Query 011794
Match_columns 477
No_of_seqs 124 out of 1450
Neff 8.0
Searched_HMMs 29240
Date Mon Mar 25 15:27:29 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/011794.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/011794hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1kp8_A Groel protein; chaperon 100.0 2E-102 5E-107 826.8 49.9 465 1-467 61-529 (547)
2 1we3_A CPN60(groel); chaperoni 100.0 4E-102 1E-106 825.0 52.2 474 1-476 61-541 (543)
3 3rtk_A 60 kDa chaperonin 2; he 100.0 1E-102 4E-107 825.7 46.4 462 1-466 61-526 (546)
4 1iok_A Chaperonin 60; chaperon 100.0 3E-102 1E-106 824.8 41.4 465 1-467 62-531 (545)
5 3p9d_C T-complex protein 1 sub 100.0 2E-88 6.9E-93 723.6 33.7 434 1-464 70-589 (590)
6 3ruv_A Chaperonin, CPN; double 100.0 4.2E-87 1.4E-91 711.5 39.8 413 1-473 70-531 (543)
7 3ko1_A Chaperonin; 9-fold symm 100.0 1.3E-86 4.6E-91 707.7 40.4 406 1-466 81-538 (553)
8 1a6d_B Thermosome (beta subuni 100.0 4.1E-86 1.4E-90 704.5 39.4 413 1-473 72-535 (543)
9 3aq1_B Thermosome subunit; gro 100.0 3.2E-86 1.1E-90 698.9 37.6 406 1-466 24-481 (500)
10 1q3q_A Thermosome alpha subuni 100.0 8E-86 2.7E-90 702.4 40.5 406 1-466 74-530 (548)
11 3iyg_B T-complex protein 1 sub 100.0 5.1E-85 1.7E-89 691.7 45.7 402 1-463 63-513 (513)
12 3iyg_H T-complex protein 1 sub 100.0 6.2E-85 2.1E-89 690.8 45.1 404 1-461 62-514 (515)
13 3iyg_A T-complex protein 1 sub 100.0 6.6E-85 2.2E-89 693.2 44.0 406 1-461 61-528 (529)
14 1a6d_A Thermosome (alpha subun 100.0 7.9E-86 2.7E-90 702.0 36.9 403 1-464 73-525 (545)
15 3p9d_A T-complex protein 1 sub 100.0 1.7E-85 5.8E-90 700.7 35.9 411 1-466 75-553 (559)
16 3p9d_G T-complex protein 1 sub 100.0 6.6E-86 2.3E-90 702.6 29.2 410 1-468 75-534 (550)
17 3iyg_D T-complex protein 1 sub 100.0 1.4E-83 4.7E-88 681.5 44.2 401 1-461 62-518 (518)
18 3iyg_G T-complex protein 1 sub 100.0 2.1E-83 7.3E-88 679.6 43.7 401 1-461 60-514 (515)
19 3iyg_E T-complex protein 1 sub 100.0 4E-83 1.4E-87 678.1 45.2 400 1-460 61-514 (515)
20 3p9d_D T-complex protein 1 sub 100.0 7.4E-85 2.5E-89 692.1 31.3 405 1-461 70-528 (528)
21 3p9d_B T-complex protein 1 sub 100.0 2E-84 7E-89 689.7 29.5 408 1-469 69-526 (527)
22 3iyg_Q T-complex protein 1 sub 100.0 5.5E-82 1.9E-86 668.8 45.7 400 1-461 62-512 (512)
23 3p9d_E T-complex protein 1 sub 100.0 6.2E-83 2.1E-87 681.4 36.7 409 1-463 96-560 (562)
24 3iyg_Z T-complex protein 1 sub 100.0 4.9E-82 1.7E-86 668.9 42.1 399 1-460 61-516 (517)
25 3p9d_H T-complex protein 1 sub 100.0 1.6E-83 5.5E-88 686.7 24.9 409 1-469 77-556 (568)
26 3p9d_F T-complex protein 1 sub 100.0 2.8E-81 9.6E-86 667.7 30.9 406 1-466 68-542 (546)
27 3m6c_A 60 kDa chaperonin 1; ch 100.0 8.1E-43 2.8E-47 312.6 16.5 193 122-314 2-194 (194)
28 3osx_A 60 kDa chaperonin; alph 100.0 1.5E-41 5E-46 305.0 18.3 189 124-312 11-199 (201)
29 1srv_A Protein (groel (HSP60 c 100.0 2.2E-32 7.7E-37 234.0 15.0 144 127-270 1-144 (145)
30 1gml_A T-complex protein 1 sub 99.9 2E-24 6.8E-29 197.2 12.1 146 118-322 1-174 (178)
31 1ass_A Thermosome; chaperonin, 99.8 1.3E-20 4.3E-25 168.7 11.7 127 125-274 1-154 (159)
32 1gtz_A 3-dehydroquinate dehydr 40.8 1.7E+02 0.0058 25.0 9.4 86 149-236 3-103 (156)
33 2q8p_A Iron-regulated surface 34.2 64 0.0022 29.3 6.2 58 172-234 53-110 (260)
34 1pq4_A Periplasmic binding pro 30.1 1.9E+02 0.0064 27.1 8.8 49 163-214 221-269 (291)
35 1n2z_A Vitamin B12 transport p 25.7 99 0.0034 27.8 5.8 56 172-232 50-106 (245)
36 2ooa_A E3 ubiquitin-protein li 22.8 1.7E+02 0.0059 20.1 4.9 36 36-71 13-51 (52)
37 1s3l_A Hypothetical protein MJ 22.2 1.4E+02 0.0049 25.8 6.0 53 145-197 17-71 (190)
38 4hn9_A Iron complex transport 22.1 1.6E+02 0.0054 27.9 6.8 57 172-234 109-165 (335)
39 3md9_A Hemin-binding periplasm 21.5 2.3E+02 0.0079 25.3 7.5 58 172-234 52-111 (255)
40 2r7a_A Bacterial heme binding 20.2 2.5E+02 0.0085 25.1 7.5 58 172-234 52-112 (256)
No 1
>1kp8_A Groel protein; chaperonin, assisted protein folding, chaperone; HET: ATP; 2.00A {Escherichia coli} SCOP: a.129.1.1 c.8.5.1 d.56.1.1 PDB: 1gr5_A 2c7e_A* 1grl_A 1oel_A 1xck_A 1gru_A 1mnf_A 1aon_A 2c7c_A 2c7d_A 2cgt_A 2nwc_A 3e76_A* 2eu1_A 1j4z_A 1kpo_O 1sx3_A* 3c9v_A 1ss8_A 3cau_A ...
Probab=100.00 E-value=1.5e-102 Score=826.75 Aligned_cols=465 Identities=50% Similarity=0.799 Sum_probs=450.2
Q ss_pred CCCh----HHHHHHHHHHhhhhccCCCcchHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHhccccCCCH
Q 011794 1 MENA----GAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEGR 76 (477)
Q Consensus 1 ~~hp----~akll~~~a~~qd~~~GDGTTt~vvLa~~Ll~~~~~li~~gi~p~~I~~g~~~a~~~~~~~L~~~s~~~~~~ 76 (477)
++|| +|||++++|++||+++||||||+|+|+++||+++.+++++|+||+.|++||++|++.++++|+++++|++++
T Consensus 61 ~~hp~en~~Akll~e~a~~qd~e~GDGTTtvvVLA~~Ll~ea~~lv~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~ 140 (547)
T 1kp8_A 61 LEDKFENMGAQMVKEVASKANDAAGDGTTTATVLAQAIITEGLKAVAAGMNPMDLKRGIDKAVTVAVEELKALSVPCSDS 140 (547)
T ss_dssp CSSHHHHHHHHHHHHHHHHHHHHHSSCHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHHCBCCCSH
T ss_pred ccChhhhHHHHHHHHHHHhhccccCCCcchhHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhCcCCCCH
Confidence 5899 999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhcCCchhHHHHHHHHHHHhCCCCcccccCCCccccceEEEEeeEEcccccCCCCccCccccchhccceeEE
Q 011794 77 DDIKAVATISAGNDDLIGTMIADAIDKVGPDGVLSIESSSSFETTVEVEEGMEIDRGYISPQFVTNPEKLIVEFENARVL 156 (477)
Q Consensus 77 ~~l~~va~ts~~~~~~~a~lv~~av~~v~~~~~I~i~~g~~~~ds~~~i~G~~~~~~~~~p~~~~~~~~~~~~~~~~~Il 156 (477)
+.|.++|++|++++++|++++++|+.+++++|.|++++|++++||+++++|++|+++|.||||+++|++|+.+++||+|+
T Consensus 141 e~l~~vA~iS~~~~~~i~~liadAv~~V~~dg~I~Ve~G~~~~ds~~lveG~~fdkg~~~p~~vt~~~~m~~~lenp~Il 220 (547)
T 1kp8_A 141 KAIAQVGTISANSDETVGKLIAEAMDKVGKEGVITVEDGTGLQDELDVVEGMQFDRGYLSPYFINKPETGAVELESPFIL 220 (547)
T ss_dssp HHHHHHHHHHTTSCHHHHHHHHHHHHHHCTTSEEEEECCSSSSCEEEEESCEEESCCBSSTTCCSBTTTTBEEEESCEEE
T ss_pred HHHHHHHHHhccchhHHHHHHHHHHHHhCcCCcEEEEeCCccccccEEEecEEEecCccccccccCcccCceEecCceEE
Confidence 99999999999999999999999999999999999999999999989999999999999999999999999999999999
Q ss_pred EeccccCCHHhHHHHHHHHHhcCCCEEEEeccccHHHHHHHHHhhhcccceEEEeeCCCcchhhhHHHHHHHHHhCceEe
Q 011794 157 VTDQKISAIKDIIPLLEKTTQLRAPLLIIAEDVTGEALATLVVNKLRGILNVAAIKAPGFGERRKALLQDIAIVTGAEFQ 236 (477)
Q Consensus 157 l~~~~i~~~~~l~~~l~~i~~~~~~lvi~~~~i~~~al~~l~~n~~~~~~~v~av~~~~~~~~~~~~l~~ia~~tGa~~~ 236 (477)
++|++|+++++++++++++.++|+||||++++|+++++++|+.|+++|.++|+|||+|+|+++++++|+|||++|||+++
T Consensus 221 l~d~~Is~~~~l~~~le~i~~~g~~lvIi~~~I~~~Al~~L~~n~irg~~~v~aVk~~~~~~~rk~~le~ia~~tG~~ii 300 (547)
T 1kp8_A 221 LADKKISNIREMLPVLEAVAKAGKPLLIIAEDVEGEALATLVVNTMRGIVKVAAVKAPGFGDRRKAMLQDIATLTGGTVI 300 (547)
T ss_dssp CEESEECCGGGTHHHHHHHHGGGCCEEEEESEECHHHHHHHHHHGGGTSSCEEEEECSSCHHHHHHHHHHHHHHHTCCCE
T ss_pred EEcCcCCCHHHHHHHHHHHHhcCCCEEEECCCcCHHHHHHHHhcccccceeEEEEeccccccccHHHHHHHHHHhCCeEe
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCcccCCCccCCccceEEEEecccEEEEeCCCChHHHHHHHHHHHHHHhhccchhhHHHHHHHHHHhcCCeEEEEe
Q 011794 237 AGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKV 316 (477)
Q Consensus 237 ~~~~~~~~~~~~~~~lG~~~~v~~~~~~~~~~~~~~~~~~~~~~i~~l~~~l~~~~~~~~~~~l~~r~~~l~~~~~tI~v 316 (477)
+++.++++++++.++||+|+.|++++++++||++|+++..+++|+++|+.+++.+.++|+|++|++|+++|+|++|||+|
T Consensus 301 ~~~~g~~l~~~~~~~LG~a~~v~~~~~~~~~i~g~~~~~~i~~r~~~i~~~~~~~~s~~~~ekl~erlakl~~~~~tI~v 380 (547)
T 1kp8_A 301 SEEIGMELEKATLEDLGQAKRVVINKDTTTIIDGVGEEAAIQGRVAQIRQQIEEATSDYDREKLQERVAKLAGGVAVIKV 380 (547)
T ss_dssp EGGGTCCSTTCCTTTSEEEEEEEECSSCEEEEEECCCHHHHHHHHHHHHHHHHSCCSHHHHHHHHHHHHHHHHCEEEEEC
T ss_pred cccccCCcccCCHHHCCceeEEEEccceEEEEcCCCCHHHHHHHHHHHHHHhhcccchhhHHHHHHHHHHhcCCeEEEEE
Confidence 98788889999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCHHHHHHHHHHHHHHHHHHHHHHHcCCcCCCcHHHHHHHHhhhhhhccCCchhHHHHHHHHHHHHHHHHHHHHHHcC
Q 011794 317 GAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAG 396 (477)
Q Consensus 317 ~G~t~~~~~e~~~~~~dal~~~~~~l~~gvvpGGGa~e~~~s~~L~~~~~~~~~~~~~~~i~~~a~AL~~ip~~L~~NaG 396 (477)
||+|+.+++|++|+++||++++|+++++|+|||||++|++++++|++++. .++. +++++++|++||+.||++|++|||
T Consensus 381 rG~te~~l~E~kr~i~DAl~~~r~av~~giVpGGGa~e~~~s~~L~~~~~-~~g~-~q~~i~~~a~ALe~ip~~la~NaG 458 (547)
T 1kp8_A 381 GAATEVEMKEKKARVEDALHATRAAVEEGVVAGGGVALIRVASKLADLRG-QNAD-QNVGIKVALRAMEAPLRQIVLNCG 458 (547)
T ss_dssp CCSSHHHHHHHHHHHHHHHHHHHHHHHHCEEETTTHHHHHHHHHTTTCCC-SSHH-HHHHHHHHHHHTTHHHHHHHHHHT
T ss_pred cCCcHhHHHHHHHHHHHHHHHHHHhccCCEEeCCcHHHHHHHHHHHHHhc-cCch-HHHHHHHHHHHHHHHHHHHHHHcC
Confidence 99999999999999999999999999999999999999999999999876 5554 589999999999999999999999
Q ss_pred CChHHHHHHHHccCCceeEEcCCCcccccccCCcccchHHHHHHHHHHHHHHHHHhchhhhhhcCCCCCCC
Q 011794 397 VEGEVVVEKVKDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAIVVEKPKPKTP 467 (477)
Q Consensus 397 ~d~~~~l~~l~~~~~~~G~d~~~g~i~d~~~~gI~dp~~vk~~al~~A~e~a~~lL~iD~iI~~~~~~~~~ 467 (477)
+|+.+++++|++.+.++|||..+|++.||++.|||||+.||+++|+.|+|+|++|||+|++|..+|+++.|
T Consensus 459 ~d~~~vv~~l~~~~~~~G~d~~~g~~~dm~~~gI~Dp~~vk~~al~~A~~~A~~iL~id~iI~~~~~~~~~ 529 (547)
T 1kp8_A 459 EEPSVVANTVKGGDGNYGYNAATEEYGNMIDMGILDPTKVTRSALQYAASVAGLMITTECMVTDLPKNDAA 529 (547)
T ss_dssp SCHHHHHHHHHHSCTTEEEETTTTEEEETTTTTCEEEHHHHHHHHHHHHHHHHHHHTEEEEEEECCC----
T ss_pred CCHHHHHHHHHhcCCCEeEeCCCCccccchhcCceechHhHHHHHHHHHHHHHHHHhHhheeecCCccCCC
Confidence 99999999999877889999999999999999999999999999999999999999999999998887633
No 2
>1we3_A CPN60(groel); chaperonin, chaperone, groel, HSP60, HSP10, folding, ADP, ATP; HET: ADP; 2.80A {Thermus thermophilus} SCOP: a.129.1.1 c.8.5.1 d.56.1.1 PDB: 1wf4_a*
Probab=100.00 E-value=3.5e-102 Score=825.03 Aligned_cols=474 Identities=54% Similarity=0.825 Sum_probs=450.4
Q ss_pred CCCh----HHHHHHHHHHhhhhccCCCcchHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHhccccCCCH
Q 011794 1 MENA----GAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEGR 76 (477)
Q Consensus 1 ~~hp----~akll~~~a~~qd~~~GDGTTt~vvLa~~Ll~~~~~li~~gi~p~~I~~g~~~a~~~~~~~L~~~s~~~~~~ 76 (477)
++|| +|||++++|++||+++||||||+|+|+++||+++.+++++|+||+.|++||++|++.++++|+++++|++++
T Consensus 61 ~~hp~en~~Akll~e~a~~qd~e~GDGTTtvvVLA~~LL~ea~~li~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~ 140 (543)
T 1we3_A 61 LEDHLENIGAQLLKEVASKTNDVAGDGTTTATVLAQAIVREGLKNVAAGANPLALKRGIEKAVEAAVEKIKALAIPVEDR 140 (543)
T ss_dssp CSSHHHHHHHHHHHHHHHHHHHHHSSCHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHTCBCCCSH
T ss_pred cCChHHhHHHHHHHHHHHhhheecCCCcchHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhcccCCCH
Confidence 5899 999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhcCCchhHHHHHHHHHHHhCCCCcccccCCCccccceEEEEeeEEcccccCCCCccCccccchhccceeEE
Q 011794 77 DDIKAVATISAGNDDLIGTMIADAIDKVGPDGVLSIESSSSFETTVEVEEGMEIDRGYISPQFVTNPEKLIVEFENARVL 156 (477)
Q Consensus 77 ~~l~~va~ts~~~~~~~a~lv~~av~~v~~~~~I~i~~g~~~~ds~~~i~G~~~~~~~~~p~~~~~~~~~~~~~~~~~Il 156 (477)
+.|.++|++|++ +++|++++++|+.+++++|.|++++|++++||+++++|++|+++|.||||+++|++|+.+++||+|+
T Consensus 141 ~~l~~vA~iS~~-~~~i~~li~dAv~~V~~~g~I~Ve~G~~~~ds~~lv~G~~~dkg~~~p~~vt~~~~m~~~~en~~Il 219 (543)
T 1we3_A 141 KAIEEVATISAN-DPEVGKLIADAMEKVGKEGIITVEESKSLETELKFVEGYQFDKGYISPYFVTNPETMEAVLEDAFIL 219 (543)
T ss_dssp HHHHHHHHHHHT-CHHHHHHHHHHHHTTCTTSEEEEEECSSSSCEEEEECSEEESCCBSSGGGCSBTTTTBCCEEEEEEE
T ss_pred HHHHHhhhhhcC-CHHHHHHHHHHHHHhCcCCcEEEecCCccccceEEEcCEEEecCccccccccCcccCceeecCceEE
Confidence 999999999997 8999999999999999999999999999999989999999999999999999999999999999999
Q ss_pred EeccccCCHHhHHHHHHHHHhcCCCEEEEeccccHHHHHHHHHhhhcccceEEEeeCCCcchhhhHHHHHHHHHhCceEe
Q 011794 157 VTDQKISAIKDIIPLLEKTTQLRAPLLIIAEDVTGEALATLVVNKLRGILNVAAIKAPGFGERRKALLQDIAIVTGAEFQ 236 (477)
Q Consensus 157 l~~~~i~~~~~l~~~l~~i~~~~~~lvi~~~~i~~~al~~l~~n~~~~~~~v~av~~~~~~~~~~~~l~~ia~~tGa~~~ 236 (477)
++|++|+++++++++++++.++|+||||++++|+++++++|+.|+++|.++|+|||+|+|+++++++|+|||++|||+++
T Consensus 220 l~d~~Is~~~~l~~~le~i~~~g~~lvii~~~I~~~Al~~L~~n~irg~~~v~aVk~~~~~~~~~~~le~ia~~tGa~ii 299 (543)
T 1we3_A 220 IVEKKVSNVRELLPILEQVAQTGKPLLIIAEDVEGEALATLVVNKLRGTLSVAAVKAPGFGDRRKEMLKDIAAVTGGTVI 299 (543)
T ss_dssp EESSCBCCHHHHHHHHHHHHTTTCCEEEEESCBCHHHHHHHHHHHHHTSCCEEEEECSSSHHHHHHHHHHHHHHHCCCCB
T ss_pred EECCCcCCHHHHHHHHHHHHhcCCCEEEEcCCccHHHHHHHHHhccccceeEEEEeccchhhhhHHHHHHHHHHhCCcee
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCcccCCCccCCccceEEEEecccEEEEeCCCChHHHHHHHHHHHHHHhhccchhhHHHHHHHHHHhcCCeEEEEe
Q 011794 237 AGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKV 316 (477)
Q Consensus 237 ~~~~~~~~~~~~~~~lG~~~~v~~~~~~~~~~~~~~~~~~~~~~i~~l~~~l~~~~~~~~~~~l~~r~~~l~~~~~tI~v 316 (477)
++..++++++++.++||+|+.|++++++++||++|+++..+++|+++|+.+++.+.++|+++++++|+++|+|++|||+|
T Consensus 300 ~~~~g~~l~~~~~~~LG~a~~v~~~~~~~~~i~g~~~~~~i~~r~~~i~~~~~~~~s~~~~e~l~erlakl~~~~~tI~l 379 (543)
T 1we3_A 300 SEELGFKLENATLSMLGRAERVRITKDETTIVGGKGKKEDIEARINGIKKELETTDSEYAREKLQERLAKLAGGVAVIRV 379 (543)
T ss_dssp CTTTTCCGGGCCGGGCEEEEEEEECSSCEEEEEECCCHHHHHHHHHHHHHHHTTCCSHHHHHHHHHHHHHHTTCEEEEEE
T ss_pred eccccCCcccCCHHHCCCceEEEEEcCEEEEEcCCCCHHHHHHHHHHHHHHhhccCchhHHHHHHHHHHhccCCeEEEEe
Confidence 98888889999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCHHHHHHHHHHHHHHHHHHHHHHHcCCcCCCcHHHHHHHHhhhhhhccCCchhHHHHHHHHHHHHHHHHHHHHHHcC
Q 011794 317 GAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAG 396 (477)
Q Consensus 317 ~G~t~~~~~e~~~~~~dal~~~~~~l~~gvvpGGGa~e~~~s~~L~~~~~~~~~~~~~~~i~~~a~AL~~ip~~L~~NaG 396 (477)
||+|+.+++|++|+++||++++|+++++|+|||||++|++++++|++++.+.++. +++++++|++||+.||++|++|||
T Consensus 380 rG~te~~l~E~~r~i~DAl~~~r~av~~giVpGGGa~e~~~s~~L~~~~~~~~g~-~q~~i~~~a~ALe~ip~~La~NaG 458 (543)
T 1we3_A 380 GAATETELKEKKHRFEDALNATRAAVEEGIVPGGGVTLLRAISAVEELIKKLEGD-EATGAKIVRRALEEPARQIAENAG 458 (543)
T ss_dssp CCSSHHHHHHHHHHHHHHHHHHHHHHHHCEEETTTHHHHHHHHHHHHHHTTCCHH-HHHHHHHHHHHTTHHHHHHHHHHT
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHhccCcCCCccHHHHHHHHHHHHHhhccCch-HHHHHHHHHHHHHHHHHHHHHHCC
Confidence 9999999999999999999999999999999999999999999999998776665 489999999999999999999999
Q ss_pred CChHHHHHHHHc--cCCceeEEcCCCcccccccCCcccchHHHHHHHHHHHHHHHHHhchhhhhhcCCCCCCCCC-CCCC
Q 011794 397 VEGEVVVEKVKD--SEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAIVVEKPKPKTPVA-APPQ 473 (477)
Q Consensus 397 ~d~~~~l~~l~~--~~~~~G~d~~~g~i~d~~~~gI~dp~~vk~~al~~A~e~a~~lL~iD~iI~~~~~~~~~~~-~~~~ 473 (477)
+|+.+++++|++ ++.++|||..+|++.||++.|||||+.+|+++|+.|+|+|++|||+|++|..+|++.+.+| .+|+
T Consensus 459 ~d~~~vv~~l~~~h~~~~~G~d~~~g~~~dm~~~gI~dp~~vk~~al~~A~e~a~~iL~id~iI~~~~~~~~~~~~~~~~ 538 (543)
T 1we3_A 459 YEGSVIVQQILAETKNPRYGFNAATGEFVDMVEAGIVDPAKVTRSALQNAASIGALILTTEAVVAEKPEKKESTPASAGA 538 (543)
T ss_dssp SCHHHHHHHHHHCCSCTTEEEETTTTEEEETTTTTCEEEHHHHHHHHHHHHHHHHHHHTEEEEEEECSCC----------
T ss_pred CCHHHHHHHHHHhcCCCCEEEeCCCCeecccccCCcCccHHHHHHHHHHHHHHHHHHHHHHHHhhcCCccCCCCCCCCCC
Confidence 999999999998 5678999999999999999999999999999999999999999999999999887654333 4443
Q ss_pred CCC
Q 011794 474 GLM 476 (477)
Q Consensus 474 ~~~ 476 (477)
|-|
T Consensus 539 ~~~ 541 (543)
T 1we3_A 539 GDM 541 (543)
T ss_dssp ---
T ss_pred CCC
Confidence 433
No 3
>3rtk_A 60 kDa chaperonin 2; heat shock protein, chaperone; 2.80A {Mycobacterium tuberculosis} PDB: 1sjp_A
Probab=100.00 E-value=1.1e-102 Score=825.71 Aligned_cols=462 Identities=53% Similarity=0.807 Sum_probs=429.0
Q ss_pred CCChH----HHHHHHHHHhhhhccCCCcchHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHhccccCCCH
Q 011794 1 MENAG----AALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEGR 76 (477)
Q Consensus 1 ~~hp~----akll~~~a~~qd~~~GDGTTt~vvLa~~Ll~~~~~li~~gi~p~~I~~g~~~a~~~~~~~L~~~s~~~~~~ 76 (477)
++||+ |||++++|++||+++||||||+|+||++||+++.+++++|+||+.|++||++|++.++++|+++++|++++
T Consensus 61 v~hp~~n~gAkll~e~a~~qd~e~GDGTTtvvVLAgeLL~ea~~li~~GihP~~I~~G~~~A~~~a~e~L~~~s~~v~~~ 140 (546)
T 3rtk_A 61 LEDPYEKIGAELVKEVAKKTDDVAGDGTTTATVLAQALVREGLRNVAAGANPLGLKRGIEKAVEKVTETLLKGAKEVETK 140 (546)
T ss_dssp CCCHHHHHHHHHHHHHHTSCC-------CHHHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHHTCBCCCSH
T ss_pred CCChhhhHHHHHHHHHHHhhhhhhCCCcchHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhcccCCCh
Confidence 58997 99999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhcCCchhHHHHHHHHHHHhCCCCcccccCCCccccceEEEEeeEEcccccCCCCccCccccchhccceeEE
Q 011794 77 DDIKAVATISAGNDDLIGTMIADAIDKVGPDGVLSIESSSSFETTVEVEEGMEIDRGYISPQFVTNPEKLIVEFENARVL 156 (477)
Q Consensus 77 ~~l~~va~ts~~~~~~~a~lv~~av~~v~~~~~I~i~~g~~~~ds~~~i~G~~~~~~~~~p~~~~~~~~~~~~~~~~~Il 156 (477)
+.|.++|++|++ ++.+++++++|+.+++.+|.|+++.++...+.+++++|++|+++|.||||+++|++|+++++||+|+
T Consensus 141 e~L~~vA~iS~~-~~~i~~liadAv~~V~~dgvI~Ve~~~~~~~ds~lveGm~fdkg~~sp~~vt~~e~m~~~len~kIl 219 (546)
T 3rtk_A 141 EQIAATAAISAG-DQSIGDLIAEAMDKVGNEGVITVEESNTFGLQLELTEGMRFDKGYISGYFVTDPERQEAVLEDPYIL 219 (546)
T ss_dssp HHHHHHHHHHHT-CHHHHHHHHHHHHHSCTTSEEEEECCSSSSCEEEEECEEEESCCBSSGGGCSBTTTTBEEEESCEEE
T ss_pred HHHHhHeEEeCC-chHHHHHHHHHHHHhccCCceEEEecCCcccceEEeeeEEEcCCccCcccccCcccCeeEecccEEE
Confidence 999999999997 8999999999999999999999887766543349999999999999999999999999999999999
Q ss_pred EeccccCCHHhHHHHHHHHHhcCCCEEEEeccccHHHHHHHHHhhhcccceEEEeeCCCcchhhhHHHHHHHHHhCceEe
Q 011794 157 VTDQKISAIKDIIPLLEKTTQLRAPLLIIAEDVTGEALATLVVNKLRGILNVAAIKAPGFGERRKALLQDIAIVTGAEFQ 236 (477)
Q Consensus 157 l~~~~i~~~~~l~~~l~~i~~~~~~lvi~~~~i~~~al~~l~~n~~~~~~~v~av~~~~~~~~~~~~l~~ia~~tGa~~~ 236 (477)
++|++|+++++++++++++.++|+||||++++|+++++++|+.|+++|+++|++||+|+|++.++++|+|||++|||+++
T Consensus 220 l~d~kIs~~~~l~~~le~I~~~g~~lvIi~~~I~~~Al~~L~~n~lrg~~~v~aVk~~~~~~~rk~~le~ia~~tG~~ii 299 (546)
T 3rtk_A 220 LVSSKVSTVKDLLPLLEKVIGAGKPLLIIAEDVEGEALSTLVVNKIRGTFKSVAVKAPGFGDRRKAMLQDMAILTGGQVI 299 (546)
T ss_dssp EBSSEECCSTTTHHHHHHHHTTTCCEEEEESEECHHHHHHHHHHHHHSSCCEEEEECSSCHHHHHHHHHHHHHHHTCCCB
T ss_pred EECCccCCHHHHHHHHHHHHhcCCCEEEEcCCCCHHHHHHHHHhCCCCceEEEEeccccccccchhhHHHHHHHhCCEEe
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCcccCCCccCCccceEEEEecccEEEEeCCCChHHHHHHHHHHHHHHhhccchhhHHHHHHHHHHhcCCeEEEEe
Q 011794 237 AGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKV 316 (477)
Q Consensus 237 ~~~~~~~~~~~~~~~lG~~~~v~~~~~~~~~~~~~~~~~~~~~~i~~l~~~l~~~~~~~~~~~l~~r~~~l~~~~~tI~v 316 (477)
++..++++++++.++||+|+.|++++++++||++|+++..+++|+++|+++++++.++|++++|++|+++|+|++|||+|
T Consensus 300 ~~~~~~~l~~~~~~~LG~a~~v~i~~d~~~~i~g~~~~~~i~~r~~~i~~~~~~~~s~~~~ekl~erlakl~g~~atI~v 379 (546)
T 3rtk_A 300 SEEVGLTLENADLSLLGKARKVVVTKDETTIVEGAGDTDAIAGRVAQIRQEIENSDSDYDREKLQERLAKLAGGVAVIKA 379 (546)
T ss_dssp CSSSSCCSTTCCTTTSEEEEEEEECSSCEEEEEECSCHHHHHHHHHHHHHHHHTCSCHHHHHHHHHHHHHHHHCEEEEEC
T ss_pred eccccCccccCCHhhCCeeEEEEEcCCeEEEEcCCCCHHHHHHHHHHHHHHHhhccchhhHHHHHHHHHHhcCCeEEEEe
Confidence 98888899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCHHHHHHHHHHHHHHHHHHHHHHHcCCcCCCcHHHHHHHHhhhhhhccCCchhHHHHHHHHHHHHHHHHHHHHHHcC
Q 011794 317 GAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAG 396 (477)
Q Consensus 317 ~G~t~~~~~e~~~~~~dal~~~~~~l~~gvvpGGGa~e~~~s~~L~~~~~~~~~~~~~~~i~~~a~AL~~ip~~L~~NaG 396 (477)
||+|+.+++|++|+++||++++|+++++|+|||||++|++++++|++++ .++.+ |+++++|++||+.||++|++|||
T Consensus 380 rG~te~~l~E~er~l~DAl~a~r~av~~giVpGGGa~e~~~s~~L~~~~--~~g~e-q~~i~~~a~ALe~ip~~La~NaG 456 (546)
T 3rtk_A 380 GAATEVELKERKHRIEDAVRNAKAAVEEGIVAGGGVTLLQAAPTLDELK--LEGDE-ATGANIVKVALEAPLKQIAFNSG 456 (546)
T ss_dssp CCCSSTHHHHHHHHHHHHHHHHHHHHHHCEEETTTHHHHTTGGGSTTSC--CCTTH-HHHHHHHHHHTTHHHHHHHTTTT
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHhCCcccCCcHHHHHHHHHHHHhc--cccHH-HHHHHHHHHHHHHHHHHHHHHcC
Confidence 9999999999999999999999999999999999999999999999987 56654 89999999999999999999999
Q ss_pred CChHHHHHHHHccCCceeEEcCCCcccccccCCcccchHHHHHHHHHHHHHHHHHhchhhhhhcCCCCCC
Q 011794 397 VEGEVVVEKVKDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAIVVEKPKPKT 466 (477)
Q Consensus 397 ~d~~~~l~~l~~~~~~~G~d~~~g~i~d~~~~gI~dp~~vk~~al~~A~e~a~~lL~iD~iI~~~~~~~~ 466 (477)
+|+.+++++|++....+|||..+|++.||++.|||||+.||+++|+.|+|+|++|||+|++|..+|++++
T Consensus 457 ~d~~~vv~~l~~~~~~~G~d~~~g~~~Dm~~~gI~dp~~vk~~al~~A~e~A~~iL~id~iI~~~~~~~~ 526 (546)
T 3rtk_A 457 LEPGVVAEKVRNLPAGHGLNAQTGVYEDLLAAGVADPVKVTRSALQNAASIAGLFLTTEAVVADKPEKEK 526 (546)
T ss_dssp CCHHHHHHHHHHSCTTEECCSSSCCCEETTTTTCEEEHHHHHHHHHHHHHHHHHHHHCC-----------
T ss_pred CCHHHHHHHHHhhcCCEeEcCCCCcEeeHHHcCCEecHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCC
Confidence 9999999999986666999999999999999999999999999999999999999999999999988764
No 4
>1iok_A Chaperonin 60; chaperone; 3.20A {Paracoccus denitrificans} SCOP: a.129.1.1 c.8.5.1 d.56.1.1
Probab=100.00 E-value=3.2e-102 Score=824.85 Aligned_cols=465 Identities=53% Similarity=0.845 Sum_probs=407.2
Q ss_pred CCCh----HHHHHHHHHHhhhhccCCCcchHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHhccccCCCH
Q 011794 1 MENA----GAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEGR 76 (477)
Q Consensus 1 ~~hp----~akll~~~a~~qd~~~GDGTTt~vvLa~~Ll~~~~~li~~gi~p~~I~~g~~~a~~~~~~~L~~~s~~~~~~ 76 (477)
++|| +|||++++|++||+++||||||+|+|+++||+++.+++.+|+||+.|++||+.|++.++++|+++++|+++.
T Consensus 62 ~~hp~en~~Akll~e~a~~qd~e~GDGTTtvvVLA~~Ll~ea~~li~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~ 141 (545)
T 1iok_A 62 LSDKFENMGAQMVREVASRTNDEAGDGTTTATVLAQAIVREGLKAVAAGMNPMDLKRGIDVATAKVVEAIKSAARPVNDS 141 (545)
T ss_dssp CSSHHHHHHHHHHHHHHHHGGGGCSTHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTCBCCCST
T ss_pred cCChhhHHHHHHHHHHHHhhccccCCCcchHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhcccCCCH
Confidence 5899 999999999999999999999999999999999999999999999999999999999999999999999988
Q ss_pred HHHHHHHHHhcCCchhHHHHHHHHHHHhCCCCcccccCCCccccceEEEEeeEEcccccCCCCccCccccchhccceeEE
Q 011794 77 DDIKAVATISAGNDDLIGTMIADAIDKVGPDGVLSIESSSSFETTVEVEEGMEIDRGYISPQFVTNPEKLIVEFENARVL 156 (477)
Q Consensus 77 ~~l~~va~ts~~~~~~~a~lv~~av~~v~~~~~I~i~~g~~~~ds~~~i~G~~~~~~~~~p~~~~~~~~~~~~~~~~~Il 156 (477)
+.|.++|++|++++++|++++++|+.+++++|.|++++|++++||+++++|++|+++|.||||+++|++|+.+++||+|+
T Consensus 142 e~l~~va~iS~~~~~~i~~li~dAv~~V~~~g~I~Ve~G~~~~ds~~lveG~~~dkg~~~p~~vt~~~~m~~~~en~~Il 221 (545)
T 1iok_A 142 SEVAQVGTISANGESFIGQQIAEAMQRVGNEGVITVEENKGMETEVEVVEGMQFDRGYLSPYFVTNADKMIAELEDAYIL 221 (545)
T ss_dssp TTTTHHHHHTTTTCHHHHHHHHHHHHHHCTTSCCCCEECSSSCCEEEEECCEECSCCCSCGGGCCCSSSSCEEEEEEEEE
T ss_pred HHHHHHHHhhcCCchhHHHHHHHHHHHhccCCeEEEEeCCccccceEEEecEEEecCccccccccCcccCceeecCCeEE
Confidence 89999999999999999999999999999999999999999999989999999999999999999999999999999999
Q ss_pred EeccccCCHHhHHHHHHHHHhcCCCEEEEeccccHHHHHHHHHhhhcccceEEEeeCCCcchhhhHHHHHHHHHhCceEe
Q 011794 157 VTDQKISAIKDIIPLLEKTTQLRAPLLIIAEDVTGEALATLVVNKLRGILNVAAIKAPGFGERRKALLQDIAIVTGAEFQ 236 (477)
Q Consensus 157 l~~~~i~~~~~l~~~l~~i~~~~~~lvi~~~~i~~~al~~l~~n~~~~~~~v~av~~~~~~~~~~~~l~~ia~~tGa~~~ 236 (477)
++|++|+++++++++++++.++|+||||++++|+++++++|+.|+++|.++|+|||+|+|+++++++|+|||++|||+++
T Consensus 222 l~d~~I~~~~~l~~~le~i~~~g~~lvIi~~~I~~~Al~~L~~n~irg~~~v~aVk~~~~~~~~~~~le~ia~~tGa~ii 301 (545)
T 1iok_A 222 LHEKKLSSLQPMVPLLESVIQSQKPLLIVAEDVEGEALATLVVNKLRGGLKIAAVKAPGFGDRRKAMLQDIAILTGGQVI 301 (545)
T ss_dssp ECSSCBCCCCC-----------CCCCEEEESCBC-----------------CEEEECSCCTTHHHHHHHHHHHHHTC---
T ss_pred EEcCCcCCHHHHHHHHHHHHhcCCCEEEECCCcCHHHHHHHHHccccccceeEEEecchhhhccHHHHHHHHHhcCCeee
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCcccCCCccCCccceEEEEecccEEEEeCCCChHHHHHHHHHHHHHHhhccchhhHHHHHHHHHHhcCCeEEEEe
Q 011794 237 AGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKV 316 (477)
Q Consensus 237 ~~~~~~~~~~~~~~~lG~~~~v~~~~~~~~~~~~~~~~~~~~~~i~~l~~~l~~~~~~~~~~~l~~r~~~l~~~~~tI~v 316 (477)
+++.+++++++++++||+|+.|++++++|+||++|+++..+++|+++++.+++.+.++|+|++|++|+++|+|++|||+|
T Consensus 302 ~~~~~~~l~~~~~~~LG~a~~v~~~~~~~~~i~g~~~~~~i~~r~~~i~~~~~~~~s~~~~ekl~erlakl~~~~~tI~l 381 (545)
T 1iok_A 302 SEDLGMKLENVTIDMLGRAKKVSINKDNTTIVDGAGEKAEIEARVSQIRQQIEETTSDYDREKLQERVAKLAGGVAVIRV 381 (545)
T ss_dssp ------------CTTSEEEEEEEECSSCEEEESCCCCHHHHHHHHHHHHHHHTTCCCSSHHHHHHHHHHTTSSCEEEEEE
T ss_pred cccccCCcccCCHHHcCcCcEEEEecCEEEEEeCCCCHHHHHHHHHHHHHHHhccCchhhHHHHHHHHHhccCCeEEEEe
Confidence 98778889999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCHHHHHHHHHHHHHHHHHHHHHHHcCCcCCCcHHHHHHHHhhhhhhccCCchhHHHHHHHHHHHHHHHHHHHHHHcC
Q 011794 317 GAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAG 396 (477)
Q Consensus 317 ~G~t~~~~~e~~~~~~dal~~~~~~l~~gvvpGGGa~e~~~s~~L~~~~~~~~~~~~~~~i~~~a~AL~~ip~~L~~NaG 396 (477)
||+|+.+++|++|+++||++++|+++++|+|||||++|++++++|++++. .++. +++++++|++||+.||++|++|||
T Consensus 382 rG~te~~l~E~kr~i~DAl~~~r~av~~giVpGGGa~e~~~s~~L~~~~~-~~g~-~q~~i~~~a~ALe~ip~~La~NaG 459 (545)
T 1iok_A 382 GGMTEIEVKERKDRVDDALNATRAAVQEGIVVGGGVALVQGAKVLEGLSG-ANSD-QDAGIAIIRRALEAPMRQIAENAG 459 (545)
T ss_dssp CCSSHHHHHHHHHHHHHHHHHHHHHHHHCEEETTTHHHHHHGGGGGSCCC-SSHH-HHHHHHHHHHHTTHHHHHHHHHHT
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHhhcCCCCCchHHHHHHHHHHHHHhc-cCch-HHHHHHHHHHHHHHHHHHHHHHcC
Confidence 99999999999999999999999999999999999999999999999876 5554 589999999999999999999999
Q ss_pred CChHHHHHHHHcc-CCceeEEcCCCcccccccCCcccchHHHHHHHHHHHHHHHHHhchhhhhhcCCCCCCC
Q 011794 397 VEGEVVVEKVKDS-EWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAIVVEKPKPKTP 467 (477)
Q Consensus 397 ~d~~~~l~~l~~~-~~~~G~d~~~g~i~d~~~~gI~dp~~vk~~al~~A~e~a~~lL~iD~iI~~~~~~~~~ 467 (477)
+|+.+++++|++. ++++|||..+|++.||++.|||||+.||+++|+.|+|+|++|||+|++|..+|+++++
T Consensus 460 ~d~~~vv~~l~~~~~~~~G~d~~~g~~~dm~~~gI~dp~~vk~~al~~A~~~A~~iL~id~iI~~~~~~~~~ 531 (545)
T 1iok_A 460 VDGAVVAGKVRESSDKAFGFNAQTEEYGDMFKFGVIDPAKVVRTALEDAASVAGLLITTEAMIAEKPEPKAP 531 (545)
T ss_dssp SCHHHHHHHHHSCCSTTEEEETTTTEEEEHHHHTCEEEHHHHHHHHHHHHHHHHHHHTEEEEEEECC-----
T ss_pred CCHHHHHHHHHhhcCCCeeEeCCCCcccchHhcCcEEccHHHHHHHHHHHHHHHHHHhHHHhhccCCccCCC
Confidence 9999999999986 6789999999999999999999999999999999999999999999999998876543
No 5
>3p9d_C T-complex protein 1 subunit gamma; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_c* 4d8q_C* 4d8r_c* 2bbm_B 2bbn_B
Probab=100.00 E-value=2e-88 Score=723.62 Aligned_cols=434 Identities=20% Similarity=0.284 Sum_probs=370.0
Q ss_pred CCChHHHHHHHHHHhhhhccCCCcchHHHHHHHHHHHHHHH-HhCCCChHHHHHHHHHHHHHHHHHHHhccccCC--CHH
Q 011794 1 MENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLS-VTSGANPVSLKRGIDKTVHGLVEELEKRARPIE--GRD 77 (477)
Q Consensus 1 ~~hp~akll~~~a~~qd~~~GDGTTt~vvLa~~Ll~~~~~l-i~~gi~p~~I~~g~~~a~~~~~~~L~~~s~~~~--~~~ 77 (477)
++||+|||++++|++||+++||||||+|+||++||+++.++ +.+|+||+.|++||++|++.++++|+++++|++ +++
T Consensus 70 ~~hP~Akll~e~a~~qd~e~GDGTTtvvVLA~eLL~~a~~l~l~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~~~e 149 (590)
T 3p9d_C 70 VAHPAAKSMLELSRTQDEEVGDGTTTVIILAGEILAQCAPYLIEKNIHPVIIIQALKKALTDALEVIKQVSKPVDVENDA 149 (590)
T ss_dssp CCCHHHHTHHHHTTTHHHHCSSCHHHHHHHHHHHHHHHHHHHHSCCCCHHHHHHHHHHHHHHHHHHHHHHCCTTTTCCTH
T ss_pred CCCHHHHHHHHHHHhhhhhhCCCccchHHHHHHHHhhhHHhhhhcCCCHHHHHHHHHHHHHHHHHHHHHHhhccccCCHH
Confidence 58999999999999999999999999999999999999999 999999999999999999999999999999987 478
Q ss_pred HHHHHHHHhcC------CchhHHHHHHHHHHHhCCCCc----------------ccc--cCCCccccceEEEEeeEEccc
Q 011794 78 DIKAVATISAG------NDDLIGTMIADAIDKVGPDGV----------------LSI--ESSSSFETTVEVEEGMEIDRG 133 (477)
Q Consensus 78 ~l~~va~ts~~------~~~~~a~lv~~av~~v~~~~~----------------I~i--~~g~~~~ds~~~i~G~~~~~~ 133 (477)
.|.++|+|+++ +++.|++++++|+.++++++. |++ .+|+++.|| ++++|++|+++
T Consensus 150 ~L~~vA~tslsSK~~~~~~~~i~~livdAv~~V~~~~~~~~~~~~~~~vDl~~~I~I~ki~Ggs~~ds-~lv~Gmvfdk~ 228 (590)
T 3p9d_C 150 AMKKLIQASIGTKYVIHWSEKMCELALDAVKTVRKDLGQTVEGEPNFEIDIKRYVRVEKIPGGDVLDS-RVLKGVLLNKD 228 (590)
T ss_dssp HHHHHHTTTSTTSTTGGGHHHHHHHHHHHHTTSTTCC-----------CCCSSSSCEEEESSCCGGGC-BCCSSEEECCC
T ss_pred HHHHHHHHHHhcccccccHHHHHHHHHHHHHHhcccccCccccccccccchhhceEEEEecCCCcccc-eeeeEEEEecc
Confidence 89999999874 478999999999999987642 333 479999998 99999999999
Q ss_pred ccCCCCccCccccchhccceeEEEecccc-------------CCHHhHHHH-----------HHHHHhcCCCEEEEeccc
Q 011794 134 YISPQFVTNPEKLIVEFENARVLVTDQKI-------------SAIKDIIPL-----------LEKTTQLRAPLLIIAEDV 189 (477)
Q Consensus 134 ~~~p~~~~~~~~~~~~~~~~~Ill~~~~i-------------~~~~~l~~~-----------l~~i~~~~~~lvi~~~~i 189 (477)
+.+| +|+++++||||+++|++| ++++++.++ ++++.+.|++|||++++|
T Consensus 229 ~~~~-------~m~~~~en~kIll~d~~Le~~K~e~~~~v~Is~~~~l~~il~~E~~~l~~~vekI~~~g~~vII~e~~I 301 (590)
T 3p9d_C 229 VVHP-------KMSRHIENPRVVLLDCPLEYKKGESQTNIEIEKEEDWNRILQIEEEQVQLMCEQILAVRPTLVITEKGV 301 (590)
T ss_dssp CSCT-------TSCSCEESCCEECCCCCCSCCCCTTTEECCBCSTTHHHHHHHHHHHHHHHHHHHHHTTCCSEECCSSCC
T ss_pred cCCC-------CCcceeeeeEEEEEcccccccccccCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEecCCc
Confidence 8876 478899999999999964 455565544 478899999999999999
Q ss_pred cHHHHHHHHHhhhcccceEEEeeCCCcchhhhHHHHHHHHHhCceEecCCCCCcccCCCccCCcc-ceEEE---EecccE
Q 011794 190 TGEALATLVVNKLRGILNVAAIKAPGFGERRKALLQDIAIVTGAEFQAGDLGLLIENTSVEQLGT-ARKVT---IRKDST 265 (477)
Q Consensus 190 ~~~al~~l~~n~~~~~~~v~av~~~~~~~~~~~~l~~ia~~tGa~~~~~~~~~~~~~~~~~~lG~-~~~v~---~~~~~~ 265 (477)
++.++++|.++++ ..|+++++.+|+|||++|||++++ ++++++.++||+ |+.|+ +++++|
T Consensus 302 ~d~Al~~L~k~~I-----------~av~~~~k~~le~ia~~TGa~iis-----~l~~~~~~~LG~~a~~v~~~~ig~d~~ 365 (590)
T 3p9d_C 302 SDLAQHYLLKGGC-----------SVLRRVKKSDNNRIARVTGATIVN-----RVEDLKESDVGTNCGLFKVEMIGDEYF 365 (590)
T ss_dssp CTHHHHHHHHTTC-----------CCCCCCCHHHHHHHHHHHTCCCCS-----CSTTCCTTSCBCCCSEEECCEETTEEC
T ss_pred CHHHHHHHHhccc-----------eeeccCCHHHHHHHHHHhCCceee-----cccCCCHHHhCCcCCEEEEEEEcCcEE
Confidence 9999999999874 347889999999999999999999 899999999999 99997 578899
Q ss_pred EEEeCCCChHH--------------------------HHHHHHHHHHHHhhccchhhHHHHHHHHHHhcCCeEEEEecCC
Q 011794 266 TIIADAASKDE--------------------------IQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAA 319 (477)
Q Consensus 266 ~~~~~~~~~~~--------------------------~~~~i~~l~~~l~~~~~~~~~~~l~~r~~~l~~~~~tI~v~G~ 319 (477)
+||++|+++.. +++|+++|+.+++.+.++|+++ +++|+|+++||+|||+
T Consensus 366 ~~i~g~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~i~~r~~~i~~~~~~~~~~~~~~-----~~~l~ggv~tI~lrg~ 440 (590)
T 3p9d_C 366 SFLDNCKEPGSGSGWSHPQFEKGSGKRRWKKNFIAVSAANRFKKISSSGALGSGHHHHH-----HHHGSGKACTIMLRGG 440 (590)
T ss_dssp EEECC--------------------------------------------------------------CCCSCCCEEEECS
T ss_pred EEEeCCCCccccccccccccccccchhhhhcchhhHHHHHHHHHHHHHHhccCCHHHHH-----HHhhcCCeeEEEEcCC
Confidence 99999998887 9999999999999999999866 4789999999999999
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHcC-CcCCCcHHHHHHHHhhhhhhccCCchhHHHHHHHHHHHHHHHHHHHHHHcCCC
Q 011794 320 TETELEDRKLRIEDAKNATFAAIEEG-IVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAGVE 398 (477)
Q Consensus 320 t~~~~~e~~~~~~dal~~~~~~l~~g-vvpGGGa~e~~~s~~L~~~~~~~~~~~~~~~i~~~a~AL~~ip~~L~~NaG~d 398 (477)
|+.+++|++|+++||++++|+++++| +|||||++|++++++|.+++.++++.+ ++++++|++||+.||++||+|||+|
T Consensus 441 te~~l~E~kr~i~DAl~a~r~av~~~~iVpGGGa~e~~~s~~L~~~~~~~~g~e-q~~i~~~a~ALe~ip~~La~NaG~d 519 (590)
T 3p9d_C 441 SKDILNEIDRNLQDAMAVARNVMLSPSLSPGGGATEMAVSVKLAEKAKQLEGIQ-QWPYQAVADAMECIPRTLIQNAGGD 519 (590)
T ss_dssp STTTHHHHHHHHHHHHHHHHHHHHCCCEECTTTHHHHHHHHHHHHHHHHSCSTT-HHHHHHHHHHTTHHHHHHHHTTCSC
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHhcCCEEeCccHHHHHHHHHHHHHhhcCChHH-HHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 99999999999999999999999996 999999999999999999987777765 7999999999999999999999999
Q ss_pred hHHHHHHHHc----cCCceeEEcCCCcccccccCCcccchHHHHHHHHHHHHHHHHHhchhhhhhcCCCC
Q 011794 399 GEVVVEKVKD----SEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAIVVEKPKP 464 (477)
Q Consensus 399 ~~~~l~~l~~----~~~~~G~d~~~g~i~d~~~~gI~dp~~vk~~al~~A~e~a~~lL~iD~iI~~~~~~ 464 (477)
+.+++++|++ +++++|||+.+|++.||++.|||||+.||+++|+.|+|+|++|||||++|..+|++
T Consensus 520 ~~~vv~~l~~~h~~~~~~~G~d~~~g~~~dm~~~gI~dp~~vk~~al~~A~e~a~~iL~id~ii~~~~~~ 589 (590)
T 3p9d_C 520 PIRLLSQLRAKHAQGNFTTGIDGDKGKIVDMVSYGIWEPEVIKQQSVKTAIESACLLLRVDDIVSGVRKQ 589 (590)
T ss_dssp HHHHHHHHHHHHTTSCTTCBCCTTSSSCBCTTTTTCCEEHHHHHHHHHHHHHHHHHTTSEEEEECCCC--
T ss_pred HHHHHHHHHHHHhcCCCCEeEeCCCCeEeehHHcCCeEcHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCC
Confidence 9999999988 35789999999999999999999999999999999999999999999999887754
No 6
>3ruv_A Chaperonin, CPN; double-ring, protein folding machinery, group II chaperonin, binding, chaperone; HET: ANP; 2.24A {Methanococcus maripaludis} PDB: 3rus_A* 3ruw_A* 3ruq_A* 3los_A 3kfb_A* 3izi_A 3izj_A 3izm_A 3izh_A 3kfe_A* 3iyf_A* 3kfk_A* 3izk_A 3izl_A 3j03_A 3izn_A 3j02_A
Probab=100.00 E-value=4.2e-87 Score=711.47 Aligned_cols=413 Identities=24% Similarity=0.352 Sum_probs=372.6
Q ss_pred CCChHHHHHHHHHHhhhhccCCCcchHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHhccccCC--CHHH
Q 011794 1 MENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIE--GRDD 78 (477)
Q Consensus 1 ~~hp~akll~~~a~~qd~~~GDGTTt~vvLa~~Ll~~~~~li~~gi~p~~I~~g~~~a~~~~~~~L~~~s~~~~--~~~~ 78 (477)
++||+|||++++|++||+++||||||+|||+++||+++.+++++|+||+.|++||+.|++.++++|+++++|++ +++.
T Consensus 70 v~hP~Akll~e~a~~qd~e~GDGTTtvvVLA~~Ll~~a~~ll~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~d~~~ 149 (543)
T 3ruv_A 70 VEHPAAKMLIEVAKTQEKEVGDGTTTAVVVAGELLRKAEELLDQNVHPTIVVKGYQAAAQKAQELLKTIACEVGAQDKEI 149 (543)
T ss_dssp CCCHHHHHHHHHHHHHHHHTSSCHHHHHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHHHCEECCTTCHHH
T ss_pred CcCHHHHHHHHHHHHHHhhhCCCcccHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHhhCCCCCCCHHH
Confidence 58999999999999999999999999999999999999999999999999999999999999999999999988 7999
Q ss_pred HHHHHHHhcCC------chhHHHHHHHHHHHhCCC-Cc-----cccc--CCCccccceEEEEeeEEcccccCCCCccCcc
Q 011794 79 IKAVATISAGN------DDLIGTMIADAIDKVGPD-GV-----LSIE--SSSSFETTVEVEEGMEIDRGYISPQFVTNPE 144 (477)
Q Consensus 79 l~~va~ts~~~------~~~~a~lv~~av~~v~~~-~~-----I~i~--~g~~~~ds~~~i~G~~~~~~~~~p~~~~~~~ 144 (477)
|.++|+||+++ +++|++++++|+.+++++ |. |+++ .|+++.|| ++++|++|+++|.||+|
T Consensus 150 L~~va~tsl~sK~~~~~~~~i~~livdAv~~V~~~~g~~dl~~I~V~k~~Gg~~~ds-~lv~G~v~dk~~~~~~m----- 223 (543)
T 3ruv_A 150 LTKIAMTSITGKGAEKAKEKLAEIIVEAVSAVVDDEGKVDKDLIKIEKKSGASIDDT-ELIKGVLVDKERVSAQM----- 223 (543)
T ss_dssp HHHHHHHHHHHTCGGGCCHHHHHHHHHHHHHHCCTTSCCCGGGEEEEEEECSCGGGC-EEESSEEESCCCSCTTS-----
T ss_pred HHHHHHHHhcccccchhHHHHHHHHHHHHHHhhccCCCcccceEEEEEcCCCCcccc-eeecceEEeccccCccc-----
Confidence 99999999863 799999999999999987 65 5553 78999998 99999999999999974
Q ss_pred ccchhccceeEEEeccc-------------cCCHHh-----------HHHHHHHHHhcCCCEEEEeccccHHHHHHHHHh
Q 011794 145 KLIVEFENARVLVTDQK-------------ISAIKD-----------IIPLLEKTTQLRAPLLIIAEDVTGEALATLVVN 200 (477)
Q Consensus 145 ~~~~~~~~~~Ill~~~~-------------i~~~~~-----------l~~~l~~i~~~~~~lvi~~~~i~~~al~~l~~n 200 (477)
+++++||||+++|++ |+++++ +.++++++.++|+||||++++|+++++++|.++
T Consensus 224 --~~~~~n~kIll~~~~Le~~k~e~~~~v~Iss~~~l~~~~~~E~~~l~~~ve~I~~~g~~vvi~~~~I~~~al~~L~~~ 301 (543)
T 3ruv_A 224 --PKKVTDAKIALLNCAIEIKETETDAEIRITDPAKLMEFIEQEEKMLKDMVAEIKASGANVLFCQKGIDDLAQHYLAKE 301 (543)
T ss_dssp --CSEEEEEEEEEESSCBSCCCCSSCCCEEECSTTHHHHHHHHHHHHHHHHHHHHHHHTCSEEEESSCBCHHHHHHHHHT
T ss_pred --cccccCcEEEEEcccccccccccCceeEeCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCEEEEeCCccHHHHHHHHHc
Confidence 678999999999995 455555 567789999999999999999999999999987
Q ss_pred hhcccceEEEeeCCCcchhhhHHHHHHHHHhCceEecCCCCCcccCCCccCCccceEEEEe---cccEEEEeCCCChHHH
Q 011794 201 KLRGILNVAAIKAPGFGERRKALLQDIAIVTGAEFQAGDLGLLIENTSVEQLGTARKVTIR---KDSTTIIADAASKDEI 277 (477)
Q Consensus 201 ~~~~~~~v~av~~~~~~~~~~~~l~~ia~~tGa~~~~~~~~~~~~~~~~~~lG~~~~v~~~---~~~~~~~~~~~~~~~~ 277 (477)
+ |++| +++++++|+|||++|||++++ +++++++++||+|+.|++. +++++||++|+++
T Consensus 302 g------I~~v-----~~v~k~~le~ia~~tGa~iis-----~l~~l~~~~LG~a~~v~~~~ig~~~~~~i~g~~~~--- 362 (543)
T 3ruv_A 302 G------IVAA-----RRVKKSDMEKLAKATGANVIA-----AIAALSAQDLGDAGLVEERKISGDSMIFVEECKHP--- 362 (543)
T ss_dssp T------CEEE-----CSCCHHHHHHHHHHHCCCEES-----CGGGCCGGGCEEEEEEEEEEETTEEEEEEECCSSC---
T ss_pred C------cEEE-----eeCCHHHHHHHHHHhCCceec-----ccccCCHHHCCcccEEEEEEeCCceEEEEECCCCC---
Confidence 6 3554 467899999999999999999 8999999999999999864 8899999999864
Q ss_pred HHHHHHHHHHHhhccchhhHHHHHHHHHHhcCCeEEEEecCCCHHHHHHHHHHHHHHHHHHHHHHHcC-CcCCCcHHHHH
Q 011794 278 QARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEG-IVPGGGAALVH 356 (477)
Q Consensus 278 ~~~i~~l~~~l~~~~~~~~~~~l~~r~~~l~~~~~tI~v~G~t~~~~~e~~~~~~dal~~~~~~l~~g-vvpGGGa~e~~ 356 (477)
..+||+|||+|+.+++|++|+++||++++|+++++| +|||||++|++
T Consensus 363 --------------------------------~~~TI~lrG~te~~l~E~kr~l~DAl~~~r~av~~g~iVpGGGa~e~~ 410 (543)
T 3ruv_A 363 --------------------------------KAVTMLIRGTTEHVIEEVARAVDDAVGVVGCTIEDGRIVSGGGSTEVE 410 (543)
T ss_dssp --------------------------------SSEEEEEEESSHHHHHHHHHHHHHHHHHHHHHHHHCEEEETTTHHHHH
T ss_pred --------------------------------ceeEEEecCCCHHHHHHHHHHHHHHHHHHHHHHhcCCeecCCcHHHHH
Confidence 469999999999999999999999999999999999 99999999999
Q ss_pred HHHhhhhhhccCCchhHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHcc-----CCceeEEcCCCcccccccCCcc
Q 011794 357 LSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAGVEGEVVVEKVKDS-----EWTTGYNAMTDKYENMLQAGVI 431 (477)
Q Consensus 357 ~s~~L~~~~~~~~~~~~~~~i~~~a~AL~~ip~~L~~NaG~d~~~~l~~l~~~-----~~~~G~d~~~g~i~d~~~~gI~ 431 (477)
|+++|++++.++++.+ |+++++|++||+.||++|++|||+|+.+++++|++. ++++|||+.+|++.||++.|||
T Consensus 411 ~s~~L~~~~~~~~g~e-q~~i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~~G~d~~~g~~~dm~~~gI~ 489 (543)
T 3ruv_A 411 LSMKLREYAEGISGRE-QLAVRAFADALEVIPRTLAENAGLDAIEILVKVRAAHASNGNKCAGLNVFTGAVEDMCENGVV 489 (543)
T ss_dssp HHHHHHHHHHTCCTTH-HHHHHHHHHHHTHHHHHHHHHTTCCHHHHHHHHHHHHTTTCCTTEEECTTTCSEEETTTTTCE
T ss_pred HHHHHHHHhhcCChHH-HHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHhhcCCceeeeeCCCCccccHHHcCCE
Confidence 9999999998878865 799999999999999999999999999999999873 3689999999999999999999
Q ss_pred cchHHHHHHHHHHHHHHHHHhchhhhhhcCCCCCCCCCCCCC
Q 011794 432 DPAKVTRCALQNAASVAGMVLTTQAIVVEKPKPKTPVAAPPQ 473 (477)
Q Consensus 432 dp~~vk~~al~~A~e~a~~lL~iD~iI~~~~~~~~~~~~~~~ 473 (477)
||+.||+++|+.|+|+|++|||||++|..+|++.++++++||
T Consensus 490 dp~~vk~~al~~A~~~a~~iL~id~ii~~~~~~~~~~~~~~~ 531 (543)
T 3ruv_A 490 EPLRVKTQAIQSAAESTEMLLRIDDVIAAEKLRGAPDMGDMG 531 (543)
T ss_dssp EEHHHHHHHHHHHHHHHHHHHTCCEEEEEC------------
T ss_pred ecHHHHHHHHHHHHHHHHHHHhHHhheecCccCCCCCCCCCC
Confidence 999999999999999999999999999999887654434343
No 7
>3ko1_A Chaperonin; 9-fold symmetry, double ring, ATP hydrolase, chaperone, NUCL binding; HET: ADP; 3.70A {Acidianus tengchongensis}
Probab=100.00 E-value=1.3e-86 Score=707.73 Aligned_cols=406 Identities=21% Similarity=0.329 Sum_probs=372.2
Q ss_pred CCChHHHHHHHHHHhhhhccCCCcchHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHhccccCC--CHHH
Q 011794 1 MENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIE--GRDD 78 (477)
Q Consensus 1 ~~hp~akll~~~a~~qd~~~GDGTTt~vvLa~~Ll~~~~~li~~gi~p~~I~~g~~~a~~~~~~~L~~~s~~~~--~~~~ 78 (477)
++||+|||++++|++||+++||||||+|||+++||+++.+++++|+||+.|++||++|++.++++|++++++++ +++.
T Consensus 81 v~hP~Akll~e~a~~qd~e~GDGTTtvvVLA~eLL~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~d~e~ 160 (553)
T 3ko1_A 81 LQHPAAKLLVQIAKGQDEETADGTKTAVIFSGELVKKAEDLLYKDVHPTIIISGYKKAEEVALQTIQELAQTVSINDTDL 160 (553)
T ss_dssp CCSHHHHHHHHHHHTCSSSSSTTHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTCEECCTTCHHH
T ss_pred ccChhHHHHHHHhhCCcccccCCceeEEEehHHHHHhHHHHHhcCCCceEEehhhhHHHHHHHHHHHHhcCCCCCCcHHH
Confidence 58999999999999999999999999999999999999999999999999999999999999999999999987 8899
Q ss_pred HHHHHHHhcCC------chhHHHHHHHHHHHhCCC--Cc-------ccc--cCCCccccceEEEEeeEEcccccCCCCcc
Q 011794 79 IKAVATISAGN------DDLIGTMIADAIDKVGPD--GV-------LSI--ESSSSFETTVEVEEGMEIDRGYISPQFVT 141 (477)
Q Consensus 79 l~~va~ts~~~------~~~~a~lv~~av~~v~~~--~~-------I~i--~~g~~~~ds~~~i~G~~~~~~~~~p~~~~ 141 (477)
|.++|+||+++ +++|++++++|+.+++++ |. |++ .+|+++.|| ++++|++|+++|.||+|
T Consensus 161 L~~vA~tsl~sK~~~~~~~~i~~livdAv~~V~~~~~G~~~~dl~~I~I~k~~Gg~~~ds-~lv~G~v~dk~~~~~~m-- 237 (553)
T 3ko1_A 161 LRKIAMTSLSSKAVAGAREYIADIVVKAVTQVAELRGDKWYVDLDNIQIVKKAGGSINDT-QLVYGIVVDKEVVHPGM-- 237 (553)
T ss_dssp HHHHHHHHHTTSSCCTTHHHHHHHHHHHHHHHCCCTTSSCCCCGGGEEEEECCCSCGGGC-EEESEEEECSCBSCTTS--
T ss_pred HHHHHHHHhhHHhhhhHHHHHHHHHHHHHHHHHHhcCCceEEechhHHHHHHhCCccccc-eeeEEEEecccccCCCC--
Confidence 99999999875 789999999999999875 65 655 378899998 99999999999999974
Q ss_pred CccccchhccceeEEEeccc-------------cCCHHh-----------HHHHHHHHHhcCCCEEEEeccccHHHHHHH
Q 011794 142 NPEKLIVEFENARVLVTDQK-------------ISAIKD-----------IIPLLEKTTQLRAPLLIIAEDVTGEALATL 197 (477)
Q Consensus 142 ~~~~~~~~~~~~~Ill~~~~-------------i~~~~~-----------l~~~l~~i~~~~~~lvi~~~~i~~~al~~l 197 (477)
+++++||||+++|++ ++++++ +.++++++.++|+||||++++|++.++++|
T Consensus 238 -----~~~ien~kIll~d~~Le~~k~e~~~~v~Iss~~~l~~~~~~E~~~l~~~vekI~~~g~~vvI~~~~I~~~al~~L 312 (553)
T 3ko1_A 238 -----PKRLENAKIALIDASLEVEKPELDAEIRINDPTQMQKFLDEEENLIKEKVDKILATGANVIICQKGIDEVAQSYL 312 (553)
T ss_dssp -----CSCCBSCEEEEECSCBSCCCCTTTCCCCCCSHHHHHHHHHHHHHHHHHHHHHHHTTCCSEEECSSCBCSHHHHHH
T ss_pred -----ccccccceEEEecCcccccCcccCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhhcceEEEeccChHHHHHHHH
Confidence 678999999999995 566666 457789999999999999999999999999
Q ss_pred HHhhhcccceEEEeeCCCcchhhhHHHHHHHHHhCceEecCCCCCcccCCCccCCccceEEEEe---cccEEEEeCCCCh
Q 011794 198 VVNKLRGILNVAAIKAPGFGERRKALLQDIAIVTGAEFQAGDLGLLIENTSVEQLGTARKVTIR---KDSTTIIADAASK 274 (477)
Q Consensus 198 ~~n~~~~~~~v~av~~~~~~~~~~~~l~~ia~~tGa~~~~~~~~~~~~~~~~~~lG~~~~v~~~---~~~~~~~~~~~~~ 274 (477)
.++++ ++| +++++++|+|||++|||++++ +++++++++||+|+.|++. +++|+||++|+++
T Consensus 313 ~~~gI------~~v-----~~v~k~~leria~~tGa~ivs-----~l~~l~~~~LG~a~~v~~~~ig~d~~~~i~g~~~~ 376 (553)
T 3ko1_A 313 AKKGV------LAV-----RRAKKSDLEKLARATGGRVVS-----NIDEISEQDLGYASLIEERKVGEDKMVFVEGAKNP 376 (553)
T ss_dssp HHHTC------EEE-----CCCCHHHHHHHHTTTTCCEES-----CGGGCCSSSSEECSEEECCCCSSSCCEEEESCSSS
T ss_pred Hhcch------hhh-----hhhhhhhHHHHHHhhCCeeec-----ccccCChhhcchHHHHHHhhcCcceEEEeccCCCC
Confidence 98763 554 467899999999999999999 8999999999999999964 8899999999864
Q ss_pred HHHHHHHHHHHHHHhhccchhhHHHHHHHHHHhcCCeEEEEecCCCHHHHHHHHHHHHHHHHHHHHHHHcC-CcCCCcHH
Q 011794 275 DEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEG-IVPGGGAA 353 (477)
Q Consensus 275 ~~~~~~i~~l~~~l~~~~~~~~~~~l~~r~~~l~~~~~tI~v~G~t~~~~~e~~~~~~dal~~~~~~l~~g-vvpGGGa~ 353 (477)
..+||+|||+|+.+++|++|+++||++++|+++++| +|||||++
T Consensus 377 -----------------------------------~~~TI~lrG~te~~l~E~er~l~DAl~~~r~av~~g~iVpGGGa~ 421 (553)
T 3ko1_A 377 -----------------------------------KSISILIRGGLERLVDETERALRDALGTVADVIKDGRAIAGGGAV 421 (553)
T ss_dssp -----------------------------------SCEEEEECCSSTTHHHHHHHHHHHHHHHHHHHHHHCEEEETTTHH
T ss_pred -----------------------------------ceEEEeeeccHHHHHHHHHHHHHHHHHHHHHHhhcCceecCCcee
Confidence 479999999999999999999999999999999999 99999999
Q ss_pred HHHHHHhhhhhhccCCchhHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHccC-----CceeEEcCCCcccccccC
Q 011794 354 LVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAGVEGEVVVEKVKDSE-----WTTGYNAMTDKYENMLQA 428 (477)
Q Consensus 354 e~~~s~~L~~~~~~~~~~~~~~~i~~~a~AL~~ip~~L~~NaG~d~~~~l~~l~~~~-----~~~G~d~~~g~i~d~~~~ 428 (477)
|++|+++|++++.++++.+ |+++++|++||+.||++|++|||+|+.+++.+|++.+ +++|||+.+|++.||++.
T Consensus 422 e~~~s~~L~~~~~~~~g~e-q~~i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~~G~d~~~g~~~d~~~~ 500 (553)
T 3ko1_A 422 EIEIAKKLRKYAPQVGGKE-QLAVEAYANALESLVSILIENAGFDPIDLLMKLRSTHENENNKWYGIDLYAGQPVDMWQK 500 (553)
T ss_dssp HHHHHHHHHHHHHHHCSHH-HHHHHHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHTTCSGGGTTEEEETTTTEEEESGGG
T ss_pred EeHHHHHHHHhccccCChh-HhHHHHHHHHHHhHHHHHHHhcCCCHHHHHHHHHHHhhCcCCceEeEEeecCCchHHHHh
Confidence 9999999999987777865 7999999999999999999999999999999999842 689999999999999999
Q ss_pred CcccchHHHHHHHHHHHHHHHHHhchhhhhhcCCCCCC
Q 011794 429 GVIDPAKVTRCALQNAASVAGMVLTTQAIVVEKPKPKT 466 (477)
Q Consensus 429 gI~dp~~vk~~al~~A~e~a~~lL~iD~iI~~~~~~~~ 466 (477)
|||||+.||+++|+.|+|+|++|||||++|..+|++++
T Consensus 501 gI~dp~~vk~~al~~A~e~a~~iL~iD~ii~~~~~~~~ 538 (553)
T 3ko1_A 501 GVIEPALVKMNAIKAATEAATLVLRIDDVVSAGKKSGG 538 (553)
T ss_dssp SCEEETTHHHHHHHHHHHHHHHHHHEEEECCC------
T ss_pred CccchhhhhhhhhhhcchhheEEEehHHHHHhhhhccC
Confidence 99999999999999999999999999999998887654
No 8
>1a6d_B Thermosome (beta subunit); group II chaperonin, CCT, TRIC, PR folding, ATPase, chaperonin; 2.60A {Thermoplasma acidophilum} SCOP: a.129.1.2 c.8.5.2 d.56.1.2 PDB: 1a6e_B* 1e0r_B
Probab=100.00 E-value=4.1e-86 Score=704.50 Aligned_cols=413 Identities=21% Similarity=0.329 Sum_probs=372.1
Q ss_pred CCChHHHHHHHHHHhhhhccCCCcchHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHhccccCCC--HHH
Q 011794 1 MENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEG--RDD 78 (477)
Q Consensus 1 ~~hp~akll~~~a~~qd~~~GDGTTt~vvLa~~Ll~~~~~li~~gi~p~~I~~g~~~a~~~~~~~L~~~s~~~~~--~~~ 78 (477)
++||+|||++++|++||+++||||||+|+||++||+++.+++++|+||+.|++||++|++.++++|+++++|++. ++.
T Consensus 72 v~hP~Akll~e~a~~qd~e~GDGTTtvvvLA~~LL~~a~~ll~~GihP~~I~~G~~~A~~~a~~~L~~~a~~v~~~~~~~ 151 (543)
T 1a6d_B 72 VEHPAAKMMVEVSKTQDSFVGDGTTTAVIIAGGLLQQAQGLINQNVHPTVISEGYRMASEEAKRVIDEISTKIGADEKAL 151 (543)
T ss_dssp CCSHHHHHHHHHHTCTTCCCTTHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHHCEECCTTHHHH
T ss_pred ccchHHHHHHHHHHhcCCEECCChhHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCHHH
Confidence 589999999999999999999999999999999999999999999999999999999999999999999999874 789
Q ss_pred HHHHHHHhcC------CchhHHHHHHHHHHHhCCC--Cc-------cccc--CCCccccceEEEEeeEEcccccCCCCcc
Q 011794 79 IKAVATISAG------NDDLIGTMIADAIDKVGPD--GV-------LSIE--SSSSFETTVEVEEGMEIDRGYISPQFVT 141 (477)
Q Consensus 79 l~~va~ts~~------~~~~~a~lv~~av~~v~~~--~~-------I~i~--~g~~~~ds~~~i~G~~~~~~~~~p~~~~ 141 (477)
|.++|+|+++ +++.|++++++|+.+++++ |. |+++ +|++++|| ++++|++|+++|.||+|
T Consensus 152 l~~va~tsl~sKi~~~~~~~i~~livdAv~~v~~~~~g~~~~d~~~I~V~k~~G~~~~ds-~lv~G~v~dk~~~~~~m-- 228 (543)
T 1a6d_B 152 LLKMAQTSLNSKSASVAKDKLAEISYEAVKSVAELRDGKYYVDFDNIQVVKKQGGAIDDT-QLINGIIVDKEKVHPGM-- 228 (543)
T ss_dssp HHHHHHHHHTTSGGGGGHHHHHHHHHHHHHHHEEECSSSEEECGGGEEEEEEESSCGGGC-EEESEEEESCCCSSTTS--
T ss_pred HHHHHHHHhccccccccHHHHHHHHHHHHHHhcccccCCcccccceEEEEEecCCCccce-eEEccEEEecCCCCCCC--
Confidence 9999998864 4689999999999999876 52 6664 99999999 99999999999999975
Q ss_pred CccccchhccceeEEEeccc-------------cCCHHhH-----------HHHHHHHHhcCCCEEEEeccccHHHHHHH
Q 011794 142 NPEKLIVEFENARVLVTDQK-------------ISAIKDI-----------IPLLEKTTQLRAPLLIIAEDVTGEALATL 197 (477)
Q Consensus 142 ~~~~~~~~~~~~~Ill~~~~-------------i~~~~~l-----------~~~l~~i~~~~~~lvi~~~~i~~~al~~l 197 (477)
+++++||||+++|++ +++++++ .++++++.++|+||||++++|+++++++|
T Consensus 229 -----~~~ien~kIll~~~~Le~~k~e~~~~v~i~~~~~l~~~~~~E~~~l~~~le~I~~~g~~lvi~~~~I~~~al~~L 303 (543)
T 1a6d_B 229 -----PDVVKDAKIALLDAPLEIKKPEFDTNLRIEDPSMIQKFLAQEENMLREMVDKIKSVGANVVITQKGIDDMAQHYL 303 (543)
T ss_dssp -----CSEEEEEEEEEESSCBSCCCCSSEEEECCCSTTHHHHHHHHHHHHHHHHHHHHHHTTCCEEEESSCBCHHHHHHH
T ss_pred -----cceecCCeEEEEecccccccccCCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCEEEECCCcCHHHHHHH
Confidence 567899999999998 6677665 78899999999999999999999999999
Q ss_pred HHhhhcccceEEEeeCCCcchhhhHHHHHHHHHhCceEecCCCCCcccCCCccCCccceEEEEe---cccEEEEeCCCCh
Q 011794 198 VVNKLRGILNVAAIKAPGFGERRKALLQDIAIVTGAEFQAGDLGLLIENTSVEQLGTARKVTIR---KDSTTIIADAASK 274 (477)
Q Consensus 198 ~~n~~~~~~~v~av~~~~~~~~~~~~l~~ia~~tGa~~~~~~~~~~~~~~~~~~lG~~~~v~~~---~~~~~~~~~~~~~ 274 (477)
++++ |+|| +++++++|+|||++|||++++ +++++++++||+|+.|++. +++|+||++|++
T Consensus 304 ~~~~------I~av-----~~v~k~~le~ia~~tGa~iis-----~l~~l~~~~LG~a~~v~~~~ig~~~~~~~~g~~~- 366 (543)
T 1a6d_B 304 SRAG------IYAV-----RRVKKSDMDKLAKATGASIVS-----TIDEISSSDLGTAERVEQVKVGEDYMTFVTGCKN- 366 (543)
T ss_dssp HHTT------CEEE-----CSCCHHHHHHHHHHHTCCEES-----CGGGCCGGGCEEEEEEEEEEETTEEEEEEEEESS-
T ss_pred HHCC------eeEe-----ccCCHHHHHHHHHHhCCceec-----ccccCCHHHCCCceEEEEEEecCceEEEEecCCC-
Confidence 9987 4665 577899999999999999999 8999999999999999864 889999999876
Q ss_pred HHHHHHHHHHHHHHhhccchhhHHHHHHHHHHhcCCeEEEEecCCCHHHHHHHHHHHHHHHHHHHHHHHcC-CcCCCcHH
Q 011794 275 DEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEG-IVPGGGAA 353 (477)
Q Consensus 275 ~~~~~~i~~l~~~l~~~~~~~~~~~l~~r~~~l~~~~~tI~v~G~t~~~~~e~~~~~~dal~~~~~~l~~g-vvpGGGa~ 353 (477)
++.|||+|||+|+.+++|++|+++||++++|+++++| +|||||++
T Consensus 367 ----------------------------------~~~~TI~lrG~t~~~l~E~er~l~DAl~~~r~a~~~~~ivpGGGa~ 412 (543)
T 1a6d_B 367 ----------------------------------PKAVSILVRGETEHVVDEMERSITDSLHVVASALEDGAYAAGGGAT 412 (543)
T ss_dssp ----------------------------------SSCEEEEEEESSHHHHHHHHHHHHHHHHHHHHHHHHCEEEETTTHH
T ss_pred ----------------------------------CceEEEEecCCCHHHHHHHHHHHHHHHHHHHHHHHCCCccCCccHH
Confidence 3689999999999999999999999999999999999 99999999
Q ss_pred HHHHHHhhhhhhccCCchhHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHcc----CCceeEEcCCCcccccccCC
Q 011794 354 LVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAGVEGEVVVEKVKDS----EWTTGYNAMTDKYENMLQAG 429 (477)
Q Consensus 354 e~~~s~~L~~~~~~~~~~~~~~~i~~~a~AL~~ip~~L~~NaG~d~~~~l~~l~~~----~~~~G~d~~~g~i~d~~~~g 429 (477)
|++|+++|++++.+.++.+ ++++++|++||+.||++|++|||+|+.+++++|++. +.++|||+.+|++.||++.|
T Consensus 413 e~~~s~~L~~~~~~~~g~~-q~~i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~G~d~~~g~~~d~~~~g 491 (543)
T 1a6d_B 413 AAEIAFRLRSYAQKIGGRQ-QLAIEKFADAIEEIPRALAENAGLDPIDILLKLRAEHAKGNKTYGINVFTGEIEDMVKNG 491 (543)
T ss_dssp HHHHHHHHHHHHHHTCSSH-HHHHHHHHHHHTHHHHHHHHHHTCCHHHHHHHHHHHHHTTCTTEEEETTTTEEEETTTTT
T ss_pred HHHHHHHHHHHhhhcCChH-HHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHhCCCCCeeEeCCCCcccchhhcC
Confidence 9999999999987777765 799999999999999999999999999999999963 46899999999999999999
Q ss_pred cccchHHHHHHHHHHHHHHHHHhchhhhhhcCCCCCCCCCCCCC
Q 011794 430 VIDPAKVTRCALQNAASVAGMVLTTQAIVVEKPKPKTPVAAPPQ 473 (477)
Q Consensus 430 I~dp~~vk~~al~~A~e~a~~lL~iD~iI~~~~~~~~~~~~~~~ 473 (477)
||||+.+|+++|+.|+|+|++|||||++|..+|++.+++|+++|
T Consensus 492 I~dp~~vk~~al~~A~e~a~~iL~id~iI~~~~~~~~~~~~~~~ 535 (543)
T 1a6d_B 492 VIEPIRVGKQAIESATEAAIMILRIDDVIATKSSSSSSNPPKSG 535 (543)
T ss_dssp CEEEHHHHHHHHHHHHHHHHHHHHEEEEEC--------------
T ss_pred ceecHHHHHHHHHHHHHHHHHHHHHHHHHhcCccCCCCCCCCCC
Confidence 99999999999999999999999999999998876554444443
No 9
>3aq1_B Thermosome subunit; group II chaperonin, protein folding, chaperone; 2.75A {Methanococcoides burtonii}
Probab=100.00 E-value=3.2e-86 Score=698.87 Aligned_cols=406 Identities=21% Similarity=0.318 Sum_probs=344.2
Q ss_pred CCChHHHHHHHHHHhhhhccCCCcchHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHhccccCC--CHHH
Q 011794 1 MENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIE--GRDD 78 (477)
Q Consensus 1 ~~hp~akll~~~a~~qd~~~GDGTTt~vvLa~~Ll~~~~~li~~gi~p~~I~~g~~~a~~~~~~~L~~~s~~~~--~~~~ 78 (477)
++||+|||++++|++||+++||||||+|+||++||+++.+++++|+||+.|++||+.|++.++++|+++++|++ +++.
T Consensus 24 v~hP~Akll~e~a~~qd~e~GDGTTtvvvLa~~LL~~a~~ll~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~d~~~ 103 (500)
T 3aq1_B 24 IQHPAAKMIVEVSKTQDAEVGDGTTTAAVLSGELLSKAEELIMKGVHSTIISEGYRHAAEKCREILETITIAISPDDEAA 103 (500)
T ss_dssp -------------------CCHHHHHHHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHHHCEECCTTCHHH
T ss_pred CCCHHHHHHHHHHHhhhhhhCCChHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcHHH
Confidence 58999999999999999999999999999999999999999999999999999999999999999999999987 5889
Q ss_pred HHHHHHHhcC------CchhHHHHHHHHHHHhCCC--Cc--------cccc--CCCccccceEEEEeeEEcccccCCCCc
Q 011794 79 IKAVATISAG------NDDLIGTMIADAIDKVGPD--GV--------LSIE--SSSSFETTVEVEEGMEIDRGYISPQFV 140 (477)
Q Consensus 79 l~~va~ts~~------~~~~~a~lv~~av~~v~~~--~~--------I~i~--~g~~~~ds~~~i~G~~~~~~~~~p~~~ 140 (477)
|.++|+|+++ +++.|++++++|+.+++++ |. |+++ +|+++.|| ++++|++|+++|.||+|
T Consensus 104 l~~va~tsl~sKi~~~~~~~i~~li~dAv~~v~~~~~g~~~~di~~~I~V~k~~G~~~~ds-~lv~G~v~dk~~~~~~m- 181 (500)
T 3aq1_B 104 LIKIAGTAITGKGAEAYKEKLSALTVKAVRSIVEEEEDGLKVNVLENIKIEKRAGGSIDDS-ELIDGLVIDKERSHPNM- 181 (500)
T ss_dssp HHHHHHTTCCSSSTTSSHHHHHHHHHHHHTTSEECCSSSCEECHHHHEEEEEEESSCGGGC-EEESEEEESCCCSSTTS-
T ss_pred HHHHHHHHhhcccccccHHHHHHHHHHHHHHhcccccCCccccccccEEEEEecCCCccce-EEEeeeEEeecCCCCCC-
Confidence 9999998854 5799999999999999865 43 4554 89999998 99999999999999975
Q ss_pred cCccccchhccceeEEEeccc-------------cCCHHhH-----------HHHHHHHHhcCCCEEEEeccccHHHHHH
Q 011794 141 TNPEKLIVEFENARVLVTDQK-------------ISAIKDI-----------IPLLEKTTQLRAPLLIIAEDVTGEALAT 196 (477)
Q Consensus 141 ~~~~~~~~~~~~~~Ill~~~~-------------i~~~~~l-----------~~~l~~i~~~~~~lvi~~~~i~~~al~~ 196 (477)
+++++||||+++|++ +++++++ .++++++.++|+||||++++|+++++++
T Consensus 182 ------~~~i~n~kIll~~~~Le~~k~e~~~~v~i~~~~~l~~~~~~E~~~l~~~le~I~~~g~~lvi~~~~I~~~al~~ 255 (500)
T 3aq1_B 182 ------PEKVENAKILLLSCPVEFRKTEVDSEIKITSPGQMQLFLDQEEKMMREMAEKVIASGANVVFCQKGIDDMAQYY 255 (500)
T ss_dssp ------CSEEEEEEEEEESSCBCC-------------------------CHHHHHHHHHHTTCCSEEEESSCBCHHHHHH
T ss_pred ------cccccCCEEEEEeCCccccccccceeEeeCCHHHHHHHHHHHHHHHHHHHHHHHHhCcCEEEECCCcCHHHHHH
Confidence 578999999999998 5666665 7899999999999999999999999999
Q ss_pred HHHhhhcccceEEEeeCCCcchhhhHHHHHHHHHhCceEecCCCCCcccCCCccCCccceEEEEe---cccEEEEeCCCC
Q 011794 197 LVVNKLRGILNVAAIKAPGFGERRKALLQDIAIVTGAEFQAGDLGLLIENTSVEQLGTARKVTIR---KDSTTIIADAAS 273 (477)
Q Consensus 197 l~~n~~~~~~~v~av~~~~~~~~~~~~l~~ia~~tGa~~~~~~~~~~~~~~~~~~lG~~~~v~~~---~~~~~~~~~~~~ 273 (477)
|++++ |+|| +++++++|+|||++|||++++ +++++++++||+|+.|++. +++|+||++|++
T Consensus 256 L~~~~------I~av-----~~~~k~~le~ia~~tGa~iis-----~l~~~~~~~LG~a~~v~~~~ig~~~~~~~~g~~~ 319 (500)
T 3aq1_B 256 IEKAG------IYAV-----RRVKKSDLKRLSKVTGATIIQ-----DLDQITTEDVGTAGLVEEKEVRGGKMTYVTGCQN 319 (500)
T ss_dssp HHHTT------CEEE-----CSCCHHHHHHHHHHHCCCCBS-----CTTCCCSTTCEEEEEEEEEECSSSEEEEEEEETT
T ss_pred HHHCC------EEEE-----EeCCHHHHHHHHHHhCCeEec-----ccccCCHhHCCCceEEEEEEecCeEEEEEECCCC
Confidence 99987 4665 577899999999999999999 8999999999999999974 889999999875
Q ss_pred hHHHHHHHHHHHHHHhhccchhhHHHHHHHHHHhcCCeEEEEecCCCHHHHHHHHHHHHHHHHHHHHHHHcC-CcCCCcH
Q 011794 274 KDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEG-IVPGGGA 352 (477)
Q Consensus 274 ~~~~~~~i~~l~~~l~~~~~~~~~~~l~~r~~~l~~~~~tI~v~G~t~~~~~e~~~~~~dal~~~~~~l~~g-vvpGGGa 352 (477)
++.|||+|||+|+.+++|++|+++||++++|+++++| +|||||+
T Consensus 320 -----------------------------------~~~~TI~lrG~t~~~l~E~er~l~Dal~~~r~~~~~~~iVpGGGa 364 (500)
T 3aq1_B 320 -----------------------------------SKAVTVLLHGGTEHVVDSLDHALNDALHVVGVVIEDGKVVVGGGS 364 (500)
T ss_dssp -----------------------------------CCCEEEEEEESSHHHHHHHHHHHHHHHHHHHHHHHHSEEEETTTH
T ss_pred -----------------------------------CceEEEEecCCcHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCcH
Confidence 3689999999999999999999999999999999999 9999999
Q ss_pred HHHHHHHhhhhhhccCCchhHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHcc----CCceeEEcCCCcccccccC
Q 011794 353 ALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAGVEGEVVVEKVKDS----EWTTGYNAMTDKYENMLQA 428 (477)
Q Consensus 353 ~e~~~s~~L~~~~~~~~~~~~~~~i~~~a~AL~~ip~~L~~NaG~d~~~~l~~l~~~----~~~~G~d~~~g~i~d~~~~ 428 (477)
+|++++++|++++.+.++.+ ++++++|++||+.||++|++|||+|+.+++++|++. +.++|||+.+|++.||++.
T Consensus 365 ~e~~~~~~L~~~~~~~~g~~-q~~i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~G~d~~~g~~~d~~~~ 443 (500)
T 3aq1_B 365 SEVELSLRLSEYASTLKGRE-QLAVSKFAEALEVIPVALAENAGLDPIDIMVELRSQHEKGNKNAGLNVYTGEVVDMWEN 443 (500)
T ss_dssp HHHHHHHHHHHHHHTCCSHH-HHHHHHHHHHTTHHHHHHHHHTTCCHHHHHHHHHHHHHTTCTTEEECTTTCCEEETTTT
T ss_pred HHHHHHHHHHHHhhhcCchH-HHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHhcCCCCCeeEeCCCCCccchHhc
Confidence 99999999999998777865 799999999999999999999999999999999963 4589999999999999999
Q ss_pred CcccchHHHHHHHHHHHHHHHHHhchhhhhhcCCCCCC
Q 011794 429 GVIDPAKVTRCALQNAASVAGMVLTTQAIVVEKPKPKT 466 (477)
Q Consensus 429 gI~dp~~vk~~al~~A~e~a~~lL~iD~iI~~~~~~~~ 466 (477)
|||||+.+|+++|+.|+|+|++|||||++|..+|++++
T Consensus 444 gI~dp~~vk~~al~~A~e~a~~iL~iD~iI~~~~~~~~ 481 (500)
T 3aq1_B 444 DVIEPLRIKTQAINAAMEATVMILRIDDVVASKGSANQ 481 (500)
T ss_dssp TCEEEHHHHHHHHHHHHHHHHHHHCC------------
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCccCCC
Confidence 99999999999999999999999999999999887654
No 10
>1q3q_A Thermosome alpha subunit; chaperone, chaperonin; HET: ANP; 2.30A {Thermococcus SP} SCOP: a.129.1.2 c.8.5.2 d.56.1.2 PDB: 1q2v_A* 1q3s_A* 1q3r_A
Probab=100.00 E-value=8e-86 Score=702.37 Aligned_cols=406 Identities=22% Similarity=0.373 Sum_probs=375.2
Q ss_pred CCChHHHHHHHHHHhhhhccCCCcchHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHhccccCC--CHHH
Q 011794 1 MENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIE--GRDD 78 (477)
Q Consensus 1 ~~hp~akll~~~a~~qd~~~GDGTTt~vvLa~~Ll~~~~~li~~gi~p~~I~~g~~~a~~~~~~~L~~~s~~~~--~~~~ 78 (477)
++||+|||++++|++||+++||||||+|+|+++||+++.+++++|+||+.|++||+.|++.++++|+++++|++ +++.
T Consensus 74 v~hP~Akll~e~a~~qd~e~GDGTTtvvvLA~~LL~~a~~ll~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~d~~~ 153 (548)
T 1q3q_A 74 LQHPAAKMMVEVAKTQDKEAGDGTTTAVVIAGELLRKAEELLDQNIHPSIITKGYALAAEKAQEILDEIAIRVDPDDEET 153 (548)
T ss_dssp CCSHHHHHHHHHHHHHHHHTSSCHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHHCEECCTTCHHH
T ss_pred ccchHHHHHHHHHHhcCCEECCChhHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCHHH
Confidence 58999999999999999999999999999999999999999999999999999999999999999999999987 4889
Q ss_pred HHHHHHHhcC------CchhHHHHHHHHHHHhCCC--C-------ccccc--CCCccccceEEEEeeEEcccccCCCCcc
Q 011794 79 IKAVATISAG------NDDLIGTMIADAIDKVGPD--G-------VLSIE--SSSSFETTVEVEEGMEIDRGYISPQFVT 141 (477)
Q Consensus 79 l~~va~ts~~------~~~~~a~lv~~av~~v~~~--~-------~I~i~--~g~~~~ds~~~i~G~~~~~~~~~p~~~~ 141 (477)
|.++|+|+++ +++.|++++++|+.+++++ | +|+++ +|++++|| ++++|++|+++|.||+|
T Consensus 154 l~~va~tsl~sKi~~~~~~~i~~livdAv~~V~~~~~g~~~~d~~~I~V~k~~G~~~~ds-~lv~G~v~dk~~~~~~m-- 230 (548)
T 1q3q_A 154 LLKIAATSITGKNAESHKELLAKLAVEAVKQVAEKKDGKYVVDLDNIKFEKKAGEGVEES-ELVRGVVIDKEVVHPRM-- 230 (548)
T ss_dssp HHHHHHHHSCSSTTGGGHHHHHHHHHHHHHHHCEESSSSEECCGGGEEEEEEEBSCGGGC-EEESSEEESCCCSSTTS--
T ss_pred HHHHHHHHhhccccccchHHHHHHHHHHHHHhccccCCCccccCCeEEEEEecCCCccce-EEEeeEEEeccCCCCCC--
Confidence 9999999864 4689999999999999875 4 56665 99999999 99999999999999985
Q ss_pred CccccchhccceeEEEeccc-------------cCCHHhH-----------HHHHHHHHhcCCCEEEEeccccHHHHHHH
Q 011794 142 NPEKLIVEFENARVLVTDQK-------------ISAIKDI-----------IPLLEKTTQLRAPLLIIAEDVTGEALATL 197 (477)
Q Consensus 142 ~~~~~~~~~~~~~Ill~~~~-------------i~~~~~l-----------~~~l~~i~~~~~~lvi~~~~i~~~al~~l 197 (477)
+++++||||+++|++ +++++++ .++++++.++|+||||++++|+++++++|
T Consensus 231 -----~~~ien~kIll~~~~Le~~k~e~~~~v~i~~~~~l~~~~~~E~~~l~~~le~I~~~g~~lvi~~~~I~~~al~~L 305 (548)
T 1q3q_A 231 -----PKRVENAKIALINEALEVKKTETDAKINITSPDQLMSFLEQEEKMLKDMVDHIAQTGANVVFVQKGIDDLAQHYL 305 (548)
T ss_dssp -----CSEESSEEEEEECSCBSCCCCSSCCCEEECSHHHHHHHHHHHHHHHHHHHHHHHHHTCCEEEESSCBCHHHHHHH
T ss_pred -----cceecCCEEEEEecCcCcccccCCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHHhCcCEEEEcCCcCHHHHHHH
Confidence 467999999999998 6777775 78899999999999999999999999999
Q ss_pred HHhhhcccceEEEeeCCCcchhhhHHHHHHHHHhCceEecCCCCCcccCCCccCCccceEEEEe---cccEEEEeCCCCh
Q 011794 198 VVNKLRGILNVAAIKAPGFGERRKALLQDIAIVTGAEFQAGDLGLLIENTSVEQLGTARKVTIR---KDSTTIIADAASK 274 (477)
Q Consensus 198 ~~n~~~~~~~v~av~~~~~~~~~~~~l~~ia~~tGa~~~~~~~~~~~~~~~~~~lG~~~~v~~~---~~~~~~~~~~~~~ 274 (477)
++|+ |+|| +++++++|+|||++|||++++ +++++++++||+|+.|++. +++|+||++|++
T Consensus 306 ~~~~------I~av-----~~~~k~~le~ia~~tGa~ii~-----~l~~~~~~~LG~a~~v~~~~ig~~~~~~~~g~~~- 368 (548)
T 1q3q_A 306 AKYG------IMAV-----RRVKKSDMEKLAKATGAKIVT-----NVKDLTPEDLGYAEVVEERKLAGENMIFVEGCKN- 368 (548)
T ss_dssp HHTT------CEEE-----CSCCHHHHHHHHHHHCCCCBS-----SGGGCCGGGCEEESEEEEEEETTEEEEEEECCSS-
T ss_pred HHCC------cEEE-----ccCCHHHHHHHHHHhCCeEec-----ccccCCHHHCCCceEEEEEEecCceEEEEecCCC-
Confidence 9987 4665 577899999999999999999 8999999999999999874 889999999976
Q ss_pred HHHHHHHHHHHHHHhhccchhhHHHHHHHHHHhcCCeEEEEecCCCHHHHHHHHHHHHHHHHHHHHHHHcC-CcCCCcHH
Q 011794 275 DEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEG-IVPGGGAA 353 (477)
Q Consensus 275 ~~~~~~i~~l~~~l~~~~~~~~~~~l~~r~~~l~~~~~tI~v~G~t~~~~~e~~~~~~dal~~~~~~l~~g-vvpGGGa~ 353 (477)
++.|||+|||+|+.+++|++|+++||++++|+++++| +|||||++
T Consensus 369 ----------------------------------~~~~TI~lrG~te~~l~E~er~l~DAl~~~r~a~~~~~ivpGGGa~ 414 (548)
T 1q3q_A 369 ----------------------------------PKAVTILIRGGTEHVIDEVERALEDAVKVVKDVMEDGAVLPAGGAP 414 (548)
T ss_dssp ----------------------------------CSSEEEEEEESSHHHHHHHHHHHHHHHHHHHHHHHSCEEEECTTHH
T ss_pred ----------------------------------CCeEEEEECCCChHHHHHHHHHHHHHHHHHHHHHHCCCcccCCcHH
Confidence 3689999999999999999999999999999999999 99999999
Q ss_pred HHHHHHhhhhhhccCCchhHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHcc----CCceeEEcCCCcccccccCC
Q 011794 354 LVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAGVEGEVVVEKVKDS----EWTTGYNAMTDKYENMLQAG 429 (477)
Q Consensus 354 e~~~s~~L~~~~~~~~~~~~~~~i~~~a~AL~~ip~~L~~NaG~d~~~~l~~l~~~----~~~~G~d~~~g~i~d~~~~g 429 (477)
|++|+++|++++.+.++. +++++++|++||+.||++|++|||+|+.+++++|++. +.++|||..+|++.||++.|
T Consensus 415 e~~~~~~L~~~~~~~~g~-~q~~i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~G~d~~~g~~~d~~~~g 493 (548)
T 1q3q_A 415 EIELAIRLDEYAKQVGGK-EALAIENFADALKIIPKTLAENAGLDTVEMLVKVISEHKNRGLGIGIDVFEGKPADMLEKG 493 (548)
T ss_dssp HHHHHHHHHHHHHHHCHH-HHHHHHHHHHHTTHHHHHHHHHTTCCHHHHHHHHHHHHHHHCTTEEEETTTTEEEETTTTT
T ss_pred HHHHHHHHHHHhhhcCCc-HHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHhhcCCCCcceeCCCCCccchhhcC
Confidence 999999999998766675 4799999999999999999999999999999999963 46899999999999999999
Q ss_pred cccchHHHHHHHHHHHHHHHHHhchhhhhhcCCCCCC
Q 011794 430 VIDPAKVTRCALQNAASVAGMVLTTQAIVVEKPKPKT 466 (477)
Q Consensus 430 I~dp~~vk~~al~~A~e~a~~lL~iD~iI~~~~~~~~ 466 (477)
||||+.+|+++|+.|+|+|++|||||++|..+|++++
T Consensus 494 I~dp~~vk~~al~~A~e~a~~iL~iD~iI~~~~~~~~ 530 (548)
T 1q3q_A 494 IIEPLRVKKQAIKSASEAAIMILRIDDVIAAKATKPE 530 (548)
T ss_dssp CEEEHHHHHHHHHHHHHHHHHHHTCCEEEECCC----
T ss_pred CEecHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcCCC
Confidence 9999999999999999999999999999999887643
No 11
>3iyg_B T-complex protein 1 subunit beta; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus} PDB: 3ktt_B 4a0o_A 4a0v_A 4a0w_A 4a13_A
Probab=100.00 E-value=5.1e-85 Score=691.70 Aligned_cols=402 Identities=19% Similarity=0.302 Sum_probs=372.2
Q ss_pred CCChHHHHHHHHHHhhhhccCCCcchHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHhccccCC-----C
Q 011794 1 MENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIE-----G 75 (477)
Q Consensus 1 ~~hp~akll~~~a~~qd~~~GDGTTt~vvLa~~Ll~~~~~li~~gi~p~~I~~g~~~a~~~~~~~L~~~s~~~~-----~ 75 (477)
++||+|||++++|++||+++||||||+|+|+++||+++.+++++|+||+.|++||++|++.++++|+++++|++ +
T Consensus 63 v~hp~Akll~e~a~~qd~e~GDGTTtvvVLA~~LL~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~~~~~ 142 (513)
T 3iyg_B 63 VDNPAAKVLVDMSRVQDDEVGDGTTSVTVLAAELLREAESLIAKKIHPQTIIAGWREATKAARQALLNSAVDHGSDEVKF 142 (513)
T ss_pred ccCHHHHHHHHHHHHhhhhhCCChhhhHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhCcCcccccccC
Confidence 58999999999999999999999999999999999999999999999999999999999999999999999987 5
Q ss_pred HHHHHHHHHHhcC------CchhHHHHHHHHHHHhCCC---Cccccc--CCCccccceEEEEeeEEcccccCCCCccCcc
Q 011794 76 RDDIKAVATISAG------NDDLIGTMIADAIDKVGPD---GVLSIE--SSSSFETTVEVEEGMEIDRGYISPQFVTNPE 144 (477)
Q Consensus 76 ~~~l~~va~ts~~------~~~~~a~lv~~av~~v~~~---~~I~i~--~g~~~~ds~~~i~G~~~~~~~~~p~~~~~~~ 144 (477)
++.|.++|+|+++ +++.|++++++|+.+++++ +.|+++ .|+++.|| ++++|++|+++|.||
T Consensus 143 ~~~l~~va~tslssK~~~~~~~~i~~livdAv~~V~~~~d~~~I~V~ki~gg~~~ds-~lv~G~v~dk~~~~~------- 214 (513)
T 3iyg_B 143 RQDLMNIAGTTLSSKLLTHHKDHFTKLAVEAVLRLKGSGNLEAIHVIKKLGGSLADS-YLDEGFLLDKKIGVN------- 214 (513)
T ss_pred HHHHHHHHHhhhcccccccchHHHHHHHHHHHHHhcccCCcCeEEEEEeCCCCccce-eEEeeEEEeccccCC-------
Confidence 7899999998875 4689999999999999987 677663 79999999 999999999999885
Q ss_pred ccchhccceeEEEeccc--------------cCCHHhHH-----------HHHHHHHhcCCCEEEEeccccHHHHHHHHH
Q 011794 145 KLIVEFENARVLVTDQK--------------ISAIKDII-----------PLLEKTTQLRAPLLIIAEDVTGEALATLVV 199 (477)
Q Consensus 145 ~~~~~~~~~~Ill~~~~--------------i~~~~~l~-----------~~l~~i~~~~~~lvi~~~~i~~~al~~l~~ 199 (477)
|+++++||||+++|++ +++++++. ++++++.++|+||||++++|+++++++|.+
T Consensus 215 -m~~~~en~kIll~~~~Le~~k~e~~~~~v~iss~~~l~~~~~~E~~~l~~~le~I~~~g~~vvi~~~~I~~~al~~L~~ 293 (513)
T 3iyg_B 215 -QPKRIENAKILIANTGMDTDKIKIFGSRVRVDSTAKVAEIEHAEKEKMKEKVERILKHGINCFINRQLIYNYPEQLFGA 293 (513)
T ss_pred -CceeecCceEEEEcCCcccccccccCCceEEcCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEcCCccHHHHHHHHH
Confidence 6788999999999984 55666664 478999999999999999999999999998
Q ss_pred hhhcccceEEEeeCCCcchhhhHHHHHHHHHhCceEecCCCCCcccCCCccCCccceEEE---EecccEEEEeCCCChHH
Q 011794 200 NKLRGILNVAAIKAPGFGERRKALLQDIAIVTGAEFQAGDLGLLIENTSVEQLGTARKVT---IRKDSTTIIADAASKDE 276 (477)
Q Consensus 200 n~~~~~~~v~av~~~~~~~~~~~~l~~ia~~tGa~~~~~~~~~~~~~~~~~~lG~~~~v~---~~~~~~~~~~~~~~~~~ 276 (477)
++ |+||+.++ +.+|+|||++|||++++ +++++++++||+|+.|+ ++++++++|++|++
T Consensus 294 ~~------I~av~~~~-----~~~le~ia~~tGa~ii~-----~l~~l~~~~LG~a~~v~~~~ig~~~~~~~~g~~~--- 354 (513)
T 3iyg_B 294 AG------VMAIEHAD-----FVGVERLALVTGGEIAS-----TFDHPELVKLGSCKLIEEVMIGEDKLIHFSGVAL--- 354 (513)
T ss_pred cC------ceEEecCC-----HHHHHHHHHHhCCEEec-----ccccCCHhHCCcccEEEEEEECCeEEEEEecCCC---
Confidence 76 58877665 68999999999999999 89999999999999998 57889999999875
Q ss_pred HHHHHHHHHHHHhhccchhhHHHHHHHHHHhcCCeEEEEecCCCHHHHHHHHHHHHHHHHHHHHHHHcC-CcCCCcHHHH
Q 011794 277 IQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEG-IVPGGGAALV 355 (477)
Q Consensus 277 ~~~~i~~l~~~l~~~~~~~~~~~l~~r~~~l~~~~~tI~v~G~t~~~~~e~~~~~~dal~~~~~~l~~g-vvpGGGa~e~ 355 (477)
++.|||+|||+|+.+++|++|+++||++++|++++++ +|||||++|+
T Consensus 355 --------------------------------~~~~tI~lrG~t~~~l~E~kr~l~DAl~~~r~av~~~~iVpGGGa~e~ 402 (513)
T 3iyg_B 355 --------------------------------GEACTIVLRGATQQILDEAERSLHDALCVLAQTVKDSRTVYGGGCSEM 402 (513)
T ss_pred --------------------------------CceEEEEecCCCHHHHHHHHHHHHHHHHHHHHHHhCCcEEeCCcHHHH
Confidence 4689999999999999999999999999999999995 9999999999
Q ss_pred HHHHhhhhhhccCCchhHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHcc----CCceeEEcCCCcccccccCCcc
Q 011794 356 HLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAGVEGEVVVEKVKDS----EWTTGYNAMTDKYENMLQAGVI 431 (477)
Q Consensus 356 ~~s~~L~~~~~~~~~~~~~~~i~~~a~AL~~ip~~L~~NaG~d~~~~l~~l~~~----~~~~G~d~~~g~i~d~~~~gI~ 431 (477)
+|+++|++++.+.++.+ |+++++|++||+.||++|++|||+|+.+++++|++. ++++|||+.+|++.||++.|||
T Consensus 403 ~~~~~L~~~~~~~~g~~-q~~i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~G~d~~~g~~~d~~~~gI~ 481 (513)
T 3iyg_B 403 LMAHAVTQLASRTPGKE-AVAMESYAKALRMLPTIIADNAGYDSADLVAQLRAAHSEGKTTAGLDMKEGTIGDMSVLGIT 481 (513)
T ss_pred HHHHHHHHHhhccCcHH-HHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHhcCCCceeecCCCCCccchHhccCE
Confidence 99999999988878865 799999999999999999999999999999999983 5689999999999999999999
Q ss_pred cchHHHHHHHHHHHHHHHHHhchhhhhhcCCC
Q 011794 432 DPAKVTRCALQNAASVAGMVLTTQAIVVEKPK 463 (477)
Q Consensus 432 dp~~vk~~al~~A~e~a~~lL~iD~iI~~~~~ 463 (477)
||+.||+++|+.|+|+|++|||||++|..+|+
T Consensus 482 dp~~vk~~al~~A~~~a~~iL~id~ii~~~~~ 513 (513)
T 3iyg_B 482 ESFQVKRQVLLSAAEAAEVILRVDNIIKAAPR 513 (513)
T ss_pred ecHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 99999999999999999999999999988764
No 12
>3iyg_H T-complex protein 1 subunit ETA; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=6.2e-85 Score=690.77 Aligned_cols=404 Identities=18% Similarity=0.260 Sum_probs=371.9
Q ss_pred CCChHHHHHHHHHHhhhhccCCCcchHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHhccccCC--C---
Q 011794 1 MENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIE--G--- 75 (477)
Q Consensus 1 ~~hp~akll~~~a~~qd~~~GDGTTt~vvLa~~Ll~~~~~li~~gi~p~~I~~g~~~a~~~~~~~L~~~s~~~~--~--- 75 (477)
++||+|||++++|++||+++||||||+|+|+++||+++.+++++|+||+.|++||++|++.++++|+++++|++ +
T Consensus 62 v~hP~Akll~e~a~~qd~~~GDGTTtvvVLA~~Ll~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~a~~v~~~~~~~ 141 (515)
T 3iyg_H 62 VVHPAAKTLVDIAKSQDAEVGDGTTSVTLLAAEFLKQVKPYVEEGLHPQIIIRAFRTATQLAVNKIKEIAVTVKKEDKVE 141 (515)
T ss_pred CCCHHHHHHHHHHHHhhceeCcchhhHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhhcccccCChHH
Confidence 58999999999999999999999999999999999999999999999999999999999999999999999985 5
Q ss_pred -HHHHHHHHHHhcC------CchhHHHHHHHHHHHhCCC---Ccccc--cCCCccccceEEEEeeEEcccccCCCCccCc
Q 011794 76 -RDDIKAVATISAG------NDDLIGTMIADAIDKVGPD---GVLSI--ESSSSFETTVEVEEGMEIDRGYISPQFVTNP 143 (477)
Q Consensus 76 -~~~l~~va~ts~~------~~~~~a~lv~~av~~v~~~---~~I~i--~~g~~~~ds~~~i~G~~~~~~~~~p~~~~~~ 143 (477)
++.|.++|+|+++ +++.|++++++|+.+++.+ ++|++ .+|+++.|| ++++|++|+++|.||||.+
T Consensus 142 ~~~~L~~va~tsl~sK~~s~~~~~i~~livdAv~~V~~~~d~~~I~V~k~~Gg~~~ds-~lv~G~~~dk~~~~p~~~~-- 218 (515)
T 3iyg_H 142 QRKLLEKCAMTALSSKLISQQKAFFAKMVVDAVMMLDDLLQLKMIGIKKVQGGALEES-QLVAGVAFKKTFSYAGFEM-- 218 (515)
T ss_pred HHHHHHHHHHHHhcCCcccccHHHHHHHHHHHHHHhcccCCcceEEEEecCCCCccce-EEEeeeEEecCccCccccc--
Confidence 5678999999874 5789999999999999866 66665 478899998 9999999999999999865
Q ss_pred cccchhccceeEEEeccc-------------cCCHHhH-----------HHHHHHHHhcCCCEEEEeccccHHHHHHHHH
Q 011794 144 EKLIVEFENARVLVTDQK-------------ISAIKDI-----------IPLLEKTTQLRAPLLIIAEDVTGEALATLVV 199 (477)
Q Consensus 144 ~~~~~~~~~~~Ill~~~~-------------i~~~~~l-----------~~~l~~i~~~~~~lvi~~~~i~~~al~~l~~ 199 (477)
+|.+++||||+++|++ +++++++ .++++++.+.|+||||++++|++.++++|.+
T Consensus 219 --~p~~~en~kIll~~~~Le~~k~e~~~~v~is~~~~l~~~~~~E~~~l~~~le~I~~~g~~vvi~~~~I~dla~~~l~~ 296 (515)
T 3iyg_H 219 --QPKKYHNPMIALLNVELELKAEKDNAEIRVHTVEDYQAIVDAEWNILYDKLEKIHHSGAKVVLSKLPIGDVATQYFAD 296 (515)
T ss_pred --CCccccccEEEEEcccccccccccCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEECCcccHHHHHHHHH
Confidence 4568999999999995 5667665 5679999999999999999999999999987
Q ss_pred hhhcccceEEEeeCCCcchhhhHHHHHHHHHhCceEecCCCCCcccCCCccCCccceEEEEe---cccEEEEeCCCChHH
Q 011794 200 NKLRGILNVAAIKAPGFGERRKALLQDIAIVTGAEFQAGDLGLLIENTSVEQLGTARKVTIR---KDSTTIIADAASKDE 276 (477)
Q Consensus 200 n~~~~~~~v~av~~~~~~~~~~~~l~~ia~~tGa~~~~~~~~~~~~~~~~~~lG~~~~v~~~---~~~~~~~~~~~~~~~ 276 (477)
+++ ++ ++++++.+|+|||++|||++++ +++++++++||+|+.|++. +++++||++|+++
T Consensus 297 ~gI------~~-----v~~~~k~~leria~~tGa~ii~-----~l~~~~~~~LG~a~~v~~~~ig~~~~~~i~g~~~~-- 358 (515)
T 3iyg_H 297 RDM------FC-----AGRVPEEDLKRTMMACGGSIQT-----SVNALSSDVLGRCQVFEETQIGGERYNFFTGCPKA-- 358 (515)
T ss_pred cCC------cc-----cccccHHHHHHHHHHhCCEEee-----ccccCCHHHCCcccEEEEEEEcCeEEEEEecCCCC--
Confidence 664 33 5788999999999999999999 8999999999999999864 7899999999764
Q ss_pred HHHHHHHHHHHHhhccchhhHHHHHHHHHHhcCCeEEEEecCCCHHHHHHHHHHHHHHHHHHHHHHHcC-CcCCCcHHHH
Q 011794 277 IQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEG-IVPGGGAALV 355 (477)
Q Consensus 277 ~~~~i~~l~~~l~~~~~~~~~~~l~~r~~~l~~~~~tI~v~G~t~~~~~e~~~~~~dal~~~~~~l~~g-vvpGGGa~e~ 355 (477)
+.|||+|||+|+.+++|++|+++||++++|++++++ +|||||++|+
T Consensus 359 ---------------------------------~~~tI~lrG~t~~~l~E~kr~i~DAl~~~r~~v~~~~iVpGGGa~e~ 405 (515)
T 3iyg_H 359 ---------------------------------KTCTIILRGGAEQFMEETERSLHDAIMIVRRAIKNDSVVAGGGAIEM 405 (515)
T ss_pred ---------------------------------ceEEEEEeCCcHHHHHHHHHHHHHHHHHHHHHhhCCCeecCCcHHHH
Confidence 579999999999999999999999999999999996 9999999999
Q ss_pred HHHHhhhhhhccCCchhHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHcc----CCceeEEcCCCcccccccCCcc
Q 011794 356 HLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAGVEGEVVVEKVKDS----EWTTGYNAMTDKYENMLQAGVI 431 (477)
Q Consensus 356 ~~s~~L~~~~~~~~~~~~~~~i~~~a~AL~~ip~~L~~NaG~d~~~~l~~l~~~----~~~~G~d~~~g~i~d~~~~gI~ 431 (477)
+++++|++++.+.++.+ |+++++|++||+.||++|++|||+|+.+++++|++. ++++|||+.+|++.||++.|||
T Consensus 406 ~~s~~L~~~~~~~~g~e-q~~i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~G~d~~~g~~~dm~~~gI~ 484 (515)
T 3iyg_H 406 ELSKYLRDYSRTIPGKQ-QLLIGAYAKALEIIPRQLCDNAGFDATNILNKLRARHAQGGMWYGVDINTEDIADNFEAFVW 484 (515)
T ss_pred HHHHHHHHHHhcCChHH-HHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHhhccCCCeeEeCCCCcccccHhccCE
Confidence 99999999988888875 799999999999999999999999999999999884 4579999999999999999999
Q ss_pred cchHHHHHHHHHHHHHHHHHhchhhhhhcC
Q 011794 432 DPAKVTRCALQNAASVAGMVLTTQAIVVEK 461 (477)
Q Consensus 432 dp~~vk~~al~~A~e~a~~lL~iD~iI~~~ 461 (477)
||+.||+++|+.|+|+|++|||||++|+.+
T Consensus 485 dp~~vk~~al~~A~~~a~~iL~iD~ii~~~ 514 (515)
T 3iyg_H 485 EPAMVRINALTAASEAACLIVSVDETIKNP 514 (515)
T ss_pred ECHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 999999999999999999999999999754
No 13
>3iyg_A T-complex protein 1 subunit alpha; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=6.6e-85 Score=693.21 Aligned_cols=406 Identities=21% Similarity=0.258 Sum_probs=368.2
Q ss_pred CCChHHHHHHHHHHhhhhccCCCcchHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHh-ccccCC--CHH
Q 011794 1 MENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEK-RARPIE--GRD 77 (477)
Q Consensus 1 ~~hp~akll~~~a~~qd~~~GDGTTt~vvLa~~Ll~~~~~li~~gi~p~~I~~g~~~a~~~~~~~L~~-~s~~~~--~~~ 77 (477)
++||+|||++++|++||+++||||||+|+||++||+++.+++++|+||+.|++||+.|++.++++|++ ++++++ +++
T Consensus 61 v~hP~akll~~~a~~qd~e~GDGTTtvvvLA~eLL~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~~s~~v~~~~~e 140 (529)
T 3iyg_A 61 VEHPAAKVLCELADLQDKEVGDGTTSVVIIAAELLKNADELVKQKIHPTSVISGYRLACKEAVRYISENLIINTDELGRD 140 (529)
T ss_pred cCChHHHHHHHHHHHhhhhhCCChhhHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCHH
Confidence 58999999999999999999999999999999999999999999999999999999999999999999 999987 789
Q ss_pred HHHHHHHHhcC------CchhHHHHHHHHHHHhC---CCC-----c--ccc--cCCCccccceEEEEeeEEcccccCCCC
Q 011794 78 DIKAVATISAG------NDDLIGTMIADAIDKVG---PDG-----V--LSI--ESSSSFETTVEVEEGMEIDRGYISPQF 139 (477)
Q Consensus 78 ~l~~va~ts~~------~~~~~a~lv~~av~~v~---~~~-----~--I~i--~~g~~~~ds~~~i~G~~~~~~~~~p~~ 139 (477)
.|.++|+||++ ++++|++++++|+.+++ ++| . |++ .+|+++.|| ++++|++|+++|.||+
T Consensus 141 ~l~~va~tsl~sK~~~~~~~~i~~livdAv~~V~~~~~~g~~~~dv~~I~I~k~~G~~~~ds-~lv~G~v~dk~~~~~~- 218 (529)
T 3iyg_A 141 CLINAAKTSMSSKVIGINGDFFANLVVDAVLAIKYTDIRGQPRYPVNSINVLKAHGRSQMES-MLINGYALNCVVGSQG- 218 (529)
T ss_pred HHHHHHHHHhccCcccccHHHHHHHHHHHHHHHhhhccCCCcccccceEEEEEecCCCccce-EEEeeeEEecCccccc-
Confidence 99999999975 47999999999999997 344 1 444 589999998 9999999999999987
Q ss_pred ccCccccchhccceeEEEecccc-------------CCHHh-----------HHHHHHHHHhcCCCEEEEeccccHHHHH
Q 011794 140 VTNPEKLIVEFENARVLVTDQKI-------------SAIKD-----------IIPLLEKTTQLRAPLLIIAEDVTGEALA 195 (477)
Q Consensus 140 ~~~~~~~~~~~~~~~Ill~~~~i-------------~~~~~-----------l~~~l~~i~~~~~~lvi~~~~i~~~al~ 195 (477)
|++.++||||+++|+++ +++++ +.++++++.++|+||||++++|++.+++
T Consensus 219 ------m~~~ien~kIlll~~~le~~k~e~~~~v~i~~~~~~~~i~~~E~~~l~~~v~kI~~~g~nvvi~~~~I~d~al~ 292 (529)
T 3iyg_A 219 ------MPKRIVNAKIACLDFSLQKTKMKLGVQVVITDPEKLDQIRQRESDITKERIQKILATGANVILTTGGIDDMCLK 292 (529)
T ss_pred ------CCcccCCceEEEecCCcccccccCCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEECCCCCHHHHH
Confidence 46789999999999975 33333 5678899999999999999999999999
Q ss_pred HHHHhhhcccceEEEeeCCCcchhhhHHHHHHHHHhCceEecCCCCCc-ccCCCccCCccceEEE---EecccEEEEeCC
Q 011794 196 TLVVNKLRGILNVAAIKAPGFGERRKALLQDIAIVTGAEFQAGDLGLL-IENTSVEQLGTARKVT---IRKDSTTIIADA 271 (477)
Q Consensus 196 ~l~~n~~~~~~~v~av~~~~~~~~~~~~l~~ia~~tGa~~~~~~~~~~-~~~~~~~~lG~~~~v~---~~~~~~~~~~~~ 271 (477)
+|.+|++ +|| +++++++|+|||++|||+++++..+++ .+++++++||+|+.|+ +++++++||++|
T Consensus 293 ~L~~~gI------~av-----~~v~k~~leria~~tGa~iv~~~~~l~~~e~~~~~~LG~a~~v~~~~ig~~~~~~~~g~ 361 (529)
T 3iyg_A 293 YFVEAGA------MAV-----RRVLKRDLKRIAKASGATVLSTLANLEGEETFEASMLGQAEEVVQERICDDELILIKNT 361 (529)
T ss_pred HHHHcCC------cee-----ccCCHHHHHHHHHHhCCeeecchhcccchhccChhhCccceEEEEEEeCCceEEEEEcC
Confidence 9999974 554 567899999999999999999433332 2345578899999998 678999999999
Q ss_pred CChHHHHHHHHHHHHHHhhccchhhHHHHHHHHHHhcCCeEEEEecCCCHHHHHHHHHHHHHHHHHHHHHHHcC-CcCCC
Q 011794 272 ASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEG-IVPGG 350 (477)
Q Consensus 272 ~~~~~~~~~i~~l~~~l~~~~~~~~~~~l~~r~~~l~~~~~tI~v~G~t~~~~~e~~~~~~dal~~~~~~l~~g-vvpGG 350 (477)
+++ +.|||+|||+|+.+++|.+|+++||++++|+++++| +||||
T Consensus 362 ~~~-----------------------------------~~~TI~lrG~t~~~l~E~er~l~Dal~v~r~~v~~~~iVpGG 406 (529)
T 3iyg_A 362 KAR-----------------------------------TSASVILRGANDFMCDEMERSLHDALCVVKRVLESKSVVPGG 406 (529)
T ss_pred CCC-----------------------------------ceEEEEECCchHHHHHHHHHHHHHHHHHHHHHhhCCeEEeCC
Confidence 764 579999999999999999999999999999999999 99999
Q ss_pred cHHHHHHHHhhhhhhccCCchhHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHcc----C--------CceeEEcC
Q 011794 351 GAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAGVEGEVVVEKVKDS----E--------WTTGYNAM 418 (477)
Q Consensus 351 Ga~e~~~s~~L~~~~~~~~~~~~~~~i~~~a~AL~~ip~~L~~NaG~d~~~~l~~l~~~----~--------~~~G~d~~ 418 (477)
||+|++|+++|++++.++++.+ |+++++|++||+.||++||+|||+|+.+++++|++. + .++|+|+.
T Consensus 407 Ga~E~~ls~~L~~~~~~~~g~e-q~~i~~fa~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~~~~~~~~~G~d~~ 485 (529)
T 3iyg_A 407 GAVEAALSIYLENYATSMGSRE-QLAIAEFARSLLVIPNTLAVNAAQDSTDLVAKLRAFHNEAQVNPERKNLKWIGLDLV 485 (529)
T ss_pred cHHHHHHHHHHHHHhhhcCChH-HHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHhccccccccccCceeeeeCC
Confidence 9999999999999998888876 799999999999999999999999999999999883 2 57999999
Q ss_pred CCcccccccCCcccchHHHHHHHHHHHHHHHHHhchhhhhhcC
Q 011794 419 TDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAIVVEK 461 (477)
Q Consensus 419 ~g~i~d~~~~gI~dp~~vk~~al~~A~e~a~~lL~iD~iI~~~ 461 (477)
+|++.||++.|||||+.+|+++|+.|+|+|++|||||++|...
T Consensus 486 ~g~~~d~~~~gV~dp~~vk~~al~~A~e~a~~iL~iD~ii~~~ 528 (529)
T 3iyg_A 486 NGKPRDNKQAGVFEPTIVKVKSLKFATEAAITILRIDDLIKLH 528 (529)
T ss_pred CCCccChhhccCEecHHHHHHHHHHHHHHHHHHHhHHhhhcCC
Confidence 9999999999999999999999999999999999999999874
No 14
>1a6d_A Thermosome (alpha subunit); group II chaperonin, CCT, TRIC, PR folding, ATPase, chaperonin; 2.60A {Thermoplasma acidophilum} SCOP: a.129.1.2 c.8.5.2 d.56.1.2 PDB: 1a6e_A*
Probab=100.00 E-value=7.9e-86 Score=701.96 Aligned_cols=403 Identities=22% Similarity=0.345 Sum_probs=370.9
Q ss_pred CCChHHHHHHHHHHhhhhccCCCcchHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHhccccCC-CHHHH
Q 011794 1 MENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIE-GRDDI 79 (477)
Q Consensus 1 ~~hp~akll~~~a~~qd~~~GDGTTt~vvLa~~Ll~~~~~li~~gi~p~~I~~g~~~a~~~~~~~L~~~s~~~~-~~~~l 79 (477)
++||+|||++++|++||+++||||||+|+||++||+++.+++++|+||+.|++||+.|++.++++|+++++| + +++.|
T Consensus 73 v~hP~Akll~e~a~~qd~e~GDGTTtvvvLA~~LL~~a~~ll~~GihP~~I~~G~~~A~~~a~~~L~~~s~~-~~~~~~l 151 (545)
T 1a6d_A 73 VEHPTAKMIVEVSKAQDTAVGDGTTTAVVLSGELLKQAETLLDQGVHPTVISNGYRLAVNEARKIIDEIAEK-STDDATL 151 (545)
T ss_dssp CCSHHHHHHHGGGGCTTTCSTTHHHHHHHHHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHCEE-CCCHHHH
T ss_pred ccchHHHHHHHHHHhcCCEECCChhHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhcCC-CCCHHHH
Confidence 589999999999999999999999999999999999999999999999999999999999999999999999 7 88999
Q ss_pred HHHHHHhcC------CchhHHHHHHHHHHHhCCC---------Cccccc--CCCccccceEEEEeeEEcccccCCCCccC
Q 011794 80 KAVATISAG------NDDLIGTMIADAIDKVGPD---------GVLSIE--SSSSFETTVEVEEGMEIDRGYISPQFVTN 142 (477)
Q Consensus 80 ~~va~ts~~------~~~~~a~lv~~av~~v~~~---------~~I~i~--~g~~~~ds~~~i~G~~~~~~~~~p~~~~~ 142 (477)
.++|+|+++ +++.|++++++|+.+++++ ++|+++ +|++++|| ++++|++|+++|.||+|
T Consensus 152 ~~va~tsl~sKi~~~~~~~i~~livdAv~~v~~~~~g~~~~d~~~I~V~k~~G~~~~ds-~lv~G~v~dk~~~~~~m--- 227 (545)
T 1a6d_A 152 RKIALTALSGKNTGLSNDFLADLVVKAVNAVAEVRDGKTIVDTANIKVDKKNGGSVNDT-QFISGIVIDKEKVHSKM--- 227 (545)
T ss_dssp HHHHHHHTTTSSCCSTHHHHHHHHHHHHHHHCEESSSSEECCGGGEEEEECCCSCSTTC-EEESEEEESCCCSCTTS---
T ss_pred HHHHHHHHhcccccccHHHHHHHHHHHHHHHhcccCCCcccccceEEEEEecCCCceee-EEEeeEEEeccCCCCCC---
Confidence 999999864 4699999999999999875 256665 99999999 99999999999999985
Q ss_pred ccccchhccceeEEEeccc-------------cCCHHhH-----------HHHHHHHHhcCCCEEEEeccccHHHHHHHH
Q 011794 143 PEKLIVEFENARVLVTDQK-------------ISAIKDI-----------IPLLEKTTQLRAPLLIIAEDVTGEALATLV 198 (477)
Q Consensus 143 ~~~~~~~~~~~~Ill~~~~-------------i~~~~~l-----------~~~l~~i~~~~~~lvi~~~~i~~~al~~l~ 198 (477)
+++++||||+++|++ +++++++ .++++++.++|+||||++++|+++++++|+
T Consensus 228 ----~~~ien~kIll~~~~Le~~k~e~~~~v~i~~~~~l~~~~~~E~~~l~~~le~I~~~g~~lvi~~~~I~~~al~~L~ 303 (545)
T 1a6d_A 228 ----PDVVKNAKIALIDSALEIKKTEIEAKVQISDPSKIQDFLNQETNTFKQMVEKIKKSGANVVLCQKGIDDVAQHYLA 303 (545)
T ss_dssp ----CSEEEEEEEEEECSCBSCCCCSSCCEEEECSTTHHHHHHHHHHHHHHHHHHHHHHTTCCEEEESSCBCHHHHHHHH
T ss_pred ----cceecCCEEEEEecCCCcccccCCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEECCCccHHHHHHHH
Confidence 467899999999998 6667665 788999999999999999999999999999
Q ss_pred HhhhcccceEEEeeCCCcchhhhHHHHHHHHHhCceEecCCCCCcccCCCccCCccceEEEEe---cccEEEEeCCCChH
Q 011794 199 VNKLRGILNVAAIKAPGFGERRKALLQDIAIVTGAEFQAGDLGLLIENTSVEQLGTARKVTIR---KDSTTIIADAASKD 275 (477)
Q Consensus 199 ~n~~~~~~~v~av~~~~~~~~~~~~l~~ia~~tGa~~~~~~~~~~~~~~~~~~lG~~~~v~~~---~~~~~~~~~~~~~~ 275 (477)
+|+ |+|| +++++++|+|||++|||++++ +++++++++||+|+.|++. +++|+||++|++
T Consensus 304 ~~~------I~av-----~~~~k~~le~ia~~tGa~iis-----~l~~~~~~~LG~a~~v~~~~ig~~~~~~~~g~~~-- 365 (545)
T 1a6d_A 304 KEG------IYAV-----RRVKKSDMEKLAKATGAKIVT-----DLDDLTPSVLGEAETVEERKIGDDRMTFVMGCKN-- 365 (545)
T ss_dssp HHT------CEEE-----CSCCHHHHHHHHHHHCCCEES-----SGGGCCGGGCEEEEEEEEEEETTEEEEEEEEESC--
T ss_pred HCC------eeEe-----ccCCHHHHHHHHHHhCCeeec-----ccccCCHHHCCCceEEEEEEecCceEEEEecCCC--
Confidence 987 4665 577899999999999999999 8999999999999999874 789999999876
Q ss_pred HHHHHHHHHHHHHhhccchhhHHHHHHHHHHhcCCeEEEEecCCCHHHHHHHHHHHHHHHHHHHHHHHcC-CcCCCcHHH
Q 011794 276 EIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEG-IVPGGGAAL 354 (477)
Q Consensus 276 ~~~~~i~~l~~~l~~~~~~~~~~~l~~r~~~l~~~~~tI~v~G~t~~~~~e~~~~~~dal~~~~~~l~~g-vvpGGGa~e 354 (477)
++.|||+|||+|+.+++|++|+++||++++|+++++| +|||||++|
T Consensus 366 ---------------------------------~~~~TI~lrG~te~~l~E~kr~l~DAl~~~r~a~~~g~iVpGGGa~e 412 (545)
T 1a6d_A 366 ---------------------------------PKAVSILIRGGTDHVVSEVERALNDAIRVVAITKEDGKFLWGGGAVE 412 (545)
T ss_dssp ---------------------------------SSCEEEEECCSSSTTHHHHHHHHHHHHHHHHHHHHHCEEEETTTHHH
T ss_pred ---------------------------------CceEEEEEcCCCHHHHHHHHHHHHHHHHHHHHHHhCCCEEeCcCHHH
Confidence 3689999999999999999999999999999999999 999999999
Q ss_pred HHHHHhhhhhhccCCchhHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHcc----CCceeEEcCCCcccccccCCc
Q 011794 355 VHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAGVEGEVVVEKVKDS----EWTTGYNAMTDKYENMLQAGV 430 (477)
Q Consensus 355 ~~~s~~L~~~~~~~~~~~~~~~i~~~a~AL~~ip~~L~~NaG~d~~~~l~~l~~~----~~~~G~d~~~g~i~d~~~~gI 430 (477)
++|+++|++++.+.++.+ ++++++|++||+.||++|++|||+|+.+++++|++. +.++|||+.+|++.||++.||
T Consensus 413 ~~~~~~L~~~~~~~~g~~-q~~i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~G~d~~~g~~~d~~~~gI 491 (545)
T 1a6d_A 413 AELAMRLAKYANSVGGRE-QLAIEAFAKALEIIPRTLAENAGIDPINTLIKLKADDEKGRISVGVDLDNNGVGDMKAKGV 491 (545)
T ss_dssp HHHHHHHHHHHHTSCHHH-HHHHHHHHHHHTHHHHHHHHHHTSCHHHHHHHHHHHHHTTCTTEEEETTTTEEEEHHHHTC
T ss_pred HHHHHHHHHHhhccCccH-HHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHhhcCCCCcceecccCccccchhcCc
Confidence 999999999988777764 799999999999999999999999999999999963 468999999999999999999
Q ss_pred ccchHHHHHHHHHHHHHHHHHhchhhhhhcCCCC
Q 011794 431 IDPAKVTRCALQNAASVAGMVLTTQAIVVEKPKP 464 (477)
Q Consensus 431 ~dp~~vk~~al~~A~e~a~~lL~iD~iI~~~~~~ 464 (477)
|||+.+|+++|+.|+|+|++|||||++|..+|++
T Consensus 492 ~dp~~vk~~al~~A~e~a~~iL~id~iI~~~~~~ 525 (545)
T 1a6d_A 492 VDPLRVKTHALESAVEVATMILRIDDVIASKKST 525 (545)
T ss_dssp EEEHHHHHHHHHHHHHHHHHHHTCCEEC------
T ss_pred cccHHHHHHHHHHHHHHHHHHHHHHHHHhcccCC
Confidence 9999999999999999999999999999998876
No 15
>3p9d_A T-complex protein 1 subunit alpha; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_a* 4d8q_A* 4d8r_a*
Probab=100.00 E-value=1.7e-85 Score=700.74 Aligned_cols=411 Identities=18% Similarity=0.304 Sum_probs=375.2
Q ss_pred CCChHHHHHHHHHHhhhhccCCCcchHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHh-ccccCCC--HH
Q 011794 1 MENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEK-RARPIEG--RD 77 (477)
Q Consensus 1 ~~hp~akll~~~a~~qd~~~GDGTTt~vvLa~~Ll~~~~~li~~gi~p~~I~~g~~~a~~~~~~~L~~-~s~~~~~--~~ 77 (477)
++||+|||++++|++||+++||||||+||||++||+++.+++++|+||+.|++||++|++.++++|++ +++|++. ++
T Consensus 75 v~hP~Akll~e~a~~qd~e~GDGTTtvvVLA~~LL~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~~s~~v~~~~~e 154 (559)
T 3p9d_A 75 VQHPAGKILVELAQQQDREIGDGTTSVVIIASELLKRANELVKNKIHPTTIITGFRVALREAIRFINEVLSTSVDTLGKE 154 (559)
T ss_dssp CCSHHHHHHHHHHHHHHHHTSSCHHHHHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHHHTGGGSCC--CT
T ss_pred CCCHHHHHHHHHHHHHHHHcCCCcchHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCHH
Confidence 58999999999999999999999999999999999999999999999999999999999999999999 9999974 67
Q ss_pred HHHHHHHHhcCC------chhHHHHHHHHHHHhCC-----CCc-----ccc--cCCCccccceEEEEeeEEcccccCCCC
Q 011794 78 DIKAVATISAGN------DDLIGTMIADAIDKVGP-----DGV-----LSI--ESSSSFETTVEVEEGMEIDRGYISPQF 139 (477)
Q Consensus 78 ~l~~va~ts~~~------~~~~a~lv~~av~~v~~-----~~~-----I~i--~~g~~~~ds~~~i~G~~~~~~~~~p~~ 139 (477)
.|.++|+||+++ +++|++++++|+.++++ ++. |++ .+|++++|| ++++|++|+++|.||+|
T Consensus 155 ~L~~vA~tsl~sK~~~~~~~~i~~livdAv~~V~~~~~~~~~~i~l~~I~I~k~~Ggs~~ds-~lv~G~v~dk~~~~~~m 233 (559)
T 3p9d_A 155 TLINIAKTSMSSKIIGADSDFFSNMVVDALLAVKTQNSKGEIKYPVKAVNVLKAHGKSATES-LLVPGYALNCTVASQAM 233 (559)
T ss_dssp THHHHHHHTTSSSGGGTTHHHHHHHHHHHHHHHCCEESSSCEECCTTCCCEEEEESSCSSCC-BCCSEECCCCCCSSTTS
T ss_pred HHHHHHHHHhccCcccchhHHHHHHHHHHHHHhcccccCCCCccchhHeEEEEecCCCccce-eEeccEEEeecccCCCc
Confidence 899999999875 79999999999999984 244 333 359999998 99999999999999974
Q ss_pred ccCccccchhcc--ceeEEEecccc-------------CCHHh-----------HHHHHHHHHhcCCCEEEEeccccHHH
Q 011794 140 VTNPEKLIVEFE--NARVLVTDQKI-------------SAIKD-----------IIPLLEKTTQLRAPLLIIAEDVTGEA 193 (477)
Q Consensus 140 ~~~~~~~~~~~~--~~~Ill~~~~i-------------~~~~~-----------l~~~l~~i~~~~~~lvi~~~~i~~~a 193 (477)
+++++ ||||+++|++| +++++ +.++++++.++|+||||++++|++++
T Consensus 234 -------~~~ie~~n~kIll~~~~Le~~k~e~~~~v~is~~~~l~~i~~~E~~~l~~~le~I~~~g~~lvI~~~~I~~~a 306 (559)
T 3p9d_A 234 -------PKRIAGGNVKIACLDLNLQKARMAMGVQINIDDPEQLEQIRKREAGIVLERVKKIIDAGAQVVLTTKGIDDLC 306 (559)
T ss_dssp -------CSEECSSSBCEEEETTCCSCCCCCTTCCEEECSSSCHHHHHHHHHHHHHHHHHHHHTTCCSEEEESSCCCGGG
T ss_pred -------ceeeccCCceEEEEeccccccccccCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhhCCCEEEEcCCCCHHH
Confidence 56788 99999999986 34444 57889999999999999999999999
Q ss_pred HHHHHHhhhcccceEEEeeCCCcchhhhHHHHHHHHHhCceEecCCCCCcc-cCCCccCCccceEEE---EecccEEEEe
Q 011794 194 LATLVVNKLRGILNVAAIKAPGFGERRKALLQDIAIVTGAEFQAGDLGLLI-ENTSVEQLGTARKVT---IRKDSTTIIA 269 (477)
Q Consensus 194 l~~l~~n~~~~~~~v~av~~~~~~~~~~~~l~~ia~~tGa~~~~~~~~~~~-~~~~~~~lG~~~~v~---~~~~~~~~~~ 269 (477)
+++|++|++ ++| +++++.+|+|||++|||+++++..++.. +++++++||+|+.|+ +++++|+||+
T Consensus 307 l~~L~~~~I------~av-----~~~~k~~le~ia~~TGa~iis~~~~l~~~e~~~~~~LG~a~~v~~~~ig~~~~~~~~ 375 (559)
T 3p9d_A 307 LKEFVEAKI------MGV-----RRCKKEDLRRIARATGATLVSSMSNLEGEETFESSYLGLCDEVVQAKFSDDECILIK 375 (559)
T ss_dssp THHHHHTTC------EEE-----SSCCHHHHHHHHHHSSCCCBCCSCCSTTCCCCCTTTSCCEEEEEEEECSSCEEECEE
T ss_pred HHHHHHcCC------ceE-----ccCCHHHHHHHHHHhCCEEEeccccccccccCCHhHCccceEEEEEEEcCceEEEEE
Confidence 999999985 554 6788999999999999999996544443 789999999999998 5788999999
Q ss_pred CCCChHHHHHHHHHHHHHHhhccchhhHHHHHHHHHHhcCCeEEEEecCCCHHHHHHHHHHHHHHHHHHHHHHHcC-CcC
Q 011794 270 DAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEG-IVP 348 (477)
Q Consensus 270 ~~~~~~~~~~~i~~l~~~l~~~~~~~~~~~l~~r~~~l~~~~~tI~v~G~t~~~~~e~~~~~~dal~~~~~~l~~g-vvp 348 (477)
+|++ +++|||+|||+|+.+++|++|+++||++++|+++++| +||
T Consensus 376 g~~~-----------------------------------~~~~tI~lrG~te~~l~E~kr~l~DAL~~~r~av~~g~iVp 420 (559)
T 3p9d_A 376 GTSK-----------------------------------HSSSSIILRGANDYSLDEMERSLHDSLSVVKRTLESGNVVP 420 (559)
T ss_dssp EESS-----------------------------------SCCCCEEEEESCHHHHHHHHHHHHHHHHHHHHHHTSSCEEC
T ss_pred cCCC-----------------------------------CCEEEEEEcCCCHHHHHHHHHHHHHHHHHHHHHhhcCCEEe
Confidence 9876 4689999999999999999999999999999999999 999
Q ss_pred CCcHHHHHHHHhhhhhhccCCchhHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHcc----CC------------c
Q 011794 349 GGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAGVEGEVVVEKVKDS----EW------------T 412 (477)
Q Consensus 349 GGGa~e~~~s~~L~~~~~~~~~~~~~~~i~~~a~AL~~ip~~L~~NaG~d~~~~l~~l~~~----~~------------~ 412 (477)
|||++|++|+++|++++.+.++.+ |+++++|++||+.||++|++|||+|+.+++++|++. ++ +
T Consensus 421 GGGa~e~~~s~~L~~~~~~~~g~e-q~~i~~~a~ALe~ip~~La~NaG~d~~~vv~~l~~~h~~~~~~~~~~~~~~~~~~ 499 (559)
T 3p9d_A 421 GGGCVEAALNIYLDNFATTVGSRE-QLAIAEFAAALLIIPKTLAVNAAKDSSELVAKLRSYHAASQMAKPEDVKRRSYRN 499 (559)
T ss_dssp TTTTHHHHHHHHHHHHHTTSCTTH-HHHHHHHHHHHHHHHHHHHHTSSSCCHHHHHHHHHHHHTTSCCC----CCCCCCC
T ss_pred CccHHHHHHHHHHHHHhcccChHH-HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHhccccccccccccccccc
Confidence 999999999999999998887865 799999999999999999999999999999999873 33 7
Q ss_pred eeEEcCCCcccccccCCcccchHHHHHHHHHHHHHHHHHhchhhhhhcCCCCCC
Q 011794 413 TGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAIVVEKPKPKT 466 (477)
Q Consensus 413 ~G~d~~~g~i~d~~~~gI~dp~~vk~~al~~A~e~a~~lL~iD~iI~~~~~~~~ 466 (477)
+|||+.+|++.||++.|||||+.||+++|+.|+|+|++|||||++|...|+++.
T Consensus 500 ~G~d~~~g~~~dm~~~gI~dp~~vk~~al~~A~e~a~~iL~id~ii~~~~~~~~ 553 (559)
T 3p9d_A 500 YGLDLIRGKIVDEIHAGVLEPTISKVKSLKSALEACVAILRIDTMITVDPEPPK 553 (559)
T ss_dssp EEECTTSSSEEESTTSSCCEEHHHHHHHHHHHHHHHHHHHTEEEEEECCCCCCC
T ss_pred eeEECCCCcEeehhhccCEecHHHHHHHHHHHHHHHHHHHhHHhhhhcCCcccc
Confidence 999999999999999999999999999999999999999999999998877653
No 16
>3p9d_G T-complex protein 1 subunit ETA; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_g* 4d8q_G* 4d8r_g*
Probab=100.00 E-value=6.6e-86 Score=702.64 Aligned_cols=410 Identities=18% Similarity=0.255 Sum_probs=371.3
Q ss_pred CCChHHHHHHHHHHhhhhccCCCcchHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHhccccCC--C---
Q 011794 1 MENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIE--G--- 75 (477)
Q Consensus 1 ~~hp~akll~~~a~~qd~~~GDGTTt~vvLa~~Ll~~~~~li~~gi~p~~I~~g~~~a~~~~~~~L~~~s~~~~--~--- 75 (477)
++||+|||++++|++||+++||||||+||||++||+++.+++++|+||+.|++||++|++.++++|+++++|++ +
T Consensus 75 v~hP~Akll~e~a~~qd~e~GDGTTtvvVLA~~Ll~~a~~lv~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~~~~~ 154 (550)
T 3p9d_G 75 VVHPAAKTLVDISRAQDAEVGDGTTSVTILAGELMKEAKPFLEEGISSHLIMKGYRKAVSLAVEKINELAVDITSEKSSG 154 (550)
T ss_dssp CCSHHHHHHHHHHHHHHTTTSSCHHHHHHHHHHHHHTTSHHHHSSSCTTHHHHHHHHHHHHHHHHHHHSEECCCCC----
T ss_pred CCCHHHHHHHHHHHHhhhhhCCCceehHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhcccCCCCcchh
Confidence 58999999999999999999999999999999999999999999999999999999999999999999999986 3
Q ss_pred HHHHHHHHHHhcC------CchhHHHHHHHHHHHhCCC-------CcccccCCCccccceEEEEeeEEcccccCCCCccC
Q 011794 76 RDDIKAVATISAG------NDDLIGTMIADAIDKVGPD-------GVLSIESSSSFETTVEVEEGMEIDRGYISPQFVTN 142 (477)
Q Consensus 76 ~~~l~~va~ts~~------~~~~~a~lv~~av~~v~~~-------~~I~i~~g~~~~ds~~~i~G~~~~~~~~~p~~~~~ 142 (477)
++.|.++|+||++ +++.|++++++|+.+++++ +.++ ++|++++|| ++++|++|+++|.||||.+
T Consensus 155 ~~~L~~vA~tsl~sK~~~~~~~~i~~livdAv~~V~~~~~dl~~I~Vik-v~Gg~~~ds-~lv~G~~~dk~~~s~yf~~- 231 (550)
T 3p9d_G 155 RELLERCARTAMSSKLIHNNADFFVKMCVDAVLSLDRNDLDDKLIGIKK-IPGGAMEES-LFINGVAFKKTFSYAGFEQ- 231 (550)
T ss_dssp --CHHHHHHHHHHHTTTGGGHHHHHHHHHHHHHHCCSSSCCGGGCCCCB-CCSSCGGGC-CCCSSEEECCCSSCTTCSC-
T ss_pred HHHHHHHHHHhccCccccccHhHHHHHHHHHHHHhCccccCchheeEEE-ecCCCccce-eEEeeEEEecccccccccc-
Confidence 6789999999864 4789999999999999843 3333 469999999 9999999999999999964
Q ss_pred ccccchhccceeEEEeccc-------------cCCHHhHH-----------HHHHHHHhcCCCEEEEeccccHHHHHHHH
Q 011794 143 PEKLIVEFENARVLVTDQK-------------ISAIKDII-----------PLLEKTTQLRAPLLIIAEDVTGEALATLV 198 (477)
Q Consensus 143 ~~~~~~~~~~~~Ill~~~~-------------i~~~~~l~-----------~~l~~i~~~~~~lvi~~~~i~~~al~~l~ 198 (477)
|++.++||||+++|++ +++++++. ++++++.++|+||||++++|++.++++|.
T Consensus 232 ---~~~~~en~kIll~~~~Le~~k~e~~~~v~is~~~~l~~il~~E~~~l~~~v~~I~~~g~~vVi~~~~I~dla~~~L~ 308 (550)
T 3p9d_G 232 ---QPKKFNNPKILSLNVELELKAEKDNAEVRVEHVEDYQAIVDAEWQLIFEKLRQVEETGANIVLSKLPIGDLATQFFA 308 (550)
T ss_dssp ---SCSCCSSCCEEEECSCCSCCCCSSCEEEEECSSSHHHHHHHHHHHHHHHHHHHHHTTTCSEEEESSCCCHHHHHTTG
T ss_pred ---CcccccCceEEEeccccccccccccceeeeCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEECCCccHHHHHHHH
Confidence 5667999999999998 45665554 47888999999999999999999999998
Q ss_pred HhhhcccceEEEeeCCCcchhhhHHHHHHHHHhCceEecCCCCCcccCCCccCCccceEEEE---ecccEEEEeCCCChH
Q 011794 199 VNKLRGILNVAAIKAPGFGERRKALLQDIAIVTGAEFQAGDLGLLIENTSVEQLGTARKVTI---RKDSTTIIADAASKD 275 (477)
Q Consensus 199 ~n~~~~~~~v~av~~~~~~~~~~~~l~~ia~~tGa~~~~~~~~~~~~~~~~~~lG~~~~v~~---~~~~~~~~~~~~~~~ 275 (477)
++++ ++ ++++++++|+|||++|||++++ ++++++.++||+|+.|++ +++++++|++|+++
T Consensus 309 ~~gI------~~-----v~~v~k~~lerIa~~tGa~iis-----~l~~l~~~~LG~a~~v~~~~ig~e~~~~~~g~~~~- 371 (550)
T 3p9d_G 309 DRNI------FC-----AGRVSADDMNRVIQAVGGSIQS-----TTSDIKPEHLGTCALFEEMQIGSERYNLFQGCPQA- 371 (550)
T ss_dssp GGTC------EE-----EECCCTTHHHHHHHHTCCCCBS-----SGGGCCGGGCCCCSBCCCCCCSSSCCEEEBCCTTC-
T ss_pred HcCC------cc-----ccCcCHHHHHHHHHHhCCceec-----chhhCCHHHcCCceEEEEEEeCCeEEEEEecCCCC-
Confidence 7664 44 5778899999999999999999 899999999999999986 68899999999753
Q ss_pred HHHHHHHHHHHHHhhccchhhHHHHHHHHHHhcCCeEEEEecCCCHHHHHHHHHHHHHHHHHHHHHHHcC-CcCCCcHHH
Q 011794 276 EIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEG-IVPGGGAAL 354 (477)
Q Consensus 276 ~~~~~i~~l~~~l~~~~~~~~~~~l~~r~~~l~~~~~tI~v~G~t~~~~~e~~~~~~dal~~~~~~l~~g-vvpGGGa~e 354 (477)
+.|||+|||+|+.+++|++|+++||++++|+++++| +|||||++|
T Consensus 372 ----------------------------------~~~tI~lrG~te~~l~E~kr~l~DAl~~~r~av~~g~iVpGGGa~e 417 (550)
T 3p9d_G 372 ----------------------------------KTCTLLLRGGAEQVIAEVERSLHDAIMIVKRALQNKLIVAGGGATE 417 (550)
T ss_dssp ----------------------------------CCCCCCBCSSSHHHHHHHHHHHHHHHHHHHHHHHSCCEEETTTHHH
T ss_pred ----------------------------------ceeEEEEeCCcHHHHHHHHHHHHhHHHHHHHHHhcCCcccCCCHHH
Confidence 579999999999999999999999999999999999 999999999
Q ss_pred HHHHHhhhhhhccCCchhHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHcc----CCceeEEcCCCcccccccCCc
Q 011794 355 VHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAGVEGEVVVEKVKDS----EWTTGYNAMTDKYENMLQAGV 430 (477)
Q Consensus 355 ~~~s~~L~~~~~~~~~~~~~~~i~~~a~AL~~ip~~L~~NaG~d~~~~l~~l~~~----~~~~G~d~~~g~i~d~~~~gI 430 (477)
++++++|++++.++++.+ |+++++|++||+.||++|++|||+|+.+++++|++. ++++|||+.+|++.||++.||
T Consensus 418 ~~~s~~L~~~~~~~~g~e-q~~i~~~a~ALe~ip~~La~NaG~d~~~vv~~l~~~h~~~~~~~G~d~~~g~~~dm~~~gI 496 (550)
T 3p9d_G 418 MEVSKCLRDYSKTIAGKQ-QMIINAFAKALEVIPRQLCENAGFDAIEILNKLRLAHSKGEKWYGVVFETENIGDNFAKFV 496 (550)
T ss_dssp HHHHHHHHHHHHTCCSTT-HHHHHHHHHHHTHHHHHHHHTSCSCHHHHHHHHHHHHHHSCSCCCBCSSSSSBCCHHHHTC
T ss_pred HHHHHHHHHHhhcCChHH-HHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHhcCCCceeeeCCCCcccchHhccC
Confidence 999999999988888875 799999999999999999999999999999999873 568999999999999999999
Q ss_pred ccchHHHHHHHHHHHHHHHHHhchhhhhhcCCCCCCCC
Q 011794 431 IDPAKVTRCALQNAASVAGMVLTTQAIVVEKPKPKTPV 468 (477)
Q Consensus 431 ~dp~~vk~~al~~A~e~a~~lL~iD~iI~~~~~~~~~~ 468 (477)
|||+.||+++|+.|+|+|++|||||++|..+|+++.++
T Consensus 497 ~dp~~vk~~al~~A~~~a~~iL~id~ii~~~~~~~~~~ 534 (550)
T 3p9d_G 497 WEPALVKINALNSATEATNLILSVDETITNKGSESANA 534 (550)
T ss_dssp EEEHHHHHHHHHHHHHHHHHHHTEEEEECCCCCC----
T ss_pred EecHHHHHHHHHHHHHHHHHHHhHHHHhhCCCcccccC
Confidence 99999999999999999999999999999988876544
No 17
>3iyg_D T-complex protein 1 subunit delta; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=1.4e-83 Score=681.49 Aligned_cols=401 Identities=22% Similarity=0.298 Sum_probs=368.3
Q ss_pred CCChHHHHHHHHHHhhhhccCCCcchHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHhccccCC--CHHH
Q 011794 1 MENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIE--GRDD 78 (477)
Q Consensus 1 ~~hp~akll~~~a~~qd~~~GDGTTt~vvLa~~Ll~~~~~li~~gi~p~~I~~g~~~a~~~~~~~L~~~s~~~~--~~~~ 78 (477)
++||+|||++++|++||+++||||||+|+||++||+++.+++++|+||+.|++||++|++.++++|+++++|++ +++.
T Consensus 62 v~hP~akll~~~a~~qd~~~GDGTTtvvVLA~~Ll~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~~~~~ 141 (518)
T 3iyg_D 62 VLHPAARMLVELSKAQDIEAGDGTTSVVIIAGSLLDSCTKLLQKGIHPTIISESFQKALEKGIEILTDMSRPVELSDRET 141 (518)
T ss_pred cchHHHHHHHHHHHHhhhhhCCCceeHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHheeeCCCCChHH
Confidence 58999999999999999999999999999999999999999999999999999999999999999999999998 7899
Q ss_pred HHHHHHHhcCCc------hhHHHHHHHHHHHhCC---CCc-----ccc--cCCCccccceEEEEeeEEcccccCCCCccC
Q 011794 79 IKAVATISAGND------DLIGTMIADAIDKVGP---DGV-----LSI--ESSSSFETTVEVEEGMEIDRGYISPQFVTN 142 (477)
Q Consensus 79 l~~va~ts~~~~------~~~a~lv~~av~~v~~---~~~-----I~i--~~g~~~~ds~~~i~G~~~~~~~~~p~~~~~ 142 (477)
|.++|+||++++ +.|++++++|+.++++ +|. |++ ..|+++.|| ++++|++|+++|.| .
T Consensus 142 l~~vA~tsl~sK~~~~~~~~i~~livdAv~~V~~~~~~~~~d~~~I~V~k~~Gg~~~ds-~lv~G~~~dk~~~~-~---- 215 (518)
T 3iyg_D 142 LLNSAATSLNSKVVSQYSSLLSPMSVDAVMKVIDPATATSVDLRDIKIVKKLGGTIDDC-ELVEGLVLTQKVAN-S---- 215 (518)
T ss_pred HHHHhHhhhccccchhhHHHHHHHHHHHHHHhhccccCCCcccceEEEEEcCCCChhhh-eEeccEEEeccccc-C----
Confidence 999999999864 8999999999999985 454 554 378999998 99999999999987 2
Q ss_pred ccccchhccceeEEEecccc-------------CCHH-----------hHHHHHHHHHhcCCCEEEE-----eccccHHH
Q 011794 143 PEKLIVEFENARVLVTDQKI-------------SAIK-----------DIIPLLEKTTQLRAPLLII-----AEDVTGEA 193 (477)
Q Consensus 143 ~~~~~~~~~~~~Ill~~~~i-------------~~~~-----------~l~~~l~~i~~~~~~lvi~-----~~~i~~~a 193 (477)
||..++||||+++++++ ++++ ++.++++++.+.|+||||+ +++|++++
T Consensus 216 ---mp~~i~n~kIlll~~~Le~~k~~~~~~i~is~~~~~~~~~~~E~~~l~~~le~I~~~g~~lvi~~k~i~~~~I~~~A 292 (518)
T 3iyg_D 216 ---GITRVEKAKIGLIQFCLSAPKTDMDNQIVVSDYVQMDRVLREERAYILNLVKQIKKTGCNVLLIQKSILRDALSDLA 292 (518)
T ss_pred ---CCccccCceEEEEEeeccccccccCceEEecCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeccccccCcCHHH
Confidence 56678999999999875 3343 3578899999999999999 89999999
Q ss_pred HHHHHHhhhcccceEEEeeCCCcchhhhHHHHHHHHHhCceEecCCCCCcccCCCccCCccceEEEE---ec-ccEEEEe
Q 011794 194 LATLVVNKLRGILNVAAIKAPGFGERRKALLQDIAIVTGAEFQAGDLGLLIENTSVEQLGTARKVTI---RK-DSTTIIA 269 (477)
Q Consensus 194 l~~l~~n~~~~~~~v~av~~~~~~~~~~~~l~~ia~~tGa~~~~~~~~~~~~~~~~~~lG~~~~v~~---~~-~~~~~~~ 269 (477)
+++|.+++ |+||++++ +.+|+|||++|||++++ +++++++++||+|+.|++ ++ +++++|+
T Consensus 293 l~~L~~~~------I~av~~~~-----~~~le~ia~~tGa~ii~-----~l~~l~~~~LG~a~~v~~~~~g~~~~~~~~~ 356 (518)
T 3iyg_D 293 LHFLNKMK------IMVVKDIE-----REDIEFICKTIGTKPVA-----HVDQFTADMLGSAELAEEVSLNGSGKLIKIT 356 (518)
T ss_pred HHHHHHcC------cEEEecCC-----HHHHHHHHHHhCCEEec-----ccccCCHHHCCcCcEEEEEEeCCCceEEEEE
Confidence 99999986 58877664 67899999999999999 799999999999999986 34 6889999
Q ss_pred CCCChHHHHHHHHHHHHHHhhccchhhHHHHHHHHHHhcCCeEEEEecCCCHHHHHHHHHHHHHHHHHHHHHHHcC-CcC
Q 011794 270 DAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEG-IVP 348 (477)
Q Consensus 270 ~~~~~~~~~~~i~~l~~~l~~~~~~~~~~~l~~r~~~l~~~~~tI~v~G~t~~~~~e~~~~~~dal~~~~~~l~~g-vvp 348 (477)
+|++ .++.|||+|||+|+.+++|++|+++||++++|+++++| +||
T Consensus 357 g~~~----------------------------------~~~~~tI~lrG~te~~l~E~kr~l~DAl~~~r~av~~~~iVp 402 (518)
T 3iyg_D 357 GCAS----------------------------------PGKTVTIVVRGSNKLVIEEAERSIHDALCVIRCLVKKRALIA 402 (518)
T ss_pred CCCC----------------------------------CCceEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHhCCCEee
Confidence 9865 14689999999999999999999999999999999999 999
Q ss_pred CCcHHHHHHHHhhhhhhccCCchhHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHc----cCCceeEEcCCCcccc
Q 011794 349 GGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAGVEGEVVVEKVKD----SEWTTGYNAMTDKYEN 424 (477)
Q Consensus 349 GGGa~e~~~s~~L~~~~~~~~~~~~~~~i~~~a~AL~~ip~~L~~NaG~d~~~~l~~l~~----~~~~~G~d~~~g~i~d 424 (477)
|||++|++|+++|++++.+.++.+ |+++++|++||+.||++|++|||+|+.+++++|++ +++++|||+.+|++.|
T Consensus 403 GGGa~e~~~~~~L~~~~~~~~g~~-q~~i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~G~d~~~g~~~d 481 (518)
T 3iyg_D 403 GGGAPEIELALRLTEYSRTLSGME-SYCIRAFADAMEVIPSTLAENAGLNPISTVTELRNRHAQGEKTTGINVRKGGISN 481 (518)
T ss_pred cCcHHHHHHHHHHHHHhhcCChHH-HHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHhccCCceeEeCCCCcccc
Confidence 999999999999999988877765 79999999999999999999999999999999998 4668999999999999
Q ss_pred cccCCcccchHHHHHHHHHHHHHHHHHhchhhhhhcC
Q 011794 425 MLQAGVIDPAKVTRCALQNAASVAGMVLTTQAIVVEK 461 (477)
Q Consensus 425 ~~~~gI~dp~~vk~~al~~A~e~a~~lL~iD~iI~~~ 461 (477)
|++.|||||+.+|+++|+.|+|+|++|||||+||+.+
T Consensus 482 ~~~~gI~dp~~vk~~al~~A~e~a~~iL~iD~ii~~~ 518 (518)
T 3iyg_D 482 ILEELVVQPLLVSVSALTLATETVRSILKIDDVVNTR 518 (518)
T ss_pred hhhccCEEcHHHHHHHHHHHHHHHHHHHhhcceEecC
Confidence 9999999999999999999999999999999999764
No 18
>3iyg_G T-complex protein 1 subunit gamma; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=2.1e-83 Score=679.58 Aligned_cols=401 Identities=21% Similarity=0.305 Sum_probs=366.9
Q ss_pred CCChHHHHHHHHHHhhhhccCCCcchHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHhccccCC--CHHH
Q 011794 1 MENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIE--GRDD 78 (477)
Q Consensus 1 ~~hp~akll~~~a~~qd~~~GDGTTt~vvLa~~Ll~~~~~li~~gi~p~~I~~g~~~a~~~~~~~L~~~s~~~~--~~~~ 78 (477)
++||+|||++++|++||+++||||||+|+||++||+++.+++++|+||+.|++||++|++.++++|+++++|++ +++.
T Consensus 60 v~hP~Akll~e~a~~qd~e~GDGTTtvvvLAgeLL~~a~~ll~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~~~~~ 139 (515)
T 3iyg_G 60 VQHPAAKSMIEISRTQDEEVGDGTTSVIILAGEMLSVAEHFLEQQMHPTVVISAYRKALDDMISTLKKISIPVDTSNRDT 139 (515)
T ss_pred cCCHHHHHHHHHHHHhhhhhCCChhhHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhhcccCCCCHHH
Confidence 58999999999999999999999999999999999999999999999999999999999999999999999987 4789
Q ss_pred HHHHHHHhcCC------chhHHHHHHHHHHHhCCC--C--------cccc--cCCCccccceEEEEeeEEcccccCCCCc
Q 011794 79 IKAVATISAGN------DDLIGTMIADAIDKVGPD--G--------VLSI--ESSSSFETTVEVEEGMEIDRGYISPQFV 140 (477)
Q Consensus 79 l~~va~ts~~~------~~~~a~lv~~av~~v~~~--~--------~I~i--~~g~~~~ds~~~i~G~~~~~~~~~p~~~ 140 (477)
|.++|+||+++ .+.+++++++|+..+.++ + +|++ .+|++++|| ++++|++|+++|.||.
T Consensus 140 l~~va~tsl~sK~i~~~~~~~~~i~vdav~~V~~~~~~~~~~dl~~~I~I~ki~Ggs~~ds-~lv~G~v~dk~~~~~~-- 216 (515)
T 3iyg_G 140 MLNIINSSITTKVISRWSSLACNIALDAVKTVQFEENGRKEIDIKKYARVEKIPGGIIEDS-CVLRGVMINKDVTHPR-- 216 (515)
T ss_pred HHHHHHHHhcCCchhhHHHHHHHHHHHHHHhcccccCCCcccchhheeEEEEecCCCcccc-eEEeeEEEeCCCCCCC--
Confidence 99999999863 467789999999988632 2 1333 589999999 9999999999999984
Q ss_pred cCccccchhccceeEEEeccc-------------cCCHHhHHHHHH-----------HHHhcCCCEEEEeccccHHHHHH
Q 011794 141 TNPEKLIVEFENARVLVTDQK-------------ISAIKDIIPLLE-----------KTTQLRAPLLIIAEDVTGEALAT 196 (477)
Q Consensus 141 ~~~~~~~~~~~~~~Ill~~~~-------------i~~~~~l~~~l~-----------~i~~~~~~lvi~~~~i~~~al~~ 196 (477)
|+++++||||+++|++ +++++++.++++ ++.+.|++|||++++|++.++++
T Consensus 217 -----m~~~ien~kIll~~~~Le~~k~e~~~~v~is~~~~l~~~l~~E~~~l~~~v~kI~~~g~~vIi~~~~I~~~al~~ 291 (515)
T 3iyg_G 217 -----MRRYIKNPRIVLLDSSLEYKKGESQTDIEITREEDFTRILQMEEEYIQQLCEDIIQLKPDVVITEKGISDLAQHY 291 (515)
T ss_pred -----CcceeeeeEEEEEcccccccccccCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhCCCCEEEECCccCHHHHHH
Confidence 6789999999999994 567777776665 89999999999999999999999
Q ss_pred HHHhhhcccceEEEeeCCCcchhhhHHHHHHHHHhCceEecCCCCCcccCCCccCCcc-ceEEEE---ecccEEEEeCCC
Q 011794 197 LVVNKLRGILNVAAIKAPGFGERRKALLQDIAIVTGAEFQAGDLGLLIENTSVEQLGT-ARKVTI---RKDSTTIIADAA 272 (477)
Q Consensus 197 l~~n~~~~~~~v~av~~~~~~~~~~~~l~~ia~~tGa~~~~~~~~~~~~~~~~~~lG~-~~~v~~---~~~~~~~~~~~~ 272 (477)
|.++++ +| ++++++++|+|||++|||++++ +++++++++||+ |+.|++ ++++|+||++|+
T Consensus 292 L~~~~I------~a-----v~~~~k~~leria~~tGa~ii~-----~l~~l~~~~LG~~a~~v~~~~~g~~~~~~i~g~~ 355 (515)
T 3iyg_G 292 LMRANI------TA-----IRRVRKTDNNRIARACGARIVS-----RPEELREEDVGTGAGLLEIKKIGDEYFTFITECK 355 (515)
T ss_pred HHHCCc------ee-----eccCCHHHHHHHHHHhCCeeec-----cccccChhhcCCcccEEEEEEECCceEEEEeCCC
Confidence 998763 55 4788999999999999999999 899999999999 999986 466899999998
Q ss_pred ChHHHHHHHHHHHHHHhhccchhhHHHHHHHHHHhcCCeEEEEecCCCHHHHHHHHHHHHHHHHHHHHHHHcC-CcCCCc
Q 011794 273 SKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEG-IVPGGG 351 (477)
Q Consensus 273 ~~~~~~~~i~~l~~~l~~~~~~~~~~~l~~r~~~l~~~~~tI~v~G~t~~~~~e~~~~~~dal~~~~~~l~~g-vvpGGG 351 (477)
++ +.|||+|||+|+++++|.+|+++||++++|++++++ +|||||
T Consensus 356 ~~-----------------------------------~~~TIllrG~t~~~l~E~er~i~Dal~~~r~~~~~~~ivpGGG 400 (515)
T 3iyg_G 356 DP-----------------------------------KACTILLRGASKEILSEVERNLQDAMQVCRNVLLDPQLVPGGG 400 (515)
T ss_pred CC-----------------------------------CeEEEEEcCCCHHHHHHHHHHHHHHHHHHHHHhhCCcEEeCCC
Confidence 74 479999999999999999999999999999999877 999999
Q ss_pred HHHHHHHHhhhhhhccCCchhHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHcc-----CCceeEEcCCCcccccc
Q 011794 352 AALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAGVEGEVVVEKVKDS-----EWTTGYNAMTDKYENML 426 (477)
Q Consensus 352 a~e~~~s~~L~~~~~~~~~~~~~~~i~~~a~AL~~ip~~L~~NaG~d~~~~l~~l~~~-----~~~~G~d~~~g~i~d~~ 426 (477)
++|++++++|++++.+.++.+ |+++++|++||+.||++||+|||+|+.+++++|++. ++++|+|+.+|++.||+
T Consensus 401 a~e~~~~~~L~~~~~~~~g~e-q~~i~~~a~Ale~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~~G~d~~~g~~~d~~ 479 (515)
T 3iyg_G 401 ASEMAVAHALTEKSKAMTGVE-QWPYRAVAQALEVIPRTLIQNCGASTIRLLTSLRAKHTQENCETWGVNGETGTLVDMK 479 (515)
T ss_pred HHHHHHHHHHHHHhhccCcHH-HHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHhcCCCceeeeCCCCcccccH
Confidence 999999999999998888876 799999999999999999999999999999999973 35789999999999999
Q ss_pred cCCcccchHHHHHHHHHHHHHHHHHhchhhhhhcC
Q 011794 427 QAGVIDPAKVTRCALQNAASVAGMVLTTQAIVVEK 461 (477)
Q Consensus 427 ~~gI~dp~~vk~~al~~A~e~a~~lL~iD~iI~~~ 461 (477)
+.|||||+.+|+++|+.|+|+|++|||||++|...
T Consensus 480 ~~gi~dp~~vk~~al~~A~e~a~~iL~iD~ii~~~ 514 (515)
T 3iyg_G 480 ELGIWEPLAVKLQTYKTAVETAVLLLRIDDIVSGH 514 (515)
T ss_pred HcCCEEcHHHHHHHHHHHHHHHHHHHHHHheeecC
Confidence 99999999999999999999999999999999754
No 19
>3iyg_E T-complex protein 1 subunit; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=4e-83 Score=678.06 Aligned_cols=400 Identities=20% Similarity=0.290 Sum_probs=365.9
Q ss_pred CCChHHHHHHHHHHhhhhccCCCcchHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHhccccCC----CH
Q 011794 1 MENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIE----GR 76 (477)
Q Consensus 1 ~~hp~akll~~~a~~qd~~~GDGTTt~vvLa~~Ll~~~~~li~~gi~p~~I~~g~~~a~~~~~~~L~~~s~~~~----~~ 76 (477)
++||+|||++++|++||+++||||||+|+||++||+++.+++.+|+||+.|++||++|++.++++|+++++|++ ++
T Consensus 61 ~~hP~Akll~~~a~~qd~~~GDGTTtvvVLA~~Ll~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~~~~~ 140 (515)
T 3iyg_E 61 VDHQIAKLMVELSKSQDDEIGDGTTGVVVLAGALLEEAEQLLDRGIHPIRIADGYEQAARIAIEHLDKISDSVLVDMKNT 140 (515)
T ss_pred cCCHHHHHHHHHHHHhhhhhCCchhHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhceecCCCccCH
Confidence 58999999999999999999999999999999999999999999999999999999999999999999999875 36
Q ss_pred HHHHHHHHHhcCC------chhHHHHHHHHHHHhCCC-------Ccccc--cCCCccccceEEEEeeEEcccccCCCCcc
Q 011794 77 DDIKAVATISAGN------DDLIGTMIADAIDKVGPD-------GVLSI--ESSSSFETTVEVEEGMEIDRGYISPQFVT 141 (477)
Q Consensus 77 ~~l~~va~ts~~~------~~~~a~lv~~av~~v~~~-------~~I~i--~~g~~~~ds~~~i~G~~~~~~~~~p~~~~ 141 (477)
+.|.++|+||+++ .+.|++++++|+..+... ++|++ .+|+++.|| ++++|++|+++|.||+|
T Consensus 141 ~~l~~vA~tsl~sK~i~~~~~~l~~l~~dav~~V~~~~~~~~d~~~I~I~k~~Ggs~~ds-~lv~G~~~dk~~~~~~m-- 217 (515)
T 3iyg_E 141 EPLIQTAKTTLGSKVVNSCHRQMAEIAVNAVLTVADMQRRDVDFELIKVEGKVGGRLEDT-KLIKGVIVDKDFSHPQM-- 217 (515)
T ss_pred HHHHHHHHHHhcccchhHHHHHHHHHHHHHHHhhcccccCCCCcccEEEEEecCCCcccc-eEEeeEEEecccccccc--
Confidence 8999999999875 478999999999988652 23444 579999998 99999999999999975
Q ss_pred CccccchhccceeEEEeccc-------------cCCHHhH-----------HHHHHHHHhcCCCEEEEeccccHHHHHHH
Q 011794 142 NPEKLIVEFENARVLVTDQK-------------ISAIKDI-----------IPLLEKTTQLRAPLLIIAEDVTGEALATL 197 (477)
Q Consensus 142 ~~~~~~~~~~~~~Ill~~~~-------------i~~~~~l-----------~~~l~~i~~~~~~lvi~~~~i~~~al~~l 197 (477)
++.++||+|++++++ +++++++ .++++++.+.|+||||++++|+++++++|
T Consensus 218 -----~~~~~~~kIall~~~le~~k~~~~~~~~is~~~~l~~~~~~E~~~l~~~lekI~~~g~~vvi~~~~I~~~al~~L 292 (515)
T 3iyg_E 218 -----PKQVEDAKIAILTCPFEPPKPKTKHKLDVTSVEDFKALQKYEKEKFEEMIRQIKETGANLAVCQWGFDDEANHLL 292 (515)
T ss_pred -----cccCCCceEEEEcCccccccccccceeeeCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeCCCCHHHHHHH
Confidence 566789999999886 3455554 67899999999999999999999999999
Q ss_pred HHhhhcccceEEEeeCCCcchhhhHHHHHHHHHhCceEecCCCCCcccCCCccCCccceEEEE-----ecccEEEEeCCC
Q 011794 198 VVNKLRGILNVAAIKAPGFGERRKALLQDIAIVTGAEFQAGDLGLLIENTSVEQLGTARKVTI-----RKDSTTIIADAA 272 (477)
Q Consensus 198 ~~n~~~~~~~v~av~~~~~~~~~~~~l~~ia~~tGa~~~~~~~~~~~~~~~~~~lG~~~~v~~-----~~~~~~~~~~~~ 272 (477)
++|++ .++ +++++.+|+|||++|||++++ +++++++++||+|+.|++ ++++++||++|+
T Consensus 293 ~~~~I------~~v-----~~v~k~~le~ia~~tGa~ii~-----~l~~l~~~~LG~a~~v~~~~ig~~k~~~~~~~g~~ 356 (515)
T 3iyg_E 293 LQNDL------PAV-----RWVGGPEIELIAIATGGRIVP-----RFSELTAEKLGFAGLVKEISFGTTKDKMLVIEQCK 356 (515)
T ss_pred HHCCC------EEE-----eccCHHHHHHHHHHhCCEEec-----ccccCCHHHCCcceEEEEEEeccccceEEEEEcCC
Confidence 99986 444 456699999999999999999 899999999999999986 347999999998
Q ss_pred ChHHHHHHHHHHHHHHhhccchhhHHHHHHHHHHhcCCeEEEEecCCCHHHHHHHHHHHHHHHHHHHHHHHcC-CcCCCc
Q 011794 273 SKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEG-IVPGGG 351 (477)
Q Consensus 273 ~~~~~~~~i~~l~~~l~~~~~~~~~~~l~~r~~~l~~~~~tI~v~G~t~~~~~e~~~~~~dal~~~~~~l~~g-vvpGGG 351 (477)
++ +.+||+|||+|+.+++|++|+++||++++|+++++| +|||||
T Consensus 357 ~~-----------------------------------~~~tI~lrG~te~~l~E~kr~i~DAl~~~r~a~~~~~iVpGGG 401 (515)
T 3iyg_E 357 NS-----------------------------------RAVTIFIRGGNKMIIEEAKRSLHDALCVIRNLIRDNRVVYGGG 401 (515)
T ss_pred CC-----------------------------------ceEEEEEeCCcHHHHHHHHHHHHHHHHHHHHHHhcCCcCCCCc
Confidence 64 468999999999999999999999999999999999 999999
Q ss_pred HHHHHHHHhhhhhhccCCchhHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHc-----cCCceeEEcCCCcccccc
Q 011794 352 AALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAGVEGEVVVEKVKD-----SEWTTGYNAMTDKYENML 426 (477)
Q Consensus 352 a~e~~~s~~L~~~~~~~~~~~~~~~i~~~a~AL~~ip~~L~~NaG~d~~~~l~~l~~-----~~~~~G~d~~~g~i~d~~ 426 (477)
++|++++++|++++.+.++.+ |+++++|++||+.||++|++|||+|+.+++.+|++ +++++|||+.+|++.||+
T Consensus 402 a~e~~~~~~L~~~~~~~~g~~-q~~i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~~G~d~~~g~~~d~~ 480 (515)
T 3iyg_E 402 AAEISCALAVSQEADKCPTLE-QYAMRAFADALEVIPMALAENSGMNPIQTMTEVRARQVKEVNPALGIDCLHKGTNDMK 480 (515)
T ss_pred HHHHHHHHHHHHHhccCCcHH-HHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHhccCCCeeeEecCCCcccchH
Confidence 999999999999998888875 79999999999999999999999999999999987 356899999999999999
Q ss_pred cCCcccchHHHHHHHHHHHHHHHHHhchhhhhhc
Q 011794 427 QAGVIDPAKVTRCALQNAASVAGMVLTTQAIVVE 460 (477)
Q Consensus 427 ~~gI~dp~~vk~~al~~A~e~a~~lL~iD~iI~~ 460 (477)
+.|||||+.||+++|+.|+|+|++|||||++|+.
T Consensus 481 ~~gI~dp~~vk~~al~~A~~~a~~iL~iD~ii~~ 514 (515)
T 3iyg_E 481 HQHVIETLIGKKQQISLATQMVRMILKIDDIRKP 514 (515)
T ss_pred hccCEEcHHHHHHHHHHHHHHHHHHHhHHHhhcC
Confidence 9999999999999999999999999999999975
No 20
>3p9d_D T-complex protein 1 subunit delta; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_d* 4d8q_D* 4d8r_d*
Probab=100.00 E-value=7.4e-85 Score=692.07 Aligned_cols=405 Identities=17% Similarity=0.260 Sum_probs=371.5
Q ss_pred CCChHHHHHHHHHHhhhhccCCCcchHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHhccccCC--CHHH
Q 011794 1 MENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIE--GRDD 78 (477)
Q Consensus 1 ~~hp~akll~~~a~~qd~~~GDGTTt~vvLa~~Ll~~~~~li~~gi~p~~I~~g~~~a~~~~~~~L~~~s~~~~--~~~~ 78 (477)
++||+|+|++++|++||+++||||||+|||+++||+++.+++++|+||+.|++||++|++.++++|+++++|++ +++.
T Consensus 70 v~hP~akll~e~a~~qd~e~GDGTTtvvVLA~~Ll~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~~~e~ 149 (528)
T 3p9d_D 70 ILHPVARMLVEVSAAQDSEAGDGTTSVVILTGALLGAAERLLNKGIHPTIIADSFQSAAKRSVDILLEMCHKVSLSDREQ 149 (528)
T ss_dssp CCCTTHHHHHHHHHHHHHHTCSCSHHHHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHTTCCCCCSCCHHH
T ss_pred cCCHHHHHHHHHHHHhhhhhCCChhhHHHHHHHHHHHHHHHHHCCCChHHHHHHHHHHHHHHHHHHHHhhCCCCCCCHHH
Confidence 58999999999999999999999999999999999999999999999999999999999999999999999998 7899
Q ss_pred HHHHHHHhcCC------chhHHHHHHHHHHHhCC--CCcccc-------cCCCccccceEEEEeeEEcccccCCCCccCc
Q 011794 79 IKAVATISAGN------DDLIGTMIADAIDKVGP--DGVLSI-------ESSSSFETTVEVEEGMEIDRGYISPQFVTNP 143 (477)
Q Consensus 79 l~~va~ts~~~------~~~~a~lv~~av~~v~~--~~~I~i-------~~g~~~~ds~~~i~G~~~~~~~~~p~~~~~~ 143 (477)
|.++|+||+++ +++|++++++|+.++++ +|.|.+ .+|++++|| ++++|++|+++|.||+|
T Consensus 150 l~~va~tsl~sK~~~~~~~~i~~livdAv~~V~~~~~~~i~v~~I~I~k~~Gg~~~ds-~lv~G~v~dk~~~~~~~---- 224 (528)
T 3p9d_D 150 LVRAASTSLSSKIVSQYSSFLAPLAVDSVLKISDENSKNVDLNDIRLVKKVGGTIDDT-EMIDGVVLTQTAIKSAG---- 224 (528)
T ss_dssp HHHHHHHHSCSSSCSTTHHHHHHHHHHHHHTTCCTTTTCCCGGGSBCCCCCSSCSCCC-EEESSCBCCCCCCCSSS----
T ss_pred HHHHHHHHhcCCccchhHHHHHHHHHHHHHHhccccCCccceEEEEEEEecCCCccce-EEEeeeEEeecccCccc----
Confidence 99999999874 69999999999999987 454332 359999998 99999999999999985
Q ss_pred cccchhccceeEEEeccccC-------------CHHh-----------HHHHHHHHHhcCCCEEEEeccc-----cHHHH
Q 011794 144 EKLIVEFENARVLVTDQKIS-------------AIKD-----------IIPLLEKTTQLRAPLLIIAEDV-----TGEAL 194 (477)
Q Consensus 144 ~~~~~~~~~~~Ill~~~~i~-------------~~~~-----------l~~~l~~i~~~~~~lvi~~~~i-----~~~al 194 (477)
|++.++||||+++|++|+ ++++ +.++++++.+.|+||||++++| ++.++
T Consensus 225 --m~~~ien~kIll~~~~le~~k~~~~~~i~i~~~~~~~~~~~~E~~~l~~~le~I~~~g~~vvi~~~~I~~~a~~~~al 302 (528)
T 3p9d_D 225 --GPTRKEKAKIGLIQFQISPPKPDTENNIIVNDYRQMDKILKEERAYLLNICKKIKKAKCNVLLIQKSILRDAVNDLAL 302 (528)
T ss_dssp --CCSEESSEEEEEECCCSSCCCCSSEEEEEESSSSHHHHHTHHHHHHHHHHHHHHHHTTCCEEEESSCSCTTSCSCHHH
T ss_pred --CcccccCceEEEEeccccccccccCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeCCcccccCCHHHH
Confidence 788999999999999865 4443 6788999999999999999999 99999
Q ss_pred HHHHHhhhcccceEEEeeCCCcchhhhHHHHHHHHHhCceEecCCCCCcccCCCccCCccceEEEE---ecccEEEEeCC
Q 011794 195 ATLVVNKLRGILNVAAIKAPGFGERRKALLQDIAIVTGAEFQAGDLGLLIENTSVEQLGTARKVTI---RKDSTTIIADA 271 (477)
Q Consensus 195 ~~l~~n~~~~~~~v~av~~~~~~~~~~~~l~~ia~~tGa~~~~~~~~~~~~~~~~~~lG~~~~v~~---~~~~~~~~~~~ 271 (477)
++|.+++ |+||+ ++++.+|+|||++|||++++ +++++++++||+|+.|++ +++++++|++|
T Consensus 303 ~~L~~~~------I~av~-----~~~k~~le~ia~~tGa~ii~-----~~~~l~~~~LG~a~~v~~~~ig~~~~~~i~g~ 366 (528)
T 3p9d_D 303 HFLSKLN------IMVVK-----DIEREEIEFLSKGLGCKPIA-----DIELFTEDRLDSADLVEEIDSDGSKIVRVTGI 366 (528)
T ss_dssp HHHTTTS------CCEEE-----CCCTHHHHHHHHHHTCCCCS-----CSTTCCSSSEEEESCEECCEETTEECCBCTTB
T ss_pred HHHHHcC------cEEEE-----eCCHHHHHHHHHHHCCEEec-----ccccCCHHHCCcccEEEEEEECCEEEEEEEcc
Confidence 9999886 46654 66799999999999999999 789999999999999985 46688999988
Q ss_pred CChHHHHHHHHHHHHHHhhccchhhHHHHHHHHHHhcCCeEEEEecCCCHHHHHHHHHHHHHHHHHHHHHHHcC-CcCCC
Q 011794 272 ASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEG-IVPGG 350 (477)
Q Consensus 272 ~~~~~~~~~i~~l~~~l~~~~~~~~~~~l~~r~~~l~~~~~tI~v~G~t~~~~~e~~~~~~dal~~~~~~l~~g-vvpGG 350 (477)
.+.. .++.|||+|||+|+.+++|++|+++||++++|+++++| +||||
T Consensus 367 ~~~~--------------------------------~~~~~tI~lrG~te~~l~E~kr~i~DAl~~~r~av~~~~iVpGG 414 (528)
T 3p9d_D 367 RNNN--------------------------------ARPTVSVVIRGANNMIIDETERSLHDALCVIRCLVKERGLIAGG 414 (528)
T ss_dssp CCGG--------------------------------GCCCCEEECCCSSTTHHHHHHHHHTTTHHHHHHHHHSSCEEETT
T ss_pred cccC--------------------------------CCceEEEEEcCCCHHHHHHHHHHHHHHHHHHHHHHhcCCccCCC
Confidence 6310 15789999999999999999999999999999999999 99999
Q ss_pred cHHHHHHHHhhhhhhccCCchhHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHcc----CCceeEEcCCCcccccc
Q 011794 351 GAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAGVEGEVVVEKVKDS----EWTTGYNAMTDKYENML 426 (477)
Q Consensus 351 Ga~e~~~s~~L~~~~~~~~~~~~~~~i~~~a~AL~~ip~~L~~NaG~d~~~~l~~l~~~----~~~~G~d~~~g~i~d~~ 426 (477)
|++|++|+++|++++.+.++.+ |+++++|++||+.||++||+|||+|+.+++++|++. ++++|||+.+|++.||+
T Consensus 415 Ga~e~~~s~~L~~~~~~~~g~e-q~~i~~~a~ALe~ip~~La~NaG~d~~~vv~~l~~~h~~~~~~~G~d~~~g~~~dm~ 493 (528)
T 3p9d_D 415 GAPEIEISRRLSKEARSMEGVQ-AFIWQEFASALEVIPTTLAENAGLNSIKVVTELRSKHENGELNDGISVRRSGTTNTY 493 (528)
T ss_dssp THHHHHHHHHHHHCCTTSCHHH-HTTHHHHHHHHTHHHHHHHHTTSSCHHHHHHHHTTCCCSSSCCCCCCSSSSSCCCHH
T ss_pred CHHHHHHHHHHHHHhhccChHH-HHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHhccCCccceecCCCCccchH
Confidence 9999999999999988777765 799999999999999999999999999999999984 47899999999999999
Q ss_pred cCCcccchHHHHHHHHHHHHHHHHHhchhhhhhcC
Q 011794 427 QAGVIDPAKVTRCALQNAASVAGMVLTTQAIVVEK 461 (477)
Q Consensus 427 ~~gI~dp~~vk~~al~~A~e~a~~lL~iD~iI~~~ 461 (477)
+.|||||+.||+++|+.|+|+|++|||||+||+.+
T Consensus 494 ~~gI~dp~~vk~~al~~A~e~a~~iL~iD~ii~~~ 528 (528)
T 3p9d_D 494 EEHILQPVLVSTSAITLASECVKSILRIDDIAFSR 528 (528)
T ss_dssp HHCCEEEHHHHHHHHHHHHHHHHHHHHCSCCCBCC
T ss_pred hccCeecHHHHHHHHHHHHHHHHHHHhhhHheecC
Confidence 99999999999999999999999999999999764
No 21
>3p9d_B T-complex protein 1 subunit beta; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_b* 4d8q_B* 4d8r_b*
Probab=100.00 E-value=2e-84 Score=689.70 Aligned_cols=408 Identities=19% Similarity=0.314 Sum_probs=368.2
Q ss_pred CCChHHHHHHHHHHhhhhccCCCcchHHHHHHHHHHHHHHHHhC-CCChHHHHHHHHHHHHHHHHHHHhccccCCC----
Q 011794 1 MENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTS-GANPVSLKRGIDKTVHGLVEELEKRARPIEG---- 75 (477)
Q Consensus 1 ~~hp~akll~~~a~~qd~~~GDGTTt~vvLa~~Ll~~~~~li~~-gi~p~~I~~g~~~a~~~~~~~L~~~s~~~~~---- 75 (477)
++||+|||++++|++||+++||||||+||||++||+++.+++.+ |+||+.|++||++|++.++++|+++++++++
T Consensus 69 ~~hP~Akll~e~a~~qd~~~GDGTTtavVLA~~Ll~ea~~lv~~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~~~~ 148 (527)
T 3p9d_B 69 LDNPAAKVLVNISKVQDDEVGDGTTSVTVLSAELLREAEKLIDQSKIHPQTIIEGYRLASAAALDALTKAAVDNSHDKTM 148 (527)
T ss_dssp CCCHHHHHHHHHHHHHHHHTCSCTTTTTHHHHHHHHHHHHHTC---CCHHHHHHHHHHHHHHHHHHHHHTCBCCCCCHHH
T ss_pred cCCHHHHHHHHHHHHhHhhhCCcHhHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHhCccCCCcchh
Confidence 58999999999999999999999999999999999999999999 9999999999999999999999999999985
Q ss_pred -HHHHHHHHHHhcCC------chhHHHHHHHHHHHhCCCC---ccccc--CCCccccceEEEEeeEEcccccCCCCccCc
Q 011794 76 -RDDIKAVATISAGN------DDLIGTMIADAIDKVGPDG---VLSIE--SSSSFETTVEVEEGMEIDRGYISPQFVTNP 143 (477)
Q Consensus 76 -~~~l~~va~ts~~~------~~~~a~lv~~av~~v~~~~---~I~i~--~g~~~~ds~~~i~G~~~~~~~~~p~~~~~~ 143 (477)
++.|.++|+||+++ ++.|++++++|+.++++++ +|+++ .|+++.|| ++++|++|+++|.||+
T Consensus 149 ~~~~l~~vA~tSl~sK~~~~~~~~i~~li~dAv~~V~~~~~~~~I~V~k~~gg~~~ds-~lv~G~~~dk~~~~~~----- 222 (527)
T 3p9d_B 149 FREDLIHIAKTTLSSKILSQDKDHFAELATNAILRLKGSTNLEHIQIIKILGGKLSDS-FLDEGFILAKKFGNNQ----- 222 (527)
T ss_dssp HHHHHHHHHHHHHTTSGGGGGHHHHHHHHHHHHHTTCTTCCTTSSCCCBCCCSSSSCC-CEESSCCCSCCCSSSC-----
T ss_pred hHHHHHHHHHhccccCcccchHHHHHHHHHHHHHHhcccCCcceEEEEEcCCCCcccc-EEEEeEEEecccCCCC-----
Confidence 78999999999975 6899999999999999887 67664 69999998 9999999999999985
Q ss_pred cccchhccceeEEEecccc--------------CCHHhH-----------HHHHHHHHhcCCCEEEEeccccHHHHHHHH
Q 011794 144 EKLIVEFENARVLVTDQKI--------------SAIKDI-----------IPLLEKTTQLRAPLLIIAEDVTGEALATLV 198 (477)
Q Consensus 144 ~~~~~~~~~~~Ill~~~~i--------------~~~~~l-----------~~~l~~i~~~~~~lvi~~~~i~~~al~~l~ 198 (477)
|..++||+|+++++++ ++++++ +++++++.++|+||||++++|++.++++|.
T Consensus 223 ---p~~~~n~kIlll~~~le~~k~~~~~~~v~i~~~~~l~~~~~~E~~~l~~~l~~I~~~g~~vvi~~~~I~~~al~~L~ 299 (527)
T 3p9d_B 223 ---PKRIENAKILIANTTLDTDKVKIFGTKFKVDSTAKLAQLEKAEREKMKNKIAKISKFGINTFINRQLIYDYPEQLFT 299 (527)
T ss_dssp ---CSCCSSCEEEEECSCSSCCCCSSCCCBCCCCHHHHHHHHHHHHHHHHHHHHHHHTTTCCBEEESSCCCTTTHHHHHH
T ss_pred ---CeeeecceEEEeccccccccccccCceEEEcCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEECCCCCHHHHHHHH
Confidence 3467899999998863 344444 578899999999999999999999999999
Q ss_pred HhhhcccceEEEeeCCCcchhhhHHHHHHHHHhCceEecCCCCCcccCCCccCCccceEEE---EecccEEEEeCCCChH
Q 011794 199 VNKLRGILNVAAIKAPGFGERRKALLQDIAIVTGAEFQAGDLGLLIENTSVEQLGTARKVT---IRKDSTTIIADAASKD 275 (477)
Q Consensus 199 ~n~~~~~~~v~av~~~~~~~~~~~~l~~ia~~tGa~~~~~~~~~~~~~~~~~~lG~~~~v~---~~~~~~~~~~~~~~~~ 275 (477)
+++ |++|+ ++++.+|+|||++|||++++ +++++++++||+|+.|+ ++++++++|.+|++
T Consensus 300 ~~~------i~av~-----~~~~~dle~ia~~tGa~iv~-----~~~~~~~~~LG~a~~v~~~~ig~~~~~~~~g~~~-- 361 (527)
T 3p9d_B 300 DLG------INSIE-----HADFEGVERLALVTGGEVVS-----TFDEPSKCKLGECDVIEEIMLGEQPFLKFSGCKA-- 361 (527)
T ss_dssp HTC------BCCCC-----CCHHHHHHHHHHHTCCCCCS-----TTSCCTTSCEECSBCCBCCCSSSCCBCCBCSSCC--
T ss_pred HCC------CEEEe-----cCCHHHHHHHHHHhCCEEec-----chhhCCHHHCCCCcEEEEEEecceEEEEEECCCC--
Confidence 987 46554 55688999999999999999 78999999999999998 56889999999875
Q ss_pred HHHHHHHHHHHHHhhccchhhHHHHHHHHHHhcCCeEEEEecCCCHHHHHHHHHHHHHHHHHHHHHHHcC-CcCCCcHHH
Q 011794 276 EIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEG-IVPGGGAAL 354 (477)
Q Consensus 276 ~~~~~i~~l~~~l~~~~~~~~~~~l~~r~~~l~~~~~tI~v~G~t~~~~~e~~~~~~dal~~~~~~l~~g-vvpGGGa~e 354 (477)
+++|||+|||+|+.+++|++|+++||++++|+++++| +|||||++|
T Consensus 362 ---------------------------------~~~~tI~lrg~te~~l~E~kr~i~DAl~~~r~av~~g~iVpGGGa~e 408 (527)
T 3p9d_B 362 ---------------------------------GEACTIVLRGATDQTLDEAERSLHDALSVLSQTTKETRTVLGGGCAE 408 (527)
T ss_dssp ---------------------------------SCCEECBCCTTCTTHHHHHHTHHHHHHHHHHHHHHCCCEEETTTHHH
T ss_pred ---------------------------------CCEEEEEEcCCCHHHHHHHHHHHHHHHHHHHHHHhcCCcccCCcHHH
Confidence 4689999999999999999999999999999999999 999999999
Q ss_pred HHHHHhhhhhhccCCchhHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHcc----CCceeEEcCCCcccccccCCc
Q 011794 355 VHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAGVEGEVVVEKVKDS----EWTTGYNAMTDKYENMLQAGV 430 (477)
Q Consensus 355 ~~~s~~L~~~~~~~~~~~~~~~i~~~a~AL~~ip~~L~~NaG~d~~~~l~~l~~~----~~~~G~d~~~g~i~d~~~~gI 430 (477)
++++++|++++.+.++.+ |+++++|++||+.||++|++|||+|+.+++++|++. ++++|||+.+|++.||++.||
T Consensus 409 ~~~s~~L~~~~~~~~g~e-q~~i~~~a~ALe~ip~~La~NaG~d~~~vv~~l~~~h~~~~~~~G~d~~~g~~~dm~~~gI 487 (527)
T 3p9d_B 409 MVMSKAVDTEAQNIDGKK-SLAVEAFARALRQLPTILADNAGFDSSELVSKLRSSIYNGISTSGLDLNNGTIADMRQLGI 487 (527)
T ss_dssp HHHHHHHHHHHHHHCSHH-HHHHHHHHHHHHHHHHHHHHHHTSCSHHHHHHHHHHHHHTCSCCCCCSSSTTCCCHHHHTC
T ss_pred HHHHHHHHHHHhccCcHH-HHHHHHHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHhcCCCceeEECCCCCCcchHhccC
Confidence 999999999987777765 799999999999999999999999999999999874 568999999999999999999
Q ss_pred ccchHHHHHHHHHHHHHHHHHhchhhhhhcCCCCCCCCC
Q 011794 431 IDPAKVTRCALQNAASVAGMVLTTQAIVVEKPKPKTPVA 469 (477)
Q Consensus 431 ~dp~~vk~~al~~A~e~a~~lL~iD~iI~~~~~~~~~~~ 469 (477)
|||+.||+++|+.|+|+|++|||||++|..+|+++.++|
T Consensus 488 ~dp~~vk~~al~~A~e~a~~iL~id~ii~~~~~~~~~~~ 526 (527)
T 3p9d_B 488 VESYKLKRAVVSSASEAAEVLLRVDNIIRARPRTANRQH 526 (527)
T ss_dssp EEETTHHHHHHHHHHHHHHHHHHCCEEEEEC--------
T ss_pred EEcHHHHHHHHHHHHHHHHHHHhHHHHHhcCCcccCCCC
Confidence 999999999999999999999999999999988766554
No 22
>3iyg_Q T-complex protein 1 subunit theta; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=5.5e-82 Score=668.85 Aligned_cols=400 Identities=19% Similarity=0.294 Sum_probs=363.7
Q ss_pred CCChHHHHHHHHHHhhhhccCCCcchHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHhc----cccCCCH
Q 011794 1 MENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKR----ARPIEGR 76 (477)
Q Consensus 1 ~~hp~akll~~~a~~qd~~~GDGTTt~vvLa~~Ll~~~~~li~~gi~p~~I~~g~~~a~~~~~~~L~~~----s~~~~~~ 76 (477)
++||+|||++++|++||+++||||||+|+|+++||+++.+++++|+||+.|++||++|++.++++|+++ +.+++++
T Consensus 62 v~hP~Akll~e~a~~qd~~~GDGTTtvvVLA~~Ll~~a~~lv~~GihP~~I~~G~~~A~~~a~~~L~~~~~~~~~~~~~~ 141 (512)
T 3iyg_Q 62 VQHPAAKMIVMASHMQEQEVGDGTNFVLVFAGALLELAEELLRLGLSVSEVIEGYEIACKKAHEILPDLVCCSAKNLRDV 141 (512)
T ss_pred cCCHHHHHHHHHHHHhhhhhCCChhHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCH
Confidence 589999999999999999999999999999999999999999999999999999999999999999998 5677789
Q ss_pred HHHHHHHHHhcCC-----chhHHHHHHHHHHHhCCC-Ccccc-------cCCCccccceEEEEeeEEcccccCCCCccCc
Q 011794 77 DDIKAVATISAGN-----DDLIGTMIADAIDKVGPD-GVLSI-------ESSSSFETTVEVEEGMEIDRGYISPQFVTNP 143 (477)
Q Consensus 77 ~~l~~va~ts~~~-----~~~~a~lv~~av~~v~~~-~~I~i-------~~g~~~~ds~~~i~G~~~~~~~~~p~~~~~~ 143 (477)
+.|.++|+||+++ +++|++++++|+.+++++ +.|.+ ..|+++.|| ++++|++|+++|.+
T Consensus 142 ~~l~~va~tsl~sK~~~~~~~i~~livdAv~~V~~~~~~i~v~~I~i~k~~Ggs~~ds-~lv~G~~~dk~~~~------- 213 (512)
T 3iyg_Q 142 DEVSSLLHTSVMSKQYGNEVFLAKLIAQACVSIFPDSGHFNVDNIRVCKILGSGVHSS-SVLHGMVFKKETEG------- 213 (512)
T ss_pred HHHHHHHHHHhCCCCccchHHHHHHHHHHHHHHhccCCcccHhHeeEeeccCCCcccc-eEEeeEEEecCcCC-------
Confidence 9999999999976 789999999999999886 44433 369999998 99999999999865
Q ss_pred cccchhccceeEEEeccc-------------cCCHHhHHHH-------H----HHHHhcCCCEEEEeccccHHHHHHHHH
Q 011794 144 EKLIVEFENARVLVTDQK-------------ISAIKDIIPL-------L----EKTTQLRAPLLIIAEDVTGEALATLVV 199 (477)
Q Consensus 144 ~~~~~~~~~~~Ill~~~~-------------i~~~~~l~~~-------l----~~i~~~~~~lvi~~~~i~~~al~~l~~ 199 (477)
|++.++||+|++++++ +++++++.++ + +++.++|+||||++++|++.++++|.+
T Consensus 214 --~~~~~~n~kI~ll~~~le~~~~e~k~~v~Is~~~~l~~~~~~E~~~l~~~v~~I~~~g~~vvi~~~~I~~la~~~l~k 291 (512)
T 3iyg_Q 214 --DVTSVKDAKIAVYSCPFDGMITETKGTVLIKSAEELMNFSKGEENLMDAQVKAIADTGANVVVTGGRVADMALHYANK 291 (512)
T ss_pred --CCcccccCceEEEecccccccccccceEEeCCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEECCCccHHHHHHHHH
Confidence 4567889999999986 3456676554 4 488999999999999999999999987
Q ss_pred hhhcccceEEEeeCCCcchhhhHHHHHHHHHhCceEecCCCCCcccCCCccCCccceEEEE---ecccEEEEeCCCChHH
Q 011794 200 NKLRGILNVAAIKAPGFGERRKALLQDIAIVTGAEFQAGDLGLLIENTSVEQLGTARKVTI---RKDSTTIIADAASKDE 276 (477)
Q Consensus 200 n~~~~~~~v~av~~~~~~~~~~~~l~~ia~~tGa~~~~~~~~~~~~~~~~~~lG~~~~v~~---~~~~~~~~~~~~~~~~ 276 (477)
++ |+||+.++ +.+|+|||++|||++++ +++++++++||+|+.|++ +++++++|++|+.
T Consensus 292 ~~------I~av~~~~-----~~dle~ia~~tGa~iis-----~l~~~~~~~LG~a~~v~~~~~g~~~~~~~~~~~~--- 352 (512)
T 3iyg_Q 292 YN------IMLVRLNS-----KWDLRRLCKTVGATALP-----RLNPPVLEEMGHCDSVYLSEVGDTQVVVFKHEKE--- 352 (512)
T ss_pred CC------eEEEEeCC-----HHHHHHHHHHhCCEEec-----ccccCCHHHCCcccEEEEEEeCCeEEEEEEcccC---
Confidence 54 68887664 67899999999999999 899999999999999986 4668999998853
Q ss_pred HHHHHHHHHHHHhhccchhhHHHHHHHHHHhcCCeEEEEecCCCHHHHHHHHHHHHHHHHHHHHHHHcC-CcCCCcHHHH
Q 011794 277 IQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEG-IVPGGGAALV 355 (477)
Q Consensus 277 ~~~~i~~l~~~l~~~~~~~~~~~l~~r~~~l~~~~~tI~v~G~t~~~~~e~~~~~~dal~~~~~~l~~g-vvpGGGa~e~ 355 (477)
.+++|||+|||+|+.+++|++|+++||++++|+++++| +|||||++|+
T Consensus 353 -------------------------------~~~~~tI~lrG~te~~l~E~kr~i~DAl~~~r~a~~~~~iVpGGGa~e~ 401 (512)
T 3iyg_Q 353 -------------------------------DGAISTIVLRGSTDNLMDDIERAVDDGVNTFKVLTRDKRLVPGGGATEI 401 (512)
T ss_pred -------------------------------CCceEEEEECCCcHHHHHHHHHHHHHHHHHHHHHHhCCCEecCCcHHHH
Confidence 25789999999999999999999999999999999999 9999999999
Q ss_pred HHHHhhhhhhccCCchhHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHc----cCCceeEEcCCC--cccccccCC
Q 011794 356 HLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAGVEGEVVVEKVKD----SEWTTGYNAMTD--KYENMLQAG 429 (477)
Q Consensus 356 ~~s~~L~~~~~~~~~~~~~~~i~~~a~AL~~ip~~L~~NaG~d~~~~l~~l~~----~~~~~G~d~~~g--~i~d~~~~g 429 (477)
+++++|++++.+.++.+ |+++++|++||+.||++|++|||+|+.+++++|++ +++++|||+.+| ++.||++.|
T Consensus 402 ~~s~~L~~~~~~~~g~e-q~~i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~G~d~~~~~g~~~d~~~~g 480 (512)
T 3iyg_Q 402 ELAKQITSYGETCPGLE-QYAIKKFAEAFEAIPRALAENSGVKANEVISKLYAVHQEGNKNVGLDIEAEVPAVKDMLEAG 480 (512)
T ss_pred HHHHHHHHHhccCCcHH-HHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHhcCCCcEEEecCCCCCcccchHhcc
Confidence 99999999998888875 79999999999999999999999999999999987 367899999965 999999999
Q ss_pred cccchHHHHHHHHHHHHHHHHHhchhhhhhcC
Q 011794 430 VIDPAKVTRCALQNAASVAGMVLTTQAIVVEK 461 (477)
Q Consensus 430 I~dp~~vk~~al~~A~e~a~~lL~iD~iI~~~ 461 (477)
||||+.||+++|+.|+|+|++|||||++|+++
T Consensus 481 I~dp~~vk~~al~~A~~~a~~iL~id~ii~~k 512 (512)
T 3iyg_Q 481 VLDTYLGKYWAIKLATNAAVTVLRVDQIIMAK 512 (512)
T ss_pred CeEcHHHHHHHHHHHHHHHHHHHhHhHheecC
Confidence 99999999999999999999999999999753
No 23
>3p9d_E T-complex protein 1 subunit epsilon; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_e* 4d8q_E* 4d8r_e*
Probab=100.00 E-value=6.2e-83 Score=681.40 Aligned_cols=409 Identities=21% Similarity=0.285 Sum_probs=367.5
Q ss_pred CCChHHHHHHHHHHhhhhccCCCcchHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHhccccCCC-----
Q 011794 1 MENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEG----- 75 (477)
Q Consensus 1 ~~hp~akll~~~a~~qd~~~GDGTTt~vvLa~~Ll~~~~~li~~gi~p~~I~~g~~~a~~~~~~~L~~~s~~~~~----- 75 (477)
++||+|||++++|++||+++||||||+||||++||+++.+++++|+||+.|++||+.|++.++++|+++++|+++
T Consensus 96 v~hP~Akll~e~a~~qd~e~GDGTTtvvVLA~~LL~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~~~~~ 175 (562)
T 3p9d_E 96 LDNEIAKLLVQLSKSQDDEIGDGTTGVVVLASALLDQALELIQKGIHPIKIANGFDEAAKLAISKLEETCDDISASNDEL 175 (562)
T ss_dssp CCSHHHHHHHHHHHHHHHHTSSCTTHHHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHTTTTTSSSSBCCCSS
T ss_pred CCCHHHHHHHHHHHHHHhhcCCCcccHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhccCcCCCcchh
Confidence 589999999999999999999999999999999999999999999999999999999999999999999998863
Q ss_pred -HHHHHHHHHHhcCC------chhHHHHHHHHHHHhCCC-------Ccccc--cCCCccccceEEEEeeEEcccccCCCC
Q 011794 76 -RDDIKAVATISAGN------DDLIGTMIADAIDKVGPD-------GVLSI--ESSSSFETTVEVEEGMEIDRGYISPQF 139 (477)
Q Consensus 76 -~~~l~~va~ts~~~------~~~~a~lv~~av~~v~~~-------~~I~i--~~g~~~~ds~~~i~G~~~~~~~~~p~~ 139 (477)
++.|.++|+||+++ .+.|++++++|+..+... +.|++ .+|++++|| ++++|++|+++|.||+|
T Consensus 176 ~~e~L~~vA~tSl~sK~i~~~~d~la~l~vdAV~~V~~~~~~~~d~~~I~I~k~~Ggs~~ds-~lveGmv~dk~~~sp~m 254 (562)
T 3p9d_E 176 FRDFLLRAAKTSLGSKIVSKDHDRFAEMAVEAVINVMDKDRKDVDFDLIKMQGRVGGSISDS-KLINGVILDKDFSHPQM 254 (562)
T ss_dssp CHHHHHHHHHHHHSSSTTTTTHHHHHHHHHHHHHTSSTTTCSCCCCCCCEEEEESSSCGGGC-EEESSEEESSCCCTTSC
T ss_pred hHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHheeecccccCCCCcccEEEEEecCCChhhh-ceeeeEEEecCCCCCCc
Confidence 26899999999864 478999999999988652 23444 579999999 99999999999999998
Q ss_pred ccCccccchhccceeEEEecccc-------------CCHHh-----------HHHHHHHHHhcCCCEEEEeccccHHHHH
Q 011794 140 VTNPEKLIVEFENARVLVTDQKI-------------SAIKD-----------IIPLLEKTTQLRAPLLIIAEDVTGEALA 195 (477)
Q Consensus 140 ~~~~~~~~~~~~~~~Ill~~~~i-------------~~~~~-----------l~~~l~~i~~~~~~lvi~~~~i~~~al~ 195 (477)
.++.+ .+...+||+|+++++++ +++++ +.++++++.+.|+||||++++|++++++
T Consensus 255 ~~~~~-~~~~~~~~kIall~~~le~~k~~~~~~~~Iss~~~~~~~~~~E~~~l~~~lekI~~~g~~vvI~~~~I~~~Al~ 333 (562)
T 3p9d_E 255 PKCVL-PKEGSDGVKLAILTCPFEPPKPKTKHKLDISSVEEYQKLQTYEQDKFKEMIDDVKKAGADVVICQWGFDDEANH 333 (562)
T ss_dssp CC------TTCSSCEECEEESCCSSCCCSSCCCCCCCSSSHHHHHHHHHHHHHHHHHHHHHHHTCSCCEECSSCCSHHHH
T ss_pred Ccccc-cccccccceEEEecccccccccccCceEEECCHHHHHHHHHHHHHHHHHHHHHHHHcCCcEEEEeCCCCHHHHH
Confidence 54321 12334899999999873 34444 5688999999999999999999999999
Q ss_pred HHHHhhhcccceEEEeeCCCcchhhhHHHHHHHHHhCceEecCCCCCcccCCCccCCccceEEEE-----ecccEEEEeC
Q 011794 196 TLVVNKLRGILNVAAIKAPGFGERRKALLQDIAIVTGAEFQAGDLGLLIENTSVEQLGTARKVTI-----RKDSTTIIAD 270 (477)
Q Consensus 196 ~l~~n~~~~~~~v~av~~~~~~~~~~~~l~~ia~~tGa~~~~~~~~~~~~~~~~~~lG~~~~v~~-----~~~~~~~~~~ 270 (477)
+|++|++ .+ ++++++.+|+|||++|||++++ +++++++++||+|+.|++ ++++++||++
T Consensus 334 ~L~~~~I------~~-----v~~v~k~~le~ia~~TGa~iis-----~l~~l~~~~LG~a~~v~~~~ig~~~~~~~~i~g 397 (562)
T 3p9d_E 334 LLLQNDL------PA-----VRWVGGQELEHIAISTNGRIVP-----RFQDLSKDKLGTCSRIYEQEFGTTKDRMLIIEQ 397 (562)
T ss_dssp HHHTTTC------CC-----EECCCTTTHHHHHHHHCCCEEE-----SSSCCCTTSCEECSCEEEECCSSSSCCEEEECC
T ss_pred HHHHCCC------EE-----EeccCHHHHHHHHHHhCCEEEe-----ccccCCHHHCCcceEEEEEEeccCCceEEEEec
Confidence 9999986 33 3456789999999999999999 899999999999999997 3589999999
Q ss_pred CCChHHHHHHHHHHHHHHhhccchhhHHHHHHHHHHhcCCeEEEEecCCCHHHHHHHHHHHHHHHHHHHHHHHcC-CcCC
Q 011794 271 AASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEG-IVPG 349 (477)
Q Consensus 271 ~~~~~~~~~~i~~l~~~l~~~~~~~~~~~l~~r~~~l~~~~~tI~v~G~t~~~~~e~~~~~~dal~~~~~~l~~g-vvpG 349 (477)
|+++ +.+||+|||+|+.+++|++|+++||++++|+++++| +|||
T Consensus 398 ~~~~-----------------------------------~~~TIllrG~te~~l~E~kr~i~DAL~~~r~av~~g~iVpG 442 (562)
T 3p9d_E 398 SKET-----------------------------------KTVTCFVRGSNKMIVDEAERALHDSLCVVRNLVKDSRVVYG 442 (562)
T ss_dssp CSCC-----------------------------------SCCEEEEECTTTTTHHHHTHHHHHHHHHHHHHHHSCCEEET
T ss_pred CCCC-----------------------------------CeEEEEEeCCCHHHHHHHHHHHHHHHHHHHHHHhCCCcCCC
Confidence 9764 578999999999999999999999999999999999 9999
Q ss_pred CcHHHHHHHHhhhhhhccCCchhHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHc-----cCCceeEEcCCCcccc
Q 011794 350 GGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAGVEGEVVVEKVKD-----SEWTTGYNAMTDKYEN 424 (477)
Q Consensus 350 GGa~e~~~s~~L~~~~~~~~~~~~~~~i~~~a~AL~~ip~~L~~NaG~d~~~~l~~l~~-----~~~~~G~d~~~g~i~d 424 (477)
||++|++|+++|++++.++++.+ |+++++|++||+.||++||+|||+|+.+++++|++ +++++|||+.+|++.|
T Consensus 443 GGa~e~~~s~~L~~~~~~~~g~e-q~~i~~~a~ALe~ip~~La~NaG~d~~~vv~~l~~~h~~~~~~~~G~d~~~g~~~d 521 (562)
T 3p9d_E 443 GGAAEVTMSLAVSEEADKQRGID-QYAFRGFAQALDTIPMTLAENSGLDPIGTLSTLKSKQLKEKISNIGVDCLGYGSND 521 (562)
T ss_dssp TTHHHHHHHHHHHHHHHTTCTTH-HHHHHHHHHHHTHHHHHHHHTTTSCHHHHHHHHHHHHHHTTTSSBCCBTTTTBCCB
T ss_pred CcHHHHHHHHHHHHHhccCccHH-HHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHhhcCCCceeEecCCCcccc
Confidence 99999999999999988878865 79999999999999999999999999999999987 3578999999999999
Q ss_pred cccCCcccchHHHHHHHHHHHHHHHHHhchhhhhhcCCC
Q 011794 425 MLQAGVIDPAKVTRCALQNAASVAGMVLTTQAIVVEKPK 463 (477)
Q Consensus 425 ~~~~gI~dp~~vk~~al~~A~e~a~~lL~iD~iI~~~~~ 463 (477)
|++.|||||+.||+++|+.|+|+|++|||||++|..++.
T Consensus 522 m~~~gI~dp~~vk~~al~~A~e~a~~iL~iD~ii~~~~~ 560 (562)
T 3p9d_E 522 MKELFVVDPFIGKKQQILLATQLCRMILKIDNVIISGKD 560 (562)
T ss_dssp TTTTTCEEEHHHHHHHHHHHHHHHHHHHTEEEEEECCC-
T ss_pred hHhccCEEcHHHHHHHHHHHHHHHHHHHHHHHhhcCCCC
Confidence 999999999999999999999999999999999987653
No 24
>3iyg_Z T-complex protein 1 subunit zeta; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=4.9e-82 Score=668.89 Aligned_cols=399 Identities=21% Similarity=0.321 Sum_probs=360.7
Q ss_pred CCChHHHHHHHHHHhhhhccCCCcchHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHhccccCC-CHHHH
Q 011794 1 MENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIE-GRDDI 79 (477)
Q Consensus 1 ~~hp~akll~~~a~~qd~~~GDGTTt~vvLa~~Ll~~~~~li~~gi~p~~I~~g~~~a~~~~~~~L~~~s~~~~-~~~~l 79 (477)
++||+|||++++|++||+++||||||+|+|+++||+++.+++++|+||+.|++||++|++.++++|+++++|++ +++.|
T Consensus 61 v~hp~akll~~~a~~qd~e~GDGTTtvvvLa~~Ll~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~~~~L 140 (517)
T 3iyg_Z 61 IQHPTASLIAKVATAQDDITGDGTTSNVLIIGELLKQADLYISEGLHPRIITEGFEAAKEKALQFLEQVKVSKEMDRETL 140 (517)
T ss_pred CcCHHHHHHHHHHHHHHHHhCCCceeHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHhhCcCCCCCHHHH
Confidence 58999999999999999999999999999999999999999999999999999999999999999999999988 88899
Q ss_pred HHHHHHhcCC------chhHHHHHHHHHHHhCCCC------c--ccccCCCccccceEEEEeeEEcccccCCCCccCccc
Q 011794 80 KAVATISAGN------DDLIGTMIADAIDKVGPDG------V--LSIESSSSFETTVEVEEGMEIDRGYISPQFVTNPEK 145 (477)
Q Consensus 80 ~~va~ts~~~------~~~~a~lv~~av~~v~~~~------~--I~i~~g~~~~ds~~~i~G~~~~~~~~~p~~~~~~~~ 145 (477)
.++|+||+++ .+.|++++++|+..+.+++ + |...+|++..|| ++++|++|+++|.||+
T Consensus 141 ~~va~tsl~sKi~~~~~d~la~l~vdaV~~V~~~~~~~dl~~I~I~k~~Gg~~~ds-~lv~G~v~dk~~~~p~------- 212 (517)
T 3iyg_Z 141 IDVARTSLRTKVHAELADVLTEAVVDSILAIKKQDEPIDLFMVEIMEMKHKSETDT-SLIRGLVLDHGARHPD------- 212 (517)
T ss_pred HHHHHHHhccccchhHHHHHHHHHHHHhheeccCCCcCChhHheeeeecCCCcccc-ceEeeEEEeccCCCCC-------
Confidence 9999999864 4889999999999886532 1 334689999999 9999999999999986
Q ss_pred cchhccceeEEEeccccC-------------CHHhH-----------HHHHHHHHhcCCC---------EEEEeccccHH
Q 011794 146 LIVEFENARVLVTDQKIS-------------AIKDI-----------IPLLEKTTQLRAP---------LLIIAEDVTGE 192 (477)
Q Consensus 146 ~~~~~~~~~Ill~~~~i~-------------~~~~l-----------~~~l~~i~~~~~~---------lvi~~~~i~~~ 192 (477)
|+++++||+|+++|++++ +++++ ...+++|...+.+ |||++++|++.
T Consensus 213 m~~~ien~kIll~~~~le~~k~e~~~~~~i~~~~~l~~~~~~E~~~i~~~v~~I~~~~~~v~~~~~~~lvIi~~~~I~d~ 292 (517)
T 3iyg_Z 213 MKKRVEDAYILTCNVSLEYEKTEVNSGFFYKSAEEREKLVKAERKFIEDRVKKIIELKKKVCGDSDKGFVVINQKGIDPF 292 (517)
T ss_pred ccccccCCeEEEecccccccccccceeEEeCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhccCCceEEEecccCCHH
Confidence 678999999999999753 34443 3456677666655 46778999999
Q ss_pred HHHHHHHhhhcccceEEEeeCCCcchhhhHHHHHHHHHhCceEecCCCCCcccCCCccC-CccceEE---EEecccEEEE
Q 011794 193 ALATLVVNKLRGILNVAAIKAPGFGERRKALLQDIAIVTGAEFQAGDLGLLIENTSVEQ-LGTARKV---TIRKDSTTII 268 (477)
Q Consensus 193 al~~l~~n~~~~~~~v~av~~~~~~~~~~~~l~~ia~~tGa~~~~~~~~~~~~~~~~~~-lG~~~~v---~~~~~~~~~~ 268 (477)
++++|.+++ |++|+ ++++++|+|||++|||++++ +++++++++ ||+|+ | ++++++++||
T Consensus 293 al~~L~~~g------I~~v~-----~v~~~~leria~~tGa~iv~-----~l~~l~~~~~LG~a~-v~e~~ig~~~~~~~ 355 (517)
T 3iyg_Z 293 SLDALAKEG------IIALR-----RAKRRNMERLTLACGGIALN-----SLDDLNPDCLLGHAG-VYEYTLGEEKFTFI 355 (517)
T ss_pred HHHHHHHCC------CEEEE-----ecCHHHHHHHHHHhCCEEec-----chhhCcccccCCcce-EEEEEEcCceEEEE
Confidence 999999876 35554 56789999999999999999 899999999 99999 9 4678899999
Q ss_pred eCCCChHHHHHHHHHHHHHHhhccchhhHHHHHHHHHHhcCCeEEEEecCCCHHHHHHHHHHHHHHHHHHHHHHHcC-Cc
Q 011794 269 ADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEG-IV 347 (477)
Q Consensus 269 ~~~~~~~~~~~~i~~l~~~l~~~~~~~~~~~l~~r~~~l~~~~~tI~v~G~t~~~~~e~~~~~~dal~~~~~~l~~g-vv 347 (477)
++|+++ +.+||+|||+|+.+++|.+|+++||++++|+++++| +|
T Consensus 356 ~g~~~~-----------------------------------~~~TI~lrG~t~~~l~E~kr~l~DAl~~~r~av~~~~iV 400 (517)
T 3iyg_Z 356 EKCNNP-----------------------------------RSVTLLIKGPNKHTLTQIKDAIRDGLRAVKNAIDDGCVV 400 (517)
T ss_pred eCCCCc-----------------------------------hhheeeecCCcHHHHHHHHHHHHHHHHHHHHHHhcceEe
Confidence 999875 358999999999999999999999999999999999 99
Q ss_pred CCCcHHHHHHHHhhhhhhccCCchhHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHcc----CCceeEEcCCCccc
Q 011794 348 PGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAGVEGEVVVEKVKDS----EWTTGYNAMTDKYE 423 (477)
Q Consensus 348 pGGGa~e~~~s~~L~~~~~~~~~~~~~~~i~~~a~AL~~ip~~L~~NaG~d~~~~l~~l~~~----~~~~G~d~~~g~i~ 423 (477)
||||++|++++++|++++.+.++.+ |+++++|++||+.+|++||+|||+|+.+++++|++. ++++|||+.+|++.
T Consensus 401 pGGGa~e~~~s~~L~~~~~~~~g~e-q~~i~~~a~ALe~iP~~La~NaG~d~~~~v~~l~~~h~~~~~~~G~d~~~g~~~ 479 (517)
T 3iyg_Z 401 PGAGAVEVAMAEALVKYKPSVKGRA-QLGVQAFADALLIIPKVLAQNSGFDLQETLVKVQAEHSESGQLVGVDLNTGEPM 479 (517)
T ss_pred cCccHHHHHHHHHHHHHhccCCHHH-HHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHhcCCCcEEEeCCCCccc
Confidence 9999999999999999998777765 799999999999999999999999999999999873 56899999999999
Q ss_pred ccccCCcccchHHHHHHHHHHHHHHHHHhchhhhhhc
Q 011794 424 NMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAIVVE 460 (477)
Q Consensus 424 d~~~~gI~dp~~vk~~al~~A~e~a~~lL~iD~iI~~ 460 (477)
||++.|||||+.||+++|+.|+|+|++|||||+||..
T Consensus 480 d~~~~gI~dp~~vk~~al~~A~e~a~~iL~iD~ii~~ 516 (517)
T 3iyg_Z 480 VAAEAGIWDNYCVKKQLLHSCTVIATNILLVDEIMRA 516 (517)
T ss_pred chhhccCeecHHHHHHHHHHHHHHHHHHHHHHHHhhC
Confidence 9999999999999999999999999999999999864
No 25
>3p9d_H T-complex protein 1 subunit theta; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_h* 4d8q_H* 4d8r_h*
Probab=100.00 E-value=1.6e-83 Score=686.66 Aligned_cols=409 Identities=17% Similarity=0.264 Sum_probs=356.0
Q ss_pred CCChHHHHHHHHHHhhhhccCCCcchHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHhccccC----CCH
Q 011794 1 MENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPI----EGR 76 (477)
Q Consensus 1 ~~hp~akll~~~a~~qd~~~GDGTTt~vvLa~~Ll~~~~~li~~gi~p~~I~~g~~~a~~~~~~~L~~~s~~~----~~~ 76 (477)
++||+|||++++|++||+++||||||+|||+++||+++.+++.+|+||+.|++||+.|++.++++|++++.++ +++
T Consensus 77 v~hP~Akll~e~a~~qd~e~GDGTTtvvvLa~~Ll~~a~~ll~~GihP~~I~~G~~~A~~~a~e~L~~~a~~v~~~~~~~ 156 (568)
T 3p9d_H 77 IVHPAVKVLVMATEQQKIDMGDGTNLVMILAGELLNVSEKLISMGLSAVEIIQGYNMARKFTLKELDEMVVGEITDKNDK 156 (568)
T ss_dssp CCCHHHHHHHHHHHHHHTTSSSCHHHHHHHHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHCCSCCCCCCTT
T ss_pred cCCHHHHHHHHHHHhhhceeCCCceehHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhccccCCCCCCH
Confidence 5899999999999999999999999999999999999999999999999999999999999999999999876 578
Q ss_pred HHHHHHHHHhcC-----CchhHHHHHHHHHHHhCCC-----C-------cccc--cCCCccccceEEEEeeEEcccccCC
Q 011794 77 DDIKAVATISAG-----NDDLIGTMIADAIDKVGPD-----G-------VLSI--ESSSSFETTVEVEEGMEIDRGYISP 137 (477)
Q Consensus 77 ~~l~~va~ts~~-----~~~~~a~lv~~av~~v~~~-----~-------~I~i--~~g~~~~ds~~~i~G~~~~~~~~~p 137 (477)
+.|.++|+||++ ++++|++++++|+.+++++ + .|++ .+|++++|| ++++|++|+++|.
T Consensus 157 ~~l~~va~tsl~sK~~~~~~~i~~livdAv~~V~~~~~~~~~~~~~dl~~I~I~k~~Ggs~~dS-~lv~G~v~dk~~~-- 233 (568)
T 3p9d_H 157 NELLKMIKPVISSKKYGSEDILSELVSEAVSHVLPVAQQAGEIPYFNVDSIRVVKIMGGSLSNS-TVIKGMVFNREPE-- 233 (568)
T ss_dssp HHHHHHHHHHHTTTSTTCHHHHHHHHHHHHTTSCC---------CCCGGGCEEEEEESSCGGGC-EEESSCCBSSCBS--
T ss_pred HHHHHHHHHHhhccCcchHHHHHHHHHHHHHHHhhccccccCCcccccceEEEEEccCCCcchh-eeeccEEEeeccc--
Confidence 899999999974 3589999999999999874 3 3555 469999999 9999999999863
Q ss_pred CCccCccccchhcc---ceeEEEeccc-------------cCCHHhHHH-----------HHHHHHhcCCCEEEEecccc
Q 011794 138 QFVTNPEKLIVEFE---NARVLVTDQK-------------ISAIKDIIP-----------LLEKTTQLRAPLLIIAEDVT 190 (477)
Q Consensus 138 ~~~~~~~~~~~~~~---~~~Ill~~~~-------------i~~~~~l~~-----------~l~~i~~~~~~lvi~~~~i~ 190 (477)
+|+++++ ||||++++++ +++++++.+ +++++.+.|+||||++++|+
T Consensus 234 -------~m~~~i~~~~n~kIlll~~~Le~~k~e~~~~v~i~~~~~l~~~~~~E~~~l~~~v~~I~~~g~~vvi~~~~I~ 306 (568)
T 3p9d_H 234 -------GHVKSLSEDKKHKVAVFTCPLDIANTETKGTVLLHNAQEMLDFSKGEEKQIDAMMKEIADMGVECIVAGAGVG 306 (568)
T ss_dssp -------SGGGSCCCCSSCEEEEECSCSSSCCCSSSCEEECCSHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEECSCCC
T ss_pred -------CCcEEEecCCcceEEEEccCccccccccCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhcCCeEEEECCCcC
Confidence 3788898 9999999997 566766644 78899999999999999999
Q ss_pred HHHHHHHHHhhhcccceEEEeeCCCcchhhhHHHHHHHHHhCceEecCCCCCcccCCCccCCccceEEEE---ecccEEE
Q 011794 191 GEALATLVVNKLRGILNVAAIKAPGFGERRKALLQDIAIVTGAEFQAGDLGLLIENTSVEQLGTARKVTI---RKDSTTI 267 (477)
Q Consensus 191 ~~al~~l~~n~~~~~~~v~av~~~~~~~~~~~~l~~ia~~tGa~~~~~~~~~~~~~~~~~~lG~~~~v~~---~~~~~~~ 267 (477)
+.++++|.+++ |+||+.+ ++.+|+|||++|||++++ +++++++++||+|+.|++ ++++++|
T Consensus 307 ~~al~~L~~~g------I~av~~v-----~~~~leria~~tGa~ivs-----~l~~l~~~~LG~a~~v~~~~ig~~~~~~ 370 (568)
T 3p9d_H 307 ELALHYLNRYG------ILVLKVP-----SKFELRRLCRVCGATPLP-----RLGAPTPEELGLVETVKTMEIGGDRVTV 370 (568)
T ss_dssp HHHHHHHHHHT------CEEECCC-----CHHHHHHHHHHHSCCCCS-----SSSCCCGGGCEECSCCCCCEETTEECBC
T ss_pred hHHHHHHHHCC------eEEEecC-----CHHHHHHHHHHhCCEEEe-----ccccCCHHHCCcceEEEEEEecCceEEE
Confidence 99999999986 5777655 488999999999999999 799999999999999975 4689999
Q ss_pred EeCCCChHHHHHHHHHHHHHHhhccchhhHHHHHHHHHHhcCCeEEEEecCCCHHHHHHHHHHHHHHHHHHHHHHH--cC
Q 011794 268 IADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIE--EG 345 (477)
Q Consensus 268 ~~~~~~~~~~~~~i~~l~~~l~~~~~~~~~~~l~~r~~~l~~~~~tI~v~G~t~~~~~e~~~~~~dal~~~~~~l~--~g 345 (477)
|++|+. |.++.|||+|||+|+.+++|.+|+++||++++|++++ ++
T Consensus 371 ~~g~~~---------------------------------l~~~~~TIllrG~t~~~l~E~er~i~DAL~vvr~av~~~d~ 417 (568)
T 3p9d_H 371 FKQEQG---------------------------------EISRTSTIILRGATQNNLDDIERAIDDGVAAVKGLMKPSGG 417 (568)
T ss_dssp CCCCSS---------------------------------SCCSSCEEEEEESCHHHHHHHHHHHHHHHHHHHHTTSTTCC
T ss_pred EecCCC---------------------------------CCCCeEEEEECCCcHHHHHHHHHHHHHHHHHHHHHhcccCC
Confidence 999862 1257899999999999999999999999999999999 76
Q ss_pred -CcCCCcHHHHHHHHhhhhhhccCCchhHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHcc------------CCc
Q 011794 346 -IVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAGVEGEVVVEKVKDS------------EWT 412 (477)
Q Consensus 346 -vvpGGGa~e~~~s~~L~~~~~~~~~~~~~~~i~~~a~AL~~ip~~L~~NaG~d~~~~l~~l~~~------------~~~ 412 (477)
+|||||++|++|+++|++++.+.++.+ |+++++|++||+.||++||+|||+|+.+++++|++. +++
T Consensus 418 ~iVpGGGa~E~~ls~~L~~~a~~~~g~e-q~~i~~fa~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~~~~~~~~ 496 (568)
T 3p9d_H 418 KLLPGAGATEIELISRITKYGERTPGLL-QLAIKQFAVAFEVVPRTLAETAGLDVNEVLPNLYAAHNVTEPGAVKTDHLY 496 (568)
T ss_dssp CCCCTTTHHHHHHHHHHHHHHHTCCSTH-HHHHHHHHHGGGHHHHHHHHHHTCCHHHHHHHHHHCCCCSSCCCCCCTTSS
T ss_pred eEEeCCcHHHHHHHHHHHHHhccCCcHH-HHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHhhhhcccccccCCCc
Confidence 999999999999999999998888875 799999999999999999999999999999999984 247
Q ss_pred eeEEcCCCc---ccccccCCcccchHHHHHHHHHHHHHHHHHhchhhhhhcCCCCCCCCC
Q 011794 413 TGYNAMTDK---YENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAIVVEKPKPKTPVA 469 (477)
Q Consensus 413 ~G~d~~~g~---i~d~~~~gI~dp~~vk~~al~~A~e~a~~lL~iD~iI~~~~~~~~~~~ 469 (477)
+|||+.+|+ +.||++.|||||+.||+++|+.|+|+|++|||||++|..+|...|.+|
T Consensus 497 ~G~d~~~g~~~~~~d~~~~gI~dp~~vk~~al~~A~e~a~~iL~iD~ii~~~~~~~~~~~ 556 (568)
T 3p9d_H 497 KGVDIDGESDEGVKDIREENIYDMLATKKFAINVATEAATTVLSIDQIIMAKKAGGPRAP 556 (568)
T ss_dssp SCCCHHHHTCCCCHHHHHHHHHHHHHHHHHHHHCCEECBCCC------------------
T ss_pred eeEcccCCCcccccChHHccCEEcHHHHHHHHHHHHHHHHHHHhHHHHhhccccCCCCCC
Confidence 899999997 999999999999999999999999999999999999999988766555
No 26
>3p9d_F T-complex protein 1 subunit zeta; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_f* 4d8q_F* 4d8r_f*
Probab=100.00 E-value=2.8e-81 Score=667.67 Aligned_cols=406 Identities=20% Similarity=0.274 Sum_probs=361.8
Q ss_pred CCChHHHHHHHHHHhhhhccCCCcchHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHhccccCC----CH
Q 011794 1 MENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIE----GR 76 (477)
Q Consensus 1 ~~hp~akll~~~a~~qd~~~GDGTTt~vvLa~~Ll~~~~~li~~gi~p~~I~~g~~~a~~~~~~~L~~~s~~~~----~~ 76 (477)
++||+|||++++|++||+++||||||+||||++||+++.+++++|+||+.|++||++|++.++++|+++++|++ ++
T Consensus 68 v~hP~akll~e~a~~qd~e~GDGTTtvvVLA~eLL~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~a~~v~~~~~~~ 147 (546)
T 3p9d_F 68 IQSPTAVLIARAAAAQDEITGDGTTTVVCLVGELLRQAHRFIQEGVHPRIITDGFEIARKESMKFLDEFKISKTNLSNDR 147 (546)
T ss_dssp CCCHHHHHHHHHHHHHHHHCSSCHHHHHHHHHHHHHHHHHHTTTTBCHHHHHHHHHHHHHHHHHHHHHHCCCCSSSSTTC
T ss_pred CcCHHHHHHHHHHHHHHHHhCCCcccHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHhhccccccccCH
Confidence 58999999999999999999999999999999999999999999999999999999999999999999999884 67
Q ss_pred HHHHHHHHHhcCC------chhHHHHHHHHHHHhCCC-------Cccc--ccCCCccccceEEEEeeEEcccccCCCCcc
Q 011794 77 DDIKAVATISAGN------DDLIGTMIADAIDKVGPD-------GVLS--IESSSSFETTVEVEEGMEIDRGYISPQFVT 141 (477)
Q Consensus 77 ~~l~~va~ts~~~------~~~~a~lv~~av~~v~~~-------~~I~--i~~g~~~~ds~~~i~G~~~~~~~~~p~~~~ 141 (477)
+.|.++|+||+++ .+.|++++++|+..+.+. .+|+ ..+|++..|| ++++|++|+++|.||+
T Consensus 148 ~~L~~vA~tsl~sKi~~~~~d~la~l~vdaV~~V~~~~~~~~dl~~I~i~ki~Gg~~~ds-~lv~G~v~dk~~~~~~--- 223 (546)
T 3p9d_F 148 EFLLQVARSSLLTKVDADLTEVLTPIVTDAVLSVYDAQADNLDLHMVEIMQMQHLSPKDT-TFIKGLVLDHGGRHPD--- 223 (546)
T ss_dssp HHHHHHHHHHTCSTTHHHHCSSHHHHHHHHHHHTHHHHHTTCCGGGEEEECCCCSCTTTC-CCCSSCEESCCCCSSS---
T ss_pred HHHHHHHHHHhCCCcchhHHHHHHHHHHHhheEeecCCCCcccchheEEEEecCCCcccc-EEEeeEEEeccccccc---
Confidence 8999999999874 578999999999988531 1233 3589999999 9999999999999984
Q ss_pred CccccchhccceeEEEeccccC-------------CHHhH-----------HHHHHHHHhc---------CCC-EEEEec
Q 011794 142 NPEKLIVEFENARVLVTDQKIS-------------AIKDI-----------IPLLEKTTQL---------RAP-LLIIAE 187 (477)
Q Consensus 142 ~~~~~~~~~~~~~Ill~~~~i~-------------~~~~l-----------~~~l~~i~~~---------~~~-lvi~~~ 187 (477)
|+++++||||+++|++++ +++++ ...+++|... |+| |||+++
T Consensus 224 ----m~~~~en~kIll~~~~Le~~k~e~~~~~~i~~~~~~~~~~~~E~~~~~~~v~~I~~~~~~v~~~~~g~~~vIi~~k 299 (546)
T 3p9d_F 224 ----MPTRVKNAYVLILNVSLEYEKTEVNSGFFYSSADQRDKLAASERKFVDAKLKKIIDLKNEVCGMDPDKGFVIINQK 299 (546)
T ss_dssp ----SCSSBCSCCCCEECCCSSSCCCSSCBCCCCCSSSCHHHHHHHHHHHHHHHHHHHHHCC-----------CEEEESS
T ss_pred ----CcceecCceEEEecCcccccccccCceEEEcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCceEEEecC
Confidence 778999999999998753 22222 2456666654 344 778889
Q ss_pred cccHHHHHHHHHhhhcccceEEEeeCCCcchhhhHHHHHHHHHhCceEecCCCCCcccCCCccCCccceEEE---Eeccc
Q 011794 188 DVTGEALATLVVNKLRGILNVAAIKAPGFGERRKALLQDIAIVTGAEFQAGDLGLLIENTSVEQLGTARKVT---IRKDS 264 (477)
Q Consensus 188 ~i~~~al~~l~~n~~~~~~~v~av~~~~~~~~~~~~l~~ia~~tGa~~~~~~~~~~~~~~~~~~lG~~~~v~---~~~~~ 264 (477)
+|+++++++|.+|++ ++| +++++.+|+|||++|||++++ +++++++++||+|+.|+ +++++
T Consensus 300 ~I~~~Al~~L~~~gI------~~v-----r~v~~~~leria~~tGa~ii~-----~l~~l~~~~LG~a~~v~~~~ig~~~ 363 (546)
T 3p9d_F 300 GIDPMSLDVFAKHNI------LAL-----RRAKRRNMERLQLVTGGEAQN-----SVEDLSPQILGFSGLVYQETIGEEK 363 (546)
T ss_dssp CCCHHHHHHHTTTTC------EEE-----CCCCHHHHHHHHHTTTBCCCC-----CCSSCSTTCCBCCCCBCBCCCSSCC
T ss_pred cCcHHHHHHHHHCCC------eeE-----ecCCHHHHHHHHHHhCCEEec-----chhhCCHhHCCcccEEEEEEecCce
Confidence 999999999999974 555 456789999999999999999 89999999999999994 67889
Q ss_pred EEEEeCCCChHHHHHHHHHHHHHHhhccchhhHHHHHHHHHHhcCCeEEEEecCCCHHHHHHHHHHHHHHHHHHHHHHHc
Q 011794 265 TTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEE 344 (477)
Q Consensus 265 ~~~~~~~~~~~~~~~~i~~l~~~l~~~~~~~~~~~l~~r~~~l~~~~~tI~v~G~t~~~~~e~~~~~~dal~~~~~~l~~ 344 (477)
|+||++|+++ ..|||+|||+|+.+++|++|+++||++++|+++++
T Consensus 364 ~~~i~g~~~~-----------------------------------~~~tI~lrG~te~~l~E~kr~l~DAl~~~r~av~~ 408 (546)
T 3p9d_F 364 FTYVTENTDP-----------------------------------KSCTILIKGSTHYALAQTKDAVRDGLRAVANVLKD 408 (546)
T ss_dssp CEECSSCSCC-----------------------------------SCEEEECCCSCHHHHHHHHHHHHHHHHHHHHHTTS
T ss_pred EEEEecCCCC-----------------------------------ceEEEEECCCCHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 9999999874 47999999999999999999999999999999999
Q ss_pred C-CcCCCcHHHHHHHHhhhh---hhccCCchhHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHc---------cCC
Q 011794 345 G-IVPGGGAALVHLSDHVPA---IKDKLEDADERLGADIVQKALVAPASLIAHNAGVEGEVVVEKVKD---------SEW 411 (477)
Q Consensus 345 g-vvpGGGa~e~~~s~~L~~---~~~~~~~~~~~~~i~~~a~AL~~ip~~L~~NaG~d~~~~l~~l~~---------~~~ 411 (477)
| +|||||++|++++++|++ ++.+.++.+ |+++++|++||+.||++|++|||+|+.+++++|++ +++
T Consensus 409 ~~iVpGGGa~e~~~s~~L~~~~~~~~~~~g~e-q~~i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~~~~ 487 (546)
T 3p9d_F 409 KNIIPGAGAFYIALSRYLRSANMNKLGAKGKT-KTGIEAFAEALLVIPKTLVKNSGFDPLDVLAMVEDELDDAQDSDETR 487 (546)
T ss_dssp CCEEETTTHHHHHHHHHHHHHHTTTTTTTSHH-HHHHHHHHHHHHHHHHHHHTTTCCTTTTCCHHHHHHHHHHTTSTTSS
T ss_pred CcEEeCCCHHHHHHHHHHHhhhhhhhcCchHH-HHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHhhhhhcccCCc
Confidence 9 999999999999999999 577777865 79999999999999999999999999999999986 345
Q ss_pred ceeEEcCCCcccccccCCcccchHHHHHHHHHHHHHHHHHhchhhhhhcCCCCCC
Q 011794 412 TTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAIVVEKPKPKT 466 (477)
Q Consensus 412 ~~G~d~~~g~i~d~~~~gI~dp~~vk~~al~~A~e~a~~lL~iD~iI~~~~~~~~ 466 (477)
++|||+.+|++.||++.|||||+.||+++|+.|+|+|++|||||+||..++....
T Consensus 488 ~~G~d~~~g~~~d~~~~gI~dp~~vk~~al~~A~~~a~~iL~iD~ii~~~~~~~~ 542 (546)
T 3p9d_F 488 YVGVDLNIGDSCDPTIEGIWDSYRVLRNAITGATGIASNLLLCDELLRAGRSTLK 542 (546)
T ss_dssp CCCCBTTTTBCCCSGGGTCEEEHHHHHHHHHHHHHHHHHHHTEEEEEEECCSSCC
T ss_pred eeeEeCCCCeecchHhccCEecHHHHHHHHHHHHHHHHHHHHHHHHHcCCcccCC
Confidence 7999999999999999999999999999999999999999999999988765543
No 27
>3m6c_A 60 kDa chaperonin 1; chaperone, ATP-binding, nucleotide-binding; 2.20A {Mycobacterium tuberculosis}
Probab=100.00 E-value=8.1e-43 Score=312.58 Aligned_cols=193 Identities=46% Similarity=0.758 Sum_probs=188.5
Q ss_pred eEEEEeeEEcccccCCCCccCccccchhccceeEEEeccccCCHHhHHHHHHHHHhcCCCEEEEeccccHHHHHHHHHhh
Q 011794 122 VEVEEGMEIDRGYISPQFVTNPEKLIVEFENARVLVTDQKISAIKDIIPLLEKTTQLRAPLLIIAEDVTGEALATLVVNK 201 (477)
Q Consensus 122 ~~~i~G~~~~~~~~~p~~~~~~~~~~~~~~~~~Ill~~~~i~~~~~l~~~l~~i~~~~~~lvi~~~~i~~~al~~l~~n~ 201 (477)
+++++||.||+||.||||++++++|..+++||+||++|.+|++.++++|++|++.+.|.||+|++++|+++||.+|+.|+
T Consensus 2 levvEGmqfDrGYiSpyfvtd~~~m~~~le~p~ILitdkKIs~i~~ilP~LE~~~~~~kpLlIIAedvegeaLatLvvNk 81 (194)
T 3m6c_A 2 LEFTEGIGFDKGFLSAYFVTDFDNQQAVLEDALILLHQDKISSLPDLLPLLEKVAGTGKPLLIVAEDVEGEALATLVVNA 81 (194)
T ss_dssp CCCCSSEEESCCBSCGGGCSBTTTTBEEEEEEEEEEBSSEECCHHHHHHHHHHHHHHTCCEEEEESEECHHHHHHHHHHH
T ss_pred eEEEeeeEccCcccCceeeeccCCcEEEEecceEEEEcCccCCHHHHHHHHHHHHHhCCCeEEEecccccchhhhhhhhh
Confidence 47899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hcccceEEEeeCCCcchhhhHHHHHHHHHhCceEecCCCCCcccCCCccCCccceEEEEecccEEEEeCCCChHHHHHHH
Q 011794 202 LRGILNVAAIKAPGFGERRKALLQDIAIVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARI 281 (477)
Q Consensus 202 ~~~~~~v~av~~~~~~~~~~~~l~~ia~~tGa~~~~~~~~~~~~~~~~~~lG~~~~v~~~~~~~~~~~~~~~~~~~~~~i 281 (477)
++|+++|+|||+|+||+.|+..|+|||.+|||++++++.++++++++.++||+|++|.+++++++++.|.++++.+++|+
T Consensus 82 lrg~l~v~AVKAPgfGd~Rk~~L~DiAilTGg~visee~g~~Le~~~~~~LG~a~~v~vtkd~T~iv~G~g~~~~I~~Rv 161 (194)
T 3m6c_A 82 IRKTLKAVAVKGPYFGDRRKAFLEDLAVVTGGQVVNPDAGMVLREVGLEVLGSARRVVVSKDDTVIVDGGGTAEAVANRA 161 (194)
T ss_dssp HHTSSCEEEEECSSCHHHHHHHHHHHHHHHTCCCBCGGGTCCGGGCCGGGCEEEEEEEECSSCEEEEEECCCHHHHHHHH
T ss_pred ccceEEEEEEECCCCchhhhhhhHhHHHhcCCeEEeccCCcccccCCHHHCCCccEEEEcCCceEEecCCCCHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhccchhhHHHHHHHHHHhcCCeEEE
Q 011794 282 AQLKKELAETDSVYDSEKLAERIAKLSGGVAVI 314 (477)
Q Consensus 282 ~~l~~~l~~~~~~~~~~~l~~r~~~l~~~~~tI 314 (477)
++|+++++.+.|+|+|++|++|+++|+|+++.|
T Consensus 162 ~qIr~~ie~t~s~ydkEKLqERlAkLsGGVAVI 194 (194)
T 3m6c_A 162 KHLRAEIDKSDSDWDREKLGERLAKLAGGVAVI 194 (194)
T ss_dssp HHHHHHHHTCCCHHHHHHHHHHHHHHHHHBCCC
T ss_pred HHHHHHHHhcCCHHHHHHHHHHHHHHcCCcEEC
Confidence 999999999999999999999999999998753
No 28
>3osx_A 60 kDa chaperonin; alpha, beta, apical domain, chaperone; 1.55A {Xenorhabdus nematophila} SCOP: c.8.5.1 PDB: 1kid_A 1fy9_A 1la1_A 1fya_A 1jon_A 1dk7_A 1dkd_A
Probab=100.00 E-value=1.5e-41 Score=304.98 Aligned_cols=189 Identities=52% Similarity=0.859 Sum_probs=184.5
Q ss_pred EEEeeEEcccccCCCCccCccccchhccceeEEEeccccCCHHhHHHHHHHHHhcCCCEEEEeccccHHHHHHHHHhhhc
Q 011794 124 VEEGMEIDRGYISPQFVTNPEKLIVEFENARVLVTDQKISAIKDIIPLLEKTTQLRAPLLIIAEDVTGEALATLVVNKLR 203 (477)
Q Consensus 124 ~i~G~~~~~~~~~p~~~~~~~~~~~~~~~~~Ill~~~~i~~~~~l~~~l~~i~~~~~~lvi~~~~i~~~al~~l~~n~~~ 203 (477)
=.+|+.||+||+||||++++++|..+++||+||++|.+|++.++++|+||++.+.+.||+|++++|+++||.+|+.|+++
T Consensus 11 ~~~~~qfDrGYiSPYfvtd~e~m~~~le~p~ILitdkKIs~i~~ilP~LE~v~~~~rpLlIIAEDvegEALatLvvNklr 90 (201)
T 3osx_A 11 GSEGMQFDRGYLSPYFINKPESGSVELENPYILLVDKKISNIRELLPVLEGVAKASKPLVIIAEDVEGEALATLVVNNMR 90 (201)
T ss_dssp -CCCEEESCCBSCGGGCSBTTTTBEEEESCEEEEEEEEECCHHHHHHHHHHHHTSSCCEEEEEEEECHHHHHHHHHHHHH
T ss_pred CccccEecCccCChheeecccCCEEEecCCeEEEEcCccCCHHHHHHHHHHHHHhCCCeEEEeccccchhhhHHHHhhcc
Confidence 34699999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccceEEEeeCCCcchhhhHHHHHHHHHhCceEecCCCCCcccCCCccCCccceEEEEecccEEEEeCCCChHHHHHHHHH
Q 011794 204 GILNVAAIKAPGFGERRKALLQDIAIVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQ 283 (477)
Q Consensus 204 ~~~~v~av~~~~~~~~~~~~l~~ia~~tGa~~~~~~~~~~~~~~~~~~lG~~~~v~~~~~~~~~~~~~~~~~~~~~~i~~ 283 (477)
|+++|+|||+|+||+.|+..|+|||.+|||++++++.++++++++.++||+|++|.+++++++++.|.++++.+++|+++
T Consensus 91 g~l~v~AVKAPgFGdrRk~~L~DIAilTGg~visee~g~~Le~~~~~~LG~a~~V~vtkd~TtIv~G~G~~~~I~~Rv~q 170 (201)
T 3osx_A 91 GIVKVASVKAPGFGDRRKAMLQDIATLTNGTVISEEIGLELEKATLEDLGQAKRVVINKDTTTIIDGVGEEGAIAARVTQ 170 (201)
T ss_dssp TSCCEEEEECSSCHHHHHHHHHHHHHHHTCCCBCGGGTCCGGGCCGGGCEEEEEEEECSSCEEEEEECCCHHHHHHHHHH
T ss_pred ceEEEEEEeCCCCccchhhhhHhHHHHhCCEEEecccCCccccCCHhhCCCccEEEEcCCceEEecCCCCHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhccchhhHHHHHHHHHHhcCCeE
Q 011794 284 LKKELAETDSVYDSEKLAERIAKLSGGVA 312 (477)
Q Consensus 284 l~~~l~~~~~~~~~~~l~~r~~~l~~~~~ 312 (477)
|+++++.+.|+|+|++|++|+++|+|+++
T Consensus 171 Ir~qie~t~S~ydkEKLqERLAKLsGGVA 199 (201)
T 3osx_A 171 IRQQIEESTSDYDREKLQERVAKLAGGVK 199 (201)
T ss_dssp HHHHHHTCCCHHHHHHHHHHHHHHHHTCC
T ss_pred HHHHHHhcCCHHHHHHHHHHHHHHcCCCc
Confidence 99999999999999999999999999876
No 29
>1srv_A Protein (groel (HSP60 class)); chaperone, cell division, ATP-binding, phosphorylation; 1.70A {Thermus thermophilus} SCOP: c.8.5.1
Probab=100.00 E-value=2.2e-32 Score=234.04 Aligned_cols=144 Identities=55% Similarity=0.902 Sum_probs=141.3
Q ss_pred eeEEcccccCCCCccCccccchhccceeEEEeccccCCHHhHHHHHHHHHhcCCCEEEEeccccHHHHHHHHHhhhcccc
Q 011794 127 GMEIDRGYISPQFVTNPEKLIVEFENARVLVTDQKISAIKDIIPLLEKTTQLRAPLLIIAEDVTGEALATLVVNKLRGIL 206 (477)
Q Consensus 127 G~~~~~~~~~p~~~~~~~~~~~~~~~~~Ill~~~~i~~~~~l~~~l~~i~~~~~~lvi~~~~i~~~al~~l~~n~~~~~~ 206 (477)
|+.|++||.||||++++++|..+++||+||++|.+|++.++++|++|++.+.|.||+|++++|+++||.+|+.|+++|++
T Consensus 1 GmqfDrGYlSpYfvtd~e~m~~~le~p~ILitdkKIs~i~~llP~LE~v~~~~~pLlIIAedvegeaLatLvvNklrg~l 80 (145)
T 1srv_A 1 GYQFDKGYISPYFVTNPETMEAVLEDAFILIVEKKVSNVRELLPILEQVAQTGKPLLIIAEDVEGEALATLVVNKLRGTL 80 (145)
T ss_dssp CEEESCCBSCGGGCSBTTTTBEEEEEEEEEEESSEECCHHHHHHHHHHHHTTTCCEEEEESEECHHHHHHHHHHHHTTSC
T ss_pred CccccCCccCceeecCccccEEEeeccEEEEecccccCHHHHHHHHHHHHHHCCCEEEEecccchhhhhhhhhhhhcccc
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eEEEeeCCCcchhhhHHHHHHHHHhCceEecCCCCCcccCCCccCCccceEEEEecccEEEEeC
Q 011794 207 NVAAIKAPGFGERRKALLQDIAIVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIAD 270 (477)
Q Consensus 207 ~v~av~~~~~~~~~~~~l~~ia~~tGa~~~~~~~~~~~~~~~~~~lG~~~~v~~~~~~~~~~~~ 270 (477)
+|+|||+|+||+.|+..|+|||.+|||++++++.++++++++.++||+|++|+++++++++++|
T Consensus 81 ~v~AVKAPgfGd~Rk~~L~DiAilTGg~visee~g~~Le~~~~~~LG~a~~v~vtkd~TtIv~G 144 (145)
T 1srv_A 81 SVAAVKAPGFGDRRKEMLKDIAAVTGGTVISEELGFKLENATLSMLGRAERVRITKDETTIVGG 144 (145)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHTCCEECTTTTCCGGGCCGGGCEEEEEEEECSSCEEEEEE
T ss_pred eEEEEeCCCcchhhHHHHHHHHHHhCCEEEccccCCccccCCHhHCCccCEEEEcCCCeEEeCC
Confidence 9999999999999999999999999999999999999999999999999999999999999875
No 30
>1gml_A T-complex protein 1 subunit gamma; chaperone, chaperonin, actin, tubulin; 2.2A {Mus musculus} SCOP: c.8.5.2 PDB: 1gn1_A
Probab=99.91 E-value=2e-24 Score=197.17 Aligned_cols=146 Identities=24% Similarity=0.309 Sum_probs=122.0
Q ss_pred cccceEEEEeeEEcccccCCCCccCccccchhccceeEEEeccccC-------------CHHh-----------HHHHHH
Q 011794 118 FETTVEVEEGMEIDRGYISPQFVTNPEKLIVEFENARVLVTDQKIS-------------AIKD-----------IIPLLE 173 (477)
Q Consensus 118 ~~ds~~~i~G~~~~~~~~~p~~~~~~~~~~~~~~~~~Ill~~~~i~-------------~~~~-----------l~~~l~ 173 (477)
++|| ++++|++|++++.+| +||+.++||||++++++++ ++++ +..+++
T Consensus 1 ~~dS-~lv~Gvvl~k~~~~~-------~mpk~i~nakI~ll~~~Le~~k~e~~~~v~i~~~~~~~~~~~~E~~~l~~~v~ 72 (178)
T 1gml_A 1 MEDS-CVLRGVMINKDVTHP-------RMRRYIKNPRIVLLDSSLEYKKGESQTDIEITREEDFTRILQMEEEYIHQLCE 72 (178)
T ss_dssp --CC-SEEEEEEESCCCSST-------TSCCEEESCCEEEESSCBSCC--------------CHHHHHHHHHHHHHHHHH
T ss_pred CCCc-EEEEEEEEeccccCC-------CCCcccccceEEEEecccCCccccCccEEEECCHHHHHHHHHHHHHHHHHHHH
Confidence 4688 899999999999886 3788899999999999753 2222 356788
Q ss_pred HHHhcCCCEEEEeccccHHHHHHHHHhhhcccceEEEeeCCCcchhhhHHHHHHHHHhCceEecCCCCCcccCCCccCCc
Q 011794 174 KTTQLRAPLLIIAEDVTGEALATLVVNKLRGILNVAAIKAPGFGERRKALLQDIAIVTGAEFQAGDLGLLIENTSVEQLG 253 (477)
Q Consensus 174 ~i~~~~~~lvi~~~~i~~~al~~l~~n~~~~~~~v~av~~~~~~~~~~~~l~~ia~~tGa~~~~~~~~~~~~~~~~~~lG 253 (477)
+|+++|+||||++++|+|.++++|.++++ +|| +++++++|+|||++|||++++ ++++++++.||
T Consensus 73 kI~~~g~nVVl~~k~I~d~a~~~l~k~gI------~~v-----r~v~~~dleria~atGa~iv~-----~~~~l~~~~LG 136 (178)
T 1gml_A 73 DIIQLKPDVVITEKGISDLAQHYLMRANV------TAI-----RRVRKTDNNRIARACGARIVS-----RPEELREDDVG 136 (178)
T ss_dssp HHHTTCCSEEEESSCBCHHHHHHHHHTTC------EEE-----CCCCHHHHHHHHHHHCCCEES-----CGGGCCGGGSB
T ss_pred HHhhcCCcEEEECCcccHHHHHHHHHCCC------EEE-----ecCCHHHHHHHHHHhCCeEeC-----ChhhCChhhhC
Confidence 99999999999999999999999999985 554 677899999999999999999 89999999999
Q ss_pred c-ceEEEE---ecccEEEEeCCCChHHHHHHHHHHHHHHhhccchhhHHHHHHHHHHhcCCeEEEEecCCCHH
Q 011794 254 T-ARKVTI---RKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATET 322 (477)
Q Consensus 254 ~-~~~v~~---~~~~~~~~~~~~~~~~~~~~i~~l~~~l~~~~~~~~~~~l~~r~~~l~~~~~tI~v~G~t~~ 322 (477)
+ |+.|+. ++++++||++|+++ +.|||+|||+|.+
T Consensus 137 ~~~~~v~~~~ig~~~~~~~~gc~~~-----------------------------------~~~TIllRG~~~~ 174 (178)
T 1gml_A 137 TGAGLLEIKKIGDEYFTFITDCKDP-----------------------------------KACTILLRGASHH 174 (178)
T ss_dssp CCEEEEEEEEETTEEEEEEEEESST-----------------------------------TSCEEEEEC----
T ss_pred CcccEEEEEEECCeEEEEEECCCCC-----------------------------------CEEEEEEECCCcc
Confidence 9 999984 67899999999764 5799999999864
No 31
>1ass_A Thermosome; chaperonin, HSP60, TCP1, groel, thermoplasma ACI ATP-binding; 2.30A {Thermoplasma acidophilum} SCOP: c.8.5.2 PDB: 1asx_A
Probab=99.83 E-value=1.3e-20 Score=168.65 Aligned_cols=127 Identities=19% Similarity=0.278 Sum_probs=110.1
Q ss_pred EEeeEEcccccCCCCccCccccchhccceeEEEeccccC-------------CHHh-----------HHHHHHHHHhcCC
Q 011794 125 EEGMEIDRGYISPQFVTNPEKLIVEFENARVLVTDQKIS-------------AIKD-----------IIPLLEKTTQLRA 180 (477)
Q Consensus 125 i~G~~~~~~~~~p~~~~~~~~~~~~~~~~~Ill~~~~i~-------------~~~~-----------l~~~l~~i~~~~~ 180 (477)
++|++|++++.+| +||+.++||||+++|++++ ++++ +..++++|.++|+
T Consensus 1 i~Gvv~~k~~~~~-------~mpk~i~nakI~ll~~~Le~~k~e~~~~v~i~~~~~~~~~~~~E~~~l~~~v~kI~~~g~ 73 (159)
T 1ass_A 1 MSGIVIDKEKVHS-------KMPDVVKNAKIALIDSALEIKKTEIEAKVQISDPSKIQDFLNQETNTFKQMVEKIKKSGA 73 (159)
T ss_dssp CCCEEESCCCSCT-------TSCSEEEEEEEEEESSCBSCCHHHHHHHHHTSCGGGHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred CceEEEecccCCC-------CCCcCcCCccEEEEecCcCCcccccceeEEECCHHHHHHHHHHHHHHHHHHhhhhhhCCC
Confidence 5799999999886 4788999999999999854 3443 3467889999999
Q ss_pred CEEEEeccccHHHHHHHHHhhhcccceEEEeeCCCcchhhhHHHHHHHHHhCceEecCCCCCcccCCCccCCccceEEEE
Q 011794 181 PLLIIAEDVTGEALATLVVNKLRGILNVAAIKAPGFGERRKALLQDIAIVTGAEFQAGDLGLLIENTSVEQLGTARKVTI 260 (477)
Q Consensus 181 ~lvi~~~~i~~~al~~l~~n~~~~~~~v~av~~~~~~~~~~~~l~~ia~~tGa~~~~~~~~~~~~~~~~~~lG~~~~v~~ 260 (477)
||||++++|++.++++|.++++ +|| +++++++|+|||++|||++++ ++++++++.||+|+.|+.
T Consensus 74 nVVl~~k~I~d~a~~~l~k~gI------~~v-----~~v~~~dleria~atGa~iv~-----~~~~l~~~~LG~~~~v~e 137 (159)
T 1ass_A 74 NVVLCQKGIDDVAQHYLAKEGI------YAV-----RRVKKSDMEKLAKATGAKIVT-----DLDDLTPSVLGEAETVEE 137 (159)
T ss_dssp SEEEESSCBCHHHHHHHHHTTC------EEE-----CSCCHHHHHHHHHHHTCCCBS-----STTSCCTTSCEEEEEEEE
T ss_pred eEEEECCccCHHHHHHHHHCCC------EEE-----ccCCHHHHHHHHHHhCCeeeC-----ccccCCcccCccceEEEE
Confidence 9999999999999999999885 554 677899999999999999999 899999999999999984
Q ss_pred ---ecccEEEEeCCCCh
Q 011794 261 ---RKDSTTIIADAASK 274 (477)
Q Consensus 261 ---~~~~~~~~~~~~~~ 274 (477)
+++++++|++|++.
T Consensus 138 ~~ig~~~~~~~~g~~~~ 154 (159)
T 1ass_A 138 RKIGDDRMTFVMGCKNH 154 (159)
T ss_dssp EEETTEEEEEEESCC--
T ss_pred EEECCeEEEEEECCCCc
Confidence 68899999999874
No 32
>1gtz_A 3-dehydroquinate dehydratase; lyase, type II dehydroquinase, shikimate pathway, dodecameric quaternary structure; HET: DHK; 1.6A {Streptomyces coelicolor} SCOP: c.23.13.1 PDB: 2bt4_A* 1v1j_A* 2cjf_A* 1d0i_A 1gu0_A 1gu1_A*
Probab=40.82 E-value=1.7e+02 Score=24.96 Aligned_cols=86 Identities=13% Similarity=0.176 Sum_probs=59.6
Q ss_pred hccceeEEEeccc-c-------------CCHHhHHHHHHH-HHhcCCCEEEEeccccHHHHHHHHHhhhcccceEEEeeC
Q 011794 149 EFENARVLVTDQK-I-------------SAIKDIIPLLEK-TTQLRAPLLIIAEDVTGEALATLVVNKLRGILNVAAIKA 213 (477)
Q Consensus 149 ~~~~~~Ill~~~~-i-------------~~~~~l~~~l~~-i~~~~~~lvi~~~~i~~~al~~l~~n~~~~~~~v~av~~ 213 (477)
.+++.+|+++|+| + .+.+++...|+. ..+.|..+-+.|.+-..+.++.+-... +....+++.+
T Consensus 3 ~~~~m~IlvlNGPNLNlLG~REP~iYG~~Tl~di~~~l~~~a~~~g~~v~~~QSN~EGeLId~Ih~a~--~~~dgiIINp 80 (156)
T 1gtz_A 3 SLANAPIMILNGPNLNLLGQAQPEIYGSDTLADVEALCVKAAAAHGGTVDFRQSNHEGELVDWIHEAR--LNHCGIVINP 80 (156)
T ss_dssp CTTTSCEEEEECTTGGGTTTSCHHHHCSCCHHHHHHHHHHHHHTTTCCEEEEECSCHHHHHHHHHHHH--HHCSEEEEEC
T ss_pred CccCceEEEEeCCCccccCCCCCCcCCCCCHHHHHHHHHHHHHHcCCEEEEEeeCCHHHHHHHHHHhh--hcCcEEEECc
Confidence 4566779999987 1 345666666654 455689999999999999999987653 2356678888
Q ss_pred CCcchhhhHHHHHHHHHhCceEe
Q 011794 214 PGFGERRKALLQDIAIVTGAEFQ 236 (477)
Q Consensus 214 ~~~~~~~~~~l~~ia~~tGa~~~ 236 (477)
.++-+.+-...+-|+...+..++
T Consensus 81 gA~THtSvAlrDAl~~v~~~P~V 103 (156)
T 1gtz_A 81 AAYSHTSVAILDALNTCDGLPVV 103 (156)
T ss_dssp TTHHHHCHHHHHHHHTSTTCCEE
T ss_pred hhhccccHHHHHHHHhcCCCCEE
Confidence 88777665555555544334444
No 33
>2q8p_A Iron-regulated surface determinant E; helical backbone metal receptor superfamily, metal transport; HET: HEM; 1.95A {Staphylococcus aureus subsp} PDB: 2q8q_A*
Probab=34.22 E-value=64 Score=29.31 Aligned_cols=58 Identities=5% Similarity=0.020 Sum_probs=36.0
Q ss_pred HHHHHhcCCCEEEEeccccHHHHHHHHHhhhcccceEEEeeCCCcchhhhHHHHHHHHHhCce
Q 011794 172 LEKTTQLRAPLLIIAEDVTGEALATLVVNKLRGILNVAAIKAPGFGERRKALLQDIAIVTGAE 234 (477)
Q Consensus 172 l~~i~~~~~~lvi~~~~i~~~al~~l~~n~~~~~~~v~av~~~~~~~~~~~~l~~ia~~tGa~ 234 (477)
+|++...+++|||......+.....|.+.+ +.++.+....+.++ .+.++.++.++|-.
T Consensus 53 ~E~i~~l~PDLIi~~~~~~~~~~~~L~~~g----ipvv~~~~~~~~~~-~~~i~~lg~~~g~~ 110 (260)
T 2q8p_A 53 VEAVKKLKPTHVLSVSTIKDEMQPFYKQLN----MKGYFYDFDSLKGM-QKSITQLGDQFNRK 110 (260)
T ss_dssp HHHHHHTCCSEEEEEGGGHHHHHHHHHHHT----SCCEEECCSSHHHH-HHHHHHHHHHTTCH
T ss_pred HHHHHhcCCCEEEecCccCHHHHHHHHHcC----CcEEEecCCCHHHH-HHHHHHHHHHhCCh
Confidence 677888899999987655555555564443 34555543333333 45677777777754
No 34
>1pq4_A Periplasmic binding protein component of AN ABC T uptake transporter; ZNUA, loop, metal-binding, metal binding protein; 1.90A {Synechocystis SP} SCOP: c.92.2.2 PDB: 2ov3_A 2ov1_A
Probab=30.08 E-value=1.9e+02 Score=27.15 Aligned_cols=49 Identities=4% Similarity=0.116 Sum_probs=38.6
Q ss_pred CCHHhHHHHHHHHHhcCCCEEEEeccccHHHHHHHHHhhhcccceEEEeeCC
Q 011794 163 SAIKDIIPLLEKTTQLRAPLLIIAEDVTGEALATLVVNKLRGILNVAAIKAP 214 (477)
Q Consensus 163 ~~~~~l~~~l~~i~~~~~~lvi~~~~i~~~al~~l~~n~~~~~~~v~av~~~ 214 (477)
.+++++..+++.+++.++++||+...+++.....+++.. +..++.+...
T Consensus 221 ps~~~l~~l~~~ik~~~v~~If~e~~~~~~~~~~ia~~~---g~~v~~ld~l 269 (291)
T 1pq4_A 221 PSAQELKQLIDTAKENNLTMVFGETQFSTKSSEAIAAEI---GAGVELLDPL 269 (291)
T ss_dssp CCHHHHHHHHHHHHTTTCCEEEEETTSCCHHHHHHHHHH---TCEEEEECTT
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEeCCCChHHHHHHHHHc---CCeEEEEcCc
Confidence 478899999999999999999999999998888886542 2445555443
No 35
>1n2z_A Vitamin B12 transport protein BTUF; HET: CNC PG4; 2.00A {Escherichia coli} SCOP: c.92.2.2 PDB: 2qi9_F* 4dbl_E 1n4a_A* 1n4d_A
Probab=25.74 E-value=99 Score=27.75 Aligned_cols=56 Identities=18% Similarity=0.199 Sum_probs=32.4
Q ss_pred HHHHHhcCCCEEEEec-cccHHHHHHHHHhhhcccceEEEeeCCCcchhhhHHHHHHHHHhC
Q 011794 172 LEKTTQLRAPLLIIAE-DVTGEALATLVVNKLRGILNVAAIKAPGFGERRKALLQDIAIVTG 232 (477)
Q Consensus 172 l~~i~~~~~~lvi~~~-~i~~~al~~l~~n~~~~~~~v~av~~~~~~~~~~~~l~~ia~~tG 232 (477)
+|++...+++|||... ..++.....|.+.+ +.++++....+.++ .+.++.++.++|
T Consensus 50 ~E~i~~l~PDLIi~~~~~~~~~~~~~L~~~g----ipvv~~~~~~~~~~-~~~i~~lg~~lg 106 (245)
T 1n2z_A 50 LERIVALKPDLVIAWRGGNAERQVDQLASLG----IKVMWVDATSIEQI-ANALRQLAPWSP 106 (245)
T ss_dssp HHHHHHTCCSEEEECTTTSCHHHHHHHHHHT----CCEEECCCCSHHHH-HHHHHHHGGGCS
T ss_pred HHHHhccCCCEEEEeCCCCcHHHHHHHHHCC----CcEEEeCCCCHHHH-HHHHHHHHHHhC
Confidence 6888889999999853 35566666665443 34555543222222 344555555444
No 36
>2ooa_A E3 ubiquitin-protein ligase CBL-B; alpha-helical domain; 1.56A {Homo sapiens} PDB: 2oob_A 2jnh_A 2do6_A
Probab=22.85 E-value=1.7e+02 Score=20.06 Aligned_cols=36 Identities=14% Similarity=-0.066 Sum_probs=26.6
Q ss_pred HHHHHHHhCCCChHHHHHHHHHHH---HHHHHHHHhccc
Q 011794 36 KLGLLSVTSGANPVSLKRGIDKTV---HGLVEELEKRAR 71 (477)
Q Consensus 36 ~~~~~li~~gi~p~~I~~g~~~a~---~~~~~~L~~~s~ 71 (477)
.+..+|+..|++...++++++.+- +.+..+|.+...
T Consensus 13 ~~Ia~Lm~mGFsr~~ai~AL~~a~nnve~AaniLlef~~ 51 (52)
T 2ooa_A 13 AKIAKLMGEGYAFEEVKRALEIAQNNVEVARSILREFAF 51 (52)
T ss_dssp HHHHHHHHTTCCHHHHHHHHHHTTTCHHHHHHHHHHHCC
T ss_pred HHHHHHHHcCCCHHHHHHHHHHhCCCHHHHHHHHHHhcC
Confidence 456788899999999999998875 345556655543
No 37
>1s3l_A Hypothetical protein MJ0936; phosphodiesterase, nuclease, structural genomics, BSGC struc funded by NIH; 2.40A {Methanocaldococcus jannaschii} SCOP: d.159.1.7 PDB: 1s3m_A 1s3n_A 2ahd_A
Probab=22.22 E-value=1.4e+02 Score=25.79 Aligned_cols=53 Identities=9% Similarity=0.091 Sum_probs=32.9
Q ss_pred ccchhccc-eeEEEeccccCCHHhHHHHHHHHHhcCCCEEEEeccc-cHHHHHHH
Q 011794 145 KLIVEFEN-ARVLVTDQKISAIKDIIPLLEKTTQLRAPLLIIAEDV-TGEALATL 197 (477)
Q Consensus 145 ~~~~~~~~-~~Ill~~~~i~~~~~l~~~l~~i~~~~~~lvi~~~~i-~~~al~~l 197 (477)
..+..+.. .||+++...-.+.+.+..+++.+.+.++++|++.+++ +++.+..|
T Consensus 17 ~~~~~~~g~m~i~~iSD~Hg~~~~l~~~l~~~~~~~~D~ii~~GDl~~~~~~~~l 71 (190)
T 1s3l_A 17 TENLYFQGHMKIGIMSDTHDHLPNIRKAIEIFNDENVETVIHCGDFVSLFVIKEF 71 (190)
T ss_dssp ---------CEEEEECCCTTCHHHHHHHHHHHHHSCCSEEEECSCCCSTHHHHHG
T ss_pred ccChhhcCCeEEEEEeeCCCCHHHHHHHHHHHhhcCCCEEEECCCCCCHHHHHHH
Confidence 35566776 7888765544556667777887777889999999997 45555555
No 38
>4hn9_A Iron complex transport system substrate-binding P; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 1.85A {Eubacterium eligens}
Probab=22.13 E-value=1.6e+02 Score=27.93 Aligned_cols=57 Identities=7% Similarity=0.056 Sum_probs=37.2
Q ss_pred HHHHHhcCCCEEEEeccccHHHHHHHHHhhhcccceEEEeeCCCcchhhhHHHHHHHHHhCce
Q 011794 172 LEKTTQLRAPLLIIAEDVTGEALATLVVNKLRGILNVAAIKAPGFGERRKALLQDIAIVTGAE 234 (477)
Q Consensus 172 l~~i~~~~~~lvi~~~~i~~~al~~l~~n~~~~~~~v~av~~~~~~~~~~~~l~~ia~~tGa~ 234 (477)
+|+|...+++|||.... .......|.+.+ +.++++....+.++ .+.++.|+.++|-.
T Consensus 109 ~E~i~al~PDLIi~~~~-~~~~~~~L~~~g----ipvv~~~~~~~~~~-~~~i~~lg~~lg~e 165 (335)
T 4hn9_A 109 TEACVAATPDVVFLPMK-LKKTADTLESLG----IKAVVVNPEDQSLL-EECITLVGKITNNA 165 (335)
T ss_dssp HHHHHHTCCSEEEEEGG-GHHHHHHHHHTT----CCEEEECCCSHHHH-HHHHHHHHHHTTCH
T ss_pred HHHHHhcCCCEEEEeCc-chhHHHHHHHcC----CCEEEEcCCCHHHH-HHHHHHHHHHcCCH
Confidence 68888899999988765 445555554433 46777654334343 46777888888754
No 39
>3md9_A Hemin-binding periplasmic protein HMUT; transport protein, alpha beta protein, rigid helical backbon substrate-free, heme transport; 1.50A {Yersinia pestis} PDB: 3nu1_A*
Probab=21.48 E-value=2.3e+02 Score=25.32 Aligned_cols=58 Identities=12% Similarity=0.174 Sum_probs=38.5
Q ss_pred HHHHHhcCCCEEEEecccc-HHHHHHHHHhhhcccceEEEeeC-CCcchhhhHHHHHHHHHhCce
Q 011794 172 LEKTTQLRAPLLIIAEDVT-GEALATLVVNKLRGILNVAAIKA-PGFGERRKALLQDIAIVTGAE 234 (477)
Q Consensus 172 l~~i~~~~~~lvi~~~~i~-~~al~~l~~n~~~~~~~v~av~~-~~~~~~~~~~l~~ia~~tGa~ 234 (477)
+|++.+.+++|||...... ......|.+.+ +.++.+.. ..+.++ .+.++.++.++|-.
T Consensus 52 ~E~i~~l~PDlIi~~~~~~~~~~~~~L~~~g----ipvv~~~~~~~~~~~-~~~i~~lg~~~g~~ 111 (255)
T 3md9_A 52 AEGILAMKPTMLLVSELAQPSLVLTQIASSG----VNVVTVPGQTTPESV-AMKINAVATALHQT 111 (255)
T ss_dssp HHHHHTTCCSEEEEETTCSCHHHHHHHHHTT----CEEEEECCCCSHHHH-HHHHHHHHHHHTCH
T ss_pred HHHHHccCCCEEEEcCCcCchhHHHHHHHcC----CcEEEeCCCCCHHHH-HHHHHHHHHHhCCH
Confidence 6888899999999887654 45566664433 45666642 233333 46788888888864
No 40
>2r7a_A Bacterial heme binding protein; periplasmic binding protein, heme transport, transport protein; HET: HEM; 2.05A {Shigella dysenteriae} PDB: 2rg7_A
Probab=20.23 E-value=2.5e+02 Score=25.10 Aligned_cols=58 Identities=21% Similarity=0.165 Sum_probs=35.8
Q ss_pred HHHHHhcCCCEEEEecc-ccHHHHHHHHHhhhcccceEEEeeCC--CcchhhhHHHHHHHHHhCce
Q 011794 172 LEKTTQLRAPLLIIAED-VTGEALATLVVNKLRGILNVAAIKAP--GFGERRKALLQDIAIVTGAE 234 (477)
Q Consensus 172 l~~i~~~~~~lvi~~~~-i~~~al~~l~~n~~~~~~~v~av~~~--~~~~~~~~~l~~ia~~tGa~ 234 (477)
+|++...+++|||.... ........|.+.+ +.++++..+ .+.++ .+.++.++.++|-.
T Consensus 52 ~E~i~~l~PDLIi~~~~~~~~~~~~~L~~~g----ipvv~~~~~~~~~~~~-~~~i~~lg~~~g~~ 112 (256)
T 2r7a_A 52 SEGILSLRPDSVITWQDAGPQIVLDQLRAQK----VNVVTLPRVPATLEQM-YANIRQLAKTLQVP 112 (256)
T ss_dssp HHHHHTTCCSEEEEETTCSCHHHHHHHHHTT----CEEEEECCCSCCHHHH-HHHHHHHHHHTTCH
T ss_pred HHHHHccCCCEEEEcCCCCCHHHHHHHHHcC----CcEEEecCCCCCHHHH-HHHHHHHHHHhCCH
Confidence 68888899999998764 3455666665443 356665422 23333 35677777777643
Done!