Query 011797
Match_columns 477
No_of_seqs 307 out of 2195
Neff 6.9
Searched_HMMs 13730
Date Mon Mar 25 15:31:18 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/011797.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/011797hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1ymga1 f.19.1.1 (A:6-239) Aqu 19.7 64 0.0046 27.6 5.5 35 392-426 69-103 (234)
2 d1j4na_ f.19.1.1 (A:) Aquapori 16.5 2.9E+02 0.021 23.2 13.8 24 156-179 91-114 (249)
3 d1fx8a_ f.19.1.1 (A:) Glycerol 14.2 1.4E+02 0.01 25.6 6.4 35 391-425 68-102 (254)
4 d1rc2a_ f.19.1.1 (A:) Aquapori 12.2 1.1E+02 0.0079 25.7 4.9 33 394-426 71-103 (231)
5 d1cola_ f.1.1.1 (A:) Colicin A 11.8 49 0.0036 28.0 2.2 23 408-430 174-196 (197)
6 d1j4na_ f.19.1.1 (A:) Aquapori 11.8 1.3E+02 0.0097 25.6 5.5 35 392-426 84-118 (249)
7 d1q90r_ f.23.12.1 (R:) ISP sub 7.8 1.5E+02 0.011 18.3 2.8 24 330-353 7-30 (39)
8 d1pw4a_ f.38.1.1 (A:) Glycerol 7.4 6E+02 0.044 21.4 19.5 19 108-127 46-64 (447)
9 d2yvxa3 f.57.1.1 (A:276-448) M 6.7 2.1E+02 0.015 23.2 4.2 45 344-395 121-166 (173)
10 d1ymga1 f.19.1.1 (A:6-239) Aqu 6.6 2.6E+02 0.019 23.4 5.0 24 156-179 76-99 (234)
No 1
>d1ymga1 f.19.1.1 (A:6-239) Aquaporin-0 {Cow (Bos taurus) [TaxId: 9913]}
Probab=19.65 E-value=64 Score=27.64 Aligned_cols=35 Identities=14% Similarity=0.275 Sum_probs=30.0
Q ss_pred HHHHhCCcchhHHHHHHHHHHHHHHHHHHHHHHcH
Q 011797 392 QYYLLDRFPVPYAAFFTLVATFAAFAGQHVVRKII 426 (477)
Q Consensus 392 ~~~~~G~i~~~~~l~l~~g~iiGa~iGa~l~~kl~ 426 (477)
.++..|+++|......++..++|+.+|+.++..+.
T Consensus 69 a~~~~g~i~~~~~~~Yi~aQ~lGa~~ga~l~~~~~ 103 (234)
T d1ymga1 69 AFLVGSQMSLLRAICYMVAQLLGAVAGAAVLYSVT 103 (234)
T ss_dssp HHHHTTSSCHHHHHHHHHHHHHHHHHHHHHHHHHS
T ss_pred HHHhccCCChhheeeeeehHHHHHHHHHHHHHHHc
Confidence 35568999999999999999999999998876553
No 2
>d1j4na_ f.19.1.1 (A:) Aquaporin-1 {Cow (Bos taurus) [TaxId: 9913]}
Probab=16.50 E-value=2.9e+02 Score=23.19 Aligned_cols=24 Identities=17% Similarity=0.174 Sum_probs=21.9
Q ss_pred ccHHHHHHHHHHHHHHHHHHHHHH
Q 011797 156 IDYDLALLFQPMLMLGISIGVAFN 179 (477)
Q Consensus 156 Id~~l~~~l~~~~l~Ga~lGa~l~ 179 (477)
++|+......+.-++|+.+|+.+.
T Consensus 91 i~~~~~~~Yi~aQ~lGa~~g~~~~ 114 (249)
T d1j4na_ 91 ISVLRAIMYIIAQCVGAIVATAIL 114 (249)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cchhheeeeeeHHHHHHHHHHhhh
Confidence 899999999999999999997655
No 3
>d1fx8a_ f.19.1.1 (A:) Glycerol uptake facilitator protein GlpF {Escherichia coli [TaxId: 562]}
Probab=14.19 E-value=1.4e+02 Score=25.57 Aligned_cols=35 Identities=17% Similarity=0.262 Sum_probs=29.4
Q ss_pred HHHHHhCCcchhHHHHHHHHHHHHHHHHHHHHHHc
Q 011797 391 VQYYLLDRFPVPYAAFFTLVATFAAFAGQHVVRKI 425 (477)
Q Consensus 391 ~~~~~~G~i~~~~~l~l~~g~iiGa~iGa~l~~kl 425 (477)
+..+..|+++|......++..++|+.+|+.+.+-+
T Consensus 68 la~~i~g~~~~~~~~~Yi~aQ~lGa~~ga~l~~~~ 102 (254)
T d1fx8a_ 68 IALWLFACFDKRKVIPFIVSQVAGAFCAAALVYGL 102 (254)
T ss_dssp HHHHHHSCCCGGGHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHcCCCcHHHhHHHHHHHHHHHHHHHHHHHHH
Confidence 34566899999999999999999999999887543
No 4
>d1rc2a_ f.19.1.1 (A:) Aquaporin Z {Escherichia coli [TaxId: 562]}
Probab=12.16 E-value=1.1e+02 Score=25.74 Aligned_cols=33 Identities=12% Similarity=0.225 Sum_probs=28.9
Q ss_pred HHhCCcchhHHHHHHHHHHHHHHHHHHHHHHcH
Q 011797 394 YLLDRFPVPYAAFFTLVATFAAFAGQHVVRKII 426 (477)
Q Consensus 394 ~~~G~i~~~~~l~l~~g~iiGa~iGa~l~~kl~ 426 (477)
+..|+++|.......+..++|+.+|+.+.+-+.
T Consensus 71 ~~~g~~~~~~~~~Yi~aQ~lGa~~g~~l~~~i~ 103 (231)
T d1rc2a_ 71 WAGGRFPAKEVVGYVIAQVVGGIVAAALLYLIA 103 (231)
T ss_dssp HHTTCSCTTTHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HhcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 457999999999999999999999998876654
No 5
>d1cola_ f.1.1.1 (A:) Colicin A {Escherichia coli [TaxId: 562]}
Probab=11.84 E-value=49 Score=28.02 Aligned_cols=23 Identities=13% Similarity=0.098 Sum_probs=15.4
Q ss_pred HHHHHHHHHHHHHHHHHcHHHHH
Q 011797 408 TLVATFAAFAGQHVVRKIIAVLG 430 (477)
Q Consensus 408 ~~g~iiGa~iGa~l~~kl~~~~~ 430 (477)
++.+++|+++...++.++++...
T Consensus 174 li~~~v~alIdd~~~~~iN~~li 196 (197)
T d1cola_ 174 LLAAVVGALIDDKFADALNNEII 196 (197)
T ss_dssp HHHHHHHHHHCTHHHHHHHHHTT
T ss_pred HHHHHHHHHhhHHHHHHHHHHHh
Confidence 45667777777777777766543
No 6
>d1j4na_ f.19.1.1 (A:) Aquaporin-1 {Cow (Bos taurus) [TaxId: 9913]}
Probab=11.83 E-value=1.3e+02 Score=25.60 Aligned_cols=35 Identities=14% Similarity=0.198 Sum_probs=29.5
Q ss_pred HHHHhCCcchhHHHHHHHHHHHHHHHHHHHHHHcH
Q 011797 392 QYYLLDRFPVPYAAFFTLVATFAAFAGQHVVRKII 426 (477)
Q Consensus 392 ~~~~~G~i~~~~~l~l~~g~iiGa~iGa~l~~kl~ 426 (477)
..+..|++++......++..++|+.+|+.+.+.+-
T Consensus 84 a~~~~g~i~~~~~~~Yi~aQ~lGa~~g~~~~~~~~ 118 (249)
T d1j4na_ 84 GLLLSCQISVLRAIMYIIAQCVGAIVATAILSGIT 118 (249)
T ss_dssp HHHHTTSSCHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHhccccchhheeeeeeHHHHHHHHHHhhheeec
Confidence 34567999999999999999999999988776654
No 7
>d1q90r_ f.23.12.1 (R:) ISP subunit from the cytochrome b6f complex, transmembrane anchor {Chlamydomonas reinhardtii [TaxId: 3055]}
Probab=7.83 E-value=1.5e+02 Score=18.26 Aligned_cols=24 Identities=13% Similarity=-0.024 Sum_probs=17.0
Q ss_pred hhhHHHHHHHHHHHHHHHHHhhhh
Q 011797 330 WKIHQIVFYCFCGIVAGMVGGLLG 353 (477)
Q Consensus 330 ~~~~~~~~~~~~G~~aG~isGllG 353 (477)
...|++.....+|.+++-..|+++
T Consensus 7 MgrR~~MNLll~G~~~~~~~g~l~ 30 (39)
T d1q90r_ 7 MNKRNIMNLILAGGAGLPITTLAL 30 (39)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHhccchhhhhhcc
Confidence 345666777778888887777765
No 8
>d1pw4a_ f.38.1.1 (A:) Glycerol-3-phosphate transporter {Escherichia coli [TaxId: 562]}
Probab=7.45 E-value=6e+02 Score=21.40 Aligned_cols=19 Identities=21% Similarity=0.282 Sum_probs=11.4
Q ss_pred chHHHHHHHhCCChhhHhHH
Q 011797 108 IFVPMLTLIIGFDPKSATAI 127 (477)
Q Consensus 108 i~vPiL~~~~g~~~~~Av~t 127 (477)
+..|.+.- .|++..+.--.
T Consensus 46 ~~~p~~~~-~g~s~~~~g~~ 64 (447)
T d1pw4a_ 46 LAMPYLVE-QGFSRGDLGFA 64 (447)
T ss_dssp HHHHHTTS-STTCSSCHHHH
T ss_pred HHHHHHHH-hCcCHHHHHHH
Confidence 45676655 57777665433
No 9
>d2yvxa3 f.57.1.1 (A:276-448) Mg2+ transporter MgtE {Thermus thermophilus [TaxId: 274]}
Probab=6.65 E-value=2.1e+02 Score=23.18 Aligned_cols=45 Identities=24% Similarity=0.494 Sum_probs=30.7
Q ss_pred HHHHHHhhhhcchhhhHHHHHH-hcCCChHHHHHHHHHHHHHHHHHHHHHHHH
Q 011797 344 VAGMVGGLLGLGGGFILGPLFL-ELGIPPQVASATSTFAMTFSSSMSVVQYYL 395 (477)
Q Consensus 344 ~aG~isGllGiGGG~i~~PlLl-~~gl~~~~A~ATs~~~~~~ss~~s~~~~~~ 395 (477)
..-.+++++| ...|+++ .+|.||..++ +-+....+.+.+...|+.
T Consensus 121 ~~~~ia~~~G-----~~lPlll~klg~DPA~aS--~P~itti~Di~g~~iyf~ 166 (173)
T d2yvxa3 121 LIVFFANLVG-----AMLPFLLRRLGVDPALVS--NPLVATLSDVTGLLIYLS 166 (173)
T ss_dssp HHHHHHHHHH-----HHHHHHHHHTSCCGGGSC--STTHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHH-----HHHHHHHHHhCCChhhhh--hhHHHHHHHHHHHHHHHH
Confidence 3344555555 4567775 8899997764 456677788888888765
No 10
>d1ymga1 f.19.1.1 (A:6-239) Aquaporin-0 {Cow (Bos taurus) [TaxId: 9913]}
Probab=6.58 E-value=2.6e+02 Score=23.36 Aligned_cols=24 Identities=21% Similarity=0.245 Sum_probs=22.1
Q ss_pred ccHHHHHHHHHHHHHHHHHHHHHH
Q 011797 156 IDYDLALLFQPMLMLGISIGVAFN 179 (477)
Q Consensus 156 Id~~l~~~l~~~~l~Ga~lGa~l~ 179 (477)
++|+......+.-++|+++|+.+.
T Consensus 76 i~~~~~~~Yi~aQ~lGa~~ga~l~ 99 (234)
T d1ymga1 76 MSLLRAICYMVAQLLGAVAGAAVL 99 (234)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CChhheeeeeehHHHHHHHHHHHH
Confidence 999999999999999999998655
Done!