BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>011797
MAQIRMNRRSLAAAVAVWMVFLGLIMMEKLSNAERLLKDKDPQVFADEKETRPGFLCRVA
HFLWQSGESSYEPVWPEMQFGWKVVVGSIVGFFGAALGSVGGVGGGGIFVPMLTLIIGFD
PKSATAISKCMIMGAAGSTVYYNLRLRHPTLDMPLIDYDLALLFQPMLMLGISIGVAFNV
MFADWMVTVLLIILFIGTSTKALFKGIDTWKKETMMKKEAAKVLESESKAADVDGQDYKQ
LPSGPSTVHDEEVPIIKNIYWKELSLLLYVWLGFLAVQLAKEYVVPCSITYWILNALQVP
IAVSVALFEAICLYKGTRVIASKGKEITNWKIHQIVFYCFCGIVAGMVGGLLGLGGGFIL
GPLFLELGIPPQVASATSTFAMTFSSSMSVVQYYLLDRFPVPYAAFFTLVATFAAFAGQH
VVRKIIAVLGRASIIVFILALTIFVSAISLGGFGIENMVKKLKNQEYMGFENLCQIS

High Scoring Gene Products

Symbol, full name Information P value
AT2G25737 protein from Arabidopsis thaliana 2.9e-110
AT1G11540 protein from Arabidopsis thaliana 3.5e-27
AT1G61740 protein from Arabidopsis thaliana 4.9e-24
AT4G21250 protein from Arabidopsis thaliana 1.1e-20
AT4G21260 protein from Arabidopsis thaliana 4.6e-14
DDB_G0269644 gene from Dictyostelium discoideum 5.1e-14

The BLAST search returned 1 gene product which did not match your query constraints. Please see the full BLAST report below for the details.

Back to top

Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  011797
        (477 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:504956017 - symbol:AT2G25737 species:3702 "Ara...  1089  2.9e-110  1
TAIR|locus:2040605 - symbol:AT2G36630 species:3702 "Arabi...   734  1.2e-72   1
TAIR|locus:2200061 - symbol:AT1G11540 "AT1G11540" species...   305  3.5e-27   1
TAIR|locus:2195773 - symbol:AT1G61740 species:3702 "Arabi...   244  4.9e-24   2
TAIR|locus:2127343 - symbol:AT4G21250 "AT4G21250" species...   262  1.1e-20   1
TAIR|locus:2127348 - symbol:AT4G21260 "AT4G21260" species...   144  4.6e-14   3
DICTYBASE|DDB_G0269644 - symbol:DDB_G0269644 species:4468...   177  5.1e-14   2


>TAIR|locus:504956017 [details] [associations]
            symbol:AT2G25737 species:3702 "Arabidopsis thaliana"
            [GO:0009507 "chloroplast" evidence=ISM] [GO:0016021 "integral to
            membrane" evidence=IEA] InterPro:IPR002781 Pfam:PF01925
            GO:GO:0016021 EMBL:CP002685 GenomeReviews:CT485783_GR
            eggNOG:NOG119684 HOGENOM:HOG000238346 EMBL:AY136387 EMBL:BT002106
            EMBL:BT005381 EMBL:AK117723 IPI:IPI00518569 RefSeq:NP_850068.1
            UniGene:At.44601 EnsemblPlants:AT2G25737.1 GeneID:817116
            KEGG:ath:AT2G25737 TAIR:At2g25737 InParanoid:Q8L7A0 OMA:FMIFVSA
            ProtClustDB:CLSN2690916 Genevestigator:Q8L7A0 Uniprot:Q8L7A0
        Length = 476

 Score = 1089 (388.4 bits), Expect = 2.9e-110, P = 2.9e-110
 Identities = 224/481 (46%), Positives = 295/481 (61%)

Query:     1 MAQIRMNRRSLAAAVAVWMVFLGLIMMEKLSNAERLLKDKDPQVFADE-KETRPGFLCRV 59
             M ++R     L + V ++++   L       +AER  + K  ++  DE +E    F  + 
Sbjct:     1 MTKLRSKWLGLRS-VTIFLINFSLAFA--FVSAER--RGKSLRLSTDETRENESSFFLKA 55

Query:    60 AHFLWQSGESSYEPVWPEMQFGWKVVVGSIXXXXXXXXXXXXXXXXXXXXXPMLTLIIGF 119
              +FLW+S +  Y  VWPE +F W++V+G++                     PML+LIIGF
Sbjct:    56 INFLWESDQIGYRHVWPEFEFNWQIVLGTLVGFFGAAFGSVGGVGGGGIFVPMLSLIIGF 115

Query:   120 DPKSATAISKCMIMGAAGSTVYYNLRLRHPTLDMPLIDYDLALLFQPMLMLGISIGVAFN 179
             DPKSATAISKCMIMGA+ STVYYNLRLRHPTLDMP+IDYDLALL QPMLMLGISIGVAFN
Sbjct:   116 DPKSATAISKCMIMGASVSTVYYNLRLRHPTLDMPIIDYDLALLIQPMLMLGISIGVAFN 175

Query:   180 VMFADWMVTVLLIILFIGTSTKALFKGIDXXXXXXXXXXXXXXVLESES-KAADVDGQDY 238
             V+F DW+VTVLLI+LF+GTSTKA  KG +               LES      +V+   Y
Sbjct:   176 VIFPDWLVTVLLIVLFLGTSTKAFLKGSETWNKETIEKKEAAKRLESNGVSGTEVE---Y 232

Query:   239 KQLPSGPST----VHDEEVPIIKNIYWKELSLLLYVWLGFLAVQLAKEYVVPCSITYWIL 294
               LP+ PST       EEV II+N+YWKEL LL++VW+ FLA+Q++K+ +  CS+ YW++
Sbjct:   233 VPLPAAPSTNPGNKKKEEVSIIENVYWKELGLLVFVWIVFLALQISKQNLANCSVAYWVI 292

Query:   295 NALQVPIAVSVALFEAICLYKGTRVIASKGKEITNWKIHQIVFYCFCGIVAGMVXXXXXX 354
             N LQ+P+AV V+ +EA+ LY+G R+IASKG+  +N+ + Q+V YC  GI+AG+V      
Sbjct:   293 NLLQIPVAVGVSGYEAVALYQGRRIIASKGQGDSNFTVGQLVMYCTFGIIAGIVGGLLGL 352

Query:   355 XXXXXXXXXXXXXXXXPQXXXXXXXXXXXXXXXXXXXQYYLLDRFPVPYXXXXXXXXXXX 414
                             PQ                   +YYLL RFPVPY           
Sbjct:   353 GGGFIMGPLFLELGVPPQVSSATATFAMTFSSSMSVVEYYLLKRFPVPYALYLVGVATIA 412

Query:   415 XXXGQHVVRKIIAVLGRASIIVFILALTIFVSAISLGGFGIENMVKKLKNQEYMGFENLC 474
                GQHVVR++IA +GRAS+I+FILA  IF+SAISLGG GI NM+ K++  EYMGFENLC
Sbjct:   413 AWVGQHVVRRLIAAIGRASLIIFILASMIFISAISLGGVGIVNMIGKIQRHEYMGFENLC 472

Query:   475 Q 475
             +
Sbjct:   473 K 473


>TAIR|locus:2040605 [details] [associations]
            symbol:AT2G36630 species:3702 "Arabidopsis thaliana"
            [GO:0016021 "integral to membrane" evidence=IEA] InterPro:IPR002781
            Pfam:PF01925 GO:GO:0016021 EMBL:CP002685 GenomeReviews:CT485783_GR
            HOGENOM:HOG000238346 EMBL:AY075669 EMBL:AY133633 IPI:IPI00516320
            RefSeq:NP_850267.1 UniGene:At.43254 PRIDE:Q8S9J0
            EnsemblPlants:AT2G36630.1 GeneID:818235 KEGG:ath:AT2G36630
            TAIR:At2g36630 eggNOG:NOG83485 InParanoid:Q8S9J0 OMA:VMMFSSS
            PhylomeDB:Q8S9J0 ProtClustDB:CLSN2680076 Genevestigator:Q8S9J0
            Uniprot:Q8S9J0
        Length = 459

 Score = 734 (263.4 bits), Expect = 1.2e-72, P = 1.2e-72
 Identities = 158/426 (37%), Positives = 232/426 (54%)

Query:    59 VAHFLWQSGESSYEPVWPEMQFGWKVVVGSIXXXXXXXXXXXXXXXXXXXXXPMLTLIIG 118
             + H L  S  S+ E +WP+++F WK+V+ ++                     PMLTLI+G
Sbjct:    37 IHHHL--SSLSATEKIWPDLKFSWKLVLATVIAFLGSACGTVGGVGGGGIFVPMLTLILG 94

Query:   119 FDPKSATAISKCMIMGAAGSTVYYNLRLRHPTLDMPLIDYDLALLFQPMLMLGISIGVAF 178
             FD KSA AISKCMIMGA+ S+V+YN+R+RHPT ++P++DYDLALLFQPML+LGI++GV+ 
Sbjct:    95 FDTKSAAAISKCMIMGASASSVWYNVRVRHPTKEVPILDYDLALLFQPMLLLGITVGVSL 154

Query:   179 NVMFADWMVTVLLIILFIGTSTKALFKGIDXXXXXXXXXXXXXXVLESESKAADVDGQ-- 236
             +V+F  W++TVL+IILF+GTS+++ FKGI+              + +  +   +  G+  
Sbjct:   155 SVVFPYWLITVLIIILFVGTSSRSFFKGIEMWKEETLLKNE---MAQQRANMVNSRGELL 211

Query:   237 -DYKQLPSGPSTVHDEEVPIIK-NIYWKELSLLLYVWLGFLAVQLAKEYVVPCSITYWIL 294
              D +  P  P      E+ II+ N+ WK L +L+ VWL FL +Q+ K  +  CS  YWIL
Sbjct:   212 IDTEYEPLYPRE-EKSELEIIRSNLKWKGLLILVTVWLTFLLIQIVKNEIKVCSTIYWIL 270

Query:   295 NALQVPIAVSVALFEAICLYKGTRVIASKGK-----EIT-NWKIHQIVFYCFCGIVAGMV 348
               +Q P+A++V  FEA  LY   +   + G      E T  W    ++F   CG++ G+V
Sbjct:   271 FIVQFPVALAVFGFEASKLYTANKKRLNSGNTECICEATIEWTPLSLIFCGLCGLIGGIV 330

Query:   349 XXXXXXXXXXXXXXXXXXXXXXPQXXXXXXXXXXXXXXXXXXXQYYLLDRFPVPYXXXXX 408
                                   PQ                   ++YLL RFP+PY     
Sbjct:   331 GGLLGSGGGFVLGPLLLEIGVIPQVASATATFVMMFSSSLSVVEFYLLKRFPIPYAMYLI 390

Query:   409 XXXXXXXXXGQHVVRKIIAVLGRASIIVFILALTIFVSAISLGGFGIENMVKKLKNQEYM 468
                      GQ  +RK++A+L RASIIVF+L+  I  SA+++G  GIE  +K + N E+M
Sbjct:   391 SVSILAGFWGQSFIRKLVAILRRASIIVFVLSGVICASALTMGVIGIEKSIKMIHNHEFM 450

Query:   469 GFENLC 474
             GF   C
Sbjct:   451 GFLGFC 456


>TAIR|locus:2200061 [details] [associations]
            symbol:AT1G11540 "AT1G11540" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
            "biological_process" evidence=ND] [GO:0016021 "integral to
            membrane" evidence=IEA] [GO:0010167 "response to nitrate"
            evidence=RCA] [GO:0015706 "nitrate transport" evidence=RCA]
            InterPro:IPR002781 Pfam:PF01925 GO:GO:0016021 EMBL:CP002684
            UniGene:At.11326 UniGene:At.63949 IPI:IPI00525245
            RefSeq:NP_172621.2 PRIDE:F4I8X6 EnsemblPlants:AT1G11540.1
            GeneID:837697 KEGG:ath:AT1G11540 OMA:WNLESER Uniprot:F4I8X6
        Length = 367

 Score = 305 (112.4 bits), Expect = 3.5e-27, P = 3.5e-27
 Identities = 99/380 (26%), Positives = 158/380 (41%)

Query:   113 LTLIIGFDPKSATAISKCMIMGAAGSTVYYNLRLRHP-TLDMPLIDYDLALLFQPMLMLG 171
             +T+I G + K+A++ S  M+ G + + V  NL LR+P + D  LID+DLAL  QP L+LG
Sbjct:     1 MTIIAGLEMKTASSFSAFMVTGVSFANVGCNLFLRNPKSRDKTLIDFDLALTIQPCLLLG 60

Query:   172 ISIGVAFNVMFADWMVTVLLIILFIGTSTKALFKGIDXXXXXXXXXXXXXXVLESESKAA 231
             +SIGV  N MF +W+V  L  +    ++ K   KG+                ++S     
Sbjct:    61 VSIGVICNRMFPNWLVLFLFAVFLAWSTMKTCKKGVSYWNLESERAK-----IKSPR--- 112

Query:   232 DVDGQDYKQLPSGPSTVHDEEVPIIKNIYWKELSLLLYVWLGFLAVQLAK--EY------ 283
             DVDG +  + P       D     +    W +L +L+ +WL F ++ L +  +Y      
Sbjct:   113 DVDGIEVARSPLLSEEREDVRQRGMIRFPWMKLGVLVIIWLLFFSINLFRGNKYGQGIIS 172

Query:   284 VVPCSITYWILNALQVPIAVSVALFEAICLYKGTRVIASKGKEITNWKIHQI-------- 335
             + PC   YW L++LQ+P+ +    F  +C+Y    V  S     +N    Q         
Sbjct:   173 IKPCGALYWFLSSLQIPLTI----FFTLCIYFSDNV-QSNHTSHSNQNSEQETGVGGRQN 227

Query:   336 -VFYCFCGIVAGMVXXXXXXXXXXXXXXXXXXXXXXPQXXXXXXXXXXXXXXXXXXXQYY 394
              +      ++AG++                      P+                   QY 
Sbjct:   228 KLMLPVMALLAGVLGGLFGIGGGMLISPLLLQIGIAPEVTAATCSFMVLFSSSMSAIQYL 287

Query:   395 LLDRFPVPYXXXXXXXXXXXXXXGQHVVRKIIAVLGRASIIVFILALTIFVSAISLGGFG 454
             LL                     G  VV+K+IA  GRASIIVF + + + +S + +   G
Sbjct:   288 LLGMEHAGTAAIFALVCFVASLVGLMVVKKVIAKYGRASIIVFAVGIVMALSTVLMTTHG 347

Query:   455 IENMVKKLKNQEYMGFENLC 474
               N+     +  YMGF+  C
Sbjct:   348 AFNVWNDFVSGRYMGFKLPC 367


>TAIR|locus:2195773 [details] [associations]
            symbol:AT1G61740 species:3702 "Arabidopsis thaliana"
            [GO:0009507 "chloroplast" evidence=ISM] [GO:0006612 "protein
            targeting to membrane" evidence=RCA] [GO:0009963 "positive
            regulation of flavonoid biosynthetic process" evidence=RCA]
            [GO:0010363 "regulation of plant-type hypersensitive response"
            evidence=RCA] InterPro:IPR002781 Pfam:PF01925 GO:GO:0016021
            EMBL:CP002684 EMBL:AC005882 OMA:VICNLVF HOGENOM:HOG000238346
            EMBL:AF325103 EMBL:BT026498 IPI:IPI00542265 PIR:B96643
            RefSeq:NP_176367.1 UniGene:At.23611 IntAct:Q9SYB0 PRIDE:Q9SYB0
            EnsemblPlants:AT1G61740.1 GeneID:842471 KEGG:ath:AT1G61740
            TAIR:At1g61740 InParanoid:Q9SYB0 PhylomeDB:Q9SYB0
            ProtClustDB:CLSN2719057 Genevestigator:Q9SYB0 Uniprot:Q9SYB0
        Length = 458

 Score = 244 (91.0 bits), Expect = 4.9e-24, Sum P(2) = 4.9e-24
 Identities = 62/211 (29%), Positives = 109/211 (51%)

Query:   111 PMLTLIIGFDPKSATAISKCMIMGAAGSTVYYNLRLRHPTLD-MPLIDYDLALLFQPMLM 169
             P++T++ G D K+A++ S  M+ G + + V  NL +R+P      LID+DLALL +P ++
Sbjct:    86 PIMTIVAGLDLKTASSFSAFMVTGGSIANVGCNLFVRNPKSGGKTLIDFDLALLLEPCML 145

Query:   170 LGISIGVAFNVMFADWMVTVLLIILFIGTSTKALFKGIDXXXXXXXXXXXXXXVLESESK 229
             LG+SIGV  N++F +W++T L  +    ++ K    G+               V   ES 
Sbjct:   146 LGVSIGVICNLVFPNWLITSLFAVFLAWSTLKTFGNGL------YYWRLESEMVKIRESN 199

Query:   230 AADVDGQDYKQLPSGPSTVHDEEVPIIKNIYWKELSLLLYVWLGFLAVQLAK--EY---- 283
               + D ++ K        + D + P  K   W +L +L+ +WL + AV L +  +Y    
Sbjct:   200 RIEEDDEEDKIESLKLPLLEDYQRP--KRFPWIKLGVLVIIWLSYFAVYLLRGNKYGEGI 257

Query:   284 --VVPCSITYWILNALQVPIAVSVALFEAIC 312
               + PC   YW++++ Q+P+ +   L+  IC
Sbjct:   258 ISIEPCGNAYWLISSSQIPLTLFFTLW--IC 286

 Score = 90 (36.7 bits), Expect = 4.9e-24, Sum P(2) = 4.9e-24
 Identities = 20/57 (35%), Positives = 33/57 (57%)

Query:   418 GQHVVRKIIAVLGRASIIVFILALTIFVSAISLGGFGIENMVKKLKNQEYMGFENLC 474
             G  VV+K+I   GRASIIVF + + + +S + +  +G  ++     +  YMGF+  C
Sbjct:   402 GLKVVQKVITEYGRASIIVFSVGIVMALSIVLMTSYGALDVWNDYVSGRYMGFKLPC 458


>TAIR|locus:2127343 [details] [associations]
            symbol:AT4G21250 "AT4G21250" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
            "biological_process" evidence=ND] [GO:0016021 "integral to
            membrane" evidence=IEA] InterPro:IPR002781 Pfam:PF01925
            GO:GO:0016021 EMBL:CP002687 IPI:IPI00525325 RefSeq:NP_193857.3
            UniGene:At.50360 PRIDE:F4JIP9 EnsemblPlants:AT4G21250.1
            GeneID:827874 KEGG:ath:AT4G21250 OMA:LINYQYL Uniprot:F4JIP9
        Length = 449

 Score = 262 (97.3 bits), Expect = 1.1e-20, P = 1.1e-20
 Identities = 100/443 (22%), Positives = 173/443 (39%)

Query:    48 EKETRPGFLCRVAHFLWQSGESSYEPVWPEMQFGWKVVVGSIXXXXXXXXXXXXXXXXXX 107
             E+E  P     + H + Q   S  E    E++    +++  +                  
Sbjct:    22 EEENLPQSHHNLLHKVQQWRTSLKESSAAELKLSSAIIMAGVLCFLAALISSAGGIGGGG 81

Query:   108 XXXPMLTLIIGFDPKSATAISKCMIMGAAGSTVYYNLRLRHPTLDMPLIDYDLALLFQPM 167
                P++T++ G D K+A++ S  M+ G + + V  NL          L+DYDLALL +P 
Sbjct:    82 LFIPIMTIVAGVDLKTASSFSAFMVTGGSIANVISNL-----FGGKALLDYDLALLLEPC 136

Query:   168 LMLGISIGVAFNVMFADWMVTVLLIILFIGTSTKALFKGIDXXXXXXXXXXXXXXVLESE 227
             ++LG+SIGV  N +  +W++TVL  +    +S K    G+                    
Sbjct:   137 MLLGVSIGVICNRVLPEWLITVLFAVFLAWSSLKTCRSGVKFWKLESEIARESGHGRPER 196

Query:   228 SKAA-DVDGQDYKQ-LPSGPSTVHDEEVPIIKNIYWKELSLLLYVWLGFLAVQLAKEY-- 283
              +   + + ++ K  L    +T +  ++P      W +L +L+ VW  F  + L +    
Sbjct:   197 GQGQIEEETKNLKAPLLEAQATKNKSKIP------WTKLGVLVIVWASFFVIYLLRGNKD 250

Query:   284 ------VVPCSITYWILNALQVPIAVSVALFEAICLYKG-TRVIAS----KGKEITNW-K 331
                   + PC + YWIL +LQ+P+A+   +F  + L +  +R   S    K +E T   K
Sbjct:   251 GKGIITIKPCGVEYWILLSLQIPLAL---IFTKLALSRTESRQEQSPNDQKNQEGTRLDK 307

Query:   332 IHQIVFYCFCGIVAGMVXXXXXXXXXXXXXXXXXXXXXXPQXXXXXXXXXXXXXXXXXXX 391
               ++ F      +AG++                      PQ                   
Sbjct:   308 STRLKFPAM-SFLAGLLGGIFGIGGGMLISPLLLQSGIPPQITAATTSFMVFFSATMSAV 366

Query:   392 QYYLLDRFPVPYXXXXXXXXXXXXXXGQHVVRKIIAVLGRASIIVFILALTIFVSAISLG 451
             QY LL                     G  +V+K +A  GRASIIVF +   + +S + + 
Sbjct:   367 QYLLLGMQNTDTAYVFSFICFLASLLGLVLVQKAVAQFGRASIIVFSVGTVMSLSTVLMT 426

Query:   452 GFGIENMVKKLKNQEYMGFENLC 474
              FG  ++       + MGF+  C
Sbjct:   427 SFGALDVWTDYVAGKDMGFKLPC 449


>TAIR|locus:2127348 [details] [associations]
            symbol:AT4G21260 "AT4G21260" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
            "biological_process" evidence=ND] [GO:0016021 "integral to
            membrane" evidence=IEA] InterPro:IPR002781 Pfam:PF01925
            GO:GO:0016021 EMBL:CP002687 GenomeReviews:CT486007_GR EMBL:AL161554
            EMBL:AL021960 IPI:IPI00520516 PIR:T04957 RefSeq:NP_193858.1
            UniGene:At.54453 EnsemblPlants:AT4G21260.1 GeneID:827875
            KEGG:ath:AT4G21260 TAIR:At4g21260 eggNOG:NOG259940
            HOGENOM:HOG000238346 InParanoid:O49567 PhylomeDB:O49567
            ArrayExpress:O49567 Genevestigator:O49567 Uniprot:O49567
        Length = 393

 Score = 144 (55.7 bits), Expect = 4.6e-14, Sum P(3) = 4.6e-14
 Identities = 34/89 (38%), Positives = 52/89 (58%)

Query:   118 GFDPKSATAISKCMIMGAAGSTVYYNLRLRHPTLDMPLIDYDLALLFQPMLMLGISIGVA 177
             G D K+A++ S  M+ G  GS    NL   H      LIDYDLALL +P ++LG+S+GV 
Sbjct:    80 GIDLKAASSFSAFMVTG--GSIA--NLINNHFGCKK-LIDYDLALLLEPCMLLGVSVGVI 134

Query:   178 FNVMFADWMVTVLLIILFIGTSTKALFKG 206
              N +F +W++T L ++  + +S +    G
Sbjct:   135 CNKVFPEWLITGLFVVFLMWSSMETCENG 163

 Score = 76 (31.8 bits), Expect = 4.6e-14, Sum P(3) = 4.6e-14
 Identities = 14/30 (46%), Positives = 20/30 (66%)

Query:   274 FLAVQLAKEYVVPCSITYWILNALQVPIAV 303
             FL   L    + PCS+ YWIL +LQ+P+A+
Sbjct:   212 FLGRNLGIISIKPCSVEYWILLSLQIPLAL 241

 Score = 68 (29.0 bits), Expect = 4.6e-14, Sum P(3) = 4.6e-14
 Identities = 24/106 (22%), Positives = 39/106 (36%)

Query:   371 PQXXXXXXXXXXXXXXXXXXXQYYLLDRFPVPYXXXXXXXXXXXXXXGQHVVRKIIAVLG 430
             PQ                   QY LL                     G    +K++    
Sbjct:   290 PQVTAATTSFMVFFSATMSGVQYLLLGMQNTEAAYVFSVICFFASTLGLVFAQKVVPHFR 349

Query:   431 RASIIVFILALTIFVSAISLGGFGIENMVKKLKNQ--EYMGFENLC 474
             RASIIVF++   ++++ I +  FGI  +V  + N   + +GF+  C
Sbjct:   350 RASIIVFLVGTMMYLTTIVMASFGI--LVFYIDNDAGKDIGFQLPC 393


>DICTYBASE|DDB_G0269644 [details] [associations]
            symbol:DDB_G0269644 species:44689 "Dictyostelium
            discoideum" [GO:0016021 "integral to membrane" evidence=IEA]
            [GO:0044351 "macropinocytosis" evidence=RCA] InterPro:IPR002781
            Pfam:PF01925 dictyBase:DDB_G0269644 GO:GO:0016021 EMBL:AAFI02000005
            RefSeq:XP_646141.1 EnsemblProtists:DDB0190426 GeneID:8617091
            KEGG:ddi:DDB_G0269644 eggNOG:NOG119684 InParanoid:Q55DJ0
            OMA:VICNLVF Uniprot:Q55DJ0
        Length = 549

 Score = 177 (67.4 bits), Expect = 5.1e-14, Sum P(2) = 5.1e-14
 Identities = 37/98 (37%), Positives = 56/98 (57%)

Query:   111 PMLTLIIGFDPKSATAISKCMIMGAAGSTVYYNLRLRHPTLDMPLIDYDLALLFQPMLML 170
             P+L L+  +DPK+A  +S C++ G A +    N   RHP  +  LIDY +ALL +P+ + 
Sbjct:   163 PILILVSKWDPKTAIPLSNCLVAGCALANFIQNFPRRHPFSNKHLIDYSVALLIEPLTLA 222

Query:   171 GISIGVAFNVMFADWMVTVLLIILFIGTSTKALFKGID 208
             G   GV  +  F   ++ +LL+I    TS K + KGID
Sbjct:   223 GTIFGVYLHTYFPPLVILLLLVITLGFTSYKTISKGID 260

 Score = 76 (31.8 bits), Expect = 5.1e-14, Sum P(2) = 5.1e-14
 Identities = 36/191 (18%), Positives = 61/191 (31%)

Query:   287 CSITYWILNALQVPIAVSVALFEAICLYKGTRVIASKGKEITN---WKIHQIVFYCFCGI 343
             CS  YWIL+ + VP+ +      A  L +       +G+EI     +    I+      +
Sbjct:   355 CSPVYWILSFVMVPVIIIAWGITAKFLMREYEKKKEEGREIEGEIKYTYKNILLLGILSV 414

Query:   344 VAGMVXXXXXXXXXXXXXXXXXXXXXXPQXXXXXXXXXXXXXXXXXXXQYYLLDRFPVPY 403
             +AG +                      P                    QY L+ +    Y
Sbjct:   415 IAGCLASLLGIGGGMIKGPVLLQMGLVPDVTAATSSYMILFTSASSAIQYILVGKLRWDY 474

Query:   404 XXXXXXXXXXXXXXGQHVVRKIIAVLGRASIIVFILALTIFVSAISLGGFGIENMVKKLK 463
                           G   +  I+    R S IVF++   I  S I L    I   +  +K
Sbjct:   475 GIVYYVIGFVSCFIGTQTLIWIVKKYQRRSYIVFLIGFVITFSTILLV---ITESIDFVK 531

Query:   464 NQEYMGFENLC 474
              +  + F+++C
Sbjct:   532 YRN-LTFDSIC 541


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.327   0.141   0.433    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      477       387   0.00093  117 3  11 22  0.44    33
                                                     34  0.45    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  7
  No. of states in DFA:  617 (66 KB)
  Total size of DFA:  255 KB (2135 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  26.60u 0.12s 26.72t   Elapsed:  00:00:01
  Total cpu time:  26.60u 0.12s 26.72t   Elapsed:  00:00:01
  Start:  Sat May 11 14:15:43 2013   End:  Sat May 11 14:15:44 2013

Back to top