++++ -|+.. ++-.--..++++.|+-+
T Consensus 53 ~~~~~~~~ll~~~~~D~V~i~tp~~~h~~~~~~al~~Gk~vl~EKP~a~~~~e~~~l~~~a~~~g~~~ 120 (344)
T 3mz0_A 53 TVYPNDDSLLADENVDAVLVTSWGPAHESSVLKAIKAQKYVFCEKPLATTAEGCMRIVEEEIKVGKRL 120 (344)
T ss_dssp EEESSHHHHHHCTTCCEEEECSCGGGHHHHHHHHHHTTCEEEECSCSCSSHHHHHHHHHHHHHHSSCC
T ss_pred eeeCCHHHHhcCCCCCEEEECCCchhHHHHHHHHHHCCCcEEEcCCCCCCHHHHHHHHHHHHHHCCEE
Confidence 34556788888766655664333 2346678999999876 46543 33332233334456544
No 183
>3u3x_A Oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.79A {Sinorhizobium meliloti}
Probab=29.12 E-value=2e+02 Score=26.54 Aligned_cols=111 Identities=16% Similarity=0.102 Sum_probs=61.0
Q ss_pred cEEEEEecCcccCCHHHHHHHHHHHHhCCCcEEEEEecCCcCCCCCCCCCchhhHhhhcCCCceeeccCHHHHHhccccc
Q 011792 288 SVLYVSFGSFIKLSGDQILEFWHGIVNSGKGFLWVIRSDLIDGESGVGPVPAELDQGTKERGCIVSWAPQEEVLAHQAIG 367 (477)
Q Consensus 288 ~~v~vs~Gs~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~~p~~~ll~~~~~~ 367 (477)
.+..|+.|.+.. ..+..++...+.+++.+...+. .....+.++.+ ...-+-...++|..++++
T Consensus 28 rvgiiG~G~~~~------~~~~~~~~~~~~~lvav~d~~~--------~~a~~~a~~~~---~~~~~~~~~~ll~~~~vD 90 (361)
T 3u3x_A 28 RFAAVGLNHNHI------YGQVNCLLRAGARLAGFHEKDD--------ALAAEFSAVYA---DARRIATAEEILEDENIG 90 (361)
T ss_dssp EEEEECCCSTTH------HHHHHHHHHTTCEEEEEECSCH--------HHHHHHHHHSS---SCCEESCHHHHHTCTTCC
T ss_pred EEEEECcCHHHH------HHHHHHhhcCCcEEEEEEcCCH--------HHHHHHHHHcC---CCcccCCHHHHhcCCCCC
Confidence 477788886532 2344455556777666663210 00111222111 122356788899887777
Q ss_pred ccccccCch----hHHHHhhcCCceec-CCccch--hhhhHHHHhhhhceeeecc
Q 011792 368 GFLTHSGWN----STLESMVAGVPMIC-WPQVGD--QQVNSRCVSEIWKIGFDMK 415 (477)
Q Consensus 368 ~~I~HGG~g----s~~eal~~GvP~l~-~P~~~D--Q~~na~rv~~~~G~G~~l~ 415 (477)
+|+--.-.. -+.+||.+|+++++ -|+..+ +-.-...++++.|+-+.+.
T Consensus 91 ~V~I~tp~~~H~~~~~~al~aGkhVl~EKPla~~~~ea~~l~~~a~~~g~~l~v~ 145 (361)
T 3u3x_A 91 LIVSAAVSSERAELAIRAMQHGKDVLVDKPGMTSFDQLAKLRRVQAETGRIFSIL 145 (361)
T ss_dssp EEEECCCHHHHHHHHHHHHHTTCEEEEESCSCSSHHHHHHHHHHHHTTCCCEEEE
T ss_pred EEEEeCChHHHHHHHHHHHHCCCeEEEeCCCCCCHHHHHHHHHHHHHcCCEEEEe
Confidence 777544433 47788999999988 676543 3333333444455544443
No 184
>3f67_A Putative dienelactone hydrolase; alpha-beta-alpha sandwich, structural genomics, PSI-2, prote structure initiative; 1.74A {Klebsiella pneumoniae subsp}
Probab=29.02 E-value=65 Score=27.11 Aligned_cols=36 Identities=11% Similarity=0.217 Sum_probs=30.1
Q ss_pred CEEEEEcCCCCCCHHHHHHHHHHHHhCCCeEEEEeC
Q 011792 7 PHVVLLPFPAYGHIKPMLSLAKLFSHAGFRITFVNT 42 (477)
Q Consensus 7 ~~il~~~~~~~GHv~p~l~La~~L~~rGH~Vt~~~~ 42 (477)
..++++.++..|+-.-+..+++.|+++|+.|..+-.
T Consensus 32 ~p~vv~~HG~~g~~~~~~~~~~~l~~~G~~v~~~d~ 67 (241)
T 3f67_A 32 LPIVIVVQEIFGVHEHIRDLCRRLAQEGYLAIAPEL 67 (241)
T ss_dssp EEEEEEECCTTCSCHHHHHHHHHHHHTTCEEEEECT
T ss_pred CCEEEEEcCcCccCHHHHHHHHHHHHCCcEEEEecc
Confidence 457777788778888899999999999999887754
No 185
>2rjn_A Response regulator receiver:metal-dependent phosphohydrolase, HD subdomain; structural genomics, oceanospirillum SP. MED92; 2.10A {Neptuniibacter caesariensis}
Probab=28.70 E-value=33 Score=26.94 Aligned_cols=63 Identities=11% Similarity=0.116 Sum_probs=37.9
Q ss_pred cCCceecCCccchhhhhHHHHhhhhc-eeeeccCCCCHHHHHHHHHHHHhHhHHHHHHHHHHHHHHHH
Q 011792 384 AGVPMICWPQVGDQQVNSRCVSEIWK-IGFDMKDTCDRSTIEKLVRDLMDNKRDKIMESTVQIAKMAR 450 (477)
Q Consensus 384 ~GvP~l~~P~~~DQ~~na~rv~~~~G-~G~~l~~~~~~~~l~~~v~~ll~~~~~~~~~~a~~l~~~~~ 450 (477)
..+|+|++--..+.......+ + .| +--.+.+.++.++|.++|+.++.. ..+++..+++.+.++
T Consensus 78 ~~~~ii~ls~~~~~~~~~~~~-~-~g~~~~~l~kP~~~~~L~~~i~~~~~~--~~~~~~~~~~~~~~~ 141 (154)
T 2rjn_A 78 PDIERVVISGYADAQATIDAV-N-RGKISRFLLKPWEDEDVFKVVEKGLQL--AFLREENLRLQEETE 141 (154)
T ss_dssp TTSEEEEEECGGGHHHHHHHH-H-TTCCSEEEESSCCHHHHHHHHHHHHHH--HHHHHHTTSCCC---
T ss_pred CCCcEEEEecCCCHHHHHHHH-h-ccchheeeeCCCCHHHHHHHHHHHHHH--HHHHHHHHHHHHHHH
Confidence 467888775554433333333 3 45 544555789999999999999985 455444444444433
No 186
>1gsa_A Glutathione synthetase; ligase; HET: ADP GSH; 2.00A {Escherichia coli} SCOP: c.30.1.3 d.142.1.1 PDB: 1gsh_A 2glt_A 1glv_A
Probab=28.44 E-value=44 Score=30.09 Aligned_cols=37 Identities=5% Similarity=0.151 Sum_probs=28.1
Q ss_pred CEEEEEcCCCCC---CHHHHHHHHHHHHhCCCeEEEEeCC
Q 011792 7 PHVVLLPFPAYG---HIKPMLSLAKLFSHAGFRITFVNTD 43 (477)
Q Consensus 7 ~~il~~~~~~~G---Hv~p~l~La~~L~~rGH~Vt~~~~~ 43 (477)
|||+++..+... .......++++|.++||+|.++.+.
T Consensus 2 m~i~il~~~~~~~~~~~~s~~~l~~a~~~~G~~v~~~d~~ 41 (316)
T 1gsa_A 2 IKLGIVMDPIANINIKKDSSFAMLLEAQRRGYELHYMEMG 41 (316)
T ss_dssp CEEEEECSCGGGCCTTTCHHHHHHHHHHHTTCEEEEECGG
T ss_pred ceEEEEeCcHHhCCcCCChHHHHHHHHHHCCCEEEEEchh
Confidence 589999887422 1234577999999999999998764
No 187
>2vo1_A CTP synthase 1; pyrimidine biosynthesis, glutamine amidotransferase, phosphorylation, amidotransferase, cytidine 5-prime triphos synthetase, UTP; 2.8A {Homo sapiens} SCOP: c.37.1.10 PDB: 3ihl_A*
Probab=28.40 E-value=63 Score=28.80 Aligned_cols=40 Identities=18% Similarity=0.254 Sum_probs=33.0
Q ss_pred CCEEEEEcCCCC---CCHHHHHHHHHHHHhCCCeEEEEeCCcc
Q 011792 6 VPHVVLLPFPAY---GHIKPMLSLAKLFSHAGFRITFVNTDQY 45 (477)
Q Consensus 6 ~~~il~~~~~~~---GHv~p~l~La~~L~~rGH~Vt~~~~~~~ 45 (477)
.||.+|++.|.- |-=.-...|+..|..||++||..=-+++
T Consensus 22 ~~KyIfVTGGVvS~lGKGi~aaSlg~lLk~~G~~Vt~~K~DPY 64 (295)
T 2vo1_A 22 SMKYILVTGGVISGIGKGIIASSVGTILKSCGLHVTSIKIDPY 64 (295)
T ss_dssp CCEEEEEEECSSSSSSHHHHHHHHHHHHHHTTCCEEEEEEECS
T ss_pred cceEEEEcCCcccccccHHHHHHHHHHHHHCCCcceeeecccc
Confidence 489999998744 5667889999999999999999865444
No 188
>3l7i_A Teichoic acid biosynthesis protein F; GT-B fold, monotopic membrane protein, structural protein; 2.70A {Staphylococcus epidermidis} PDB: 3l7j_A 3l7k_A* 3l7l_A* 3l7m_A*
Probab=28.33 E-value=43 Score=34.81 Aligned_cols=107 Identities=9% Similarity=0.038 Sum_probs=71.8
Q ss_pred eccCHHHHHhcccccccccccCchhHHHHhhcCCceecCCccchhhhhHHHHhhhhceeeecc------CCCCHHHHHHH
Q 011792 353 SWAPQEEVLAHQAIGGFLTHSGWNSTLESMVAGVPMICWPQVGDQQVNSRCVSEIWKIGFDMK------DTCDRSTIEKL 426 (477)
Q Consensus 353 ~~~p~~~ll~~~~~~~~I~HGG~gs~~eal~~GvP~l~~P~~~DQ~~na~rv~~~~G~G~~l~------~~~~~~~l~~~ 426 (477)
++.+-.++|..+|+ +||= =.+.+.|.+..++|+|....-.|++..- ..|.=..+. .-.|.++|.++
T Consensus 605 ~~~di~~ll~~aD~--lITD-ySSv~fD~~~l~kPiif~~~D~~~Y~~~-----~rg~y~d~~~~~pg~~~~~~~eL~~~ 676 (729)
T 3l7i_A 605 NYNDVSELFLISDC--LITD-YSSVMFDYGILKRPQFFFAYDIDKYDKG-----LRGFYMNYMEDLPGPIYTEPYGLAKE 676 (729)
T ss_dssp TCSCHHHHHHTCSE--EEES-SCTHHHHHGGGCCCEEEECTTTTTTTSS-----CCSBSSCTTSSSSSCEESSHHHHHHH
T ss_pred CCcCHHHHHHHhCE--EEee-chHHHHhHHhhCCCEEEecCCHHHHhhc-----cCCcccChhHhCCCCeECCHHHHHHH
Confidence 45567789988887 9997 4678899999999999987766665321 123322221 13678999999
Q ss_pred HHHHHhHhHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHH
Q 011792 427 VRDLMDNKRDKIMESTVQIAKMARDAVKEGGSSYRNLEKLIED 469 (477)
Q Consensus 427 v~~ll~~~~~~~~~~a~~l~~~~~~~~~~gg~~~~~~~~~i~~ 469 (477)
|..+..+. ..|+++.+++.+.+-.. +.|.++.+.++.+++.
T Consensus 677 i~~~~~~~-~~~~~~~~~~~~~~~~~-~dg~as~ri~~~i~~~ 717 (729)
T 3l7i_A 677 LKNLDKVQ-QQYQEKIDAFYDRFCSV-DNGKASQYIGDLIHKD 717 (729)
T ss_dssp HTTHHHHH-HHTHHHHHHHHHHHSTT-CCSCHHHHHHHHHHHH
T ss_pred Hhhhhccc-hhHHHHHHHHHHHhCCc-cCChHHHHHHHHHHhc
Confidence 99887621 67888888888887543 3355554444444443
No 189
>2hy5_B Intracellular sulfur oxidation protein DSRF; DSRE, DSRF, sulfur, structural genomics, PSI, protein initiative, berkeley structural genomics center, BSGC, TRAN; 1.72A {Allochromatium vinosum} SCOP: c.114.1.1 PDB: 2hyb_B
Probab=28.20 E-value=1.2e+02 Score=23.63 Aligned_cols=37 Identities=16% Similarity=0.110 Sum_probs=27.1
Q ss_pred EEEEcCCCCCCHHH--HHHHHHHHHhCCCeEEEEeCCcc
Q 011792 9 VVLLPFPAYGHIKP--MLSLAKLFSHAGFRITFVNTDQY 45 (477)
Q Consensus 9 il~~~~~~~GHv~p--~l~La~~L~~rGH~Vt~~~~~~~ 45 (477)
++++..+.+|+... .+.+|..+...||+|.++...+-
T Consensus 9 ~ivv~~~P~g~~~~~~al~~a~a~~a~~~~v~Vff~~DG 47 (136)
T 2hy5_B 9 MYLNRKAPYGTIYAWEALEVVLIGAAFDQDVCVLFLDDG 47 (136)
T ss_dssp EEEECSCTTTSSHHHHHHHHHHHHGGGCCEEEEEECGGG
T ss_pred EEEEeCCCCCcHHHHHHHHHHHHHHhCCCCEEEEEEhHH
Confidence 34445567787655 46669999999999999987543
No 190
>3kkl_A Probable chaperone protein HSP33; peptidase, heat shock protein, hydrolase, protease, stress response; 2.03A {Saccharomyces cerevisiae} PDB: 3mii_A*
Probab=28.06 E-value=97 Score=27.09 Aligned_cols=37 Identities=19% Similarity=0.315 Sum_probs=27.3
Q ss_pred CEEEEEcCCCCCC----------H-HHHHHHHHHHHhCCCeEEEEeCC
Q 011792 7 PHVVLLPFPAYGH----------I-KPMLSLAKLFSHAGFRITFVNTD 43 (477)
Q Consensus 7 ~~il~~~~~~~GH----------v-~p~l~La~~L~~rGH~Vt~~~~~ 43 (477)
+||+++.....+. . .=+....+.|.+.|++|+++++.
T Consensus 4 ~kvlivlt~~~~~~~~~g~~tG~~~~E~~~p~~~l~~aG~~V~iaS~~ 51 (244)
T 3kkl_A 4 KRALISLTSYHGPFYKDGAKTGVFVVEILRSFDTFEKHGFEVDFVSET 51 (244)
T ss_dssp CEEEEECCCCCCCCSTTSCCCCBCHHHHHHHHHHHHTTTCEEEEEESS
T ss_pred CEEEEEECCCCcccCCCCCcCcccHHHHHHHHHHHHHCCCEEEEEeCC
Confidence 5888887754221 1 34677788999999999999974
No 191
>1wcv_1 SOJ, segregation protein; ATPase, bacterial, chromosome segregation; 1.6A {Thermus thermophilus} PDB: 2bej_A* 2bek_A*
Probab=28.00 E-value=41 Score=29.56 Aligned_cols=43 Identities=21% Similarity=0.300 Sum_probs=29.8
Q ss_pred CCCCCCCEEEEEcC--CCCCCHHHHHHHHHHHHhCCCeEEEEeCCc
Q 011792 1 MEQTRVPHVVLLPF--PAYGHIKPMLSLAKLFSHAGFRITFVNTDQ 44 (477)
Q Consensus 1 m~~~~~~~il~~~~--~~~GHv~p~l~La~~L~~rGH~Vt~~~~~~ 44 (477)
|... +++++.+.. ||-|-..-...||..|+++|++|.++=.+.
T Consensus 1 m~~~-~~~vI~v~s~kGGvGKTt~a~~LA~~la~~g~~VlliD~D~ 45 (257)
T 1wcv_1 1 MLRA-KVRRIALANQKGGVGKTTTAINLAAYLARLGKRVLLVDLDP 45 (257)
T ss_dssp -----CCCEEEECCSSCCHHHHHHHHHHHHHHHHTTCCEEEEECCT
T ss_pred CCCC-CCEEEEEEeCCCCchHHHHHHHHHHHHHHCCCCEEEEECCC
Confidence 4433 355554443 566888889999999999999999986543
No 192
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=27.98 E-value=2.9e+02 Score=23.68 Aligned_cols=146 Identities=13% Similarity=0.058 Sum_probs=72.7
Q ss_pred cccCCCCCcEEEEEecCcccCCHHHHHHHHHHHHhCCCcEEEEEecCCcCCCCCCCCCchhhHhhh-cCCCceeeccCHH
Q 011792 280 WLGSQPSRSVLYVSFGSFIKLSGDQILEFWHGIVNSGKGFLWVIRSDLIDGESGVGPVPAELDQGT-KERGCIVSWAPQE 358 (477)
Q Consensus 280 ~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~-~~nv~~~~~~p~~ 358 (477)
|++ -.+++++.|+.|.+. ..-+..+...|..+.++-. .+.+.+.+-. ..++.+....-+.
T Consensus 26 fl~-L~gk~VLVVGgG~va-------~~ka~~Ll~~GA~VtVvap-----------~~~~~l~~l~~~~~i~~i~~~~~~ 86 (223)
T 3dfz_A 26 MLD-LKGRSVLVVGGGTIA-------TRRIKGFLQEGAAITVVAP-----------TVSAEINEWEAKGQLRVKRKKVGE 86 (223)
T ss_dssp EEC-CTTCCEEEECCSHHH-------HHHHHHHGGGCCCEEEECS-----------SCCHHHHHHHHTTSCEEECSCCCG
T ss_pred EEE-cCCCEEEEECCCHHH-------HHHHHHHHHCCCEEEEECC-----------CCCHHHHHHHHcCCcEEEECCCCH
Confidence 566 346778888887664 4455667677888766542 2222222111 1234443222223
Q ss_pred HHHhcccccccccccCchhHHHHhh----cCCceecCCccchhhhhHH-----HHhhh--hceeeeccC--CCCHHHHHH
Q 011792 359 EVLAHQAIGGFLTHSGWNSTLESMV----AGVPMICWPQVGDQQVNSR-----CVSEI--WKIGFDMKD--TCDRSTIEK 425 (477)
Q Consensus 359 ~ll~~~~~~~~I~HGG~gs~~eal~----~GvP~l~~P~~~DQ~~na~-----rv~~~--~G~G~~l~~--~~~~~~l~~ 425 (477)
..|..+++ +|.--|.-.+.+.++ .|+|+-++ |.+..+. .+ ++ +-+|+.-.+ ..-+..|++
T Consensus 87 ~dL~~adL--VIaAT~d~~~N~~I~~~ak~gi~VNvv----D~p~~~~f~~Paiv-~rg~l~iaIST~G~sP~la~~iR~ 159 (223)
T 3dfz_A 87 EDLLNVFF--IVVATNDQAVNKFVKQHIKNDQLVNMA----SSFSDGNIQIPAQF-SRGRLSLAISTDGASPLLTKRIKE 159 (223)
T ss_dssp GGSSSCSE--EEECCCCTHHHHHHHHHSCTTCEEEC---------CCSEECCEEE-EETTEEEEEECTTSCHHHHHHHHH
T ss_pred hHhCCCCE--EEECCCCHHHHHHHHHHHhCCCEEEEe----CCcccCeEEEeeEE-EeCCEEEEEECCCCCcHHHHHHHH
Confidence 34555555 887777655544433 46665443 3333321 11 11 233333321 222466677
Q ss_pred HHHHHHhHhHHHHHHHHHHHHHHHHH
Q 011792 426 LVRDLMDNKRDKIMESTVQIAKMARD 451 (477)
Q Consensus 426 ~v~~ll~~~~~~~~~~a~~l~~~~~~ 451 (477)
.|..++...-..+-+.+.++.+.+++
T Consensus 160 ~ie~~lp~~~~~~~~~~~~~R~~vk~ 185 (223)
T 3dfz_A 160 DLSSNYDESYTQYTQFLYECRVLIHR 185 (223)
T ss_dssp HHHHHSCTHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHccHHHHHHHHHHHHHHHHHHH
Confidence 77666653224566666666666665
No 193
>3oti_A CALG3; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD C0T; 1.60A {Micromonospora echinospora} PDB: 3d0q_A* 3d0r_A*
Probab=27.55 E-value=3e+02 Score=25.47 Aligned_cols=90 Identities=12% Similarity=0.004 Sum_probs=55.2
Q ss_pred CEEEEEcCCCCC----CHHHHHHHHHHHHhCCCeEEEEeCCccchhccCCCcccccccCCCCeEEEeCCCCCCCCCCCCC
Q 011792 7 PHVVLLPFPAYG----HIKPMLSLAKLFSHAGFRITFVNTDQYHDRLFGNTDVTAFYKHFPNFLCTSIPDGLPPDNPRFG 82 (477)
Q Consensus 7 ~~il~~~~~~~G----Hv~p~l~La~~L~~rGH~Vt~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 82 (477)
.++++++.|+.+ ....+..+.+.|.+.+.+|++++.....+.+.. ..+++.+..+
T Consensus 232 ~~~v~v~~G~~~~~~~~~~~~~~~~~~l~~~~~~~v~~~g~~~~~~l~~---------~~~~v~~~~~------------ 290 (398)
T 3oti_A 232 RPEVAITMGTIELQAFGIGAVEPIIAAAGEVDADFVLALGDLDISPLGT---------LPRNVRAVGW------------ 290 (398)
T ss_dssp SCEEEECCTTTHHHHHCGGGHHHHHHHHHTSSSEEEEECTTSCCGGGCS---------CCTTEEEESS------------
T ss_pred CCEEEEEcCCCccccCcHHHHHHHHHHHHcCCCEEEEEECCcChhhhcc---------CCCcEEEEcc------------
Confidence 357788888772 345578889999988999988887543222211 0112322211
Q ss_pred CChHHHHHhhchhcHHHHHHHHhcCCCCCeEEEECCCcchHHHHHHHcCCCeEEE
Q 011792 83 IYTKDWFCSNKPVSKLAFRQLLMTPGRLPTCIISDSIMSFAIDVAEELNIPIITF 137 (477)
Q Consensus 83 ~~~~~~~~~~~~~~~~~l~~~l~~~~~~~D~vI~D~~~~~~~~~A~~lgiP~v~~ 137 (477)
. .+.+++. ..|++|+.... ....=|-..|+|+|.+
T Consensus 291 -------------~--~~~~ll~----~ad~~v~~~G~-~t~~Eal~~G~P~v~~ 325 (398)
T 3oti_A 291 -------------T--PLHTLLR----TCTAVVHHGGG-GTVMTAIDAGIPQLLA 325 (398)
T ss_dssp -------------C--CHHHHHT----TCSEEEECCCH-HHHHHHHHHTCCEEEC
T ss_pred -------------C--CHHHHHh----hCCEEEECCCH-HHHHHHHHhCCCEEEc
Confidence 0 1234444 47999987643 4566677789999985
No 194
>3h4t_A Glycosyltransferase GTFA, glycosyltransferase; vancomycin, teicoplanin, ORF1, natural products, antibiotic; HET: UDP; 1.15A {Amycolatopsis orientalis} SCOP: c.87.1.5 PDB: 3h4i_A* 1pn3_A* 1pnv_A*
Probab=27.39 E-value=2.6e+02 Score=26.08 Aligned_cols=88 Identities=9% Similarity=0.001 Sum_probs=54.8
Q ss_pred EEEEEcCCCCC-CHHHHHHHHHHHHhCCCeEEEEeCCccchhccCCCcccccccCCCCeEEEeCCCCCCCCCCCCCCChH
Q 011792 8 HVVLLPFPAYG-HIKPMLSLAKLFSHAGFRITFVNTDQYHDRLFGNTDVTAFYKHFPNFLCTSIPDGLPPDNPRFGIYTK 86 (477)
Q Consensus 8 ~il~~~~~~~G-Hv~p~l~La~~L~~rGH~Vt~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 86 (477)
++++++.|+.+ .-..+..+.+.|.+.|.+|.+.+.....+.. ...+++.+..+
T Consensus 222 ~~Vlv~~Gs~~~~~~~~~~~~~al~~~~~~vv~~~g~~~~~~~----------~~~~~v~~~~~---------------- 275 (404)
T 3h4t_A 222 PPVYVGFGSGPAPAEAARVAIEAVRAQGRRVVLSSGWAGLGRI----------DEGDDCLVVGE---------------- 275 (404)
T ss_dssp CCEEECCTTSCCCTTHHHHHHHHHHHTTCCEEEECTTTTCCCS----------SCCTTEEEESS----------------
T ss_pred CeEEEECCCCCCcHHHHHHHHHHHHhCCCEEEEEeCCcccccc----------cCCCCEEEecC----------------
Confidence 56788888877 5556778888998889999888764321110 00122322211
Q ss_pred HHHHhhchhcHHHHHHHHhcCCCCCeEEEECCCcchHHHHHHHcCCCeEEE
Q 011792 87 DWFCSNKPVSKLAFRQLLMTPGRLPTCIISDSIMSFAIDVAEELNIPIITF 137 (477)
Q Consensus 87 ~~~~~~~~~~~~~l~~~l~~~~~~~D~vI~D~~~~~~~~~A~~lgiP~v~~ 137 (477)
. + ..+++. +.|++|+..-. ....-|-..|+|++.+
T Consensus 276 ------~----~-~~~ll~----~~d~~v~~gG~-~t~~Eal~~GvP~v~~ 310 (404)
T 3h4t_A 276 ------V----N-HQVLFG----RVAAVVHHGGA-GTTTAVTRAGAPQVVV 310 (404)
T ss_dssp ------C----C-HHHHGG----GSSEEEECCCH-HHHHHHHHHTCCEEEC
T ss_pred ------C----C-HHHHHh----hCcEEEECCcH-HHHHHHHHcCCCEEEc
Confidence 0 0 133333 68999998843 4555667789999986
No 195
>3k9g_A PF-32 protein; ssgcid, SBRI, decode biostructures, UW, NIH, niaid, borellia burgdorferi, plasmid partition protein, iodide; 2.25A {Borrelia burgdorferi} PDB: 3k9h_A
Probab=27.37 E-value=47 Score=29.27 Aligned_cols=38 Identities=18% Similarity=0.380 Sum_probs=29.9
Q ss_pred CCEEEEEcC--CCCCCHHHHHHHHHHHHhCCCeEEEEeCCc
Q 011792 6 VPHVVLLPF--PAYGHIKPMLSLAKLFSHAGFRITFVNTDQ 44 (477)
Q Consensus 6 ~~~il~~~~--~~~GHv~p~l~La~~L~~rGH~Vt~~~~~~ 44 (477)
+++++.+.. ||-|=..-...||..|+ +|++|.++=.+.
T Consensus 26 ~~~vI~v~s~kGGvGKTT~a~~LA~~la-~g~~VlliD~D~ 65 (267)
T 3k9g_A 26 KPKIITIASIKGGVGKSTSAIILATLLS-KNNKVLLIDMDT 65 (267)
T ss_dssp CCEEEEECCSSSSSCHHHHHHHHHHHHT-TTSCEEEEEECT
T ss_pred CCeEEEEEeCCCCchHHHHHHHHHHHHH-CCCCEEEEECCC
Confidence 356655544 67788899999999999 999999996543
No 196
>4grd_A N5-CAIR mutase, phosphoribosylaminoimidazole carboxylase catalyti; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures; 1.85A {Burkholderia cenocepacia}
Probab=27.19 E-value=2.6e+02 Score=22.90 Aligned_cols=143 Identities=11% Similarity=0.046 Sum_probs=78.5
Q ss_pred CCcEEEEEecCcccCCHHHHHHHHHHHHhCCCcEEEEEecCCcCCCCCCCCCchhhHhhhcCCCceeeccCHHHHHhccc
Q 011792 286 SRSVLYVSFGSFIKLSGDQILEFWHGIVNSGKGFLWVIRSDLIDGESGVGPVPAELDQGTKERGCIVSWAPQEEVLAHQA 365 (477)
Q Consensus 286 ~~~~v~vs~Gs~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~~p~~~ll~~~~ 365 (477)
..|.|-|-+||.. +-...+.....++.++..+-+.+. +.+..|+.+.+- ..-.....
T Consensus 11 ~~P~V~IimGS~S--D~~v~~~a~~~l~~~gi~~ev~V~--------saHR~p~~l~~~-------------~~~a~~~g 67 (173)
T 4grd_A 11 SAPLVGVLMGSSS--DWDVMKHAVAILQEFGVPYEAKVV--------SAHRMPDEMFDY-------------AEKARERG 67 (173)
T ss_dssp SSCSEEEEESSGG--GHHHHHHHHHHHHHTTCCEEEEEC--------CTTTSHHHHHHH-------------HHHHTTTT
T ss_pred CCCeEEEEeCcHh--HHHHHHHHHHHHHHcCCCEEEEEE--------ccccCHHHHHHH-------------HHHHHhcC
Confidence 4566888888874 677788888999999988766663 223445433210 00011123
Q ss_pred ccccccccCch----hHHHHhhcCCceecCCccch---hhh-hHHHHhhhhceeeecc--C---CCCHHHHHHHHHHHHh
Q 011792 366 IGGFLTHSGWN----STLESMVAGVPMICWPQVGD---QQV-NSRCVSEIWKIGFDMK--D---TCDRSTIEKLVRDLMD 432 (477)
Q Consensus 366 ~~~~I~HGG~g----s~~eal~~GvP~l~~P~~~D---Q~~-na~rv~~~~G~G~~l~--~---~~~~~~l~~~v~~ll~ 432 (477)
++++|.=.|.- ++..+ ..-+|+|.+|.... ..+ ....+.---|+.+-.- + .+++.-++..|.. +.
T Consensus 68 ~~ViIa~AG~aahLpgvvA~-~t~~PVIgVPv~~~~l~G~dsLlSivqMP~Gvpvatv~i~~~~a~NAallA~~ILa-~~ 145 (173)
T 4grd_A 68 LRAIIAGAGGAAHLPGMLAA-KTTVPVLGVPVASKYLKGVDSLHSIVQMPKGVPVATFAIGEAGAANAALFAVSILS-GN 145 (173)
T ss_dssp CSEEEEEEESSCCHHHHHHH-HCCSCEEEEEECCTTTTTHHHHHHHHCCCTTSCCEECCSSHHHHHHHHHHHHHHHT-TS
T ss_pred CeEEEEeccccccchhhhee-cCCCCEEEEEcCCCCCCchhHHHHHHhCCCCCCceEEecCCcchHHHHHHHHHHHc-CC
Confidence 34477665542 44444 44789999997543 222 1122211124433221 1 2333344433332 23
Q ss_pred HhHHHHHHHHHHHHHHHHHHHHc
Q 011792 433 NKRDKIMESTVQIAKMARDAVKE 455 (477)
Q Consensus 433 ~~~~~~~~~a~~l~~~~~~~~~~ 455 (477)
| ++++++.+.++++.++.+.+
T Consensus 146 d--~~l~~kl~~~r~~~~~~v~~ 166 (173)
T 4grd_A 146 S--VDYANRLAAFRVRQNEAAHA 166 (173)
T ss_dssp C--HHHHHHHHHHHHHHHHHHHH
T ss_pred C--HHHHHHHHHHHHHHHHHHHc
Confidence 5 88999999988888776443
No 197
>1p9o_A Phosphopantothenoylcysteine synthetase; ligase; 2.30A {Homo sapiens} SCOP: c.72.3.1
Probab=27.17 E-value=40 Score=30.90 Aligned_cols=23 Identities=22% Similarity=0.343 Sum_probs=19.9
Q ss_pred HHHHHHHHHHhCCCeEEEEeCCc
Q 011792 22 PMLSLAKLFSHAGFRITFVNTDQ 44 (477)
Q Consensus 22 p~l~La~~L~~rGH~Vt~~~~~~ 44 (477)
.-.++|+++.++|++|+++..+.
T Consensus 67 mG~aiAe~~~~~Ga~V~lv~g~~ 89 (313)
T 1p9o_A 67 RGATSAEAFLAAGYGVLFLYRAR 89 (313)
T ss_dssp HHHHHHHHHHHTTCEEEEEEETT
T ss_pred HHHHHHHHHHHCCCEEEEEecCC
Confidence 55689999999999999998753
No 198
>3bul_A Methionine synthase; transferase, reactivation conformation, cobalamin, intermodular interactions, amino-acid biosynthesis, cobalt; HET: B12; 2.30A {Escherichia coli} SCOP: a.46.1.1 c.23.6.1 d.173.1.1 PDB: 3iv9_A* 3iva_A* 1k7y_A* 1k98_A* 1bmt_A*
Probab=27.12 E-value=60 Score=32.62 Aligned_cols=44 Identities=7% Similarity=0.003 Sum_probs=37.9
Q ss_pred CCEEEEEcCCCCCCHHHHHHHHHHHHhCCCeEEEEeCCccchhc
Q 011792 6 VPHVVLLPFPAYGHIKPMLSLAKLFSHAGFRITFVNTDQYHDRL 49 (477)
Q Consensus 6 ~~~il~~~~~~~GHv~p~l~La~~L~~rGH~Vt~~~~~~~~~~l 49 (477)
+.+|++.+.++-.|-....-++..|..+|++|+.+....-.+.+
T Consensus 98 ~~kVLlatv~GD~HdiG~~iva~~L~~~G~eVi~LG~~vP~e~i 141 (579)
T 3bul_A 98 NGKMVIATVKGDVHDIGKNIVGVVLQCNNYEIVDLGVMVPAEKI 141 (579)
T ss_dssp SCEEEEEEBTTCCCCHHHHHHHHHHHTTTCEEEECCSSBCHHHH
T ss_pred CCeEEEEECCCCCchHHHHHHHHHHHHCCCEEEECCCCCCHHHH
Confidence 57999999999999999999999999999999998765433343
No 199
>4gi5_A Quinone reductase; protein structure initiative, FAD bound, structural genomics, PSI-biology; HET: FAD; 1.75A {Klebsiella pneumoniae subsp}
Probab=27.10 E-value=97 Score=27.78 Aligned_cols=36 Identities=14% Similarity=0.167 Sum_probs=23.8
Q ss_pred CCEEEEEcC-CCCCCHHH--HHHHHHHHHhCCCeEEEEe
Q 011792 6 VPHVVLLPF-PAYGHIKP--MLSLAKLFSHAGFRITFVN 41 (477)
Q Consensus 6 ~~~il~~~~-~~~GHv~p--~l~La~~L~~rGH~Vt~~~ 41 (477)
.|||+++-. |-..-.+- .-.+.+.|.++||+|+++-
T Consensus 22 ~MKiLII~aHP~~~S~n~aL~~~~~~~l~~~G~eV~v~D 60 (280)
T 4gi5_A 22 SMKVLLIYAHPEPRSLNGALKNFAIRHLQQAGHEVQVSD 60 (280)
T ss_dssp CCEEEEEECCSCTTSHHHHHHHHHHHHHHHTTCEEEEEE
T ss_pred CCeEEEEEeCCCCccHHHHHHHHHHHHHHHCCCeEEEEE
Confidence 488877754 43333333 2346778889999999973
No 200
>3hdg_A Uncharacterized protein; two-component sensor activity, response regulator, PSI-II, 11227F, NYSGXRC, structural genomics; 2.27A {Wolinella succinogenes} SCOP: c.23.1.0
Probab=26.92 E-value=1.3e+02 Score=22.53 Aligned_cols=48 Identities=8% Similarity=0.104 Sum_probs=35.4
Q ss_pred cCCceecCCccchhhhhHHHHhhhhceeeeccCCCCHHHHHHHHHHHHhH
Q 011792 384 AGVPMICWPQVGDQQVNSRCVSEIWKIGFDMKDTCDRSTIEKLVRDLMDN 433 (477)
Q Consensus 384 ~GvP~l~~P~~~DQ~~na~rv~~~~G~G~~l~~~~~~~~l~~~v~~ll~~ 433 (477)
..+|+|++--..+.......+ + .|+--.+.+.++.++|.++|+++++.
T Consensus 78 ~~~~ii~~s~~~~~~~~~~~~-~-~g~~~~l~kP~~~~~l~~~i~~~~~~ 125 (137)
T 3hdg_A 78 AKPYVIVISAFSEMKYFIKAI-E-LGVHLFLPKPIEPGRLMETLEDFRHI 125 (137)
T ss_dssp CCCEEEECCCCCCHHHHHHHH-H-HCCSEECCSSCCHHHHHHHHHHHHHH
T ss_pred CCCcEEEEecCcChHHHHHHH-h-CCcceeEcCCCCHHHHHHHHHHHHHH
Confidence 467888776655544433333 4 68777777899999999999999985
No 201
>2qyt_A 2-dehydropantoate 2-reductase; APC81190, porphyromonas gingi W83, structural genomics, PSI-2; HET: MSE; 2.15A {Porphyromonas gingivalis}
Probab=26.87 E-value=23 Score=32.23 Aligned_cols=36 Identities=11% Similarity=0.306 Sum_probs=25.5
Q ss_pred CCCCCCCEEEEEcCCCCCCHHHHHHHHHHHHhC-----C-CeEEEEeC
Q 011792 1 MEQTRVPHVVLLPFPAYGHIKPMLSLAKLFSHA-----G-FRITFVNT 42 (477)
Q Consensus 1 m~~~~~~~il~~~~~~~GHv~p~l~La~~L~~r-----G-H~Vt~~~~ 42 (477)
|... +|||+|+-.|..| ..+|..|.+. | |+|+++..
T Consensus 4 m~~~-~m~I~iiG~G~mG-----~~~a~~L~~~~~~~~g~~~V~~~~r 45 (317)
T 2qyt_A 4 MNQQ-PIKIAVFGLGGVG-----GYYGAMLALRAAATDGLLEVSWIAR 45 (317)
T ss_dssp ---C-CEEEEEECCSHHH-----HHHHHHHHHHHHHTTSSEEEEEECC
T ss_pred CCCC-CCEEEEECcCHHH-----HHHHHHHHhCccccCCCCCEEEEEc
Confidence 4443 5799998665555 3668888888 9 99999865
No 202
>2an1_A Putative kinase; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG, transferase; 2.00A {Salmonella typhimurium}
Probab=26.59 E-value=29 Score=31.34 Aligned_cols=31 Identities=10% Similarity=0.082 Sum_probs=24.5
Q ss_pred HHhcccccccccccCchhHHHHhhc----CCceecCC
Q 011792 360 VLAHQAIGGFLTHSGWNSTLESMVA----GVPMICWP 392 (477)
Q Consensus 360 ll~~~~~~~~I~HGG~gs~~eal~~----GvP~l~~P 392 (477)
+-..+++ +|.=||=||+.+++.. ++|++.++
T Consensus 60 ~~~~~D~--vi~~GGDGT~l~a~~~~~~~~~P~lGI~ 94 (292)
T 2an1_A 60 IGQQADL--AVVVGGDGNMLGAARTLARYDINVIGIN 94 (292)
T ss_dssp HHHHCSE--EEECSCHHHHHHHHHHHTTSSCEEEEBC
T ss_pred cccCCCE--EEEEcCcHHHHHHHHHhhcCCCCEEEEE
Confidence 3334555 9999999999999753 78988886
No 203
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=26.53 E-value=91 Score=26.04 Aligned_cols=33 Identities=12% Similarity=0.174 Sum_probs=23.4
Q ss_pred CEEEEEcCCCCCCHHHHHHHHHHHHhCCCeEEEEeCC
Q 011792 7 PHVVLLPFPAYGHIKPMLSLAKLFSHAGFRITFVNTD 43 (477)
Q Consensus 7 ~~il~~~~~~~GHv~p~l~La~~L~~rGH~Vt~~~~~ 43 (477)
|||++. |+.|.+- ..|+++|.++||+|+.+.-.
T Consensus 1 MkvlVt--GatG~iG--~~l~~~L~~~g~~V~~~~R~ 33 (221)
T 3ew7_A 1 MKIGII--GATGRAG--SRILEEAKNRGHEVTAIVRN 33 (221)
T ss_dssp CEEEEE--TTTSHHH--HHHHHHHHHTTCEEEEEESC
T ss_pred CeEEEE--cCCchhH--HHHHHHHHhCCCEEEEEEcC
Confidence 465544 3335443 57899999999999998763
No 204
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=26.52 E-value=74 Score=28.15 Aligned_cols=32 Identities=19% Similarity=0.390 Sum_probs=24.1
Q ss_pred CCEEEEEcCCCCCCHHHHHHHHHHHHhCCCeEEEEeC
Q 011792 6 VPHVVLLPFPAYGHIKPMLSLAKLFSHAGFRITFVNT 42 (477)
Q Consensus 6 ~~~il~~~~~~~GHv~p~l~La~~L~~rGH~Vt~~~~ 42 (477)
.++|++. |+ |-+ -..|++.|.++||+|+.+.-
T Consensus 3 ~~~ilVt--Ga-G~i--G~~l~~~L~~~g~~V~~~~r 34 (286)
T 3gpi_A 3 LSKILIA--GC-GDL--GLELARRLTAQGHEVTGLRR 34 (286)
T ss_dssp CCCEEEE--CC-SHH--HHHHHHHHHHTTCCEEEEEC
T ss_pred CCcEEEE--CC-CHH--HHHHHHHHHHCCCEEEEEeC
Confidence 3577766 34 643 45789999999999999975
No 205
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=26.43 E-value=42 Score=29.93 Aligned_cols=31 Identities=13% Similarity=0.076 Sum_probs=23.6
Q ss_pred CEEEEEcCCCCCCHHHHHHHHHHHHhCCCeEEEEeC
Q 011792 7 PHVVLLPFPAYGHIKPMLSLAKLFSHAGFRITFVNT 42 (477)
Q Consensus 7 ~~il~~~~~~~GHv~p~l~La~~L~~rGH~Vt~~~~ 42 (477)
|||+|+-.|.-| ..+|..|.++||+|+++..
T Consensus 1 m~i~iiG~G~~G-----~~~a~~l~~~g~~V~~~~r 31 (291)
T 1ks9_A 1 MKITVLGCGALG-----QLWLTALCKQGHEVQGWLR 31 (291)
T ss_dssp CEEEEECCSHHH-----HHHHHHHHHTTCEEEEECS
T ss_pred CeEEEECcCHHH-----HHHHHHHHhCCCCEEEEEc
Confidence 477777554433 4789999999999999865
No 206
>3d3j_A Enhancer of mRNA-decapping protein 3; HEDC3, phosphoprotein, protein binding; 2.80A {Homo sapiens}
Probab=25.99 E-value=40 Score=30.81 Aligned_cols=33 Identities=18% Similarity=0.265 Sum_probs=26.8
Q ss_pred CEEEEEcCCCC--CCHHHHHHHHHHHHhCCCeEEEEeC
Q 011792 7 PHVVLLPFPAY--GHIKPMLSLAKLFSHAGFRITFVNT 42 (477)
Q Consensus 7 ~~il~~~~~~~--GHv~p~l~La~~L~~rGH~Vt~~~~ 42 (477)
.+|++++.++- |+ -+.+|+.|..+|++|+++..
T Consensus 133 ~~vlVlcG~GNNGGD---Glv~AR~L~~~G~~V~V~~~ 167 (306)
T 3d3j_A 133 PTVALLCGPHVKGAQ---GISCGRHLANHDVQVILFLP 167 (306)
T ss_dssp CEEEEEECSSHHHHH---HHHHHHHHHHTTCEEEEECC
T ss_pred CeEEEEECCCCCHHH---HHHHHHHHHHCCCcEEEEEe
Confidence 48999988664 33 37899999999999999865
No 207
>1jzt_A Hypothetical 27.5 kDa protein in SPX19-GCR2 inter region; yeast hypothetical protein, structural genomics, selenomethi PSI; 1.94A {Saccharomyces cerevisiae} SCOP: c.104.1.1
Probab=25.89 E-value=41 Score=29.62 Aligned_cols=33 Identities=21% Similarity=0.301 Sum_probs=26.6
Q ss_pred CEEEEEcCCCC--CCHHHHHHHHHHHHhCCCeEEEEeC
Q 011792 7 PHVVLLPFPAY--GHIKPMLSLAKLFSHAGFRITFVNT 42 (477)
Q Consensus 7 ~~il~~~~~~~--GHv~p~l~La~~L~~rGH~Vt~~~~ 42 (477)
.+|++++.++- |+ -+.+|+.|.++|++|+++..
T Consensus 59 ~~v~VlcG~GNNGGD---Glv~AR~L~~~G~~V~v~~~ 93 (246)
T 1jzt_A 59 KHVFVIAGPGNNGGD---GLVCARHLKLFGYNPVVFYP 93 (246)
T ss_dssp CEEEEEECSSHHHHH---HHHHHHHHHHTTCCEEEECC
T ss_pred CeEEEEECCCCCHHH---HHHHHHHHHHCCCeEEEEEc
Confidence 48999888754 33 37899999999999999865
No 208
>3of5_A Dethiobiotin synthetase; structural genomics, center for structural genomics of infec diseases, csgid, ligase; 1.52A {Francisella tularensis subsp}
Probab=25.87 E-value=63 Score=27.90 Aligned_cols=36 Identities=8% Similarity=0.060 Sum_probs=28.7
Q ss_pred CCEEEEEcC--CCCCCHHHHHHHHHHHHhCCCeEEEEe
Q 011792 6 VPHVVLLPF--PAYGHIKPMLSLAKLFSHAGFRITFVN 41 (477)
Q Consensus 6 ~~~il~~~~--~~~GHv~p~l~La~~L~~rGH~Vt~~~ 41 (477)
+|+.++++. ++-|-..-...|++.|+++|++|.++=
T Consensus 3 ~mk~i~Itgt~t~vGKT~vt~~L~~~l~~~G~~V~~~K 40 (228)
T 3of5_A 3 AMKKFFIIGTDTEVGKTYISTKLIEVCEHQNIKSLCLK 40 (228)
T ss_dssp TCEEEEEEESSSSSCHHHHHHHHHHHHHHTTCCEEEEC
T ss_pred CCcEEEEEeCCCCCCHHHHHHHHHHHHHHCCCeeEEec
Confidence 456555555 355889999999999999999999974
No 209
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=25.82 E-value=39 Score=30.95 Aligned_cols=40 Identities=15% Similarity=0.188 Sum_probs=28.7
Q ss_pred CCEEEEEcCCCCCCHHHHHHHHHHHHhCCCeEEEEeCCccchhcc
Q 011792 6 VPHVVLLPFPAYGHIKPMLSLAKLFSHAGFRITFVNTDQYHDRLF 50 (477)
Q Consensus 6 ~~~il~~~~~~~GHv~p~l~La~~L~~rGH~Vt~~~~~~~~~~l~ 50 (477)
++||+|+-.|+.| ..+|..|++.||+|+++..+...+.+.
T Consensus 19 ~~kI~IiGaGa~G-----~~~a~~L~~~G~~V~l~~~~~~~~~i~ 58 (318)
T 3hwr_A 19 GMKVAIMGAGAVG-----CYYGGMLARAGHEVILIARPQHVQAIE 58 (318)
T ss_dssp -CEEEEESCSHHH-----HHHHHHHHHTTCEEEEECCHHHHHHHH
T ss_pred CCcEEEECcCHHH-----HHHHHHHHHCCCeEEEEEcHhHHHHHH
Confidence 6899999776655 567899999999999993333334443
No 210
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=25.82 E-value=35 Score=31.96 Aligned_cols=33 Identities=15% Similarity=0.328 Sum_probs=26.8
Q ss_pred CCEEEEEcCCCCCCHHHHHHHHHHHHhCCCeEEEEeCC
Q 011792 6 VPHVVLLPFPAYGHIKPMLSLAKLFSHAGFRITFVNTD 43 (477)
Q Consensus 6 ~~~il~~~~~~~GHv~p~l~La~~L~~rGH~Vt~~~~~ 43 (477)
+|||.|+-.|..| ..+|..|++.||+|++....
T Consensus 29 ~mkI~VIGaG~mG-----~alA~~La~~G~~V~l~~r~ 61 (356)
T 3k96_A 29 KHPIAILGAGSWG-----TALALVLARKGQKVRLWSYE 61 (356)
T ss_dssp CSCEEEECCSHHH-----HHHHHHHHTTTCCEEEECSC
T ss_pred CCeEEEECccHHH-----HHHHHHHHHCCCeEEEEeCC
Confidence 4789998776655 56899999999999998764
No 211
>1o97_C Electron transferring flavoprotein beta-subunit; FAD binding; HET: AMP FAD; 1.6A {Methylophilus methylotrophus} SCOP: c.26.2.3 PDB: 1o95_C* 1o96_A* 1o94_C* 3clr_C* 3cls_C* 3clt_C* 3clu_C*
Probab=25.64 E-value=62 Score=28.77 Aligned_cols=42 Identities=19% Similarity=0.191 Sum_probs=32.4
Q ss_pred HHHHHHHHhcCCCCCeEEEECCCcc------hHHHHHHHcCCCeEEEccC
Q 011792 97 KLAFRQLLMTPGRLPTCIISDSIMS------FAIDVAEELNIPIITFRPY 140 (477)
Q Consensus 97 ~~~l~~~l~~~~~~~D~vI~D~~~~------~~~~~A~~lgiP~v~~~~~ 140 (477)
...+.+++++. +||+||+..... .+..+|..||+|.+.....
T Consensus 101 a~~La~~i~~~--~~dlVl~G~~s~d~~~~~v~p~lA~~L~~~~vt~v~~ 148 (264)
T 1o97_C 101 GRILTEVIKKE--APDMVFAGVQSSDQAYASTGISVASYLNWPHAAVVAD 148 (264)
T ss_dssp HHHHHHHHHHH--CCSEEEEESCCTTTCCCCHHHHHHHHHTCCEEEEEEE
T ss_pred HHHHHHHHHhc--CCCEEEEcCCccCCchhhHHHHHHHHhCCCcccceEE
Confidence 34556666655 799999988764 6889999999999987543
No 212
>3ip3_A Oxidoreductase, putative; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.14A {Thermotoga maritima}
Probab=25.55 E-value=3.3e+02 Score=24.67 Aligned_cols=60 Identities=12% Similarity=0.071 Sum_probs=39.0
Q ss_pred eeccCHHHHHhcccccccccccCchh----HHHHhhcCCceec-CCccch--hhhhHHHHhhhhcee
Q 011792 352 VSWAPQEEVLAHQAIGGFLTHSGWNS----TLESMVAGVPMIC-WPQVGD--QQVNSRCVSEIWKIG 411 (477)
Q Consensus 352 ~~~~p~~~ll~~~~~~~~I~HGG~gs----~~eal~~GvP~l~-~P~~~D--Q~~na~rv~~~~G~G 411 (477)
.-+-...++|..+++++|+--.-..+ +.+|+.+|+++++ -|+..+ +-.-...++++.|.-
T Consensus 54 ~~~~~~~~ll~~~~vD~V~I~tp~~~H~~~~~~al~aGkhVl~EKPla~~~~ea~~l~~~a~~~g~~ 120 (337)
T 3ip3_A 54 KKYNNWWEMLEKEKPDILVINTVFSLNGKILLEALERKIHAFVEKPIATTFEDLEKIRSVYQKVRNE 120 (337)
T ss_dssp EECSSHHHHHHHHCCSEEEECSSHHHHHHHHHHHHHTTCEEEECSSSCSSHHHHHHHHHHHHHHTTT
T ss_pred cccCCHHHHhcCCCCCEEEEeCCcchHHHHHHHHHHCCCcEEEeCCCCCCHHHHHHHHHHHHHhCCc
Confidence 35667889998877777775544443 7789999999876 377653 333333444555644
No 213
>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2
Probab=25.51 E-value=1e+02 Score=26.96 Aligned_cols=39 Identities=21% Similarity=0.176 Sum_probs=25.9
Q ss_pred CCCCCCCEEEEEcCCCCCCHHHHHHHHHHHHhCCCeEEEEeC
Q 011792 1 MEQTRVPHVVLLPFPAYGHIKPMLSLAKLFSHAGFRITFVNT 42 (477)
Q Consensus 1 m~~~~~~~il~~~~~~~GHv~p~l~La~~L~~rGH~Vt~~~~ 42 (477)
|.+..+-+.++++.++ |-+ =.++++.|+++|++|+++.-
T Consensus 1 M~~m~~~k~vlVTGas-~gI--G~~ia~~l~~~G~~V~~~~r 39 (267)
T 2gdz_A 1 MAHMVNGKVALVTGAA-QGI--GRAFAEALLLKGAKVALVDW 39 (267)
T ss_dssp -CCCCTTCEEEEETTT-SHH--HHHHHHHHHHTTCEEEEEES
T ss_pred CCcccCCCEEEEECCC-CcH--HHHHHHHHHHCCCEEEEEEC
Confidence 5443233567777655 322 35789999999999998764
No 214
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=25.50 E-value=66 Score=31.90 Aligned_cols=38 Identities=11% Similarity=0.020 Sum_probs=30.1
Q ss_pred CCEEEEEcCCCCCCH--HHHHHHHHH--HHhCCCeEEEEeCC
Q 011792 6 VPHVVLLPFPAYGHI--KPMLSLAKL--FSHAGFRITFVNTD 43 (477)
Q Consensus 6 ~~~il~~~~~~~GHv--~p~l~La~~--L~~rGH~Vt~~~~~ 43 (477)
+|||+++.....+|- .-+..|++. |.++||+|++++..
T Consensus 205 ~~rI~~~~~~~~~~g~~~~~~~l~~~L~~~~~~~~v~~~~~~ 246 (568)
T 2vsy_A 205 PLRVGFVSNGFGAHPTGLLTVALFEALQRRQPDLQMHLFATS 246 (568)
T ss_dssp CEEEEEEESCSSSSHHHHHHHHHHHHHHHHCTTEEEEEEESS
T ss_pred CeEEEEECcccccChHHHHHHHHHhhccCCcccEEEEEEECC
Confidence 689999987655443 457789999 77889999999873
No 215
>3eq2_A Probable two-component response regulator; adaptor sigmas, signaling protein; 3.40A {Pseudomonas aeruginosa} PDB: 3f7a_A
Probab=25.43 E-value=3.4e+02 Score=25.15 Aligned_cols=48 Identities=17% Similarity=0.198 Sum_probs=31.7
Q ss_pred cCCceecCCccchhhhhHHHHhhhhceeeeccCCC-CHHHHHHHHHHHHhH
Q 011792 384 AGVPMICWPQVGDQQVNSRCVSEIWKIGFDMKDTC-DRSTIEKLVRDLMDN 433 (477)
Q Consensus 384 ~GvP~l~~P~~~DQ~~na~rv~~~~G~G~~l~~~~-~~~~l~~~v~~ll~~ 433 (477)
..+|+|++--..|...-...+ + .|+--.+.|.+ +.+.|.++|++++..
T Consensus 76 ~~~pii~lt~~~~~~~~~~a~-~-~ga~~yl~KP~~~~~~l~~~i~~~~~~ 124 (394)
T 3eq2_A 76 SETPIIVLSGAGVMSDAVEAL-R-LGAADYLIKPLEDLAVLEHSVRRALDR 124 (394)
T ss_dssp CCCCEEEC---CHHHHHHHHH-H-HTCSEECCSSCSCTHHHHHHHHHHHHH
T ss_pred CCCcEEEEEcCCCHHHHHHHH-h-cChhhEEECCCChHHHHHHHHHHHHhh
Confidence 467888887666654444444 4 68766676777 688999999998874
No 216
>3g1w_A Sugar ABC transporter; sugar-binding protein, bacillus halod target 11229F, transport protein, structural genomics; 2.02A {Bacillus halodurans c-125}
Probab=25.33 E-value=3.4e+02 Score=23.69 Aligned_cols=85 Identities=15% Similarity=0.232 Sum_probs=49.7
Q ss_pred CCEEEEEcCCCCCCHHH--HHHHHHHHHhCCCeEEEEeCCccchhccCCCcccccccCCCCeEEEeCCCCCCCCCCCCCC
Q 011792 6 VPHVVLLPFPAYGHIKP--MLSLAKLFSHAGFRITFVNTDQYHDRLFGNTDVTAFYKHFPNFLCTSIPDGLPPDNPRFGI 83 (477)
Q Consensus 6 ~~~il~~~~~~~GHv~p--~l~La~~L~~rGH~Vt~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 83 (477)
+.+|+++.......+.. ...+-+++.++|+++.+......
T Consensus 4 ~~~I~~i~~~~~~~~~~~~~~gi~~~a~~~g~~~~~~~~~~~-------------------------------------- 45 (305)
T 3g1w_A 4 NETYMMITFQSGMDYWKRCLKGFEDAAQALNVTVEYRGAAQY-------------------------------------- 45 (305)
T ss_dssp -CEEEEEESSTTSTHHHHHHHHHHHHHHHHTCEEEEEECSSS--------------------------------------
T ss_pred CceEEEEEccCCChHHHHHHHHHHHHHHHcCCEEEEeCCCcC--------------------------------------
Confidence 46787777665444432 34566677778999988543111
Q ss_pred ChHHHHHhhchhcHHHHHHHHhcCCCCCeEEEECCCcch----HHHHHHHcCCCeEEEcc
Q 011792 84 YTKDWFCSNKPVSKLAFRQLLMTPGRLPTCIISDSIMSF----AIDVAEELNIPIITFRP 139 (477)
Q Consensus 84 ~~~~~~~~~~~~~~~~l~~~l~~~~~~~D~vI~D~~~~~----~~~~A~~lgiP~v~~~~ 139 (477)
+... ....+..++.. ++|.||....... ....+...|||+|.+..
T Consensus 46 ~~~~--------~~~~i~~l~~~---~vdgiIi~~~~~~~~~~~~~~~~~~~iPvV~~~~ 94 (305)
T 3g1w_A 46 DIQE--------QITVLEQAIAK---NPAGIAISAIDPVELTDTINKAVDAGIPIVLFDS 94 (305)
T ss_dssp CHHH--------HHHHHHHHHHH---CCSEEEECCSSTTTTHHHHHHHHHTTCCEEEESS
T ss_pred CHHH--------HHHHHHHHHHh---CCCEEEEcCCCHHHHHHHHHHHHHCCCcEEEECC
Confidence 0000 11234444443 8999998765442 34455677999998743
No 217
>3trh_A Phosphoribosylaminoimidazole carboxylase carboxyltransferase subunit; purines, pyrimidines, nucleosides, nucleotides, lyase; 2.20A {Coxiella burnetii}
Probab=25.32 E-value=2.8e+02 Score=22.63 Aligned_cols=139 Identities=14% Similarity=0.150 Sum_probs=76.0
Q ss_pred CcEEEEEecCcccCCHHHHHHHHHHHHhCCCcEEEEEecCCcCCCCCCCCCchhhHhhhcCCCceeeccCHHHHHhcccc
Q 011792 287 RSVLYVSFGSFIKLSGDQILEFWHGIVNSGKGFLWVIRSDLIDGESGVGPVPAELDQGTKERGCIVSWAPQEEVLAHQAI 366 (477)
Q Consensus 287 ~~~v~vs~Gs~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~~p~~~ll~~~~~ 366 (477)
+|.|-|-+||.. +....+.....++.++..+-+.+.+ .+..|+.+.+ |+.. .....+
T Consensus 6 ~~~V~IimgS~S--D~~v~~~a~~~l~~~gi~~ev~V~S--------aHR~p~~~~~----------~~~~---a~~~g~ 62 (169)
T 3trh_A 6 KIFVAILMGSDS--DLSTMETAFTELKSLGIPFEAHILS--------AHRTPKETVE----------FVEN---ADNRGC 62 (169)
T ss_dssp CCEEEEEESCGG--GHHHHHHHHHHHHHTTCCEEEEECC--------TTTSHHHHHH----------HHHH---HHHTTE
T ss_pred CCcEEEEECcHH--hHHHHHHHHHHHHHcCCCEEEEEEc--------ccCCHHHHHH----------HHHH---HHhCCC
Confidence 355777777774 6777888889999999887666632 2344443321 0000 001123
Q ss_pred cccccccCch----hHHHHhhcCCceecCCccchhh-hhHHHH--hh-hhceeeec---c--CCCCHHHHHHHHHHHHhH
Q 011792 367 GGFLTHSGWN----STLESMVAGVPMICWPQVGDQQ-VNSRCV--SE-IWKIGFDM---K--DTCDRSTIEKLVRDLMDN 433 (477)
Q Consensus 367 ~~~I~HGG~g----s~~eal~~GvP~l~~P~~~DQ~-~na~rv--~~-~~G~G~~l---~--~~~~~~~l~~~v~~ll~~ 433 (477)
+++|.=.|.. ++..++ .-+|+|.+|...-.. .....+ ++ --|+.+.. + +.+++..++..|..+ .|
T Consensus 63 ~ViIa~AG~aa~LpgvvA~~-t~~PVIgVP~~~~~l~G~dsLlS~vqmp~GvPVatV~I~~a~~~nAa~lAa~Il~~-~d 140 (169)
T 3trh_A 63 AVFIAAAGLAAHLAGTIAAH-TLKPVIGVPMAGGSLGGLDALLSTVQMPGGVPVACTAIGKAGAKNAAILAAQIIAL-QD 140 (169)
T ss_dssp EEEEEEECSSCCHHHHHHHT-CSSCEEEEECCCSTTTTHHHHHHHHCCCTTSCCEECCSTHHHHHHHHHHHHHHHHT-TC
T ss_pred cEEEEECChhhhhHHHHHhc-CCCCEEEeecCCCCCCCHHHHHHhhcCCCCCceEEEecCCccchHHHHHHHHHHcC-CC
Confidence 3488877754 333332 358999999853211 111111 11 12443221 1 123444444444433 25
Q ss_pred hHHHHHHHHHHHHHHHHHH
Q 011792 434 KRDKIMESTVQIAKMARDA 452 (477)
Q Consensus 434 ~~~~~~~~a~~l~~~~~~~ 452 (477)
+.++++.+.+++.+++.
T Consensus 141 --~~l~~kl~~~r~~~~~~ 157 (169)
T 3trh_A 141 --KSIAQKLVQQRTAKRET 157 (169)
T ss_dssp --HHHHHHHHHHHHHHHHH
T ss_pred --HHHHHHHHHHHHHHHHH
Confidence 88999999998888765
No 218
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=25.32 E-value=20 Score=30.65 Aligned_cols=32 Identities=16% Similarity=0.256 Sum_probs=23.9
Q ss_pred CEEEEEcCCCCCCHHHHHHHHHHHHhCCCeEEEEeCC
Q 011792 7 PHVVLLPFPAYGHIKPMLSLAKLFSHAGFRITFVNTD 43 (477)
Q Consensus 7 ~~il~~~~~~~GHv~p~l~La~~L~~rGH~Vt~~~~~ 43 (477)
|||+++-. |. --..+|+.|.++||+|+++...
T Consensus 1 M~iiIiG~---G~--~G~~la~~L~~~g~~v~vid~~ 32 (218)
T 3l4b_C 1 MKVIIIGG---ET--TAYYLARSMLSRKYGVVIINKD 32 (218)
T ss_dssp CCEEEECC---HH--HHHHHHHHHHHTTCCEEEEESC
T ss_pred CEEEEECC---CH--HHHHHHHHHHhCCCeEEEEECC
Confidence 46777643 33 3467899999999999999763
No 219
>1u0t_A Inorganic polyphosphate/ATP-NAD kinase; alpha-beta, beta sandwich, structural genomics, PSI, protein structure initiative; 2.30A {Mycobacterium tuberculosis} SCOP: e.52.1.1 PDB: 1u0r_A 1y3i_A* 1y3h_A
Probab=25.20 E-value=23 Score=32.42 Aligned_cols=30 Identities=13% Similarity=0.141 Sum_probs=23.4
Q ss_pred hcccccccccccCchhHHHHhhc----CCceecCCc
Q 011792 362 AHQAIGGFLTHSGWNSTLESMVA----GVPMICWPQ 393 (477)
Q Consensus 362 ~~~~~~~~I~HGG~gs~~eal~~----GvP~l~~P~ 393 (477)
..+++ +|.-||=||+.+++.. ++|++.++.
T Consensus 74 ~~~d~--vi~~GGDGT~l~a~~~~~~~~~pvlgi~~ 107 (307)
T 1u0t_A 74 DGCEL--VLVLGGDGTFLRAAELARNASIPVLGVNL 107 (307)
T ss_dssp --CCC--EEEEECHHHHHHHHHHHHHHTCCEEEEEC
T ss_pred cCCCE--EEEEeCCHHHHHHHHHhccCCCCEEEEeC
Confidence 34555 9999999999999765 889888863
No 220
>3d3k_A Enhancer of mRNA-decapping protein 3; HEDC3, phosphoprotein, protein binding; 2.20A {Homo sapiens}
Probab=25.11 E-value=43 Score=29.72 Aligned_cols=33 Identities=18% Similarity=0.265 Sum_probs=26.6
Q ss_pred CEEEEEcCCCC--CCHHHHHHHHHHHHhCCCeEEEEeC
Q 011792 7 PHVVLLPFPAY--GHIKPMLSLAKLFSHAGFRITFVNT 42 (477)
Q Consensus 7 ~~il~~~~~~~--GHv~p~l~La~~L~~rGH~Vt~~~~ 42 (477)
.+|++++.++- |+ -+.+|+.|..+|++|+++..
T Consensus 86 ~~vlVlcG~GNNGGD---Glv~AR~L~~~G~~V~v~~~ 120 (259)
T 3d3k_A 86 PTVALLCGPHVKGAQ---GISCGRHLANHDVQVILFLP 120 (259)
T ss_dssp CEEEEEECSSHHHHH---HHHHHHHHHHTTCEEEEECC
T ss_pred CeEEEEECCCCCHHH---HHHHHHHHHHCCCeEEEEEe
Confidence 48999888654 33 37899999999999999865
No 221
>1zi8_A Carboxymethylenebutenolidase; alpha and beta proteins, 3-D structure, serine esterase, HYD aromatic hydrocarbons, catabolism; 1.40A {Pseudomonas putida} PDB: 1zj5_A* 1zi9_A 1zi6_A 1zj4_A* 1din_A 1ziy_A* 1zic_A 1zix_A 1ggv_A*
Probab=25.00 E-value=84 Score=26.25 Aligned_cols=36 Identities=11% Similarity=0.182 Sum_probs=29.4
Q ss_pred CEEEEEcCCCCCCHHHHHHHHHHHHhCCCeEEEEeC
Q 011792 7 PHVVLLPFPAYGHIKPMLSLAKLFSHAGFRITFVNT 42 (477)
Q Consensus 7 ~~il~~~~~~~GHv~p~l~La~~L~~rGH~Vt~~~~ 42 (477)
..++++..|..|...-+..+++.|+++|+.|..+-.
T Consensus 28 ~p~vv~~hG~~~~~~~~~~~~~~l~~~g~~v~~~d~ 63 (236)
T 1zi8_A 28 APVIVIAQDIFGVNAFMRETVSWLVDQGYAAVCPDL 63 (236)
T ss_dssp EEEEEEECCTTBSCHHHHHHHHHHHHTTCEEEEECG
T ss_pred CCEEEEEcCCCCCCHHHHHHHHHHHhCCcEEEeccc
Confidence 346777777778888899999999999999888754
No 222
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=24.90 E-value=1e+02 Score=25.87 Aligned_cols=33 Identities=18% Similarity=0.201 Sum_probs=23.2
Q ss_pred CEEEEEcCCCCCCHHHHHHHHHHHHhCCCeEEEEeCC
Q 011792 7 PHVVLLPFPAYGHIKPMLSLAKLFSHAGFRITFVNTD 43 (477)
Q Consensus 7 ~~il~~~~~~~GHv~p~l~La~~L~~rGH~Vt~~~~~ 43 (477)
|||++. |+.|.+- ..|+++|.++||+|+.+.-.
T Consensus 1 MkilVt--GatG~iG--~~l~~~L~~~g~~V~~~~R~ 33 (224)
T 3h2s_A 1 MKIAVL--GATGRAG--SAIVAEARRRGHEVLAVVRD 33 (224)
T ss_dssp CEEEEE--TTTSHHH--HHHHHHHHHTTCEEEEEESC
T ss_pred CEEEEE--cCCCHHH--HHHHHHHHHCCCEEEEEEec
Confidence 465444 3334443 67899999999999998753
No 223
>3ec7_A Putative dehydrogenase; alpha-beta, structural genomics, PSI-2, protein structure in midwest center for structural genomics, MCSG; HET: MSE NAD EPE; 2.15A {Salmonella typhimurium}
Probab=24.88 E-value=2.3e+02 Score=26.05 Aligned_cols=108 Identities=6% Similarity=-0.024 Sum_probs=57.5
Q ss_pred cEEEEEecCcccCCHHHHHHHHHHHH-hC-CCcEEEEEecCCcCCCCCCCCCchhhHhhhcCCCceeeccCHHHHHhccc
Q 011792 288 SVLYVSFGSFIKLSGDQILEFWHGIV-NS-GKGFLWVIRSDLIDGESGVGPVPAELDQGTKERGCIVSWAPQEEVLAHQA 365 (477)
Q Consensus 288 ~~v~vs~Gs~~~~~~~~~~~~~~a~~-~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~~p~~~ll~~~~ 365 (477)
.+.+|+.|.+. ...+.++. .. +..++.+...+. .....+.++. ++....+-...++|..++
T Consensus 25 rvgiIG~G~~g-------~~~~~~l~~~~~~~~lvav~d~~~--------~~~~~~a~~~--g~~~~~~~~~~~ll~~~~ 87 (357)
T 3ec7_A 25 KAGIVGIGMIG-------SDHLRRLANTVSGVEVVAVCDIVA--------GRAQAALDKY--AIEAKDYNDYHDLINDKD 87 (357)
T ss_dssp EEEEECCSHHH-------HHHHHHHHHTCTTEEEEEEECSST--------THHHHHHHHH--TCCCEEESSHHHHHHCTT
T ss_pred eEEEECCcHHH-------HHHHHHHHhhCCCcEEEEEEeCCH--------HHHHHHHHHh--CCCCeeeCCHHHHhcCCC
Confidence 47788888775 34566666 33 445555553210 1111122211 111334567788888766
Q ss_pred ccccccccCc----hhHHHHhhcCCceec-CCccc--hhhhhHHHHhhhhceee
Q 011792 366 IGGFLTHSGW----NSTLESMVAGVPMIC-WPQVG--DQQVNSRCVSEIWKIGF 412 (477)
Q Consensus 366 ~~~~I~HGG~----gs~~eal~~GvP~l~-~P~~~--DQ~~na~rv~~~~G~G~ 412 (477)
+++++--... .-+.+++.+|+++++ -|+.. ++-.-...++++.|+-+
T Consensus 88 ~D~V~i~tp~~~h~~~~~~al~aGk~Vl~EKPla~~~~e~~~l~~~a~~~g~~~ 141 (357)
T 3ec7_A 88 VEVVIITASNEAHADVAVAALNANKYVFCEKPLAVTAADCQRVIEAEQKNGKRM 141 (357)
T ss_dssp CCEEEECSCGGGHHHHHHHHHHTTCEEEEESSSCSSHHHHHHHHHHHHHHTSCC
T ss_pred CCEEEEcCCcHHHHHHHHHHHHCCCCEEeecCccCCHHHHHHHHHHHHHhCCeE
Confidence 6667654443 346678999999886 46544 33333333334456533
No 224
>4fbl_A LIPS lipolytic enzyme; thermostable, structural genomics, enzyme function initiativ structural proteomics in europe, spine; HET: SPD; 1.99A {Unidentified} PDB: 4fbm_A
Probab=24.88 E-value=50 Score=29.22 Aligned_cols=33 Identities=27% Similarity=0.337 Sum_probs=25.9
Q ss_pred EEEcCCCCCCHHHHHHHHHHHHhCCCeEEEEeC
Q 011792 10 VLLPFPAYGHIKPMLSLAKLFSHAGFRITFVNT 42 (477)
Q Consensus 10 l~~~~~~~GHv~p~l~La~~L~~rGH~Vt~~~~ 42 (477)
+++.+|..|+-.-+..+++.|+++|++|..+--
T Consensus 54 VlllHG~~~s~~~~~~la~~La~~Gy~Via~Dl 86 (281)
T 4fbl_A 54 VLVSHGFTGSPQSMRFLAEGFARAGYTVATPRL 86 (281)
T ss_dssp EEEECCTTCCGGGGHHHHHHHHHTTCEEEECCC
T ss_pred EEEECCCCCCHHHHHHHHHHHHHCCCEEEEECC
Confidence 445577677777788999999999999877533
No 225
>1yt5_A Inorganic polyphosphate/ATP-NAD kinase; domain 1: alpha/beta domain2: beta sandwich, structural genomics, PSI, protein structure initiative; 2.30A {Thermotoga maritima}
Probab=24.85 E-value=21 Score=31.71 Aligned_cols=51 Identities=20% Similarity=0.332 Sum_probs=36.6
Q ss_pred cccccccCchhHHHHhhc---CCceecCCccchhhhhHHHHhhhhceeeeccCCCCHHHHHHHHHHHHhH
Q 011792 367 GGFLTHSGWNSTLESMVA---GVPMICWPQVGDQQVNSRCVSEIWKIGFDMKDTCDRSTIEKLVRDLMDN 433 (477)
Q Consensus 367 ~~~I~HGG~gs~~eal~~---GvP~l~~P~~~DQ~~na~rv~~~~G~G~~l~~~~~~~~l~~~v~~ll~~ 433 (477)
+++|+=||=||+.++++. ++|++.++.. . . |.. ..+.++++.+++..+++.
T Consensus 43 D~vv~~GGDGTll~~a~~~~~~~PilGIn~G-----------~-~--Gfl--~~~~~~~~~~al~~i~~g 96 (258)
T 1yt5_A 43 DLIVVVGGDGTVLKAAKKAADGTPMVGFKAG-----------R-L--GFL--TSYTLDEIDRFLEDLRNW 96 (258)
T ss_dssp SEEEEEECHHHHHHHHTTBCTTCEEEEEESS-----------S-C--CSS--CCBCGGGHHHHHHHHHTT
T ss_pred CEEEEEeCcHHHHHHHHHhCCCCCEEEEECC-----------C-C--Ccc--CcCCHHHHHHHHHHHHcC
Confidence 449999999999999876 7888887521 1 1 211 235688888888888763
No 226
>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*
Probab=24.81 E-value=72 Score=27.27 Aligned_cols=33 Identities=15% Similarity=0.294 Sum_probs=24.9
Q ss_pred CEEEEEcCCCCCCHHHHHHHHHHHHhCCCeEEEEeC
Q 011792 7 PHVVLLPFPAYGHIKPMLSLAKLFSHAGFRITFVNT 42 (477)
Q Consensus 7 ~~il~~~~~~~GHv~p~l~La~~L~~rGH~Vt~~~~ 42 (477)
+|+++++.++.| + =.++|+.|.++|++|.++.-
T Consensus 2 ~k~vlITGas~g-I--G~~ia~~l~~~G~~V~~~~r 34 (235)
T 3l77_A 2 MKVAVITGASRG-I--GEAIARALARDGYALALGAR 34 (235)
T ss_dssp CCEEEEESCSSH-H--HHHHHHHHHHTTCEEEEEES
T ss_pred CCEEEEECCCcH-H--HHHHHHHHHHCCCEEEEEeC
Confidence 467777776632 2 36889999999999988765
No 227
>1ydg_A Trp repressor binding protein WRBA; tetramer, structural genomics, PSI, protein structure initiative; 2.00A {Deinococcus radiodurans} SCOP: c.23.5.8 PDB: 1yrh_A*
Probab=24.74 E-value=97 Score=26.00 Aligned_cols=37 Identities=14% Similarity=0.158 Sum_probs=27.7
Q ss_pred CCEEEEEcCCCCCCHHHHH-HHHHHHHhCCCeEEEEeC
Q 011792 6 VPHVVLLPFPAYGHIKPML-SLAKLFSHAGFRITFVNT 42 (477)
Q Consensus 6 ~~~il~~~~~~~GHv~p~l-~La~~L~~rGH~Vt~~~~ 42 (477)
.|||+++-....|+..-+. .+++.|.+.|++|.++--
T Consensus 6 mmkilii~~S~~g~T~~la~~i~~~l~~~g~~v~~~~l 43 (211)
T 1ydg_A 6 PVKLAIVFYSSTGTGYAMAQEAAEAGRAAGAEVRLLKV 43 (211)
T ss_dssp CCEEEEEECCSSSHHHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CCeEEEEEECCCChHHHHHHHHHHHHhcCCCEEEEEec
Confidence 5789888887788776544 456777778999988754
No 228
>1pno_A NAD(P) transhydrogenase subunit beta; nucleotide binding fold, oxidoreductase; HET: NAP; 2.10A {Rhodospirillum rubrum} SCOP: c.31.1.4 PDB: 1pnq_A* 1xlt_C* 2oor_C* 1ptj_C* 2oo5_C*
Probab=24.67 E-value=76 Score=25.86 Aligned_cols=36 Identities=17% Similarity=0.456 Sum_probs=27.7
Q ss_pred CEEEEEcCCCCCC-----HHHHHHHHHHHHhCCCeEEEEeCCc
Q 011792 7 PHVVLLPFPAYGH-----IKPMLSLAKLFSHAGFRITFVNTDQ 44 (477)
Q Consensus 7 ~~il~~~~~~~GH-----v~p~l~La~~L~~rGH~Vt~~~~~~ 44 (477)
.+|+|+|. ||= -.+...|++.|..+|.+|.|..++-
T Consensus 24 ~~ViIvPG--YGmAvAqAQ~~v~el~~~L~~~G~~V~faIHPV 64 (180)
T 1pno_A 24 SKVIIVPG--YGMAVAQAQHALREMADVLKKEGVEVSYAIHPV 64 (180)
T ss_dssp SEEEEEEC--HHHHHHTCHHHHHHHHHHHHHTTCEEEEEECTT
T ss_pred CeEEEECC--hHHHHHHHHHHHHHHHHHHHHCCCeEEEEeccc
Confidence 35666653 432 2578899999999999999999855
No 229
>1d4o_A NADP(H) transhydrogenase; nucleotide-binding fold, protein-NADP(H) complex, inverted binding of NADP(H), oxidoreductase; HET: NAP; 1.21A {Bos taurus} SCOP: c.31.1.4
Probab=24.39 E-value=77 Score=25.93 Aligned_cols=36 Identities=25% Similarity=0.452 Sum_probs=27.8
Q ss_pred CEEEEEcCCCCCC-----HHHHHHHHHHHHhCCCeEEEEeCCc
Q 011792 7 PHVVLLPFPAYGH-----IKPMLSLAKLFSHAGFRITFVNTDQ 44 (477)
Q Consensus 7 ~~il~~~~~~~GH-----v~p~l~La~~L~~rGH~Vt~~~~~~ 44 (477)
.+|+++|. ||= -.+...|++.|.++|.+|.|..++-
T Consensus 23 ~~ViIvPG--YGmAvAqAQ~~v~el~~~L~~~G~~V~faIHPV 63 (184)
T 1d4o_A 23 NSIIITPG--YGLCAAKAQYPIADLVKMLSEQGKKVRFGIHPV 63 (184)
T ss_dssp SEEEEEEC--HHHHHTTTHHHHHHHHHHHHHTTCEEEEEECTT
T ss_pred CeEEEECC--hHHHHHHHHHHHHHHHHHHHHCCCeEEEEeccc
Confidence 36666654 332 2578999999999999999999855
No 230
>2fb6_A Conserved hypothetical protein; structural genomics, PSI, protein STRU initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.46A {Bacteroides thetaiotaomicron}
Probab=24.38 E-value=68 Score=24.42 Aligned_cols=39 Identities=10% Similarity=-0.032 Sum_probs=28.2
Q ss_pred CCEEEEEcCCCCCCH--HHHHHHHHHHHhCC--CeEEEEeCCc
Q 011792 6 VPHVVLLPFPAYGHI--KPMLSLAKLFSHAG--FRITFVNTDQ 44 (477)
Q Consensus 6 ~~~il~~~~~~~GHv--~p~l~La~~L~~rG--H~Vt~~~~~~ 44 (477)
.+|++|+-..+.-.. +..+..|.....+| |+|.++.-..
T Consensus 7 ~~K~~ivi~s~d~~~~~~~al~~A~~a~~~G~~~eV~i~~~G~ 49 (117)
T 2fb6_A 7 NDKLTILWTTDNKDTVFNMLAMYALNSKNRGWWKHINIILWGA 49 (117)
T ss_dssp TSEEEEEECCCCHHHHHHTHHHHHHHHHHHTSCSEEEEEECSH
T ss_pred CCeEEEEEEcCChHHHHHHHHHHHHHHHHcCCCCcEEEEEECC
Confidence 378877777654222 34677899999999 8999998744
No 231
>3ezy_A Dehydrogenase; structural genomics, unknown function, PSI-2, protein structure initiative; 2.04A {Thermotoga maritima}
Probab=24.37 E-value=1.9e+02 Score=26.36 Aligned_cols=63 Identities=11% Similarity=0.049 Sum_probs=37.5
Q ss_pred eccCHHHHHhcccccccccccCch----hHHHHhhcCCceecC-Cccc--hhhhhHHHHhhhhceeeecc
Q 011792 353 SWAPQEEVLAHQAIGGFLTHSGWN----STLESMVAGVPMICW-PQVG--DQQVNSRCVSEIWKIGFDMK 415 (477)
Q Consensus 353 ~~~p~~~ll~~~~~~~~I~HGG~g----s~~eal~~GvP~l~~-P~~~--DQ~~na~rv~~~~G~G~~l~ 415 (477)
.+-...++|..++++++|----.. .+.+++.+|+++++= |+.. ++-.-...++++.|+-+...
T Consensus 52 ~~~~~~~ll~~~~~D~V~i~tp~~~h~~~~~~al~~gk~v~~EKP~~~~~~e~~~l~~~a~~~g~~~~v~ 121 (344)
T 3ezy_A 52 AYKDPHELIEDPNVDAVLVCSSTNTHSELVIACAKAKKHVFCEKPLSLNLADVDRMIEETKKADVILFTG 121 (344)
T ss_dssp EESSHHHHHHCTTCCEEEECSCGGGHHHHHHHHHHTTCEEEEESCSCSCHHHHHHHHHHHHHHTCCEEEE
T ss_pred eeCCHHHHhcCCCCCEEEEcCCCcchHHHHHHHHhcCCeEEEECCCCCCHHHHHHHHHHHHHhCCcEEEe
Confidence 345678888866665576544433 467789999998863 6543 33333333345456655554
No 232
>2v4n_A Multifunctional protein SUR E; hydrolase, surviVal protein, stationary phase, phosph mononucleotidase, divalent metal ION; 1.7A {Salmonella typhimurium} PDB: 2v4o_A
Probab=24.33 E-value=98 Score=27.32 Aligned_cols=38 Identities=18% Similarity=0.212 Sum_probs=29.9
Q ss_pred CEEEEEcCCCCCCHHHHHHHHHHHHhCCCeEEEEeCCccc
Q 011792 7 PHVVLLPFPAYGHIKPMLSLAKLFSHAGFRITFVNTDQYH 46 (477)
Q Consensus 7 ~~il~~~~~~~GHv~p~l~La~~L~~rGH~Vt~~~~~~~~ 46 (477)
||||+..--|. |---+.+|+++|.+.| +|+++.|....
T Consensus 2 M~ILlTNDDGi-~apGi~aL~~~L~~~g-~V~VVAP~~~~ 39 (254)
T 2v4n_A 2 MRILLSNDDGV-HAPGIQTLAKALREFA-DVQVVAPDRNR 39 (254)
T ss_dssp CEEEEECSSCT-TCHHHHHHHHHHTTTS-EEEEEEESSCC
T ss_pred CeEEEEcCCCC-CCHHHHHHHHHHHhCC-cEEEEeeCCCC
Confidence 68888777665 4455889999999876 99999996653
No 233
>1efv_B Electron transfer flavoprotein; electron transport, glutaric acidemia type II; HET: FAD AMP; 2.10A {Homo sapiens} SCOP: c.26.2.3 PDB: 1t9g_S* 2a1u_B* 2a1t_S*
Probab=24.03 E-value=70 Score=28.28 Aligned_cols=42 Identities=14% Similarity=-0.003 Sum_probs=32.2
Q ss_pred HHHHHHHHhcCCCCCeEEEECCCcc------hHHHHHHHcCCCeEEEccC
Q 011792 97 KLAFRQLLMTPGRLPTCIISDSIMS------FAIDVAEELNIPIITFRPY 140 (477)
Q Consensus 97 ~~~l~~~l~~~~~~~D~vI~D~~~~------~~~~~A~~lgiP~v~~~~~ 140 (477)
...+.+++++. +||+|++..... .+..+|..||+|.+.....
T Consensus 105 A~~La~~i~~~--~~dlVl~G~~s~d~d~~~v~p~lA~~L~~~~vt~v~~ 152 (255)
T 1efv_B 105 ARVLAKLAEKE--KVDLVLLGKQAIDDDCNQTGQMTAGFLDWPQGTFASQ 152 (255)
T ss_dssp HHHHHHHHHHH--TCSEEEEESCCTTTCCCCHHHHHHHHHTCCEEEEEEE
T ss_pred HHHHHHHHHhc--CCCEEEEeCcccCCchhhHHHHHHHHhCCCcccceEE
Confidence 34556666653 799999988664 6889999999999987543
No 234
>3ohs_X Trans-1,2-dihydrobenzene-1,2-DIOL dehydrogenase; dimeric dihydrodiol dehydrogenase, MDD, oxidoreductase; 1.90A {Macaca fascicularis} PDB: 2o48_X 2poq_X* 2o4u_X
Probab=24.02 E-value=2.8e+02 Score=25.06 Aligned_cols=62 Identities=10% Similarity=0.061 Sum_probs=36.7
Q ss_pred ccCHHHHHhcccccccccccC----chhHHHHhhcCCceec-CCccc--hhhhhHHHHhhhhceeeecc
Q 011792 354 WAPQEEVLAHQAIGGFLTHSG----WNSTLESMVAGVPMIC-WPQVG--DQQVNSRCVSEIWKIGFDMK 415 (477)
Q Consensus 354 ~~p~~~ll~~~~~~~~I~HGG----~gs~~eal~~GvP~l~-~P~~~--DQ~~na~rv~~~~G~G~~l~ 415 (477)
+-...++|..+++++|+---- .--+.+|+.+|+++++ -|+.. ++-.--..++++.|+-+...
T Consensus 55 ~~~~~~ll~~~~vD~V~i~tp~~~H~~~~~~al~~GkhVl~EKP~a~~~~e~~~l~~~a~~~~~~~~v~ 123 (334)
T 3ohs_X 55 YGSYEELAKDPNVEVAYVGTQHPQHKAAVMLCLAAGKAVLCEKPMGVNAAEVREMVTEARSRGLFLMEA 123 (334)
T ss_dssp ESSHHHHHHCTTCCEEEECCCGGGHHHHHHHHHHTTCEEEEESSSSSSHHHHHHHHHHHHHTTCCEEEE
T ss_pred cCCHHHHhcCCCCCEEEECCCcHHHHHHHHHHHhcCCEEEEECCCCCCHHHHHHHHHHHHHhCCEEEEE
Confidence 456788888766665654332 2346778999999876 36543 34333334445456544443
No 235
>3nrb_A Formyltetrahydrofolate deformylase; N-terminal ACT domain, structural genomics, joint center for structural genomics, JCSG; HET: MSE FLC; 2.05A {Pseudomonas putida}
Probab=23.99 E-value=2.7e+02 Score=24.90 Aligned_cols=117 Identities=10% Similarity=0.053 Sum_probs=70.2
Q ss_pred HHHHHHHHHHHhCCCcEEEEEecCCcCCCCCCCCCchhhHhhhcCCCceeeccCHHHHHhcccccccccccCchhHHHHh
Q 011792 303 DQILEFWHGIVNSGKGFLWVIRSDLIDGESGVGPVPAELDQGTKERGCIVSWAPQEEVLAHQAIGGFLTHSGWNSTLESM 382 (477)
Q Consensus 303 ~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~~p~~~ll~~~~~~~~I~HGG~gs~~eal 382 (477)
+.-..+++.++..+..+|+..+. -..+++.+.+..+..+.-. |+++ .=...|.+....|+
T Consensus 152 ~~~~~~~~~l~~~~~Dlivlagy--------m~il~~~~l~~~~~~~iNi----------HpSl--LP~~rG~~p~~~Ai 211 (287)
T 3nrb_A 152 AQESQIKNIVTQSQADLIVLARY--------MQILSDDLSAFLSGRCINI----------HHSF--LPGFKGAKPYHQAH 211 (287)
T ss_dssp HHHHHHHHHHHHHTCSEEEESSC--------CSCCCHHHHHHHTTSEEEE----------ESSC--TTTTCSSCHHHHHH
T ss_pred hHHHHHHHHHHHhCCCEEEhhhh--------hhhcCHHHHhhccCCeEEE----------Cccc--ccCCCCchHHHHHH
Confidence 34456777888888888888743 2367776665544332211 1221 11234889999999
Q ss_pred hcCCceecCCccc--hhhhhHHHHhhhhceeeeccCCCCHHHHHHHHHHHHhHhHHHHHHHHHHH
Q 011792 383 VAGVPMICWPQVG--DQQVNSRCVSEIWKIGFDMKDTCDRSTIEKLVRDLMDNKRDKIMESTVQI 445 (477)
Q Consensus 383 ~~GvP~l~~P~~~--DQ~~na~rv~~~~G~G~~l~~~~~~~~l~~~v~~ll~~~~~~~~~~a~~l 445 (477)
.+|+....+-.+. +..+.+.-+. .--+.+...-|.++|.+.+.++-. .-|.+..+.+
T Consensus 212 ~~G~k~tG~Tvh~v~~~lD~GpIi~---Q~~v~i~~~dt~~~L~~r~~~~e~---~~l~~av~~~ 270 (287)
T 3nrb_A 212 TRGVKLIGATAHFVTADLDEGPIIA---QDVEHVSHRDSAEDLVRKGRDIER---RVLSRAVLLF 270 (287)
T ss_dssp HHTCSEEEEEEEECCSSSSCCCEEE---EEEEECCTTCCHHHHHHHHHHHHH---HHHHHHHHHH
T ss_pred HcCCCeEEEEEEEECCCCcCCCEEE---EEEEecCCCCCHHHHHHHHHHHHH---HHHHHHHHHH
Confidence 9999987776432 4444444442 223344456788898888877644 4555555544
No 236
>3obi_A Formyltetrahydrofolate deformylase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 1.95A {Rhodopseudomonas palustris}
Probab=23.81 E-value=2.9e+02 Score=24.76 Aligned_cols=117 Identities=10% Similarity=0.043 Sum_probs=70.9
Q ss_pred HHHHHHHHHHHhCCCcEEEEEecCCcCCCCCCCCCchhhHhhhcCCCceeeccCHHHHHhcccccccccccCchhHHHHh
Q 011792 303 DQILEFWHGIVNSGKGFLWVIRSDLIDGESGVGPVPAELDQGTKERGCIVSWAPQEEVLAHQAIGGFLTHSGWNSTLESM 382 (477)
Q Consensus 303 ~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~~p~~~ll~~~~~~~~I~HGG~gs~~eal 382 (477)
+.-..+++.++..+..+|+..+. -..+++.+.+..+..+.-. |+++ .=...|.+.+..|+
T Consensus 153 ~~~~~~~~~l~~~~~Dlivlagy--------~~il~~~~l~~~~~~~iNi----------HpSl--LP~~rG~~p~~~A~ 212 (288)
T 3obi_A 153 QQEAAITALIAQTHTDLVVLARY--------MQILSDEMSARLAGRCINI----------HHSF--LPGFKGAKPYHQAF 212 (288)
T ss_dssp HHHHHHHHHHHHHTCCEEEESSC--------CSCCCHHHHHHTTTSEEEE----------EEEC--SSCCCSSCHHHHHH
T ss_pred HHHHHHHHHHHhcCCCEEEhhhh--------hhhCCHHHHhhhcCCeEEe----------Cccc--ccCCCCchHHHHHH
Confidence 34456778888888888888743 2367776665544332211 1221 11234889999999
Q ss_pred hcCCceecCCcc--chhhhhHHHHhhhhceeeeccCCCCHHHHHHHHHHHHhHhHHHHHHHHHHH
Q 011792 383 VAGVPMICWPQV--GDQQVNSRCVSEIWKIGFDMKDTCDRSTIEKLVRDLMDNKRDKIMESTVQI 445 (477)
Q Consensus 383 ~~GvP~l~~P~~--~DQ~~na~rv~~~~G~G~~l~~~~~~~~l~~~v~~ll~~~~~~~~~~a~~l 445 (477)
.+|+....+-.+ .+..+.+.-+. .--+.+...-|.++|.+.+.++-. .-|.+..+.+
T Consensus 213 ~~G~~~~G~Tvh~v~~~~D~GpIi~---Q~~v~i~~~dt~~~L~~r~~~~e~---~~l~~av~~~ 271 (288)
T 3obi_A 213 DRGVKLIGATAHYVTSALDEGPIID---QDVERISHRDTPADLVRKGRDIER---RVLSRALHYH 271 (288)
T ss_dssp HHTCSEEEEEEEECCSSTTCSCEEE---EEEEECCTTCCHHHHHHHHHHHHH---HHHHHHHHHH
T ss_pred HcCCCEEEEEEEEECCCCcCCCeEE---EEEEecCCCCCHHHHHHHHHHHHH---HHHHHHHHHH
Confidence 999998777643 24455554442 233444456788998888877644 4555555544
No 237
>3czc_A RMPB; alpha/beta sandwich, phosphotransferase system, transferase, transport; 2.02A {Streptococcus mutans}
Probab=23.74 E-value=69 Score=23.97 Aligned_cols=37 Identities=11% Similarity=0.069 Sum_probs=29.2
Q ss_pred CCEEEEEcCCCCCCHHHHH-HHHHHHHhCCCe-EEEEeC
Q 011792 6 VPHVVLLPFPAYGHIKPML-SLAKLFSHAGFR-ITFVNT 42 (477)
Q Consensus 6 ~~~il~~~~~~~GHv~p~l-~La~~L~~rGH~-Vt~~~~ 42 (477)
++||+++|..|.|.-.-.. .|=+.+..+|.+ +.+-..
T Consensus 18 ~~kIlvvC~sG~gTS~m~~~kl~~~~~~~gi~~~~i~~~ 56 (110)
T 3czc_A 18 MVKVLTACGNGMGSSMVIKMKVENALRQLGVSDIESASC 56 (110)
T ss_dssp CEEEEEECCCCHHHHHHHHHHHHHHHHHTTCCCEEEEEE
T ss_pred CcEEEEECCCcHHHHHHHHHHHHHHHHHcCCCeEEEEEe
Confidence 5789999999998888777 777788889987 655443
No 238
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=23.67 E-value=47 Score=30.06 Aligned_cols=32 Identities=19% Similarity=0.163 Sum_probs=25.1
Q ss_pred CCEEEEEcCCCCCCHHHHHHHHHHHHhCCCeEEEEeC
Q 011792 6 VPHVVLLPFPAYGHIKPMLSLAKLFSHAGFRITFVNT 42 (477)
Q Consensus 6 ~~~il~~~~~~~GHv~p~l~La~~L~~rGH~Vt~~~~ 42 (477)
+++|.|+-.|.-| ..+|+.|+++||+|+++..
T Consensus 7 ~~~I~iIG~G~mG-----~~~a~~l~~~G~~V~~~dr 38 (303)
T 3g0o_A 7 DFHVGIVGLGSMG-----MGAARSCLRAGLSTWGADL 38 (303)
T ss_dssp CCEEEEECCSHHH-----HHHHHHHHHTTCEEEEECS
T ss_pred CCeEEEECCCHHH-----HHHHHHHHHCCCeEEEEEC
Confidence 5799999554433 5789999999999998854
No 239
>3cea_A MYO-inositol 2-dehydrogenase; NP_786804.1, oxidoreductase FA NAD-binding rossmann fold, structural genomics; HET: NAD; 2.40A {Lactobacillus plantarum WCFS1}
Probab=23.65 E-value=4.1e+02 Score=24.00 Aligned_cols=42 Identities=19% Similarity=0.288 Sum_probs=27.8
Q ss_pred cCHHHHHhcccccccccccCc----hhHHHHhhcCCceecC-Cccch
Q 011792 355 APQEEVLAHQAIGGFLTHSGW----NSTLESMVAGVPMICW-PQVGD 396 (477)
Q Consensus 355 ~p~~~ll~~~~~~~~I~HGG~----gs~~eal~~GvP~l~~-P~~~D 396 (477)
-...+++..++++++|.-... ..+.+++.+|+++++= |+..+
T Consensus 61 ~~~~~~l~~~~~D~V~i~tp~~~h~~~~~~al~~G~~v~~eKp~~~~ 107 (346)
T 3cea_A 61 TNYKDMIDTENIDAIFIVAPTPFHPEMTIYAMNAGLNVFCEKPLGLD 107 (346)
T ss_dssp SCHHHHHTTSCCSEEEECSCGGGHHHHHHHHHHTTCEEEECSCCCSC
T ss_pred CCHHHHhcCCCCCEEEEeCChHhHHHHHHHHHHCCCEEEEcCCCCCC
Confidence 356778875555557654443 3466789999999874 76544
No 240
>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=23.49 E-value=1.1e+02 Score=26.73 Aligned_cols=34 Identities=15% Similarity=0.177 Sum_probs=25.9
Q ss_pred CCEEEEEcCCCCCCHHHHHHHHHHHHhCCCeEEEEeC
Q 011792 6 VPHVVLLPFPAYGHIKPMLSLAKLFSHAGFRITFVNT 42 (477)
Q Consensus 6 ~~~il~~~~~~~GHv~p~l~La~~L~~rGH~Vt~~~~ 42 (477)
+-|+++++.++.| + =.++|+.|+++|++|+++.-
T Consensus 10 ~~k~vlVTGas~g-I--G~aia~~l~~~G~~V~~~~r 43 (264)
T 3ucx_A 10 TDKVVVISGVGPA-L--GTTLARRCAEQGADLVLAAR 43 (264)
T ss_dssp TTCEEEEESCCTT-H--HHHHHHHHHHTTCEEEEEES
T ss_pred CCcEEEEECCCcH-H--HHHHHHHHHHCcCEEEEEeC
Confidence 3467888877643 2 36789999999999988764
No 241
>3e61_A Putative transcriptional repressor of ribose OPER; structural genomics, DNA-binding, transcripti regulation, PSI-2; 2.00A {Staphylococcus saprophyticus subsp}
Probab=23.48 E-value=3.2e+02 Score=23.49 Aligned_cols=29 Identities=21% Similarity=0.242 Sum_probs=20.7
Q ss_pred CCeEEEECCCcchHHH-HHHHcCCCeEEEc
Q 011792 110 LPTCIISDSIMSFAID-VAEELNIPIITFR 138 (477)
Q Consensus 110 ~~D~vI~D~~~~~~~~-~A~~lgiP~v~~~ 138 (477)
++|.||.......... .+...|+|+|.+.
T Consensus 64 ~~dgiIi~~~~~~~~~~~l~~~~iPvV~~~ 93 (277)
T 3e61_A 64 NCTGMISTAFNENIIENTLTDHHIPFVFID 93 (277)
T ss_dssp TCSEEEECGGGHHHHHHHHHHC-CCEEEGG
T ss_pred CCCEEEEecCChHHHHHHHHcCCCCEEEEe
Confidence 8999999874444455 6677899999853
No 242
>3qjg_A Epidermin biosynthesis protein EPID; structural genomics, center for structural genomics of infec diseases, csgid, oxidoreductase; HET: FMN; 2.04A {Staphylococcus aureus} SCOP: c.34.1.0
Probab=23.45 E-value=2.6e+02 Score=22.88 Aligned_cols=115 Identities=10% Similarity=0.047 Sum_probs=59.4
Q ss_pred CcEEEEEecCcccCCHHHHHHHHHHHHhCCCcEEEEEecCCcCCCCCCCCCchhhHhhhcCCCce---eeccCHHHHHhc
Q 011792 287 RSVLYVSFGSFIKLSGDQILEFWHGIVNSGKGFLWVIRSDLIDGESGVGPVPAELDQGTKERGCI---VSWAPQEEVLAH 363 (477)
Q Consensus 287 ~~~v~vs~Gs~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~nv~~---~~~~p~~~ll~~ 363 (477)
+.+++.-.|+..... ...+++.+.+.+..+-+........ .+.+...+...+.++. ..|+++-.+-..
T Consensus 6 k~IllgvTGs~aa~k---~~~ll~~L~~~g~~V~vv~T~~A~~------fi~~~~l~~l~~~v~~~~~~~~~~hi~l~~~ 76 (175)
T 3qjg_A 6 ENVLICLCGSVNSIN---ISHYIIELKSKFDEVNVIASTNGRK------FINGEILKQFCDNYYDEFEDPFLNHVDIANK 76 (175)
T ss_dssp CEEEEEECSSGGGGG---HHHHHHHHTTTCSEEEEEECTGGGG------GSCHHHHHHHCSCEECTTTCTTCCHHHHHHT
T ss_pred CEEEEEEeCHHHHHH---HHHHHHHHHHCCCEEEEEECcCHHH------HhhHHHHHHhcCCEEecCCCCccccccccch
Confidence 345555566665432 3345666666777765555433111 2333323333332211 134666666655
Q ss_pred ccccccccccCchhHH-------------HHhhcCCceecCCccch-------hhhhHHHHhhhhceee
Q 011792 364 QAIGGFLTHSGWNSTL-------------ESMVAGVPMICWPQVGD-------QQVNSRCVSEIWKIGF 412 (477)
Q Consensus 364 ~~~~~~I~HGG~gs~~-------------eal~~GvP~l~~P~~~D-------Q~~na~rv~~~~G~G~ 412 (477)
+|+ .+|-=+-.||+. -++..++|++++|-..+ ...|-.++.+ +|+-+
T Consensus 77 aD~-~vVaPaTanTlakiA~GiaDnLlt~~~la~~~pvvl~Pamn~~m~~~p~~~~Nl~~L~~-~G~~i 143 (175)
T 3qjg_A 77 HDK-IIILPATSNTINKIANGICDNLLLTICHTAFEKLSIFPNMNLRMWENPVTQNNIRLLKD-YGVSI 143 (175)
T ss_dssp CSE-EEEEEECHHHHHHHHTTCCCSHHHHHHHTCGGGEEEEECEEHHHHTCHHHHHHHHHHHH-TTCEE
T ss_pred hCE-EEEeeCCHHHHHHHHccccCCHHHHHHHHcCCCEEEEecCChhhhcCHHHHHHHHHHHH-CCCEE
Confidence 655 344444444332 34778999999994322 2346667744 67543
No 243
>3iqw_A Tail-anchored protein targeting factor GET3; ATPase, Zn binding, protein transport; HET: ANP; 3.00A {Chaetomium thermophilum} PDB: 3iqx_A* 3ibg_A*
Probab=23.41 E-value=78 Score=29.25 Aligned_cols=39 Identities=15% Similarity=0.124 Sum_probs=33.3
Q ss_pred CCEEEEEcC-CCCCCHHHHHHHHHHHHhCCCeEEEEeCCc
Q 011792 6 VPHVVLLPF-PAYGHIKPMLSLAKLFSHAGFRITFVNTDQ 44 (477)
Q Consensus 6 ~~~il~~~~-~~~GHv~p~l~La~~L~~rGH~Vt~~~~~~ 44 (477)
.++|+|++. ||-|-..-...||..|+++|++|.++..+.
T Consensus 15 ~~~i~~~sgkGGvGKTt~a~~lA~~la~~g~~vllid~D~ 54 (334)
T 3iqw_A 15 SLRWIFVGGKGGVGKTTTSCSLAIQLAKVRRSVLLLSTDP 54 (334)
T ss_dssp TCCEEEEECSTTSSHHHHHHHHHHHHTTSSSCEEEEECCS
T ss_pred CeEEEEEeCCCCccHHHHHHHHHHHHHhCCCcEEEEECCC
Confidence 356777666 778999999999999999999999999864
No 244
>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli}
Probab=23.37 E-value=81 Score=27.78 Aligned_cols=34 Identities=21% Similarity=0.222 Sum_probs=25.4
Q ss_pred CCEEEEEcCCCCCCHHHHHHHHHHHHhCCCeEEEEeC
Q 011792 6 VPHVVLLPFPAYGHIKPMLSLAKLFSHAGFRITFVNT 42 (477)
Q Consensus 6 ~~~il~~~~~~~GHv~p~l~La~~L~~rGH~Vt~~~~ 42 (477)
+.++++++.++. -+ =.++|+.|+++|++|++...
T Consensus 25 ~~k~vlITGas~-gI--G~a~a~~l~~~G~~V~~~~~ 58 (272)
T 4e3z_A 25 DTPVVLVTGGSR-GI--GAAVCRLAARQGWRVGVNYA 58 (272)
T ss_dssp CSCEEEETTTTS-HH--HHHHHHHHHHTTCEEEEEES
T ss_pred CCCEEEEECCCc-hH--HHHHHHHHHHCCCEEEEEcC
Confidence 356788877664 22 36889999999999988744
No 245
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=23.08 E-value=74 Score=28.08 Aligned_cols=33 Identities=15% Similarity=0.242 Sum_probs=24.8
Q ss_pred CCEEEEEcCCCCCCHHHHHHHHHHHHhCCCeEEEEeCC
Q 011792 6 VPHVVLLPFPAYGHIKPMLSLAKLFSHAGFRITFVNTD 43 (477)
Q Consensus 6 ~~~il~~~~~~~GHv~p~l~La~~L~~rGH~Vt~~~~~ 43 (477)
.|+|++.- + |.+- ..|++.|.++||+|+.++-.
T Consensus 5 ~~~ilVtG--a-G~iG--~~l~~~L~~~g~~V~~~~r~ 37 (286)
T 3ius_A 5 TGTLLSFG--H-GYTA--RVLSRALAPQGWRIIGTSRN 37 (286)
T ss_dssp CCEEEEET--C-CHHH--HHHHHHHGGGTCEEEEEESC
T ss_pred cCcEEEEC--C-cHHH--HHHHHHHHHCCCEEEEEEcC
Confidence 36777763 4 6554 46789999999999999764
No 246
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=23.06 E-value=47 Score=29.97 Aligned_cols=32 Identities=16% Similarity=0.302 Sum_probs=24.5
Q ss_pred CCEEEEEcCCCCCCHHHHHHHHHHHHhCCCeEEEEeC
Q 011792 6 VPHVVLLPFPAYGHIKPMLSLAKLFSHAGFRITFVNT 42 (477)
Q Consensus 6 ~~~il~~~~~~~GHv~p~l~La~~L~~rGH~Vt~~~~ 42 (477)
+|||+|+-.|.-| ..+|..|.++||+|+++..
T Consensus 3 ~m~i~iiG~G~~G-----~~~a~~l~~~g~~V~~~~r 34 (316)
T 2ew2_A 3 AMKIAIAGAGAMG-----SRLGIMLHQGGNDVTLIDQ 34 (316)
T ss_dssp -CEEEEECCSHHH-----HHHHHHHHHTTCEEEEECS
T ss_pred CCeEEEECcCHHH-----HHHHHHHHhCCCcEEEEEC
Confidence 4789988654433 4678999999999999865
No 247
>3q9l_A Septum site-determining protein MIND; ATPase, bacterial cell division inhibitor, MINC, MINE, cell hydrolase; HET: ATP; 2.34A {Escherichia coli} PDB: 3r9i_A* 3r9j_A*
Probab=23.00 E-value=86 Score=27.17 Aligned_cols=35 Identities=11% Similarity=0.180 Sum_probs=28.5
Q ss_pred EEEEcC-CCCCCHHHHHHHHHHHHhCCCeEEEEeCC
Q 011792 9 VVLLPF-PAYGHIKPMLSLAKLFSHAGFRITFVNTD 43 (477)
Q Consensus 9 il~~~~-~~~GHv~p~l~La~~L~~rGH~Vt~~~~~ 43 (477)
|+|... ||-|-..-...||..|+++|++|.++=.+
T Consensus 5 i~v~s~kgGvGKTt~a~~LA~~la~~g~~VlliD~D 40 (260)
T 3q9l_A 5 IVVTSGKGGVGKTTSSAAIATGLAQKGKKTVVIDFA 40 (260)
T ss_dssp EEEECSSTTSSHHHHHHHHHHHHHHTTCCEEEEECC
T ss_pred EEEECCCCCCcHHHHHHHHHHHHHhCCCcEEEEECC
Confidence 444443 67799999999999999999999998654
No 248
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=22.89 E-value=45 Score=28.74 Aligned_cols=29 Identities=21% Similarity=0.390 Sum_probs=22.4
Q ss_pred EEEEEcCCCCCCHHHHHHHHHHHHhCCCeEEEEe
Q 011792 8 HVVLLPFPAYGHIKPMLSLAKLFSHAGFRITFVN 41 (477)
Q Consensus 8 ~il~~~~~~~GHv~p~l~La~~L~~rGH~Vt~~~ 41 (477)
.|+|+-.|-.| +.+|..|+++|++|+++=
T Consensus 4 dV~IIGaGpaG-----L~aA~~La~~G~~V~v~E 32 (336)
T 3kkj_A 4 PIAIIGTGIAG-----LSAAQALTAAGHQVHLFD 32 (336)
T ss_dssp CEEEECCSHHH-----HHHHHHHHHTTCCEEEEC
T ss_pred CEEEECcCHHH-----HHHHHHHHHCCCCEEEEE
Confidence 46666555433 788999999999999984
No 249
>3l3b_A ES1 family protein; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ALS collaborative crystallography, isopr biosynthesis; 1.90A {Ehrlichia chaffeensis}
Probab=22.81 E-value=1.6e+02 Score=25.66 Aligned_cols=37 Identities=3% Similarity=0.065 Sum_probs=26.9
Q ss_pred CEEEEEcC-----CCCCCHHHHHHHHHHHHhCCCeEEEEeCCc
Q 011792 7 PHVVLLPF-----PAYGHIKPMLSLAKLFSHAGFRITFVNTDQ 44 (477)
Q Consensus 7 ~~il~~~~-----~~~GHv~p~l~La~~L~~rGH~Vt~~~~~~ 44 (477)
+||+|+.. ++ --..=+....+.|.+.|++|+++++..
T Consensus 24 kkV~ill~~~~~~dG-~e~~E~~~p~~vL~~aG~~V~~~S~~~ 65 (242)
T 3l3b_A 24 LNSAVILAGCGHMDG-SEIREAVLVMLELDRHNVNFKCFAPNK 65 (242)
T ss_dssp CEEEEECCCSSTTTS-CCHHHHHHHHHHHHHTTCEEEEEECSS
T ss_pred CEEEEEEecCCCCCC-eeHHHHHHHHHHHHHCCCEEEEEecCC
Confidence 58888876 43 233345666788999999999999843
No 250
>1byi_A Dethiobiotin synthase; biotin synthesis, cyclo-ligase, ligase; 0.97A {Escherichia coli} SCOP: c.37.1.10 PDB: 1bs1_A* 1a82_A 1dad_A* 1dae_A* 1daf_A* 1dag_A* 1dah_A* 1dai_A* 1dak_A* 1dam_A* 1dbs_A 1dts_A
Probab=22.76 E-value=81 Score=26.63 Aligned_cols=33 Identities=15% Similarity=0.116 Sum_probs=28.1
Q ss_pred EEEEEcC-CCCCCHHHHHHHHHHHHhCCCeEEEE
Q 011792 8 HVVLLPF-PAYGHIKPMLSLAKLFSHAGFRITFV 40 (477)
Q Consensus 8 ~il~~~~-~~~GHv~p~l~La~~L~~rGH~Vt~~ 40 (477)
.|++... ++-|-..-...||..|+++|++|.++
T Consensus 3 ~I~v~s~kgGvGKTt~a~nLa~~la~~G~rVll~ 36 (224)
T 1byi_A 3 RYFVTGTDTEVGKTVASCALLQAAKAAGYRTAGY 36 (224)
T ss_dssp EEEEEESSTTSCHHHHHHHHHHHHHHTTCCEEEE
T ss_pred eEEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEE
Confidence 3555554 67899999999999999999999986
No 251
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=22.75 E-value=49 Score=30.60 Aligned_cols=32 Identities=13% Similarity=0.109 Sum_probs=24.7
Q ss_pred CCEEEEEcCCCCCCHHHHHHHHHHHHhCCCeEEEEeC
Q 011792 6 VPHVVLLPFPAYGHIKPMLSLAKLFSHAGFRITFVNT 42 (477)
Q Consensus 6 ~~~il~~~~~~~GHv~p~l~La~~L~~rGH~Vt~~~~ 42 (477)
+|||+|+-.|..| ..+|..|.+.||+|+++..
T Consensus 4 ~mki~iiG~G~~G-----~~~a~~L~~~g~~V~~~~r 35 (359)
T 1bg6_A 4 SKTYAVLGLGNGG-----HAFAAYLALKGQSVLAWDI 35 (359)
T ss_dssp CCEEEEECCSHHH-----HHHHHHHHHTTCEEEEECS
T ss_pred cCeEEEECCCHHH-----HHHHHHHHhCCCEEEEEeC
Confidence 4799999655434 4578889999999998865
No 252
>3ug7_A Arsenical pump-driving ATPase; tail-anchored, membrane protein, targeting factor, ATP-bindi TRC40, ARSA, nucleotide-binding; HET: ADP; 2.90A {Methanocaldococcus jannaschii} PDB: 3ug6_A*
Probab=22.74 E-value=98 Score=28.69 Aligned_cols=38 Identities=13% Similarity=0.252 Sum_probs=32.4
Q ss_pred CEEEEEcC-CCCCCHHHHHHHHHHHHhCCCeEEEEeCCc
Q 011792 7 PHVVLLPF-PAYGHIKPMLSLAKLFSHAGFRITFVNTDQ 44 (477)
Q Consensus 7 ~~il~~~~-~~~GHv~p~l~La~~L~~rGH~Vt~~~~~~ 44 (477)
.+|+|++. ||-|-..-...||..|+++|++|.++..+.
T Consensus 26 ~~i~v~sgKGGvGKTTvA~~LA~~lA~~G~rVLlvD~D~ 64 (349)
T 3ug7_A 26 TKYIMFGGKGGVGKTTMSAATGVYLAEKGLKVVIVSTDP 64 (349)
T ss_dssp CEEEEEECSSSTTHHHHHHHHHHHHHHSSCCEEEEECCT
T ss_pred CEEEEEeCCCCccHHHHHHHHHHHHHHCCCeEEEEeCCC
Confidence 45666655 778999999999999999999999999865
No 253
>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*
Probab=22.73 E-value=96 Score=27.18 Aligned_cols=34 Identities=21% Similarity=0.232 Sum_probs=25.9
Q ss_pred CCEEEEEcCCCCCCHHHHHHHHHHHHhCCCeEEEEeC
Q 011792 6 VPHVVLLPFPAYGHIKPMLSLAKLFSHAGFRITFVNT 42 (477)
Q Consensus 6 ~~~il~~~~~~~GHv~p~l~La~~L~~rGH~Vt~~~~ 42 (477)
+-|+++++.++.| -=.++|+.|+++|++|+++.-
T Consensus 7 ~~k~~lVTGas~G---IG~aia~~l~~~G~~V~~~~r 40 (265)
T 3lf2_A 7 SEAVAVVTGGSSG---IGLATVELLLEAGAAVAFCAR 40 (265)
T ss_dssp TTCEEEEETCSSH---HHHHHHHHHHHTTCEEEEEES
T ss_pred CCCEEEEeCCCCh---HHHHHHHHHHHCCCEEEEEeC
Confidence 3567888877643 246789999999999988764
No 254
>4ao6_A Esterase; hydrolase, thermo label; 1.60A {Unidentified} PDB: 4ao7_A 4ao8_A
Probab=22.72 E-value=70 Score=27.89 Aligned_cols=38 Identities=21% Similarity=0.228 Sum_probs=25.3
Q ss_pred CCEEEEEcCCCCCCH--HHHHHHHHHHHhCCCeEEEEeCC
Q 011792 6 VPHVVLLPFPAYGHI--KPMLSLAKLFSHAGFRITFVNTD 43 (477)
Q Consensus 6 ~~~il~~~~~~~GHv--~p~l~La~~L~~rGH~Vt~~~~~ 43 (477)
+.-++++.+|+.+|- ..+..+|+.|+++|+.|..+-..
T Consensus 55 ~~p~Vl~~HG~g~~~~~~~~~~~a~~la~~Gy~Vl~~D~r 94 (259)
T 4ao6_A 55 SDRLVLLGHGGTTHKKVEYIEQVAKLLVGRGISAMAIDGP 94 (259)
T ss_dssp CSEEEEEEC--------CHHHHHHHHHHHTTEEEEEECCC
T ss_pred CCCEEEEeCCCcccccchHHHHHHHHHHHCCCeEEeeccC
Confidence 345788888877773 35788999999999999887543
No 255
>1zh8_A Oxidoreductase; TM0312, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI; HET: MSE NAP; 2.50A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.5
Probab=22.69 E-value=2.2e+02 Score=26.00 Aligned_cols=62 Identities=16% Similarity=0.110 Sum_probs=36.1
Q ss_pred eccCHHHHHhcccccccccccCc----hhHHHHhhcCCceec-CCccc--hhhhhHHHHhhhhceeeec
Q 011792 353 SWAPQEEVLAHQAIGGFLTHSGW----NSTLESMVAGVPMIC-WPQVG--DQQVNSRCVSEIWKIGFDM 414 (477)
Q Consensus 353 ~~~p~~~ll~~~~~~~~I~HGG~----gs~~eal~~GvP~l~-~P~~~--DQ~~na~rv~~~~G~G~~l 414 (477)
-+-...++|..+++++|+---.. --+.+|+.+|+++++ -|+.. ++-.--..++++.|+-+..
T Consensus 70 ~~~~~~~ll~~~~vD~V~i~tp~~~H~~~~~~al~aGkhVl~EKPla~~~~ea~~l~~~a~~~g~~~~v 138 (340)
T 1zh8_A 70 VFDSYEELLESGLVDAVDLTLPVELNLPFIEKALRKGVHVICEKPISTDVETGKKVVELSEKSEKTVYI 138 (340)
T ss_dssp EESCHHHHHHSSCCSEEEECCCGGGHHHHHHHHHHTTCEEEEESSSSSSHHHHHHHHHHHHHCSSCEEE
T ss_pred ccCCHHHHhcCCCCCEEEEeCCchHHHHHHHHHHHCCCcEEEeCCCCCCHHHHHHHHHHHHHcCCeEEE
Confidence 35568888987666666643332 346788999999877 35543 3333333333444554444
No 256
>2o8n_A APOA-I binding protein; rossmann fold, protein binding; 2.00A {Mus musculus} PDB: 2dg2_A
Probab=22.69 E-value=57 Score=29.08 Aligned_cols=33 Identities=24% Similarity=0.338 Sum_probs=26.7
Q ss_pred CEEEEEcCCCC--CCHHHHHHHHHHHHhCCCeEEEEeC
Q 011792 7 PHVVLLPFPAY--GHIKPMLSLAKLFSHAGFRITFVNT 42 (477)
Q Consensus 7 ~~il~~~~~~~--GHv~p~l~La~~L~~rGH~Vt~~~~ 42 (477)
.+|++++.++- |+ -+.+|+.|.++|++|+++..
T Consensus 80 ~~VlVlcG~GNNGGD---Glv~AR~L~~~G~~V~V~~~ 114 (265)
T 2o8n_A 80 PTVLVICGPGNNGGD---GLVCARHLKLFGYQPTIYYP 114 (265)
T ss_dssp CEEEEEECSSHHHHH---HHHHHHHHHHTTCEEEEECC
T ss_pred CeEEEEECCCCCHHH---HHHHHHHHHHCCCcEEEEEe
Confidence 48999888764 33 37899999999999999865
No 257
>1ehi_A LMDDL2, D-alanine:D-lactate ligase; ATP-binding. grAsp motif for ATP.; HET: ADP PHY; 2.38A {Leuconostoc mesenteroides} SCOP: c.30.1.2 d.142.1.1
Probab=22.68 E-value=72 Score=29.94 Aligned_cols=37 Identities=8% Similarity=0.047 Sum_probs=29.3
Q ss_pred CCEEEEEcCCCCCC----HHHHHHHHHHH-HhCCCeEEEEeC
Q 011792 6 VPHVVLLPFPAYGH----IKPMLSLAKLF-SHAGFRITFVNT 42 (477)
Q Consensus 6 ~~~il~~~~~~~GH----v~p~l~La~~L-~~rGH~Vt~~~~ 42 (477)
++||+++..|-.+- +.....+.++| .++||+|+.+-.
T Consensus 3 k~~v~vl~gG~s~E~~vSl~s~~~v~~al~~~~g~~v~~i~~ 44 (377)
T 1ehi_A 3 KKRVALIFGGNSSEHDVSKRSAQNFYNAIEATGKYEIIVFAI 44 (377)
T ss_dssp CEEEEEEEECSSTTHHHHHHHHHHHHHHHHHHSSEEEEEEEE
T ss_pred CcEEEEEeCCCCCCcceeHHHHHHHHHHhCcccCcEEEEEEE
Confidence 68999997765553 34578889999 999999999864
No 258
>1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A*
Probab=22.65 E-value=99 Score=26.75 Aligned_cols=33 Identities=18% Similarity=0.194 Sum_probs=23.5
Q ss_pred CEEEEEcCCCCCCHHHHHHHHHHHHhCCCeEEEEeC
Q 011792 7 PHVVLLPFPAYGHIKPMLSLAKLFSHAGFRITFVNT 42 (477)
Q Consensus 7 ~~il~~~~~~~GHv~p~l~La~~L~~rGH~Vt~~~~ 42 (477)
||.++++.++ |-+ =.++++.|+++|++|+++.-
T Consensus 1 mk~vlVTGas-~gI--G~~~a~~l~~~G~~V~~~~r 33 (257)
T 1fjh_A 1 MSIIVISGCA-TGI--GAATRKVLEAAGHQIVGIDI 33 (257)
T ss_dssp CCEEEEETTT-SHH--HHHHHHHHHHTTCEEEEEES
T ss_pred CCEEEEeCCC-CHH--HHHHHHHHHHCCCEEEEEeC
Confidence 3566666655 322 35789999999999998754
No 259
>3f6r_A Flavodoxin; FMN binding, oxidized, electron transport, flavoprotein, FMN, transport; HET: FMN; 2.00A {Desulfovibrio desulfuricans} SCOP: c.23.5.0 PDB: 3f6s_A* 3f90_A* 3kap_A* 3kaq_A*
Probab=22.59 E-value=92 Score=24.31 Aligned_cols=38 Identities=18% Similarity=0.383 Sum_probs=27.3
Q ss_pred CEEEEEcCCCCCCHHHH-HHHHHHHHhCCCeEEEEeCCc
Q 011792 7 PHVVLLPFPAYGHIKPM-LSLAKLFSHAGFRITFVNTDQ 44 (477)
Q Consensus 7 ~~il~~~~~~~GHv~p~-l~La~~L~~rGH~Vt~~~~~~ 44 (477)
+||+++-...+|+..-+ -.|++.|.++|++|.++....
T Consensus 2 ~ki~I~y~S~tGnT~~~A~~ia~~l~~~g~~v~~~~~~~ 40 (148)
T 3f6r_A 2 SKVLIVFGSSTGNTESIAQKLEELIAAGGHEVTLLNAAD 40 (148)
T ss_dssp CEEEEEEECSSSHHHHHHHHHHHHHHTTTCEEEEEETTT
T ss_pred CeEEEEEECCCchHHHHHHHHHHHHHhCCCeEEEEehhh
Confidence 46766666667887654 446788888999999886543
No 260
>1efp_B ETF, protein (electron transfer flavoprotein); electron transport, glutaric acidemia type II; HET: FAD AMP; 2.60A {Paracoccus denitrificans} SCOP: c.26.2.3
Probab=22.57 E-value=70 Score=28.20 Aligned_cols=40 Identities=15% Similarity=0.008 Sum_probs=31.1
Q ss_pred HHHHHHHhcCCCCCeEEEECCCcc------hHHHHHHHcCCCeEEEcc
Q 011792 98 LAFRQLLMTPGRLPTCIISDSIMS------FAIDVAEELNIPIITFRP 139 (477)
Q Consensus 98 ~~l~~~l~~~~~~~D~vI~D~~~~------~~~~~A~~lgiP~v~~~~ 139 (477)
..+.+++++. .||+|++..... .+..+|..||+|.+....
T Consensus 103 ~~La~~i~~~--~~dlVl~G~~s~d~~~~~v~p~lA~~L~~~~vt~v~ 148 (252)
T 1efp_B 103 KILAAVARAE--GTELIIAGKQAIDNDMNATGQMLAAILGWAQATFAS 148 (252)
T ss_dssp HHHHHHHHHH--TCSEEEEESCCTTTCCCCHHHHHHHHHTCEEEEEEE
T ss_pred HHHHHHHHhc--CCCEEEEcCCccCCchhhHHHHHHHHhCCCccccEE
Confidence 4455566553 799999988664 688999999999998754
No 261
>2ho3_A Oxidoreductase, GFO/IDH/MOCA family; streptococcus pneumonia reductive methylation, structural genomics, PSI-2, protein initiative; HET: MLY; 2.00A {Streptococcus pneumoniae} PDB: 2ho5_A
Probab=22.56 E-value=4.2e+02 Score=23.73 Aligned_cols=60 Identities=13% Similarity=0.010 Sum_probs=33.9
Q ss_pred ccCHHHHHhcccccccccccCc----hhHHHHhhcCCceecC-Cccch--hhhhHHHHhhhhceeeec
Q 011792 354 WAPQEEVLAHQAIGGFLTHSGW----NSTLESMVAGVPMICW-PQVGD--QQVNSRCVSEIWKIGFDM 414 (477)
Q Consensus 354 ~~p~~~ll~~~~~~~~I~HGG~----gs~~eal~~GvP~l~~-P~~~D--Q~~na~rv~~~~G~G~~l 414 (477)
+-...++| .+++++++---.. --+.+++.+|+++++= |+..+ +-.--..++++.|+-+..
T Consensus 52 ~~~~~~~l-~~~~D~V~i~tp~~~h~~~~~~al~~gk~V~~EKP~~~~~~~~~~l~~~a~~~g~~~~~ 118 (325)
T 2ho3_A 52 FDQLEVFF-KSSFDLVYIASPNSLHFAQAKAALSAGKHVILEKPAVSQPQEWFDLIQTAEKNNCFIFE 118 (325)
T ss_dssp ESCHHHHH-TSSCSEEEECSCGGGHHHHHHHHHHTTCEEEEESSCCSSHHHHHHHHHHHHHTTCCEEE
T ss_pred eCCHHHHh-CCCCCEEEEeCChHHHHHHHHHHHHcCCcEEEecCCcCCHHHHHHHHHHHHHcCCEEEE
Confidence 44567777 4444446554443 3466789999998875 76543 322223333445655544
No 262
>3uug_A Multiple sugar-binding periplasmic receptor CHVE; periplasmic binding protein, sugar-binding protein, sugar binding protein; HET: BDP; 1.75A {Agrobacterium tumefaciens} PDB: 3urm_A*
Probab=22.47 E-value=4.1e+02 Score=23.53 Aligned_cols=84 Identities=13% Similarity=0.065 Sum_probs=51.2
Q ss_pred CCEEEEEcCCCCCCHHH--HHHHHHHHHhCCCeEEEEeCCccchhccCCCcccccccCCCCeEEEeCCCCCCCCCCCCCC
Q 011792 6 VPHVVLLPFPAYGHIKP--MLSLAKLFSHAGFRITFVNTDQYHDRLFGNTDVTAFYKHFPNFLCTSIPDGLPPDNPRFGI 83 (477)
Q Consensus 6 ~~~il~~~~~~~GHv~p--~l~La~~L~~rGH~Vt~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 83 (477)
+.+|.++.......+.. ...+-+++.++|+++.+..+....
T Consensus 3 ~~~Igvi~~~~~~~~~~~~~~gi~~~a~~~g~~~~~~~~~~~~------------------------------------- 45 (330)
T 3uug_A 3 KGSVGIAMPTKSSARWIDDGNNIVKQLQEAGYKTDLQYADDDI------------------------------------- 45 (330)
T ss_dssp CCEEEEEECCSSSTHHHHHHHHHHHHHHHTTCEEEEEECTTCH-------------------------------------
T ss_pred CcEEEEEeCCCcchHHHHHHHHHHHHHHHcCCEEEEeeCCCCH-------------------------------------
Confidence 45677766554433332 344667778889999887642110
Q ss_pred ChHHHHHhhchhcHHHHHHHHhcCCCCCeEEEECCCcc----hHHHHHHHcCCCeEEEcc
Q 011792 84 YTKDWFCSNKPVSKLAFRQLLMTPGRLPTCIISDSIMS----FAIDVAEELNIPIITFRP 139 (477)
Q Consensus 84 ~~~~~~~~~~~~~~~~l~~~l~~~~~~~D~vI~D~~~~----~~~~~A~~lgiP~v~~~~ 139 (477)
. .....++.++.. ++|.||...... .....+...|||+|.+..
T Consensus 46 --~--------~~~~~i~~~~~~---~vdgiIi~~~~~~~~~~~~~~~~~~giPvV~~~~ 92 (330)
T 3uug_A 46 --P--------NQLSQIENMVTK---GVKVLVIASIDGTTLSDVLKQAGEQGIKVIAYDR 92 (330)
T ss_dssp --H--------HHHHHHHHHHHH---TCSEEEECCSSGGGGHHHHHHHHHTTCEEEEESS
T ss_pred --H--------HHHHHHHHHHHc---CCCEEEEEcCCchhHHHHHHHHHHCCCCEEEECC
Confidence 0 012234455553 899999987653 225567778999999754
No 263
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=22.40 E-value=20 Score=35.09 Aligned_cols=33 Identities=24% Similarity=0.277 Sum_probs=26.6
Q ss_pred CCEEEEEcCCCCCCHHHHHHHHHHHHhCCCeEEEEeCC
Q 011792 6 VPHVVLLPFPAYGHIKPMLSLAKLFSHAGFRITFVNTD 43 (477)
Q Consensus 6 ~~~il~~~~~~~GHv~p~l~La~~L~~rGH~Vt~~~~~ 43 (477)
.|||+++-.|--| ..||+.|...||+|+++=..
T Consensus 3 ~M~iiI~G~G~vG-----~~la~~L~~~~~~v~vId~d 35 (461)
T 4g65_A 3 AMKIIILGAGQVG-----GTLAENLVGENNDITIVDKD 35 (461)
T ss_dssp CEEEEEECCSHHH-----HHHHHHTCSTTEEEEEEESC
T ss_pred cCEEEEECCCHHH-----HHHHHHHHHCCCCEEEEECC
Confidence 5899988766544 56899999999999999653
No 264
>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens}
Probab=22.28 E-value=1.1e+02 Score=26.54 Aligned_cols=39 Identities=10% Similarity=0.094 Sum_probs=26.2
Q ss_pred CCCCCCCEEEEEcCCCCCCHHHHHHHHHHHHhCCCeEEEEeC
Q 011792 1 MEQTRVPHVVLLPFPAYGHIKPMLSLAKLFSHAGFRITFVNT 42 (477)
Q Consensus 1 m~~~~~~~il~~~~~~~GHv~p~l~La~~L~~rGH~Vt~~~~ 42 (477)
|....+-+.++++.++ |-+ =.++++.|+++|++|+++.-
T Consensus 1 m~~~~~~k~vlITGas-ggi--G~~la~~l~~~G~~V~~~~r 39 (264)
T 2pd6_A 1 MQNRLRSALALVTGAG-SGI--GRAVSVRLAGEGATVAACDL 39 (264)
T ss_dssp CCCCCTTCEEEEETTT-SHH--HHHHHHHHHHTTCEEEEEES
T ss_pred CccccCCCEEEEECCC-ChH--HHHHHHHHHHCCCEEEEEeC
Confidence 4432234566676655 323 35789999999999998865
No 265
>2fsv_C NAD(P) transhydrogenase subunit beta; NAD(P) transhydrogenase subunits, oxidoreductas; HET: NAD NAP; 2.30A {Rhodospirillum rubrum} SCOP: c.31.1.4 PDB: 1e3t_A* 1hzz_C* 1nm5_C* 1u28_C* 1u2d_C* 1u2g_C* 2fr8_C* 2frd_C*
Probab=22.11 E-value=88 Score=26.11 Aligned_cols=36 Identities=17% Similarity=0.456 Sum_probs=27.5
Q ss_pred CEEEEEcCCCCCC-----HHHHHHHHHHHHhCCCeEEEEeCCc
Q 011792 7 PHVVLLPFPAYGH-----IKPMLSLAKLFSHAGFRITFVNTDQ 44 (477)
Q Consensus 7 ~~il~~~~~~~GH-----v~p~l~La~~L~~rGH~Vt~~~~~~ 44 (477)
.+|+|+|. ||= -.+...|++.|.++|.+|.|..++-
T Consensus 47 ~~ViIVPG--YGmAVAqAQ~~v~el~~~L~~~G~~V~faIHPV 87 (203)
T 2fsv_C 47 SKVIIVPG--YGMAVAQAQHALREMADVLKKEGVEVSYAIHPV 87 (203)
T ss_dssp SEEEEEEC--HHHHHHTCHHHHHHHHHHHHHTTCEEEEEECTT
T ss_pred CcEEEEcC--chHhHHHHHHHHHHHHHHHHHcCCeEEEEeccc
Confidence 35666654 332 2578899999999999999999855
No 266
>3gl9_A Response regulator; beta-sheet, surrounded by alpha helices, BOTH sides, signaling protein; HET: BFD; 1.80A {Thermotoga maritima} SCOP: c.23.1.0 PDB: 3dgf_C 3dge_C
Probab=21.89 E-value=99 Score=22.83 Aligned_cols=47 Identities=17% Similarity=0.243 Sum_probs=33.1
Q ss_pred cCCceecCCccchhhhhHHHHhhhhceeeeccCCCCHHHHHHHHHHHHh
Q 011792 384 AGVPMICWPQVGDQQVNSRCVSEIWKIGFDMKDTCDRSTIEKLVRDLMD 432 (477)
Q Consensus 384 ~GvP~l~~P~~~DQ~~na~rv~~~~G~G~~l~~~~~~~~l~~~v~~ll~ 432 (477)
..+|++++--..+........ + .|+--.+.+.++.++|.++++++++
T Consensus 75 ~~~pii~~s~~~~~~~~~~~~-~-~Ga~~~l~KP~~~~~L~~~i~~~l~ 121 (122)
T 3gl9_A 75 KRIPVIVLTAKGGEEDESLAL-S-LGARKVMRKPFSPSQFIEEVKHLLN 121 (122)
T ss_dssp TTSCEEEEESCCSHHHHHHHH-H-TTCSEEEESSCCHHHHHHHHHHHHC
T ss_pred cCCCEEEEecCCchHHHHHHH-h-cChhhhccCCCCHHHHHHHHHHHhc
Confidence 357888776554443333333 4 6877777789999999999999875
No 267
>3hly_A Flavodoxin-like domain; Q5MZP6_SYNP6, flavoprotein, DFA1, SNR135D, NESG, structural genomics, PSI-2; 2.40A {Synechococcus elongatus pcc 6301}
Probab=21.70 E-value=1.2e+02 Score=24.37 Aligned_cols=36 Identities=14% Similarity=0.285 Sum_probs=27.0
Q ss_pred CEEEEEcCCCCCCHHHHH-HHHHHHHhCCCeEEEEeC
Q 011792 7 PHVVLLPFPAYGHIKPML-SLAKLFSHAGFRITFVNT 42 (477)
Q Consensus 7 ~~il~~~~~~~GHv~p~l-~La~~L~~rGH~Vt~~~~ 42 (477)
|+|+++-...+|+..-+. .|++.|...|++|.++--
T Consensus 1 Mkv~IvY~S~tGnT~~~A~~ia~~l~~~g~~v~~~~~ 37 (161)
T 3hly_A 1 MSVLIGYLSDYGYSDRLSQAIGRGLVKTGVAVEMVDL 37 (161)
T ss_dssp -CEEEEECTTSTTHHHHHHHHHHHHHHTTCCEEEEET
T ss_pred CEEEEEEECCChHHHHHHHHHHHHHHhCCCeEEEEEC
Confidence 467777777789887654 578889889999988754
No 268
>2nly_A BH1492 protein, divergent polysaccharide deacetylase hypothetical; PFAM04748, structural PSI, protein structure initiative; 2.50A {Bacillus halodurans} SCOP: c.6.2.7
Probab=21.70 E-value=2.3e+02 Score=24.69 Aligned_cols=39 Identities=31% Similarity=0.331 Sum_probs=27.7
Q ss_pred HHHHHHHHhcCCCCCeEEEECCCcc---hHHHHHHHcCCCeEE
Q 011792 97 KLAFRQLLMTPGRLPTCIISDSIMS---FAIDVAEELNIPIIT 136 (477)
Q Consensus 97 ~~~l~~~l~~~~~~~D~vI~D~~~~---~~~~~A~~lgiP~v~ 136 (477)
...++.+++... +-.+++.|..+. .+..+|+.+|+|++.
T Consensus 114 ~~~m~~vm~~l~-~~gL~fvDS~Ts~~S~a~~~A~~~gvp~~~ 155 (245)
T 2nly_A 114 EKIMRAILEVVK-EKNAFIIDSGTSPHSLIPQLAEELEVPYAT 155 (245)
T ss_dssp HHHHHHHHHHHH-HTTCEEEECCCCSSCSHHHHHHHTTCCEEE
T ss_pred HHHHHHHHHHHH-HCCCEEEcCCCCcccHHHHHHHHcCCCeEE
Confidence 444555554422 345888988764 678899999999988
No 269
>3crn_A Response regulator receiver domain protein, CHEY-; structural genomics, signal regulator receiver domain; HET: PHD; 1.58A {Methanospirillum hungatei jf-1}
Probab=21.59 E-value=1.6e+02 Score=21.93 Aligned_cols=48 Identities=6% Similarity=0.069 Sum_probs=33.2
Q ss_pred cCCceecCCccchhhhhHHHHhhhhceeeeccCCCCHHHHHHHHHHHHhH
Q 011792 384 AGVPMICWPQVGDQQVNSRCVSEIWKIGFDMKDTCDRSTIEKLVRDLMDN 433 (477)
Q Consensus 384 ~GvP~l~~P~~~DQ~~na~rv~~~~G~G~~l~~~~~~~~l~~~v~~ll~~ 433 (477)
.++|+|++--..+.......+ + .|+--.+.+.++.++|.+++++++..
T Consensus 74 ~~~~ii~~s~~~~~~~~~~~~-~-~ga~~~l~KP~~~~~L~~~i~~~~~~ 121 (132)
T 3crn_A 74 PGMKKIMVTGYASLENSVFSL-N-AGADAYIMKPVNPRDLLEKIKEKLDE 121 (132)
T ss_dssp TTSEEEEEESCCCHHHHHHHH-H-TTCSEEEESSCCHHHHHHHHHHHHHH
T ss_pred CCCcEEEEeccccHHHHHHHH-h-ccchhhccCCCCHHHHHHHHHHHHhc
Confidence 467887775554433333333 4 57766666889999999999999875
No 270
>1djl_A Transhydrogenase DIII; rossmann fold dinucleotide binding fold reverse binding of N oxidoreductase; HET: NAP; 2.00A {Homo sapiens} SCOP: c.31.1.4 PDB: 1pt9_A* 1u31_A*
Probab=21.54 E-value=91 Score=26.10 Aligned_cols=36 Identities=22% Similarity=0.445 Sum_probs=27.5
Q ss_pred CEEEEEcCCCCCC-----HHHHHHHHHHHHhCCCeEEEEeCCc
Q 011792 7 PHVVLLPFPAYGH-----IKPMLSLAKLFSHAGFRITFVNTDQ 44 (477)
Q Consensus 7 ~~il~~~~~~~GH-----v~p~l~La~~L~~rGH~Vt~~~~~~ 44 (477)
.+|+|+|. ||= -.+...|++.|.++|.+|.|..++-
T Consensus 46 ~~ViIVPG--YGmAVAqAQ~~v~el~~~L~~~G~~V~faIHPV 86 (207)
T 1djl_A 46 NSIIITPG--YGLCAAKAQYPIADLVKMLTEQGKKVRFGIHPV 86 (207)
T ss_dssp SEEEEEEC--HHHHHHTCHHHHHHHHHHHHHTTCEEEEEECTT
T ss_pred CeEEEECC--chHHHHHHhHHHHHHHHHHHHCCCeEEEEeCcc
Confidence 35666653 332 2568899999999999999999855
No 271
>2wtm_A EST1E; hydrolase; 1.60A {Clostridium proteoclasticum} PDB: 2wtn_A*
Probab=21.52 E-value=1.1e+02 Score=26.14 Aligned_cols=35 Identities=9% Similarity=0.206 Sum_probs=27.3
Q ss_pred EEEEEcCCCCCC--HHHHHHHHHHHHhCCCeEEEEeC
Q 011792 8 HVVLLPFPAYGH--IKPMLSLAKLFSHAGFRITFVNT 42 (477)
Q Consensus 8 ~il~~~~~~~GH--v~p~l~La~~L~~rGH~Vt~~~~ 42 (477)
..+++.+|..|+ ..-+..+++.|.++|++|..+-.
T Consensus 28 p~vvl~HG~~~~~~~~~~~~~~~~l~~~g~~vi~~D~ 64 (251)
T 2wtm_A 28 PLCIIIHGFTGHSEERHIVAVQETLNEIGVATLRADM 64 (251)
T ss_dssp EEEEEECCTTCCTTSHHHHHHHHHHHHTTCEEEEECC
T ss_pred CEEEEEcCCCcccccccHHHHHHHHHHCCCEEEEecC
Confidence 456666777777 67788899999999999877644
No 272
>2l2q_A PTS system, cellobiose-specific IIB component (CE; cellobiose-specific phosphotransferase IIB component, struct genomics; NMR {Borrelia burgdorferi}
Probab=21.51 E-value=1e+02 Score=22.93 Aligned_cols=36 Identities=8% Similarity=0.008 Sum_probs=28.8
Q ss_pred CCEEEEEcCCCCCCHHHHHHHHHHHHhCCCeEEEEe
Q 011792 6 VPHVVLLPFPAYGHIKPMLSLAKLFSHAGFRITFVN 41 (477)
Q Consensus 6 ~~~il~~~~~~~GHv~p~l~La~~L~~rGH~Vt~~~ 41 (477)
.|||+++|..|.|+-.-...|-+.+..+|.++.+-+
T Consensus 4 ~mkIlvvC~~G~~TSll~~kl~~~~~~~gi~~~i~~ 39 (109)
T 2l2q_A 4 SMNILLVCGAGMSTSMLVQRIEKYAKSKNINATIEA 39 (109)
T ss_dssp CEEEEEESSSSCSSCHHHHHHHHHHHHHTCSEEEEE
T ss_pred ceEEEEECCChHhHHHHHHHHHHHHHHCCCCeEEEE
Confidence 378999999999888666777888888898876543
No 273
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=21.41 E-value=50 Score=29.67 Aligned_cols=32 Identities=6% Similarity=0.045 Sum_probs=25.5
Q ss_pred CEEEEEcCCCCCCHHHHHHHHHHHHhCCCeEEEEeCC
Q 011792 7 PHVVLLPFPAYGHIKPMLSLAKLFSHAGFRITFVNTD 43 (477)
Q Consensus 7 ~~il~~~~~~~GHv~p~l~La~~L~~rGH~Vt~~~~~ 43 (477)
.+|+++-.|..| +..|..|+++|++|+++-..
T Consensus 16 ~~vvIIG~G~aG-----l~aA~~l~~~g~~v~lie~~ 47 (323)
T 3f8d_A 16 FDVIIVGLGPAA-----YGAALYSARYMLKTLVIGET 47 (323)
T ss_dssp EEEEEECCSHHH-----HHHHHHHHHTTCCEEEEESS
T ss_pred cCEEEECccHHH-----HHHHHHHHHCCCcEEEEecc
Confidence 478887766544 67899999999999999763
No 274
>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}
Probab=21.40 E-value=99 Score=26.90 Aligned_cols=34 Identities=18% Similarity=0.020 Sum_probs=25.9
Q ss_pred CCEEEEEcCCCCCCHHHHHHHHHHHHhCCCeEEEEeC
Q 011792 6 VPHVVLLPFPAYGHIKPMLSLAKLFSHAGFRITFVNT 42 (477)
Q Consensus 6 ~~~il~~~~~~~GHv~p~l~La~~L~~rGH~Vt~~~~ 42 (477)
+.|+++++.++.| -=.++|+.|+++|++|+++.-
T Consensus 6 ~~k~vlVTGas~G---IG~aia~~l~~~G~~V~~~~r 39 (252)
T 3h7a_A 6 RNATVAVIGAGDY---IGAEIAKKFAAEGFTVFAGRR 39 (252)
T ss_dssp CSCEEEEECCSSH---HHHHHHHHHHHTTCEEEEEES
T ss_pred CCCEEEEECCCch---HHHHHHHHHHHCCCEEEEEeC
Confidence 3567788876642 246889999999999998865
No 275
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=21.34 E-value=58 Score=27.61 Aligned_cols=32 Identities=16% Similarity=0.297 Sum_probs=23.9
Q ss_pred CCEEEEEcCCCCCCHHHHHHHHHHHHhCCCeEEEEeC
Q 011792 6 VPHVVLLPFPAYGHIKPMLSLAKLFSHAGFRITFVNT 42 (477)
Q Consensus 6 ~~~il~~~~~~~GHv~p~l~La~~L~~rGH~Vt~~~~ 42 (477)
.++|.|+-.|..| ..+|+.|.++||+|+++..
T Consensus 19 ~~~I~iiG~G~mG-----~~la~~l~~~g~~V~~~~~ 50 (209)
T 2raf_A 19 GMEITIFGKGNMG-----QAIGHNFEIAGHEVTYYGS 50 (209)
T ss_dssp -CEEEEECCSHHH-----HHHHHHHHHTTCEEEEECT
T ss_pred CCEEEEECCCHHH-----HHHHHHHHHCCCEEEEEcC
Confidence 5788888654433 6788999999999998753
No 276
>2gkg_A Response regulator homolog; social motility, receiver domain, signalling, high resolutio signaling protein; 1.00A {Myxococcus xanthus} PDB: 2i6f_A 2nt4_A 2nt3_A
Probab=21.27 E-value=1e+02 Score=22.53 Aligned_cols=46 Identities=9% Similarity=0.052 Sum_probs=32.3
Q ss_pred cCCceecCCccchhhhhHHHHhhhhceeeeccCCCCHHHHHHHHHHHHh
Q 011792 384 AGVPMICWPQVGDQQVNSRCVSEIWKIGFDMKDTCDRSTIEKLVRDLMD 432 (477)
Q Consensus 384 ~GvP~l~~P~~~DQ~~na~rv~~~~G~G~~l~~~~~~~~l~~~v~~ll~ 432 (477)
..+|++++ -. +......+..+ .|+--.+.+.++.++|.++++.++.
T Consensus 79 ~~~~ii~~-~~-~~~~~~~~~~~-~g~~~~l~kp~~~~~l~~~i~~~~~ 124 (127)
T 2gkg_A 79 KNVPIVII-GN-PDGFAQHRKLK-AHADEYVAKPVDADQLVERAGALIG 124 (127)
T ss_dssp TTSCEEEE-EC-GGGHHHHHHST-TCCSEEEESSCCHHHHHHHHHHHHC
T ss_pred cCCCEEEE-ec-CCchhHHHHHH-hCcchheeCCCCHHHHHHHHHHHHc
Confidence 57899988 43 33444444423 5776566688999999999998875
No 277
>3s40_A Diacylglycerol kinase; structural genomics, the center for structural genomics of infectious diseases, csgid, transfer; 2.10A {Bacillus anthracis} PDB: 3t5p_A
Probab=21.27 E-value=71 Score=28.96 Aligned_cols=83 Identities=11% Similarity=0.073 Sum_probs=0.0
Q ss_pred CCcEEEEEecCcccCCHHHHHHHHHHHHhCCCcEEEEEecCCcCCCCCCCCCchhhHhhhcCCCceeeccCHHHHHhccc
Q 011792 286 SRSVLYVSFGSFIKLSGDQILEFWHGIVNSGKGFLWVIRSDLIDGESGVGPVPAELDQGTKERGCIVSWAPQEEVLAHQA 365 (477)
Q Consensus 286 ~~~~v~vs~Gs~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~~p~~~ll~~~~ 365 (477)
.+-.|+++--|-..........+...++..+..+.+.. ....-.....+.+.. ...+
T Consensus 9 ~~~~vi~Np~sG~~~~~~~~~~i~~~l~~~~~~~~~~~---------------------t~~~~~a~~~~~~~~--~~~d 65 (304)
T 3s40_A 9 EKVLLIVNPKAGQGDLHTNLTKIVPPLAAAFPDLHILH---------------------TKEQGDATKYCQEFA--SKVD 65 (304)
T ss_dssp SSEEEEECTTCSSSCHHHHHHHHHHHHHHHCSEEEEEE---------------------CCSTTHHHHHHHHHT--TTCS
T ss_pred CEEEEEECcccCCCchHHHHHHHHHHHHHcCCeEEEEE---------------------ccCcchHHHHHHHhh--cCCC
Q ss_pred ccccccccCchhHHHHhh------cCCceecCCc
Q 011792 366 IGGFLTHSGWNSTLESMV------AGVPMICWPQ 393 (477)
Q Consensus 366 ~~~~I~HGG~gs~~eal~------~GvP~l~~P~ 393 (477)
+ +|.-||=||+.|++. .++|+-++|.
T Consensus 66 ~--vv~~GGDGTl~~v~~~l~~~~~~~~l~iiP~ 97 (304)
T 3s40_A 66 L--IIVFGGDGTVFECTNGLAPLEIRPTLAIIPG 97 (304)
T ss_dssp E--EEEEECHHHHHHHHHHHTTCSSCCEEEEEEC
T ss_pred E--EEEEccchHHHHHHHHHhhCCCCCcEEEecC
No 278
>1j6u_A UDP-N-acetylmuramate-alanine ligase MURC; structural genomics, TM0231, JCSG, PSI, protein structure initiative; 2.30A {Thermotoga maritima} SCOP: c.5.1.1 c.59.1.1 c.72.2.1
Probab=21.26 E-value=70 Score=31.15 Aligned_cols=32 Identities=16% Similarity=0.040 Sum_probs=27.5
Q ss_pred CCEEEEEcCCCCCCHHHHHHHHHHHHhCCCeEEEEe
Q 011792 6 VPHVVLLPFPAYGHIKPMLSLAKLFSHAGFRITFVN 41 (477)
Q Consensus 6 ~~~il~~~~~~~GHv~p~l~La~~L~~rGH~Vt~~~ 41 (477)
-|++-++-..|.| +..+|+.|.++|++|+..=
T Consensus 12 ~~~~h~i~I~G~G----~sglA~~l~~~G~~V~g~D 43 (469)
T 1j6u_A 12 HMKIHFVGIGGIG----MSAVALHEFSNGNDVYGSN 43 (469)
T ss_dssp CCEEEEETTTSHH----HHHHHHHHHHTTCEEEEEC
T ss_pred cccEEEEEEcccC----HHHHHHHHHhCCCEEEEEc
Confidence 5899999998877 6788999999999999753
No 279
>2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus}
Probab=21.21 E-value=78 Score=28.48 Aligned_cols=34 Identities=15% Similarity=0.071 Sum_probs=22.6
Q ss_pred CCEEEEEcCCCCCCHHHHHHHHHHHHhCCCeEEEEeC
Q 011792 6 VPHVVLLPFPAYGHIKPMLSLAKLFSHAGFRITFVNT 42 (477)
Q Consensus 6 ~~~il~~~~~~~GHv~p~l~La~~L~~rGH~Vt~~~~ 42 (477)
+++.++++.++ |-+- ..|++.|.++||+|+.+.-
T Consensus 11 ~~~~vlVTGat-G~iG--~~l~~~L~~~G~~V~~~~r 44 (321)
T 2pk3_A 11 GSMRALITGVA-GFVG--KYLANHLTEQNVEVFGTSR 44 (321)
T ss_dssp --CEEEEETTT-SHHH--HHHHHHHHHTTCEEEEEES
T ss_pred CcceEEEECCC-ChHH--HHHHHHHHHCCCEEEEEec
Confidence 34445555443 5443 5788999999999999865
No 280
>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus}
Probab=21.18 E-value=70 Score=27.29 Aligned_cols=33 Identities=15% Similarity=0.194 Sum_probs=23.4
Q ss_pred CEEEEEcCCCCCCHHHHHHHHHHHHhCCCeEEEEeC
Q 011792 7 PHVVLLPFPAYGHIKPMLSLAKLFSHAGFRITFVNT 42 (477)
Q Consensus 7 ~~il~~~~~~~GHv~p~l~La~~L~~rGH~Vt~~~~ 42 (477)
||+++++.++. -+ =.++|+.|+++|++|.++.-
T Consensus 1 Mk~vlVTGas~-gI--G~~~a~~l~~~G~~V~~~~r 33 (230)
T 3guy_A 1 MSLIVITGASS-GL--GAELAKLYDAEGKATYLTGR 33 (230)
T ss_dssp --CEEEESTTS-HH--HHHHHHHHHHTTCCEEEEES
T ss_pred CCEEEEecCCc-hH--HHHHHHHHHHCCCEEEEEeC
Confidence 45677776663 22 36889999999999988865
No 281
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=21.15 E-value=57 Score=31.93 Aligned_cols=32 Identities=9% Similarity=0.201 Sum_probs=26.2
Q ss_pred CCEEEEEcCCCCCCHHHHHHHHHHHHhCCCeEEEEeC
Q 011792 6 VPHVVLLPFPAYGHIKPMLSLAKLFSHAGFRITFVNT 42 (477)
Q Consensus 6 ~~~il~~~~~~~GHv~p~l~La~~L~~rGH~Vt~~~~ 42 (477)
.|||.++-.|.-| +.+|..|++.||+|+++-.
T Consensus 8 ~~~I~VIG~G~vG-----~~lA~~la~~G~~V~~~d~ 39 (478)
T 2y0c_A 8 SMNLTIIGSGSVG-----LVTGACLADIGHDVFCLDV 39 (478)
T ss_dssp CCEEEEECCSHHH-----HHHHHHHHHTTCEEEEECS
T ss_pred CceEEEECcCHHH-----HHHHHHHHhCCCEEEEEEC
Confidence 6999999665544 6789999999999999864
No 282
>3u7q_A Nitrogenase molybdenum-iron protein alpha chain; multiple rossmann fold domains, reductase, nitrogen fixing, oxidoreductase; HET: HCA ICS 1CL CLF; 1.00A {Azotobacter vinelandii} SCOP: c.92.2.3 PDB: 1g21_A* 1g20_A* 1fp4_A* 1m1n_A* 1l5h_A* 1m1y_A* 1m34_A* 1n2c_A* 2afh_A* 2afi_A* 2afk_A* 2min_A* 3min_A* 3k1a_A* 1h1l_A* 1qgu_A* 1qh1_A* 1qh8_A*
Probab=21.00 E-value=57 Score=32.07 Aligned_cols=37 Identities=16% Similarity=0.190 Sum_probs=28.6
Q ss_pred HHHHHHHHhcCCCCCeEEEECCCcchHHHHHHHcCCCeEEEc
Q 011792 97 KLAFRQLLMTPGRLPTCIISDSIMSFAIDVAEELNIPIITFR 138 (477)
Q Consensus 97 ~~~l~~~l~~~~~~~D~vI~D~~~~~~~~~A~~lgiP~v~~~ 138 (477)
...+.+++++. +||++|... ....+|+++|||++.+.
T Consensus 406 ~~el~~~i~~~--~pDL~ig~~---~~~~ia~k~gIP~~~~~ 442 (492)
T 3u7q_A 406 GYEFEEFVKRI--KPDLIGSGI---KEKFIFQKMGIPFREMH 442 (492)
T ss_dssp HHHHHHHHHHH--CCSEEEECH---HHHHHHHHTTCCEEESS
T ss_pred HHHHHHHHHhc--CCcEEEeCc---chhHHHHHcCCCEEecc
Confidence 34566666665 899999975 45789999999999743
No 283
>3ego_A Probable 2-dehydropantoate 2-reductase; structural genomics, PANE, unknown function, cytoplasm, NADP, oxidoreductase; 1.90A {Bacillus subtilis}
Probab=20.99 E-value=42 Score=30.56 Aligned_cols=33 Identities=18% Similarity=0.064 Sum_probs=25.9
Q ss_pred CCEEEEEcCCCCCCHHHHHHHHHHHHhCCCeEEEEeCCc
Q 011792 6 VPHVVLLPFPAYGHIKPMLSLAKLFSHAGFRITFVNTDQ 44 (477)
Q Consensus 6 ~~~il~~~~~~~GHv~p~l~La~~L~~rGH~Vt~~~~~~ 44 (477)
+|||+|+-.|+.|- .+|..|. .||+|+++....
T Consensus 2 ~mkI~IiGaGa~G~-----~~a~~L~-~g~~V~~~~r~~ 34 (307)
T 3ego_A 2 SLKIGIIGGGSVGL-----LCAYYLS-LYHDVTVVTRRQ 34 (307)
T ss_dssp CCEEEEECCSHHHH-----HHHHHHH-TTSEEEEECSCH
T ss_pred CCEEEEECCCHHHH-----HHHHHHh-cCCceEEEECCH
Confidence 37999997766553 6788899 999999998643
No 284
>4dhx_B Enhancer of yellow 2 transcription factor homolog, 80 kDa MCM3-associated protein; mRNA export, transport protein-DNA binding protein complex; 2.10A {Homo sapiens}
Probab=20.95 E-value=1.2e+02 Score=22.46 Aligned_cols=50 Identities=16% Similarity=0.182 Sum_probs=26.7
Q ss_pred HHHHHHHHHHHhHhHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHhhh
Q 011792 421 STIEKLVRDLMDNKRDKIMESTVQIAKMARDAVKEGGSSYRNLEKLIEDIRLMAF 475 (477)
Q Consensus 421 ~~l~~~v~~ll~~~~~~~~~~a~~l~~~~~~~~~~gg~~~~~~~~~i~~~~~~~~ 475 (477)
+.|.+.++.-|.+ ..-++..+.+.... +++.|.....++++++++..++.
T Consensus 27 erL~~lL~~rL~E--cGW~Devr~~~r~~---i~~~g~~~vt~~~L~~~I~P~Ar 76 (101)
T 4dhx_B 27 ERLKELLRAKLIE--CGWKDQLKAHCKEV---IKEKGLEHVTVDDLVAEITPKGR 76 (101)
T ss_dssp HHHHHHHHHHHHH--TTHHHHHHHHHHHH---HHHHCTTTCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH--CCcHHHHHHHHHHH---HHHcCCCCCCHHHHHHHHhHHHH
Confidence 4444444444443 33344444444333 33355444578888888877664
No 285
>1g3q_A MIND ATPase, cell division inhibitor; alpha-beta-alpha layered, protein-ADP complex, cell cycle, hydrolase; HET: ADP; 2.00A {Pyrococcus furiosus} SCOP: c.37.1.10 PDB: 1g3r_A* 1ion_A*
Probab=20.93 E-value=1e+02 Score=26.19 Aligned_cols=36 Identities=14% Similarity=0.186 Sum_probs=29.1
Q ss_pred EEEEEcC-CCCCCHHHHHHHHHHHHhCCCeEEEEeCC
Q 011792 8 HVVLLPF-PAYGHIKPMLSLAKLFSHAGFRITFVNTD 43 (477)
Q Consensus 8 ~il~~~~-~~~GHv~p~l~La~~L~~rGH~Vt~~~~~ 43 (477)
.|+|.+. |+-|-..-...||..|+++|++|.++-.+
T Consensus 4 ~i~v~s~kgGvGKTt~a~~LA~~la~~g~~VlliD~D 40 (237)
T 1g3q_A 4 IISIVSGKGGTGKTTVTANLSVALGDRGRKVLAVDGD 40 (237)
T ss_dssp EEEEECSSTTSSHHHHHHHHHHHHHHTTCCEEEEECC
T ss_pred EEEEecCCCCCCHHHHHHHHHHHHHhcCCeEEEEeCC
Confidence 3445444 67799999999999999999999998654
No 286
>2ph1_A Nucleotide-binding protein; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; 2.70A {Archaeoglobus fulgidus dsm 4304} PDB: 3kb1_A*
Probab=20.90 E-value=1e+02 Score=26.94 Aligned_cols=37 Identities=14% Similarity=0.239 Sum_probs=29.7
Q ss_pred EEEEEcC-CCCCCHHHHHHHHHHHHhCCCeEEEEeCCc
Q 011792 8 HVVLLPF-PAYGHIKPMLSLAKLFSHAGFRITFVNTDQ 44 (477)
Q Consensus 8 ~il~~~~-~~~GHv~p~l~La~~L~~rGH~Vt~~~~~~ 44 (477)
.|+|... ||-|=..-...||..|+++|++|.++=.+.
T Consensus 20 vI~v~s~kGGvGKTT~a~nLA~~la~~G~~VlliD~D~ 57 (262)
T 2ph1_A 20 RIAVMSGKGGVGKSTVTALLAVHYARQGKKVGILDADF 57 (262)
T ss_dssp EEEEECSSSCTTHHHHHHHHHHHHHHTTCCEEEEECCS
T ss_pred EEEEEcCCCCCCHHHHHHHHHHHHHHCCCeEEEEeCCC
Confidence 4555444 677899999999999999999999986543
No 287
>3foj_A Uncharacterized protein; protein SSP1007, structural genomics, PSI-2, protein structure initiative; 1.60A {Staphylococcus saprophyticus subsp}
Probab=20.85 E-value=1.5e+02 Score=21.16 Aligned_cols=36 Identities=6% Similarity=0.070 Sum_probs=26.0
Q ss_pred CEEEEEcCCCCCCHHHHHHHHHHHHhCCCeEEEEeCCccch
Q 011792 7 PHVVLLPFPAYGHIKPMLSLAKLFSHAGFRITFVNTDQYHD 47 (477)
Q Consensus 7 ~~il~~~~~~~GHv~p~l~La~~L~~rGH~Vt~~~~~~~~~ 47 (477)
.+|++++..+ ......++.|...|++|..+.. .+..
T Consensus 57 ~~ivvyC~~g----~rs~~a~~~L~~~G~~v~~l~G-G~~~ 92 (100)
T 3foj_A 57 ETYYIICKAG----GRSAQVVQYLEQNGVNAVNVEG-GMDE 92 (100)
T ss_dssp SEEEEECSSS----HHHHHHHHHHHTTTCEEEEETT-HHHH
T ss_pred CcEEEEcCCC----chHHHHHHHHHHCCCCEEEecc-cHHH
Confidence 5788888544 4567889999999998887654 4433
No 288
>2zki_A 199AA long hypothetical Trp repressor binding protein; alpha/beta structure, transcription; 2.90A {Sulfolobus tokodaii}
Probab=20.80 E-value=98 Score=25.61 Aligned_cols=36 Identities=22% Similarity=0.420 Sum_probs=26.7
Q ss_pred CCEEEEEcCCCCCCHHHHH-HHHHHHHhCCCeEEEEeC
Q 011792 6 VPHVVLLPFPAYGHIKPML-SLAKLFSHAGFRITFVNT 42 (477)
Q Consensus 6 ~~~il~~~~~~~GHv~p~l-~La~~L~~rGH~Vt~~~~ 42 (477)
.|||+++... .|+..-+. .+++.|.+.|++|.++--
T Consensus 4 mmkilii~~S-~g~T~~la~~i~~~l~~~g~~v~~~~l 40 (199)
T 2zki_A 4 KPNILVLFYG-YGSIVELAKEIGKGAEEAGAEVKIRRV 40 (199)
T ss_dssp CCEEEEEECC-SSHHHHHHHHHHHHHHHHSCEEEEEEC
T ss_pred CcEEEEEEeC-ccHHHHHHHHHHHHHHhCCCEEEEEeh
Confidence 4789888888 88776544 356667778999988754
No 289
>3kux_A Putative oxidoreductase; oxidoreductase family, csgid, structural genomics, center FO structural genomics of infectious diseases; HET: MSE; 2.75A {Yersinia pestis}
Probab=20.63 E-value=4.8e+02 Score=23.70 Aligned_cols=78 Identities=9% Similarity=0.025 Sum_probs=44.5
Q ss_pred eccCHHHHHhcccccccccccCc----hhHHHHhhcCCceec-CCccc--hhhhhHHHHhhhhceeeecc--CCCCHHHH
Q 011792 353 SWAPQEEVLAHQAIGGFLTHSGW----NSTLESMVAGVPMIC-WPQVG--DQQVNSRCVSEIWKIGFDMK--DTCDRSTI 423 (477)
Q Consensus 353 ~~~p~~~ll~~~~~~~~I~HGG~----gs~~eal~~GvP~l~-~P~~~--DQ~~na~rv~~~~G~G~~l~--~~~~~~~l 423 (477)
-+-...++|..+++++|+--.-. --+.+|+.+|+++++ -|+.. ++-.--..++++.|+-+.+. ..+++.
T Consensus 55 ~~~~~~~ll~~~~vD~V~i~tp~~~H~~~~~~al~aGkhV~~EKPla~~~~e~~~l~~~a~~~g~~~~v~~~~r~~p~-- 132 (352)
T 3kux_A 55 VVSDPQMLFNDPSIDLIVIPTPNDTHFPLAQSALAAGKHVVVDKPFTVTLSQANALKEHADDAGLLLSVFHNRRWDSD-- 132 (352)
T ss_dssp EESCHHHHHHCSSCCEEEECSCTTTHHHHHHHHHHTTCEEEECSSCCSCHHHHHHHHHHHHHTTCCEEECCGGGGCHH--
T ss_pred eECCHHHHhcCCCCCEEEEeCChHHHHHHHHHHHHCCCcEEEECCCcCCHHHHHHHHHHHHHcCCeEEEEeecccCHH--
Confidence 34567889988766666654432 346788999999987 36543 33333333445556655554 234443
Q ss_pred HHHHHHHHh
Q 011792 424 EKLVRDLMD 432 (477)
Q Consensus 424 ~~~v~~ll~ 432 (477)
...+++++.
T Consensus 133 ~~~~~~~i~ 141 (352)
T 3kux_A 133 FLTLKTLLA 141 (352)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHh
Confidence 234444544
No 290
>3zq6_A Putative arsenical pump-driving ATPase; tail-anchored, membrane protein; HET: ADP; 2.11A {Methanothermobacter thermautotrophicusorganism_taxid}
Probab=20.56 E-value=98 Score=28.30 Aligned_cols=38 Identities=16% Similarity=0.174 Sum_probs=31.9
Q ss_pred CEEEEEcC-CCCCCHHHHHHHHHHHHhCCCeEEEEeCCc
Q 011792 7 PHVVLLPF-PAYGHIKPMLSLAKLFSHAGFRITFVNTDQ 44 (477)
Q Consensus 7 ~~il~~~~-~~~GHv~p~l~La~~L~~rGH~Vt~~~~~~ 44 (477)
.+|+|++. ||-|-..-...||..|+++|++|.++..+.
T Consensus 14 ~~i~v~sgKGGvGKTTvA~~LA~~lA~~G~rVLlvD~D~ 52 (324)
T 3zq6_A 14 TTFVFIGGKGGVGKTTISAATALWMARSGKKTLVISTDP 52 (324)
T ss_dssp CEEEEEEESTTSSHHHHHHHHHHHHHHTTCCEEEEECCS
T ss_pred eEEEEEeCCCCchHHHHHHHHHHHHHHCCCcEEEEeCCC
Confidence 35555555 777999999999999999999999998865
No 291
>1e2b_A Enzyme IIB-cellobiose; phosphotransferase system, transferas transport, phosphorylation; NMR {Escherichia coli} SCOP: c.44.2.1 PDB: 1iib_A 1h9c_A* 2wwv_D 2wy2_D
Probab=20.49 E-value=2e+02 Score=21.20 Aligned_cols=37 Identities=5% Similarity=-0.021 Sum_probs=29.6
Q ss_pred CCEEEEEcCCCCCCHHHHHHHHHHHHhCCCeEEEEeC
Q 011792 6 VPHVVLLPFPAYGHIKPMLSLAKLFSHAGFRITFVNT 42 (477)
Q Consensus 6 ~~~il~~~~~~~GHv~p~l~La~~L~~rGH~Vt~~~~ 42 (477)
.+||+++|..|-|-=.-...+=+.+..+|.++.+-..
T Consensus 3 mkkIll~Cg~G~sTS~l~~k~~~~~~~~gi~~~i~a~ 39 (106)
T 1e2b_A 3 KKHIYLFSSAGMSTSLLVSKMRAQAEKYEVPVIIEAF 39 (106)
T ss_dssp CEEEEEECSSSTTTHHHHHHHHHHHHHSCCSEEEEEE
T ss_pred CcEEEEECCCchhHHHHHHHHHHHHHHCCCCeEEEEe
Confidence 4689999998876666667888889999999877654
No 292
>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}
Probab=20.36 E-value=1.2e+02 Score=25.35 Aligned_cols=33 Identities=18% Similarity=0.249 Sum_probs=23.2
Q ss_pred CEEEEEcCCCCCCHHHHHHHHHHHHhCCCeEEEEeCC
Q 011792 7 PHVVLLPFPAYGHIKPMLSLAKLFSHAGFRITFVNTD 43 (477)
Q Consensus 7 ~~il~~~~~~~GHv~p~l~La~~L~~rGH~Vt~~~~~ 43 (477)
|||++. |+.|-+- ..|++.|.++||+|+.+.-.
T Consensus 1 M~ilIt--GatG~iG--~~l~~~L~~~g~~V~~~~R~ 33 (219)
T 3dqp_A 1 MKIFIV--GSTGRVG--KSLLKSLSTTDYQIYAGARK 33 (219)
T ss_dssp CEEEEE--STTSHHH--HHHHHHHTTSSCEEEEEESS
T ss_pred CeEEEE--CCCCHHH--HHHHHHHHHCCCEEEEEECC
Confidence 455554 3334333 58899999999999998753
No 293
>3dkr_A Esterase D; alpha beta hydrolase, mechanism, catalytic triad, rotation; 1.60A {Lactobacillus rhamnosus} SCOP: c.69.1.0 PDB: 3dlt_A 3dyi_A 3dyv_A 3e1g_A
Probab=20.26 E-value=93 Score=26.01 Aligned_cols=36 Identities=17% Similarity=0.157 Sum_probs=28.7
Q ss_pred CEEEEEcCCCCCCHHHHHHHHHHHHhCCCeEEEEeC
Q 011792 7 PHVVLLPFPAYGHIKPMLSLAKLFSHAGFRITFVNT 42 (477)
Q Consensus 7 ~~il~~~~~~~GHv~p~l~La~~L~~rGH~Vt~~~~ 42 (477)
.+.+++.+|..|+..-+..+++.|.++|+.|..+-.
T Consensus 22 ~~~vv~~HG~~~~~~~~~~~~~~l~~~G~~v~~~d~ 57 (251)
T 3dkr_A 22 DTGVVLLHAYTGSPNDMNFMARALQRSGYGVYVPLF 57 (251)
T ss_dssp SEEEEEECCTTCCGGGGHHHHHHHHHTTCEEEECCC
T ss_pred CceEEEeCCCCCCHHHHHHHHHHHHHCCCEEEecCC
Confidence 356667777778888889999999999999877543
No 294
>3l6u_A ABC-type sugar transport system periplasmic compo; structural genomics, nysgrc, target 11006S, PSI-2, protein S initiative; 1.90A {Exiguobacterium sibiricum}
Probab=20.24 E-value=4.2e+02 Score=22.85 Aligned_cols=37 Identities=16% Similarity=0.278 Sum_probs=23.9
Q ss_pred HHHHHhcCCCCCeEEEECCCcch----HHHHHHHcCCCeEEEcc
Q 011792 100 FRQLLMTPGRLPTCIISDSIMSF----AIDVAEELNIPIITFRP 139 (477)
Q Consensus 100 l~~~l~~~~~~~D~vI~D~~~~~----~~~~A~~lgiP~v~~~~ 139 (477)
+..++.. ++|.||....... ....+...|||+|.+..
T Consensus 57 ~~~l~~~---~vdgiI~~~~~~~~~~~~~~~~~~~~iPvV~~~~ 97 (293)
T 3l6u_A 57 ILEFVHL---KVDAIFITTLDDVYIGSAIEEAKKAGIPVFAIDR 97 (293)
T ss_dssp HHHHHHT---TCSEEEEECSCTTTTHHHHHHHHHTTCCEEEESS
T ss_pred HHHHHHc---CCCEEEEecCChHHHHHHHHHHHHcCCCEEEecC
Confidence 4444443 8999998665442 23455667999999743
No 295
>4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans}
Probab=20.23 E-value=88 Score=28.24 Aligned_cols=30 Identities=20% Similarity=0.463 Sum_probs=24.6
Q ss_pred CEEEEEcCCCCCCHHHHHHHHHHHHhCCCeEEEEe
Q 011792 7 PHVVLLPFPAYGHIKPMLSLAKLFSHAGFRITFVN 41 (477)
Q Consensus 7 ~~il~~~~~~~GHv~p~l~La~~L~~rGH~Vt~~~ 41 (477)
.||.|+-.|--| .++|+.|.++||+|+++-
T Consensus 6 ~kIgfIGLG~MG-----~~mA~~L~~~G~~V~v~d 35 (297)
T 4gbj_A 6 EKIAFLGLGNLG-----TPIAEILLEAGYELVVWN 35 (297)
T ss_dssp CEEEEECCSTTH-----HHHHHHHHHTTCEEEEC-
T ss_pred CcEEEEecHHHH-----HHHHHHHHHCCCeEEEEe
Confidence 489999887655 579999999999999863
No 296
>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A*
Probab=20.20 E-value=1.5e+02 Score=25.80 Aligned_cols=33 Identities=18% Similarity=0.172 Sum_probs=23.8
Q ss_pred CEEEEEcCCCCCCHHHHHHHHHHHHhCCCeEEEEeC
Q 011792 7 PHVVLLPFPAYGHIKPMLSLAKLFSHAGFRITFVNT 42 (477)
Q Consensus 7 ~~il~~~~~~~GHv~p~l~La~~L~~rGH~Vt~~~~ 42 (477)
-+.++++.++ |-+ =.++++.|+++||+|+++.-
T Consensus 7 ~k~vlVTGas-~gI--G~~ia~~l~~~G~~V~~~~r 39 (260)
T 1nff_A 7 GKVALVSGGA-RGM--GASHVRAMVAEGAKVVFGDI 39 (260)
T ss_dssp TCEEEEETTT-SHH--HHHHHHHHHHTTCEEEEEES
T ss_pred CCEEEEeCCC-CHH--HHHHHHHHHHCCCEEEEEeC
Confidence 3566676655 322 35789999999999998765
No 297
>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}
Probab=20.20 E-value=1e+02 Score=27.63 Aligned_cols=32 Identities=13% Similarity=0.181 Sum_probs=24.5
Q ss_pred CCEEEEEcCCCCCCHHHHHHHHHHHHhCCCeEEEEeC
Q 011792 6 VPHVVLLPFPAYGHIKPMLSLAKLFSHAGFRITFVNT 42 (477)
Q Consensus 6 ~~~il~~~~~~~GHv~p~l~La~~L~~rGH~Vt~~~~ 42 (477)
++||+|+-.|..|. .+|+.|.+.||+|+++..
T Consensus 4 ~~~i~iiG~G~~G~-----~~a~~l~~~g~~V~~~~~ 35 (301)
T 3cky_A 4 SIKIGFIGLGAMGK-----PMAINLLKEGVTVYAFDL 35 (301)
T ss_dssp CCEEEEECCCTTHH-----HHHHHHHHTTCEEEEECS
T ss_pred CCEEEEECccHHHH-----HHHHHHHHCCCeEEEEeC
Confidence 58999997665553 468889999999987654
No 298
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=20.15 E-value=51 Score=30.40 Aligned_cols=39 Identities=18% Similarity=0.175 Sum_probs=28.6
Q ss_pred CCEEEEEcCCCCCCHHHHHHHHHHHHhCCCeEEEEeCCccchhc
Q 011792 6 VPHVVLLPFPAYGHIKPMLSLAKLFSHAGFRITFVNTDQYHDRL 49 (477)
Q Consensus 6 ~~~il~~~~~~~GHv~p~l~La~~L~~rGH~Vt~~~~~~~~~~l 49 (477)
.|||+|+-.|..| ..+|..|++.||+|+++......+.+
T Consensus 3 ~mkI~IiGaG~~G-----~~~a~~L~~~g~~V~~~~r~~~~~~~ 41 (335)
T 3ghy_A 3 LTRICIVGAGAVG-----GYLGARLALAGEAINVLARGATLQAL 41 (335)
T ss_dssp CCCEEEESCCHHH-----HHHHHHHHHTTCCEEEECCHHHHHHH
T ss_pred CCEEEEECcCHHH-----HHHHHHHHHCCCEEEEEEChHHHHHH
Confidence 4789999666544 56789999999999999864333333
No 299
>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*
Probab=20.05 E-value=1.2e+02 Score=26.77 Aligned_cols=33 Identities=18% Similarity=0.226 Sum_probs=25.1
Q ss_pred CEEEEEcCCCCCCHHHHHHHHHHHHhCCCeEEEEeC
Q 011792 7 PHVVLLPFPAYGHIKPMLSLAKLFSHAGFRITFVNT 42 (477)
Q Consensus 7 ~~il~~~~~~~GHv~p~l~La~~L~~rGH~Vt~~~~ 42 (477)
-|+++++.++.| + =.++|+.|+++|++|.+...
T Consensus 28 ~k~vlVTGas~g-I--G~aia~~la~~G~~V~~~~~ 60 (269)
T 4dmm_A 28 DRIALVTGASRG-I--GRAIALELAAAGAKVAVNYA 60 (269)
T ss_dssp TCEEEETTCSSH-H--HHHHHHHHHHTTCEEEEEES
T ss_pred CCEEEEECCCCH-H--HHHHHHHHHHCCCEEEEEeC
Confidence 467888876642 2 35789999999999988765
No 300
>3n0v_A Formyltetrahydrofolate deformylase; formyl transferase, ACT domain, structural genomics, joint C structural genomics, JCSG; HET: MSE; 2.25A {Pseudomonas putida}
Probab=20.04 E-value=4e+02 Score=23.79 Aligned_cols=118 Identities=11% Similarity=0.034 Sum_probs=69.0
Q ss_pred HHHHHHHHHHHhCCCcEEEEEecCCcCCCCCCCCCchhhHhhhcCCCceeeccCHHHHHhcccccccccccCchhHHHHh
Q 011792 303 DQILEFWHGIVNSGKGFLWVIRSDLIDGESGVGPVPAELDQGTKERGCIVSWAPQEEVLAHQAIGGFLTHSGWNSTLESM 382 (477)
Q Consensus 303 ~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~~p~~~ll~~~~~~~~I~HGG~gs~~eal 382 (477)
+.-..+++.++..+..+|+..+. -..+++.+.+..+..+.-. |+++ .=...|.+.+..|+
T Consensus 153 ~~~~~~~~~l~~~~~Dlivla~y--------~~il~~~~l~~~~~~~iNi----------HpSl--LP~~rG~~p~~~Ai 212 (286)
T 3n0v_A 153 GQERKVLQVIEETGAELVILARY--------MQVLSPELCRRLDGWAINI----------HHSL--LPGFKGAKPYHQAY 212 (286)
T ss_dssp HHHHHHHHHHHHHTCSEEEESSC--------CSCCCHHHHHHTTTSEEEE----------EECS--STTCCCSCHHHHHH
T ss_pred HHHHHHHHHHHhcCCCEEEeccc--------ccccCHHHHhhhcCCeEEe----------cccc--ccCCCCccHHHHHH
Confidence 33455777777777888777733 2256766655443322211 1221 11234888999999
Q ss_pred hcCCceecCCccc--hhhhhHHHHhhhhceeeeccCCCCHHHHHHHHHHHHhHhHHHHHHHHHHHH
Q 011792 383 VAGVPMICWPQVG--DQQVNSRCVSEIWKIGFDMKDTCDRSTIEKLVRDLMDNKRDKIMESTVQIA 446 (477)
Q Consensus 383 ~~GvP~l~~P~~~--DQ~~na~rv~~~~G~G~~l~~~~~~~~l~~~v~~ll~~~~~~~~~~a~~l~ 446 (477)
.+|+....+-.+. +..+.+.-+. .--+.+...-|.++|.+.+.++-. .-|.+..+.+.
T Consensus 213 ~~G~~~~G~Tvh~v~~~lD~GpIi~---Q~~~~i~~~dt~~~L~~r~~~~e~---~~l~~av~~~~ 272 (286)
T 3n0v_A 213 NKGVKMVGATAHYINNDLDEGPIIA---QGVEVVDHSHYPEDLIAKGRDIEC---LTLARAVGYHI 272 (286)
T ss_dssp HHTCSEEEEEEEECCSSTTCSCEEE---EEEEECCTTCCHHHHHHHHHHHHH---HHHHHHHHHHH
T ss_pred HcCCCeEEEEEEEEcCCCCCCceeE---EEEEEcCCCCCHHHHHHHHHHHHH---HHHHHHHHHHH
Confidence 9999987776432 4444444442 223444456788888888876644 45555555443
Done!