Your job contains 1 sequence.
>011798
MDINEIIGETARPVDNIPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGA
NSRWLDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSIS
CGAHCTAAIAEPRENDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVV
ALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHS
AAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTS
KGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVY
MRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLADACSLKEL
CEFRLAESVTLSNASEIEDVASRTGSEALARLCERLREHSLHGDEFDCDDDTRNGND
The BLAST search returned 4 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 011798
(477 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2076532 - symbol:AT3G02300 "AT3G02300" species... 1998 1.4e-206 1
ZFIN|ZDB-GENE-090313-139 - symbol:herc3 "hect domain and ... 378 1.0e-33 1
UNIPROTKB|F1RW66 - symbol:HERC3 "Uncharacterized protein"... 376 1.7e-33 1
RGD|1307803 - symbol:Herc3 "HECT and RLD domain containin... 374 2.1e-33 1
UNIPROTKB|Q15034 - symbol:HERC3 "Probable E3 ubiquitin-pr... 371 5.9e-33 1
RGD|1310971 - symbol:Herc4 "HECT and RLD domain containin... 371 5.9e-33 1
UNIPROTKB|E2RMB0 - symbol:HERC3 "Uncharacterized protein"... 370 7.5e-33 1
UNIPROTKB|A2VDP7 - symbol:HERC3 "HERC3 protein" species:9... 367 1.6e-32 1
UNIPROTKB|F1NBC5 - symbol:HERC3 "Uncharacterized protein"... 366 2.0e-32 1
UNIPROTKB|E1C514 - symbol:HERC3 "Uncharacterized protein"... 365 2.6e-32 1
MGI|MGI:1914595 - symbol:Herc4 "hect domain and RLD 4" sp... 362 5.5e-32 1
UNIPROTKB|E1BAV2 - symbol:HERC4 "Uncharacterized protein"... 360 8.9e-32 1
FB|FBgn0035207 - symbol:CG9153 species:7227 "Drosophila m... 360 9.0e-32 1
ZFIN|ZDB-GENE-070718-6 - symbol:herc2 "hect domain and RL... 308 1.1e-31 3
UNIPROTKB|E2RFW5 - symbol:HERC4 "Uncharacterized protein"... 357 1.8e-31 1
UNIPROTKB|E2RFV1 - symbol:HERC4 "Uncharacterized protein"... 357 1.9e-31 1
UNIPROTKB|Q5GLZ8 - symbol:HERC4 "Probable E3 ubiquitin-pr... 356 2.4e-31 1
TAIR|locus:2163986 - symbol:UVR8 "UVB-RESISTANCE 8" speci... 339 8.8e-31 1
RGD|1308467 - symbol:Rcbtb1 "regulator of chromosome cond... 331 1.2e-30 2
MGI|MGI:1918580 - symbol:Rcbtb1 "regulator of chromosome ... 328 3.4e-30 2
ZFIN|ZDB-GENE-030131-7951 - symbol:rcbtb1 "regulator of c... 326 5.6e-30 2
POMBASE|SPBC557.03c - symbol:pim1 "Ran GDP/GTP exchange f... 344 5.6e-30 1
UNIPROTKB|E1BVG2 - symbol:RCBTB1 "Uncharacterized protein... 327 6.1e-30 2
UNIPROTKB|I3LCV3 - symbol:RCBTB1 "Uncharacterized protein... 324 1.8e-29 2
UNIPROTKB|Q8NDN9 - symbol:RCBTB1 "RCC1 and BTB domain-con... 322 2.1e-29 2
TAIR|locus:2076889 - symbol:AT3G02510 "AT3G02510" species... 326 2.2e-29 1
UNIPROTKB|E1BKF7 - symbol:RCBTB1 "Uncharacterized protein... 321 2.9e-29 2
UNIPROTKB|F1PV11 - symbol:RCBTB1 "Uncharacterized protein... 321 6.0e-29 2
RGD|1307989 - symbol:Herc2 "HECT and RLD domain containin... 312 8.5e-29 3
UNIPROTKB|F1M560 - symbol:Herc2 "Protein Herc2" species:1... 312 8.7e-29 3
TAIR|locus:2146142 - symbol:AT5G16040 "AT5G16040" species... 319 1.5e-28 1
UNIPROTKB|D4ACN3 - symbol:Herc2 "Protein Herc2" species:1... 312 2.1e-28 3
MGI|MGI:103234 - symbol:Herc2 "hect (homologous to the E6... 312 2.2e-28 3
UNIPROTKB|F1NCH3 - symbol:HERC4 "Uncharacterized protein"... 337 5.1e-28 1
FB|FBgn0031107 - symbol:HERC2 "HECT and RLD domain contai... 324 5.5e-28 3
UNIPROTKB|Q9UGK8 - symbol:SERGEF "Secretion-regulating gu... 322 1.4e-27 1
MGI|MGI:1917200 - symbol:Rcbtb2 "regulator of chromosome ... 320 1.4e-27 2
TAIR|locus:2025277 - symbol:PRAF1 "AT1G76950" species:370... 328 4.4e-27 2
UNIPROTKB|Q74AS9 - symbol:GSU2272 "ATS1 domain repeat lip... 306 5.1e-27 1
TIGR_CMR|GSU_2272 - symbol:GSU_2272 "lipoprotein, putativ... 306 5.1e-27 1
UNIPROTKB|Q3MHW0 - symbol:SERGEF "Secretion-regulating gu... 318 6.4e-27 1
TAIR|locus:2159295 - symbol:RUG3 "RCC1/UVR8/GEF-like 3" s... 315 8.3e-27 1
MGI|MGI:1351630 - symbol:Sergef "secretion regulating gua... 315 1.7e-26 1
UNIPROTKB|Q74DR4 - symbol:GSU1251 "ATS1 domain repeat pro... 324 6.2e-26 1
TIGR_CMR|GSU_1251 - symbol:GSU_1251 "BNR repeat domain pr... 324 6.2e-26 1
UNIPROTKB|O95199 - symbol:RCBTB2 "RCC1 and BTB domain-con... 305 1.5e-25 2
UNIPROTKB|F1N7C1 - symbol:HERC6 "Uncharacterized protein"... 314 3.5e-25 1
RGD|1306366 - symbol:Herc1 "HECT and RLD domain containin... 311 1.1e-24 1
ZFIN|ZDB-GENE-081015-2 - symbol:rpgrb "retinitis pigmento... 309 1.2e-24 2
TAIR|locus:2009739 - symbol:AT1G65920 species:3702 "Arabi... 309 1.4e-24 1
UNIPROTKB|Q15751 - symbol:HERC1 "Probable E3 ubiquitin-pr... 314 2.7e-24 1
UNIPROTKB|E1C4H7 - symbol:HERC1 "Uncharacterized protein"... 314 2.7e-24 1
TAIR|locus:504956339 - symbol:RUG1 "AT5G08710" species:37... 295 3.2e-24 1
UNIPROTKB|F1MNS0 - symbol:HERC1 "Uncharacterized protein"... 313 3.5e-24 1
UNIPROTKB|F1S098 - symbol:HERC1 "Uncharacterized protein"... 313 3.5e-24 1
UNIPROTKB|Q9N1T2 - symbol:RPGR "X-linked retinitis pigmen... 305 3.9e-24 1
UNIPROTKB|E2QYQ5 - symbol:HERC1 "Uncharacterized protein"... 311 6.0e-24 1
UNIPROTKB|F1NUG6 - symbol:Gga.50841 "Uncharacterized prot... 300 7.9e-24 1
TAIR|locus:2165770 - symbol:AT5G42140 "AT5G42140" species... 302 9.8e-24 1
UNIPROTKB|F1LPM8 - symbol:Herc6 "Protein Herc6" species:1... 300 1.6e-23 1
TAIR|locus:505006603 - symbol:AT5G12350 "AT5G12350" speci... 299 2.2e-23 1
MGI|MGI:1344037 - symbol:Rpgr "retinitis pigmentosa GTPas... 297 3.3e-23 1
UNIPROTKB|Q92834 - symbol:RPGR "X-linked retinitis pigmen... 299 4.1e-23 2
UNIPROTKB|E1BW48 - symbol:HERC2 "Uncharacterized protein"... 316 6.0e-23 3
UNIPROTKB|E1C8K2 - symbol:HERC2 "Uncharacterized protein"... 316 6.0e-23 3
ZFIN|ZDB-GENE-070912-423 - symbol:rpgra "retinitis pigmen... 296 9.2e-23 1
TAIR|locus:2099986 - symbol:AT3G55580 species:3702 "Arabi... 285 1.3e-22 1
ASPGD|ASPL0000064315 - symbol:rcc1 species:162425 "Emeric... 229 1.6e-22 2
UNIPROTKB|J9NWD8 - symbol:HERC1 "Uncharacterized protein"... 298 1.6e-22 1
RGD|1561739 - symbol:Herc6 "HECT and RLD domain containin... 291 1.7e-22 1
UNIPROTKB|O95714 - symbol:HERC2 "E3 ubiquitin-protein lig... 312 2.2e-22 3
UNIPROTKB|F1PBB3 - symbol:HERC6 "Uncharacterized protein"... 289 2.8e-22 1
UNIPROTKB|G3MX12 - symbol:HERC2 "Uncharacterized protein"... 309 5.2e-22 3
UNIPROTKB|E2RDC2 - symbol:HERC2 "Uncharacterized protein"... 309 5.5e-22 3
UNIPROTKB|E1B782 - symbol:HERC2 "Uncharacterized protein"... 309 5.5e-22 3
WB|WBGene00017195 - symbol:glo-4 species:6239 "Caenorhabd... 246 5.9e-22 2
ZFIN|ZDB-GENE-061220-11 - symbol:sergef "secretion regula... 274 1.1e-21 1
MGI|MGI:1914388 - symbol:Herc6 "hect domain and RLD 6" sp... 283 1.3e-21 1
UNIPROTKB|Q8IVU3 - symbol:HERC6 "Probable E3 ubiquitin-pr... 283 1.3e-21 1
TAIR|locus:2144291 - symbol:AT5G11580 "AT5G11580" species... 201 8.5e-21 2
ZFIN|ZDB-GENE-040426-2216 - symbol:rcc1 "regulator of chr... 264 1.7e-20 1
UNIPROTKB|Q9UII4 - symbol:HERC5 "E3 ISG15--protein ligase... 273 1.8e-20 1
WB|WBGene00021685 - symbol:herc-1 species:6239 "Caenorhab... 185 1.8e-20 2
UNIPROTKB|Q9BL11 - symbol:herc-1 "Protein HERC-1" species... 185 1.8e-20 2
RGD|1309901 - symbol:Rccd1 "RCC1 domain containing 1" spe... 200 3.7e-20 2
UNIPROTKB|F1N1N9 - symbol:HERC5 "Uncharacterized protein"... 269 4.6e-20 1
UNIPROTKB|F1PB99 - symbol:HERC5 "Uncharacterized protein"... 268 6.6e-20 1
TAIR|locus:2086253 - symbol:AT3G23270 "AT3G23270" species... 271 1.2e-19 2
RGD|1592835 - symbol:Rcc1 "regulator of chromosome conden... 255 2.1e-19 1
UNIPROTKB|P18754 - symbol:RCC1 "Regulator of chromosome c... 255 2.1e-19 1
DICTYBASE|DDB_G0282633 - symbol:DDB_G0282633 "putative gu... 260 4.4e-19 1
UNIPROTKB|Q7ZZC8 - symbol:nek9 "Serine/threonine-protein ... 260 4.6e-19 1
UNIPROTKB|E2R5W9 - symbol:RCCD1 "Uncharacterized protein"... 188 5.5e-19 3
TAIR|locus:2156233 - symbol:RUG2 "RCC1/UVR8/GEF-like 2" s... 229 6.5e-19 2
TAIR|locus:2092190 - symbol:AT3G26100 species:3702 "Arabi... 254 6.6e-19 1
MGI|MGI:2444156 - symbol:Rccd1 "RCC1 domain containing 1"... 191 1.2e-18 2
DICTYBASE|DDB_G0278255 - symbol:DDB_G0278255 "regulator o... 222 1.2e-18 2
UNIPROTKB|F1NXI5 - symbol:SERGEF "Uncharacterized protein... 246 1.3e-18 1
UNIPROTKB|Q9P258 - symbol:RCC2 "Protein RCC2" species:960... 251 1.4e-18 1
TAIR|locus:2035423 - symbol:AT1G19880 species:3702 "Arabi... 251 1.5e-18 1
WARNING: Descriptions of 127 database sequences were not reported due to the
limiting value of parameter V = 100.
>TAIR|locus:2076532 [details] [associations]
symbol:AT3G02300 "AT3G02300" species:3702 "Arabidopsis
thaliana" [GO:0008150 "biological_process" evidence=ND] [GO:0008536
"Ran GTPase binding" evidence=ISS] INTERPRO:IPR000408 Pfam:PF00415
EMBL:CP002686 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 IPI:IPI00534317
RefSeq:NP_186879.2 UniGene:At.41157 ProteinModelPortal:F4J609
SMR:F4J609 EnsemblPlants:AT3G02300.1 GeneID:821167
KEGG:ath:AT3G02300 OMA:LKELCEF Uniprot:F4J609
Length = 471
Score = 1998 (708.4 bits), Expect = 1.4e-206, P = 1.4e-206
Identities = 372/464 (80%), Positives = 408/464 (87%)
Query: 1 MDINEIIGETARPVDNIPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGA 60
MDI EIIGE A P +IP KSAIYVWGYN SGQTGR +E+ LRIPKQLPPELFGCPAGA
Sbjct: 1 MDIGEIIGEVA-PSVSIPTKSAIYVWGYNQSGQTGRNEQEKLLRIPKQLPPELFGCPAGA 59
Query: 61 NSRWLDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSIS 120
NSRWLDI+CG EHTAAVASDG+LF WGANE+GQLGDGTE GRKHP+KVKQLQSEFVK +S
Sbjct: 60 NSRWLDISCGREHTAAVASDGSLFAWGANEYGQLGDGTEVGRKHPKKVKQLQSEFVKFVS 119
Query: 121 CGAHCTAAIAEPRENDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVV 180
CGA CTAAIAEPRENDGT+STSRLWVWGQNQGSN PRLF GAF T I QVSCG+ HVV
Sbjct: 120 CGAFCTAAIAEPRENDGTLSTSRLWVWGQNQGSNLPRLFSGAFPATTAIRQVSCGTAHVV 179
Query: 181 ALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHS 240
ALSE GLLQAWGYNE GQLGRG+TCEGLQ PRVI YAKFLDEAPEL KI Q+SCGEYH+
Sbjct: 180 ALSEEGLLQAWGYNEQGQLGRGVTCEGLQAPRVINAYAKFLDEAPELVKIMQLSCGEYHT 239
Query: 241 AAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTS 300
AA+S+ GEVYTWGLGS+GQLGH SLQSGDKEL+PRRVV LDG+ +K+VACGGVH+CAL+
Sbjct: 240 AALSDAGEVYTWGLGSMGQLGHVSLQSGDKELIPRRVVGLDGVSMKEVACGGVHTCALSL 299
Query: 301 KGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVY 360
+GALYAWGG QAGQLGLGPQ+ F + N S+ RN+P+LV+P V+LVACGHSHTLVY
Sbjct: 300 EGALYAWGGGQAGQLGLGPQSGFFFSVSNGSEMLLRNVPVLVIPTDVRLVACGHSHTLVY 359
Query: 361 MRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLADACSLKEL 420
MR+GRI GWGYNSYGQAANEKS+YAWYPSPVDWCVG+VRKLAAGGGHSAVL DA SLKEL
Sbjct: 360 MREGRICGWGYNSYGQAANEKSSYAWYPSPVDWCVGQVRKLAAGGGHSAVLTDAFSLKEL 419
Query: 421 CEFRLAESVTLSNASEIEDVASRTGSEALARLCERLREHSLHGD 464
CEF+LA+SV LSNASEI+DVA R GSEALARLCERLRE L GD
Sbjct: 420 CEFQLADSVNLSNASEIQDVAFRMGSEALARLCERLREQLLDGD 463
>ZFIN|ZDB-GENE-090313-139 [details] [associations]
symbol:herc3 "hect domain and RLD 3" species:7955
"Danio rerio" [GO:0006464 "cellular protein modification process"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
Pfam:PF00632 InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119
INTERPRO:IPR000408 Pfam:PF00415 ZFIN:ZDB-GENE-090313-139
GO:GO:0016567 GO:GO:0005622 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 SUPFAM:SSF56204 eggNOG:COG5021
GeneTree:ENSGT00660000095216 CTD:8916 HOGENOM:HOG000208452
HOVERGEN:HBG050878 OMA:SPAVDFR OrthoDB:EOG4RBQHS EMBL:CU467858
IPI:IPI00901161 RefSeq:NP_001139096.1 UniGene:Dr.86009
Ensembl:ENSDART00000112994 Ensembl:ENSDART00000141977
GeneID:100003587 NextBio:20785898 Uniprot:B8JLD4
Length = 1046
Score = 378 (138.1 bits), Expect = 1.0e-33, P = 1.0e-33
Identities = 105/292 (35%), Positives = 153/292 (52%)
Query: 51 PELFGCPAGANSRWLDIACGHEHTAAVASDGTLFTWGANEFGQLGDGT-EEGRKHPEKVK 109
PEL G A + ++CG H+ AV G +F WGA + GQLG GT EE + P +K
Sbjct: 75 PELVG--ALDAQKISGVSCGQAHSLAVNEQGQVFAWGAGDGGQLGLGTAEEAVRVPRLIK 132
Query: 110 QLQSEFVKSISCGAHCTAAIAEPRENDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTI- 168
+L + + CG H A+++ DG +L+VWG+N +L G P+T+
Sbjct: 133 KLCEHRISQVMCGNHHCIALSK----DG-----QLFVWGENSSG---QLGLGKGEPSTLS 180
Query: 169 ------IC-----QVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGY 217
+C Q+S G H ALS G + WG N GQLG + R + +
Sbjct: 181 PQPLKSLCGIPLTQISAGGDHSFALSFSGAVFGWGKNSAGQLGLND-----EQDRAVPCH 235
Query: 218 AKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRV 277
KFL +K+ +SCGE H+AA+++ G ++T+G GS GQLGH S ++ E LPRRV
Sbjct: 236 IKFLRS----QKVVYISCGEEHTAALTKEGGLFTFGNGSKGQLGHDSTRN---EPLPRRV 288
Query: 278 VALDGIFIKDVACGGVHSCALT-SKGALYAWGGSQAGQLGLGPQTRSFSLIP 328
+ L G + +ACG H+ A S G +YA+G + GQLG G + + S +P
Sbjct: 289 MELMGTEVSQIACGRNHTLAFVPSTGLIYAFGCNTQGQLGTGIRGSAKSPVP 340
Score = 321 (118.1 bits), Expect = 5.3e-26, P = 5.3e-26
Identities = 94/294 (31%), Positives = 140/294 (47%)
Query: 26 WGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWL-DIACGHEHTAAVASDGTLF 84
WG + +GQ G E + P+ C + R L ++ACG++H+ + DG+++
Sbjct: 5 WGSSGAGQLGIGASEASVFEPRSC------CVF--DGRGLKEVACGNQHSLFLLHDGSVY 56
Query: 85 TWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND--GTISTS 142
T G+N GQLG ++G PE V L ++ + +SCG + A+ E + G
Sbjct: 57 TCGSNSCGQLGH--DKGGSRPELVGALDAQKISGVSCGQAHSLAVNEQGQVFAWGAGDGG 114
Query: 143 RLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRG 202
+L + + PRL I QV CG+ H +ALS+ G L WG N GQLG G
Sbjct: 115 QLGLGTAEEAVRVPRLIKKLCEHR--ISQVMCGNHHCIALSKDGQLFVWGENSSGQLGLG 172
Query: 203 ITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGH 262
P+ +K L P +TQ+S G HS A+S +G V+ WG S GQLG
Sbjct: 173 KGEPSTLSPQPLKS----LCGIP----LTQISAGGDHSFALSFSGAVFGWGKNSAGQLG- 223
Query: 263 CSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLG 316
L +P + L + ++CG H+ ALT +G L+ +G GQLG
Sbjct: 224 --LNDEQDRAVPCHIKFLRSQKVVYISCGEEHTAALTKEGGLFTFGNGSKGQLG 275
Score = 319 (117.4 bits), Expect = 9.4e-26, P = 9.4e-26
Identities = 83/243 (34%), Positives = 128/243 (52%)
Query: 83 LFTWGANEFGQLGDGTEEGRK-HPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIST 141
+ WG++ GQLG G E P +K ++CG + + +DG++ T
Sbjct: 2 MLCWGSSGAGQLGIGASEASVFEPRSCCVFDGRGLKEVACGNQHSLFLL----HDGSVYT 57
Query: 142 ---SRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQ 198
+ G ++G + P L GA I VSCG H +A++E G + AWG + GQ
Sbjct: 58 CGSNSCGQLGHDKGGSRPELV-GALDAQKI-SGVSCGQAHSLAVNEQGQVFAWGAGDGGQ 115
Query: 199 LGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVG 258
LG G E ++ PR+IK K + +I+QV CG +H A+S++G+++ WG S G
Sbjct: 116 LGLGTAEEAVRVPRLIK---KLCEH-----RISQVMCGNHHCIALSKDGQLFVWGENSSG 167
Query: 259 QLGHCSLQSGDKELL-PRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGL 317
QLG L G+ L P+ + +L GI + ++ GG HS AL+ GA++ WG + AGQLGL
Sbjct: 168 QLG---LGKGEPSTLSPQPLKSLCGIPLTQISAGGDHSFALSFSGAVFGWGKNSAGQLGL 224
Query: 318 GPQ 320
+
Sbjct: 225 NDE 227
Score = 266 (98.7 bits), Expect = 1.1e-19, P = 1.1e-19
Identities = 83/244 (34%), Positives = 121/244 (49%)
Query: 171 QVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKI 230
+V+CG+ H + L G + G N GQLG +G P ++ G A + +KI
Sbjct: 38 EVACGNQHSLFLLHDGSVYTCGSNSCGQLGHD---KGGSRPELV-G-------ALDAQKI 86
Query: 231 TQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVAC 290
+ VSCG+ HS AV+E G+V+ WG G GQLG + + + +PR + L I V C
Sbjct: 87 SGVSCGQAHSLAVNEQGQVFAWGAGDGGQLGLGTAEEAVR--VPRLIKKLCEHRISQVMC 144
Query: 291 GGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLV 350
G H AL+ G L+ WG + +GQLGLG S +L P + IP+ Q+
Sbjct: 145 GNHHCIALSKDGQLFVWGENSSGQLGLGKGEPS-TLSPQPLKSLC-GIPL------TQIS 196
Query: 351 ACG-HSHTLVYMRDGRIHGWGYNSYGQAA-NEKSTYAWYPSPVDWCVGE-VRKLAAGGGH 407
A G HS L + G + GWG NS GQ N++ A P + + + V ++ G H
Sbjct: 197 AGGDHSFALSF--SGAVFGWGKNSAGQLGLNDEQDRA-VPCHIKFLRSQKVVYISCGEEH 253
Query: 408 SAVL 411
+A L
Sbjct: 254 TAAL 257
Score = 261 (96.9 bits), Expect = 4.1e-19, P = 4.1e-19
Identities = 77/230 (33%), Positives = 111/230 (48%)
Query: 187 LLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSEN 246
++ WG + GQLG G + + PR F + + +V+CG HS + +
Sbjct: 1 MMLCWGSSGAGQLGIGASEASVFEPR---SCCVF-----DGRGLKEVACGNQHSLFLLHD 52
Query: 247 GEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYA 306
G VYT G S GQLGH + G + P V ALD I V+CG HS A+ +G ++A
Sbjct: 53 GSVYTCGSNSCGQLGHD--KGGSR---PELVGALDAQKISGVSCGQAHSLAVNEQGQVFA 107
Query: 307 WGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRI 366
WG GQLGLG + +P R I L + + V CG+ H + +DG++
Sbjct: 108 WGAGDGGQLGLGTAEEAVR-VP-------RLIKKLC-EHRISQVMCGNHHCIALSKDGQL 158
Query: 367 HGWGYNSYGQAA---NEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLA 412
WG NS GQ E ST + P P+ G + +++AGG HS L+
Sbjct: 159 FVWGENSSGQLGLGKGEPSTLS--PQPLKSLCGIPLTQISAGGDHSFALS 206
Score = 244 (91.0 bits), Expect = 3.2e-17, P = 3.2e-17
Identities = 72/240 (30%), Positives = 118/240 (49%)
Query: 185 CGLLQAWGYNEYGQL---GRGITCE-GLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHS 240
CG + NE GQ+ G G + GL + + + E +I+QV CG +H
Sbjct: 91 CGQAHSLAVNEQGQVFAWGAGDGGQLGLGTAEEAVRVPRLIKKLCE-HRISQVMCGNHHC 149
Query: 241 AAVSENGEVYTWGLGSVGQLGHCSLQSGDKELL-PRRVVALDGIFIKDVACGGVHSCALT 299
A+S++G+++ WG S GQLG L G+ L P+ + +L GI + ++ GG HS AL+
Sbjct: 150 IALSKDGQLFVWGENSSGQLG---LGKGEPSTLSPQPLKSLCGIPLTQISAGGDHSFALS 206
Query: 300 SKGALYAWGGSQAGQLGLGP-QTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTL 358
GA++ WG + AGQLGL Q R+ +P + R+ ++ + +CG HT
Sbjct: 207 FSGAVFGWGKNSAGQLGLNDEQDRA---VPCHIK-FLRSQKVVYI-------SCGEEHTA 255
Query: 359 VYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLADACSL 417
++G + +G S GQ ++ + P V +G EV ++A G H+ + L
Sbjct: 256 ALTKEGGLFTFGNGSKGQLGHDSTRNEPLPRRVMELMGTEVSQIACGRNHTLAFVPSTGL 315
Score = 212 (79.7 bits), Expect = 1.3e-12, Sum P(2) = 1.3e-12
Identities = 66/185 (35%), Positives = 90/185 (48%)
Query: 23 IYVWGYNHSGQTGR-KGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDG 81
++VWG N SGQ G KG L P+ L L G P I+ G +H+ A++ G
Sbjct: 158 LFVWGENSSGQLGLGKGEPSTLS-PQPLK-SLCGIPL------TQISAGGDHSFALSFSG 209
Query: 82 TLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRE--NDGTI 139
+F WG N GQLG E+ R P +K L+S+ V ISCG TAA+ + G
Sbjct: 210 AVFGWGKNSAGQLGLNDEQDRAVPCHIKFLRSQKVVYISCGEEHTAALTKEGGLFTFGNG 269
Query: 140 STSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVA-LSECGLLQAWGYNEYGQ 198
S +L G + N P T + Q++CG H +A + GL+ A+G N GQ
Sbjct: 270 SKGQL---GHDSTRNEPLPRRVMELMGTEVSQIACGRNHTLAFVPSTGLIYAFGCNTQGQ 326
Query: 199 LGRGI 203
LG GI
Sbjct: 327 LGTGI 331
Score = 199 (75.1 bits), Expect = 2.9e-12, P = 2.9e-12
Identities = 63/196 (32%), Positives = 93/196 (47%)
Query: 230 ITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVA 289
+TQ+S G HS A+S +G V+ WG S GQLG L +P + L + ++
Sbjct: 192 LTQISAGGDHSFALSFSGAVFGWGKNSAGQLG---LNDEQDRAVPCHIKFLRSQKVVYIS 248
Query: 290 CGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQL 349
CG H+ ALT +G L+ +G GQLG TR+ L P R + L+ V
Sbjct: 249 CGEEHTAALTKEGGLFTFGNGSKGQLG-HDSTRNEPL-P-------RRVMELMGTE-VSQ 298
Query: 350 VACGHSHTLVYMRD-GRIHGWGYNSYGQAANEKSTYAWYPSPVD----WCVGE------- 397
+ACG +HTL ++ G I+ +G N+ GQ A P PV C+G
Sbjct: 299 IACGRNHTLAFVPSTGLIYAFGCNTQGQLGTGIRGSAKSPVPVSNIQPLCIGNAYTRTEH 358
Query: 398 --VRKLAAGGGHSAVL 411
+ K+ +GG H+ +L
Sbjct: 359 CTIAKIHSGGDHNFLL 374
Score = 142 (55.0 bits), Expect = 5.6e-05, Sum P(2) = 5.6e-05
Identities = 36/107 (33%), Positives = 54/107 (50%)
Query: 22 AIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDG 81
A++ WG N +GQ G E+ +P + F + + + I+CG EHTAA+ +G
Sbjct: 210 AVFGWGKNSAGQLGLND-EQDRAVPCHIK---FL----RSQKVVYISCGEEHTAALTKEG 261
Query: 82 TLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAA 128
LFT+G GQLG + P +V +L V I+CG + T A
Sbjct: 262 GLFTFGNGSKGQLGHDSTRNEPLPRRVMELMGTEVSQIACGRNHTLA 308
Score = 37 (18.1 bits), Expect = 1.3e-12, Sum P(2) = 1.3e-12
Identities = 12/37 (32%), Positives = 19/37 (51%)
Query: 204 TCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHS 240
T L P V+ Y K L+ +P L+ + ++S E S
Sbjct: 800 TVVDLHFPLVL--YKKLLEISPTLDDLKELSPTEGRS 834
>UNIPROTKB|F1RW66 [details] [associations]
symbol:HERC3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] Pfam:PF00632
InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119 INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005737 GO:GO:0016567 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 SUPFAM:SSF56204
GeneTree:ENSGT00660000095216 CTD:8916 KO:K10614 OMA:SPAVDFR
EMBL:FP015981 EMBL:CU915521 RefSeq:XP_003129374.3 UniGene:Ssc.42366
Ensembl:ENSSSCT00000010082 GeneID:100517903 KEGG:ssc:100517903
Uniprot:F1RW66
Length = 1050
Score = 376 (137.4 bits), Expect = 1.7e-33, P = 1.7e-33
Identities = 109/308 (35%), Positives = 153/308 (49%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+Y G N GQ G ER+ P+Q+ G A A+ + +ACG H+ A++ G
Sbjct: 55 VYTCGLNTKGQLGH---EREGNKPEQI-----G--ALADEHIVHVACGESHSLALSDRGQ 104
Query: 83 LFTWGANEFGQLG-DGTEEGRKHPEKVKQLQSEFVKSISCGA-HCTAAIAEPRENDGTIS 140
LF+WGA GQLG TEE P +++L + + +SCG HC A A DG
Sbjct: 105 LFSWGAGSDGQLGLMTTEESVAVPRLIQKLNQQTILQVSCGNWHCLALAA-----DGQFF 159
Query: 141 TSRLWVWGQNQ-GS-NFPRLFWGAFTPNTI-------ICQVSCGSVHVVALSECGLLQAW 191
T WG+N G + F +P + + QV+ G H ALS G + W
Sbjct: 160 T-----WGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGW 214
Query: 192 GYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYT 251
G N GQLG E + P + K L +K+ +SCGE H+A ++++G V+T
Sbjct: 215 GMNNAGQLGLSDE-EDRESPC----HVKLL----RAQKVVYISCGEEHTAVLTKSGGVFT 265
Query: 252 WGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALT-SKGALYAWGGS 310
+G GS GQLGH S+ E+ PRRV+ L G + +ACG H+ A S G +YA+G
Sbjct: 266 FGAGSCGQLGHDSMND---EVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCG 322
Query: 311 QAGQLGLG 318
GQLG G
Sbjct: 323 ARGQLGTG 330
Score = 356 (130.4 bits), Expect = 2.4e-31, P = 2.4e-31
Identities = 109/341 (31%), Positives = 162/341 (47%)
Query: 83 LFTWGANEFGQLGDGTE-EGR-KHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIS 140
+ WG GQ G T +G P+ + VK ++CG + + E DG +
Sbjct: 1 MLCWGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGDHSVFLLE----DGEVY 56
Query: 141 TSRLWVWGQ---NQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYG 197
T L GQ + N P GA I+ V+CG H +ALS+ G L +WG G
Sbjct: 57 TCGLNTKGQLGHEREGNKPEQI-GALADEHIV-HVACGESHSLALSDRGQLFSWGAGSDG 114
Query: 198 QLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSV 257
QLG T E + PR+I+ L++ + I QVSCG +H A++ +G+ +TWG S
Sbjct: 115 QLGLMTTEESVAVPRLIQK----LNQ----QTILQVSCGNWHCLALAADGQFFTWGKNSH 166
Query: 258 GQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGL 317
GQLG + + P+RV +L+GI + VA GG HS AL+ GA++ WG + AGQLGL
Sbjct: 167 GQLGLG--KEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGL 224
Query: 318 GPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQA 377
+ ES + + L+ V ++CG HT V + G + +G S GQ
Sbjct: 225 SDEE------DRESPCHVK----LLRAQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQL 274
Query: 378 ANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLADACSL 417
++ P V +G EV ++A G H+ + L
Sbjct: 275 GHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGL 315
Score = 318 (117.0 bits), Expect = 1.2e-25, P = 1.2e-25
Identities = 90/293 (30%), Positives = 143/293 (48%)
Query: 26 WGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGTLFT 85
WGY GQ G + + P++ G + + + ++ACG +H+ + DG ++T
Sbjct: 4 WGYWSLGQPGISTNLQGI----VAEPQVCGFISDRSVK--EVACGGDHSVFLLEDGEVYT 57
Query: 86 WGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRE--NDGTISTSR 143
G N GQLG EG K PE++ L E + ++CG + A+++ + + G S +
Sbjct: 58 CGLNTKGQLGH-EREGNK-PEQIGALADEHIVHVACGESHSLALSDRGQLFSWGAGSDGQ 115
Query: 144 LWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGI 203
L + + PRL TI+ QVSCG+ H +AL+ G WG N +GQLG G
Sbjct: 116 LGLMTTEESVAVPRLIQ-KLNQQTIL-QVSCGNWHCLALAADGQFFTWGKNSHGQLGLGK 173
Query: 204 TCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHC 263
P+ ++ L+ P + QV+ G HS A+S +G V+ WG+ + GQLG
Sbjct: 174 EFPSQASPQRVRS----LEGIP----LAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLS 225
Query: 264 SLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLG 316
+ D+E P V L + ++CG H+ LT G ++ +G GQLG
Sbjct: 226 DEE--DRES-PCHVKLLRAQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLG 275
Score = 221 (82.9 bits), Expect = 1.3e-13, Sum P(2) = 1.3e-13
Identities = 67/204 (32%), Positives = 94/204 (46%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
+ A + WG N GQ G G+E + Q L G P +A G H+ A
Sbjct: 152 LAADGQFFTWGKNSHGQLGL-GKEFPSQASPQRVRSLEGIPLA------QVAAGGAHSFA 204
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRE-- 134
++ G +F WG N GQLG EE R+ P VK L+++ V ISCG TA + +
Sbjct: 205 LSLSGAVFGWGMNNAGQLGLSDEEDRESPCHVKLLRAQKVVYISCGEEHTAVLTKSGGVF 264
Query: 135 NDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVA-LSECGLLQAWGY 193
G S +L N N PR + + Q++CG H +A + GL+ A+G
Sbjct: 265 TFGAGSCGQLGHDSMNDEVN-PRRVLELM--GSEVTQIACGRQHTLAFVPSSGLIYAFGC 321
Query: 194 NEYGQLGRGITCEGLQGPRVIKGY 217
GQLG G TC ++ P +KGY
Sbjct: 322 GARGQLGTGHTCN-VKCPSPVKGY 344
Score = 215 (80.7 bits), Expect = 5.1e-14, P = 5.1e-14
Identities = 67/247 (27%), Positives = 115/247 (46%)
Query: 20 KSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRW-LDIACGHEHTAAVA 78
+ ++ WG GQ G E + +P+ L +L N + L ++CG+ H A+A
Sbjct: 102 RGQLFSWGAGSDGQLGLMTTEESVAVPR-LIQKL-------NQQTILQVSCGNWHCLALA 153
Query: 79 SDGTLFTWGANEFGQLGDGTE-EGRKHPEKVKQLQSEFVKSISCG-AHCTA-AIAEPREN 135
+DG FTWG N GQLG G E + P++V+ L+ + ++ G AH A +++
Sbjct: 154 ADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFG 213
Query: 136 DGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNE 195
G + +L + + P ++ +SCG H L++ G + +G
Sbjct: 214 WGMNNAGQLGL-SDEEDRESP-CHVKLLRAQKVV-YISCGEEHTAVLTKSGGVFTFGAGS 270
Query: 196 YGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAA-VSENGEVYTWGL 254
GQLG + + RV++ ++TQ++CG H+ A V +G +Y +G
Sbjct: 271 CGQLGHDSMNDEVNPRRVLELMGS---------EVTQIACGRQHTLAFVPSSGLIYAFGC 321
Query: 255 GSVGQLG 261
G+ GQLG
Sbjct: 322 GARGQLG 328
Score = 174 (66.3 bits), Expect = 1.6e-09, P = 1.6e-09
Identities = 49/163 (30%), Positives = 80/163 (49%)
Query: 230 ITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVA 289
+ QV+ G HS A+S +G V+ WG+ + GQLG + D+E P V L + ++
Sbjct: 192 LAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEE--DRES-PCHVKLLRAQKVVYIS 248
Query: 290 CGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQL 349
CG H+ LT G ++ +G GQLG + + + P R + + ++ + V
Sbjct: 249 CGEEHTAVLTKSGGVFTFGAGSCGQLG--HDSMNDEVNP-------RRV-LELMGSEVTQ 298
Query: 350 VACGHSHTLVYM-RDGRIHGWGYNSYGQAANEKSTYAWYPSPV 391
+ACG HTL ++ G I+ +G + GQ + PSPV
Sbjct: 299 IACGRQHTLAFVPSSGLIYAFGCGARGQLGTGHTCNVKCPSPV 341
Score = 37 (18.1 bits), Expect = 1.3e-13, Sum P(2) = 1.3e-13
Identities = 9/24 (37%), Positives = 13/24 (54%)
Query: 217 YAKFLDEAPELEKITQVSCGEYHS 240
Y K L+ P LE + ++S E S
Sbjct: 814 YKKLLNVQPGLEDLKELSPAEGRS 837
>RGD|1307803 [details] [associations]
symbol:Herc3 "HECT and RLD domain containing E3 ubiquitin
protein ligase 3" species:10116 "Rattus norvegicus" [GO:0004842
"ubiquitin-protein ligase activity" evidence=IBA] [GO:0005634
"nucleus" evidence=IBA] [GO:0005737 "cytoplasm" evidence=ISO;IBA]
[GO:0042787 "protein ubiquitination involved in ubiquitin-dependent
protein catabolic process" evidence=IBA] Pfam:PF00632
InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119 RGD:1307803
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005634 GO:GO:0005737
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 GO:GO:0042787
SUPFAM:SSF56204 EMBL:CH474011 IPI:IPI00568958 UniGene:Rn.203362
Ensembl:ENSRNOT00000009694 UCSC:RGD:1307803 Uniprot:D3ZYI2
Length = 909
Score = 374 (136.7 bits), Expect = 2.1e-33, P = 2.1e-33
Identities = 109/308 (35%), Positives = 155/308 (50%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+Y G N GQ G ER+ P+Q+ G A A+ + +ACG H+ A++ G
Sbjct: 55 VYTCGVNTKGQLGH---EREGNKPEQI-----G--ALADQHIIHVACGESHSLALSDRGQ 104
Query: 83 LFTWGANEFGQLG-DGTEEGRKHPEKVKQLQSEFVKSISCGA-HCTAAIAEPRENDGTIS 140
LF+WGA GQLG TE+ P +++L + + +SCG HC A A DG
Sbjct: 105 LFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAA-----DGQFF 159
Query: 141 TSRLWVWGQNQ-GS-NFPRLFWGAFTPNTI-------ICQVSCGSVHVVALSECGLLQAW 191
T WG+N G + F +P + + QV+ G H ALS G + W
Sbjct: 160 T-----WGKNSHGQLGLGKEFPSQTSPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGW 214
Query: 192 GYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYT 251
G N GQLG ++ E R + K L +K+ +SCGE H+A ++++G V+T
Sbjct: 215 GMNNAGQLG--LSDEK---DRESPCHVKLL----RTQKVVYISCGEEHTAVLTKSGGVFT 265
Query: 252 WGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALT-SKGALYAWGGS 310
+G GS GQLGH S+ E+ PRRV+ L G + +ACG H+ AL S G +YA+G
Sbjct: 266 FGAGSCGQLGHDSVND---EVNPRRVLELMGSEVTQIACGRQHTLALVPSSGLIYAFGCG 322
Query: 311 QAGQLGLG 318
GQLG G
Sbjct: 323 AKGQLGTG 330
Score = 354 (129.7 bits), Expect = 2.9e-31, P = 2.9e-31
Identities = 107/341 (31%), Positives = 165/341 (48%)
Query: 83 LFTWGANEFGQLGDGTE-EGR-KHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIS 140
+ WG GQ G + +G P+ + + +K ++CG + + + E DG +
Sbjct: 1 MLCWGYWSLGQPGISSNLQGIVAEPQVCRFVSDRSIKEVACGGNHSVFLLE----DGEVY 56
Query: 141 TSRLWVWGQ---NQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYG 197
T + GQ + N P GA II V+CG H +ALS+ G L +WG G
Sbjct: 57 TCGVNTKGQLGHEREGNKPEQI-GALADQHII-HVACGESHSLALSDRGQLFSWGAGSDG 114
Query: 198 QLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSV 257
QLG T + + PR+I+ L++ + I QVSCG +H A++ +G+ +TWG S
Sbjct: 115 QLGLMTTEDSVAVPRLIQK----LNQ----QTILQVSCGNWHCLALAADGQFFTWGKNSH 166
Query: 258 GQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGL 317
GQLG + + P+RV +L+GI + VA GG HS AL+ GA++ WG + AGQLGL
Sbjct: 167 GQLGLG--KEFPSQTSPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGL 224
Query: 318 GPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQA 377
+ ES + + L+ V ++CG HT V + G + +G S GQ
Sbjct: 225 SDEK------DRESPCHVK----LLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQL 274
Query: 378 ANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLADACSL 417
++ P V +G EV ++A G H+ L + L
Sbjct: 275 GHDSVNDEVNPRRVLELMGSEVTQIACGRQHTLALVPSSGL 315
Score = 309 (113.8 bits), Expect = 1.1e-24, P = 1.1e-24
Identities = 89/293 (30%), Positives = 139/293 (47%)
Query: 26 WGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGTLFT 85
WGY GQ G + + Q+ C ++ ++ACG H+ + DG ++T
Sbjct: 4 WGYWSLGQPGISSNLQGIVAEPQV------CRFVSDRSIKEVACGGNHSVFLLEDGEVYT 57
Query: 86 WGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRE--NDGTISTSR 143
G N GQLG EG K PE++ L + + ++CG + A+++ + + G S +
Sbjct: 58 CGVNTKGQLGH-EREGNK-PEQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQ 115
Query: 144 LWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGI 203
L + PRL TI+ QVSCG+ H +AL+ G WG N +GQLG G
Sbjct: 116 LGLMTTEDSVAVPRLIQ-KLNQQTIL-QVSCGNWHCLALAADGQFFTWGKNSHGQLGLGK 173
Query: 204 TCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHC 263
P+ ++ L+ P + QV+ G HS A+S +G V+ WG+ + GQLG
Sbjct: 174 EFPSQTSPQRVRS----LEGIP----LAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLS 225
Query: 264 SLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLG 316
+ D+E P V L + ++CG H+ LT G ++ +G GQLG
Sbjct: 226 DEK--DRES-PCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLG 275
Score = 215 (80.7 bits), Expect = 4.2e-14, P = 4.2e-14
Identities = 68/247 (27%), Positives = 116/247 (46%)
Query: 20 KSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRW-LDIACGHEHTAAVA 78
+ ++ WG GQ G E + +P+ L +L N + L ++CG+ H A+A
Sbjct: 102 RGQLFSWGAGSDGQLGLMTTEDSVAVPR-LIQKL-------NQQTILQVSCGNWHCLALA 153
Query: 79 SDGTLFTWGANEFGQLGDGTE-EGRKHPEKVKQLQSEFVKSISCG-AHCTA-AIAEPREN 135
+DG FTWG N GQLG G E + P++V+ L+ + ++ G AH A +++
Sbjct: 154 ADGQFFTWGKNSHGQLGLGKEFPSQTSPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFG 213
Query: 136 DGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNE 195
G + +L + + + P T + +SCG H L++ G + +G
Sbjct: 214 WGMNNAGQLGLSDEKDRES-PCHVKLLRTQKVVY--ISCGEEHTAVLTKSGGVFTFGAGS 270
Query: 196 YGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAA-VSENGEVYTWGL 254
GQLG + + RV++ ++TQ++CG H+ A V +G +Y +G
Sbjct: 271 CGQLGHDSVNDEVNPRRVLELMGS---------EVTQIACGRQHTLALVPSSGLIYAFGC 321
Query: 255 GSVGQLG 261
G+ GQLG
Sbjct: 322 GAKGQLG 328
Score = 213 (80.0 bits), Expect = 6.6e-13, Sum P(2) = 6.6e-13
Identities = 66/204 (32%), Positives = 94/204 (46%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
+ A + WG N GQ G G+E + Q L G P +A G H+ A
Sbjct: 152 LAADGQFFTWGKNSHGQLGL-GKEFPSQTSPQRVRSLEGIPLA------QVAAGGAHSFA 204
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRE-- 134
++ G +F WG N GQLG E+ R+ P VK L+++ V ISCG TA + +
Sbjct: 205 LSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVF 264
Query: 135 NDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVAL-SECGLLQAWGY 193
G S +L N N PR + + Q++CG H +AL GL+ A+G
Sbjct: 265 TFGAGSCGQLGHDSVNDEVN-PRRVLELM--GSEVTQIACGRQHTLALVPSSGLIYAFGC 321
Query: 194 NEYGQLGRGITCEGLQGPRVIKGY 217
GQLG G TC ++ P +KG+
Sbjct: 322 GAKGQLGTGHTCN-VKCPSPVKGH 344
Score = 168 (64.2 bits), Expect = 5.9e-09, P = 5.9e-09
Identities = 49/163 (30%), Positives = 79/163 (48%)
Query: 230 ITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVA 289
+ QV+ G HS A+S +G V+ WG+ + GQLG + D+E P V L + ++
Sbjct: 192 LAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEK--DRES-PCHVKLLRTQKVVYIS 248
Query: 290 CGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQL 349
CG H+ LT G ++ +G GQLG + +E + R + + ++ + V
Sbjct: 249 CGEEHTAVLTKSGGVFTFGAGSCGQLG-------HDSVNDEVNP--RRV-LELMGSEVTQ 298
Query: 350 VACGHSHTLVYM-RDGRIHGWGYNSYGQAANEKSTYAWYPSPV 391
+ACG HTL + G I+ +G + GQ + PSPV
Sbjct: 299 IACGRQHTLALVPSSGLIYAFGCGAKGQLGTGHTCNVKCPSPV 341
Score = 37 (18.1 bits), Expect = 6.6e-13, Sum P(2) = 6.6e-13
Identities = 9/24 (37%), Positives = 13/24 (54%)
Query: 217 YAKFLDEAPELEKITQVSCGEYHS 240
Y K L+ P LE + ++S E S
Sbjct: 814 YKKLLNVKPSLEDLKELSPTEGRS 837
>UNIPROTKB|Q15034 [details] [associations]
symbol:HERC3 "Probable E3 ubiquitin-protein ligase HERC3"
species:9606 "Homo sapiens" [GO:0016023 "cytoplasmic
membrane-bounded vesicle" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IBA] [GO:0005634
"nucleus" evidence=IBA] [GO:0042787 "protein ubiquitination
involved in ubiquitin-dependent protein catabolic process"
evidence=IBA] [GO:0005737 "cytoplasm" evidence=IDA] Pfam:PF00632
InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119
UniPathway:UPA00143 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005634
GO:GO:0005737 GO:GO:0016023 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 EMBL:CH471057 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 GO:GO:0042787
SUPFAM:SSF56204 eggNOG:COG5021 EMBL:D25215 EMBL:AK289990
IPI:IPI00014216 RefSeq:NP_001258531.1 RefSeq:NP_055421.1
UniGene:Hs.35804 ProteinModelPortal:Q15034 SMR:Q15034 IntAct:Q15034
MINT:MINT-158126 STRING:Q15034 PhosphoSite:Q15034 DMDM:2495699
PaxDb:Q15034 PRIDE:Q15034 DNASU:8916 Ensembl:ENST00000264345
Ensembl:ENST00000402738 GeneID:8916 KEGG:hsa:8916 UCSC:uc003hrw.1
CTD:8916 GeneCards:GC04P089444 HGNC:HGNC:4876 HPA:HPA039170
MIM:605200 neXtProt:NX_Q15034 PharmGKB:PA29251 HOGENOM:HOG000208452
HOVERGEN:HBG050878 InParanoid:Q15034 KO:K10614 OMA:SPAVDFR
OrthoDB:EOG4RBQHS PhylomeDB:Q15034 ChiTaRS:HERC3 GenomeRNAi:8916
NextBio:33540 ArrayExpress:Q15034 Bgee:Q15034 CleanEx:HS_HERC3
Genevestigator:Q15034 Uniprot:Q15034
Length = 1050
Score = 371 (135.7 bits), Expect = 5.9e-33, P = 5.9e-33
Identities = 108/308 (35%), Positives = 154/308 (50%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+Y G N GQ G ER+ P+Q+ G A A+ + +ACG H+ A++ G
Sbjct: 55 VYTCGLNTKGQLGH---EREGNKPEQI-----G--ALADQHIIHVACGESHSLALSDRGQ 104
Query: 83 LFTWGANEFGQLG-DGTEEGRKHPEKVKQLQSEFVKSISCGA-HCTAAIAEPRENDGTIS 140
LF+WGA GQLG TE+ P +++L + + +SCG HC A A DG
Sbjct: 105 LFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAA-----DGQFF 159
Query: 141 TSRLWVWGQNQ-GS-NFPRLFWGAFTPNTI-------ICQVSCGSVHVVALSECGLLQAW 191
T WG+N G + F +P + + QV+ G H ALS G + W
Sbjct: 160 T-----WGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGW 214
Query: 192 GYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYT 251
G N GQLG ++ E R + K L +K+ +SCGE H+A ++++G V+T
Sbjct: 215 GMNNAGQLG--LSDEK---DRESPCHVKLL----RTQKVVYISCGEEHTAVLTKSGGVFT 265
Query: 252 WGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALT-SKGALYAWGGS 310
+G GS GQLGH S+ E+ PRRV+ L G + +ACG H+ A S G +YA+G
Sbjct: 266 FGAGSCGQLGHDSMND---EVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCG 322
Query: 311 QAGQLGLG 318
GQLG G
Sbjct: 323 ARGQLGTG 330
Score = 356 (130.4 bits), Expect = 2.4e-31, P = 2.4e-31
Identities = 109/341 (31%), Positives = 163/341 (47%)
Query: 83 LFTWGANEFGQLGDGTE-EGR-KHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIS 140
+ WG GQ G T +G P+ + VK ++CG + + + E DG +
Sbjct: 1 MLCWGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLE----DGEVY 56
Query: 141 TSRLWVWGQ---NQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYG 197
T L GQ + N P GA II V+CG H +ALS+ G L +WG G
Sbjct: 57 TCGLNTKGQLGHEREGNKPEQI-GALADQHII-HVACGESHSLALSDRGQLFSWGAGSDG 114
Query: 198 QLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSV 257
QLG T + + PR+I+ L++ + I QVSCG +H A++ +G+ +TWG S
Sbjct: 115 QLGLMTTEDSVAVPRLIQK----LNQ----QTILQVSCGNWHCLALAADGQFFTWGKNSH 166
Query: 258 GQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGL 317
GQLG + + P+RV +L+GI + VA GG HS AL+ GA++ WG + AGQLGL
Sbjct: 167 GQLGLG--KEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGL 224
Query: 318 GPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQA 377
+ ES + + L+ V ++CG HT V + G + +G S GQ
Sbjct: 225 SDEK------DRESPCHVK----LLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQL 274
Query: 378 ANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLADACSL 417
++ P V +G EV ++A G H+ + L
Sbjct: 275 GHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGL 315
Score = 307 (113.1 bits), Expect = 2.5e-24, P = 2.5e-24
Identities = 89/293 (30%), Positives = 141/293 (48%)
Query: 26 WGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGTLFT 85
WGY GQ G + + P++ G + + + ++ACG H+ + DG ++T
Sbjct: 4 WGYWSLGQPGISTNLQGI----VAEPQVCGFISDRSVK--EVACGGNHSVFLLEDGEVYT 57
Query: 86 WGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRE--NDGTISTSR 143
G N GQLG EG K PE++ L + + ++CG + A+++ + + G S +
Sbjct: 58 CGLNTKGQLGH-EREGNK-PEQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQ 115
Query: 144 LWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGI 203
L + PRL TI+ QVSCG+ H +AL+ G WG N +GQLG G
Sbjct: 116 LGLMTTEDSVAVPRLIQ-KLNQQTIL-QVSCGNWHCLALAADGQFFTWGKNSHGQLGLGK 173
Query: 204 TCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHC 263
P+ ++ L+ P + QV+ G HS A+S +G V+ WG+ + GQLG
Sbjct: 174 EFPSQASPQRVRS----LEGIP----LAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLS 225
Query: 264 SLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLG 316
+ D+E P V L + ++CG H+ LT G ++ +G GQLG
Sbjct: 226 DEK--DRES-PCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLG 275
Score = 217 (81.4 bits), Expect = 3.1e-14, P = 3.1e-14
Identities = 66/204 (32%), Positives = 94/204 (46%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
+ A + WG N GQ G G+E + Q L G P +A G H+ A
Sbjct: 152 LAADGQFFTWGKNSHGQLGL-GKEFPSQASPQRVRSLEGIPLA------QVAAGGAHSFA 204
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRE-- 134
++ G +F WG N GQLG E+ R+ P VK L+++ V ISCG TA + +
Sbjct: 205 LSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVF 264
Query: 135 NDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVA-LSECGLLQAWGY 193
G S +L N N PR + + Q++CG H +A + GL+ A+G
Sbjct: 265 TFGAGSCGQLGHDSMNDEVN-PRRVLELM--GSEVTQIACGRQHTLAFVPSSGLIYAFGC 321
Query: 194 NEYGQLGRGITCEGLQGPRVIKGY 217
GQLG G TC ++ P +KGY
Sbjct: 322 GARGQLGTGHTCN-VKCPSPVKGY 344
Score = 213 (80.0 bits), Expect = 8.5e-14, P = 8.5e-14
Identities = 68/247 (27%), Positives = 116/247 (46%)
Query: 20 KSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRW-LDIACGHEHTAAVA 78
+ ++ WG GQ G E + +P+ L +L N + L ++CG+ H A+A
Sbjct: 102 RGQLFSWGAGSDGQLGLMTTEDSVAVPR-LIQKL-------NQQTILQVSCGNWHCLALA 153
Query: 79 SDGTLFTWGANEFGQLGDGTE-EGRKHPEKVKQLQSEFVKSISCG-AHCTA-AIAEPREN 135
+DG FTWG N GQLG G E + P++V+ L+ + ++ G AH A +++
Sbjct: 154 ADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFG 213
Query: 136 DGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNE 195
G + +L + + + P T + +SCG H L++ G + +G
Sbjct: 214 WGMNNAGQLGLSDEKDRES-PCHVKLLRTQKVVY--ISCGEEHTAVLTKSGGVFTFGAGS 270
Query: 196 YGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAA-VSENGEVYTWGL 254
GQLG + + RV++ ++TQ++CG H+ A V +G +Y +G
Sbjct: 271 CGQLGHDSMNDEVNPRRVLELMGS---------EVTQIACGRQHTLAFVPSSGLIYAFGC 321
Query: 255 GSVGQLG 261
G+ GQLG
Sbjct: 322 GARGQLG 328
Score = 171 (65.3 bits), Expect = 3.4e-09, P = 3.4e-09
Identities = 49/163 (30%), Positives = 80/163 (49%)
Query: 230 ITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVA 289
+ QV+ G HS A+S +G V+ WG+ + GQLG + D+E P V L + ++
Sbjct: 192 LAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEK--DRES-PCHVKLLRTQKVVYIS 248
Query: 290 CGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQL 349
CG H+ LT G ++ +G GQLG + + + P R + + ++ + V
Sbjct: 249 CGEEHTAVLTKSGGVFTFGAGSCGQLG--HDSMNDEVNP-------RRV-LELMGSEVTQ 298
Query: 350 VACGHSHTLVYM-RDGRIHGWGYNSYGQAANEKSTYAWYPSPV 391
+ACG HTL ++ G I+ +G + GQ + PSPV
Sbjct: 299 IACGRQHTLAFVPSSGLIYAFGCGARGQLGTGHTCNVKCPSPV 341
>RGD|1310971 [details] [associations]
symbol:Herc4 "HECT and RLD domain containing E3 ubiquitin
protein ligase 4" species:10116 "Rattus norvegicus" [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA;IBA] [GO:0005622
"intracellular" evidence=IEA] [GO:0005634 "nucleus" evidence=IBA]
[GO:0005737 "cytoplasm" evidence=IBA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0007283 "spermatogenesis" evidence=IEA;ISO;ISS]
[GO:0030154 "cell differentiation" evidence=IEA] [GO:0042787
"protein ubiquitination involved in ubiquitin-dependent protein
catabolic process" evidence=IBA] Pfam:PF00632 InterPro:IPR000569
PROSITE:PS50237 SMART:SM00119 UniPathway:UPA00143 RGD:1310971
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005829 GO:GO:0005634
GO:GO:0005737 GO:GO:0030154 GO:GO:0007283 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 GO:GO:0042787
SUPFAM:SSF56204 eggNOG:COG5021 GeneTree:ENSGT00660000095216
HOGENOM:HOG000208452 HOVERGEN:HBG050878 HSSP:Q9UEP9 CTD:26091
KO:K10615 OMA:KLVIQPT OrthoDB:EOG44XJG1 EMBL:BC087104
IPI:IPI00360837 RefSeq:NP_001012074.1 UniGene:Rn.18143
ProteinModelPortal:Q5PQN1 PhosphoSite:Q5PQN1 PRIDE:Q5PQN1
Ensembl:ENSRNOT00000051367 GeneID:309758 KEGG:rno:309758
UCSC:RGD:1310971 InParanoid:Q5PQN1 NextBio:661276
ArrayExpress:Q5PQN1 Genevestigator:Q5PQN1 Uniprot:Q5PQN1
Length = 1057
Score = 371 (135.7 bits), Expect = 5.9e-33, P = 5.9e-33
Identities = 104/333 (31%), Positives = 158/333 (47%)
Query: 83 LFTWGANEFGQLGDG--TEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIS 140
+ WG +GQLG G EE P K ++ V+ + CG T + + DGT+
Sbjct: 1 MLCWGNASYGQLGLGGIDEEIVLEPRKSDFFVNKKVRDVGCGLRHTVFVLD----DGTVY 56
Query: 141 T---SRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYG 197
T + L G + P N I VSCG H +AL++ G + AWG + G
Sbjct: 57 TCGCNDLGQLGHEKSRKKPEQVVALDAQN--IVAVSCGEAHTLALNDKGQVYAWGLDSDG 114
Query: 198 QLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSV 257
QLG + E ++ PR IK + +I QV+CG YHS A+S+ EV+ WG
Sbjct: 115 QLGLQGSEECIRVPRNIKSLSDI--------QIVQVACGYYHSLALSKASEVFCWGQNKY 166
Query: 258 GQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGL 317
GQLG ++ K+ P+ + +L GI VA GG HS LT GA++ WG ++ GQLGL
Sbjct: 167 GQLG-LGIEC-QKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGL 224
Query: 318 GPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQA 377
+E+D Y N+ + + + CG HT ++G + +G YGQ
Sbjct: 225 N----------DENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQL 274
Query: 378 ANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSA 409
+ +++ P V +G V ++A G H++
Sbjct: 275 GHNSTSHEINPRKVFELMGSIVTQIACGRQHTS 307
Score = 357 (130.7 bits), Expect = 1.9e-31, P = 1.9e-31
Identities = 96/294 (32%), Positives = 147/294 (50%)
Query: 26 WGYNHSGQTGRKGRERQLRI-PKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGTLF 84
WG GQ G G + ++ + P++ + F N + D+ CG HT V DGT++
Sbjct: 4 WGNASYGQLGLGGIDEEIVLEPRK--SDFF-----VNKKVRDVGCGLRHTVFVLDDGTVY 56
Query: 85 TWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND--GTISTS 142
T G N+ GQLG E+ RK PE+V L ++ + ++SCG T A+ + + G S
Sbjct: 57 TCGCNDLGQLGH--EKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDG 114
Query: 143 RLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRG 202
+L + G + PR + I QV+CG H +ALS+ + WG N+YGQLG G
Sbjct: 115 QLGLQGSEECIRVPRNIKSL--SDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG 172
Query: 203 ITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGH 262
I C+ P++IK L P + QV+ G HS ++ +G ++ WG GQLG
Sbjct: 173 IECQKQTSPQLIKS----LLGIPFM----QVAAGGAHSFVLTLSGAIFGWGRNKFGQLG- 223
Query: 263 CSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLG 316
L + +P + +L I + CG H+ ALT +G ++ +G GQLG
Sbjct: 224 --LNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG 275
Score = 321 (118.1 bits), Expect = 5.4e-26, P = 5.4e-26
Identities = 82/256 (32%), Positives = 126/256 (49%)
Query: 67 IACGHEHTAAVASDGTLFTWGANEFGQLG-DGTEEGRKHPEKVKQLQSEFVKSISCGAHC 125
++CG HT A+ G ++ WG + GQLG G+EE + P +K L + ++CG +
Sbjct: 89 VSCGEAHTLALNDKGQVYAWGLDSDGQLGLQGSEECIRVPRNIKSLSDIQIVQVACGYYH 148
Query: 126 TAAIAEPREND--GTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALS 183
+ A+++ E G +L + + Q P+L QV+ G H L+
Sbjct: 149 SLALSKASEVFCWGQNKYGQLGLGIECQKQTSPQLIKSLL--GIPFMQVAAGGAHSFVLT 206
Query: 184 ECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAV 243
G + WG N++GQLG + R + K L +KI + CGE H+AA+
Sbjct: 207 LSGAIFGWGRNKFGQLGLND-----ENDRYVPNLLKSLRS----QKIVYICCGEDHTAAL 257
Query: 244 SENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALT-SKG 302
++ G V+T+G G GQLGH S E+ PR+V L G + +ACG H+ A S G
Sbjct: 258 TKEGGVFTFGAGGYGQLGH---NSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSG 314
Query: 303 ALYAWGGSQAGQLGLG 318
+Y++G GQLG G
Sbjct: 315 RIYSFGLGGNGQLGTG 330
Score = 269 (99.8 bits), Expect = 5.4e-20, P = 5.4e-20
Identities = 82/224 (36%), Positives = 106/224 (47%)
Query: 191 WGYNEYGQLGRG-ITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEV 249
WG YGQLG G I E + PR + +K+ V CG H+ V ++G V
Sbjct: 4 WGNASYGQLGLGGIDEEIVLEPRKSDFFVN--------KKVRDVGCGLRHTVFVLDDGTV 55
Query: 250 YTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGG 309
YT G +GQLGH + K+ P +VVALD I V+CG H+ AL KG +YAWG
Sbjct: 56 YTCGCNDLGQLGH---EKSRKK--PEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGL 110
Query: 310 SQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGW 369
GQLGL +P RNI L VQ VACG+ H+L + + W
Sbjct: 111 DSDGQLGLQGSEECIR-VP-------RNIKSLSDIQIVQ-VACGYYHSLALSKASEVFCW 161
Query: 370 GYNSYGQAA-NEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVL 411
G N YGQ + P + +G ++AAGG HS VL
Sbjct: 162 GQNKYGQLGLGIECQKQTSPQLIKSLLGIPFMQVAAGGAHSFVL 205
Score = 256 (95.2 bits), Expect = 1.5e-18, P = 1.5e-18
Identities = 76/256 (29%), Positives = 127/256 (49%)
Query: 20 KSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVAS 79
K +Y WG + GQ G +G E +R+P+ + L ++ + + +ACG+ H+ A++
Sbjct: 102 KGQVYAWGLDSDGQLGLQGSEECIRVPRNIK-SL------SDIQIVQVACGYYHSLALSK 154
Query: 80 DGTLFTWGANEFGQLGDGTE-EGRKHPEKVKQLQS-EFVKSISCGAHCTAAIAEPRENDG 137
+F WG N++GQLG G E + + P+ +K L F++ + GAH
Sbjct: 155 ASEVFCWGQNKYGQLGLGIECQKQTSPQLIKSLLGIPFMQVAAGGAHSFVL--------- 205
Query: 138 TISTSRLWVWGQNQ----GSNFPRLFWGAFTPNTI-------ICQVSCGSVHVVALSECG 186
T+S + ++ WG+N+ G N + PN + I + CG H AL++ G
Sbjct: 206 TLSGA-IFGWGRNKFGQLGLNDEN---DRYVPNLLKSLRSQKIVYICCGEDHTAALTKEG 261
Query: 187 LLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAA-VSE 245
+ +G YGQLG T + PR K + + +TQ++CG H++A V
Sbjct: 262 GVFTFGAGGYGQLGHNSTSHEIN-PR------KVFELMGSI--VTQIACGRQHTSAFVPS 312
Query: 246 NGEVYTWGLGSVGQLG 261
+G +Y++GLG GQLG
Sbjct: 313 SGRIYSFGLGGNGQLG 328
Score = 219 (82.2 bits), Expect = 1.9e-14, P = 1.9e-14
Identities = 66/213 (30%), Positives = 101/213 (47%)
Query: 21 SAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASD 80
S ++ WG N GQ G G E Q + QL L G P ++ +A G H+ +
Sbjct: 156 SEVFCWGQNKYGQLGL-GIECQKQTSPQLIKSLLGIP------FMQVAAGGAHSFVLTLS 208
Query: 81 GTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIS 140
G +F WG N+FGQLG E R P +K L+S+ + I CG TAA+ + +G +
Sbjct: 209 GAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTK----EGGVF 264
Query: 141 TSRLWVWGQ---NQGSNF--PRLFWGAFTPNTIICQVSCGSVHVVA-LSECGLLQAWGYN 194
T +GQ N S+ PR + +I+ Q++CG H A + G + ++G
Sbjct: 265 TFGAGGYGQLGHNSTSHEINPRKVFELM--GSIVTQIACGRQHTSAFVPSSGRIYSFGLG 322
Query: 195 EYGQLGRGITCEGLQGPRVIKG-YAKFLDEAPE 226
GQLG G T + P +KG + + + P+
Sbjct: 323 GNGQLGTGST-SNRKSPFTVKGNWFSYNGQCPQ 354
Score = 156 (60.0 bits), Expect = 1.5e-07, P = 1.5e-07
Identities = 46/159 (28%), Positives = 73/159 (45%)
Query: 232 QVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACG 291
QV+ G HS ++ +G ++ WG GQLG L + +P + +L I + CG
Sbjct: 194 QVAAGGAHSFVLTLSGAIFGWGRNKFGQLG---LNDENDRYVPNLLKSLRSQKIVYICCG 250
Query: 292 GVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVA 351
H+ ALT +G ++ +G GQLG + S + P + +I V +A
Sbjct: 251 EDHTAALTKEGGVFTFGAGGYGQLG--HNSTSHEINPRKVFELMGSI--------VTQIA 300
Query: 352 CGHSHTLVYM-RDGRIHGWGYNSYGQ-----AANEKSTY 384
CG HT ++ GRI+ +G GQ +N KS +
Sbjct: 301 CGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPF 339
>UNIPROTKB|E2RMB0 [details] [associations]
symbol:HERC3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] Pfam:PF00632
InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119 INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005737 GO:GO:0016567 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 SUPFAM:SSF56204
GeneTree:ENSGT00660000095216 CTD:8916 KO:K10614 OMA:SPAVDFR
EMBL:AAEX03016754 EMBL:AAEX03016753 RefSeq:XP_535653.3
Ensembl:ENSCAFT00000015540 GeneID:478475 KEGG:cfa:478475
Uniprot:E2RMB0
Length = 1050
Score = 370 (135.3 bits), Expect = 7.5e-33, P = 7.5e-33
Identities = 107/308 (34%), Positives = 153/308 (49%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+Y G N GQ G ER+ P+Q+ G A A+ + +ACG H+ A++ G
Sbjct: 55 VYTCGLNTKGQLGH---EREGNKPEQI-----G--ALADQHIVHVACGESHSLALSDRGQ 104
Query: 83 LFTWGANEFGQLG-DGTEEGRKHPEKVKQLQSEFVKSISCGA-HCTAAIAEPRENDGTIS 140
LF+WGA GQLG TE+ P +++L + + +SCG HC A A DG
Sbjct: 105 LFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAA-----DGQFF 159
Query: 141 TSRLWVWGQNQ-GS-NFPRLFWGAFTPNTI-------ICQVSCGSVHVVALSECGLLQAW 191
T WG+N G + + +P + + QV+ G H ALS G + W
Sbjct: 160 T-----WGKNSHGQLGLGKEYPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGW 214
Query: 192 GYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYT 251
G N GQLG E + P + K L +K+ +SCGE H+A ++++G V+T
Sbjct: 215 GMNNAGQLGLSDE-EDRESPC----HVKLL----RTQKVVYISCGEEHTAVLTKSGGVFT 265
Query: 252 WGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALT-SKGALYAWGGS 310
+G GS GQLGH S+ E+ PRRV+ L G + +ACG H+ A S G +YA+G
Sbjct: 266 FGAGSCGQLGHDSMND---EVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCG 322
Query: 311 QAGQLGLG 318
GQLG G
Sbjct: 323 AKGQLGTG 330
Score = 355 (130.0 bits), Expect = 3.0e-31, P = 3.0e-31
Identities = 108/341 (31%), Positives = 163/341 (47%)
Query: 83 LFTWGANEFGQLGDGTE-EGR-KHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIS 140
+ WG GQ G T +G P+ + VK ++CG + + + E DG +
Sbjct: 1 MLCWGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLE----DGEVY 56
Query: 141 TSRLWVWGQ---NQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYG 197
T L GQ + N P GA I+ V+CG H +ALS+ G L +WG G
Sbjct: 57 TCGLNTKGQLGHEREGNKPEQI-GALADQHIV-HVACGESHSLALSDRGQLFSWGAGSDG 114
Query: 198 QLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSV 257
QLG T + + PR+I+ L++ + I QVSCG +H A++ +G+ +TWG S
Sbjct: 115 QLGLMTTEDSVAVPRLIQK----LNQ----QTILQVSCGNWHCLALAADGQFFTWGKNSH 166
Query: 258 GQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGL 317
GQLG + + P+RV +L+GI + VA GG HS AL+ GA++ WG + AGQLGL
Sbjct: 167 GQLGLG--KEYPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGL 224
Query: 318 GPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQA 377
+ ES + + L+ V ++CG HT V + G + +G S GQ
Sbjct: 225 SDEE------DRESPCHVK----LLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQL 274
Query: 378 ANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLADACSL 417
++ P V +G EV ++A G H+ + L
Sbjct: 275 GHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGL 315
Score = 309 (113.8 bits), Expect = 1.5e-24, P = 1.5e-24
Identities = 89/293 (30%), Positives = 141/293 (48%)
Query: 26 WGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGTLFT 85
WGY GQ G + + P++ G + + + ++ACG H+ + DG ++T
Sbjct: 4 WGYWSLGQPGISTNLQGI----VAEPQVCGFISDRSVK--EVACGGNHSVFLLEDGEVYT 57
Query: 86 WGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRE--NDGTISTSR 143
G N GQLG EG K PE++ L + + ++CG + A+++ + + G S +
Sbjct: 58 CGLNTKGQLGH-EREGNK-PEQIGALADQHIVHVACGESHSLALSDRGQLFSWGAGSDGQ 115
Query: 144 LWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGI 203
L + PRL TI+ QVSCG+ H +AL+ G WG N +GQLG G
Sbjct: 116 LGLMTTEDSVAVPRLIQ-KLNQQTIL-QVSCGNWHCLALAADGQFFTWGKNSHGQLGLGK 173
Query: 204 TCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHC 263
P+ ++ L+ P + QV+ G HS A+S +G V+ WG+ + GQLG
Sbjct: 174 EYPSQASPQRVRS----LEGIP----LAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLS 225
Query: 264 SLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLG 316
+ D+E P V L + ++CG H+ LT G ++ +G GQLG
Sbjct: 226 DEE--DRES-PCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLG 275
Score = 222 (83.2 bits), Expect = 8.7e-15, P = 8.7e-15
Identities = 67/204 (32%), Positives = 94/204 (46%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
+ A + WG N GQ G G+E + Q L G P +A G H+ A
Sbjct: 152 LAADGQFFTWGKNSHGQLGL-GKEYPSQASPQRVRSLEGIPLA------QVAAGGAHSFA 204
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRE-- 134
++ G +F WG N GQLG EE R+ P VK L+++ V ISCG TA + +
Sbjct: 205 LSLSGAVFGWGMNNAGQLGLSDEEDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVF 264
Query: 135 NDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVA-LSECGLLQAWGY 193
G S +L N N PR + + Q++CG H +A + GL+ A+G
Sbjct: 265 TFGAGSCGQLGHDSMNDEVN-PRRVLELM--GSEVTQIACGRQHTLAFVPSSGLIYAFGC 321
Query: 194 NEYGQLGRGITCEGLQGPRVIKGY 217
GQLG G TC ++ P +KGY
Sbjct: 322 GAKGQLGTGHTCN-VKCPSPVKGY 344
Score = 215 (80.7 bits), Expect = 5.1e-14, P = 5.1e-14
Identities = 68/247 (27%), Positives = 115/247 (46%)
Query: 20 KSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRW-LDIACGHEHTAAVA 78
+ ++ WG GQ G E + +P+ L +L N + L ++CG+ H A+A
Sbjct: 102 RGQLFSWGAGSDGQLGLMTTEDSVAVPR-LIQKL-------NQQTILQVSCGNWHCLALA 153
Query: 79 SDGTLFTWGANEFGQLGDGTE-EGRKHPEKVKQLQSEFVKSISCG-AHCTA-AIAEPREN 135
+DG FTWG N GQLG G E + P++V+ L+ + ++ G AH A +++
Sbjct: 154 ADGQFFTWGKNSHGQLGLGKEYPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFG 213
Query: 136 DGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNE 195
G + +L + + P T + +SCG H L++ G + +G
Sbjct: 214 WGMNNAGQLGL-SDEEDRESPCHVKLLRTQKVVY--ISCGEEHTAVLTKSGGVFTFGAGS 270
Query: 196 YGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAA-VSENGEVYTWGL 254
GQLG + + RV++ ++TQ++CG H+ A V +G +Y +G
Sbjct: 271 CGQLGHDSMNDEVNPRRVLELMGS---------EVTQIACGRQHTLAFVPSSGLIYAFGC 321
Query: 255 GSVGQLG 261
G+ GQLG
Sbjct: 322 GAKGQLG 328
Score = 172 (65.6 bits), Expect = 2.6e-09, P = 2.6e-09
Identities = 49/163 (30%), Positives = 80/163 (49%)
Query: 230 ITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVA 289
+ QV+ G HS A+S +G V+ WG+ + GQLG + D+E P V L + ++
Sbjct: 192 LAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEE--DRES-PCHVKLLRTQKVVYIS 248
Query: 290 CGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQL 349
CG H+ LT G ++ +G GQLG + + + P R + + ++ + V
Sbjct: 249 CGEEHTAVLTKSGGVFTFGAGSCGQLG--HDSMNDEVNP-------RRV-LELMGSEVTQ 298
Query: 350 VACGHSHTLVYM-RDGRIHGWGYNSYGQAANEKSTYAWYPSPV 391
+ACG HTL ++ G I+ +G + GQ + PSPV
Sbjct: 299 IACGRQHTLAFVPSSGLIYAFGCGAKGQLGTGHTCNVKCPSPV 341
>UNIPROTKB|A2VDP7 [details] [associations]
symbol:HERC3 "HERC3 protein" species:9913 "Bos taurus"
[GO:0042787 "protein ubiquitination involved in ubiquitin-dependent
protein catabolic process" evidence=IBA] [GO:0005737 "cytoplasm"
evidence=IBA] [GO:0005634 "nucleus" evidence=IBA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IBA] Pfam:PF00632
InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119 INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005634 GO:GO:0005737 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 GO:GO:0042787 SUPFAM:SSF56204
eggNOG:COG5021 GeneTree:ENSGT00660000095216 CTD:8916
HOGENOM:HOG000208452 HOVERGEN:HBG050878 KO:K10614 OMA:SPAVDFR
OrthoDB:EOG4RBQHS EMBL:DAAA02017014 EMBL:BC133341 IPI:IPI00710875
RefSeq:NP_001077132.1 UniGene:Bt.85959 Ensembl:ENSBTAT00000013357
GeneID:510924 KEGG:bta:510924 InParanoid:A2VDP7 NextBio:20869685
Uniprot:A2VDP7
Length = 1050
Score = 367 (134.2 bits), Expect = 1.6e-32, P = 1.6e-32
Identities = 108/308 (35%), Positives = 153/308 (49%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+Y G N GQ G ER+ P+Q+ G A A+ + +ACG H+ A++ G
Sbjct: 55 VYTCGVNTKGQLGH---EREGNKPEQI-----G--ALADQHIVHVACGESHSLALSDQGQ 104
Query: 83 LFTWGANEFGQLGDGT-EEGRKHPEKVKQLQSEFVKSISCGA-HCTAAIAEPRENDGTIS 140
LF+WGA GQLG T E+ P +++L + + +SCG HC A A DG
Sbjct: 105 LFSWGAGSDGQLGLMTIEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAA-----DGQFF 159
Query: 141 TSRLWVWGQNQ-GS-NFPRLFWGAFTPNTI-------ICQVSCGSVHVVALSECGLLQAW 191
T WG+N G + F +P + + QV G H ALS G + W
Sbjct: 160 T-----WGRNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVVAGGAHSFALSLSGAVFGW 214
Query: 192 GYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYT 251
G N GQLG ++ E R + K L +K+ +SCGE H+A ++++G V+T
Sbjct: 215 GMNNAGQLG--LSDEK---DRESPCHVKLL----RTQKVVYISCGEEHTAVLTKSGGVFT 265
Query: 252 WGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALT-SKGALYAWGGS 310
+G GS GQLGH S+ E+ PRRV+ L G + +ACG H+ A S G +YA+G
Sbjct: 266 FGAGSCGQLGHDSMND---EVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCG 322
Query: 311 QAGQLGLG 318
GQLG G
Sbjct: 323 ARGQLGTG 330
Score = 336 (123.3 bits), Expect = 6.8e-28, P = 6.8e-28
Identities = 104/341 (30%), Positives = 160/341 (46%)
Query: 83 LFTWGANEFGQLGDGTE-EGR-KHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIS 140
+ WG GQ G +G P+ + VK ++CG + + + E DG +
Sbjct: 1 MLCWGYWSLGQPGISPNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLE----DGEVY 56
Query: 141 TSRLWVWGQ---NQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYG 197
T + GQ + N P GA I+ V+CG H +ALS+ G L +WG G
Sbjct: 57 TCGVNTKGQLGHEREGNKPEQI-GALADQHIV-HVACGESHSLALSDQGQLFSWGAGSDG 114
Query: 198 QLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSV 257
QLG + + PR+I+ L++ + I QVSCG +H A++ +G+ +TWG S
Sbjct: 115 QLGLMTIEDSVAVPRLIQK----LNQ----QTILQVSCGNWHCLALAADGQFFTWGRNSH 166
Query: 258 GQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGL 317
GQLG + + P+RV +L+GI + V GG HS AL+ GA++ WG + AGQLGL
Sbjct: 167 GQLGLG--KEFPSQASPQRVRSLEGIPLAQVVAGGAHSFALSLSGAVFGWGMNNAGQLGL 224
Query: 318 GPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQA 377
+ ES + + L+ V ++CG HT V + G + +G S GQ
Sbjct: 225 SDEK------DRESPCHVK----LLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQL 274
Query: 378 ANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLADACSL 417
++ P V +G EV ++A G H+ + L
Sbjct: 275 GHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGL 315
Score = 305 (112.4 bits), Expect = 4.2e-24, P = 4.2e-24
Identities = 89/293 (30%), Positives = 140/293 (47%)
Query: 26 WGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGTLFT 85
WGY GQ G + + P++ G + + + ++ACG H+ + DG ++T
Sbjct: 4 WGYWSLGQPGISPNLQGI----VAEPQVCGFISDRSVK--EVACGGNHSVFLLEDGEVYT 57
Query: 86 WGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRE--NDGTISTSR 143
G N GQLG EG K PE++ L + + ++CG + A+++ + + G S +
Sbjct: 58 CGVNTKGQLGH-EREGNK-PEQIGALADQHIVHVACGESHSLALSDQGQLFSWGAGSDGQ 115
Query: 144 LWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGI 203
L + PRL TI+ QVSCG+ H +AL+ G WG N +GQLG G
Sbjct: 116 LGLMTIEDSVAVPRLIQ-KLNQQTIL-QVSCGNWHCLALAADGQFFTWGRNSHGQLGLGK 173
Query: 204 TCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHC 263
P+ ++ L+ P + QV G HS A+S +G V+ WG+ + GQLG
Sbjct: 174 EFPSQASPQRVRS----LEGIP----LAQVVAGGAHSFALSLSGAVFGWGMNNAGQLGLS 225
Query: 264 SLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLG 316
+ D+E P V L + ++CG H+ LT G ++ +G GQLG
Sbjct: 226 DEK--DRES-PCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLG 275
Score = 213 (80.0 bits), Expect = 8.5e-14, P = 8.5e-14
Identities = 65/204 (31%), Positives = 93/204 (45%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
+ A + WG N GQ G G+E + Q L G P + G H+ A
Sbjct: 152 LAADGQFFTWGRNSHGQLGL-GKEFPSQASPQRVRSLEGIPLA------QVVAGGAHSFA 204
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRE-- 134
++ G +F WG N GQLG E+ R+ P VK L+++ V ISCG TA + +
Sbjct: 205 LSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVF 264
Query: 135 NDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVA-LSECGLLQAWGY 193
G S +L N N PR + + Q++CG H +A + GL+ A+G
Sbjct: 265 TFGAGSCGQLGHDSMNDEVN-PRRVLELM--GSEVTQIACGRQHTLAFVPSSGLIYAFGC 321
Query: 194 NEYGQLGRGITCEGLQGPRVIKGY 217
GQLG G TC ++ P +KGY
Sbjct: 322 GARGQLGTGHTCN-VKCPSPVKGY 344
Score = 168 (64.2 bits), Expect = 7.1e-09, P = 7.1e-09
Identities = 49/163 (30%), Positives = 79/163 (48%)
Query: 230 ITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVA 289
+ QV G HS A+S +G V+ WG+ + GQLG + D+E P V L + ++
Sbjct: 192 LAQVVAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEK--DRES-PCHVKLLRTQKVVYIS 248
Query: 290 CGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQL 349
CG H+ LT G ++ +G GQLG + + + P R + + ++ + V
Sbjct: 249 CGEEHTAVLTKSGGVFTFGAGSCGQLG--HDSMNDEVNP-------RRV-LELMGSEVTQ 298
Query: 350 VACGHSHTLVYM-RDGRIHGWGYNSYGQAANEKSTYAWYPSPV 391
+ACG HTL ++ G I+ +G + GQ + PSPV
Sbjct: 299 IACGRQHTLAFVPSSGLIYAFGCGARGQLGTGHTCNVKCPSPV 341
>UNIPROTKB|F1NBC5 [details] [associations]
symbol:HERC3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
Pfam:PF00632 InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0016567 GO:GO:0005622
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 SUPFAM:SSF56204
GeneTree:ENSGT00660000095216 EMBL:AADN02016126 EMBL:AADN02016127
EMBL:AADN02016128 EMBL:AADN02016129 IPI:IPI00572483
Ensembl:ENSGALT00000016878 ArrayExpress:F1NBC5 Uniprot:F1NBC5
Length = 1050
Score = 366 (133.9 bits), Expect = 2.0e-32, P = 2.0e-32
Identities = 107/308 (34%), Positives = 150/308 (48%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+Y G N GQ G + + PE G AG + + +ACG H+ A++ G
Sbjct: 55 VYTCGLNTKGQLGHESEGSK--------PEPIGALAGQHI--VHVACGESHSVALSDQGQ 104
Query: 83 LFTWGANEFGQLGDGT-EEGRKHPEKVKQLQSEFVKSISCGA-HCTAAIAEPRENDGTIS 140
+F+WGA GQLG T E+ P +K+L + + ISCG HC A A DG
Sbjct: 105 VFSWGAGSDGQLGLTTIEDAVTVPRLIKKLNQQTILQISCGNWHCLALAA-----DGQFF 159
Query: 141 TSRLWVWGQNQ-GS-NFPRLFWGAFTPNTI-------ICQVSCGSVHVVALSECGLLQAW 191
T WGQN G + +P + + QV+ G H ALS G + W
Sbjct: 160 T-----WGQNSYGQLGLGKECPSQASPQRVKSLDGIPLAQVAAGGAHSFALSLSGAVFGW 214
Query: 192 GYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYT 251
G N GQLG ++ E R + K L +K+ +SCGE H+A ++++G V+T
Sbjct: 215 GKNSSGQLG--LSDER---DRESPCHVKLLRS----QKVVYISCGEEHTAVLTKSGGVFT 265
Query: 252 WGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALT-SKGALYAWGGS 310
+G GS GQLGH S+ E+ PRRV+ L G + +ACG H+ A S G +YA+G
Sbjct: 266 FGAGSCGQLGHDSMND---EVNPRRVLELMGSEVSQIACGRHHTLAFVPSSGMIYAFGCG 322
Query: 311 QAGQLGLG 318
GQLG G
Sbjct: 323 TRGQLGTG 330
Score = 364 (133.2 bits), Expect = 3.3e-32, P = 3.3e-32
Identities = 109/336 (32%), Positives = 165/336 (49%)
Query: 83 LFTWGANEFGQLGDGT--EEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIS 140
+ WG + FGQ G G+ + P+ + VK ++CG + + + E DG +
Sbjct: 1 MLCWGYSSFGQPGIGSNLQVIIPEPQVYGFIHDRNVKEVACGGNHSVFLLE----DGEVY 56
Query: 141 TSRLWVWGQ----NQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEY 196
T L GQ ++GS P GA I+ V+CG H VALS+ G + +WG
Sbjct: 57 TCGLNTKGQLGHESEGSK-PEPI-GALAGQHIV-HVACGESHSVALSDQGQVFSWGAGSD 113
Query: 197 GQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGS 256
GQLG + + PR+IK L++ + I Q+SCG +H A++ +G+ +TWG S
Sbjct: 114 GQLGLTTIEDAVTVPRLIKK----LNQ----QTILQISCGNWHCLALAADGQFFTWGQNS 165
Query: 257 VGQLG---HCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAG 313
GQLG C Q+ P+RV +LDGI + VA GG HS AL+ GA++ WG + +G
Sbjct: 166 YGQLGLGKECPSQAS-----PQRVKSLDGIPLAQVAAGGAHSFALSLSGAVFGWGKNSSG 220
Query: 314 QLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNS 373
QLGL + ES + + L+ V ++CG HT V + G + +G S
Sbjct: 221 QLGLSDER------DRESPCHVK----LLRSQKVVYISCGEEHTAVLTKSGGVFTFGAGS 270
Query: 374 YGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHS 408
GQ ++ P V +G EV ++A G H+
Sbjct: 271 CGQLGHDSMNDEVNPRRVLELMGSEVSQIACGRHHT 306
Score = 359 (131.4 bits), Expect = 1.1e-31, P = 1.1e-31
Identities = 98/293 (33%), Positives = 146/293 (49%)
Query: 26 WGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGTLFT 85
WGY+ GQ G G Q+ IP+ P+++G N + ++ACG H+ + DG ++T
Sbjct: 4 WGYSSFGQPGI-GSNLQVIIPE---PQVYGFIHDRNVK--EVACGGNHSVFLLEDGEVYT 57
Query: 86 WGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRE--NDGTISTSR 143
G N GQLG +E G K PE + L + + ++CG + A+++ + + G S +
Sbjct: 58 CGLNTKGQLGHESE-GSK-PEPIGALAGQHIVHVACGESHSVALSDQGQVFSWGAGSDGQ 115
Query: 144 LWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGI 203
L + PRL TI+ Q+SCG+ H +AL+ G WG N YGQLG G
Sbjct: 116 LGLTTIEDAVTVPRLI-KKLNQQTIL-QISCGNWHCLALAADGQFFTWGQNSYGQLGLGK 173
Query: 204 TCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHC 263
C P+ +K LD P + QV+ G HS A+S +G V+ WG S GQLG
Sbjct: 174 ECPSQASPQRVKS----LDGIP----LAQVAAGGAHSFALSLSGAVFGWGKNSSGQLGLS 225
Query: 264 SLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLG 316
+ D+E P V L + ++CG H+ LT G ++ +G GQLG
Sbjct: 226 DER--DRES-PCHVKLLRSQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLG 275
Score = 212 (79.7 bits), Expect = 1.1e-13, P = 1.1e-13
Identities = 65/204 (31%), Positives = 93/204 (45%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
+ A + WG N GQ G G+E + Q L G P +A G H+ A
Sbjct: 152 LAADGQFFTWGQNSYGQLGL-GKECPSQASPQRVKSLDGIPLA------QVAAGGAHSFA 204
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRE-- 134
++ G +F WG N GQLG E R+ P VK L+S+ V ISCG TA + +
Sbjct: 205 LSLSGAVFGWGKNSSGQLGLSDERDRESPCHVKLLRSQKVVYISCGEEHTAVLTKSGGVF 264
Query: 135 NDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVA-LSECGLLQAWGY 193
G S +L N N PR + + Q++CG H +A + G++ A+G
Sbjct: 265 TFGAGSCGQLGHDSMNDEVN-PRRVLELM--GSEVSQIACGRHHTLAFVPSSGMIYAFGC 321
Query: 194 NEYGQLGRGITCEGLQGPRVIKGY 217
GQLG G TC ++ P +KG+
Sbjct: 322 GTRGQLGTGHTCN-VKCPSPVKGH 344
Score = 172 (65.6 bits), Expect = 2.6e-09, P = 2.6e-09
Identities = 57/187 (30%), Positives = 87/187 (46%)
Query: 230 ITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVA 289
+ QV+ G HS A+S +G V+ WG S GQLG + D+E P V L + ++
Sbjct: 192 LAQVAAGGAHSFALSLSGAVFGWGKNSSGQLGLSDER--DRES-PCHVKLLRSQKVVYIS 248
Query: 290 CGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQL 349
CG H+ LT G ++ +G GQLG + + + P R + + ++ + V
Sbjct: 249 CGEEHTAVLTKSGGVFTFGAGSCGQLG--HDSMNDEVNP-------RRV-LELMGSEVSQ 298
Query: 350 VACGHSHTLVYM-RDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHS 408
+ACG HTL ++ G I+ +G + GQ + PSPV G AA G
Sbjct: 299 IACGRHHTLAFVPSSGMIYAFGCGTRGQLGTGHTCNVKCPSPVK---GH---WAAHNGQL 352
Query: 409 AVLADAC 415
+ DAC
Sbjct: 353 SGKPDAC 359
>UNIPROTKB|E1C514 [details] [associations]
symbol:HERC3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] Pfam:PF00632
InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119 INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005737 GO:GO:0016567 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 SUPFAM:SSF56204
GeneTree:ENSGT00660000095216 OMA:SPAVDFR EMBL:AADN02016126
EMBL:AADN02016127 EMBL:AADN02016128 EMBL:AADN02016129
IPI:IPI00576498 Ensembl:ENSGALT00000016877 ArrayExpress:E1C514
Uniprot:E1C514
Length = 1050
Score = 365 (133.5 bits), Expect = 2.6e-32, P = 2.6e-32
Identities = 106/333 (31%), Positives = 160/333 (48%)
Query: 83 LFTWGANEFGQLGDGT--EEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIS 140
+ WG + FGQ G G+ + P+ + VK ++CG + + + E DG +
Sbjct: 1 MLCWGYSSFGQPGIGSNLQVIIPEPQVYGFIHDRNVKEVACGGNHSVFLLE----DGEVY 56
Query: 141 TSRLWVWGQ-NQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQL 199
T L GQ S + W I V+CG H VALS+ G + +WG GQL
Sbjct: 57 TCGLNTKGQLGHESEGSKPAWVGTLAGQHIVHVACGESHSVALSDQGQVFSWGAGSDGQL 116
Query: 200 GRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQ 259
G + + PR+IK L++ + I Q+SCG +H A++ +G+ +TWG S GQ
Sbjct: 117 GLTTIEDAVTVPRLIKK----LNQ----QTILQISCGNWHCLALAADGQFFTWGQNSYGQ 168
Query: 260 LG---HCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLG 316
LG C Q+ P+RV +LDGI + VA GG HS AL+ GA++ WG + +GQLG
Sbjct: 169 LGLGKECPSQAS-----PQRVKSLDGIPLAQVAAGGAHSFALSLSGAVFGWGKNSSGQLG 223
Query: 317 LGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQ 376
L + ES + + L+ V ++CG HT V + G + +G S GQ
Sbjct: 224 LSDER------DRESPCHVK----LLRSQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQ 273
Query: 377 AANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHS 408
++ P V +G EV ++A G H+
Sbjct: 274 LGHDSMNDEVNPRRVLELMGSEVSQIACGRHHT 306
Score = 359 (131.4 bits), Expect = 1.1e-31, P = 1.1e-31
Identities = 106/308 (34%), Positives = 149/308 (48%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+Y G N GQ G + + P G AG + + +ACG H+ A++ G
Sbjct: 55 VYTCGLNTKGQLGHESEGSK--------PAWVGTLAGQHI--VHVACGESHSVALSDQGQ 104
Query: 83 LFTWGANEFGQLGDGT-EEGRKHPEKVKQLQSEFVKSISCGA-HCTAAIAEPRENDGTIS 140
+F+WGA GQLG T E+ P +K+L + + ISCG HC A A DG
Sbjct: 105 VFSWGAGSDGQLGLTTIEDAVTVPRLIKKLNQQTILQISCGNWHCLALAA-----DGQFF 159
Query: 141 TSRLWVWGQNQ-GS-NFPRLFWGAFTPNTI-------ICQVSCGSVHVVALSECGLLQAW 191
T WGQN G + +P + + QV+ G H ALS G + W
Sbjct: 160 T-----WGQNSYGQLGLGKECPSQASPQRVKSLDGIPLAQVAAGGAHSFALSLSGAVFGW 214
Query: 192 GYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYT 251
G N GQLG ++ E R + K L +K+ +SCGE H+A ++++G V+T
Sbjct: 215 GKNSSGQLG--LSDER---DRESPCHVKLLRS----QKVVYISCGEEHTAVLTKSGGVFT 265
Query: 252 WGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALT-SKGALYAWGGS 310
+G GS GQLGH S+ E+ PRRV+ L G + +ACG H+ A S G +YA+G
Sbjct: 266 FGAGSCGQLGHDSMND---EVNPRRVLELMGSEVSQIACGRHHTLAFVPSSGMIYAFGCG 322
Query: 311 QAGQLGLG 318
GQLG G
Sbjct: 323 TRGQLGTG 330
Score = 352 (129.0 bits), Expect = 6.3e-31, P = 6.3e-31
Identities = 98/293 (33%), Positives = 145/293 (49%)
Query: 26 WGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGTLFT 85
WGY+ GQ G G Q+ IP+ P+++G N + ++ACG H+ + DG ++T
Sbjct: 4 WGYSSFGQPGI-GSNLQVIIPE---PQVYGFIHDRNVK--EVACGGNHSVFLLEDGEVYT 57
Query: 86 WGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRE--NDGTISTSR 143
G N GQLG +E G K P V L + + ++CG + A+++ + + G S +
Sbjct: 58 CGLNTKGQLGHESE-GSK-PAWVGTLAGQHIVHVACGESHSVALSDQGQVFSWGAGSDGQ 115
Query: 144 LWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGI 203
L + PRL TI+ Q+SCG+ H +AL+ G WG N YGQLG G
Sbjct: 116 LGLTTIEDAVTVPRLI-KKLNQQTIL-QISCGNWHCLALAADGQFFTWGQNSYGQLGLGK 173
Query: 204 TCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHC 263
C P+ +K LD P + QV+ G HS A+S +G V+ WG S GQLG
Sbjct: 174 ECPSQASPQRVKS----LDGIP----LAQVAAGGAHSFALSLSGAVFGWGKNSSGQLGLS 225
Query: 264 SLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLG 316
+ D+E P V L + ++CG H+ LT G ++ +G GQLG
Sbjct: 226 DER--DRES-PCHVKLLRSQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLG 275
Score = 212 (79.7 bits), Expect = 1.1e-13, P = 1.1e-13
Identities = 65/204 (31%), Positives = 93/204 (45%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
+ A + WG N GQ G G+E + Q L G P +A G H+ A
Sbjct: 152 LAADGQFFTWGQNSYGQLGL-GKECPSQASPQRVKSLDGIPLA------QVAAGGAHSFA 204
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRE-- 134
++ G +F WG N GQLG E R+ P VK L+S+ V ISCG TA + +
Sbjct: 205 LSLSGAVFGWGKNSSGQLGLSDERDRESPCHVKLLRSQKVVYISCGEEHTAVLTKSGGVF 264
Query: 135 NDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVA-LSECGLLQAWGY 193
G S +L N N PR + + Q++CG H +A + G++ A+G
Sbjct: 265 TFGAGSCGQLGHDSMNDEVN-PRRVLELM--GSEVSQIACGRHHTLAFVPSSGMIYAFGC 321
Query: 194 NEYGQLGRGITCEGLQGPRVIKGY 217
GQLG G TC ++ P +KG+
Sbjct: 322 GTRGQLGTGHTCN-VKCPSPVKGH 344
Score = 172 (65.6 bits), Expect = 2.6e-09, P = 2.6e-09
Identities = 57/187 (30%), Positives = 87/187 (46%)
Query: 230 ITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVA 289
+ QV+ G HS A+S +G V+ WG S GQLG + D+E P V L + ++
Sbjct: 192 LAQVAAGGAHSFALSLSGAVFGWGKNSSGQLGLSDER--DRES-PCHVKLLRSQKVVYIS 248
Query: 290 CGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQL 349
CG H+ LT G ++ +G GQLG + + + P R + + ++ + V
Sbjct: 249 CGEEHTAVLTKSGGVFTFGAGSCGQLG--HDSMNDEVNP-------RRV-LELMGSEVSQ 298
Query: 350 VACGHSHTLVYM-RDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHS 408
+ACG HTL ++ G I+ +G + GQ + PSPV G AA G
Sbjct: 299 IACGRHHTLAFVPSSGMIYAFGCGTRGQLGTGHTCNVKCPSPVK---GH---WAAHNGQL 352
Query: 409 AVLADAC 415
+ DAC
Sbjct: 353 SGKPDAC 359
>MGI|MGI:1914595 [details] [associations]
symbol:Herc4 "hect domain and RLD 4" species:10090 "Mus
musculus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IBA;TAS] [GO:0005622 "intracellular" evidence=IEA]
[GO:0005634 "nucleus" evidence=IBA] [GO:0005737 "cytoplasm"
evidence=IBA] [GO:0006464 "cellular protein modification process"
evidence=IEA] [GO:0007283 "spermatogenesis" evidence=IMP]
[GO:0016567 "protein ubiquitination" evidence=TAS] [GO:0016874
"ligase activity" evidence=IEA] [GO:0030154 "cell differentiation"
evidence=IEA] [GO:0042787 "protein ubiquitination involved in
ubiquitin-dependent protein catabolic process" evidence=IBA]
Pfam:PF00632 InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119
UniPathway:UPA00143 MGI:MGI:1914595 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005829 GO:GO:0005634 GO:GO:0005737 GO:GO:0030154
GO:GO:0007283 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626
PROSITE:PS50012 GO:GO:0042787 SUPFAM:SSF56204 eggNOG:COG5021
GeneTree:ENSGT00660000095216 HOVERGEN:HBG050878 HSSP:Q9UEP9
CTD:26091 KO:K10615 EMBL:AK009436 EMBL:AK143111 EMBL:AK145735
EMBL:AK147723 EMBL:BC026855 EMBL:BC043082 EMBL:BC047157
EMBL:BC060033 IPI:IPI00453903 IPI:IPI00554980 IPI:IPI00828240
RefSeq:NP_080377.2 RefSeq:NP_084390.1 UniGene:Mm.234437
UniGene:Mm.422789 UniGene:Mm.441725 UniGene:Mm.487274
ProteinModelPortal:Q6PAV2 SMR:Q6PAV2 STRING:Q6PAV2
PhosphoSite:Q6PAV2 PaxDb:Q6PAV2 PRIDE:Q6PAV2
Ensembl:ENSMUST00000020258 GeneID:67345 KEGG:mmu:67345
UCSC:uc007fka.2 UCSC:uc007fkc.2 UCSC:uc007fkd.2 InParanoid:Q6PAV2
OMA:KLVIQPT OrthoDB:EOG44XJG1 NextBio:324318 Bgee:Q6PAV2
CleanEx:MM_HERC4 Genevestigator:Q6PAV2 Uniprot:Q6PAV2
Length = 1057
Score = 362 (132.5 bits), Expect = 5.5e-32, P = 5.5e-32
Identities = 102/333 (30%), Positives = 157/333 (47%)
Query: 83 LFTWGANEFGQLGDG--TEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIS 140
+ WG +GQLG G EE P + ++ V+ + CG T + + DGT+
Sbjct: 1 MLCWGNASYGQLGLGGIDEEIVLEPRRSDFFVNKKVRDVGCGLRHTVFVLD----DGTVY 56
Query: 141 T---SRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYG 197
T + L G + P N I V+CG H +AL++ G + AWG + G
Sbjct: 57 TCGCNDLGQLGHEKSRKKPEQVVALDAQN--IVAVACGEAHTLALNDKGQVYAWGLDSDG 114
Query: 198 QLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSV 257
QLG + E ++ PR IK + +I QV+CG YHS A+S+ EV+ WG
Sbjct: 115 QLGLQGSEECIRVPRNIKSLSDI--------QIVQVACGYYHSLALSKASEVFCWGQNKY 166
Query: 258 GQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGL 317
GQLG + K+ P+ + +L GI VA GG HS LT GA++ WG ++ GQLGL
Sbjct: 167 GQLG-LGIDC-QKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGL 224
Query: 318 GPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQA 377
+E+D Y N+ + + + CG HT ++G + +G YGQ
Sbjct: 225 N----------DENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQL 274
Query: 378 ANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSA 409
+ +++ P V +G V ++A G H++
Sbjct: 275 GHNSTSHEINPRKVFELMGSIVTQVACGRQHTS 307
Score = 354 (129.7 bits), Expect = 3.9e-31, P = 3.9e-31
Identities = 95/294 (32%), Positives = 147/294 (50%)
Query: 26 WGYNHSGQTGRKGRERQLRI-PKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGTLF 84
WG GQ G G + ++ + P++ + F N + D+ CG HT V DGT++
Sbjct: 4 WGNASYGQLGLGGIDEEIVLEPRR--SDFF-----VNKKVRDVGCGLRHTVFVLDDGTVY 56
Query: 85 TWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND--GTISTS 142
T G N+ GQLG E+ RK PE+V L ++ + +++CG T A+ + + G S
Sbjct: 57 TCGCNDLGQLGH--EKSRKKPEQVVALDAQNIVAVACGEAHTLALNDKGQVYAWGLDSDG 114
Query: 143 RLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRG 202
+L + G + PR + I QV+CG H +ALS+ + WG N+YGQLG G
Sbjct: 115 QLGLQGSEECIRVPRNIKSL--SDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG 172
Query: 203 ITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGH 262
I C+ P++IK L P + QV+ G HS ++ +G ++ WG GQLG
Sbjct: 173 IDCQKQTSPQLIKS----LLGIPFM----QVAAGGAHSFVLTLSGAIFGWGRNKFGQLG- 223
Query: 263 CSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLG 316
L + +P + +L I + CG H+ ALT +G ++ +G GQLG
Sbjct: 224 --LNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG 275
Score = 323 (118.8 bits), Expect = 3.2e-26, P = 3.2e-26
Identities = 84/256 (32%), Positives = 125/256 (48%)
Query: 67 IACGHEHTAAVASDGTLFTWGANEFGQLG-DGTEEGRKHPEKVKQLQSEFVKSISCGAHC 125
+ACG HT A+ G ++ WG + GQLG G+EE + P +K L + ++CG +
Sbjct: 89 VACGEAHTLALNDKGQVYAWGLDSDGQLGLQGSEECIRVPRNIKSLSDIQIVQVACGYYH 148
Query: 126 TAAIAEPREND--GTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALS 183
+ A+++ E G +L + Q P+L QV+ G H L+
Sbjct: 149 SLALSKASEVFCWGQNKYGQLGLGIDCQKQTSPQLIKSLL--GIPFMQVAAGGAHSFVLT 206
Query: 184 ECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAV 243
G + WG N++GQLG + R + K L +KI + CGE H+AA+
Sbjct: 207 LSGAIFGWGRNKFGQLGLND-----ENDRYVPNLLKSLRS----QKIVYICCGEDHTAAL 257
Query: 244 SENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALT-SKG 302
++ G V+T+G G GQLGH S E+ PR+V L G + VACG H+ A S G
Sbjct: 258 TKEGGVFTFGAGGYGQLGH---NSTSHEINPRKVFELMGSIVTQVACGRQHTSAFVPSSG 314
Query: 303 ALYAWGGSQAGQLGLG 318
+Y++G GQLG G
Sbjct: 315 RIYSFGLGGNGQLGTG 330
Score = 270 (100.1 bits), Expect = 4.2e-20, P = 4.2e-20
Identities = 85/227 (37%), Positives = 108/227 (47%)
Query: 191 WGYNEYGQLGRG-ITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEV 249
WG YGQLG G I E + PR + +K+ V CG H+ V ++G V
Sbjct: 4 WGNASYGQLGLGGIDEEIVLEPRRSDFFVN--------KKVRDVGCGLRHTVFVLDDGTV 55
Query: 250 YTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGG 309
YT G +GQLGH + K+ P +VVALD I VACG H+ AL KG +YAWG
Sbjct: 56 YTCGCNDLGQLGH---EKSRKK--PEQVVALDAQNIVAVACGEAHTLALNDKGQVYAWGL 110
Query: 310 SQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGW 369
GQLGL +P RNI L VQ VACG+ H+L + + W
Sbjct: 111 DSDGQLGLQGSEECIR-VP-------RNIKSLSDIQIVQ-VACGYYHSLALSKASEVFCW 161
Query: 370 GYNSYGQAAN----EKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVL 411
G N YGQ +K T P + +G ++AAGG HS VL
Sbjct: 162 GQNKYGQLGLGIDCQKQTS---PQLIKSLLGIPFMQVAAGGAHSFVL 205
Score = 254 (94.5 bits), Expect = 2.5e-18, P = 2.5e-18
Identities = 76/256 (29%), Positives = 127/256 (49%)
Query: 20 KSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVAS 79
K +Y WG + GQ G +G E +R+P+ + L ++ + + +ACG+ H+ A++
Sbjct: 102 KGQVYAWGLDSDGQLGLQGSEECIRVPRNIK-SL------SDIQIVQVACGYYHSLALSK 154
Query: 80 DGTLFTWGANEFGQLGDGTE-EGRKHPEKVKQLQS-EFVKSISCGAHCTAAIAEPRENDG 137
+F WG N++GQLG G + + + P+ +K L F++ + GAH
Sbjct: 155 ASEVFCWGQNKYGQLGLGIDCQKQTSPQLIKSLLGIPFMQVAAGGAHSFVL--------- 205
Query: 138 TISTSRLWVWGQNQ----GSNFPRLFWGAFTPNTI-------ICQVSCGSVHVVALSECG 186
T+S + ++ WG+N+ G N + PN + I + CG H AL++ G
Sbjct: 206 TLSGA-IFGWGRNKFGQLGLNDEN---DRYVPNLLKSLRSQKIVYICCGEDHTAALTKEG 261
Query: 187 LLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAA-VSE 245
+ +G YGQLG T + PR K + + +TQV+CG H++A V
Sbjct: 262 GVFTFGAGGYGQLGHNSTSHEIN-PR------KVFELMGSI--VTQVACGRQHTSAFVPS 312
Query: 246 NGEVYTWGLGSVGQLG 261
+G +Y++GLG GQLG
Sbjct: 313 SGRIYSFGLGGNGQLG 328
Score = 217 (81.4 bits), Expect = 3.1e-14, P = 3.1e-14
Identities = 66/213 (30%), Positives = 101/213 (47%)
Query: 21 SAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASD 80
S ++ WG N GQ G G + Q + QL L G P ++ +A G H+ +
Sbjct: 156 SEVFCWGQNKYGQLGL-GIDCQKQTSPQLIKSLLGIP------FMQVAAGGAHSFVLTLS 208
Query: 81 GTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIS 140
G +F WG N+FGQLG E R P +K L+S+ + I CG TAA+ + +G +
Sbjct: 209 GAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTK----EGGVF 264
Query: 141 TSRLWVWGQ---NQGSNF--PRLFWGAFTPNTIICQVSCGSVHVVA-LSECGLLQAWGYN 194
T +GQ N S+ PR + +I+ QV+CG H A + G + ++G
Sbjct: 265 TFGAGGYGQLGHNSTSHEINPRKVFELM--GSIVTQVACGRQHTSAFVPSSGRIYSFGLG 322
Query: 195 EYGQLGRGITCEGLQGPRVIKG-YAKFLDEAPE 226
GQLG G T + P +KG + + + P+
Sbjct: 323 GNGQLGTGST-SNRKSPFTVKGNWFSYNGQCPQ 354
Score = 157 (60.3 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 47/159 (29%), Positives = 73/159 (45%)
Query: 232 QVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACG 291
QV+ G HS ++ +G ++ WG GQLG L + +P + +L I + CG
Sbjct: 194 QVAAGGAHSFVLTLSGAIFGWGRNKFGQLG---LNDENDRYVPNLLKSLRSQKIVYICCG 250
Query: 292 GVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVA 351
H+ ALT +G ++ +G GQLG + S + P + +I V VA
Sbjct: 251 EDHTAALTKEGGVFTFGAGGYGQLG--HNSTSHEINPRKVFELMGSI--------VTQVA 300
Query: 352 CGHSHTLVYM-RDGRIHGWGYNSYGQ-----AANEKSTY 384
CG HT ++ GRI+ +G GQ +N KS +
Sbjct: 301 CGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPF 339
>UNIPROTKB|E1BAV2 [details] [associations]
symbol:HERC4 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0007283 "spermatogenesis" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] Pfam:PF00632 InterPro:IPR000569
PROSITE:PS50237 SMART:SM00119 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0007283 GO:GO:0016567 GO:GO:0005622 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 SUPFAM:SSF56204
GeneTree:ENSGT00660000095216 CTD:26091 KO:K10615 OMA:KLVIQPT
EMBL:DAAA02061808 EMBL:DAAA02061809 EMBL:DAAA02061810
IPI:IPI00839181 RefSeq:NP_001070362.2 UniGene:Bt.15687
Ensembl:ENSBTAT00000018639 GeneID:533336 KEGG:bta:533336
NextBio:20876005 ArrayExpress:E1BAV2 Uniprot:E1BAV2
Length = 1057
Score = 360 (131.8 bits), Expect = 8.9e-32, P = 8.9e-32
Identities = 116/397 (29%), Positives = 183/397 (46%)
Query: 26 WGYNHSGQTGRKGRERQLRI-PKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGTLF 84
WG GQ G G + ++ + P++ + F N + D+ CG HT V DGT++
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRK--SDFF-----INKKVRDVGCGLRHTVFVLDDGTVY 56
Query: 85 TWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND--GTISTS 142
T G N+ GQLG E+ RK PE+V L ++ + ++SCG T A+ + + G S
Sbjct: 57 TCGCNDLGQLGH--EKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDG 114
Query: 143 RLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRG 202
+L + G + PR + I QV+CG H +ALS+ + WG N+YGQLG G
Sbjct: 115 QLGLLGSEECIRVPRNIKSL--SDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG 172
Query: 203 ITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGH 262
I C+ P++IK L P + Q++ G HS ++ +G ++ WG GQLG
Sbjct: 173 IDCKKQASPQLIKS----LLGIPFM----QIAAGGAHSFVLTLSGAIFGWGRNKFGQLG- 223
Query: 263 CSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTR 322
L + +P + +L I + CG H+ ALT +G ++ +G GQLG +
Sbjct: 224 --LNDENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG--HNST 279
Query: 323 SFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKS 382
S + P + +I + A S +Y + G G G +N KS
Sbjct: 280 SHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFG--LGGNGQLGTGSTSNRKS 337
Query: 383 TYA----WYP----SPVDWCVGE---VRKLAAGGGHS 408
+ W+P P D+ E V+++ +GG S
Sbjct: 338 PFTVKGNWFPYNGQCPPDFDSEEYFCVKRIFSGGDQS 374
Score = 310 (114.2 bits), Expect = 1.1e-24, P = 1.1e-24
Identities = 86/252 (34%), Positives = 123/252 (48%)
Query: 83 LFTWGANEFGQLGDG--TEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIS 140
+ WG FGQLG G EE P K ++ V+ + CG T + + DGT+
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLD----DGTVY 56
Query: 141 T---SRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYG 197
T + L G + P N I VSCG H +AL++ G + AWG + G
Sbjct: 57 TCGCNDLGQLGHEKSRKKPEQVVALDAQN--IVAVSCGEAHTLALNDKGQVYAWGLDSDG 114
Query: 198 QLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSV 257
QLG + E ++ PR IK + +I QV+CG YHS A+S+ EV+ WG
Sbjct: 115 QLGLLGSEECIRVPRNIKSLSDI--------QIVQVACGYYHSLALSKASEVFCWGQNKY 166
Query: 258 GQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGL 317
GQLG + K+ P+ + +L GI +A GG HS LT GA++ WG ++ GQLGL
Sbjct: 167 GQLG-LGIDC-KKQASPQLIKSLLGIPFMQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGL 224
Query: 318 GPQTRSFSLIPN 329
+ + +PN
Sbjct: 225 NDENDRY--VPN 234
Score = 250 (93.1 bits), Expect = 7.1e-18, P = 7.1e-18
Identities = 73/247 (29%), Positives = 121/247 (48%)
Query: 20 KSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVAS 79
K +Y WG + GQ G G E +R+P+ + L ++ + + +ACG+ H+ A++
Sbjct: 102 KGQVYAWGLDSDGQLGLLGSEECIRVPRNIK-SL------SDIQIVQVACGYYHSLALSK 154
Query: 80 DGTLFTWGANEFGQLGDGTE-EGRKHPEKVKQLQS-EFVKSISCGAHC-TAAIAEPREND 136
+F WG N++GQLG G + + + P+ +K L F++ + GAH ++
Sbjct: 155 ASEVFCWGQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQIAAGGAHSFVLTLSGAIFGW 214
Query: 137 GTISTSRLWVWGQNQGSNFPRLFWGAFTPNTI-ICQVSCGSVHVVALSECGLLQAWGYNE 195
G +L + +N P L T + IC CG H AL++ G + +G
Sbjct: 215 GRNKFGQLGLNDEND-RYVPNLLKSLRTQKIVYIC---CGEDHTAALTKEGGVFTFGAGG 270
Query: 196 YGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAA-VSENGEVYTWGL 254
YGQLG T + PR K + + +TQ++CG H++A V +G +Y++GL
Sbjct: 271 YGQLGHNSTSHEIN-PR------KVFELMGSI--VTQIACGRQHTSAFVPSSGRIYSFGL 321
Query: 255 GSVGQLG 261
G GQLG
Sbjct: 322 GGNGQLG 328
Score = 248 (92.4 bits), Expect = 1.2e-17, P = 1.2e-17
Identities = 70/186 (37%), Positives = 91/186 (48%)
Query: 228 EKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKD 287
+K+ V CG H+ V ++G VYT G +GQLGH + K+ P +VVALD I
Sbjct: 34 KKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGH---EKSRKK--PEQVVALDAQNIVA 88
Query: 288 VACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGV 347
V+CG H+ AL KG +YAWG GQLGL +P RNI L V
Sbjct: 89 VSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIR-VP-------RNIKSLSDIQIV 140
Query: 348 QLVACGHSHTLVYMRDGRIHGWGYNSYGQAA-NEKSTYAWYPSPVDWCVG-EVRKLAAGG 405
Q VACG+ H+L + + WG N YGQ P + +G ++AAGG
Sbjct: 141 Q-VACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQIAAGG 199
Query: 406 GHSAVL 411
HS VL
Sbjct: 200 AHSFVL 205
Score = 209 (78.6 bits), Expect = 2.4e-13, P = 2.4e-13
Identities = 63/202 (31%), Positives = 96/202 (47%)
Query: 21 SAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASD 80
S ++ WG N GQ G G + + + QL L G P ++ IA G H+ +
Sbjct: 156 SEVFCWGQNKYGQLGL-GIDCKKQASPQLIKSLLGIP------FMQIAAGGAHSFVLTLS 208
Query: 81 GTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIS 140
G +F WG N+FGQLG E R P +K L+++ + I CG TAA+ + +G +
Sbjct: 209 GAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRTQKIVYICCGEDHTAALTK----EGGVF 264
Query: 141 TSRLWVWGQ---NQGSNF--PRLFWGAFTPNTIICQVSCGSVHVVA-LSECGLLQAWGYN 194
T +GQ N S+ PR + +I+ Q++CG H A + G + ++G
Sbjct: 265 TFGAGGYGQLGHNSTSHEINPRKVFELM--GSIVTQIACGRQHTSAFVPSSGRIYSFGLG 322
Query: 195 EYGQLGRGITCEGLQGPRVIKG 216
GQLG G T + P +KG
Sbjct: 323 GNGQLGTGST-SNRKSPFTVKG 343
>FB|FBgn0035207 [details] [associations]
symbol:CG9153 species:7227 "Drosophila melanogaster"
[GO:0004842 "ubiquitin-protein ligase activity" evidence=ISS;IBA]
[GO:0042787 "protein ubiquitination involved in ubiquitin-dependent
protein catabolic process" evidence=IBA] [GO:0005737 "cytoplasm"
evidence=IBA] [GO:0005634 "nucleus" evidence=IBA] Pfam:PF00632
InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119 INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005634 GO:GO:0005737 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 GO:GO:0042787 SUPFAM:SSF56204
eggNOG:COG5021 HSSP:Q05086 EMBL:AY128479 ProteinModelPortal:Q8MQN4
SMR:Q8MQN4 PaxDb:Q8MQN4 PRIDE:Q8MQN4 FlyBase:FBgn0035207
InParanoid:Q8MQN4 OrthoDB:EOG4WDBSR ChiTaRS:CG9153
ArrayExpress:Q8MQN4 Bgee:Q8MQN4 Uniprot:Q8MQN4
Length = 1058
Score = 360 (131.8 bits), Expect = 9.0e-32, P = 9.0e-32
Identities = 110/369 (29%), Positives = 171/369 (46%)
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRK--HPEKVKQLQSEFVKSISCGAHCTAAIAEPRE 134
+AS L+ WG+ GQLG G E + P ++ V+ ++CG T +
Sbjct: 1 MASGKELYCWGSTSHGQLGLGGIEDEQILTPSQIPWTPDTAVQQVACGHRHTLFLT---- 56
Query: 135 NDGTISTSRLWVWGQNQ----GSNFP--RLFWGAFTPNTIICQVSCGSVHVVALSECGLL 188
+T +++ G N G + P R + +I Q+ CGS H +ALS+ G +
Sbjct: 57 -----ATGKVYACGSNDYSQLGHDLPTKRPLLIPELQDYVIIQICCGSRHSLALSDWGQV 111
Query: 189 QAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGE 248
+WG N+ GQLG E +Q P+V++ + + Q++CG HS A++ GE
Sbjct: 112 LSWGDNDCGQLGHATDKEIVQLPKVVRQLVT--------KTVVQIACGNNHSLALTSCGE 163
Query: 249 VYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWG 308
+Y+WG GQLG S P R+ L GI + +ACGG HS ++ GA++ WG
Sbjct: 164 LYSWGSNIYGQLGVNSPNDLTHCNYPLRLTTLLGIPLAAIACGGNHSFLISKSGAVFGWG 223
Query: 309 GSQAGQLGLGPQT-RSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIH 367
+ GQLGL +T RS+ P + T R + GV+ VACG ++ +G +
Sbjct: 224 RNNCGQLGLNDETNRSY---PTQLKT-LRTL-------GVRFVACGDEFSVFLTNEGGVF 272
Query: 368 GWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLADACSLKELCEFRLA 426
G +YGQ + S+ P V +G + ++A G H+ L S + F L
Sbjct: 273 TCGAGAYGQLGHGFSSNEMLPRMVMELMGSTITQVACGNRHTLALVP--SRGRVYAFGLG 330
Query: 427 ESVTLSNAS 435
S L S
Sbjct: 331 SSGQLGTRS 339
Score = 313 (115.2 bits), Expect = 4.9e-25, P = 4.9e-25
Identities = 89/301 (29%), Positives = 143/301 (47%)
Query: 23 IYVWGYNHSGQTGRKGRE-RQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDG 81
+Y WG GQ G G E Q+ P Q+P P A + +ACGH HT + + G
Sbjct: 7 LYCWGSTSHGQLGLGGIEDEQILTPSQIP----WTPDTAVQQ---VACGHRHTLFLTATG 59
Query: 82 TLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRE--NDGTI 139
++ G+N++ QLG K P + +LQ + I CG+ + A+++ + + G
Sbjct: 60 KVYACGSNDYSQLGHDLPT--KRPLLIPELQDYVIIQICCGSRHSLALSDWGQVLSWGDN 117
Query: 140 STSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQL 199
+L + P++ T T++ Q++CG+ H +AL+ CG L +WG N YGQL
Sbjct: 118 DCGQLGHATDKEIVQLPKVVRQLVT-KTVV-QIACGNNHSLALTSCGELYSWGSNIYGQL 175
Query: 200 GRGITCEGLQGPRVIK--GYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSV 257
G + P + Y L + + ++CG HS +S++G V+ WG +
Sbjct: 176 G-------VNSPNDLTHCNYPLRLTTLLGIP-LAAIACGGNHSFLISKSGAVFGWGRNNC 227
Query: 258 GQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGL 317
GQLG L P ++ L + ++ VACG S LT++G ++ G GQLG
Sbjct: 228 GQLG---LNDETNRSYPTQLKTLRTLGVRFVACGDEFSVFLTNEGGVFTCGAGAYGQLGH 284
Query: 318 G 318
G
Sbjct: 285 G 285
Score = 297 (109.6 bits), Expect = 3.6e-23, P = 3.6e-23
Identities = 91/269 (33%), Positives = 135/269 (50%)
Query: 65 LDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTE-EGRKHPEKVKQLQSEFVKSISCGA 123
+ I CG H+ A++ G + +WG N+ GQLG T+ E + P+ V+QL ++ V I+CG
Sbjct: 93 IQICCGSRHSLALSDWGQVLSWGDNDCGQLGHATDKEIVQLPKVVRQLVTKTVVQIACGN 152
Query: 124 HCTAAIAEPRE--NDGTISTSRLWVWGQNQGS--NFP-RLFWGAFTPNTIICQVSCGSVH 178
+ + A+ E + G+ +L V N + N+P RL P + ++CG H
Sbjct: 153 NHSLALTSCGELYSWGSNIYGQLGVNSPNDLTHCNYPLRLTTLLGIP---LAAIACGGNH 209
Query: 179 VVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEY 238
+S+ G + WG N GQLG + Y L L + V+CG+
Sbjct: 210 SFLISKSGAVFGWGRNNCGQLGLN--------DETNRSYPTQLKTLRTLG-VRFVACGDE 260
Query: 239 HSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCAL 298
S ++ G V+T G G+ GQLGH S E+LPR V+ L G I VACG H+ AL
Sbjct: 261 FSVFLTNEGGVFTCGAGAYGQLGH-GFSSN--EMLPRMVMELMGSTITQVACGNRHTLAL 317
Query: 299 T-SKGALYAWGGSQAGQLGLGPQTRSFSL 326
S+G +YA+G +GQLG T+S L
Sbjct: 318 VPSRGRVYAFGLGSSGQLGTR-STKSLML 345
Score = 221 (82.9 bits), Expect = 1.1e-14, P = 1.1e-14
Identities = 79/260 (30%), Positives = 124/260 (47%)
Query: 26 WGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGTLFT 85
WG N GQ G + +++PK + +L + IACG+ H+ A+ S G L++
Sbjct: 114 WGDNDCGQLGHATDKEIVQLPKVVR-QL------VTKTVVQIACGNNHSLALTSCGELYS 166
Query: 86 WGANEFGQLGDGTEEGRKH---PEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
WG+N +GQLG + H P ++ L + +I+CG + + I++ G +
Sbjct: 167 WGSNIYGQLGVNSPNDLTHCNYPLRLTTLLGIPLAAIACGGNHSFLISKSGAVFGW-GRN 225
Query: 143 RLWVWGQNQGSN--FPRLFWGAFTPNTI-ICQVSCGSVHVVALSECGLLQAWGYNEYGQL 199
G N +N +P T T+ + V+CG V L+ G + G YGQL
Sbjct: 226 NCGQLGLNDETNRSYPTQLK---TLRTLGVRFVACGDEFSVFLTNEGGVFTCGAGAYGQL 282
Query: 200 GRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAA-VSENGEVYTWGLGSVG 258
G G + + PR++ + + ITQV+CG H+ A V G VY +GLGS G
Sbjct: 283 GHGFSSNEML-PRMVM---ELMGST-----ITQVACGNRHTLALVPSRGRVYAFGLGSSG 333
Query: 259 QLGHCSLQSGDKELLPRRVV 278
QLG S +S +LP+ V+
Sbjct: 334 QLGTRSTKS---LMLPQVVI 350
Score = 206 (77.6 bits), Expect = 5.0e-13, P = 5.0e-13
Identities = 65/202 (32%), Positives = 94/202 (46%)
Query: 23 IYVWGYNHSGQTGRKGRE--RQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASD 80
+Y WG N GQ G P +L L G P A IACG H+ ++
Sbjct: 164 LYSWGSNIYGQLGVNSPNDLTHCNYPLRLTT-LLGIPLAA------IACGGNHSFLISKS 216
Query: 81 GTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIS 140
G +F WG N GQLG E R +P ++K L++ V+ ++CG + + N+G +
Sbjct: 217 GAVFGWGRNNCGQLGLNDETNRSYPTQLKTLRTLGVRFVACGDEFSVFLT----NEGGVF 272
Query: 141 TSRLWVWGQ-NQG--SN--FPRLFWGAFTPNTIICQVSCGSVHVVALSEC-GLLQAWGYN 194
T +GQ G SN PR+ + I QV+CG+ H +AL G + A+G
Sbjct: 273 TCGAGAYGQLGHGFSSNEMLPRMVMELM--GSTITQVACGNRHTLALVPSRGRVYAFGLG 330
Query: 195 EYGQLGRGITCEGLQGPRVIKG 216
GQLG T + L P+V+ G
Sbjct: 331 SSGQLGTRST-KSLMLPQVVIG 351
Score = 178 (67.7 bits), Expect = 5.8e-10, P = 5.8e-10
Identities = 48/163 (29%), Positives = 78/163 (47%)
Query: 230 ITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVA 289
+ ++CG HS +S++G V+ WG + GQLG L P ++ L + ++ VA
Sbjct: 200 LAAIACGGNHSFLISKSGAVFGWGRNNCGQLG---LNDETNRSYPTQLKTLRTLGVRFVA 256
Query: 290 CGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQL 349
CG S LT++G ++ G GQLG G FS S+ + + ++ + +
Sbjct: 257 CGDEFSVFLTNEGGVFTCGAGAYGQLGHG-----FS-----SNEMLPRMVMELMGSTITQ 306
Query: 350 VACGHSHTLVYMRD-GRIHGWGYNSYGQAANEKSTYAWYPSPV 391
VACG+ HTL + GR++ +G S GQ + P V
Sbjct: 307 VACGNRHTLALVPSRGRVYAFGLGSSGQLGTRSTKSLMLPQVV 349
Score = 134 (52.2 bits), Expect = 3.6e-05, P = 3.6e-05
Identities = 36/118 (30%), Positives = 52/118 (44%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPP-ELFGCPAGANSRWLDIACGHEHTA 75
I A++ WG N+ GQ G E P QL G R+ +ACG E +
Sbjct: 213 ISKSGAVFGWGRNNCGQLGLND-ETNRSYPTQLKTLRTLGV------RF--VACGDEFSV 263
Query: 76 AVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPR 133
+ ++G +FT GA +GQLG G P V +L + ++CG T A+ R
Sbjct: 264 FLTNEGGVFTCGAGAYGQLGHGFSSNEMLPRMVMELMGSTITQVACGNRHTLALVPSR 321
>ZFIN|ZDB-GENE-070718-6 [details] [associations]
symbol:herc2 "hect domain and RLD 2" species:7955
"Danio rerio" [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] [GO:0006464 "cellular protein modification
process" evidence=IEA] [GO:0020037 "heme binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] Pfam:PF00632
InterPro:IPR000433 InterPro:IPR000569 InterPro:IPR001199
InterPro:IPR009060 InterPro:IPR010606 Pfam:PF00173 Pfam:PF00569
Pfam:PF06701 PROSITE:PS01357 PROSITE:PS50135 PROSITE:PS50237
PROSITE:PS50255 PROSITE:PS51416 SMART:SM00119 SMART:SM00291
INTERPRO:IPR000408 Pfam:PF00415 ZFIN:ZDB-GENE-070718-6
GO:GO:0046872 GO:GO:0008270 GO:GO:0020037 GO:GO:0005622
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
Gene3D:3.10.120.10 SUPFAM:SSF55856 InterPro:IPR008979
SUPFAM:SSF49785 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 InterPro:IPR004939 Pfam:PF03256 PROSITE:PS51284
SUPFAM:SSF46934 Gene3D:2.30.30.30 InterPro:IPR021097
InterPro:IPR014722 Pfam:PF11515 SUPFAM:SSF56204
GeneTree:ENSGT00700000104208 InterPro:IPR006624 SMART:SM00706
EMBL:CABZ01006344 EMBL:CABZ01006345 EMBL:CABZ01006346 EMBL:FP085470
IPI:IPI00495163 Ensembl:ENSDART00000110770 Uniprot:E7EYK8
Length = 4832
Score = 308 (113.5 bits), Expect = 1.2e-21, Sum P(3) = 1.2e-21
Identities = 88/282 (31%), Positives = 134/282 (47%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ WG G G+ G ++ K P L A R DIACG H+AA+ S G
Sbjct: 3064 VFSWG---EGDDGKLGHFSRMNCDK---PRLI--EALKTKRIRDIACGSSHSAAITSSGE 3115
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND----GT 138
L++WG E+G+LG G + P+ VK L V ++CG+ +A E G
Sbjct: 3116 LYSWGLGEYGRLGHGDNTTQLRPKLVKVLLGHRVVQVACGSRDAQTLALTDEGMVFSWGD 3175
Query: 139 ISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQ 198
+L G ++G N P+ +CQ+ CG+ +AL++ G++ WG +Y +
Sbjct: 3176 GDFGKLGRGG-SEGCNIPQNIERLNGQG--VCQIECGAQFSLALTKSGVVWTWGKGDYFR 3232
Query: 199 LGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVG 258
LG G T ++ P++++G +KI V+ G H AV+E G+V+ WG G
Sbjct: 3233 LGHG-TDVHVRKPQMVEGLRG--------KKIVHVAVGALHCLAVTETGQVFAWGDNDHG 3283
Query: 259 QLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTS 300
Q G+ + K P V L+G I VACG HS A T+
Sbjct: 3284 QQGNGTTTVNRK---PTLVQGLEGQKITRVACGSSHSVAWTT 3322
Score = 302 (111.4 bits), Expect = 2.3e-21, Sum P(2) = 2.3e-21
Identities = 89/294 (30%), Positives = 137/294 (46%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
+ ++ +Y WG G+ G R R P+ + L G +DIA G H+A
Sbjct: 4052 LSSEGELYSWGEAEDGKLGHGNRSPCDR-PRVIE-SLRGVEV------VDIAAGGAHSAC 4103
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND 136
+ + G L+TWG +G+LG G E + P+ V+ LQ V ++CG+ + ++D
Sbjct: 4104 ITASGELYTWGKGRYGRLGHGDSEDQLKPKLVEALQGHRVIDVACGSGDAQTLCLT-DDD 4162
Query: 137 GTISTSRLWVWGQNQGSNFPRLFW-GAFTPNTI-------ICQVSCGSVHVVALSECGLL 188
+W WG R G P I + +V CGS VAL++ G +
Sbjct: 4163 ------MVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAV 4216
Query: 189 QAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGE 248
WG +Y +LG G + + ++ PR ++G + +K+ ++ G H +E+GE
Sbjct: 4217 YTWGKGDYHRLGHG-SDDHVRRPRQVQGL--------QGKKVIAIATGSLHCVCCTEDGE 4267
Query: 249 VYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCAL-TSK 301
VYTWG GQLG + + + PR V AL G I VACG H+ A TSK
Sbjct: 4268 VYTWGDNDEGQLGDGTTNAIQR---PRLVAALQGKKINRVACGSAHTLAWSTSK 4318
Score = 302 (111.4 bits), Expect = 2.3e-21, Sum P(2) = 2.3e-21
Identities = 93/306 (30%), Positives = 140/306 (45%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
+ A +Y GY G+ G G E P L R + + G +H A
Sbjct: 3998 VTADGKLYATGYGAGGRLGIGGTE------SVSTPTLLESIQHVFIRKVAVNSGGKHCLA 4051
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRE-- 134
++S+G L++WG E G+LG G P ++ L+ V I+ G +A I E
Sbjct: 4052 LSSEGELYSWGEAEDGKLGHGNRSPCDRPRVIESLRGVEVVDIAAGGAHSACITASGELY 4111
Query: 135 NDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGS--VHVVALSECGLLQAWG 192
G RL G ++ P+L A + +I V+CGS + L++ ++ +WG
Sbjct: 4112 TWGKGRYGRLG-HGDSEDQLKPKLV-EALQGHRVI-DVACGSGDAQTLCLTDDDMVWSWG 4168
Query: 193 YNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTW 252
+YG+LGRG + +G + P I D L + +V CG S A++++G VYTW
Sbjct: 4169 DGDYGKLGRGGS-DGCKVPMKI-------DSLTGLG-VVKVECGSQFSVALTKSGAVYTW 4219
Query: 253 GLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQA 312
G G +LGH S D PR+V L G + +A G +H T G +Y WG +
Sbjct: 4220 GKGDYHRLGH---GSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDE 4276
Query: 313 GQLGLG 318
GQLG G
Sbjct: 4277 GQLGDG 4282
Score = 299 (110.3 bits), Expect = 1.7e-20, Sum P(3) = 1.7e-20
Identities = 90/309 (29%), Positives = 151/309 (48%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
+ A+ +Y G +G+ G + IP+Q+ + + + + G H A
Sbjct: 3003 VTAEGKVYACGEATNGRLGLGLSSGTIPIPRQI-----SALSNYVVKKVAVHSGGRHAMA 3057
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRE-- 134
+ DG +F+WG + G+LG + P ++ L+++ ++ I+CG+ +AAI E
Sbjct: 3058 LTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGELY 3117
Query: 135 NDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGS--VHVVALSECGLLQAWG 192
+ G RL G N P+L + ++ QV+CGS +AL++ G++ +WG
Sbjct: 3118 SWGLGEYGRLG-HGDNTTQLRPKLV-KVLLGHRVV-QVACGSRDAQTLALTDEGMVFSWG 3174
Query: 193 YNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTW 252
++G+LGRG + EG P+ I E + + Q+ CG S A++++G V+TW
Sbjct: 3175 DGDFGKLGRGGS-EGCNIPQNI--------ERLNGQGVCQIECGAQFSLALTKSGVVWTW 3225
Query: 253 GLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQA 312
G G +LGH + K P+ V L G I VA G +H A+T G ++AWG +
Sbjct: 3226 GKGDYFRLGHGTDVHVRK---PQMVEGLRGKKIVHVAVGALHCLAVTETGQVFAWGDNDH 3282
Query: 313 GQLGLGPQT 321
GQ G G T
Sbjct: 3283 GQQGNGTTT 3291
Score = 288 (106.4 bits), Expect = 1.1e-19, Sum P(2) = 1.1e-19
Identities = 88/303 (29%), Positives = 142/303 (46%)
Query: 23 IYVWGYNHSGQTGRKGRE-RQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDG 81
IY WG+NH GQ G G E ++++P P E A A R + + G + AV +DG
Sbjct: 3952 IYGWGHNHRGQLG--GIEGAKVKVPT--PTE-----ALATLRPVQLIGGEQTLFAVTADG 4002
Query: 82 TLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSI---SCGAHCTAAIAEPREND-G 137
L+ G G+LG G E P ++ +Q F++ + S G HC A +E G
Sbjct: 4003 KLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIRKVAVNSGGKHCLALSSEGELYSWG 4062
Query: 138 TISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYG 197
+L G + PR+ + ++ G H ++ G L WG YG
Sbjct: 4063 EAEDGKLG-HGNRSPCDRPRVIESL--RGVEVVDIAAGGAHSACITASGELYTWGKGRYG 4119
Query: 198 QLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCG--EYHSAAVSENGEVYTWGLG 255
+LG G + + L+ P+++ EA + ++ V+CG + + ++++ V++WG G
Sbjct: 4120 RLGHGDSEDQLK-PKLV--------EALQGHRVIDVACGSGDAQTLCLTDDDMVWSWGDG 4170
Query: 256 SVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQL 315
G+LG G K +P ++ +L G+ + V CG S ALT GA+Y WG +L
Sbjct: 4171 DYGKLGRGG-SDGCK--VPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRL 4227
Query: 316 GLG 318
G G
Sbjct: 4228 GHG 4230
Score = 272 (100.8 bits), Expect = 7.9e-18, Sum P(2) = 7.9e-18
Identities = 89/289 (30%), Positives = 144/289 (49%)
Query: 134 ENDGTISTSRLWVWGQNQ-----GSNFPRLFWGAF--TPNTI-ICQVSCGSVHVVALSEC 185
E+ TI T +++VWG N G ++ +F T + + + QV+ GS + A++
Sbjct: 2948 ESAATIRT-KVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTAE 3006
Query: 186 GLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSE 245
G + A G G+LG G++ + PR I + ++ ++K+ V G H+ A++
Sbjct: 3007 GKVYACGEATNGRLGLGLSSGTIPIPRQISALSNYV-----VKKVA-VHSGGRHAMALTV 3060
Query: 246 NGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALY 305
+G+V++WG G G+LGH S + DK PR + AL I+D+ACG HS A+TS G LY
Sbjct: 3061 DGKVFSWGEGDDGKLGHFSRMNCDK---PRLIEALKTKRIRDIACGSSHSAAITSSGELY 3117
Query: 306 AWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGH--SHTLVYMRD 363
+WG + G+LG G T L P + + +L+ VQ VACG + TL +
Sbjct: 3118 SWGLGEYGRLGHGDNTTQ--LRP-------KLVKVLLGHRVVQ-VACGSRDAQTLALTDE 3167
Query: 364 GRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVL 411
G + WG +G+ S P ++ G+ V ++ G S L
Sbjct: 3168 GMVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLAL 3216
Score = 271 (100.5 bits), Expect = 4.5e-17, Sum P(3) = 4.5e-17
Identities = 79/257 (30%), Positives = 135/257 (52%)
Query: 72 EHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQS----EFVKSISCGAHCTA 127
+H A++ +G +F+WG + G+LG G + P + + V I+CG+ +A
Sbjct: 495 QHYLALSVNGEVFSWGCGDGGRLGHGDTTYLEEPTMISVFSGRPVGKQVVHIACGSTYSA 554
Query: 128 AIAEPRENDGTISTSRLWVWGQNQGSNFPRLFWGAF----TPNTI-------ICQVSCGS 176
AI DG + T WG+ N+ RL G+ TP + + V+CGS
Sbjct: 555 AITA----DGELHT-----WGRG---NYGRLGHGSSEDQTTPMLVTALKGLKVIDVACGS 602
Query: 177 --VHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVS 234
+A++E G + +WG +YG+LGRG + +G + P++++ K D L+ I +V
Sbjct: 603 GDAQTLAVTENGQVWSWGDGDYGKLGRGGS-DGCKTPKLVE---KLQD----LD-IVKVC 653
Query: 235 CGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKEL-LPRRVVALDGIFIKDVACGGV 293
CG S A++++G+VYTWG G +LGH + D+ + P+ + +L G + D+A G
Sbjct: 654 CGSQFSVALTKDGQVYTWGKGDNQRLGHGT----DEHVRYPKLLDSLQGKRVVDIAVGST 709
Query: 294 HSCALTSKGALYAWGGS 310
H ALT +G +++WG +
Sbjct: 710 HCLALTEEGEVHSWGSN 726
Score = 266 (98.7 bits), Expect = 1.8e-16, Sum P(3) = 1.8e-16
Identities = 86/288 (29%), Positives = 137/288 (47%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELF-GCPAGANSRWLDIACGHEHTAAVASDG 81
++ WG G+ G G L P + +F G P G + + IACG ++AA+ +DG
Sbjct: 506 VFSWGCGDGGRLGH-GDTTYLEEPTMI--SVFSGRPVG--KQVVHIACGSTYSAAITADG 560
Query: 82 TLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIST 141
L TWG +G+LG G+ E + P V L+ V ++CG+ +A EN
Sbjct: 561 ELHTWGRGNYGRLGHGSSEDQTTPMLVTALKGLKVIDVACGSGDAQTLAVT-EN------ 613
Query: 142 SRLWVWGQNQGSNFPRLFW-GAFTPNTI-------ICQVSCGSVHVVALSECGLLQAWGY 193
++W WG R G TP + I +V CGS VAL++ G + WG
Sbjct: 614 GQVWSWGDGDYGKLGRGGSDGCKTPKLVEKLQDLDIVKVCCGSQFSVALTKDGQVYTWGK 673
Query: 194 NEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWG 253
+ +LG G T E ++ Y K LD + +++ ++ G H A++E GEV++WG
Sbjct: 674 GDNQRLGHG-TDEHVR-------YPKLLDSL-QGKRVVDIAVGSTHCLALTEEGEVHSWG 724
Query: 254 LGSVGQLGHC-SLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTS 300
S +L H +L S K+ P+ + L+ I ++CG S + +S
Sbjct: 725 --SNDKLQHFDTLFSNKKQ--PKALPGLNSKHIVGISCGPGQSFSWSS 768
Score = 264 (98.0 bits), Expect = 6.5e-17, Sum P(2) = 6.5e-17
Identities = 69/239 (28%), Positives = 120/239 (50%)
Query: 178 HVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGE 237
H +ALS G + +WG + G+LG G T L+ P +I ++ P +++ ++CG
Sbjct: 496 HYLALSVNGEVFSWGCGDGGRLGHGDTTY-LEEPTMISVFSG----RPVGKQVVHIACGS 550
Query: 238 YHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGG--VHS 295
+SAA++ +GE++TWG G+ G+LGH S + + P V AL G+ + DVACG +
Sbjct: 551 TYSAAITADGELHTWGRGNYGRLGH---GSSEDQTTPMLVTALKGLKVIDVACGSGDAQT 607
Query: 296 CALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHS 355
A+T G +++WG G+LG G + P + +++ I+ V CG
Sbjct: 608 LAVTENGQVWSWGDGDYGKLGRGGSDGCKT--PKLVEK-LQDLDIVKV-------CCGSQ 657
Query: 356 HTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLAD 413
++ +DG+++ WG + + + YP +D G+ V +A G H L +
Sbjct: 658 FSVALTKDGQVYTWGKGDNQRLGHGTDEHVRYPKLLDSLQGKRVVDIAVGSTHCLALTE 716
Score = 261 (96.9 bits), Expect = 6.8e-16, Sum P(3) = 6.8e-16
Identities = 84/307 (27%), Positives = 143/307 (46%)
Query: 20 KSAIYVWGYNHSGQTGR-KGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVA 78
++ ++VWG N Q G KG + +++P F A + + +A G + AV
Sbjct: 2954 RTKVFVWGLNDKDQLGGLKGSK--IKVPS------FSETLSALNV-VQVAGGSKSLFAVT 3004
Query: 79 SDGTLFTWGANEFGQLGDGTEEGR-KHPEKVKQLQSEFVKSI---SCGAHCTAAIAEPRE 134
++G ++ G G+LG G G P ++ L + VK + S G H A + +
Sbjct: 3005 AEGKVYACGEATNGRLGLGLSSGTIPIPRQISALSNYVVKKVAVHSGGRHAMALTVDGKV 3064
Query: 135 ND-GTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGY 193
G +L + + + PRL T I ++CGS H A++ G L +WG
Sbjct: 3065 FSWGEGDDGKLGHFSR-MNCDKPRLIEALKTKR--IRDIACGSSHSAAITSSGELYSWGL 3121
Query: 194 NEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCG--EYHSAAVSENGEVYT 251
EYG+LG G L+ P+++K L ++ QV+CG + + A+++ G V++
Sbjct: 3122 GEYGRLGHGDNTTQLR-PKLVK---VLLGH-----RVVQVACGSRDAQTLALTDEGMVFS 3172
Query: 252 WGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQ 311
WG G G+LG + + +P+ + L+G + + CG S ALT G ++ WG
Sbjct: 3173 WGDGDFGKLGRGGSEGCN---IPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGD 3229
Query: 312 AGQLGLG 318
+LG G
Sbjct: 3230 YFRLGHG 3236
Score = 254 (94.5 bits), Expect = 1.1e-31, Sum P(3) = 1.1e-31
Identities = 77/239 (32%), Positives = 115/239 (48%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHE--HT 74
I + +Y WG G+ G QLR PK L L G R + +ACG T
Sbjct: 3110 ITSSGELYSWGLGEYGRLGHGDNTTQLR-PK-LVKVLLG------HRVVQVACGSRDAQT 3161
Query: 75 AAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRE 134
A+ +G +F+WG +FG+LG G EG P+ +++L + V I CGA + A+ +
Sbjct: 3162 LALTDEGMVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTK--- 3218
Query: 135 NDGTISTSRLWVWGQNQGSNFPRLFWGAFT----PNTI-------ICQVSCGSVHVVALS 183
G + W WG+ G F RL G P + I V+ G++H +A++
Sbjct: 3219 -SGVV-----WTWGK--GDYF-RLGHGTDVHVRKPQMVEGLRGKKIVHVAVGALHCLAVT 3269
Query: 184 ECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAA 242
E G + AWG N++GQ G G T + P +++G E +KIT+V+CG HS A
Sbjct: 3270 ETGQVFAWGDNDHGQQGNGTTTVNRK-PTLVQGL--------EGQKITRVACGSSHSVA 3319
Score = 251 (93.4 bits), Expect = 1.9e-15, Sum P(2) = 1.9e-15
Identities = 93/308 (30%), Positives = 133/308 (43%)
Query: 74 TAAVASDGTLFTWGANEFGQLGDGTEEGR-KHPEKVKQLQSEFVKSISCGAHCTAAIAEP 132
T + GT++ WG N GQLG G E + K P + L + + G A+
Sbjct: 3943 TLSAGGSGTIYGWGHNHRGQLG-GIEGAKVKVPTPTEALATLRPVQLIGGEQTLFAVTAD 4001
Query: 133 RE--NDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQA 190
+ G + RL + G S P L V+ G H +ALS G L +
Sbjct: 4002 GKLYATGYGAGGRLGIGGTESVST-PTLLESIQHVFIRKVAVNSGGKHCLALSSEGELYS 4060
Query: 191 WGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVY 250
WG E G+LG G PRVI E+ ++ ++ G HSA ++ +GE+Y
Sbjct: 4061 WGEAEDGKLGHG-NRSPCDRPRVI--------ESLRGVEVVDIAAGGAHSACITASGELY 4111
Query: 251 TWGLGSVGQLGHCSLQSGDKE--LLPRRVVALDGIFIKDVACGG--VHSCALTSKGALYA 306
TWG G G+LGH GD E L P+ V AL G + DVACG + LT +++
Sbjct: 4112 TWGKGRYGRLGH-----GDSEDQLKPKLVEALQGHRVIDVACGSGDAQTLCLTDDDMVWS 4166
Query: 307 WGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQL-VACGHSHTLVYMRDGR 365
WG G+LG G +P + D+ + ++ V G Q VA S + G
Sbjct: 4167 WGDGDYGKLGRGGSDGC--KVPMKIDS-LTGLGVVKVECGSQFSVALTKSGAVYTWGKGD 4223
Query: 366 IHGWGYNS 373
H G+ S
Sbjct: 4224 YHRLGHGS 4231
Score = 234 (87.4 bits), Expect = 1.5e-13, Sum P(2) = 1.5e-13
Identities = 82/293 (27%), Positives = 125/293 (42%)
Query: 133 RENDGTIS---TSRLWVWGQNQGSNFPRLFWGAF---TPNTIIC-----QVSCGSVHVVA 181
R +D T+S + ++ WG N + TP + Q+ G + A
Sbjct: 3938 RPDDWTLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPTEALATLRPVQLIGGEQTLFA 3997
Query: 182 LSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSA 241
++ G L A GY G+LG G T E + P +++ + K+ V+ G H
Sbjct: 3998 VTADGKLYATGYGAGGRLGIGGT-ESVSTPTLLESIQHVF-----IRKVA-VNSGGKHCL 4050
Query: 242 AVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSK 301
A+S GE+Y+WG G+LGH + D+ PR + +L G+ + D+A GG HS +T+
Sbjct: 4051 ALSSEGELYSWGEAEDGKLGHGNRSPCDR---PRVIESLRGVEVVDIAAGGAHSACITAS 4107
Query: 302 GALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGH--SHTLV 359
G LY WG + G+LG G + D + + + V VACG + TL
Sbjct: 4108 GELYTWGKGRYGRLGHG----------DSEDQLKPKLVEALQGHRVIDVACGSGDAQTLC 4157
Query: 360 YMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVL 411
D + WG YG+ S P +D G V K+ G S L
Sbjct: 4158 LTDDDMVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVAL 4210
Score = 234 (87.4 bits), Expect = 8.2e-13, Sum P(3) = 8.2e-13
Identities = 67/208 (32%), Positives = 98/208 (47%)
Query: 169 ICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELE 228
+ ++CGS + A++ G L WG YG+LG G + E P ++ K L
Sbjct: 543 VVHIACGSTYSAAITADGELHTWGRGNYGRLGHG-SSEDQTTPMLVTAL-KGL------- 593
Query: 229 KITQVSCG--EYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIK 286
K+ V+CG + + AV+ENG+V++WG G G+LG G K P+ V L + I
Sbjct: 594 KVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGG-SDGCKT--PKLVEKLQDLDIV 650
Query: 287 DVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNG 346
V CG S ALT G +Y WG +LG G +D + R +L G
Sbjct: 651 KVCCGSQFSVALTKDGQVYTWGKGDNQRLGHG------------TDEHVRYPKLLDSLQG 698
Query: 347 VQLV--ACGHSHTLVYMRDGRIHGWGYN 372
++V A G +H L +G +H WG N
Sbjct: 699 KRVVDIAVGSTHCLALTEEGEVHSWGSN 726
Score = 202 (76.2 bits), Expect = 1.1e-31, Sum P(3) = 1.1e-31
Identities = 55/184 (29%), Positives = 85/184 (46%)
Query: 229 KITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKE--LLPRRVVALDGIFIK 286
++ ++ G HSA ++ +GE+YTWG G G+LGH GD E L P+ V AL G +
Sbjct: 4090 EVVDIAAGGAHSACITASGELYTWGKGRYGRLGH-----GDSEDQLKPKLVEALQGHRVI 4144
Query: 287 DVACGG--VHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVP 344
DVACG + LT +++WG G+LG G +P + D+ +
Sbjct: 4145 DVACGSGDAQTLCLTDDDMVWSWGDGDYGKLGRGGSDGC--KVPMKIDS--------LTG 4194
Query: 345 NGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAA 403
GV V CG ++ + G ++ WG Y + + + P V G+ V +A
Sbjct: 4195 LGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIAT 4254
Query: 404 GGGH 407
G H
Sbjct: 4255 GSLH 4258
Score = 198 (74.8 bits), Expect = 7.9e-09, Sum P(3) = 7.9e-09
Identities = 75/277 (27%), Positives = 129/277 (46%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGH--EHT 74
I A ++ WG + G+ G E Q P L G + +D+ACG T
Sbjct: 556 ITADGELHTWGRGNYGRLGHGSSE------DQTTPMLVTALKGL--KVIDVACGSGDAQT 607
Query: 75 AAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRE 134
AV +G +++WG ++G+LG G +G K P+ V++LQ + + CG+ + A+ +
Sbjct: 608 LAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLVEKLQDLDIVKVCCGSQFSVALTK--- 664
Query: 135 NDGTISTSRLWVWGQNQ----GSN----FPRLFWGAFTPNTIICQVSCGSVHVVALSECG 186
DG + T W G NQ G++ +P+L + ++ ++ GS H +AL+E G
Sbjct: 665 -DGQVYT---WGKGDNQRLGHGTDEHVRYPKLL-DSLQGKRVV-DIAVGSTHCLALTEEG 718
Query: 187 LLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSEN 246
+ +WG N+ Q + Q P+ + G L+ + I +SCG S + S
Sbjct: 719 EVHSWGSNDKLQHFDTLFSNKKQ-PKALPG----LNS----KHIVGISCGPGQSFSWSSC 769
Query: 247 GEVYTWGLGSVGQLGHCSLQSGDKELLPRRVV-ALDG 282
E ++ GL + C++ +LL R+V +DG
Sbjct: 770 SE-WSVGLRVPFVVDVCTMTFDQLDLLLRQVSEGMDG 805
Score = 191 (72.3 bits), Expect = 2.3e-09, Sum P(3) = 2.3e-09
Identities = 51/185 (27%), Positives = 88/185 (47%)
Query: 229 KITQVSCG--EYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIK 286
++ QV+CG + + A+++ G V++WG G G+LG + + +P+ + L+G +
Sbjct: 3148 RVVQVACGSRDAQTLALTDEGMVFSWGDGDFGKLGRGGSEGCN---IPQNIERLNGQGVC 3204
Query: 287 DVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNG 346
+ CG S ALT G ++ WG +LG G +D + R ++ G
Sbjct: 3205 QIECGAQFSLALTKSGVVWTWGKGDYFRLGHG------------TDVHVRKPQMVEGLRG 3252
Query: 347 VQLV--ACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAA 403
++V A G H L G++ WG N +GQ N +T P+ V G+ + ++A
Sbjct: 3253 KKIVHVAVGALHCLAVTETGQVFAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVAC 3312
Query: 404 GGGHS 408
G HS
Sbjct: 3313 GSSHS 3317
Score = 175 (66.7 bits), Expect = 7.1e-29, Sum P(3) = 7.1e-29
Identities = 46/131 (35%), Positives = 64/131 (48%)
Query: 230 ITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVA 289
+ +V CG S A++++G VYTWG G +LGH S D PR+V L G + +A
Sbjct: 4197 VVKVECGSQFSVALTKSGAVYTWGKGDYHRLGH---GSDDHVRRPRQVQGLQGKKVIAIA 4253
Query: 290 CGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQL 349
G +H T G +Y WG + GQLG G T + P R + L +
Sbjct: 4254 TGSLHCVCCTEDGEVYTWGDNDEGQLGDGT-TNAIQR-P-------RLVAALQGKK-INR 4303
Query: 350 VACGHSHTLVY 360
VACG +HTL +
Sbjct: 4304 VACGSAHTLAW 4314
Score = 174 (66.3 bits), Expect = 5.6e-07, Sum P(2) = 5.6e-07
Identities = 78/254 (30%), Positives = 111/254 (43%)
Query: 175 GSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKG--YAKFLDEAPELEKITQ 232
G + ALS G+ Q +E G L IT G + K A L A KI +
Sbjct: 431 GPIQCKALSNLGVTQIV-CSEKGFLILTIT--GAVYTQNYKSTTLAPMLVHALTSRKIMK 487
Query: 233 VSC---GEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELL--PRRVVALDGIFI-K 286
++ G+ H A+S NGEV++WG G G+LGH GD L P + G + K
Sbjct: 488 LAAHPDGQ-HYLALSVNGEVFSWGCGDGGRLGH-----GDTTYLEEPTMISVFSGRPVGK 541
Query: 287 DV---ACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVV 343
V ACG +S A+T+ G L+ WG G+LG G +E T P+LV
Sbjct: 542 QVVHIACGSTYSAAITADGELHTWGRGNYGRLGHGS---------SEDQT----TPMLVT 588
Query: 344 P-NGVQL--VACGH--SHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-E 397
G+++ VACG + TL +G++ WG YG+ S P V+ +
Sbjct: 589 ALKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLVEKLQDLD 648
Query: 398 VRKLAAGGGHSAVL 411
+ K+ G S L
Sbjct: 649 IVKVCCGSQFSVAL 662
Score = 173 (66.0 bits), Expect = 1.1e-28, Sum P(3) = 1.1e-28
Identities = 53/193 (27%), Positives = 89/193 (46%)
Query: 221 LDEAPELEKITQVSCG--EYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVV 278
L EA + ++ V+CG + + ++++ V++WG G G+LG G K +P ++
Sbjct: 4134 LVEALQGHRVIDVACGSGDAQTLCLTDDDMVWSWGDGDYGKLGRGG-SDGCK--VPMKID 4190
Query: 279 ALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNI 338
+L G+ + V CG S ALT GA+Y WG +LG G SD + R
Sbjct: 4191 SLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHG------------SDDHVRRP 4238
Query: 339 PILVVPNGVQLVAC--GHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG 396
+ G +++A G H + DG ++ WG N GQ + + P V G
Sbjct: 4239 RQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQG 4298
Query: 397 E-VRKLAAGGGHS 408
+ + ++A G H+
Sbjct: 4299 KKINRVACGSAHT 4311
Score = 160 (61.4 bits), Expect = 1.1e-05, Sum P(4) = 1.1e-05
Identities = 43/131 (32%), Positives = 64/131 (48%)
Query: 230 ITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVA 289
+ Q+ CG S A++++G V+TWG G +LGH + K P+ V L G I VA
Sbjct: 3203 VCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGTDVHVRK---PQMVEGLRGKKIVHVA 3259
Query: 290 CGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQL 349
G +H A+T G ++AWG + GQ G G T N T + + +
Sbjct: 3260 VGALHCLAVTETGQVFAWGDNDHGQQGNGTTT------VNRKPTLVQGLE----GQKITR 3309
Query: 350 VACGHSHTLVY 360
VACG SH++ +
Sbjct: 3310 VACGSSHSVAW 3320
Score = 54 (24.1 bits), Expect = 1.4e-10, Sum P(3) = 1.4e-10
Identities = 27/120 (22%), Positives = 46/120 (38%)
Query: 94 LGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTSRLWVWGQNQGS 153
L D TE R +KQ +S I C H +A+ R D ++T ++ N+
Sbjct: 2874 LNDCTEYHRYIEVAIKQCRSS---GIDCKIHGLSAVGRVRAEDEDLATVP-FLASDNEEE 2929
Query: 154 NFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRV 213
+ G+ + + S ++ WG N+ QLG GL+G ++
Sbjct: 2930 EDEKTATGSMSRKRLSGLESAATIRTKVF-------VWGLNDKDQLG------GLKGSKI 2976
Score = 43 (20.2 bits), Expect = 2.7e-15, Sum P(3) = 2.7e-15
Identities = 20/47 (42%), Positives = 23/47 (48%)
Query: 253 GLGSV-GQL-GHCSLQSGDKELLPRRV--VALDGIFIKDVACGGVHS 295
G SV GQ+ S S D LLP RV V G + D CGG +S
Sbjct: 4437 GTKSVFGQMCAKMSSFSPDSLLLPHRVWKVKFVGESVDD--CGGGYS 4481
Score = 41 (19.5 bits), Expect = 1.2e-21, Sum P(3) = 1.2e-21
Identities = 5/12 (41%), Positives = 9/12 (75%)
Query: 360 YMRDGRIHGWGY 371
+ DG ++GWG+
Sbjct: 3689 FTSDGSVNGWGW 3700
Score = 37 (18.1 bits), Expect = 1.1e-31, Sum P(3) = 1.1e-31
Identities = 6/12 (50%), Positives = 9/12 (75%)
Query: 404 GGGHSAVLADAC 415
GGG+S +A+ C
Sbjct: 4477 GGGYSESIAEMC 4488
Score = 37 (18.1 bits), Expect = 1.1e-31, Sum P(3) = 1.1e-31
Identities = 6/12 (50%), Positives = 10/12 (83%)
Query: 446 SEALARLCERLR 457
SE++A +CE L+
Sbjct: 4481 SESIAEMCEELQ 4492
>UNIPROTKB|E2RFW5 [details] [associations]
symbol:HERC4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005622 "intracellular" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
Pfam:PF00632 InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0016567 GO:GO:0005622
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 SUPFAM:SSF56204
GeneTree:ENSGT00660000095216 CTD:26091 KO:K10615 EMBL:AAEX03002773
GeneID:479225 KEGG:cfa:479225 RefSeq:XP_536367.2
Ensembl:ENSCAFT00000021404 Uniprot:E2RFW5
Length = 1049
Score = 357 (130.7 bits), Expect = 1.8e-31, P = 1.8e-31
Identities = 117/397 (29%), Positives = 182/397 (45%)
Query: 26 WGYNHSGQTGRKGRERQLRI-PKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGTLF 84
WG GQ G G + ++ + P++ + F N + D+ CG HT V DGT++
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRK--SDFF-----INKKVRDVGCGLRHTVFVLDDGTVY 56
Query: 85 TWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND--GTISTS 142
T G N+ GQLG E+ RK PE+V L ++ + ++SCG T A+ + + G S
Sbjct: 57 TCGCNDLGQLGH--EKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDG 114
Query: 143 RLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRG 202
+L + G + PR + I QV+CG H +ALS+ + WG N+YGQLG G
Sbjct: 115 QLGLLGSEECIRVPRNIKSL--SDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG 172
Query: 203 ITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGH 262
I C+ P++IK L P + QV+ G HS ++ +G ++ WG GQLG
Sbjct: 173 IDCKKQASPQLIKS----LLGIPFM----QVAAGGAHSFVLTLSGAIFGWGRNKFGQLG- 223
Query: 263 CSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTR 322
L + +P + +L I + CG H+ ALT +G ++ +G GQLG +
Sbjct: 224 --LNDENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG--HNST 279
Query: 323 SFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKS 382
S + P + +I + A S +Y + G G G +N KS
Sbjct: 280 SHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFG--LGGNGQLGTGSTSNRKS 337
Query: 383 TYA----WYP----SPVDWCVGE---VRKLAAGGGHS 408
+ W+P P D E V+++ +GG S
Sbjct: 338 PFTVKGNWFPYNGQCPPDIDSEEYFCVKRIFSGGDQS 374
Score = 311 (114.5 bits), Expect = 8.4e-25, P = 8.4e-25
Identities = 87/252 (34%), Positives = 123/252 (48%)
Query: 83 LFTWGANEFGQLGDG--TEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIS 140
+ WG FGQLG G EE P K ++ V+ + CG T + + DGT+
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLD----DGTVY 56
Query: 141 T---SRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYG 197
T + L G + P N I VSCG H +AL++ G + AWG + G
Sbjct: 57 TCGCNDLGQLGHEKSRKKPEQVVALDAQN--IVAVSCGEAHTLALNDKGQVYAWGLDSDG 114
Query: 198 QLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSV 257
QLG + E ++ PR IK + +I QV+CG YHS A+S+ EV+ WG
Sbjct: 115 QLGLLGSEECIRVPRNIKSLSDI--------QIVQVACGYYHSLALSKASEVFCWGQNKY 166
Query: 258 GQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGL 317
GQLG + K+ P+ + +L GI VA GG HS LT GA++ WG ++ GQLGL
Sbjct: 167 GQLG-LGIDC-KKQASPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGL 224
Query: 318 GPQTRSFSLIPN 329
+ + +PN
Sbjct: 225 NDENDRY--VPN 234
Score = 250 (93.1 bits), Expect = 7.0e-18, P = 7.0e-18
Identities = 73/247 (29%), Positives = 121/247 (48%)
Query: 20 KSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVAS 79
K +Y WG + GQ G G E +R+P+ + L ++ + + +ACG+ H+ A++
Sbjct: 102 KGQVYAWGLDSDGQLGLLGSEECIRVPRNIK-SL------SDIQIVQVACGYYHSLALSK 154
Query: 80 DGTLFTWGANEFGQLGDGTE-EGRKHPEKVKQLQS-EFVKSISCGAHC-TAAIAEPREND 136
+F WG N++GQLG G + + + P+ +K L F++ + GAH ++
Sbjct: 155 ASEVFCWGQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGW 214
Query: 137 GTISTSRLWVWGQNQGSNFPRLFWGAFTPNTI-ICQVSCGSVHVVALSECGLLQAWGYNE 195
G +L + +N P L T + IC CG H AL++ G + +G
Sbjct: 215 GRNKFGQLGLNDEND-RYVPNLLKSLRTQKIVYIC---CGEDHTAALTKEGGVFTFGAGG 270
Query: 196 YGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAA-VSENGEVYTWGL 254
YGQLG T + PR K + + +TQ++CG H++A V +G +Y++GL
Sbjct: 271 YGQLGHNSTSHEIN-PR------KVFELMGSI--VTQIACGRQHTSAFVPSSGRIYSFGL 321
Query: 255 GSVGQLG 261
G GQLG
Sbjct: 322 GGNGQLG 328
Score = 247 (92.0 bits), Expect = 1.5e-17, P = 1.5e-17
Identities = 70/186 (37%), Positives = 91/186 (48%)
Query: 228 EKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKD 287
+K+ V CG H+ V ++G VYT G +GQLGH + K+ P +VVALD I
Sbjct: 34 KKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGH---EKSRKK--PEQVVALDAQNIVA 88
Query: 288 VACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGV 347
V+CG H+ AL KG +YAWG GQLGL +P RNI L V
Sbjct: 89 VSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIR-VP-------RNIKSLSDIQIV 140
Query: 348 QLVACGHSHTLVYMRDGRIHGWGYNSYGQAA-NEKSTYAWYPSPVDWCVG-EVRKLAAGG 405
Q VACG+ H+L + + WG N YGQ P + +G ++AAGG
Sbjct: 141 Q-VACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQVAAGG 199
Query: 406 GHSAVL 411
HS VL
Sbjct: 200 AHSFVL 205
Score = 208 (78.3 bits), Expect = 3.0e-13, P = 3.0e-13
Identities = 62/202 (30%), Positives = 96/202 (47%)
Query: 21 SAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASD 80
S ++ WG N GQ G G + + + QL L G P ++ +A G H+ +
Sbjct: 156 SEVFCWGQNKYGQLGL-GIDCKKQASPQLIKSLLGIP------FMQVAAGGAHSFVLTLS 208
Query: 81 GTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIS 140
G +F WG N+FGQLG E R P +K L+++ + I CG TAA+ + +G +
Sbjct: 209 GAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRTQKIVYICCGEDHTAALTK----EGGVF 264
Query: 141 TSRLWVWGQ---NQGSNF--PRLFWGAFTPNTIICQVSCGSVHVVA-LSECGLLQAWGYN 194
T +GQ N S+ PR + +I+ Q++CG H A + G + ++G
Sbjct: 265 TFGAGGYGQLGHNSTSHEINPRKVFELM--GSIVTQIACGRQHTSAFVPSSGRIYSFGLG 322
Query: 195 EYGQLGRGITCEGLQGPRVIKG 216
GQLG G T + P +KG
Sbjct: 323 GNGQLGTGST-SNRKSPFTVKG 343
>UNIPROTKB|E2RFV1 [details] [associations]
symbol:HERC4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005622 "intracellular" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
Pfam:PF00632 InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0016567 GO:GO:0005622
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 SUPFAM:SSF56204
GeneTree:ENSGT00660000095216 CTD:26091 KO:K10615 OMA:KLVIQPT
EMBL:AAEX03002773 RefSeq:XP_849808.1 Ensembl:ENSCAFT00000021413
GeneID:479225 KEGG:cfa:479225 NextBio:20854436 Uniprot:E2RFV1
Length = 1057
Score = 357 (130.7 bits), Expect = 1.9e-31, P = 1.9e-31
Identities = 117/397 (29%), Positives = 182/397 (45%)
Query: 26 WGYNHSGQTGRKGRERQLRI-PKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGTLF 84
WG GQ G G + ++ + P++ + F N + D+ CG HT V DGT++
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRK--SDFF-----INKKVRDVGCGLRHTVFVLDDGTVY 56
Query: 85 TWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND--GTISTS 142
T G N+ GQLG E+ RK PE+V L ++ + ++SCG T A+ + + G S
Sbjct: 57 TCGCNDLGQLGH--EKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDG 114
Query: 143 RLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRG 202
+L + G + PR + I QV+CG H +ALS+ + WG N+YGQLG G
Sbjct: 115 QLGLLGSEECIRVPRNIKSL--SDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG 172
Query: 203 ITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGH 262
I C+ P++IK L P + QV+ G HS ++ +G ++ WG GQLG
Sbjct: 173 IDCKKQASPQLIKS----LLGIPFM----QVAAGGAHSFVLTLSGAIFGWGRNKFGQLG- 223
Query: 263 CSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTR 322
L + +P + +L I + CG H+ ALT +G ++ +G GQLG +
Sbjct: 224 --LNDENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG--HNST 279
Query: 323 SFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKS 382
S + P + +I + A S +Y + G G G +N KS
Sbjct: 280 SHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFG--LGGNGQLGTGSTSNRKS 337
Query: 383 TYA----WYP----SPVDWCVGE---VRKLAAGGGHS 408
+ W+P P D E V+++ +GG S
Sbjct: 338 PFTVKGNWFPYNGQCPPDIDSEEYFCVKRIFSGGDQS 374
Score = 311 (114.5 bits), Expect = 8.6e-25, P = 8.6e-25
Identities = 87/252 (34%), Positives = 123/252 (48%)
Query: 83 LFTWGANEFGQLGDG--TEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIS 140
+ WG FGQLG G EE P K ++ V+ + CG T + + DGT+
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLD----DGTVY 56
Query: 141 T---SRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYG 197
T + L G + P N I VSCG H +AL++ G + AWG + G
Sbjct: 57 TCGCNDLGQLGHEKSRKKPEQVVALDAQN--IVAVSCGEAHTLALNDKGQVYAWGLDSDG 114
Query: 198 QLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSV 257
QLG + E ++ PR IK + +I QV+CG YHS A+S+ EV+ WG
Sbjct: 115 QLGLLGSEECIRVPRNIKSLSDI--------QIVQVACGYYHSLALSKASEVFCWGQNKY 166
Query: 258 GQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGL 317
GQLG + K+ P+ + +L GI VA GG HS LT GA++ WG ++ GQLGL
Sbjct: 167 GQLG-LGIDC-KKQASPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGL 224
Query: 318 GPQTRSFSLIPN 329
+ + +PN
Sbjct: 225 NDENDRY--VPN 234
Score = 250 (93.1 bits), Expect = 7.1e-18, P = 7.1e-18
Identities = 73/247 (29%), Positives = 121/247 (48%)
Query: 20 KSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVAS 79
K +Y WG + GQ G G E +R+P+ + L ++ + + +ACG+ H+ A++
Sbjct: 102 KGQVYAWGLDSDGQLGLLGSEECIRVPRNIK-SL------SDIQIVQVACGYYHSLALSK 154
Query: 80 DGTLFTWGANEFGQLGDGTE-EGRKHPEKVKQLQS-EFVKSISCGAHC-TAAIAEPREND 136
+F WG N++GQLG G + + + P+ +K L F++ + GAH ++
Sbjct: 155 ASEVFCWGQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGW 214
Query: 137 GTISTSRLWVWGQNQGSNFPRLFWGAFTPNTI-ICQVSCGSVHVVALSECGLLQAWGYNE 195
G +L + +N P L T + IC CG H AL++ G + +G
Sbjct: 215 GRNKFGQLGLNDEND-RYVPNLLKSLRTQKIVYIC---CGEDHTAALTKEGGVFTFGAGG 270
Query: 196 YGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAA-VSENGEVYTWGL 254
YGQLG T + PR K + + +TQ++CG H++A V +G +Y++GL
Sbjct: 271 YGQLGHNSTSHEIN-PR------KVFELMGSI--VTQIACGRQHTSAFVPSSGRIYSFGL 321
Query: 255 GSVGQLG 261
G GQLG
Sbjct: 322 GGNGQLG 328
Score = 247 (92.0 bits), Expect = 1.5e-17, P = 1.5e-17
Identities = 70/186 (37%), Positives = 91/186 (48%)
Query: 228 EKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKD 287
+K+ V CG H+ V ++G VYT G +GQLGH + K+ P +VVALD I
Sbjct: 34 KKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGH---EKSRKK--PEQVVALDAQNIVA 88
Query: 288 VACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGV 347
V+CG H+ AL KG +YAWG GQLGL +P RNI L V
Sbjct: 89 VSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIR-VP-------RNIKSLSDIQIV 140
Query: 348 QLVACGHSHTLVYMRDGRIHGWGYNSYGQAA-NEKSTYAWYPSPVDWCVG-EVRKLAAGG 405
Q VACG+ H+L + + WG N YGQ P + +G ++AAGG
Sbjct: 141 Q-VACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQVAAGG 199
Query: 406 GHSAVL 411
HS VL
Sbjct: 200 AHSFVL 205
Score = 208 (78.3 bits), Expect = 3.0e-13, P = 3.0e-13
Identities = 62/202 (30%), Positives = 96/202 (47%)
Query: 21 SAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASD 80
S ++ WG N GQ G G + + + QL L G P ++ +A G H+ +
Sbjct: 156 SEVFCWGQNKYGQLGL-GIDCKKQASPQLIKSLLGIP------FMQVAAGGAHSFVLTLS 208
Query: 81 GTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIS 140
G +F WG N+FGQLG E R P +K L+++ + I CG TAA+ + +G +
Sbjct: 209 GAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRTQKIVYICCGEDHTAALTK----EGGVF 264
Query: 141 TSRLWVWGQ---NQGSNF--PRLFWGAFTPNTIICQVSCGSVHVVA-LSECGLLQAWGYN 194
T +GQ N S+ PR + +I+ Q++CG H A + G + ++G
Sbjct: 265 TFGAGGYGQLGHNSTSHEINPRKVFELM--GSIVTQIACGRQHTSAFVPSSGRIYSFGLG 322
Query: 195 EYGQLGRGITCEGLQGPRVIKG 216
GQLG G T + P +KG
Sbjct: 323 GNGQLGTGST-SNRKSPFTVKG 343
>UNIPROTKB|Q5GLZ8 [details] [associations]
symbol:HERC4 "Probable E3 ubiquitin-protein ligase HERC4"
species:9606 "Homo sapiens" [GO:0030154 "cell differentiation"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IBA] [GO:0005634
"nucleus" evidence=IBA] [GO:0005737 "cytoplasm" evidence=IBA]
[GO:0042787 "protein ubiquitination involved in ubiquitin-dependent
protein catabolic process" evidence=IBA] [GO:0007283
"spermatogenesis" evidence=ISS] Pfam:PF00632 InterPro:IPR000569
PROSITE:PS50237 SMART:SM00119 UniPathway:UPA00143
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005829 GO:GO:0005634
GO:GO:0005737 GO:GO:0030154 GO:GO:0007283 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 GO:GO:0042787
SUPFAM:SSF56204 eggNOG:COG5021 HOGENOM:HOG000208452
HOVERGEN:HBG050878 EMBL:AY221963 EMBL:AY650032 EMBL:AY650033
EMBL:AY650034 EMBL:AB046813 EMBL:AL356741 EMBL:AC024258
EMBL:AL133551 EMBL:BC039600 IPI:IPI00333067 IPI:IPI00552050
IPI:IPI00604497 IPI:IPI00827523 IPI:IPI00827948 IPI:IPI00827992
RefSeq:NP_056416.2 RefSeq:NP_071362.1 UniGene:Hs.51891 HSSP:Q9UEP9
ProteinModelPortal:Q5GLZ8 SMR:Q5GLZ8 IntAct:Q5GLZ8 STRING:Q5GLZ8
PhosphoSite:Q5GLZ8 DMDM:74707832 PaxDb:Q5GLZ8 PRIDE:Q5GLZ8
DNASU:26091 Ensembl:ENST00000277817 Ensembl:ENST00000373700
Ensembl:ENST00000395187 Ensembl:ENST00000395198
Ensembl:ENST00000412272 Ensembl:ENST00000473533
Ensembl:ENST00000492996 GeneID:26091 KEGG:hsa:26091 UCSC:uc001jng.4
UCSC:uc001jnh.4 UCSC:uc001jnk.3 UCSC:uc009xpr.3 CTD:26091
GeneCards:GC10M069681 HGNC:HGNC:24521 HPA:HPA045453 MIM:609248
neXtProt:NX_Q5GLZ8 PharmGKB:PA134949021 InParanoid:Q5GLZ8 KO:K10615
ChiTaRS:HERC4 GenomeRNAi:26091 NextBio:48027 ArrayExpress:Q5GLZ8
Bgee:Q5GLZ8 CleanEx:HS_HERC4 Genevestigator:Q5GLZ8 Uniprot:Q5GLZ8
Length = 1057
Score = 356 (130.4 bits), Expect = 2.4e-31, P = 2.4e-31
Identities = 110/370 (29%), Positives = 170/370 (45%)
Query: 26 WGYNHSGQTGRKGRERQLRI-PKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGTLF 84
WG GQ G G + ++ + P++ + F N R D+ CG HT V DGT++
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRK--SDFF-----INKRVRDVGCGLRHTVFVLDDGTVY 56
Query: 85 TWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND--GTISTS 142
T G N+ GQLG E+ RK PE+V L ++ + ++SCG T A+ + + G S
Sbjct: 57 TCGCNDLGQLGH--EKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDG 114
Query: 143 RLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRG 202
+L + G + PR + I QV+CG H +ALS+ + WG N+YGQLG G
Sbjct: 115 QLGLVGSEECIRVPRNIKSL--SDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG 172
Query: 203 ITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGH 262
C+ P+++K L P + QV+ G HS ++ +G ++ WG GQLG
Sbjct: 173 TDCKKQTSPQLLKS----LLGIPFM----QVAAGGAHSFVLTLSGAIFGWGRNKFGQLG- 223
Query: 263 CSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTR 322
L + +P + +L I + CG H+ ALT +G ++ +G GQLG +
Sbjct: 224 --LNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG--HNST 279
Query: 323 SFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKS 382
S + P + +I + A S +Y + G G G +N KS
Sbjct: 280 SHEINPRKVFELMGSIVTEIACGRQHTSAFVPSSGRIYSFG--LGGNGQLGTGSTSNRKS 337
Query: 383 TYA----WYP 388
+ WYP
Sbjct: 338 PFTVKGNWYP 347
Score = 309 (113.8 bits), Expect = 1.5e-24, P = 1.5e-24
Identities = 87/252 (34%), Positives = 123/252 (48%)
Query: 83 LFTWGANEFGQLGDG--TEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIS 140
+ WG FGQLG G EE P K ++ V+ + CG T + + DGT+
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLD----DGTVY 56
Query: 141 T---SRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYG 197
T + L G + P N I VSCG H +AL++ G + AWG + G
Sbjct: 57 TCGCNDLGQLGHEKSRKKPEQVVALDAQN--IVAVSCGEAHTLALNDKGQVYAWGLDSDG 114
Query: 198 QLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSV 257
QLG + E ++ PR IK + +I QV+CG YHS A+S+ EV+ WG
Sbjct: 115 QLGLVGSEECIRVPRNIKSLSDI--------QIVQVACGYYHSLALSKASEVFCWGQNKY 166
Query: 258 GQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGL 317
GQLG + K+ P+ + +L GI VA GG HS LT GA++ WG ++ GQLGL
Sbjct: 167 GQLGLGT--DCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGL 224
Query: 318 GPQTRSFSLIPN 329
+ + +PN
Sbjct: 225 NDENDRY--VPN 234
Score = 266 (98.7 bits), Expect = 1.2e-19, P = 1.2e-19
Identities = 73/243 (30%), Positives = 119/243 (48%)
Query: 172 VSCGSVHVVALSECGLLQAWGYNEYGQL-GRGITCEG---LQGPRVIKGYAKFLDEAPEL 227
V+ + ++VA+S CG N+ GQ+ G+ +G L G + + ++
Sbjct: 79 VALDAQNIVAVS-CGEAHTLALNDKGQVYAWGLDSDGQLGLVGSEECIRVPRNIKSLSDI 137
Query: 228 EKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKD 287
+ I QV+CG YHS A+S+ EV+ WG GQLG + K+ P+ + +L GI
Sbjct: 138 Q-IVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGT--DCKKQTSPQLLKSLLGIPFMQ 194
Query: 288 VACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGV 347
VA GG HS LT GA++ WG ++ GQLGL +E+D Y N+ + +
Sbjct: 195 VAAGGAHSFVLTLSGAIFGWGRNKFGQLGLN----------DENDRYVPNLLKSLRSQKI 244
Query: 348 QLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGG 406
+ CG HT ++G + +G YGQ + +++ P V +G V ++A G
Sbjct: 245 VYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTEIACGRQ 304
Query: 407 HSA 409
H++
Sbjct: 305 HTS 307
Score = 259 (96.2 bits), Expect = 7.0e-19, P = 7.0e-19
Identities = 81/224 (36%), Positives = 108/224 (48%)
Query: 191 WGYNEYGQLGRG-ITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEV 249
WG +GQLG G I E + PR + F+++ ++ V CG H+ V ++G V
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRK-SDF--FINK-----RVRDVGCGLRHTVFVLDDGTV 55
Query: 250 YTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGG 309
YT G +GQLGH + K+ P +VVALD I V+CG H+ AL KG +YAWG
Sbjct: 56 YTCGCNDLGQLGH---EKSRKK--PEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGL 110
Query: 310 SQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGW 369
GQLGL +P RNI L VQ VACG+ H+L + + W
Sbjct: 111 DSDGQLGLVGSEECIR-VP-------RNIKSLSDIQIVQ-VACGYYHSLALSKASEVFCW 161
Query: 370 GYNSYGQAA-NEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVL 411
G N YGQ P + +G ++AAGG HS VL
Sbjct: 162 GQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVL 205
Score = 250 (93.1 bits), Expect = 7.1e-18, P = 7.1e-18
Identities = 75/256 (29%), Positives = 127/256 (49%)
Query: 20 KSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVAS 79
K +Y WG + GQ G G E +R+P+ + L ++ + + +ACG+ H+ A++
Sbjct: 102 KGQVYAWGLDSDGQLGLVGSEECIRVPRNIK-SL------SDIQIVQVACGYYHSLALSK 154
Query: 80 DGTLFTWGANEFGQLGDGTE-EGRKHPEKVKQLQS-EFVKSISCGAHCTAAIAEPRENDG 137
+F WG N++GQLG GT+ + + P+ +K L F++ + GAH
Sbjct: 155 ASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVL--------- 205
Query: 138 TISTSRLWVWGQNQ----GSNFPRLFWGAFTPNTI-------ICQVSCGSVHVVALSECG 186
T+S + ++ WG+N+ G N + PN + I + CG H AL++ G
Sbjct: 206 TLSGA-IFGWGRNKFGQLGLNDEN---DRYVPNLLKSLRSQKIVYICCGEDHTAALTKEG 261
Query: 187 LLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAA-VSE 245
+ +G YGQLG T + PR K + + +T+++CG H++A V
Sbjct: 262 GVFTFGAGGYGQLGHNSTSHEIN-PR------KVFELMGSI--VTEIACGRQHTSAFVPS 312
Query: 246 NGEVYTWGLGSVGQLG 261
+G +Y++GLG GQLG
Sbjct: 313 SGRIYSFGLGGNGQLG 328
Score = 210 (79.0 bits), Expect = 1.8e-13, P = 1.8e-13
Identities = 62/202 (30%), Positives = 96/202 (47%)
Query: 21 SAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASD 80
S ++ WG N GQ G G + + + QL L G P ++ +A G H+ +
Sbjct: 156 SEVFCWGQNKYGQLGL-GTDCKKQTSPQLLKSLLGIP------FMQVAAGGAHSFVLTLS 208
Query: 81 GTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIS 140
G +F WG N+FGQLG E R P +K L+S+ + I CG TAA+ + +G +
Sbjct: 209 GAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTK----EGGVF 264
Query: 141 TSRLWVWGQ---NQGSNF--PRLFWGAFTPNTIICQVSCGSVHVVA-LSECGLLQAWGYN 194
T +GQ N S+ PR + +I+ +++CG H A + G + ++G
Sbjct: 265 TFGAGGYGQLGHNSTSHEINPRKVFELM--GSIVTEIACGRQHTSAFVPSSGRIYSFGLG 322
Query: 195 EYGQLGRGITCEGLQGPRVIKG 216
GQLG G T + P +KG
Sbjct: 323 GNGQLGTGST-SNRKSPFTVKG 343
>TAIR|locus:2163986 [details] [associations]
symbol:UVR8 "UVB-RESISTANCE 8" species:3702 "Arabidopsis
thaliana" [GO:0005737 "cytoplasm" evidence=ISM] [GO:0005085
"guanyl-nucleotide exchange factor activity" evidence=ISS]
[GO:0009411 "response to UV" evidence=IMP] [GO:0003682 "chromatin
binding" evidence=IDA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0010224 "response to UV-B"
evidence=IEP;IGI] [GO:0000785 "chromatin" evidence=IDA] [GO:0009649
"entrainment of circadian clock" evidence=IMP] [GO:0006007 "glucose
catabolic process" evidence=RCA] [GO:0042803 "protein
homodimerization activity" evidence=IDA] INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005829 GO:GO:0005634 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0009649 GO:GO:0000785 EMBL:AB007646
GO:GO:0003682 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
GO:GO:0005085 PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626
PROSITE:PS50012 GO:GO:0010224 eggNOG:COG5184 UniGene:At.49214
EMBL:AF130441 EMBL:AY125497 EMBL:BT000600 IPI:IPI00521473
PIR:T50662 RefSeq:NP_201191.1 PDB:4D9S PDB:4DNU PDB:4DNV PDB:4DNW
PDBsum:4D9S PDBsum:4DNU PDBsum:4DNV PDBsum:4DNW
ProteinModelPortal:Q9FN03 SMR:Q9FN03 DIP:DIP-59667N STRING:Q9FN03
PRIDE:Q9FN03 EnsemblPlants:AT5G63860.1 GeneID:836506
KEGG:ath:AT5G63860 TAIR:At5g63860 HOGENOM:HOG000240817
InParanoid:Q9FN03 OMA:GTLWCWG PhylomeDB:Q9FN03
ProtClustDB:CLSN2686209 Genevestigator:Q9FN03 Uniprot:Q9FN03
Length = 440
Score = 339 (124.4 bits), Expect = 8.8e-31, P = 8.8e-31
Identities = 96/265 (36%), Positives = 137/265 (51%)
Query: 65 LDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAH 124
L I+ G H+ A+ S + +WG E GQLG G E R P ++ L + S++CGA
Sbjct: 18 LIISAGASHSVALLSGDIVCSWGRGEDGQLGHGDAEDRPSPTQLSALDGHQIVSVTCGAD 77
Query: 125 CTAAIAEPRENDGTISTSRLWVWGQNQGSNFPRLFWG----AFTPNTI-------ICQVS 173
T A ++ G S W WG +F RL G FTP I I Q++
Sbjct: 78 HTVAYSQ----SGMEVYS--WGWG-----DFGRLGHGNSSDLFTPLPIKALHGIRIKQIA 126
Query: 174 CGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQV 233
CG H +A++ G +Q+WG N+ GQLG G T + L P+ I+ + E +I V
Sbjct: 127 CGDSHCLAVTMEGEVQSWGRNQNGQLGLGDTEDSLV-PQKIQAF--------EGIRIKMV 177
Query: 234 SCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGV 293
+ G H+AAV+E+G++Y WG G G LG L L+P RV + G + VACG
Sbjct: 178 AAGAEHTAAVTEDGDLYGWGWGRYGNLG---LGDRTDRLVPERVTSTGGEKMSMVACGWR 234
Query: 294 HSCALTSKGALYAWGGSQAGQLGLG 318
H+ +++ GALY +G S+ GQLG G
Sbjct: 235 HTISVSYSGALYTYGWSKYGQLGHG 259
Score = 324 (119.1 bits), Expect = 3.8e-29, P = 3.8e-29
Identities = 99/313 (31%), Positives = 150/313 (47%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPE-LFGCPAGANSRWLDIACGHEHTAAVASDG 81
+Y WG+ G+ G G L P LP + L G R IACG H AV +G
Sbjct: 89 VYSWGWGDFGRLGH-GNSSDLFTP--LPIKALHGI------RIKQIACGDSHCLAVTMEG 139
Query: 82 TLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIST 141
+ +WG N+ GQLG G E P+K++ + +K ++ GA TAA+ E DG +
Sbjct: 140 EVQSWGRNQNGQLGLGDTEDSLVPQKIQAFEGIRIKMVAAGAEHTAAVTE----DGDLYG 195
Query: 142 SRLWVWGQ----NQGSNFPRLFWGAFTPN--TIICQVSCGSVHVVALSECGLLQAWGYNE 195
W WG+ G RL T + V+CG H +++S G L +G+++
Sbjct: 196 ---WGWGRYGNLGLGDRTDRLVPERVTSTGGEKMSMVACGWRHTISVSYSGALYTYGWSK 252
Query: 196 YGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLG 255
YGQLG G + L P + EA I+Q+S G H+ A++ +G++Y WG
Sbjct: 253 YGQLGHGDLEDHLI-PHKL--------EALSNSFISQISGGWRHTMALTSDGKLYGWGWN 303
Query: 256 SVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQL 315
GQ+G + + + P +V D + V+CG H+ A+T + ++AWG GQL
Sbjct: 304 KFGQVG---VGNNLDQCSPVQVRFPDDQKVVQVSCGWRHTLAVTERNNVFAWGRGTNGQL 360
Query: 316 GLGPQT-RSFSLI 327
G+G R+F I
Sbjct: 361 GIGESVDRNFPKI 373
Score = 301 (111.0 bits), Expect = 5.9e-25, P = 5.9e-25
Identities = 76/212 (35%), Positives = 113/212 (53%)
Query: 169 ICQVSCGSVHVVALSECGL-LQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPEL 227
I V+CG+ H VA S+ G+ + +WG+ ++G+LG G + + L P IK
Sbjct: 69 IVSVTCGADHTVAYSQSGMEVYSWGWGDFGRLGHGNSSD-LFTPLPIKALHGI------- 120
Query: 228 EKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKD 287
+I Q++CG+ H AV+ GEV +WG GQLG L + L+P+++ A +GI IK
Sbjct: 121 -RIKQIACGDSHCLAVTMEGEVQSWGRNQNGQLG---LGDTEDSLVPQKIQAFEGIRIKM 176
Query: 288 VACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNG- 346
VA G H+ A+T G LY WG + G LGLG +T D R +P V G
Sbjct: 177 VAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRT----------D---RLVPERVTSTGG 223
Query: 347 --VQLVACGHSHTLVYMRDGRIHGWGYNSYGQ 376
+ +VACG HT+ G ++ +G++ YGQ
Sbjct: 224 EKMSMVACGWRHTISVSYSGALYTYGWSKYGQ 255
Score = 272 (100.8 bits), Expect = 2.5e-21, P = 2.5e-21
Identities = 69/178 (38%), Positives = 92/178 (51%)
Query: 229 KITQVSCGEYHSAAVSENG-EVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKD 287
+I V+CG H+ A S++G EVY+WG G G+LGH + S D P + AL GI IK
Sbjct: 68 QIVSVTCGADHTVAYSQSGMEVYSWGWGDFGRLGHGN--SSDL-FTPLPIKALHGIRIKQ 124
Query: 288 VACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGV 347
+ACG H A+T +G + +WG +Q GQLGLG T SL+P + F I I
Sbjct: 125 IACGDSHCLAVTMEGEVQSWGRNQNGQLGLG-DTED-SLVPQKIQA-FEGIRI------- 174
Query: 348 QLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGG 405
++VA G HT DG ++GWG+ YG T P V GE + A G
Sbjct: 175 KMVAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRTDRLVPERVTSTGGEKMSMVACG 232
Score = 228 (85.3 bits), Expect = 3.3e-16, P = 3.3e-16
Identities = 52/148 (35%), Positives = 81/148 (54%)
Query: 229 KITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDV 288
+I V+ G H+AAV+E+G++Y WG G G LG L L+P RV + G + V
Sbjct: 173 RIKMVAAGAEHTAAVTEDGDLYGWGWGRYGNLG---LGDRTDRLVPERVTSTGGEKMSMV 229
Query: 289 ACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQ 348
ACG H+ +++ GALY +G S+ GQLG G LIP++ + + +
Sbjct: 230 ACGWRHTISVSYSGALYTYGWSKYGQLGHGDLEDH--LIPHKLEALSNSF--------IS 279
Query: 349 LVACGHSHTLVYMRDGRIHGWGYNSYGQ 376
++ G HT+ DG+++GWG+N +GQ
Sbjct: 280 QISGGWRHTMALTSDGKLYGWGWNKFGQ 307
Score = 228 (85.3 bits), Expect = 3.3e-16, P = 3.3e-16
Identities = 63/194 (32%), Positives = 94/194 (48%)
Query: 224 APELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGI 283
AP K+ +S G HS A+ V +WG G GQLGH + D+ P ++ ALDG
Sbjct: 12 APP-RKVLIISAGASHSVALLSGDIVCSWGRGEDGQLGHGDAE--DRPS-PTQLSALDGH 67
Query: 284 FIKDVACGGVHSCALTSKGA-LYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILV 342
I V CG H+ A + G +Y+WG G+LG G N SD F +PI
Sbjct: 68 QIVSVTCGADHTVAYSQSGMEVYSWGWGDFGRLGHG----------NSSDL-FTPLPIKA 116
Query: 343 VPNGVQL--VACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVR 399
+ +G+++ +ACG SH L +G + WG N GQ + + P + G ++
Sbjct: 117 L-HGIRIKQIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGDTEDSLVPQKIQAFEGIRIK 175
Query: 400 KLAAGGGHSAVLAD 413
+AAG H+A + +
Sbjct: 176 MVAAGAEHTAAVTE 189
Score = 221 (82.9 bits), Expect = 2.1e-15, P = 2.1e-15
Identities = 56/168 (33%), Positives = 87/168 (51%)
Query: 228 EKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKD 287
EK++ V+CG H+ +VS +G +YT+G GQLGH L+ L+P ++ AL FI
Sbjct: 224 EKMSMVACGWRHTISVSYSGALYTYGWSKYGQLGHGDLED---HLIPHKLEALSNSFISQ 280
Query: 288 VACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILV-VPNG 346
++ G H+ ALTS G LY WG ++ GQ+G+G N D + P+ V P+
Sbjct: 281 ISGGWRHTMALTSDGKLYGWGWNKFGQVGVG----------NNLD---QCSPVQVRFPDD 327
Query: 347 VQLV--ACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVD 392
++V +CG HTL + WG + GQ +S +P ++
Sbjct: 328 QKVVQVSCGWRHTLAVTERNNVFAWGRGTNGQLGIGESVDRNFPKIIE 375
Score = 208 (78.3 bits), Expect = 6.2e-14, P = 6.2e-14
Identities = 59/189 (31%), Positives = 89/189 (47%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
+ + + WG N +GQ G E L +P+++ + F G + +A G EHTAA
Sbjct: 135 VTMEGEVQSWGRNQNGQLGLGDTEDSL-VPQKI--QAF---EGIRIKM--VAAGAEHTAA 186
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND 136
V DG L+ WG +G LG G R PE+V E + ++CG T +++
Sbjct: 187 VTEDGDLYGWGWGRYGNLGLGDRTDRLVPERVTSTGGEKMSMVACGWRHTISVSY----S 242
Query: 137 GTISTSRLWVWGQ-NQGSNFPRLFWGAFTP--NTIICQVSCGSVHVVALSECGLLQAWGY 193
G + T +GQ G L N+ I Q+S G H +AL+ G L WG+
Sbjct: 243 GALYTYGWSKYGQLGHGDLEDHLIPHKLEALSNSFISQISGGWRHTMALTSDGKLYGWGW 302
Query: 194 NEYGQLGRG 202
N++GQ+G G
Sbjct: 303 NKFGQVGVG 311
Score = 163 (62.4 bits), Expect = 6.6e-09, P = 6.6e-09
Identities = 48/146 (32%), Positives = 74/146 (50%)
Query: 16 NIPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTA 75
++ A+Y +G++ GQ G E L IP +L A +NS I+ G HT
Sbjct: 238 SVSYSGALYTYGWSKYGQLGHGDLEDHL-IPHKLE-------ALSNSFISQISGGWRHTM 289
Query: 76 AVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREN 135
A+ SDG L+ WG N+FGQ+G G + P +V+ + V +SCG T A+ E R N
Sbjct: 290 ALTSDGKLYGWGWNKFGQVGVGNNLDQCSPVQVRFPDDQKVVQVSCGWRHTLAVTE-RNN 348
Query: 136 D---GTISTSRLWVWGQNQGSNFPRL 158
G + +L + G++ NFP++
Sbjct: 349 VFAWGRGTNGQLGI-GESVDRNFPKI 373
>RGD|1308467 [details] [associations]
symbol:Rcbtb1 "regulator of chromosome condensation (RCC1) and
BTB (POZ) domain containing protein 1" species:10116 "Rattus
norvegicus" [GO:0005737 "cytoplasm" evidence=IEA;ISO]
InterPro:IPR000210 InterPro:IPR013069 Pfam:PF00651 PROSITE:PS50097
SMART:SM00225 RGD:1308467 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005737 Gene3D:3.30.710.10 InterPro:IPR011333 SUPFAM:SSF54695
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 EMBL:CH474049
GeneTree:ENSGT00700000104208 CTD:55213 KO:K11494 OMA:NCSNCLG
OrthoDB:EOG4MSCXX IPI:IPI00364409 RefSeq:NP_001101850.1
UniGene:Rn.229110 Ensembl:ENSRNOT00000037800 GeneID:361050
KEGG:rno:361050 UCSC:RGD:1308467 NextBio:675026 Uniprot:D4AD40
Length = 531
Score = 331 (121.6 bits), Expect = 1.2e-30, Sum P(2) = 1.2e-30
Identities = 97/305 (31%), Positives = 142/305 (46%)
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND 136
V +F +G N LG G + P+K++ L + +KS+S G+ ++ D
Sbjct: 37 VTDSDEVFVFGLNYSNCLGTGDNQSTLVPKKLEALCGKRIKSLSYGSGPHVLLST---ED 93
Query: 137 GTISTSRLWVWGQNQGSNFPRLFWG-AFTP-----NTIICQV---SCGSVHVVALSECGL 187
G + + WG N S P N ++ QV +CGS H +AL+ G
Sbjct: 94 GVV-----YAWGHNGYSQLGNGTTNQGIAPIQVCTNLLVKQVVEVACGSHHSMALAADGE 148
Query: 188 LQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENG 247
L AWGYN GQ+G G T PR + +K+ ++CG+ S AV ++G
Sbjct: 149 LFAWGYNNCGQVGSGSTANQ-PTPRKVTNCL-------HTKKVVNIACGQTSSMAVLDSG 200
Query: 248 EVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAW 307
EVY WG GQLG L + +L P RV AL G+ + + CG H+ ALT +G LYAW
Sbjct: 201 EVYGWGYNGNGQLG---LGNNGNQLTPVRVAALHGVCVNQIVCGYAHTLALTDEGLLYAW 257
Query: 308 GGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGV-QLVACGHSHT-LVYMRDGR 365
G + GQLG G + S P + I+V V ++ AC +HT + G
Sbjct: 258 GANTYGQLGTGSKNNLLS--PTQ---------IMVEKERVIEIAACHSTHTSAAKTQGGH 306
Query: 366 IHGWG 370
++ WG
Sbjct: 307 VYMWG 311
Score = 272 (100.8 bits), Expect = 9.5e-23, Sum P(2) = 9.5e-23
Identities = 76/234 (32%), Positives = 112/234 (47%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+Y WG+N Q G G Q P Q+ C + +++ACG H+ A+A+DG
Sbjct: 96 VYAWGHNGYSQLGN-GTTNQGIAPIQV------CTNLLVKQVVEVACGSHHSMALAADGE 148
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQ-LQSEFVKSISCGAHCTAAIAEPRENDGTIST 141
LF WG N GQ+G G+ + P KV L ++ V +I+CG + A+ + E G
Sbjct: 149 LFAWGYNNCGQVGSGSTANQPTPRKVTNCLHTKKVVNIACGQTSSMAVLDSGEVYGWGYN 208
Query: 142 SRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGR 201
+ N G+ + A + Q+ CG H +AL++ GLL AWG N YGQLG
Sbjct: 209 GNGQLGLGNNGNQLTPVRVAALH-GVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGT 267
Query: 202 GITCEGLQGPRVIKGYAKFLDEAPELEKITQVS-CGEYH-SAAVSENGEVYTWG 253
G + L P I E E++ +++ C H SAA ++ G VY WG
Sbjct: 268 G-SKNNLLSPTQIM---------VEKERVIEIAACHSTHTSAAKTQGGHVYMWG 311
Score = 245 (91.3 bits), Expect = 1.6e-19, Sum P(2) = 1.6e-19
Identities = 84/291 (28%), Positives = 123/291 (42%)
Query: 49 LPPELFGCPAGANSRWLDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKV 108
L P+ G + L G H DG ++ WG N + QLG+GT P +V
Sbjct: 63 LVPKKLEALCGKRIKSLSYGSG-PHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPIQV 121
Query: 109 -KQLQSEFVKSISCGAHCTAAIAEPRENDGTISTSRLWVWGQNQ----GSNF------PR 157
L + V ++CG+H + A+A DG L+ WG N GS PR
Sbjct: 122 CTNLLVKQVVEVACGSHHSMALAA----DG-----ELFAWGYNNCGQVGSGSTANQPTPR 172
Query: 158 LFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGY 217
++ ++CG +A+ + G + WGYN GQLG G L RV +
Sbjct: 173 KVTNCLHTKKVV-NIACGQTSSMAVLDSGEVYGWGYNGNGQLGLGNNGNQLTPVRVAALH 231
Query: 218 AKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKE--LLPR 275
+ Q+ CG H+ A+++ G +Y WG + GQLG +G K L P
Sbjct: 232 GVC---------VNQIVCGYAHTLALTDEGLLYAWGANTYGQLG-----TGSKNNLLSPT 277
Query: 276 RVVALDGIFIKDVACGGVH-SCALTSKGALYAWGGSQAGQLGLGPQTRSFS 325
+++ I+ AC H S A T G +Y WG + GQ + P FS
Sbjct: 278 QIMVEKERVIEIAACHSTHTSAAKTQGGHVYMWGQCR-GQSVILPHLTHFS 327
Score = 217 (81.4 bits), Expect = 3.0e-16, Sum P(2) = 3.0e-16
Identities = 56/187 (29%), Positives = 93/187 (49%)
Query: 227 LEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVV-ALDGIFI 285
++++ +V+CG +HS A++ +GE++ WG + GQ+G S + + PR+V L +
Sbjct: 127 VKQVVEVACGSHHSMALAADGELFAWGYNNCGQVGSGSTAN---QPTPRKVTNCLHTKKV 183
Query: 286 KDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVP- 344
++ACG S A+ G +Y WG + GQLGLG + P+ V
Sbjct: 184 VNIACGQTSSMAVLDSGEVYGWGYNGNGQLGLGNNGNQLT-------------PVRVAAL 230
Query: 345 NGVQL--VACGHSHTLVYMRDGRIHGWGYNSYGQ-AANEKSTYAWYPSPVDWCVGEVRKL 401
+GV + + CG++HTL +G ++ WG N+YGQ K+ SP V + R +
Sbjct: 231 HGVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGSKNNLL---SPTQIMVEKERVI 287
Query: 402 AAGGGHS 408
HS
Sbjct: 288 EIAACHS 294
Score = 178 (67.7 bits), Expect = 8.2e-12, Sum P(2) = 8.2e-12
Identities = 57/177 (32%), Positives = 89/177 (50%)
Query: 243 VSENGEVYTWGLGSVGQLGHCSLQSGDKE--LLPRRVVALDGIFIKDVACG-GVHSCALT 299
V+++ EV+ +GL +C L +GD + L+P+++ AL G IK ++ G G H T
Sbjct: 37 VTDSDEVFVFGLN----YSNC-LGTGDNQSTLVPKKLEALCGKRIKSLSYGSGPHVLLST 91
Query: 300 SKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLV 359
G +YAWG + QLG G T + + P + T N L+V V+ VACG H++
Sbjct: 92 EDGVVYAWGHNGYSQLGNG--TTNQGIAPIQVCT---N---LLVKQVVE-VACGSHHSMA 142
Query: 360 YMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG--EVRKLAAGGGHSAVLADA 414
DG + WGYN+ GQ + + P V C+ +V +A G S + D+
Sbjct: 143 LAADGELFAWGYNNCGQVGSGSTANQPTPRKVTNCLHTKKVVNIACGQTSSMAVLDS 199
Score = 165 (63.1 bits), Expect = 2.4e-10, Sum P(2) = 2.4e-10
Identities = 49/172 (28%), Positives = 79/172 (45%)
Query: 3 INEIIGETARPVDNIPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFG-CPAGAN 61
+N G+T+ + +Y WGYN +GQ G QL P ++ L G C N
Sbjct: 184 VNIACGQTSSMA--VLDSGEVYGWGYNGNGQLGLGNNGNQLT-PVRVAA-LHGVC---VN 236
Query: 62 SRWLDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISC 121
I CG+ HT A+ +G L+ WGAN +GQLG G++ P ++ + ++ +C
Sbjct: 237 Q----IVCGYAHTLALTDEGLLYAWGANTYGQLGTGSKNNLLSPTQIMVEKERVIEIAAC 292
Query: 122 -GAHCTAAIAEPRENDGTISTSRLWVWGQNQGSN--FPRLFWGAFTPNTIIC 170
H +AA + G +++WGQ +G + P L + T + C
Sbjct: 293 HSTHTSAA-----KTQG----GHVYMWGQCRGQSVILPHLTHFSCTDDVFAC 335
Score = 145 (56.1 bits), Expect = 3.9e-08, Sum P(2) = 3.9e-08
Identities = 53/186 (28%), Positives = 78/186 (41%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
+ A ++ WGYN+ GQ G Q P P ++ C + ++IACG + A
Sbjct: 143 LAADGELFAWGYNNCGQVGSGSTANQ---PT--PRKVTNCLH--TKKVVNIACGQTSSMA 195
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCG-AHCTAAIAEPREN 135
V G ++ WG N GQLG G + P +V L V I CG AH T A+ +
Sbjct: 196 VLDSGEVYGWGYNGNGQLGLGNNGNQLTPVRVAALHGVCVNQIVCGYAH-TLALTD---- 250
Query: 136 DGTISTSRLWVWGQNQ-GSNFPRLFWGAFTPNTIICQ-------VSCGSVHV-VALSECG 186
+G L+ WG N G +P I+ + +C S H A ++ G
Sbjct: 251 EGL-----LYAWGANTYGQLGTGSKNNLLSPTQIMVEKERVIEIAACHSTHTSAAKTQGG 305
Query: 187 LLQAWG 192
+ WG
Sbjct: 306 HVYMWG 311
Score = 57 (25.1 bits), Expect = 1.2e-30, Sum P(2) = 1.2e-30
Identities = 12/37 (32%), Positives = 18/37 (48%)
Query: 417 LKELCEFRLAESVTLSNASEIEDVASRTGSEALARLC 453
LK LC+ + +T+ NA + A R +E L C
Sbjct: 455 LKRLCQHIIKRGITVENAFSLFSAAVRYDAEDLEEFC 491
>MGI|MGI:1918580 [details] [associations]
symbol:Rcbtb1 "regulator of chromosome condensation (RCC1)
and BTB (POZ) domain containing protein 1" species:10090 "Mus
musculus" [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0016568 "chromatin
modification" evidence=IEA] InterPro:IPR000210 InterPro:IPR013069
Pfam:PF00651 PROSITE:PS50097 SMART:SM00225 MGI:MGI:1918580
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005634 GO:GO:0005737
GO:GO:0006355 GO:GO:0006351 GO:GO:0016568 Gene3D:3.30.710.10
InterPro:IPR011333 SUPFAM:SSF54695 GO:GO:0007049 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00625
PROSITE:PS00626 PROSITE:PS50012 eggNOG:COG5184
GeneTree:ENSGT00700000104208 CTD:55213 HOGENOM:HOG000065752
HOVERGEN:HBG053261 KO:K11494 OrthoDB:EOG4MSCXX EMBL:AK033501
EMBL:AK088299 EMBL:BC067005 IPI:IPI00469440 RefSeq:NP_082040.2
UniGene:Mm.234195 ProteinModelPortal:Q6NXM2 SMR:Q6NXM2
IntAct:Q6NXM2 STRING:Q6NXM2 PhosphoSite:Q6NXM2 PaxDb:Q6NXM2
PRIDE:Q6NXM2 Ensembl:ENSMUST00000022551 Ensembl:ENSMUST00000043227
GeneID:71330 KEGG:mmu:71330 UCSC:uc007ueb.2 InParanoid:Q6NXM2
NextBio:333557 Bgee:Q6NXM2 Genevestigator:Q6NXM2
GermOnline:ENSMUSG00000035469 Uniprot:Q6NXM2
Length = 531
Score = 328 (120.5 bits), Expect = 3.4e-30, Sum P(2) = 3.4e-30
Identities = 96/305 (31%), Positives = 143/305 (46%)
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND 136
V + +F +G N LG G + P+K++ L + +KS+S G+ + D
Sbjct: 37 VTDNDEVFVFGLNYSNCLGTGDNQSTLVPKKLEALCGKKIKSLSYGSGPHVLLTT---ED 93
Query: 137 GTISTSRLWVWGQN------QGSNFPRLFWGAFTPNTIICQV---SCGSVHVVALSECGL 187
G + + WG N G+ + N +I QV +CGS H +AL+ G
Sbjct: 94 GVV-----YAWGHNGYSQLGNGTTNQGIAPVQVCTNLLIKQVIEVACGSHHSMALAADGE 148
Query: 188 LQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENG 247
L AWGYN GQ+G G T PR + +++ ++CG+ S AV ++G
Sbjct: 149 LFAWGYNNCGQVGSGSTANQ-PTPRKVTNCL-------HTKRVVNIACGQTSSMAVLDSG 200
Query: 248 EVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAW 307
EVY WG GQLG L + +L P RV AL G+ + + CG H+ ALT +G LYAW
Sbjct: 201 EVYGWGYNGNGQLG---LGNNGNQLTPVRVAALHGMCVNQIVCGYAHTLALTDEGLLYAW 257
Query: 308 GGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGV-QLVACGHSHT-LVYMRDGR 365
G + GQLG G + S P + I+V V ++ AC +HT + G
Sbjct: 258 GANTYGQLGTGSKNNLLS--PTQ---------IMVEKERVIEIAACHSTHTSAAKTQGGH 306
Query: 366 IHGWG 370
++ WG
Sbjct: 307 VYMWG 311
Score = 273 (101.2 bits), Expect = 7.0e-23, Sum P(2) = 7.0e-23
Identities = 76/234 (32%), Positives = 112/234 (47%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+Y WG+N Q G G Q P Q+ C + +++ACG H+ A+A+DG
Sbjct: 96 VYAWGHNGYSQLGN-GTTNQGIAPVQV------CTNLLIKQVIEVACGSHHSMALAADGE 148
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQ-LQSEFVKSISCGAHCTAAIAEPRENDGTIST 141
LF WG N GQ+G G+ + P KV L ++ V +I+CG + A+ + E G
Sbjct: 149 LFAWGYNNCGQVGSGSTANQPTPRKVTNCLHTKRVVNIACGQTSSMAVLDSGEVYGWGYN 208
Query: 142 SRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGR 201
+ N G+ + A + Q+ CG H +AL++ GLL AWG N YGQLG
Sbjct: 209 GNGQLGLGNNGNQLTPVRVAALH-GMCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGT 267
Query: 202 GITCEGLQGPRVIKGYAKFLDEAPELEKITQVS-CGEYH-SAAVSENGEVYTWG 253
G + L P I E E++ +++ C H SAA ++ G VY WG
Sbjct: 268 G-SKNNLLSPTQIM---------VEKERVIEIAACHSTHTSAAKTQGGHVYMWG 311
Score = 244 (91.0 bits), Expect = 2.2e-19, Sum P(2) = 2.2e-19
Identities = 83/290 (28%), Positives = 122/290 (42%)
Query: 49 LPPELFGCPAGANSRWLDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKV 108
L P+ G + L G H DG ++ WG N + QLG+GT P +V
Sbjct: 63 LVPKKLEALCGKKIKSLSYGSG-PHVLLTTEDGVVYAWGHNGYSQLGNGTTNQGIAPVQV 121
Query: 109 -KQLQSEFVKSISCGAHCTAAIAEPRENDGTISTSRLWVWGQNQ----GSNF------PR 157
L + V ++CG+H + A+A DG L+ WG N GS PR
Sbjct: 122 CTNLLIKQVIEVACGSHHSMALAA----DG-----ELFAWGYNNCGQVGSGSTANQPTPR 172
Query: 158 LFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGY 217
++ ++CG +A+ + G + WGYN GQLG G L RV +
Sbjct: 173 KVTNCLHTKRVV-NIACGQTSSMAVLDSGEVYGWGYNGNGQLGLGNNGNQLTPVRVAALH 231
Query: 218 AKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKE--LLPR 275
+ Q+ CG H+ A+++ G +Y WG + GQLG +G K L P
Sbjct: 232 GMC---------VNQIVCGYAHTLALTDEGLLYAWGANTYGQLG-----TGSKNNLLSPT 277
Query: 276 RVVALDGIFIKDVACGGVH-SCALTSKGALYAWGGSQAGQLGLGPQTRSF 324
+++ I+ AC H S A T G +Y WG + GQ + P F
Sbjct: 278 QIMVEKERVIEIAACHSTHTSAAKTQGGHVYMWGQCR-GQSVILPHLTHF 326
Score = 232 (86.7 bits), Expect = 5.5e-18, Sum P(2) = 5.5e-18
Identities = 75/267 (28%), Positives = 115/267 (43%)
Query: 6 IIGETARPVDNIPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWL 65
+ G +A + ++V+G N+S G G + +PK+L E C G + L
Sbjct: 26 VFGTSANEAIYVTDNDEVFVFGLNYSNCLGT-GDNQSTLVPKKL--EAL-C--GKKIKSL 79
Query: 66 DIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKV-KQLQSEFVKSISCGAH 124
G H DG ++ WG N + QLG+GT P +V L + V ++CG+H
Sbjct: 80 SYGSG-PHVLLTTEDGVVYAWGHNGYSQLGNGTTNQGIAPVQVCTNLLIKQVIEVACGSH 138
Query: 125 CTAAIAEPRENDGTISTSRLWVWGQNQ----GSNF------PRLFWGAFTPNTIICQVSC 174
+ A+A DG L+ WG N GS PR ++ ++C
Sbjct: 139 HSMALAA----DG-----ELFAWGYNNCGQVGSGSTANQPTPRKVTNCLHTKRVV-NIAC 188
Query: 175 GSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVS 234
G +A+ + G + WGYN GQLG G L RV + + Q+
Sbjct: 189 GQTSSMAVLDSGEVYGWGYNGNGQLGLGNNGNQLTPVRVAALHGMC---------VNQIV 239
Query: 235 CGEYHSAAVSENGEVYTWGLGSVGQLG 261
CG H+ A+++ G +Y WG + GQLG
Sbjct: 240 CGYAHTLALTDEGLLYAWGANTYGQLG 266
Score = 217 (81.4 bits), Expect = 3.0e-16, Sum P(2) = 3.0e-16
Identities = 56/187 (29%), Positives = 92/187 (49%)
Query: 227 LEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVV-ALDGIFI 285
++++ +V+CG +HS A++ +GE++ WG + GQ+G S + + PR+V L +
Sbjct: 127 IKQVIEVACGSHHSMALAADGELFAWGYNNCGQVGSGSTAN---QPTPRKVTNCLHTKRV 183
Query: 286 KDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVP- 344
++ACG S A+ G +Y WG + GQLGLG + P+ V
Sbjct: 184 VNIACGQTSSMAVLDSGEVYGWGYNGNGQLGLGNNGNQLT-------------PVRVAAL 230
Query: 345 NG--VQLVACGHSHTLVYMRDGRIHGWGYNSYGQ-AANEKSTYAWYPSPVDWCVGEVRKL 401
+G V + CG++HTL +G ++ WG N+YGQ K+ SP V + R +
Sbjct: 231 HGMCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGSKNNLL---SPTQIMVEKERVI 287
Query: 402 AAGGGHS 408
HS
Sbjct: 288 EIAACHS 294
Score = 185 (70.2 bits), Expect = 1.3e-12, Sum P(2) = 1.3e-12
Identities = 59/197 (29%), Positives = 93/197 (47%)
Query: 223 EAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKE--LLPRRVVAL 280
EA + K + V++N EV+ +GL +C L +GD + L+P+++ AL
Sbjct: 17 EAGSIRKACVFGTSANEAIYVTDNDEVFVFGLN----YSNC-LGTGDNQSTLVPKKLEAL 71
Query: 281 DGIFIKDVACG-GVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIP 339
G IK ++ G G H T G +YAWG + QLG G T + + P + T N
Sbjct: 72 CGKKIKSLSYGSGPHVLLTTEDGVVYAWGHNGYSQLGNG--TTNQGIAPVQVCT---N-- 124
Query: 340 ILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVR 399
L++ ++ VACG H++ DG + WGYN+ GQ + + P V C+ R
Sbjct: 125 -LLIKQVIE-VACGSHHSMALAADGELFAWGYNNCGQVGSGSTANQPTPRKVTNCLHTKR 182
Query: 400 --KLAAGGGHSAVLADA 414
+A G S + D+
Sbjct: 183 VVNIACGQTSSMAVLDS 199
Score = 164 (62.8 bits), Expect = 3.0e-10, Sum P(2) = 3.0e-10
Identities = 49/172 (28%), Positives = 78/172 (45%)
Query: 3 INEIIGETARPVDNIPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFG-CPAGAN 61
+N G+T+ + +Y WGYN +GQ G QL P ++ L G C N
Sbjct: 184 VNIACGQTSSMA--VLDSGEVYGWGYNGNGQLGLGNNGNQLT-PVRVAA-LHGMC---VN 236
Query: 62 SRWLDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISC 121
I CG+ HT A+ +G L+ WGAN +GQLG G++ P ++ + ++ +C
Sbjct: 237 Q----IVCGYAHTLALTDEGLLYAWGANTYGQLGTGSKNNLLSPTQIMVEKERVIEIAAC 292
Query: 122 -GAHCTAAIAEPRENDGTISTSRLWVWGQNQGSN--FPRLFWGAFTPNTIIC 170
H +AA + G +++WGQ +G + P L T + C
Sbjct: 293 HSTHTSAA-----KTQG----GHVYMWGQCRGQSVILPHLTHFCCTDDVFAC 335
Score = 148 (57.2 bits), Expect = 1.8e-08, Sum P(2) = 1.8e-08
Identities = 54/186 (29%), Positives = 78/186 (41%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
+ A ++ WGYN+ GQ G Q P P ++ C R ++IACG + A
Sbjct: 143 LAADGELFAWGYNNCGQVGSGSTANQ---PT--PRKVTNCLH--TKRVVNIACGQTSSMA 195
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCG-AHCTAAIAEPREN 135
V G ++ WG N GQLG G + P +V L V I CG AH T A+ +
Sbjct: 196 VLDSGEVYGWGYNGNGQLGLGNNGNQLTPVRVAALHGMCVNQIVCGYAH-TLALTD---- 250
Query: 136 DGTISTSRLWVWGQNQ-GSNFPRLFWGAFTPNTIICQ-------VSCGSVHV-VALSECG 186
+G L+ WG N G +P I+ + +C S H A ++ G
Sbjct: 251 EGL-----LYAWGANTYGQLGTGSKNNLLSPTQIMVEKERVIEIAACHSTHTSAAKTQGG 305
Query: 187 LLQAWG 192
+ WG
Sbjct: 306 HVYMWG 311
Score = 57 (25.1 bits), Expect = 3.4e-30, Sum P(2) = 3.4e-30
Identities = 12/37 (32%), Positives = 18/37 (48%)
Query: 417 LKELCEFRLAESVTLSNASEIEDVASRTGSEALARLC 453
LK LC+ + +T+ NA + A R +E L C
Sbjct: 455 LKRLCQHIIKRGITVENAFSLFSAAVRYDAEDLEEFC 491
>ZFIN|ZDB-GENE-030131-7951 [details] [associations]
symbol:rcbtb1 "regulator of chromosome
condensation (RCC1) and BTB (POZ) domain containing protein 1"
species:7955 "Danio rerio" [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR000210 InterPro:IPR013069 Pfam:PF00651
PROSITE:PS50097 SMART:SM00225 INTERPRO:IPR000408 Pfam:PF00415
ZFIN:ZDB-GENE-030131-7951 Gene3D:3.30.710.10 InterPro:IPR011333
SUPFAM:SSF54695 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012
CTD:55213 HOVERGEN:HBG053261 KO:K11494 HSSP:O87916 EMBL:BC045877
IPI:IPI00503126 RefSeq:NP_956285.1 UniGene:Dr.5968
ProteinModelPortal:Q7ZVG0 GeneID:336007 KEGG:dre:336007
InParanoid:Q7ZVG0 NextBio:20811137 ArrayExpress:Q7ZVG0
Uniprot:Q7ZVG0
Length = 531
Score = 326 (119.8 bits), Expect = 5.6e-30, Sum P(2) = 5.6e-30
Identities = 102/306 (33%), Positives = 146/306 (47%)
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGA--HCTAAIAEPRE 134
+ D ++ G N LG G + P+K+ L + + S+S G+ H + E E
Sbjct: 37 ITHDDEVYVLGLNCSNCLGTGDSQSTIAPKKLDCLSGKKLISLSYGSGPH-VLLVTEDGE 95
Query: 135 ND--GTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWG 192
G S+L NQG + P L + +VSCGS H +AL+ G + AWG
Sbjct: 96 LYAWGHNGYSQLGNGTTNQGVS-PILV-STNLQGKRVTEVSCGSHHSLALTHEGEVFAWG 153
Query: 193 YNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTW 252
YN GQ+G G T PR + + + I ++CG+ S AV++NGEVY W
Sbjct: 154 YNNCGQVGSGSTANQ-PTPRKVSNCL-------QNKVIVNIACGQTSSMAVTDNGEVYGW 205
Query: 253 GLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQA 312
G GQLG L + +L P R++AL G + +A G HS ALT +G LYAWG +
Sbjct: 206 GYNGNGQLG---LGNNGNQLTPCRLIALQGFCVLQIASGYAHSLALTDEGLLYAWGANTY 262
Query: 313 GQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHT-LVYMRDGRIHGWGY 371
GQLG G +S L P + T I V++ AC +HT + G+++ WG
Sbjct: 263 GQLGTG--NKSNQLSPVQVMTEKERI--------VEIAACHSTHTSAAKTQSGQVYMWG- 311
Query: 372 NSYGQA 377
GQA
Sbjct: 312 QCRGQA 317
Score = 286 (105.7 bits), Expect = 1.4e-24, Sum P(2) = 1.4e-24
Identities = 97/328 (29%), Positives = 143/328 (43%)
Query: 6 IIGETARPVDNIPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWL 65
I G +A I +YV G N S G G + PK+L C +G L
Sbjct: 26 IFGASANEAIYITHDDEVYVLGLNCSNCLGT-GDSQSTIAPKKLD-----CLSGKKLISL 79
Query: 66 DIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVK-QLQSEFVKSISCGAH 124
G H V DG L+ WG N + QLG+GT P V LQ + V +SCG+H
Sbjct: 80 SYGSG-PHVLLVTEDGELYAWGHNGYSQLGNGTTNQGVSPILVSTNLQGKRVTEVSCGSH 138
Query: 125 CTAAIAEPREND--GTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVAL 182
+ A+ E G + ++ G PR N +I ++CG +A+
Sbjct: 139 HSLALTHEGEVFAWGYNNCGQVGS-GSTANQPTPRKVSNCLQ-NKVIVNIACGQTSSMAV 196
Query: 183 SECGLLQAWGYNEYGQLGRGITCEGLQGPRVI--KGYAKFLDEAPELEKITQVSCGEYHS 240
++ G + WGYN GQLG G L R+I +G+ + Q++ G HS
Sbjct: 197 TDNGEVYGWGYNGNGQLGLGNNGNQLTPCRLIALQGFC-----------VLQIASGYAHS 245
Query: 241 AAVSENGEVYTWGLGSVGQLGHCSLQSGDK--ELLPRRVVALDGIFIKDVACGGVH-SCA 297
A+++ G +Y WG + GQLG +G+K +L P +V+ ++ AC H S A
Sbjct: 246 LALTDEGLLYAWGANTYGQLG-----TGNKSNQLSPVQVMTEKERIVEIAACHSTHTSAA 300
Query: 298 LTSKGALYAWGGSQAGQLGLGPQTRSFS 325
T G +Y WG + GQ + P F+
Sbjct: 301 KTQSGQVYMWGQCR-GQAIVLPHLTHFA 327
Score = 223 (83.6 bits), Expect = 2.1e-15, P = 2.1e-15
Identities = 68/237 (28%), Positives = 108/237 (45%)
Query: 228 EKITQVSCGEY-HSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIK 286
+K+ +S G H V+E+GE+Y WG QLG+ + G +L L G +
Sbjct: 74 KKLISLSYGSGPHVLLVTEDGELYAWGHNGYSQLGNGTTNQGVSPILVS--TNLQGKRVT 131
Query: 287 DVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNG 346
+V+CG HS ALT +G ++AWG + GQ+G G + P + +N V+ N
Sbjct: 132 EVSCGSHHSLALTHEGEVFAWGYNNCGQVGSGSTANQPT--PRKVSNCLQN---KVIVN- 185
Query: 347 VQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGG 405
+ACG + ++ +G ++GWGYN GQ + P + G V ++A+G
Sbjct: 186 ---IACGQTSSMAVTDNGEVYGWGYNGNGQLGLGNNGNQLTPCRLIALQGFCVLQIASGY 242
Query: 406 GHSAVLADACSLKELCEFRLAESVTLSNASEIEDVASRTGSEALARLCERLREHSLH 462
HS L D L + T + ++++ V T E R+ E HS H
Sbjct: 243 AHSLALTDEGLLYAWGANTYGQLGTGNKSNQLSPVQVMTEKE---RIVEIAACHSTH 296
Score = 166 (63.5 bits), Expect = 1.4e-10, Sum P(2) = 1.4e-10
Identities = 48/170 (28%), Positives = 77/170 (45%)
Query: 3 INEIIGETARPVDNIPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANS 62
+N G+T+ + +Y WGYN +GQ G QL + + + F C
Sbjct: 184 VNIACGQTSSMA--VTDNGEVYGWGYNGNGQLGLGNNGNQLTPCRLIALQGF-CV----- 235
Query: 63 RWLDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCG 122
L IA G+ H+ A+ +G L+ WGAN +GQLG G + + P +V + V+ +C
Sbjct: 236 --LQIASGYAHSLALTDEGLLYAWGANTYGQLGTGNKSNQLSPVQVMTEKERIVEIAAC- 292
Query: 123 AHCTAAIAEPRENDGTISTSRLWVWGQNQGSNF--PRLFWGAFTPNTIIC 170
H T A ++ ++++WGQ +G P L A T + C
Sbjct: 293 -HSTHTSAAKTQS------GQVYMWGQCRGQAIVLPHLTHFASTDDVFAC 335
Score = 161 (61.7 bits), Expect = 5.1e-10, Sum P(2) = 5.1e-10
Identities = 60/201 (29%), Positives = 88/201 (43%)
Query: 224 APELEKITQVSC--GEYHSAAV--SENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVA 279
A EL I Q +C G + A+ + + EVY GL LG QS + P+++
Sbjct: 15 AQELSSIRQ-ACIFGASANEAIYITHDDEVYVLGLNCSNCLGTGDSQS---TIAPKKLDC 70
Query: 280 LDGIFIKDVACG-GVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNI 338
L G + ++ G G H +T G LYAWG + QLG G + S
Sbjct: 71 LSGKKLISLSYGSGPHVLLVTEDGELYAWGHNGYSQLGNGTTNQGVS------------- 117
Query: 339 PILVVPN--GVQL--VACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWC 394
PILV N G ++ V+CG H+L +G + WGYN+ GQ + + P V C
Sbjct: 118 PILVSTNLQGKRVTEVSCGSHHSLALTHEGEVFAWGYNNCGQVGSGSTANQPTPRKVSNC 177
Query: 395 VGE--VRKLAAGGGHSAVLAD 413
+ + +A G S + D
Sbjct: 178 LQNKVIVNIACGQTSSMAVTD 198
Score = 58 (25.5 bits), Expect = 5.6e-30, Sum P(2) = 5.6e-30
Identities = 12/37 (32%), Positives = 19/37 (51%)
Query: 417 LKELCEFRLAESVTLSNASEIEDVASRTGSEALARLC 453
LK+LC+ + +T+ NA + A R +E L C
Sbjct: 455 LKKLCQHIIKRGITVENAFSLLSAAIRYDAEDLEEFC 491
>POMBASE|SPBC557.03c [details] [associations]
symbol:pim1 "Ran GDP/GTP exchange factor" species:4896
"Schizosaccharomyces pombe" [GO:0000790 "nuclear chromatin"
evidence=IDA] [GO:0005087 "Ran guanyl-nucleotide exchange factor
activity" evidence=IGI] [GO:0005634 "nucleus" evidence=IDA]
[GO:0006406 "mRNA export from nucleus" evidence=IMP] [GO:0006407
"rRNA export from nucleus" evidence=ISO] [GO:0007093 "mitotic cell
cycle checkpoint" evidence=IMP] [GO:0007264 "small GTPase mediated
signal transduction" evidence=IC] [GO:0007346 "regulation of
mitotic cell cycle" evidence=IMP] [GO:0030071 "regulation of
mitotic metaphase/anaphase transition" evidence=IMP] [GO:0031291
"Ran protein signal transduction" evidence=IGI] [GO:0032888
"regulation of mitotic spindle elongation" evidence=IMP]
[GO:0042992 "negative regulation of transcription factor import
into nucleus" evidence=IMP] [GO:0060623 "regulation of chromosome
condensation" evidence=IGI] [GO:1901673 "regulation of spindle
assembly involved in mitosis" evidence=IMP] PomBase:SPBC557.03c
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0051301 GO:GO:0030071
EMBL:CU329671 GenomeReviews:CU329671_GR GO:GO:0000790
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0006406
GO:GO:0090307 GO:GO:0005087 PRINTS:PR00633 PROSITE:PS00625
PROSITE:PS00626 PROSITE:PS50012 GO:GO:0007093 eggNOG:COG5184
GO:GO:0060623 GO:GO:0042992 GO:GO:0006407 GO:GO:0031291 EMBL:M73528
PIR:B40039 PIR:T50368 RefSeq:NP_596026.1 ProteinModelPortal:P28745
STRING:P28745 EnsemblFungi:SPBC557.03c.1 GeneID:2541059
KEGG:spo:SPBC557.03c HOGENOM:HOG000170207 OMA:KGIVYAW
OrthoDB:EOG466ZVF NextBio:20802173 Uniprot:P28745
Length = 539
Score = 344 (126.2 bits), Expect = 5.6e-30, P = 5.6e-30
Identities = 126/437 (28%), Positives = 197/437 (45%)
Query: 10 TARPVDNIPA----KSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWL 65
+A+ ++ IP + +YV+G + G E + +L P L G +
Sbjct: 56 SAKRINKIPELPTERLNVYVFGSGSMNELGMGEEEMDVVYRPRLNPILSTDKVGV----V 111
Query: 66 DIACGHEHTAAVASDGTLFTWGANEFGQLGDGT-----EEGRK--------HPEKVKQLQ 112
D+A G H+AA++ DG ++TWG N+ LG T E G K P KV+
Sbjct: 112 DLAVGGMHSAALSHDGRVYTWGVNDDYALGRLTKDQKDENGDKVDNDLLEGTPSKVEGAL 171
Query: 113 SEF-VKSISCGAHCTAAIAEPR--ENDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTII 169
S V + C + TAAI + GT S V G + P I
Sbjct: 172 SHLRVTKVICSDNLTAAITDNGCCFTWGTFRCSD-GVLGYSDSQKRTAEPTQMRLPE--I 228
Query: 170 CQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAP-ELE 228
CQ++ G+ H++AL+ G + WG + QLGR + L+ R ++G L P L+
Sbjct: 229 CQLATGTDHIIALTTTGKVYTWGNGQQFQLGRRM----LERRR-LQG----LTPQPLALK 279
Query: 229 KITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKE-----LLPRRVVALDGI 283
I V G YHS A+ G VY WGL Q C ++ D+E P V AL+G
Sbjct: 280 NIISVGAGSYHSFAIDNKGRVYAWGLNITRQ---CGIEVEDEEEGAVITKPTLVDALEGY 336
Query: 284 FIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNES-DTYFRNIPILV 342
+K + G H+ AL G + AWG QLG+ +++ +E + Y+ + P ++
Sbjct: 337 NVKSITGGEHHTLALLEDGRVLAWGRDDRHQLGIPDNALPETVVKDEKGNNYYLSTPTII 396
Query: 343 --VPNGVQLVACGHSHTLVYMRDGRIHGWGY-NSY--GQAANEKSTYAWYPSPV-DWCVG 396
+ N +Q+V CG H L DG+++ WG +Y GQ N++ P+ V +
Sbjct: 397 PGLTNVIQVV-CGTHHNLAVTSDGKVYSWGSAENYEVGQGDNDEDVAV--PTLVRSKAIK 453
Query: 397 EVR-KLAAGGGHSAVLA 412
EV ++A GG +++A
Sbjct: 454 EVAIRVAGAGGQFSIIA 470
>UNIPROTKB|E1BVG2 [details] [associations]
symbol:RCBTB1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR000210 InterPro:IPR013069 Pfam:PF00651 PROSITE:PS50097
SMART:SM00225 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005737
Gene3D:3.30.710.10 InterPro:IPR011333 SUPFAM:SSF54695
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012
GeneTree:ENSGT00700000104208 OMA:NCSNCLG EMBL:AADN02005390
IPI:IPI00590638 Ensembl:ENSGALT00000027473 Uniprot:E1BVG2
Length = 531
Score = 327 (120.2 bits), Expect = 6.1e-30, Sum P(2) = 6.1e-30
Identities = 100/301 (33%), Positives = 147/301 (48%)
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
+F +G N LG G + P+K++ L + + S+S G+ + DG +
Sbjct: 43 VFVFGLNCSNCLGTGDSQSTIVPKKLEALCGKKISSLSYGSGPHVLLCT---EDGEV--- 96
Query: 143 RLWVWGQNQGSNFPRLFWGA----FTP-----NTI---ICQVSCGSVHVVALSECGLLQA 190
+ WG N + +L GA TP N + + +V+CGS H +ALS G L A
Sbjct: 97 --YAWGHN---GYSQLGNGATNQGVTPVQVCTNLLLKKVIEVACGSHHSMALSFDGDLYA 151
Query: 191 WGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVY 250
WGYN GQ+G G T PR + + L + + + ++CG+ S AV NGEVY
Sbjct: 152 WGYNNCGQVGSGSTANQ-PTPRRV---SNCLQD----KMVVGIACGQTSSMAVVNNGEVY 203
Query: 251 TWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGS 310
WG GQLG L + +L P RV AL G+ I +ACG H+ ALT +G LYAWG +
Sbjct: 204 GWGYNGNGQLG---LGNNGNQLTPCRVAALHGVCILQIACGYAHTLALTDEGLLYAWGAN 260
Query: 311 QAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHT-LVYMRDGRIHGW 369
GQLG G +S L P + ++ V++ AC +HT + G+++ W
Sbjct: 261 TYGQLGTG--NKSNQLSPLQI--------MMEKERVVEIAACHSAHTSAAKTQSGQVYMW 310
Query: 370 G 370
G
Sbjct: 311 G 311
Score = 275 (101.9 bits), Expect = 5.2e-23, Sum P(2) = 5.2e-23
Identities = 76/237 (32%), Positives = 115/237 (48%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+Y WG+N Q G G Q P Q+ C + +++ACG H+ A++ DG
Sbjct: 96 VYAWGHNGYSQLGN-GATNQGVTPVQV------CTNLLLKKVIEVACGSHHSMALSFDGD 148
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQ-LQSEFVKSISCGAHCTAAIAEPRE--NDGTI 139
L+ WG N GQ+G G+ + P +V LQ + V I+CG + A+ E G
Sbjct: 149 LYAWGYNNCGQVGSGSTANQPTPRRVSNCLQDKMVVGIACGQTSSMAVVNNGEVYGWGYN 208
Query: 140 STSRLWVWGQNQGSNFP-RLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQ 198
+L + G N P R+ A I Q++CG H +AL++ GLL AWG N YGQ
Sbjct: 209 GNGQLGL-GNNGNQLTPCRV---AALHGVCILQIACGYAHTLALTDEGLLYAWGANTYGQ 264
Query: 199 LGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVS-CGEYH-SAAVSENGEVYTWG 253
LG G L +++ E E++ +++ C H SAA +++G+VY WG
Sbjct: 265 LGTGNKSNQLSPLQIMM----------EKERVVEIAACHSAHTSAAKTQSGQVYMWG 311
Score = 240 (89.5 bits), Expect = 8.1e-19, Sum P(2) = 8.1e-19
Identities = 62/185 (33%), Positives = 93/185 (50%)
Query: 227 LEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVV-ALDGIFI 285
L+K+ +V+CG +HS A+S +G++Y WG + GQ+G S + + PRRV L +
Sbjct: 127 LKKVIEVACGSHHSMALSFDGDLYAWGYNNCGQVGSGSTAN---QPTPRRVSNCLQDKMV 183
Query: 286 KDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPN 345
+ACG S A+ + G +Y WG + GQLGLG L P + IL +
Sbjct: 184 VGIACGQTSSMAVVNNGEVYGWGYNGNGQLGLG--NNGNQLTPCRVAA-LHGVCILQI-- 238
Query: 346 GVQLVACGHSHTLVYMRDGRIHGWGYNSYGQ-AANEKSTYAWYPSPVDWCVGEVRKLAAG 404
ACG++HTL +G ++ WG N+YGQ KS SP+ + + R +
Sbjct: 239 -----ACGYAHTLALTDEGLLYAWGANTYGQLGTGNKSNQL---SPLQIMMEKERVVEIA 290
Query: 405 GGHSA 409
HSA
Sbjct: 291 ACHSA 295
Score = 180 (68.4 bits), Expect = 6.3e-12, Sum P(2) = 6.3e-12
Identities = 48/151 (31%), Positives = 74/151 (49%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+Y WGYN +GQ G QL P ++ L G L IACG+ HT A+ +G
Sbjct: 202 VYGWGYNGNGQLGLGNNGNQLT-PCRVAA-LHGVCI------LQIACGYAHTLALTDEGL 253
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISC-GAHCTAAIAEPRENDGTIST 141
L+ WGAN +GQLG G + + P ++ + V+ +C AH +AA + +
Sbjct: 254 LYAWGANTYGQLGTGNKSNQLSPLQIMMEKERVVEIAACHSAHTSAAKTQ---------S 304
Query: 142 SRLWVWGQNQGSN--FPRLFWGAFTPNTIIC 170
++++WGQ +G + P L A T + C
Sbjct: 305 GQVYMWGQCRGQSVVLPHLTHFACTDDVFAC 335
Score = 160 (61.4 bits), Expect = 1.1e-09, Sum P(2) = 1.1e-09
Identities = 49/170 (28%), Positives = 81/170 (47%)
Query: 244 SENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACG-GVHSCALTSKG 302
+ N EV+ +GL LG QS ++P+++ AL G I ++ G G H T G
Sbjct: 38 THNDEVFVFGLNCSNCLGTGDSQS---TIVPKKLEALCGKKISSLSYGSGPHVLLCTEDG 94
Query: 303 ALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMR 362
+YAWG + QLG G + + P + T N L++ ++ VACG H++
Sbjct: 95 EVYAWGHNGYSQLGNGATNQGVT--PVQVCT---N---LLLKKVIE-VACGSHHSMALSF 145
Query: 363 DGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLA 412
DG ++ WGYN+ GQ + + P V C+ + + G ++ +A
Sbjct: 146 DGDLYAWGYNNCGQVGSGSTANQPTPRRVSNCLQDKMVVGIACGQTSSMA 195
Score = 56 (24.8 bits), Expect = 6.1e-30, Sum P(2) = 6.1e-30
Identities = 12/37 (32%), Positives = 19/37 (51%)
Query: 417 LKELCEFRLAESVTLSNASEIEDVASRTGSEALARLC 453
LK+LC+ + +T+ NA + A R +E L C
Sbjct: 455 LKKLCQHIIKRGITVENAFSLLSAAVRYDAEDLEDFC 491
>UNIPROTKB|I3LCV3 [details] [associations]
symbol:RCBTB1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR000210
InterPro:IPR013069 Pfam:PF00651 PROSITE:PS50097 SMART:SM00225
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005737 Gene3D:3.30.710.10
InterPro:IPR011333 SUPFAM:SSF54695 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 GeneTree:ENSGT00700000104208 OMA:NCSNCLG
EMBL:FP325140 Ensembl:ENSSSCT00000023143 Uniprot:I3LCV3
Length = 560
Score = 324 (119.1 bits), Expect = 1.8e-29, Sum P(2) = 1.8e-29
Identities = 96/305 (31%), Positives = 142/305 (46%)
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND 136
V + +F +G N LG G + P+K++ L + +KS+S G+ ++ D
Sbjct: 66 VTDNDEVFVFGLNYSNCLGTGDNQSTLVPKKLEALCGKKIKSLSYGSGPHVLLST---ED 122
Query: 137 GTISTSRLWVWGQNQGSNFPRLFWG-AFTP-----NTIICQV---SCGSVHVVALSECGL 187
G + + WG N S P N +I QV +CGS H +AL+ G
Sbjct: 123 GVV-----YAWGHNGYSQLGNGTTNQGIAPIQVCTNLLIKQVVEVACGSHHSMALAADGE 177
Query: 188 LQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENG 247
+ AWGYN GQ+G G T PR + ++++ ++CG+ S AV +NG
Sbjct: 178 VFAWGYNNCGQVGSGSTANQ-PTPRKVTNCL-------HIKRVVSIACGQTSSMAVLDNG 229
Query: 248 EVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAW 307
EVY WG GQLG L + +L P RV AL + + + CG H+ ALT +G LYAW
Sbjct: 230 EVYGWGYNGNGQLG---LGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAW 286
Query: 308 GGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGV-QLVACGHSHT-LVYMRDGR 365
G + GQLG G + S P I+V V ++ AC +HT + G
Sbjct: 287 GANTYGQLGTGNKNNLLS--PAH---------IMVEKERVVEIAACHSAHTSAAKTQGGH 335
Query: 366 IHGWG 370
++ WG
Sbjct: 336 VYMWG 340
Score = 268 (99.4 bits), Expect = 3.1e-22, Sum P(2) = 3.1e-22
Identities = 76/234 (32%), Positives = 111/234 (47%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+Y WG+N Q G G Q P Q+ C + +++ACG H+ A+A+DG
Sbjct: 125 VYAWGHNGYSQLGN-GTTNQGIAPIQV------CTNLLIKQVVEVACGSHHSMALAADGE 177
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQ-LQSEFVKSISCGAHCTAAIAEPRENDGTIST 141
+F WG N GQ+G G+ + P KV L + V SI+CG + A+ + E G
Sbjct: 178 VFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVSIACGQTSSMAVLDNGEVYGWGYN 237
Query: 142 SRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGR 201
+ N G+ + A + + Q+ CG H +AL++ GLL AWG N YGQLG
Sbjct: 238 GNGQLGLGNNGNQLTPVRVAALH-SVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGT 296
Query: 202 GITCEGLQGPRVIKGYAKFLDEAPELEKITQVS-CGEYH-SAAVSENGEVYTWG 253
G L P I E E++ +++ C H SAA ++ G VY WG
Sbjct: 297 G-NKNNLLSPAHIM---------VEKERVVEIAACHSAHTSAAKTQGGHVYMWG 340
Score = 236 (88.1 bits), Expect = 1.9e-18, Sum P(2) = 1.9e-18
Identities = 81/291 (27%), Positives = 123/291 (42%)
Query: 49 LPPELFGCPAGANSRWLDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKV 108
L P+ G + L G H DG ++ WG N + QLG+GT P +V
Sbjct: 92 LVPKKLEALCGKKIKSLSYGSG-PHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPIQV 150
Query: 109 -KQLQSEFVKSISCGAHCTAAIAEPRENDGTISTSRLWVWGQNQ----GSNF------PR 157
L + V ++CG+H + A+A DG + + WG N GS PR
Sbjct: 151 CTNLLIKQVVEVACGSHHSMALAA----DGEV-----FAWGYNNCGQVGSGSTANQPTPR 201
Query: 158 LFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGY 217
++ ++CG +A+ + G + WGYN GQLG G L RV +
Sbjct: 202 KVTNCLHIKRVV-SIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGNNGNQLTPVRVAALH 260
Query: 218 AKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKE--LLPR 275
+ + Q+ CG H+ A+++ G +Y WG + GQLG +G+K L P
Sbjct: 261 SVC---------VNQIVCGYAHTLALTDEGLLYAWGANTYGQLG-----TGNKNNLLSPA 306
Query: 276 RVVALDGIFIKDVACGGVH-SCALTSKGALYAWGGSQAGQLGLGPQTRSFS 325
++ ++ AC H S A T G +Y WG + + L P FS
Sbjct: 307 HIMVEKERVVEIAACHSAHTSAAKTQGGHVYMWGQCRGQSVTL-PHLTHFS 356
Score = 223 (83.6 bits), Expect = 6.1e-17, Sum P(2) = 6.1e-17
Identities = 74/267 (27%), Positives = 116/267 (43%)
Query: 6 IIGETARPVDNIPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWL 65
+ G +A + ++V+G N+S G G + +PK+L E C G + L
Sbjct: 55 VFGTSANEALYVTDNDEVFVFGLNYSNCLGT-GDNQSTLVPKKL--EAL-C--GKKIKSL 108
Query: 66 DIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKV-KQLQSEFVKSISCGAH 124
G H DG ++ WG N + QLG+GT P +V L + V ++CG+H
Sbjct: 109 SYGSG-PHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPIQVCTNLLIKQVVEVACGSH 167
Query: 125 CTAAIAEPRENDGTISTSRLWVWGQNQ----GSNF------PRLFWGAFTPNTIICQVSC 174
+ A+A DG + + WG N GS PR ++ ++C
Sbjct: 168 HSMALAA----DGEV-----FAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVV-SIAC 217
Query: 175 GSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVS 234
G +A+ + G + WGYN GQLG G L RV ++ + Q+
Sbjct: 218 GQTSSMAVLDNGEVYGWGYNGNGQLGLGNNGNQLTPVRVAALHSVC---------VNQIV 268
Query: 235 CGEYHSAAVSENGEVYTWGLGSVGQLG 261
CG H+ A+++ G +Y WG + GQLG
Sbjct: 269 CGYAHTLALTDEGLLYAWGANTYGQLG 295
Score = 221 (82.9 bits), Expect = 1.0e-16, Sum P(2) = 1.0e-16
Identities = 59/185 (31%), Positives = 91/185 (49%)
Query: 227 LEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVV-ALDGIFI 285
++++ +V+CG +HS A++ +GEV+ WG + GQ+G S + + PR+V L +
Sbjct: 156 IKQVVEVACGSHHSMALAADGEVFAWGYNNCGQVGSGSTAN---QPTPRKVTNCLHIKRV 212
Query: 286 KDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPN 345
+ACG S A+ G +Y WG + GQLGLG L P R + V
Sbjct: 213 VSIACGQTSSMAVLDNGEVYGWGYNGNGQLGLG--NNGNQLTP------VRVAALHSVC- 263
Query: 346 GVQLVACGHSHTLVYMRDGRIHGWGYNSYGQ-AANEKSTYAWYPSPVDWCVGEVRKLAAG 404
V + CG++HTL +G ++ WG N+YGQ K+ SP V + R +
Sbjct: 264 -VNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGNKNNLL---SPAHIMVEKERVVEIA 319
Query: 405 GGHSA 409
HSA
Sbjct: 320 ACHSA 324
Score = 183 (69.5 bits), Expect = 2.1e-12, Sum P(2) = 2.1e-12
Identities = 55/173 (31%), Positives = 88/173 (50%)
Query: 243 VSENGEVYTWGLGSVGQLGHCSLQSGDKE--LLPRRVVALDGIFIKDVACG-GVHSCALT 299
V++N EV+ +GL +C L +GD + L+P+++ AL G IK ++ G G H T
Sbjct: 66 VTDNDEVFVFGLN----YSNC-LGTGDNQSTLVPKKLEALCGKKIKSLSYGSGPHVLLST 120
Query: 300 SKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLV 359
G +YAWG + QLG G T + + P + T N L++ V+ VACG H++
Sbjct: 121 EDGVVYAWGHNGYSQLGNG--TTNQGIAPIQVCT---N---LLIKQVVE-VACGSHHSMA 171
Query: 360 YMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLA 412
DG + WGYN+ GQ + + P V C+ R ++ G ++ +A
Sbjct: 172 LAADGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVSIACGQTSSMA 224
Score = 164 (62.8 bits), Expect = 2.8e-10, Sum P(2) = 2.8e-10
Identities = 46/151 (30%), Positives = 69/151 (45%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+Y WGYN +GQ G QL P ++ C N I CG+ HT A+ +G
Sbjct: 231 VYGWGYNGNGQLGLGNNGNQLT-PVRVAALHSVC---VNQ----IVCGYAHTLALTDEGL 282
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISC-GAHCTAAIAEPRENDGTIST 141
L+ WGAN +GQLG G + P + + V+ +C AH +AA + G
Sbjct: 283 LYAWGANTYGQLGTGNKNNLLSPAHIMVEKERVVEIAACHSAHTSAA-----KTQG---- 333
Query: 142 SRLWVWGQNQGSN--FPRLFWGAFTPNTIIC 170
+++WGQ +G + P L + T + C
Sbjct: 334 GHVYMWGQCRGQSVTLPHLTHFSSTDDVFAC 364
Score = 152 (58.6 bits), Expect = 6.1e-09, Sum P(2) = 6.1e-09
Identities = 53/181 (29%), Positives = 77/181 (42%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
+ A ++ WGYN+ GQ G Q P P ++ C R + IACG + A
Sbjct: 172 LAADGEVFAWGYNNCGQVGSGSTANQ---PT--PRKVTNCLH--IKRVVSIACGQTSSMA 224
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCG-AHCTAAIAEPREN 135
V +G ++ WG N GQLG G + P +V L S V I CG AH T A+ +
Sbjct: 225 VLDNGEVYGWGYNGNGQLGLGNNGNQLTPVRVAALHSVCVNQIVCGYAH-TLALTD---- 279
Query: 136 DGTISTSRLWVWGQNQGSNFPRLFWGAFT---PNTIICQVSCGSVHV-VALSECGLLQAW 191
+G + +GQ N L A ++ +C S H A ++ G + W
Sbjct: 280 EGLLYAWGANTYGQLGTGNKNNLLSPAHIMVEKERVVEIAACHSAHTSAAKTQGGHVYMW 339
Query: 192 G 192
G
Sbjct: 340 G 340
Score = 58 (25.5 bits), Expect = 1.8e-29, Sum P(2) = 1.8e-29
Identities = 12/37 (32%), Positives = 19/37 (51%)
Query: 417 LKELCEFRLAESVTLSNASEIEDVASRTGSEALARLC 453
LK+LC+ + +T+ NA + A R +E L C
Sbjct: 484 LKKLCQHIIKRGITVENAFSLFSAAVRYDAEDLEEFC 520
>UNIPROTKB|Q8NDN9 [details] [associations]
symbol:RCBTB1 "RCC1 and BTB domain-containing protein 1"
species:9606 "Homo sapiens" [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0007049 "cell
cycle" evidence=IEA] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IDA] InterPro:IPR000210 InterPro:IPR013069
Pfam:PF00651 PROSITE:PS50097 SMART:SM00225 INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005634 GO:GO:0005737 GO:GO:0006355
GO:GO:0006351 GO:GO:0016568 Gene3D:3.30.710.10 InterPro:IPR011333
SUPFAM:SSF54695 GO:GO:0007049 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626
PROSITE:PS50012 eggNOG:COG5184 EMBL:AL139321 EMBL:AF334406
EMBL:AJ319660 EMBL:AK096654 EMBL:AL833821 EMBL:BC038104
IPI:IPI00329626 IPI:IPI00973193 RefSeq:NP_060661.3
UniGene:Hs.508021 ProteinModelPortal:Q8NDN9 SMR:Q8NDN9
IntAct:Q8NDN9 MINT:MINT-4718485 STRING:Q8NDN9 PhosphoSite:Q8NDN9
DMDM:74751227 PRIDE:Q8NDN9 DNASU:55213 Ensembl:ENST00000258646
Ensembl:ENST00000378302 Ensembl:ENST00000546015 GeneID:55213
KEGG:hsa:55213 UCSC:uc001vde.1 CTD:55213 GeneCards:GC13M050106
HGNC:HGNC:18243 HPA:HPA045925 MIM:607867 neXtProt:NX_Q8NDN9
PharmGKB:PA134955699 HOGENOM:HOG000065752 HOVERGEN:HBG053261
InParanoid:Q8NDN9 KO:K11494 OMA:NCSNCLG OrthoDB:EOG4MSCXX
PhylomeDB:Q8NDN9 GenomeRNAi:55213 NextBio:59164 ArrayExpress:Q8NDN9
Bgee:Q8NDN9 CleanEx:HS_RCBTB1 Genevestigator:Q8NDN9
GermOnline:ENSG00000136144 Uniprot:Q8NDN9
Length = 531
Score = 322 (118.4 bits), Expect = 2.1e-29, Sum P(2) = 2.1e-29
Identities = 95/305 (31%), Positives = 143/305 (46%)
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND 136
V + +F +G N LG G + P+K++ L + +KS+S G+ ++ D
Sbjct: 37 VTDNDEVFVFGLNYSNCLGTGDNQSTLVPKKLEGLCGKKIKSLSYGSGPHVLLST---ED 93
Query: 137 GTISTSRLWVWGQN------QGSNFPRLFWGAFTPNTIICQV---SCGSVHVVALSECGL 187
G + + WG N G+ + N +I QV +CGS H +AL+ G
Sbjct: 94 GVV-----YAWGHNGYSQLGNGTTNQGIAPVQVCTNLLIKQVVEVACGSHHSMALAADGE 148
Query: 188 LQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENG 247
+ AWGYN GQ+G G T PR + ++++ ++CG+ S AV +NG
Sbjct: 149 VFAWGYNNCGQVGSGSTANQ-PTPRKVTNCL-------HIKRVVGIACGQTSSMAVLDNG 200
Query: 248 EVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAW 307
EVY WG GQLG L + +L P RV AL + + + CG H+ ALT +G LYAW
Sbjct: 201 EVYGWGYNGNGQLG---LGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAW 257
Query: 308 GGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGV-QLVACGHSHT-LVYMRDGR 365
G + GQLG G + S P I+V V ++ AC +HT + G
Sbjct: 258 GANTYGQLGTGNKNNLLS--PAH---------IMVEKERVVEIAACHSAHTSAAKTQGGH 306
Query: 366 IHGWG 370
++ WG
Sbjct: 307 VYMWG 311
Score = 265 (98.3 bits), Expect = 5.2e-22, Sum P(2) = 5.2e-22
Identities = 75/234 (32%), Positives = 110/234 (47%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+Y WG+N Q G G Q P Q+ C + +++ACG H+ A+A+DG
Sbjct: 96 VYAWGHNGYSQLGN-GTTNQGIAPVQV------CTNLLIKQVVEVACGSHHSMALAADGE 148
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQ-LQSEFVKSISCGAHCTAAIAEPRENDGTIST 141
+F WG N GQ+G G+ + P KV L + V I+CG + A+ + E G
Sbjct: 149 VFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGYN 208
Query: 142 SRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGR 201
+ N G+ + A + + Q+ CG H +AL++ GLL AWG N YGQLG
Sbjct: 209 GNGQLGLGNNGNQLTPVRVAALH-SVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGT 267
Query: 202 GITCEGLQGPRVIKGYAKFLDEAPELEKITQVS-CGEYH-SAAVSENGEVYTWG 253
G L P I E E++ +++ C H SAA ++ G VY WG
Sbjct: 268 G-NKNNLLSPAHIM---------VEKERVVEIAACHSAHTSAAKTQGGHVYMWG 311
Score = 240 (89.5 bits), Expect = 5.0e-19, Sum P(2) = 5.0e-19
Identities = 83/291 (28%), Positives = 126/291 (43%)
Query: 49 LPPELFGCPAGANSRWLDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKV 108
+P +L G G + L G H DG ++ WG N + QLG+GT P +V
Sbjct: 64 VPKKLEGL-CGKKIKSLSYGSG-PHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPVQV 121
Query: 109 -KQLQSEFVKSISCGAHCTAAIAEPRENDGTISTSRLWVWGQNQ----GSNF------PR 157
L + V ++CG+H + A+A DG + + WG N GS PR
Sbjct: 122 CTNLLIKQVVEVACGSHHSMALAA----DGEV-----FAWGYNNCGQVGSGSTANQPTPR 172
Query: 158 LFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGY 217
++ ++CG +A+ + G + WGYN GQLG G L RV +
Sbjct: 173 KVTNCLHIKRVV-GIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGNNGNQLTPVRVAALH 231
Query: 218 AKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKE--LLPR 275
+ + Q+ CG H+ A+++ G +Y WG + GQLG +G+K L P
Sbjct: 232 SVC---------VNQIVCGYAHTLALTDEGLLYAWGANTYGQLG-----TGNKNNLLSPA 277
Query: 276 RVVALDGIFIKDVACGGVH-SCALTSKGALYAWGGSQAGQLGLGPQTRSFS 325
++ ++ AC H S A T G +Y WG + GQ + P FS
Sbjct: 278 HIMVEKERVVEIAACHSAHTSAAKTQGGHVYMWGQCR-GQSVILPHLTHFS 327
Score = 220 (82.5 bits), Expect = 1.1e-16, Sum P(2) = 1.1e-16
Identities = 59/185 (31%), Positives = 91/185 (49%)
Query: 227 LEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVV-ALDGIFI 285
++++ +V+CG +HS A++ +GEV+ WG + GQ+G S + + PR+V L +
Sbjct: 127 IKQVVEVACGSHHSMALAADGEVFAWGYNNCGQVGSGSTAN---QPTPRKVTNCLHIKRV 183
Query: 286 KDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPN 345
+ACG S A+ G +Y WG + GQLGLG L P R + V
Sbjct: 184 VGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLG--NNGNQLTP------VRVAALHSVC- 234
Query: 346 GVQLVACGHSHTLVYMRDGRIHGWGYNSYGQ-AANEKSTYAWYPSPVDWCVGEVRKLAAG 404
V + CG++HTL +G ++ WG N+YGQ K+ SP V + R +
Sbjct: 235 -VNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGNKNNLL---SPAHIMVEKERVVEIA 290
Query: 405 GGHSA 409
HSA
Sbjct: 291 ACHSA 295
Score = 219 (82.2 bits), Expect = 1.4e-16, Sum P(2) = 1.4e-16
Identities = 73/267 (27%), Positives = 115/267 (43%)
Query: 6 IIGETARPVDNIPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWL 65
+ G +A + ++V+G N+S G G + +PK+L G G + L
Sbjct: 26 VFGTSASEALYVTDNDEVFVFGLNYSNCLGT-GDNQSTLVPKKLE----GL-CGKKIKSL 79
Query: 66 DIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKV-KQLQSEFVKSISCGAH 124
G H DG ++ WG N + QLG+GT P +V L + V ++CG+H
Sbjct: 80 SYGSG-PHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPVQVCTNLLIKQVVEVACGSH 138
Query: 125 CTAAIAEPRENDGTISTSRLWVWGQNQ----GSNF------PRLFWGAFTPNTIICQVSC 174
+ A+A DG + + WG N GS PR ++ ++C
Sbjct: 139 HSMALAA----DGEV-----FAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVV-GIAC 188
Query: 175 GSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVS 234
G +A+ + G + WGYN GQLG G L RV ++ + Q+
Sbjct: 189 GQTSSMAVLDNGEVYGWGYNGNGQLGLGNNGNQLTPVRVAALHSVC---------VNQIV 239
Query: 235 CGEYHSAAVSENGEVYTWGLGSVGQLG 261
CG H+ A+++ G +Y WG + GQLG
Sbjct: 240 CGYAHTLALTDEGLLYAWGANTYGQLG 266
Score = 178 (67.7 bits), Expect = 6.5e-12, Sum P(2) = 6.5e-12
Identities = 54/173 (31%), Positives = 86/173 (49%)
Query: 243 VSENGEVYTWGLGSVGQLGHCSLQSGDKE--LLPRRVVALDGIFIKDVACG-GVHSCALT 299
V++N EV+ +GL +C L +GD + L+P+++ L G IK ++ G G H T
Sbjct: 37 VTDNDEVFVFGLN----YSNC-LGTGDNQSTLVPKKLEGLCGKKIKSLSYGSGPHVLLST 91
Query: 300 SKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLV 359
G +YAWG + QLG G T + + P + T N L++ V+ VACG H++
Sbjct: 92 EDGVVYAWGHNGYSQLGNG--TTNQGIAPVQVCT---N---LLIKQVVE-VACGSHHSMA 142
Query: 360 YMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLA 412
DG + WGYN+ GQ + + P V C+ R + G ++ +A
Sbjct: 143 LAADGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVGIACGQTSSMA 195
Score = 164 (62.8 bits), Expect = 2.4e-10, Sum P(2) = 2.4e-10
Identities = 46/151 (30%), Positives = 69/151 (45%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+Y WGYN +GQ G QL P ++ C N I CG+ HT A+ +G
Sbjct: 202 VYGWGYNGNGQLGLGNNGNQLT-PVRVAALHSVC---VNQ----IVCGYAHTLALTDEGL 253
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISC-GAHCTAAIAEPRENDGTIST 141
L+ WGAN +GQLG G + P + + V+ +C AH +AA + G
Sbjct: 254 LYAWGANTYGQLGTGNKNNLLSPAHIMVEKERVVEIAACHSAHTSAA-----KTQG---- 304
Query: 142 SRLWVWGQNQGSN--FPRLFWGAFTPNTIIC 170
+++WGQ +G + P L + T + C
Sbjct: 305 GHVYMWGQCRGQSVILPHLTHFSCTDDVFAC 335
Score = 151 (58.2 bits), Expect = 6.7e-09, Sum P(2) = 6.7e-09
Identities = 53/181 (29%), Positives = 77/181 (42%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
+ A ++ WGYN+ GQ G Q P P ++ C R + IACG + A
Sbjct: 143 LAADGEVFAWGYNNCGQVGSGSTANQ---PT--PRKVTNCLH--IKRVVGIACGQTSSMA 195
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCG-AHCTAAIAEPREN 135
V +G ++ WG N GQLG G + P +V L S V I CG AH T A+ +
Sbjct: 196 VLDNGEVYGWGYNGNGQLGLGNNGNQLTPVRVAALHSVCVNQIVCGYAH-TLALTD---- 250
Query: 136 DGTISTSRLWVWGQNQGSNFPRLFWGAFT---PNTIICQVSCGSVHV-VALSECGLLQAW 191
+G + +GQ N L A ++ +C S H A ++ G + W
Sbjct: 251 EGLLYAWGANTYGQLGTGNKNNLLSPAHIMVEKERVVEIAACHSAHTSAAKTQGGHVYMW 310
Query: 192 G 192
G
Sbjct: 311 G 311
Score = 58 (25.5 bits), Expect = 2.1e-29, Sum P(2) = 2.1e-29
Identities = 12/37 (32%), Positives = 19/37 (51%)
Query: 417 LKELCEFRLAESVTLSNASEIEDVASRTGSEALARLC 453
LK+LC+ + +T+ NA + A R +E L C
Sbjct: 455 LKKLCQHIIKRGITVENAFSLFSAAVRYDAEDLEEFC 491
>TAIR|locus:2076889 [details] [associations]
symbol:AT3G02510 "AT3G02510" species:3702 "Arabidopsis
thaliana" [GO:0003682 "chromatin binding" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISM] [GO:0005886 "plasma membrane"
evidence=ISM] [GO:0008150 "biological_process" evidence=ND]
[GO:0008536 "Ran GTPase binding" evidence=ISS] INTERPRO:IPR000408
Pfam:PF00415 EMBL:CP002686 GenomeReviews:BA000014_GR
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 UniGene:At.20016
UniGene:At.41128 EMBL:AK227929 IPI:IPI00539921 RefSeq:NP_186900.3
UniGene:At.70614 ProteinModelPortal:Q0WSJ9 SMR:Q0WSJ9 PRIDE:Q0WSJ9
EnsemblPlants:AT3G02510.1 GeneID:821100 KEGG:ath:AT3G02510
TAIR:At3g02510 OMA:NGGVQCW PhylomeDB:Q0WSJ9 Genevestigator:Q2V3Z2
Uniprot:Q0WSJ9
Length = 393
Score = 326 (119.8 bits), Expect = 2.2e-29, P = 2.2e-29
Identities = 103/348 (29%), Positives = 155/348 (44%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ WG+N G G + + IP ++ A AN + A G H AV G
Sbjct: 59 MFTWGWNQRGTLGHQPETKTENIPSRVK-------ALANVKITQAAIGGWHCLAVDDQGR 111
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIST- 141
+ WG NE+GQ G EE K E + ++ + V C T + T
Sbjct: 112 AYAWGGNEYGQCG---EEPLKD-EMGRPVRRDIVIPKRCAPKLTVRQVAAGGTHSVVLTR 167
Query: 142 -SRLWVWGQNQGSNFPRLFWGAFTPNTI--ICQVSCGSVHVVALSECGLLQAWGYNEYGQ 198
+W WGQ + + + ++ G+ H +AL E G L AWG NEYGQ
Sbjct: 168 EGHVWTWGQPWPPGDIKQISVPVRVQGLENVRLIAVGAFHNLALEEDGRLLAWGNNEYGQ 227
Query: 199 LGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVG 258
LG G T + P ++G LD+ + ++ G +HS A+++ GEVY WG G G
Sbjct: 228 LGTGDT-QPTSHPVPVQG----LDDLT----LVDIAAGGWHSTALTDKGEVYGWGRGEHG 278
Query: 259 QLGHCSLQSGDK--ELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLG 316
+LG L DK +++P++V L I V+CGG HS ALT G ++++G G+LG
Sbjct: 279 RLG---LGDNDKSSKMVPQKVNLLAEEDIIQVSCGGTHSVALTRDGRIFSFGRGDHGRLG 335
Query: 317 LGPQTRS---FSL---IPNESDTYFRNIPILVVPNGVQLVACGHSHTL 358
G + + L IP ++ + +ACG HTL
Sbjct: 336 YGRKVTTGQPLELPIKIPPPEGSFNHTDEEEEGKWSAKSIACGGRHTL 383
Score = 264 (98.0 bits), Expect = 9.7e-21, P = 9.7e-21
Identities = 95/344 (27%), Positives = 143/344 (41%)
Query: 21 SAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWL--DIACGHEHTAAVA 78
++I WG GQ G E K+ + C A + + G ++ A+
Sbjct: 5 TSIIAWGSGEDGQLGIGTNEE-----KE-----WACVVEALEPYSVRSVVSGSRNSLAIC 54
Query: 79 SDGTLFTWGANEFGQLGDGTEEGRKH-PEKVKQLQSEFVKSISCGA-HCTAAIAEPRE-- 134
DGT+FTWG N+ G LG E ++ P +VK L + + + G HC A + R
Sbjct: 55 DDGTMFTWGWNQRGTLGHQPETKTENIPSRVKALANVKITQAAIGGWHCLAVDDQGRAYA 114
Query: 135 ---ND-GTISTSRLWVWGQNQGSNFPR--LFWGAFTPNTIICQVSCGSVHVVALSECGLL 188
N+ G L G R + P + QV+ G H V L+ G +
Sbjct: 115 WGGNEYGQCGEEPL---KDEMGRPVRRDIVIPKRCAPKLTVRQVAAGGTHSVVLTREGHV 171
Query: 189 QAWGYN-EYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENG 247
WG G + + + P ++G LE + ++ G +H+ A+ E+G
Sbjct: 172 WTWGQPWPPGDIKQ------ISVPVRVQG----------LENVRLIAVGAFHNLALEEDG 215
Query: 248 EVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAW 307
+ WG GQLG Q P V LD + + D+A GG HS ALT KG +Y W
Sbjct: 216 RLLAWGNNEYGQLGTGDTQPTSH---PVPVQGLDDLTLVDIAAGGWHSTALTDKGEVYGW 272
Query: 308 GGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVA 351
G + G+LGLG +S ++P + + I V G VA
Sbjct: 273 GRGEHGRLGLGDNDKSSKMVPQKVNLLAEEDIIQVSCGGTHSVA 316
Score = 240 (89.5 bits), Expect = 8.3e-18, P = 8.3e-18
Identities = 52/150 (34%), Positives = 81/150 (54%)
Query: 227 LEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIK 286
LE + ++ G +H+ A+ E+G + WG GQLG Q P V LD + +
Sbjct: 195 LENVRLIAVGAFHNLALEEDGRLLAWGNNEYGQLGTGDTQPTSH---PVPVQGLDDLTLV 251
Query: 287 DVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNG 346
D+A GG HS ALT KG +Y WG + G+LGLG +S ++P + + +L +
Sbjct: 252 DIAAGGWHSTALTDKGEVYGWGRGEHGRLGLGDNDKSSKMVPQK-------VNLLAEEDI 304
Query: 347 VQLVACGHSHTLVYMRDGRIHGWGYNSYGQ 376
+Q V+CG +H++ RDGRI +G +G+
Sbjct: 305 IQ-VSCGGTHSVALTRDGRIFSFGRGDHGR 333
Score = 220 (82.5 bits), Expect = 1.8e-15, P = 1.8e-15
Identities = 66/183 (36%), Positives = 87/183 (47%)
Query: 190 AWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEV 249
AWG E GQLG G E K +A + EA E + V G +S A+ ++G +
Sbjct: 9 AWGSGEDGQLGIGTNEE--------KEWACVV-EALEPYSVRSVVSGSRNSLAICDDGTM 59
Query: 250 YTWGLGSVGQLGHCSLQSGDK-ELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWG 308
+TWG G LGH Q K E +P RV AL + I A GG H A+ +G YAWG
Sbjct: 60 FTWGWNQRGTLGH---QPETKTENIPSRVKALANVKITQAAIGGWHCLAVDDQGRAYAWG 116
Query: 309 GSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPN-GVQLVACGHSHTLVYMRDGRIH 367
G++ GQ G P P D IP P V+ VA G +H++V R+G +
Sbjct: 117 GNEYGQCGEEPLKDEMGR-PVRRDIV---IPKRCAPKLTVRQVAAGGTHSVVLTREGHVW 172
Query: 368 GWG 370
WG
Sbjct: 173 TWG 175
Score = 209 (78.6 bits), Expect = 3.3e-14, P = 3.3e-14
Identities = 85/306 (27%), Positives = 136/306 (44%)
Query: 24 YVWGYNHSGQTGRK------GR--ERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTA 75
Y WG N GQ G + GR R + IPK+ P+L R +A G H+
Sbjct: 113 YAWGGNEYGQCGEEPLKDEMGRPVRRDIVIPKRCAPKL-------TVR--QVAAGGTHSV 163
Query: 76 AVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREN 135
+ +G ++TWG G + P +V+ L++ V+ I+ GA A+ E
Sbjct: 164 VLTREGHVWTWGQ----PWPPGDIKQISVPVRVQGLEN--VRLIAVGAFHNLAL----EE 213
Query: 136 DGTISTSRLWVWGQN----------QGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSEC 185
DG RL WG N Q ++ P G + + ++ G H AL++
Sbjct: 214 DG-----RLLAWGNNEYGQLGTGDTQPTSHPVPVQGL--DDLTLVDIAAGGWHSTALTDK 266
Query: 186 GLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSE 245
G + WG E+G+LG G + + +++ L E E I QVSCG HS A++
Sbjct: 267 GEVYGWGRGEHGRLGLG---DNDKSSKMVPQKVNLLAE----EDIIQVSCGGTHSVALTR 319
Query: 246 NGEVYTWGLGSVGQLGHC-SLQSGDKELLPRRVVALDGIF------------IKDVACGG 292
+G ++++G G G+LG+ + +G LP ++ +G F K +ACGG
Sbjct: 320 DGRIFSFGRGDHGRLGYGRKVTTGQPLELPIKIPPPEGSFNHTDEEEEGKWSAKSIACGG 379
Query: 293 VHSCAL 298
H+ A+
Sbjct: 380 RHTLAI 385
Score = 199 (75.1 bits), Expect = 4.6e-13, P = 4.6e-13
Identities = 60/190 (31%), Positives = 84/190 (44%)
Query: 229 KITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVV----ALDGIF 284
KITQ + G +H AV + G Y WG GQ G L+ + R +V +
Sbjct: 92 KITQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPLKDEMGRPVRRDIVIPKRCAPKLT 151
Query: 285 IKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVP 344
++ VA GG HS LT +G ++ WG Q G + S +P + + +
Sbjct: 152 VRQVAAGGTHSVVLTREGHVWTWG--QPWPPG---DIKQIS-VP---------VRVQGLE 196
Query: 345 NGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAA 403
N V+L+A G H L DGR+ WG N YGQ + +P PV + +AA
Sbjct: 197 N-VRLIAVGAFHNLALEEDGRLLAWGNNEYGQLGTGDTQPTSHPVPVQGLDDLTLVDIAA 255
Query: 404 GGGHSAVLAD 413
GG HS L D
Sbjct: 256 GGWHSTALTD 265
Score = 190 (71.9 bits), Expect = 4.8e-12, P = 4.8e-12
Identities = 59/188 (31%), Positives = 86/188 (45%)
Query: 67 IACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCT 126
IA G H A+ DG L WG NE+GQLG G + HP V+ L + I+ G +
Sbjct: 201 IAVGAFHNLALEEDGRLLAWGNNEYGQLGTGDTQPTSHPVPVQGLDDLTLVDIAAGGWHS 260
Query: 127 AAIAEPRE--NDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSE 184
A+ + E G RL + ++ S II QVSCG H VAL+
Sbjct: 261 TALTDKGEVYGWGRGEHGRLGLGDNDKSSKMVPQKVNLLAEEDII-QVSCGGTHSVALTR 319
Query: 185 CGLLQAWGYNEYGQLGRG---ITCEGLQGPRVI---KGYAKFLDEAPELE-KITQVSCGE 237
G + ++G ++G+LG G T + L+ P I +G DE E + ++CG
Sbjct: 320 DGRIFSFGRGDHGRLGYGRKVTTGQPLELPIKIPPPEGSFNHTDEEEEGKWSAKSIACGG 379
Query: 238 YHSAAVSE 245
H+ A+ E
Sbjct: 380 RHTLAIVE 387
>UNIPROTKB|E1BKF7 [details] [associations]
symbol:RCBTB1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR000210
InterPro:IPR013069 Pfam:PF00651 PROSITE:PS50097 SMART:SM00225
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005737 Gene3D:3.30.710.10
InterPro:IPR011333 SUPFAM:SSF54695 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 GeneTree:ENSGT00700000104208 CTD:55213 KO:K11494
OMA:NCSNCLG EMBL:DAAA02032915 EMBL:DAAA02032914 IPI:IPI00826911
RefSeq:NP_001178141.1 UniGene:Bt.22187 Ensembl:ENSBTAT00000035796
GeneID:785222 KEGG:bta:785222 NextBio:20927167 Uniprot:E1BKF7
Length = 531
Score = 321 (118.1 bits), Expect = 2.9e-29, Sum P(2) = 2.9e-29
Identities = 96/305 (31%), Positives = 141/305 (46%)
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND 136
V +F +G N LG G P+K++ L + +KS+S G+ ++ D
Sbjct: 37 VTDSDEVFVFGLNYSSCLGTGDNHSTLVPKKLEALCGKKIKSLSYGSGPHVLLST---ED 93
Query: 137 GTISTSRLWVWGQN------QGSNFPRLFWGAFTPNTIICQV---SCGSVHVVALSECGL 187
G + + WG N G+ L N +I QV +CGS H +AL+ G
Sbjct: 94 GVV-----YAWGHNGYSQLGNGTTNQGLAPIQVCTNLLIKQVVEVACGSHHSMALAADGE 148
Query: 188 LQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENG 247
+ AWGYN GQ+G G T PR + ++++ ++CG+ S AV +NG
Sbjct: 149 VFAWGYNNCGQVGSGSTANQ-PTPRKVTNCL-------HIKRVVGIACGQTSSMAVLDNG 200
Query: 248 EVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAW 307
EVY WG GQLG L + +L P RV AL + + + CG H+ ALT +G LYAW
Sbjct: 201 EVYGWGYNGNGQLG---LGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAW 257
Query: 308 GGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGV-QLVACGHSHT-LVYMRDGR 365
G + GQLG G + S P I+V V ++ AC +HT + G
Sbjct: 258 GANTYGQLGTGNKNNLLS--PAH---------IMVEKERVIEIAACHSAHTSAAKTQGGH 306
Query: 366 IHGWG 370
++ WG
Sbjct: 307 VYMWG 311
Score = 264 (98.0 bits), Expect = 7.1e-22, Sum P(2) = 7.1e-22
Identities = 75/234 (32%), Positives = 110/234 (47%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+Y WG+N Q G G Q P Q+ C + +++ACG H+ A+A+DG
Sbjct: 96 VYAWGHNGYSQLGN-GTTNQGLAPIQV------CTNLLIKQVVEVACGSHHSMALAADGE 148
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQ-LQSEFVKSISCGAHCTAAIAEPRENDGTIST 141
+F WG N GQ+G G+ + P KV L + V I+CG + A+ + E G
Sbjct: 149 VFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGYN 208
Query: 142 SRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGR 201
+ N G+ + A + + Q+ CG H +AL++ GLL AWG N YGQLG
Sbjct: 209 GNGQLGLGNNGNQLTPVRVAALH-SVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGT 267
Query: 202 GITCEGLQGPRVIKGYAKFLDEAPELEKITQVS-CGEYH-SAAVSENGEVYTWG 253
G L P I E E++ +++ C H SAA ++ G VY WG
Sbjct: 268 G-NKNNLLSPAHIM---------VEKERVIEIAACHSAHTSAAKTQGGHVYMWG 311
Score = 232 (86.7 bits), Expect = 4.3e-18, Sum P(2) = 4.3e-18
Identities = 78/274 (28%), Positives = 117/274 (42%)
Query: 49 LPPELFGCPAGANSRWLDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKV 108
L P+ G + L G H DG ++ WG N + QLG+GT P +V
Sbjct: 63 LVPKKLEALCGKKIKSLSYGSG-PHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGLAPIQV 121
Query: 109 -KQLQSEFVKSISCGAHCTAAIAEPRENDGTISTSRLWVWGQNQ----GSNF------PR 157
L + V ++CG+H + A+A DG + + WG N GS PR
Sbjct: 122 CTNLLIKQVVEVACGSHHSMALAA----DGEV-----FAWGYNNCGQVGSGSTANQPTPR 172
Query: 158 LFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGY 217
++ ++CG +A+ + G + WGYN GQLG G L RV +
Sbjct: 173 KVTNCLHIKRVV-GIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGNNGNQLTPVRVAALH 231
Query: 218 AKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKE--LLPR 275
+ + Q+ CG H+ A+++ G +Y WG + GQLG +G+K L P
Sbjct: 232 SVC---------VNQIVCGYAHTLALTDEGLLYAWGANTYGQLG-----TGNKNNLLSPA 277
Query: 276 RVVALDGIFIKDVACGGVH-SCALTSKGALYAWG 308
++ I+ AC H S A T G +Y WG
Sbjct: 278 HIMVEKERVIEIAACHSAHTSAAKTQGGHVYMWG 311
Score = 221 (82.9 bits), Expect = 8.2e-17, Sum P(2) = 8.2e-17
Identities = 59/185 (31%), Positives = 91/185 (49%)
Query: 227 LEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVV-ALDGIFI 285
++++ +V+CG +HS A++ +GEV+ WG + GQ+G S + + PR+V L +
Sbjct: 127 IKQVVEVACGSHHSMALAADGEVFAWGYNNCGQVGSGSTAN---QPTPRKVTNCLHIKRV 183
Query: 286 KDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPN 345
+ACG S A+ G +Y WG + GQLGLG L P R + V
Sbjct: 184 VGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLG--NNGNQLTP------VRVAALHSVC- 234
Query: 346 GVQLVACGHSHTLVYMRDGRIHGWGYNSYGQ-AANEKSTYAWYPSPVDWCVGEVRKLAAG 404
V + CG++HTL +G ++ WG N+YGQ K+ SP V + R +
Sbjct: 235 -VNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGNKNNLL---SPAHIMVEKERVIEIA 290
Query: 405 GGHSA 409
HSA
Sbjct: 291 ACHSA 295
Score = 221 (82.9 bits), Expect = 8.2e-17, Sum P(2) = 8.2e-17
Identities = 74/267 (27%), Positives = 115/267 (43%)
Query: 6 IIGETARPVDNIPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWL 65
+ G +A + ++V+G N+S G G +PK+L E C G + L
Sbjct: 26 VFGTSANEALYVTDSDEVFVFGLNYSSCLGT-GDNHSTLVPKKL--EAL-C--GKKIKSL 79
Query: 66 DIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKV-KQLQSEFVKSISCGAH 124
G H DG ++ WG N + QLG+GT P +V L + V ++CG+H
Sbjct: 80 SYGSG-PHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGLAPIQVCTNLLIKQVVEVACGSH 138
Query: 125 CTAAIAEPRENDGTISTSRLWVWGQNQ----GSNF------PRLFWGAFTPNTIICQVSC 174
+ A+A DG + + WG N GS PR ++ ++C
Sbjct: 139 HSMALAA----DGEV-----FAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVV-GIAC 188
Query: 175 GSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVS 234
G +A+ + G + WGYN GQLG G L RV ++ + Q+
Sbjct: 189 GQTSSMAVLDNGEVYGWGYNGNGQLGLGNNGNQLTPVRVAALHSVC---------VNQIV 239
Query: 235 CGEYHSAAVSENGEVYTWGLGSVGQLG 261
CG H+ A+++ G +Y WG + GQLG
Sbjct: 240 CGYAHTLALTDEGLLYAWGANTYGQLG 266
Score = 176 (67.0 bits), Expect = 1.1e-11, Sum P(2) = 1.1e-11
Identities = 55/173 (31%), Positives = 85/173 (49%)
Query: 243 VSENGEVYTWGLGSVGQLGHCSLQSGDKE--LLPRRVVALDGIFIKDVACG-GVHSCALT 299
V+++ EV+ +GL LG +GD L+P+++ AL G IK ++ G G H T
Sbjct: 37 VTDSDEVFVFGLNYSSCLG-----TGDNHSTLVPKKLEALCGKKIKSLSYGSGPHVLLST 91
Query: 300 SKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLV 359
G +YAWG + QLG G T + L P + T N L++ V+ VACG H++
Sbjct: 92 EDGVVYAWGHNGYSQLGNG--TTNQGLAPIQVCT---N---LLIKQVVE-VACGSHHSMA 142
Query: 360 YMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLA 412
DG + WGYN+ GQ + + P V C+ R + G ++ +A
Sbjct: 143 LAADGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVGIACGQTSSMA 195
Score = 162 (62.1 bits), Expect = 4.0e-10, Sum P(2) = 4.0e-10
Identities = 45/151 (29%), Positives = 69/151 (45%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+Y WGYN +GQ G QL P ++ C N I CG+ HT A+ +G
Sbjct: 202 VYGWGYNGNGQLGLGNNGNQLT-PVRVAALHSVC---VNQ----IVCGYAHTLALTDEGL 253
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISC-GAHCTAAIAEPRENDGTIST 141
L+ WGAN +GQLG G + P + + ++ +C AH +AA + G
Sbjct: 254 LYAWGANTYGQLGTGNKNNLLSPAHIMVEKERVIEIAACHSAHTSAA-----KTQG---- 304
Query: 142 SRLWVWGQNQGSN--FPRLFWGAFTPNTIIC 170
+++WGQ +G + P L + T + C
Sbjct: 305 GHVYMWGQCRGQSVTLPHLTHLSSTDDVFAC 335
Score = 152 (58.6 bits), Expect = 5.1e-09, Sum P(2) = 5.1e-09
Identities = 54/181 (29%), Positives = 77/181 (42%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
+ A ++ WGYN+ GQ G Q P P ++ C R + IACG + A
Sbjct: 143 LAADGEVFAWGYNNCGQVGSGSTANQ---PT--PRKVTNCLH--IKRVVGIACGQTSSMA 195
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCG-AHCTAAIAEPREN 135
V +G ++ WG N GQLG G + P +V L S V I CG AH T A+ +
Sbjct: 196 VLDNGEVYGWGYNGNGQLGLGNNGNQLTPVRVAALHSVCVNQIVCGYAH-TLALTD---- 250
Query: 136 DGTISTSRLWVWGQNQGSNFPRLFWGAFT---PNTIICQVSCGSVHV-VALSECGLLQAW 191
+G + +GQ N L A +I +C S H A ++ G + W
Sbjct: 251 EGLLYAWGANTYGQLGTGNKNNLLSPAHIMVEKERVIEIAACHSAHTSAAKTQGGHVYMW 310
Query: 192 G 192
G
Sbjct: 311 G 311
Score = 58 (25.5 bits), Expect = 2.9e-29, Sum P(2) = 2.9e-29
Identities = 12/37 (32%), Positives = 19/37 (51%)
Query: 417 LKELCEFRLAESVTLSNASEIEDVASRTGSEALARLC 453
LK+LC+ + +T+ NA + A R +E L C
Sbjct: 455 LKKLCQHIIKRGITVENAFSLFSAAVRYDAEDLEEFC 491
>UNIPROTKB|F1PV11 [details] [associations]
symbol:RCBTB1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR000210 InterPro:IPR013069 Pfam:PF00651 PROSITE:PS50097
SMART:SM00225 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005737
Gene3D:3.30.710.10 InterPro:IPR011333 SUPFAM:SSF54695
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012
GeneTree:ENSGT00700000104208 CTD:55213 KO:K11494 OMA:NCSNCLG
EMBL:AAEX03013105 RefSeq:XP_542558.2 Ensembl:ENSCAFT00000006979
GeneID:485440 KEGG:cfa:485440 Uniprot:F1PV11
Length = 531
Score = 321 (118.1 bits), Expect = 6.0e-29, Sum P(2) = 6.0e-29
Identities = 96/305 (31%), Positives = 142/305 (46%)
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND 136
V + +F +G N LG G + P+K++ L + +KS+S G+ ++ D
Sbjct: 37 VTDNDEVFVFGLNYSNCLGTGDNQSTLVPKKLEALCGKKIKSLSYGSGPHVLLST---ED 93
Query: 137 GTISTSRLWVWGQNQGSNFPRLFWG-AFTP-----NTIICQV---SCGSVHVVALSECGL 187
G + + WG N S P N +I QV +CGS H +AL+ G
Sbjct: 94 GVV-----YAWGHNGYSQLGNGTTNQGIAPIQVCTNLLIKQVVEVACGSHHSMALAADGE 148
Query: 188 LQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENG 247
+ AWGYN GQ+G G T PR + ++++ ++CG+ S AV +NG
Sbjct: 149 VFAWGYNNCGQVGSGSTTNQ-PTPRKVTNCL-------HIKRVVGIACGQTSSMAVLDNG 200
Query: 248 EVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAW 307
EVY WG GQLG L + +L P RV AL + + + CG H+ ALT +G LYAW
Sbjct: 201 EVYGWGYNGNGQLG---LGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAW 257
Query: 308 GGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGV-QLVACGHSHT-LVYMRDGR 365
G + GQLG G + S P I+V V ++ AC +HT + G
Sbjct: 258 GANTYGQLGTGNKNNLLS--PAH---------IMVEKERVVEIAACHSAHTSAAKTQGGH 306
Query: 366 IHGWG 370
++ WG
Sbjct: 307 VYMWG 311
Score = 264 (98.0 bits), Expect = 1.5e-21, Sum P(2) = 1.5e-21
Identities = 75/234 (32%), Positives = 110/234 (47%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+Y WG+N Q G G Q P Q+ C + +++ACG H+ A+A+DG
Sbjct: 96 VYAWGHNGYSQLGN-GTTNQGIAPIQV------CTNLLIKQVVEVACGSHHSMALAADGE 148
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQ-LQSEFVKSISCGAHCTAAIAEPRENDGTIST 141
+F WG N GQ+G G+ + P KV L + V I+CG + A+ + E G
Sbjct: 149 VFAWGYNNCGQVGSGSTTNQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGYN 208
Query: 142 SRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGR 201
+ N G+ + A + + Q+ CG H +AL++ GLL AWG N YGQLG
Sbjct: 209 GNGQLGLGNNGNQLTPVRVAALH-SVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGT 267
Query: 202 GITCEGLQGPRVIKGYAKFLDEAPELEKITQVS-CGEYH-SAAVSENGEVYTWG 253
G L P I E E++ +++ C H SAA ++ G VY WG
Sbjct: 268 G-NKNNLLSPAHIM---------VEKERVVEIAACHSAHTSAAKTQGGHVYMWG 311
Score = 236 (88.1 bits), Expect = 3.1e-18, Sum P(2) = 3.1e-18
Identities = 82/291 (28%), Positives = 124/291 (42%)
Query: 49 LPPELFGCPAGANSRWLDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKV 108
L P+ G + L G H DG ++ WG N + QLG+GT P +V
Sbjct: 63 LVPKKLEALCGKKIKSLSYGSG-PHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPIQV 121
Query: 109 -KQLQSEFVKSISCGAHCTAAIAEPRENDGTISTSRLWVWGQNQ----GSNF------PR 157
L + V ++CG+H + A+A DG + + WG N GS PR
Sbjct: 122 CTNLLIKQVVEVACGSHHSMALAA----DGEV-----FAWGYNNCGQVGSGSTTNQPTPR 172
Query: 158 LFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGY 217
++ ++CG +A+ + G + WGYN GQLG G L RV +
Sbjct: 173 KVTNCLHIKRVV-GIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGNNGNQLTPVRVAALH 231
Query: 218 AKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKE--LLPR 275
+ + Q+ CG H+ A+++ G +Y WG + GQLG +G+K L P
Sbjct: 232 SVC---------VNQIVCGYAHTLALTDEGLLYAWGANTYGQLG-----TGNKNNLLSPA 277
Query: 276 RVVALDGIFIKDVACGGVH-SCALTSKGALYAWGGSQAGQLGLGPQTRSFS 325
++ ++ AC H S A T G +Y WG + GQ + P FS
Sbjct: 278 HIMVEKERVVEIAACHSAHTSAAKTQGGHVYMWGQCR-GQSVVLPHLTHFS 327
Score = 221 (82.9 bits), Expect = 1.7e-16, Sum P(2) = 1.7e-16
Identities = 74/267 (27%), Positives = 116/267 (43%)
Query: 6 IIGETARPVDNIPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWL 65
+ G +A + ++V+G N+S G G + +PK+L E C G + L
Sbjct: 26 VFGTSANEALYVTDNDEVFVFGLNYSNCLGT-GDNQSTLVPKKL--EAL-C--GKKIKSL 79
Query: 66 DIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKV-KQLQSEFVKSISCGAH 124
G H DG ++ WG N + QLG+GT P +V L + V ++CG+H
Sbjct: 80 SYGSG-PHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPIQVCTNLLIKQVVEVACGSH 138
Query: 125 CTAAIAEPRENDGTISTSRLWVWGQNQ----GSNF------PRLFWGAFTPNTIICQVSC 174
+ A+A DG + + WG N GS PR ++ ++C
Sbjct: 139 HSMALAA----DGEV-----FAWGYNNCGQVGSGSTTNQPTPRKVTNCLHIKRVV-GIAC 188
Query: 175 GSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVS 234
G +A+ + G + WGYN GQLG G L RV ++ + Q+
Sbjct: 189 GQTSSMAVLDNGEVYGWGYNGNGQLGLGNNGNQLTPVRVAALHSVC---------VNQIV 239
Query: 235 CGEYHSAAVSENGEVYTWGLGSVGQLG 261
CG H+ A+++ G +Y WG + GQLG
Sbjct: 240 CGYAHTLALTDEGLLYAWGANTYGQLG 266
Score = 220 (82.5 bits), Expect = 2.2e-16, Sum P(2) = 2.2e-16
Identities = 59/185 (31%), Positives = 91/185 (49%)
Query: 227 LEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVV-ALDGIFI 285
++++ +V+CG +HS A++ +GEV+ WG + GQ+G S + + PR+V L +
Sbjct: 127 IKQVVEVACGSHHSMALAADGEVFAWGYNNCGQVGSGSTTN---QPTPRKVTNCLHIKRV 183
Query: 286 KDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPN 345
+ACG S A+ G +Y WG + GQLGLG L P R + V
Sbjct: 184 VGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLG--NNGNQLTP------VRVAALHSVC- 234
Query: 346 GVQLVACGHSHTLVYMRDGRIHGWGYNSYGQ-AANEKSTYAWYPSPVDWCVGEVRKLAAG 404
V + CG++HTL +G ++ WG N+YGQ K+ SP V + R +
Sbjct: 235 -VNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGNKNNLL---SPAHIMVEKERVVEIA 290
Query: 405 GGHSA 409
HSA
Sbjct: 291 ACHSA 295
Score = 187 (70.9 bits), Expect = 1.3e-12, Sum P(2) = 1.3e-12
Identities = 56/173 (32%), Positives = 88/173 (50%)
Query: 243 VSENGEVYTWGLGSVGQLGHCSLQSGDKE--LLPRRVVALDGIFIKDVACG-GVHSCALT 299
V++N EV+ +GL +C L +GD + L+P+++ AL G IK ++ G G H T
Sbjct: 37 VTDNDEVFVFGLN----YSNC-LGTGDNQSTLVPKKLEALCGKKIKSLSYGSGPHVLLST 91
Query: 300 SKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLV 359
G +YAWG + QLG G T + + P + T N L++ V+ VACG H++
Sbjct: 92 EDGVVYAWGHNGYSQLGNG--TTNQGIAPIQVCT---N---LLIKQVVE-VACGSHHSMA 142
Query: 360 YMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLA 412
DG + WGYN+ GQ + +T P V C+ R + G ++ +A
Sbjct: 143 LAADGEVFAWGYNNCGQVGSGSTTNQPTPRKVTNCLHIKRVVGIACGQTSSMA 195
Score = 164 (62.8 bits), Expect = 4.9e-10, Sum P(2) = 4.9e-10
Identities = 46/151 (30%), Positives = 69/151 (45%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+Y WGYN +GQ G QL P ++ C N I CG+ HT A+ +G
Sbjct: 202 VYGWGYNGNGQLGLGNNGNQLT-PVRVAALHSVC---VNQ----IVCGYAHTLALTDEGL 253
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISC-GAHCTAAIAEPRENDGTIST 141
L+ WGAN +GQLG G + P + + V+ +C AH +AA + G
Sbjct: 254 LYAWGANTYGQLGTGNKNNLLSPAHIMVEKERVVEIAACHSAHTSAA-----KTQG---- 304
Query: 142 SRLWVWGQNQGSN--FPRLFWGAFTPNTIIC 170
+++WGQ +G + P L + T + C
Sbjct: 305 GHVYMWGQCRGQSVVLPHLTHFSCTDDVFAC 335
Score = 151 (58.2 bits), Expect = 1.4e-08, Sum P(2) = 1.4e-08
Identities = 53/181 (29%), Positives = 77/181 (42%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
+ A ++ WGYN+ GQ G Q P P ++ C R + IACG + A
Sbjct: 143 LAADGEVFAWGYNNCGQVGSGSTTNQ---PT--PRKVTNCLH--IKRVVGIACGQTSSMA 195
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCG-AHCTAAIAEPREN 135
V +G ++ WG N GQLG G + P +V L S V I CG AH T A+ +
Sbjct: 196 VLDNGEVYGWGYNGNGQLGLGNNGNQLTPVRVAALHSVCVNQIVCGYAH-TLALTD---- 250
Query: 136 DGTISTSRLWVWGQNQGSNFPRLFWGAFT---PNTIICQVSCGSVHV-VALSECGLLQAW 191
+G + +GQ N L A ++ +C S H A ++ G + W
Sbjct: 251 EGLLYAWGANTYGQLGTGNKNNLLSPAHIMVEKERVVEIAACHSAHTSAAKTQGGHVYMW 310
Query: 192 G 192
G
Sbjct: 311 G 311
Score = 55 (24.4 bits), Expect = 6.0e-29, Sum P(2) = 6.0e-29
Identities = 11/37 (29%), Positives = 19/37 (51%)
Query: 417 LKELCEFRLAESVTLSNASEIEDVASRTGSEALARLC 453
L++LC+ + +T+ NA + A R +E L C
Sbjct: 455 LRKLCQHIIKRGITVENAFSLFSAAVRYDAEDLEEFC 491
>RGD|1307989 [details] [associations]
symbol:Herc2 "HECT and RLD domain containing E3 ubiquitin
protein ligase 2" species:10116 "Rattus norvegicus" [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISO;IBA] [GO:0005634
"nucleus" evidence=ISO;IBA] [GO:0005737 "cytoplasm"
evidence=ISO;IBA] [GO:0005743 "mitochondrial inner membrane"
evidence=ISO] [GO:0006281 "DNA repair" evidence=ISO] [GO:0006974
"response to DNA damage stimulus" evidence=ISO] [GO:0007283
"spermatogenesis" evidence=ISO] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=ISO]
[GO:0020037 "heme binding" evidence=IEA] [GO:0031625 "ubiquitin
protein ligase binding" evidence=ISO] [GO:0032183 "SUMO binding"
evidence=ISO] [GO:0042787 "protein ubiquitination involved in
ubiquitin-dependent protein catabolic process" evidence=IBA]
Pfam:PF00632 InterPro:IPR000433 InterPro:IPR000569
InterPro:IPR001199 InterPro:IPR010606 Pfam:PF00173 Pfam:PF00569
Pfam:PF06701 PROSITE:PS01357 PROSITE:PS50135 PROSITE:PS50237
PROSITE:PS50255 PROSITE:PS51416 SMART:SM00119 SMART:SM00291
RGD:1307989 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005634
GO:GO:0005737 GO:GO:0046872 GO:GO:0008270 GO:GO:0020037
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
Gene3D:3.10.120.10 SUPFAM:SSF55856 InterPro:IPR008979
SUPFAM:SSF49785 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 InterPro:IPR004939 Pfam:PF03256 PROSITE:PS51284
GO:GO:0042787 Gene3D:2.30.30.30 InterPro:IPR021097
InterPro:IPR014722 Pfam:PF11515 SUPFAM:SSF56204 InterPro:IPR006624
SMART:SM00706 IPI:IPI00476523 Ensembl:ENSRNOT00000019318
UCSC:RGD:1307989 ArrayExpress:F1M716 Uniprot:F1M716
Length = 3607
Score = 312 (114.9 bits), Expect = 8.4e-23, Sum P(3) = 8.4e-23
Identities = 90/284 (31%), Positives = 135/284 (47%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ WG G G+ G ++ K P L A R DIACG H+AA+ S G
Sbjct: 1877 VFSWG---EGDDGKLGHFSRMNCDK---PRLI--EALKTKRIRDIACGSSHSAALTSSGE 1928
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREN------D 136
L+TWG E+G+LG G + P+ VK L V ++CG+ +A E D
Sbjct: 1929 LYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGD 1988
Query: 137 GTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEY 196
G +L G ++G N P+ +CQ+ CG+ +AL++ G++ WG +Y
Sbjct: 1989 GDFG--KLGRGG-SEGCNIPQNIERLNGQG--VCQIECGAQFSLALTKSGVVWTWGKGDY 2043
Query: 197 GQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGS 256
+LG G ++ P+V++G +KI V+ G H AV+++G+VY WG
Sbjct: 2044 FRLGHGSDVH-VRKPQVVEGLRG--------KKIVHVAVGALHCLAVTDSGQVYAWGDND 2094
Query: 257 VGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTS 300
GQ G+ + K P V L+G I VACG HS A T+
Sbjct: 2095 HGQQGNGTTTVNRK---PTLVQGLEGQKITRVACGSSHSVAWTT 2135
Score = 303 (111.7 bits), Expect = 9.1e-22, Sum P(2) = 9.1e-22
Identities = 90/296 (30%), Positives = 137/296 (46%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
+ ++ +Y WG G+ G R R P+ + L G +D+A G H+A
Sbjct: 2828 LSSEGEVYSWGEAEDGKLGHGNRSPCDR-PRVIE-SLRGIEV------VDVAAGGAHSAC 2879
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND 136
V + G L+TWG +G+LG E + P+ V+ LQ V I+CG+ + +D
Sbjct: 2880 VTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLC--LTDD 2937
Query: 137 GTISTSRLWVWGQNQGSNFPRLFW-GAFTPNTI-------ICQVSCGSVHVVALSECGLL 188
T+ W WG R G P I + +V CGS VAL++ G +
Sbjct: 2938 DTV-----WSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAV 2992
Query: 189 QAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGE 248
WG +Y +LG G + + ++ PR ++G + +K+ ++ G H +E+GE
Sbjct: 2993 YTWGKGDYHRLGHG-SDDHVRRPRQVQGL--------QGKKVIAIATGSLHCVCCTEDGE 3043
Query: 249 VYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCAL-TSKGA 303
VYTWG GQLG + + + PR V AL G + VACG H+ A TSK A
Sbjct: 3044 VYTWGDNDEGQLGDGTTNAIQR---PRLVAALQGKKVNRVACGSAHTLAWSTSKPA 3096
Score = 300 (110.7 bits), Expect = 3.1e-21, Sum P(3) = 3.1e-21
Identities = 84/258 (32%), Positives = 133/258 (51%)
Query: 70 GHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAI 129
G H A+ DG +F+WG + G+LG + P ++ L+++ ++ I+CG+ +AA+
Sbjct: 1864 GGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAL 1923
Query: 130 AEPRENDGTISTSRLWVWGQ-NQGSNFPRL---FWGAFTPNTIICQVSCGS--VHVVALS 183
+ G + T L +G+ G N +L + +I QV+CGS +AL+
Sbjct: 1924 T----SSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVI-QVACGSRDAQTLALT 1978
Query: 184 ECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAV 243
+ GL+ +WG ++G+LGRG + EG P+ I E + + Q+ CG S A+
Sbjct: 1979 DEGLVFSWGDGDFGKLGRGGS-EGCNIPQNI--------ERLNGQGVCQIECGAQFSLAL 2029
Query: 244 SENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGA 303
+++G V+TWG G +LGH S K P+ V L G I VA G +H A+T G
Sbjct: 2030 TKSGVVWTWGKGDYFRLGHGSDVHVRK---PQVVEGLRGKKIVHVAVGALHCLAVTDSGQ 2086
Query: 304 LYAWGGSQAGQLGLGPQT 321
+YAWG + GQ G G T
Sbjct: 2087 VYAWGDNDHGQQGNGTTT 2104
Score = 298 (110.0 bits), Expect = 3.7e-21, Sum P(2) = 3.7e-21
Identities = 105/407 (25%), Positives = 177/407 (43%)
Query: 12 RPVD-NIPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACG 70
RP D + A + ++G+ H+ + G+ G ++ P C A A R + + G
Sbjct: 2714 RPDDWTLSAGGSGTIYGWGHNHR-GQLGGIEGAKVKVPTP-----CEALATLRPVQLIGG 2767
Query: 71 HEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSI---SCGAHCTA 127
+ AV +DG L+ G G+LG G E P ++ +Q F+K + S G HC A
Sbjct: 2768 EQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLA 2827
Query: 128 AIAEPREND-GTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECG 186
+E G +L G + PR+ + V+ G H ++ G
Sbjct: 2828 LSSEGEVYSWGEAEDGKLG-HGNRSPCDRPRVIESL--RGIEVVDVAAGGAHSACVTAAG 2884
Query: 187 LLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCG--EYHSAAVS 244
L WG YG+LG + + L+ P+++ EA + ++ ++CG + + ++
Sbjct: 2885 DLYTWGKGRYGRLGHSDSEDQLK-PKLV--------EALQGHRVIDIACGSGDAQTLCLT 2935
Query: 245 ENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGAL 304
++ V++WG G G+LG G K +P ++ +L G+ + V CG S ALT GA+
Sbjct: 2936 DDDTVWSWGDGDYGKLGRGG-SDGCK--VPMKIDSLTGLGVVKVECGSQFSVALTKSGAV 2992
Query: 305 YAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVAC--GHSHTLVYMR 362
Y WG +LG G SD + R + G +++A G H +
Sbjct: 2993 YTWGKGDYHRLGHG------------SDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTE 3040
Query: 363 DGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHS 408
DG ++ WG N GQ + + P V G+ V ++A G H+
Sbjct: 3041 DGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHT 3087
Score = 267 (99.0 bits), Expect = 1.6e-17, Sum P(2) = 1.6e-17
Identities = 88/289 (30%), Positives = 143/289 (49%)
Query: 134 ENDGTISTSRLWVWGQNQ-----GSNFPRLFWGAF--TPNTI-ICQVSCGSVHVVALSEC 185
E+ TI T +++VWG N G ++ +F T + + + QV+ GS + A++
Sbjct: 1761 ESTATIRT-KVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVE 1819
Query: 186 GLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSE 245
G + + G G+LG G++ + PR I + ++ ++K+ V G H+ A++
Sbjct: 1820 GKVYSCGEATNGRLGLGMSSGTVPIPRQITALSSYV-----VKKVA-VHSGGRHATALTV 1873
Query: 246 NGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALY 305
+G+V++WG G G+LGH S + DK PR + AL I+D+ACG HS ALTS G LY
Sbjct: 1874 DGKVFSWGEGDDGKLGHFSRMNCDK---PRLIEALKTKRIRDIACGSSHSAALTSSGELY 1930
Query: 306 AWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGH--SHTLVYMRD 363
WG + G+LG G T L P + + +L+ +Q VACG + TL +
Sbjct: 1931 TWGLGEYGRLGHGDNTTQ--LKP-------KMVKVLLGHRVIQ-VACGSRDAQTLALTDE 1980
Query: 364 GRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVL 411
G + WG +G+ S P ++ G+ V ++ G S L
Sbjct: 1981 GLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLAL 2029
Score = 266 (98.7 bits), Expect = 4.3e-17, Sum P(3) = 4.3e-17
Identities = 87/307 (28%), Positives = 143/307 (46%)
Query: 20 KSAIYVWGYNHSGQTGR-KGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVA 78
++ ++VWG N Q G KG + +++P F A + + +A G + AV
Sbjct: 1767 RTKVFVWGLNDKDQLGGLKGSK--IKVPS------FSETLSALNV-VQVAGGSKSLFAVT 1817
Query: 79 SDGTLFTWGANEFGQLGDGTEEGRKH-PEKVKQLQSEFVKSI---SCGAHCTAAIAEPRE 134
+G +++ G G+LG G G P ++ L S VK + S G H TA + +
Sbjct: 1818 VEGKVYSCGEATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKV 1877
Query: 135 ND-GTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGY 193
G +L + + + PRL T I ++CGS H AL+ G L WG
Sbjct: 1878 FSWGEGDDGKLGHFSR-MNCDKPRLIEALKTKR--IRDIACGSSHSAALTSSGELYTWGL 1934
Query: 194 NEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCG--EYHSAAVSENGEVYT 251
EYG+LG G L+ P+++K L ++ QV+CG + + A+++ G V++
Sbjct: 1935 GEYGRLGHGDNTTQLK-PKMVK---VLLGH-----RVIQVACGSRDAQTLALTDEGLVFS 1985
Query: 252 WGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQ 311
WG G G+LG + + +P+ + L+G + + CG S ALT G ++ WG
Sbjct: 1986 WGDGDFGKLGRGGSEGCN---IPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGD 2042
Query: 312 AGQLGLG 318
+LG G
Sbjct: 2043 YFRLGHG 2049
Score = 249 (92.7 bits), Expect = 8.5e-29, Sum P(3) = 8.5e-29
Identities = 71/238 (29%), Positives = 115/238 (48%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHE--HT 74
+ + +Y WG G+ G QL+ PK + L G R + +ACG T
Sbjct: 1923 LTSSGELYTWGLGEYGRLGHGDNTTQLK-PKMVKV-LLG------HRVIQVACGSRDAQT 1974
Query: 75 AAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRE 134
A+ +G +F+WG +FG+LG G EG P+ +++L + V I CGA + A+ +
Sbjct: 1975 LALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTK--- 2031
Query: 135 NDGTISTSRLWVWGQNQ------GSNF----PRLFWGAFTPNTIICQVSCGSVHVVALSE 184
G + W WG+ GS+ P++ G I V+ G++H +A+++
Sbjct: 2032 -SGVV-----WTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKK--IVHVAVGALHCLAVTD 2083
Query: 185 CGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAA 242
G + AWG N++GQ G G T + P +++G E +KIT+V+CG HS A
Sbjct: 2084 SGQVYAWGDNDHGQQGNGTTTVNRK-PTLVQGL--------EGQKITRVACGSSHSVA 2132
Score = 231 (86.4 bits), Expect = 1.8e-13, Sum P(2) = 1.8e-13
Identities = 78/247 (31%), Positives = 113/247 (45%)
Query: 171 QVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKI 230
Q+ G + A++ G L A GY G+LG G T E + P +++ ++K+
Sbjct: 2763 QLIGGEQTLFAVTADGKLYATGYGAGGRLGIGGT-ESVSTPTLLESIQHVF-----IKKV 2816
Query: 231 TQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVAC 290
V+ G H A+S GEVY+WG G+LGH + D+ PR + +L GI + DVA
Sbjct: 2817 A-VNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDR---PRVIESLRGIEVVDVAA 2872
Query: 291 GGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVP-NGVQL 349
GG HS +T+ G LY WG + G+LG SD+ + P LV G ++
Sbjct: 2873 GGAHSACVTAAGDLYTWGKGRYGRLG-------------HSDSEDQLKPKLVEALQGHRV 2919
Query: 350 V--ACGH--SHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAG 404
+ ACG + TL D + WG YG+ S P +D G V K+ G
Sbjct: 2920 IDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECG 2979
Query: 405 GGHSAVL 411
S L
Sbjct: 2980 SQFSVAL 2986
Score = 196 (74.1 bits), Expect = 1.3e-09, Sum P(2) = 1.3e-09
Identities = 52/185 (28%), Positives = 89/185 (48%)
Query: 229 KITQVSCG--EYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIK 286
++ QV+CG + + A+++ G V++WG G G+LG + + +P+ + L+G +
Sbjct: 1961 RVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCN---IPQNIERLNGQGVC 2017
Query: 287 DVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNG 346
+ CG S ALT G ++ WG +LG G SD + R ++ G
Sbjct: 2018 QIECGAQFSLALTKSGVVWTWGKGDYFRLGHG------------SDVHVRKPQVVEGLRG 2065
Query: 347 VQLV--ACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAA 403
++V A G H L G+++ WG N +GQ N +T P+ V G+ + ++A
Sbjct: 2066 KKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVAC 2125
Query: 404 GGGHS 408
G HS
Sbjct: 2126 GSSHS 2130
Score = 176 (67.0 bits), Expect = 8.5e-29, Sum P(3) = 8.5e-29
Identities = 47/131 (35%), Positives = 64/131 (48%)
Query: 230 ITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVA 289
+ +V CG S A++++G VYTWG G +LGH S D PR+V L G + +A
Sbjct: 2973 VVKVECGSQFSVALTKSGAVYTWGKGDYHRLGH---GSDDHVRRPRQVQGLQGKKVIAIA 3029
Query: 290 CGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQL 349
G +H T G +Y WG + GQLG G T + P R + L V
Sbjct: 3030 TGSLHCVCCTEDGEVYTWGDNDEGQLGDGT-TNAIQR-P-------RLVAALQGKK-VNR 3079
Query: 350 VACGHSHTLVY 360
VACG +HTL +
Sbjct: 3080 VACGSAHTLAW 3090
Score = 166 (63.5 bits), Expect = 5.7e-06, Sum P(3) = 5.7e-06
Identities = 45/131 (34%), Positives = 64/131 (48%)
Query: 230 ITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVA 289
+ Q+ CG S A++++G V+TWG G +LGH S K P+ V L G I VA
Sbjct: 2016 VCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRK---PQVVEGLRGKKIVHVA 2072
Query: 290 CGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQL 349
G +H A+T G +YAWG + GQ G G T N T + + +
Sbjct: 2073 VGALHCLAVTDSGQVYAWGDNDHGQQGNGTTT------VNRKPTLVQGLE----GQKITR 2122
Query: 350 VACGHSHTLVY 360
VACG SH++ +
Sbjct: 2123 VACGSSHSVAW 2133
Score = 135 (52.6 bits), Expect = 1.5e-24, Sum P(3) = 1.5e-24
Identities = 51/173 (29%), Positives = 74/173 (42%)
Query: 246 NGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALY 305
+G +Y WG GQLG G K +P AL + + G A+T+ G LY
Sbjct: 2725 SGTIYGWGHNHRGQLGGIE---GAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLY 2781
Query: 306 AWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGR 365
A G G+LG+G T S S + T +I + + V G H L +G
Sbjct: 2782 ATGYGAGGRLGIGG-TESVS-----TPTLLESIQHVFIKKVA--VNSGGKHCLALSSEGE 2833
Query: 366 IHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLADACSL 417
++ WG G+ + + P ++ G EV +AAGG HSA + A L
Sbjct: 2834 VYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDL 2886
Score = 43 (20.2 bits), Expect = 8.4e-23, Sum P(3) = 8.4e-23
Identities = 5/12 (41%), Positives = 10/12 (83%)
Query: 360 YMRDGRIHGWGY 371
++ DG ++GWG+
Sbjct: 2465 FISDGSVNGWGW 2476
Score = 43 (20.2 bits), Expect = 4.1e-15, Sum P(3) = 4.1e-15
Identities = 20/47 (42%), Positives = 23/47 (48%)
Query: 253 GLGSV-GQL-GHCSLQSGDKELLPRRV--VALDGIFIKDVACGGVHS 295
G SV GQ+ S S D LLP RV V G + D CGG +S
Sbjct: 3213 GTKSVFGQMCAKMSSFSPDSLLLPHRVWKVKFVGESVDD--CGGGYS 3257
Score = 37 (18.1 bits), Expect = 8.5e-29, Sum P(3) = 8.5e-29
Identities = 6/12 (50%), Positives = 9/12 (75%)
Query: 404 GGGHSAVLADAC 415
GGG+S +A+ C
Sbjct: 3253 GGGYSESIAEIC 3264
Score = 37 (18.1 bits), Expect = 8.5e-29, Sum P(3) = 8.5e-29
Identities = 6/12 (50%), Positives = 10/12 (83%)
Query: 446 SEALARLCERLR 457
SE++A +CE L+
Sbjct: 3257 SESIAEICEELQ 3268
>UNIPROTKB|F1M560 [details] [associations]
symbol:Herc2 "Protein Herc2" species:10116 "Rattus
norvegicus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0020037 "heme binding"
evidence=IEA] Pfam:PF00632 InterPro:IPR000433 InterPro:IPR000569
InterPro:IPR001199 InterPro:IPR010606 Pfam:PF00173 Pfam:PF00569
Pfam:PF06701 PROSITE:PS01357 PROSITE:PS50135 PROSITE:PS50237
PROSITE:PS50255 PROSITE:PS51416 SMART:SM00119 SMART:SM00291
RGD:1307989 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0046872
GO:GO:0008270 GO:GO:0020037 GO:GO:0005622 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 Gene3D:3.10.120.10
SUPFAM:SSF55856 InterPro:IPR008979 SUPFAM:SSF49785 GO:GO:0004842
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 InterPro:IPR004939
Pfam:PF03256 PROSITE:PS51284 Gene3D:2.30.30.30 InterPro:IPR021097
InterPro:IPR014722 Pfam:PF11515 SUPFAM:SSF56204 InterPro:IPR006624
SMART:SM00706 IPI:IPI00779702 Ensembl:ENSRNOT00000055965
ArrayExpress:F1M560 Uniprot:F1M560
Length = 3643
Score = 312 (114.9 bits), Expect = 8.6e-23, Sum P(3) = 8.6e-23
Identities = 90/284 (31%), Positives = 135/284 (47%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ WG G G+ G ++ K P L A R DIACG H+AA+ S G
Sbjct: 1877 VFSWG---EGDDGKLGHFSRMNCDK---PRLI--EALKTKRIRDIACGSSHSAALTSSGE 1928
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREN------D 136
L+TWG E+G+LG G + P+ VK L V ++CG+ +A E D
Sbjct: 1929 LYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGD 1988
Query: 137 GTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEY 196
G +L G ++G N P+ +CQ+ CG+ +AL++ G++ WG +Y
Sbjct: 1989 GDFG--KLGRGG-SEGCNIPQNIERLNGQG--VCQIECGAQFSLALTKSGVVWTWGKGDY 2043
Query: 197 GQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGS 256
+LG G ++ P+V++G +KI V+ G H AV+++G+VY WG
Sbjct: 2044 FRLGHGSDVH-VRKPQVVEGLRG--------KKIVHVAVGALHCLAVTDSGQVYAWGDND 2094
Query: 257 VGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTS 300
GQ G+ + K P V L+G I VACG HS A T+
Sbjct: 2095 HGQQGNGTTTVNRK---PTLVQGLEGQKITRVACGSSHSVAWTT 2135
Score = 303 (111.7 bits), Expect = 9.3e-22, Sum P(2) = 9.3e-22
Identities = 90/296 (30%), Positives = 137/296 (46%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
+ ++ +Y WG G+ G R R P+ + L G +D+A G H+A
Sbjct: 2864 LSSEGEVYSWGEAEDGKLGHGNRSPCDR-PRVIE-SLRGIEV------VDVAAGGAHSAC 2915
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND 136
V + G L+TWG +G+LG E + P+ V+ LQ V I+CG+ + +D
Sbjct: 2916 VTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLC--LTDD 2973
Query: 137 GTISTSRLWVWGQNQGSNFPRLFW-GAFTPNTI-------ICQVSCGSVHVVALSECGLL 188
T+ W WG R G P I + +V CGS VAL++ G +
Sbjct: 2974 DTV-----WSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAV 3028
Query: 189 QAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGE 248
WG +Y +LG G + + ++ PR ++G + +K+ ++ G H +E+GE
Sbjct: 3029 YTWGKGDYHRLGHG-SDDHVRRPRQVQGL--------QGKKVIAIATGSLHCVCCTEDGE 3079
Query: 249 VYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCAL-TSKGA 303
VYTWG GQLG + + + PR V AL G + VACG H+ A TSK A
Sbjct: 3080 VYTWGDNDEGQLGDGTTNAIQR---PRLVAALQGKKVNRVACGSAHTLAWSTSKPA 3132
Score = 300 (110.7 bits), Expect = 3.2e-21, Sum P(3) = 3.2e-21
Identities = 84/258 (32%), Positives = 133/258 (51%)
Query: 70 GHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAI 129
G H A+ DG +F+WG + G+LG + P ++ L+++ ++ I+CG+ +AA+
Sbjct: 1864 GGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAL 1923
Query: 130 AEPRENDGTISTSRLWVWGQ-NQGSNFPRL---FWGAFTPNTIICQVSCGS--VHVVALS 183
+ G + T L +G+ G N +L + +I QV+CGS +AL+
Sbjct: 1924 T----SSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVI-QVACGSRDAQTLALT 1978
Query: 184 ECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAV 243
+ GL+ +WG ++G+LGRG + EG P+ I E + + Q+ CG S A+
Sbjct: 1979 DEGLVFSWGDGDFGKLGRGGS-EGCNIPQNI--------ERLNGQGVCQIECGAQFSLAL 2029
Query: 244 SENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGA 303
+++G V+TWG G +LGH S K P+ V L G I VA G +H A+T G
Sbjct: 2030 TKSGVVWTWGKGDYFRLGHGSDVHVRK---PQVVEGLRGKKIVHVAVGALHCLAVTDSGQ 2086
Query: 304 LYAWGGSQAGQLGLGPQT 321
+YAWG + GQ G G T
Sbjct: 2087 VYAWGDNDHGQQGNGTTT 2104
Score = 298 (110.0 bits), Expect = 3.8e-21, Sum P(2) = 3.8e-21
Identities = 105/407 (25%), Positives = 177/407 (43%)
Query: 12 RPVD-NIPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACG 70
RP D + A + ++G+ H+ + G+ G ++ P C A A R + + G
Sbjct: 2750 RPDDWTLSAGGSGTIYGWGHNHR-GQLGGIEGAKVKVPTP-----CEALATLRPVQLIGG 2803
Query: 71 HEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSI---SCGAHCTA 127
+ AV +DG L+ G G+LG G E P ++ +Q F+K + S G HC A
Sbjct: 2804 EQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLA 2863
Query: 128 AIAEPREND-GTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECG 186
+E G +L G + PR+ + V+ G H ++ G
Sbjct: 2864 LSSEGEVYSWGEAEDGKLG-HGNRSPCDRPRVIESL--RGIEVVDVAAGGAHSACVTAAG 2920
Query: 187 LLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCG--EYHSAAVS 244
L WG YG+LG + + L+ P+++ EA + ++ ++CG + + ++
Sbjct: 2921 DLYTWGKGRYGRLGHSDSEDQLK-PKLV--------EALQGHRVIDIACGSGDAQTLCLT 2971
Query: 245 ENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGAL 304
++ V++WG G G+LG G K +P ++ +L G+ + V CG S ALT GA+
Sbjct: 2972 DDDTVWSWGDGDYGKLGRGG-SDGCK--VPMKIDSLTGLGVVKVECGSQFSVALTKSGAV 3028
Query: 305 YAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVAC--GHSHTLVYMR 362
Y WG +LG G SD + R + G +++A G H +
Sbjct: 3029 YTWGKGDYHRLGHG------------SDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTE 3076
Query: 363 DGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHS 408
DG ++ WG N GQ + + P V G+ V ++A G H+
Sbjct: 3077 DGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHT 3123
Score = 267 (99.0 bits), Expect = 1.6e-17, Sum P(2) = 1.6e-17
Identities = 88/289 (30%), Positives = 143/289 (49%)
Query: 134 ENDGTISTSRLWVWGQNQ-----GSNFPRLFWGAF--TPNTI-ICQVSCGSVHVVALSEC 185
E+ TI T +++VWG N G ++ +F T + + + QV+ GS + A++
Sbjct: 1761 ESTATIRT-KVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVE 1819
Query: 186 GLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSE 245
G + + G G+LG G++ + PR I + ++ ++K+ V G H+ A++
Sbjct: 1820 GKVYSCGEATNGRLGLGMSSGTVPIPRQITALSSYV-----VKKVA-VHSGGRHATALTV 1873
Query: 246 NGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALY 305
+G+V++WG G G+LGH S + DK PR + AL I+D+ACG HS ALTS G LY
Sbjct: 1874 DGKVFSWGEGDDGKLGHFSRMNCDK---PRLIEALKTKRIRDIACGSSHSAALTSSGELY 1930
Query: 306 AWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGH--SHTLVYMRD 363
WG + G+LG G T L P + + +L+ +Q VACG + TL +
Sbjct: 1931 TWGLGEYGRLGHGDNTTQ--LKP-------KMVKVLLGHRVIQ-VACGSRDAQTLALTDE 1980
Query: 364 GRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVL 411
G + WG +G+ S P ++ G+ V ++ G S L
Sbjct: 1981 GLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLAL 2029
Score = 266 (98.7 bits), Expect = 4.5e-17, Sum P(3) = 4.5e-17
Identities = 87/307 (28%), Positives = 143/307 (46%)
Query: 20 KSAIYVWGYNHSGQTGR-KGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVA 78
++ ++VWG N Q G KG + +++P F A + + +A G + AV
Sbjct: 1767 RTKVFVWGLNDKDQLGGLKGSK--IKVPS------FSETLSALNV-VQVAGGSKSLFAVT 1817
Query: 79 SDGTLFTWGANEFGQLGDGTEEGRKH-PEKVKQLQSEFVKSI---SCGAHCTAAIAEPRE 134
+G +++ G G+LG G G P ++ L S VK + S G H TA + +
Sbjct: 1818 VEGKVYSCGEATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKV 1877
Query: 135 ND-GTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGY 193
G +L + + + PRL T I ++CGS H AL+ G L WG
Sbjct: 1878 FSWGEGDDGKLGHFSR-MNCDKPRLIEALKTKR--IRDIACGSSHSAALTSSGELYTWGL 1934
Query: 194 NEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCG--EYHSAAVSENGEVYT 251
EYG+LG G L+ P+++K L ++ QV+CG + + A+++ G V++
Sbjct: 1935 GEYGRLGHGDNTTQLK-PKMVK---VLLGH-----RVIQVACGSRDAQTLALTDEGLVFS 1985
Query: 252 WGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQ 311
WG G G+LG + + +P+ + L+G + + CG S ALT G ++ WG
Sbjct: 1986 WGDGDFGKLGRGGSEGCN---IPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGD 2042
Query: 312 AGQLGLG 318
+LG G
Sbjct: 2043 YFRLGHG 2049
Score = 249 (92.7 bits), Expect = 8.7e-29, Sum P(3) = 8.7e-29
Identities = 71/238 (29%), Positives = 115/238 (48%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHE--HT 74
+ + +Y WG G+ G QL+ PK + L G R + +ACG T
Sbjct: 1923 LTSSGELYTWGLGEYGRLGHGDNTTQLK-PKMVKV-LLG------HRVIQVACGSRDAQT 1974
Query: 75 AAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRE 134
A+ +G +F+WG +FG+LG G EG P+ +++L + V I CGA + A+ +
Sbjct: 1975 LALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTK--- 2031
Query: 135 NDGTISTSRLWVWGQNQ------GSNF----PRLFWGAFTPNTIICQVSCGSVHVVALSE 184
G + W WG+ GS+ P++ G I V+ G++H +A+++
Sbjct: 2032 -SGVV-----WTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKK--IVHVAVGALHCLAVTD 2083
Query: 185 CGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAA 242
G + AWG N++GQ G G T + P +++G E +KIT+V+CG HS A
Sbjct: 2084 SGQVYAWGDNDHGQQGNGTTTVNRK-PTLVQGL--------EGQKITRVACGSSHSVA 2132
Score = 231 (86.4 bits), Expect = 1.8e-13, Sum P(2) = 1.8e-13
Identities = 78/247 (31%), Positives = 113/247 (45%)
Query: 171 QVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKI 230
Q+ G + A++ G L A GY G+LG G T E + P +++ ++K+
Sbjct: 2799 QLIGGEQTLFAVTADGKLYATGYGAGGRLGIGGT-ESVSTPTLLESIQHVF-----IKKV 2852
Query: 231 TQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVAC 290
V+ G H A+S GEVY+WG G+LGH + D+ PR + +L GI + DVA
Sbjct: 2853 A-VNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDR---PRVIESLRGIEVVDVAA 2908
Query: 291 GGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVP-NGVQL 349
GG HS +T+ G LY WG + G+LG SD+ + P LV G ++
Sbjct: 2909 GGAHSACVTAAGDLYTWGKGRYGRLG-------------HSDSEDQLKPKLVEALQGHRV 2955
Query: 350 V--ACGH--SHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAG 404
+ ACG + TL D + WG YG+ S P +D G V K+ G
Sbjct: 2956 IDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECG 3015
Query: 405 GGHSAVL 411
S L
Sbjct: 3016 SQFSVAL 3022
Score = 196 (74.1 bits), Expect = 1.3e-09, Sum P(2) = 1.3e-09
Identities = 52/185 (28%), Positives = 89/185 (48%)
Query: 229 KITQVSCG--EYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIK 286
++ QV+CG + + A+++ G V++WG G G+LG + + +P+ + L+G +
Sbjct: 1961 RVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCN---IPQNIERLNGQGVC 2017
Query: 287 DVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNG 346
+ CG S ALT G ++ WG +LG G SD + R ++ G
Sbjct: 2018 QIECGAQFSLALTKSGVVWTWGKGDYFRLGHG------------SDVHVRKPQVVEGLRG 2065
Query: 347 VQLV--ACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAA 403
++V A G H L G+++ WG N +GQ N +T P+ V G+ + ++A
Sbjct: 2066 KKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVAC 2125
Query: 404 GGGHS 408
G HS
Sbjct: 2126 GSSHS 2130
Score = 176 (67.0 bits), Expect = 8.7e-29, Sum P(3) = 8.7e-29
Identities = 47/131 (35%), Positives = 64/131 (48%)
Query: 230 ITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVA 289
+ +V CG S A++++G VYTWG G +LGH S D PR+V L G + +A
Sbjct: 3009 VVKVECGSQFSVALTKSGAVYTWGKGDYHRLGH---GSDDHVRRPRQVQGLQGKKVIAIA 3065
Query: 290 CGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQL 349
G +H T G +Y WG + GQLG G T + P R + L V
Sbjct: 3066 TGSLHCVCCTEDGEVYTWGDNDEGQLGDGT-TNAIQR-P-------RLVAALQGKK-VNR 3115
Query: 350 VACGHSHTLVY 360
VACG +HTL +
Sbjct: 3116 VACGSAHTLAW 3126
Score = 166 (63.5 bits), Expect = 5.9e-06, Sum P(3) = 5.9e-06
Identities = 45/131 (34%), Positives = 64/131 (48%)
Query: 230 ITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVA 289
+ Q+ CG S A++++G V+TWG G +LGH S K P+ V L G I VA
Sbjct: 2016 VCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRK---PQVVEGLRGKKIVHVA 2072
Query: 290 CGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQL 349
G +H A+T G +YAWG + GQ G G T N T + + +
Sbjct: 2073 VGALHCLAVTDSGQVYAWGDNDHGQQGNGTTT------VNRKPTLVQGLE----GQKITR 2122
Query: 350 VACGHSHTLVY 360
VACG SH++ +
Sbjct: 2123 VACGSSHSVAW 2133
Score = 135 (52.6 bits), Expect = 1.5e-24, Sum P(3) = 1.5e-24
Identities = 51/173 (29%), Positives = 74/173 (42%)
Query: 246 NGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALY 305
+G +Y WG GQLG G K +P AL + + G A+T+ G LY
Sbjct: 2761 SGTIYGWGHNHRGQLGGIE---GAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLY 2817
Query: 306 AWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGR 365
A G G+LG+G T S S + T +I + + V G H L +G
Sbjct: 2818 ATGYGAGGRLGIGG-TESVS-----TPTLLESIQHVFIKKVA--VNSGGKHCLALSSEGE 2869
Query: 366 IHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLADACSL 417
++ WG G+ + + P ++ G EV +AAGG HSA + A L
Sbjct: 2870 VYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDL 2922
Score = 43 (20.2 bits), Expect = 8.6e-23, Sum P(3) = 8.6e-23
Identities = 5/12 (41%), Positives = 10/12 (83%)
Query: 360 YMRDGRIHGWGY 371
++ DG ++GWG+
Sbjct: 2501 FISDGSVNGWGW 2512
Score = 43 (20.2 bits), Expect = 4.2e-15, Sum P(3) = 4.2e-15
Identities = 20/47 (42%), Positives = 23/47 (48%)
Query: 253 GLGSV-GQL-GHCSLQSGDKELLPRRV--VALDGIFIKDVACGGVHS 295
G SV GQ+ S S D LLP RV V G + D CGG +S
Sbjct: 3249 GTKSVFGQMCAKMSSFSPDSLLLPHRVWKVKFVGESVDD--CGGGYS 3293
Score = 37 (18.1 bits), Expect = 8.7e-29, Sum P(3) = 8.7e-29
Identities = 6/12 (50%), Positives = 9/12 (75%)
Query: 404 GGGHSAVLADAC 415
GGG+S +A+ C
Sbjct: 3289 GGGYSESIAEIC 3300
Score = 37 (18.1 bits), Expect = 8.7e-29, Sum P(3) = 8.7e-29
Identities = 6/12 (50%), Positives = 10/12 (83%)
Query: 446 SEALARLCERLR 457
SE++A +CE L+
Sbjct: 3293 SESIAEICEELQ 3304
>TAIR|locus:2146142 [details] [associations]
symbol:AT5G16040 "AT5G16040" species:3702 "Arabidopsis
thaliana" [GO:0003682 "chromatin binding" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0008536 "Ran GTPase binding" evidence=ISS]
INTERPRO:IPR000408 Pfam:PF00415 EMBL:CP002688 EMBL:AL391145
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 UniGene:At.19750
UniGene:At.49027 EMBL:BT028960 IPI:IPI00525887 PIR:T51387
RefSeq:NP_197108.1 HSSP:O87916 ProteinModelPortal:Q9LFS0 SMR:Q9LFS0
PRIDE:Q9LFS0 EnsemblPlants:AT5G16040.1 GeneID:831461
KEGG:ath:AT5G16040 TAIR:At5g16040 InParanoid:Q9LFS0 OMA:TTGHPME
PhylomeDB:Q9LFS0 ProtClustDB:CLSN2686124 Genevestigator:Q9LFS0
Uniprot:Q9LFS0
Length = 396
Score = 319 (117.4 bits), Expect = 1.5e-28, P = 1.5e-28
Identities = 105/347 (30%), Positives = 152/347 (43%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ WG+N G G + P L L AN + + A G H AV G
Sbjct: 59 LFTWGWNQRGTLGHPPETKTESTPS-LVKSL------ANVKIVQAAIGGWHCLAVDDQGR 111
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
+ WG NE+GQ G EE K E + ++ + V C T + T
Sbjct: 112 AYAWGGNEYGQCG---EEPSKD-ETGRPVRRDIVIPKRCAQQLTVRQVAAGGTHSVVLTR 167
Query: 143 R--LWVWGQNQGSNFPRLFWGAFTPNTI--ICQVSCGSVHVVALSECGLLQAWGYNEYGQ 198
+W WGQ + + + ++ G+ H +AL E G L AWG NEYGQ
Sbjct: 168 EGYVWTWGQPWPPGDIKQISVPVRVQGLENVRLIAVGAFHNLALKEDGTLWAWGNNEYGQ 227
Query: 199 LGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVG 258
LG G T + P ++G LD+ + ++ G +HS A++ GEVY WG G G
Sbjct: 228 LGTGDT-QPRSYPIPVQG----LDDLT----LVDIAAGGWHSTALTNEGEVYGWGRGEHG 278
Query: 259 QLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLG 318
+LG K +LP++V L G I V+CGG HS ALT G ++++G G+LG G
Sbjct: 279 RLGFGDNDKSSK-MLPQKVNLLAGEDIIQVSCGGTHSVALTRDGRIFSFGRGDHGRLGYG 337
Query: 319 PQTRS---FSL---IPNESDTYFRNIPILVVPNGV-QLVACGHSHTL 358
+ + L IP + F + + + VACG HTL
Sbjct: 338 RKVTTGQPLELPIHIP-PPEGRFNHTDEEDDGKWIAKHVACGGRHTL 383
Score = 257 (95.5 bits), Expect = 7.8e-20, P = 7.8e-20
Identities = 92/330 (27%), Positives = 146/330 (44%)
Query: 21 SAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASD 80
+++ WG GQ G G + + K+L + N R + G ++ A+ D
Sbjct: 5 TSVIAWGSGEDGQLGL-GTDEE----KELA-SVVDALEPFNVR--SVVGGSRNSLAICDD 56
Query: 81 GTLFTWGANEFGQLGDGTE-EGRKHPEKVKQLQS-EFVKSISCGAHCTAAIAEPRENDGT 138
G LFTWG N+ G LG E + P VK L + + V++ G HC A ++ G
Sbjct: 57 GKLFTWGWNQRGTLGHPPETKTESTPSLVKSLANVKIVQAAIGGWHCLAV-----DDQG- 110
Query: 139 ISTSRLWVWGQNQ----GSNFPRLFWGAFTPNTII----C-------QVSCGSVHVVALS 183
R + WG N+ G + G I+ C QV+ G H V L+
Sbjct: 111 ----RAYAWGGNEYGQCGEEPSKDETGRPVRRDIVIPKRCAQQLTVRQVAAGGTHSVVLT 166
Query: 184 ECGLLQAWGYN-EYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAA 242
G + WG G + + + P ++G LE + ++ G +H+ A
Sbjct: 167 REGYVWTWGQPWPPGDIKQ------ISVPVRVQG----------LENVRLIAVGAFHNLA 210
Query: 243 VSENGEVYTWGLGSVGQLGHCSLQSGDKE--LLPRRVVALDGIFIKDVACGGVHSCALTS 300
+ E+G ++ WG GQLG +GD + P V LD + + D+A GG HS ALT+
Sbjct: 211 LKEDGTLWAWGNNEYGQLG-----TGDTQPRSYPIPVQGLDDLTLVDIAAGGWHSTALTN 265
Query: 301 KGALYAWGGSQAGQLGLGPQTRSFSLIPNE 330
+G +Y WG + G+LG G +S ++P +
Sbjct: 266 EGEVYGWGRGEHGRLGFGDNDKSSKMLPQK 295
Score = 253 (94.1 bits), Expect = 2.4e-19, P = 2.4e-19
Identities = 79/260 (30%), Positives = 123/260 (47%)
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND 136
+AS ++ WG+ E GQLG GT+E ++ V L+ V+S+ G+ + AI + D
Sbjct: 1 MASATSVIAWGSGEDGQLGLGTDEEKELASVVDALEPFNVRSVVGGSRNSLAICD----D 56
Query: 137 GTISTSRLWVWGQNQGSNFPRLFWGAFTPNTI-------ICQVSCGSVHVVALSECGLLQ 189
G + T W W Q P TP+ + I Q + G H +A+ + G
Sbjct: 57 GKLFT---WGWNQRGTLGHPPETKTESTPSLVKSLANVKIVQAAIGGWHCLAVDDQGRAY 113
Query: 190 AWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEV 249
AWG NEYGQ G + + + R ++ + + QV+ G HS ++ G V
Sbjct: 114 AWGGNEYGQCGEEPSKD--ETGRPVRRDIVIPKRCAQQLTVRQVAAGGTHSVVLTREGYV 171
Query: 250 YTWGLGSVGQLGHCSLQSGD-KEL-LPRRVVALDGIFIKDVACGGVHSCALTSKGALYAW 307
+TWG GD K++ +P RV L+ + + +A G H+ AL G L+AW
Sbjct: 172 WTWGQ---------PWPPGDIKQISVPVRVQGLENVRL--IAVGAFHNLALKEDGTLWAW 220
Query: 308 GGSQAGQLGLGP-QTRSFSL 326
G ++ GQLG G Q RS+ +
Sbjct: 221 GNNEYGQLGTGDTQPRSYPI 240
Score = 234 (87.4 bits), Expect = 4.4e-17, P = 4.4e-17
Identities = 51/152 (33%), Positives = 85/152 (55%)
Query: 227 LEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKE--LLPRRVVALDGIF 284
LE + ++ G +H+ A+ E+G ++ WG GQLG +GD + P V LD +
Sbjct: 195 LENVRLIAVGAFHNLALKEDGTLWAWGNNEYGQLG-----TGDTQPRSYPIPVQGLDDLT 249
Query: 285 IKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVP 344
+ D+A GG HS ALT++G +Y WG + G+LG G +S ++P + + +L
Sbjct: 250 LVDIAAGGWHSTALTNEGEVYGWGRGEHGRLGFGDNDKSSKMLPQK-------VNLLAGE 302
Query: 345 NGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQ 376
+ +Q V+CG +H++ RDGRI +G +G+
Sbjct: 303 DIIQ-VSCGGTHSVALTRDGRIFSFGRGDHGR 333
Score = 209 (78.6 bits), Expect = 3.4e-14, P = 3.4e-14
Identities = 86/305 (28%), Positives = 133/305 (43%)
Query: 24 YVWGYNHSGQTGRK------GR--ERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTA 75
Y WG N GQ G + GR R + IPK+ C R +A G H+
Sbjct: 113 YAWGGNEYGQCGEEPSKDETGRPVRRDIVIPKR-------CAQQLTVR--QVAAGGTHSV 163
Query: 76 AVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREN 135
+ +G ++TWG G + P +V+ L++ V+ I+ GA A+ E
Sbjct: 164 VLTREGYVWTWGQ----PWPPGDIKQISVPVRVQGLEN--VRLIAVGAFHNLALKE---- 213
Query: 136 DGTISTSRLWVWGQNQ------GSNFPRLF---WGAFTPNTIICQVSCGSVHVVALSECG 186
DGT LW WG N+ G PR + T++ ++ G H AL+ G
Sbjct: 214 DGT-----LWAWGNNEYGQLGTGDTQPRSYPIPVQGLDDLTLV-DIAAGGWHSTALTNEG 267
Query: 187 LLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSEN 246
+ WG E+G+LG G + + +++ L E I QVSCG HS A++ +
Sbjct: 268 EVYGWGRGEHGRLGFG---DNDKSSKMLPQKVNLLAG----EDIIQVSCGGTHSVALTRD 320
Query: 247 GEVYTWGLGSVGQLGHC-SLQSGDKELLPRRVVALDGIF------------IKDVACGGV 293
G ++++G G G+LG+ + +G LP + +G F K VACGG
Sbjct: 321 GRIFSFGRGDHGRLGYGRKVTTGQPLELPIHIPPPEGRFNHTDEEDDGKWIAKHVACGGR 380
Query: 294 HSCAL 298
H+ A+
Sbjct: 381 HTLAI 385
Score = 201 (75.8 bits), Expect = 2.8e-13, P = 2.8e-13
Identities = 76/233 (32%), Positives = 110/233 (47%)
Query: 24 YVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGTL 83
YVW + GQ G +Q+ +P ++ G + L IA G H A+ DGTL
Sbjct: 170 YVWTW---GQPWPPGDIKQISVPVRVQ--------GLENVRL-IAVGAFHNLALKEDGTL 217
Query: 84 FTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGA-HCTAAIAEPREND-GTIST 141
+ WG NE+GQLG G + R +P V+ L + I+ G H TA E G
Sbjct: 218 WAWGNNEYGQLGTGDTQPRSYPIPVQGLDDLTLVDIAAGGWHSTALTNEGEVYGWGRGEH 277
Query: 142 SRLWVWGQNQGSN--FPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQL 199
RL +G N S+ P+ II QVSCG H VAL+ G + ++G ++G+L
Sbjct: 278 GRLG-FGDNDKSSKMLPQKV-NLLAGEDII-QVSCGGTHSVALTRDGRIFSFGRGDHGRL 334
Query: 200 GRG---ITCEGLQGPRVI---KGYAKFLDEAPELEKITQ-VSCGEYHSAAVSE 245
G G T + L+ P I +G DE + + I + V+CG H+ A+ E
Sbjct: 335 GYGRKVTTGQPLELPIHIPPPEGRFNHTDEEDDGKWIAKHVACGGRHTLAIVE 387
Score = 187 (70.9 bits), Expect = 1.1e-11, P = 1.1e-11
Identities = 60/192 (31%), Positives = 84/192 (43%)
Query: 229 KITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLP-RRVVAL-----DG 282
KI Q + G +H AV + G Y WG GQ G S D+ P RR + +
Sbjct: 92 KIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGE--EPSKDETGRPVRRDIVIPKRCAQQ 149
Query: 283 IFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILV 342
+ ++ VA GG HS LT +G ++ WG Q G + S +P + +
Sbjct: 150 LTVRQVAAGGTHSVVLTREGYVWTWG--QPWPPG---DIKQIS-VP---------VRVQG 194
Query: 343 VPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKL 401
+ N V+L+A G H L DG + WG N YGQ + YP PV + +
Sbjct: 195 LEN-VRLIAVGAFHNLALKEDGTLWAWGNNEYGQLGTGDTQPRSYPIPVQGLDDLTLVDI 253
Query: 402 AAGGGHSAVLAD 413
AAGG HS L +
Sbjct: 254 AAGGWHSTALTN 265
Score = 174 (66.3 bits), Expect = 3.1e-10, P = 3.1e-10
Identities = 60/171 (35%), Positives = 81/171 (47%)
Query: 249 VYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWG 308
V WG G GQLG L + +++ L V AL+ ++ V G +S A+ G L+ WG
Sbjct: 7 VIAWGSGEDGQLG---LGTDEEKELASVVDALEPFNVRSVVGGSRNSLAICDDGKLFTWG 63
Query: 309 GSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHG 368
+Q G LG P+T++ S P+ + N+ I VQ A G H L GR +
Sbjct: 64 WNQRGTLGHPPETKTEST-PSLVKS-LANVKI------VQ-AAIGGWHCLAVDDQGRAYA 114
Query: 369 WGYNSYGQAANEKST-YAWYPSPVDW-----CVGE--VRKLAAGGGHSAVL 411
WG N YGQ E S P D C + VR++AAGG HS VL
Sbjct: 115 WGGNEYGQCGEEPSKDETGRPVRRDIVIPKRCAQQLTVRQVAAGGTHSVVL 165
>UNIPROTKB|D4ACN3 [details] [associations]
symbol:Herc2 "Protein Herc2" species:10116 "Rattus
norvegicus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0020037 "heme binding"
evidence=IEA] Pfam:PF00632 InterPro:IPR000433 InterPro:IPR000569
InterPro:IPR001199 InterPro:IPR010606 Pfam:PF00173 Pfam:PF00569
Pfam:PF06701 PROSITE:PS01357 PROSITE:PS50135 PROSITE:PS50237
PROSITE:PS50255 PROSITE:PS51416 SMART:SM00119 SMART:SM00291
RGD:1307989 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005634
GO:GO:0005743 GO:GO:0046872 GO:GO:0008270 GO:GO:0006281
GO:GO:0007283 GO:GO:0020037 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 Gene3D:3.10.120.10 SUPFAM:SSF55856
InterPro:IPR008979 SUPFAM:SSF49785 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 InterPro:IPR004939 Pfam:PF03256
PROSITE:PS51284 Gene3D:2.30.30.30 InterPro:IPR021097
InterPro:IPR014722 Pfam:PF11515 SUPFAM:SSF56204
GeneTree:ENSGT00700000104208 OrthoDB:EOG41C6V9 InterPro:IPR006624
SMART:SM00706 IPI:IPI00764717 Ensembl:ENSRNOT00000019245
ArrayExpress:D4ACN3 Uniprot:D4ACN3
Length = 4779
Score = 312 (114.9 bits), Expect = 2.1e-22, Sum P(3) = 2.1e-22
Identities = 90/284 (31%), Positives = 135/284 (47%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ WG G G+ G ++ K P L A R DIACG H+AA+ S G
Sbjct: 3012 VFSWG---EGDDGKLGHFSRMNCDK---PRLI--EALKTKRIRDIACGSSHSAALTSSGE 3063
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREN------D 136
L+TWG E+G+LG G + P+ VK L V ++CG+ +A E D
Sbjct: 3064 LYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGD 3123
Query: 137 GTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEY 196
G +L G ++G N P+ +CQ+ CG+ +AL++ G++ WG +Y
Sbjct: 3124 GDFG--KLGRGG-SEGCNIPQNIERLNGQG--VCQIECGAQFSLALTKSGVVWTWGKGDY 3178
Query: 197 GQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGS 256
+LG G ++ P+V++G +KI V+ G H AV+++G+VY WG
Sbjct: 3179 FRLGHGSDVH-VRKPQVVEGLRG--------KKIVHVAVGALHCLAVTDSGQVYAWGDND 3229
Query: 257 VGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTS 300
GQ G+ + K P V L+G I VACG HS A T+
Sbjct: 3230 HGQQGNGTTTVNRK---PTLVQGLEGQKITRVACGSSHSVAWTT 3270
Score = 303 (111.7 bits), Expect = 1.7e-21, Sum P(2) = 1.7e-21
Identities = 90/296 (30%), Positives = 137/296 (46%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
+ ++ +Y WG G+ G R R P+ + L G +D+A G H+A
Sbjct: 3999 LSSEGEVYSWGEAEDGKLGHGNRSPCDR-PRVIE-SLRGIEV------VDVAAGGAHSAC 4050
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND 136
V + G L+TWG +G+LG E + P+ V+ LQ V I+CG+ + +D
Sbjct: 4051 VTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLC--LTDD 4108
Query: 137 GTISTSRLWVWGQNQGSNFPRLFW-GAFTPNTI-------ICQVSCGSVHVVALSECGLL 188
T+ W WG R G P I + +V CGS VAL++ G +
Sbjct: 4109 DTV-----WSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAV 4163
Query: 189 QAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGE 248
WG +Y +LG G + + ++ PR ++G + +K+ ++ G H +E+GE
Sbjct: 4164 YTWGKGDYHRLGHG-SDDHVRRPRQVQGL--------QGKKVIAIATGSLHCVCCTEDGE 4214
Query: 249 VYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCAL-TSKGA 303
VYTWG GQLG + + + PR V AL G + VACG H+ A TSK A
Sbjct: 4215 VYTWGDNDEGQLGDGTTNAIQR---PRLVAALQGKKVNRVACGSAHTLAWSTSKPA 4267
Score = 300 (110.7 bits), Expect = 7.7e-21, Sum P(3) = 7.7e-21
Identities = 84/258 (32%), Positives = 133/258 (51%)
Query: 70 GHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAI 129
G H A+ DG +F+WG + G+LG + P ++ L+++ ++ I+CG+ +AA+
Sbjct: 2999 GGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAL 3058
Query: 130 AEPRENDGTISTSRLWVWGQ-NQGSNFPRL---FWGAFTPNTIICQVSCGS--VHVVALS 183
+ G + T L +G+ G N +L + +I QV+CGS +AL+
Sbjct: 3059 T----SSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVI-QVACGSRDAQTLALT 3113
Query: 184 ECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAV 243
+ GL+ +WG ++G+LGRG + EG P+ I E + + Q+ CG S A+
Sbjct: 3114 DEGLVFSWGDGDFGKLGRGGS-EGCNIPQNI--------ERLNGQGVCQIECGAQFSLAL 3164
Query: 244 SENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGA 303
+++G V+TWG G +LGH S K P+ V L G I VA G +H A+T G
Sbjct: 3165 TKSGVVWTWGKGDYFRLGHGSDVHVRK---PQVVEGLRGKKIVHVAVGALHCLAVTDSGQ 3221
Query: 304 LYAWGGSQAGQLGLGPQT 321
+YAWG + GQ G G T
Sbjct: 3222 VYAWGDNDHGQQGNGTTT 3239
Score = 298 (110.0 bits), Expect = 6.9e-21, Sum P(2) = 6.9e-21
Identities = 105/407 (25%), Positives = 177/407 (43%)
Query: 12 RPVD-NIPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACG 70
RP D + A + ++G+ H+ + G+ G ++ P C A A R + + G
Sbjct: 3885 RPDDWTLSAGGSGTIYGWGHNHR-GQLGGIEGAKVKVPTP-----CEALATLRPVQLIGG 3938
Query: 71 HEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSI---SCGAHCTA 127
+ AV +DG L+ G G+LG G E P ++ +Q F+K + S G HC A
Sbjct: 3939 EQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLA 3998
Query: 128 AIAEPREND-GTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECG 186
+E G +L G + PR+ + V+ G H ++ G
Sbjct: 3999 LSSEGEVYSWGEAEDGKLG-HGNRSPCDRPRVIESL--RGIEVVDVAAGGAHSACVTAAG 4055
Query: 187 LLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCG--EYHSAAVS 244
L WG YG+LG + + L+ P+++ EA + ++ ++CG + + ++
Sbjct: 4056 DLYTWGKGRYGRLGHSDSEDQLK-PKLV--------EALQGHRVIDIACGSGDAQTLCLT 4106
Query: 245 ENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGAL 304
++ V++WG G G+LG G K +P ++ +L G+ + V CG S ALT GA+
Sbjct: 4107 DDDTVWSWGDGDYGKLGRGG-SDGCK--VPMKIDSLTGLGVVKVECGSQFSVALTKSGAV 4163
Query: 305 YAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVAC--GHSHTLVYMR 362
Y WG +LG G SD + R + G +++A G H +
Sbjct: 4164 YTWGKGDYHRLGHG------------SDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTE 4211
Query: 363 DGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHS 408
DG ++ WG N GQ + + P V G+ V ++A G H+
Sbjct: 4212 DGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHT 4258
Score = 291 (107.5 bits), Expect = 2.3e-20, Sum P(2) = 2.3e-20
Identities = 78/276 (28%), Positives = 130/276 (47%)
Query: 143 RLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRG 202
R++ N P+L G + N + H +AL+ G + +WG + G+LG G
Sbjct: 417 RVYTQAYNSDMLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHG 476
Query: 203 ITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGH 262
T L+ P+VI ++ +A + + ++CG +SAA++ GE+YTWG G+ G+LGH
Sbjct: 477 DTVP-LEEPKVISAFSG--KQAGK--HVVHIACGSTYSAAITAEGELYTWGRGNYGRLGH 531
Query: 263 CSLQSGDKELLPRRVVALDGIFIKDVACGG--VHSCALTSKGALYAWGGSQAGQLGLGPQ 320
S + E +P V L G+ + DVACG + A+T G +++WG G+LG G
Sbjct: 532 ---GSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGS 588
Query: 321 T--RSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAA 378
++ LI D V V CG ++ +DG+++ WG +
Sbjct: 589 DGCKTPKLIEKLQDL------------DVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLG 636
Query: 379 NEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLAD 413
+ + YP ++ G+ V +AAG H L +
Sbjct: 637 HGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTE 672
Score = 269 (99.8 bits), Expect = 4.7e-17, Sum P(3) = 4.7e-17
Identities = 80/255 (31%), Positives = 130/255 (50%)
Query: 70 GHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSE----FVKSISCGAHC 125
GH H A+A+ G +++WG + G+LG G + P+ + + V I+CG+
Sbjct: 450 GH-HYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTY 508
Query: 126 TAAIAEPRE--NDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGS--VHVVA 181
+AAI E G + RL G ++ P L G + V+CGS +A
Sbjct: 509 SAAITAEGELYTWGRGNYGRLG-HGSSEDEAIPMLVAGL--KGLKVIDVACGSGDAQTLA 565
Query: 182 LSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSA 241
++E G + +WG +YG+LGRG + +G + P++I+ K D L+ I +V CG S
Sbjct: 566 VTENGQVWSWGDGDYGKLGRGGS-DGCKTPKLIE---KLQD----LDVI-KVRCGSQFSI 616
Query: 242 AVSENGEVYTWGLGSVGQLGHCSLQSGDKELL--PRRVVALDGIFIKDVACGGVHSCALT 299
A++++G+VY+WG G +LGH G +E + P+ + L G + DVA G H ALT
Sbjct: 617 ALTKDGQVYSWGKGDNQRLGH-----GTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALT 671
Query: 300 SKGALYAWGGSQAGQ 314
+++WG + Q
Sbjct: 672 EDSEVHSWGSNDQCQ 686
Score = 269 (99.8 bits), Expect = 4.7e-17, Sum P(3) = 4.7e-17
Identities = 87/293 (29%), Positives = 138/293 (47%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
+ A +Y WG G+ G G L PK + G AG + + IACG ++AA
Sbjct: 456 LAATGEVYSWGCGDGGRLGH-GDTVPLEEPKVISA-FSGKQAGKHV--VHIACGSTYSAA 511
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND 136
+ ++G L+TWG +G+LG G+ E P V L+ V ++CG+ +A EN
Sbjct: 512 ITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVT-EN- 569
Query: 137 GTISTSRLWVWGQNQGSNFPRLFW-GAFTPNTI-------ICQVSCGSVHVVALSECGLL 188
++W WG R G TP I + +V CGS +AL++ G +
Sbjct: 570 -----GQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVIKVRCGSQFSIALTKDGQV 624
Query: 189 QAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGE 248
+WG + +LG G T E ++ P++++G + +K+ V+ G H A++E+ E
Sbjct: 625 YSWGKGDNQRLGHG-TEEHVRYPKLLEGL--------QGKKVIDVAAGSTHCLALTEDSE 675
Query: 249 VYTWGLGSVGQLGHC-SLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTS 300
V++WG S Q H +L+ E P + LD I +ACG S A +S
Sbjct: 676 VHSWG--SNDQCQHFDTLRVTKPE--PTALPGLDTKHIVGIACGPAQSFAWSS 724
Score = 267 (99.0 bits), Expect = 2.9e-17, Sum P(2) = 2.9e-17
Identities = 88/289 (30%), Positives = 143/289 (49%)
Query: 134 ENDGTISTSRLWVWGQNQ-----GSNFPRLFWGAF--TPNTI-ICQVSCGSVHVVALSEC 185
E+ TI T +++VWG N G ++ +F T + + + QV+ GS + A++
Sbjct: 2896 ESTATIRT-KVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVE 2954
Query: 186 GLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSE 245
G + + G G+LG G++ + PR I + ++ ++K+ V G H+ A++
Sbjct: 2955 GKVYSCGEATNGRLGLGMSSGTVPIPRQITALSSYV-----VKKVA-VHSGGRHATALTV 3008
Query: 246 NGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALY 305
+G+V++WG G G+LGH S + DK PR + AL I+D+ACG HS ALTS G LY
Sbjct: 3009 DGKVFSWGEGDDGKLGHFSRMNCDK---PRLIEALKTKRIRDIACGSSHSAALTSSGELY 3065
Query: 306 AWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGH--SHTLVYMRD 363
WG + G+LG G T L P + + +L+ +Q VACG + TL +
Sbjct: 3066 TWGLGEYGRLGHGDNTTQ--LKP-------KMVKVLLGHRVIQ-VACGSRDAQTLALTDE 3115
Query: 364 GRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVL 411
G + WG +G+ S P ++ G+ V ++ G S L
Sbjct: 3116 GLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLAL 3164
Score = 266 (98.7 bits), Expect = 1.1e-16, Sum P(3) = 1.1e-16
Identities = 87/307 (28%), Positives = 143/307 (46%)
Query: 20 KSAIYVWGYNHSGQTGR-KGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVA 78
++ ++VWG N Q G KG + +++P F A + + +A G + AV
Sbjct: 2902 RTKVFVWGLNDKDQLGGLKGSK--IKVPS------FSETLSALNV-VQVAGGSKSLFAVT 2952
Query: 79 SDGTLFTWGANEFGQLGDGTEEGRKH-PEKVKQLQSEFVKSI---SCGAHCTAAIAEPRE 134
+G +++ G G+LG G G P ++ L S VK + S G H TA + +
Sbjct: 2953 VEGKVYSCGEATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKV 3012
Query: 135 ND-GTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGY 193
G +L + + + PRL T I ++CGS H AL+ G L WG
Sbjct: 3013 FSWGEGDDGKLGHFSR-MNCDKPRLIEALKTKR--IRDIACGSSHSAALTSSGELYTWGL 3069
Query: 194 NEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCG--EYHSAAVSENGEVYT 251
EYG+LG G L+ P+++K L ++ QV+CG + + A+++ G V++
Sbjct: 3070 GEYGRLGHGDNTTQLK-PKMVK---VLLGH-----RVIQVACGSRDAQTLALTDEGLVFS 3120
Query: 252 WGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQ 311
WG G G+LG + + +P+ + L+G + + CG S ALT G ++ WG
Sbjct: 3121 WGDGDFGKLGRGGSEGCN---IPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGD 3177
Query: 312 AGQLGLG 318
+LG G
Sbjct: 3178 YFRLGHG 3184
Score = 249 (92.7 bits), Expect = 2.1e-28, Sum P(3) = 2.1e-28
Identities = 71/238 (29%), Positives = 115/238 (48%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHE--HT 74
+ + +Y WG G+ G QL+ PK + L G R + +ACG T
Sbjct: 3058 LTSSGELYTWGLGEYGRLGHGDNTTQLK-PKMVKV-LLG------HRVIQVACGSRDAQT 3109
Query: 75 AAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRE 134
A+ +G +F+WG +FG+LG G EG P+ +++L + V I CGA + A+ +
Sbjct: 3110 LALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTK--- 3166
Query: 135 NDGTISTSRLWVWGQNQ------GSNF----PRLFWGAFTPNTIICQVSCGSVHVVALSE 184
G + W WG+ GS+ P++ G I V+ G++H +A+++
Sbjct: 3167 -SGVV-----WTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKK--IVHVAVGALHCLAVTD 3218
Query: 185 CGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAA 242
G + AWG N++GQ G G T + P +++G E +KIT+V+CG HS A
Sbjct: 3219 SGQVYAWGDNDHGQQGNGTTTVNRK-PTLVQGL--------EGQKITRVACGSSHSVA 3267
Score = 231 (86.4 bits), Expect = 3.2e-13, Sum P(2) = 3.2e-13
Identities = 78/247 (31%), Positives = 113/247 (45%)
Query: 171 QVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKI 230
Q+ G + A++ G L A GY G+LG G T E + P +++ ++K+
Sbjct: 3934 QLIGGEQTLFAVTADGKLYATGYGAGGRLGIGGT-ESVSTPTLLESIQHVF-----IKKV 3987
Query: 231 TQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVAC 290
V+ G H A+S GEVY+WG G+LGH + D+ PR + +L GI + DVA
Sbjct: 3988 A-VNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDR---PRVIESLRGIEVVDVAA 4043
Query: 291 GGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVP-NGVQL 349
GG HS +T+ G LY WG + G+LG SD+ + P LV G ++
Sbjct: 4044 GGAHSACVTAAGDLYTWGKGRYGRLG-------------HSDSEDQLKPKLVEALQGHRV 4090
Query: 350 V--ACGH--SHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAG 404
+ ACG + TL D + WG YG+ S P +D G V K+ G
Sbjct: 4091 IDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECG 4150
Query: 405 GGHSAVL 411
S L
Sbjct: 4151 SQFSVAL 4157
Score = 228 (85.3 bits), Expect = 2.3e-12, Sum P(3) = 2.3e-12
Identities = 66/210 (31%), Positives = 98/210 (46%)
Query: 169 ICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELE 228
+ ++CGS + A++ G L WG YG+LG G + E P ++ G K L
Sbjct: 499 VVHIACGSTYSAAITAEGELYTWGRGNYGRLGHG-SSEDEAIPMLVAGL-KGL------- 549
Query: 229 KITQVSCG--EYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIK 286
K+ V+CG + + AV+ENG+V++WG G G+LG G K P+ + L + +
Sbjct: 550 KVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGG-SDGCKT--PKLIEKLQDLDVI 606
Query: 287 DVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNG 346
V CG S ALT G +Y+WG +LG G + E Y + + L
Sbjct: 607 KVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTE---------EHVRYPKLLEGLQGKKV 657
Query: 347 VQLVACGHSHTLVYMRDGRIHGWGYNSYGQ 376
+ VA G +H L D +H WG N Q
Sbjct: 658 ID-VAAGSTHCLALTEDSEVHSWGSNDQCQ 686
Score = 196 (74.1 bits), Expect = 2.3e-09, Sum P(2) = 2.3e-09
Identities = 52/185 (28%), Positives = 89/185 (48%)
Query: 229 KITQVSCG--EYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIK 286
++ QV+CG + + A+++ G V++WG G G+LG + + +P+ + L+G +
Sbjct: 3096 RVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCN---IPQNIERLNGQGVC 3152
Query: 287 DVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNG 346
+ CG S ALT G ++ WG +LG G SD + R ++ G
Sbjct: 3153 QIECGAQFSLALTKSGVVWTWGKGDYFRLGHG------------SDVHVRKPQVVEGLRG 3200
Query: 347 VQLV--ACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAA 403
++V A G H L G+++ WG N +GQ N +T P+ V G+ + ++A
Sbjct: 3201 KKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVAC 3260
Query: 404 GGGHS 408
G HS
Sbjct: 3261 GSSHS 3265
Score = 195 (73.7 bits), Expect = 2.9e-09, Sum P(2) = 2.9e-09
Identities = 73/255 (28%), Positives = 113/255 (44%)
Query: 169 ICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELE 228
+ QV+C + LS G + YN + P++++G A + +
Sbjct: 399 VMQVACAEKRFLILSRNGRVYTQAYNS-----------DMLAPQLVQGLA-----SRNIV 442
Query: 229 KITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELL--PRRVVALDGI--- 283
KI S G +H A++ GEVY+WG G G+LGH GD L P+ + A G
Sbjct: 443 KIAAHSDG-HHYLALAATGEVYSWGCGDGGRLGH-----GDTVPLEEPKVISAFSGKQAG 496
Query: 284 -FIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILV 342
+ +ACG +S A+T++G LY WG G+LG G +E + IP+LV
Sbjct: 497 KHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGS---------SEDEA----IPMLV 543
Query: 343 VP-NGVQL--VACGH--SHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG- 396
G+++ VACG + TL +G++ WG YG+ S P ++
Sbjct: 544 AGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL 603
Query: 397 EVRKLAAGGGHSAVL 411
+V K+ G S L
Sbjct: 604 DVIKVRCGSQFSIAL 618
Score = 176 (67.0 bits), Expect = 2.1e-28, Sum P(3) = 2.1e-28
Identities = 47/131 (35%), Positives = 64/131 (48%)
Query: 230 ITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVA 289
+ +V CG S A++++G VYTWG G +LGH S D PR+V L G + +A
Sbjct: 4144 VVKVECGSQFSVALTKSGAVYTWGKGDYHRLGH---GSDDHVRRPRQVQGLQGKKVIAIA 4200
Query: 290 CGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQL 349
G +H T G +Y WG + GQLG G T + P R + L V
Sbjct: 4201 TGSLHCVCCTEDGEVYTWGDNDEGQLGDGT-TNAIQR-P-------RLVAALQGKK-VNR 4250
Query: 350 VACGHSHTLVY 360
VACG +HTL +
Sbjct: 4251 VACGSAHTLAW 4261
Score = 166 (63.5 bits), Expect = 1.3e-05, Sum P(3) = 1.3e-05
Identities = 45/131 (34%), Positives = 64/131 (48%)
Query: 230 ITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVA 289
+ Q+ CG S A++++G V+TWG G +LGH S K P+ V L G I VA
Sbjct: 3151 VCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRK---PQVVEGLRGKKIVHVA 3207
Query: 290 CGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQL 349
G +H A+T G +YAWG + GQ G G T N T + + +
Sbjct: 3208 VGALHCLAVTDSGQVYAWGDNDHGQQGNGTTT------VNRKPTLVQGLE----GQKITR 3257
Query: 350 VACGHSHTLVY 360
VACG SH++ +
Sbjct: 3258 VACGSSHSVAW 3268
Score = 135 (52.6 bits), Expect = 3.6e-24, Sum P(3) = 3.6e-24
Identities = 51/173 (29%), Positives = 74/173 (42%)
Query: 246 NGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALY 305
+G +Y WG GQLG G K +P AL + + G A+T+ G LY
Sbjct: 3896 SGTIYGWGHNHRGQLGGIE---GAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLY 3952
Query: 306 AWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGR 365
A G G+LG+G T S S + T +I + + V G H L +G
Sbjct: 3953 ATGYGAGGRLGIGG-TESVS-----TPTLLESIQHVFIKKVA--VNSGGKHCLALSSEGE 4004
Query: 366 IHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLADACSL 417
++ WG G+ + + P ++ G EV +AAGG HSA + A L
Sbjct: 4005 VYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDL 4057
Score = 43 (20.2 bits), Expect = 2.1e-22, Sum P(3) = 2.1e-22
Identities = 5/12 (41%), Positives = 10/12 (83%)
Query: 360 YMRDGRIHGWGY 371
++ DG ++GWG+
Sbjct: 3636 FISDGSVNGWGW 3647
Score = 43 (20.2 bits), Expect = 9.9e-15, Sum P(3) = 9.9e-15
Identities = 20/47 (42%), Positives = 23/47 (48%)
Query: 253 GLGSV-GQL-GHCSLQSGDKELLPRRV--VALDGIFIKDVACGGVHS 295
G SV GQ+ S S D LLP RV V G + D CGG +S
Sbjct: 4384 GTKSVFGQMCAKMSSFSPDSLLLPHRVWKVKFVGESVDD--CGGGYS 4428
Score = 40 (19.1 bits), Expect = 2.3e-20, Sum P(2) = 2.3e-20
Identities = 14/48 (29%), Positives = 21/48 (43%)
Query: 424 RLAESVTLSNASEIEDVASRTGSEALA-RLCERLREHSLHGDEFDCDD 470
+L S T S ++ + + EA A LC+ L S H C+D
Sbjct: 2327 QLLSSAT--QPSPVKAIFDKQELEAAALALCQCLAVESTHPSSPGCED 2372
Score = 37 (18.1 bits), Expect = 2.1e-28, Sum P(3) = 2.1e-28
Identities = 6/12 (50%), Positives = 9/12 (75%)
Query: 404 GGGHSAVLADAC 415
GGG+S +A+ C
Sbjct: 4424 GGGYSESIAEIC 4435
Score = 37 (18.1 bits), Expect = 2.1e-28, Sum P(3) = 2.1e-28
Identities = 6/12 (50%), Positives = 10/12 (83%)
Query: 446 SEALARLCERLR 457
SE++A +CE L+
Sbjct: 4428 SESIAEICEELQ 4439
>MGI|MGI:103234 [details] [associations]
symbol:Herc2 "hect (homologous to the E6-AP (UBE3A) carboxyl
terminus) domain and RCC1 (CHC1)-like domain (RLD) 2" species:10090
"Mus musculus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISO;IBA] [GO:0005622 "intracellular" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISO;IBA] [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005743 "mitochondrial inner membrane"
evidence=IDA] [GO:0005856 "cytoskeleton" evidence=IEA] [GO:0006281
"DNA repair" evidence=ISO] [GO:0006464 "cellular protein
modification process" evidence=IEA] [GO:0006974 "response to DNA
damage stimulus" evidence=ISO] [GO:0007283 "spermatogenesis"
evidence=IMP] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=ISO] [GO:0016874
"ligase activity" evidence=IEA] [GO:0020037 "heme binding"
evidence=IEA] [GO:0031625 "ubiquitin protein ligase binding"
evidence=ISO] [GO:0032183 "SUMO binding" evidence=ISO] [GO:0042787
"protein ubiquitination involved in ubiquitin-dependent protein
catabolic process" evidence=IBA] [GO:0046872 "metal ion binding"
evidence=IEA] Pfam:PF00632 InterPro:IPR000433 InterPro:IPR000569
InterPro:IPR001199 InterPro:IPR010606 Pfam:PF00173 Pfam:PF00569
Pfam:PF06701 PROSITE:PS00191 PROSITE:PS01357 PROSITE:PS50082
PROSITE:PS50135 PROSITE:PS50237 PROSITE:PS50255 PROSITE:PS50294
PROSITE:PS51416 SMART:SM00119 SMART:SM00291 UniPathway:UPA00143
MGI:MGI:103234 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005634
GO:GO:0005814 PROSITE:PS00678 GO:GO:0005743 GO:GO:0046872
GO:GO:0008270 GO:GO:0006281 GO:GO:0007283 GO:GO:0020037
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
Gene3D:3.10.120.10 SUPFAM:SSF55856 InterPro:IPR008979
SUPFAM:SSF49785 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00625
PROSITE:PS00626 PROSITE:PS50012 InterPro:IPR004939 Pfam:PF03256
PROSITE:PS51284 GO:GO:0042787 GO:GO:0032183 Gene3D:2.30.30.30
InterPro:IPR021097 InterPro:IPR014722 Pfam:PF11515 SUPFAM:SSF56204
eggNOG:COG5021 GeneTree:ENSGT00700000104208 CTD:8924 KO:K10595
OMA:QLAFTRD HOVERGEN:HBG081598 OrthoDB:EOG41C6V9 InterPro:IPR006624
SMART:SM00706 EMBL:AF061529 EMBL:AF071173 EMBL:AC102121
EMBL:AC102150 EMBL:AK141515 EMBL:AK148361 EMBL:AK161826
EMBL:AK162270 EMBL:AK162708 EMBL:AK220338 EMBL:BC044667
EMBL:BC054829 IPI:IPI00309574 IPI:IPI00314989 RefSeq:NP_034548.2
UniGene:Mm.20929 ProteinModelPortal:Q4U2R1 SMR:Q4U2R1 STRING:Q4U2R1
PhosphoSite:Q4U2R1 PaxDb:Q4U2R1 PRIDE:Q4U2R1
Ensembl:ENSMUST00000076226 Ensembl:ENSMUST00000164095 GeneID:15204
KEGG:mmu:15204 UCSC:uc009hdv.1 InParanoid:Q4U2R1 ChiTaRS:HERC2
NextBio:287753 Bgee:Q4U2R1 Genevestigator:Q4U2R1
GermOnline:ENSMUSG00000030451 Uniprot:Q4U2R1
Length = 4836
Score = 312 (114.9 bits), Expect = 2.2e-22, Sum P(3) = 2.2e-22
Identities = 90/284 (31%), Positives = 135/284 (47%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ WG G G+ G ++ K P L A R DIACG H+AA+ S G
Sbjct: 3069 VFSWG---EGDDGKLGHFSRMNCDK---PRLI--EALKTKRIRDIACGSSHSAALTSSGE 3120
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREN------D 136
L+TWG E+G+LG G + P+ VK L V ++CG+ +A E D
Sbjct: 3121 LYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGD 3180
Query: 137 GTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEY 196
G +L G ++G N P+ +CQ+ CG+ +AL++ G++ WG +Y
Sbjct: 3181 GDFG--KLGRGG-SEGCNIPQNIERLNGQG--VCQIECGAQFSLALTKSGVVWTWGKGDY 3235
Query: 197 GQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGS 256
+LG G ++ P+V++G +KI V+ G H AV+++G+VY WG
Sbjct: 3236 FRLGHGSDVH-VRKPQVVEGLRG--------KKIVHVAVGALHCLAVTDSGQVYAWGDND 3286
Query: 257 VGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTS 300
GQ G+ + K P V L+G I VACG HS A T+
Sbjct: 3287 HGQQGNGTTTVNRK---PTLVQGLEGQKITRVACGSSHSVAWTT 3327
Score = 303 (111.7 bits), Expect = 1.7e-21, Sum P(2) = 1.7e-21
Identities = 90/296 (30%), Positives = 137/296 (46%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
+ ++ +Y WG G+ G R R P+ + L G +D+A G H+A
Sbjct: 4056 LSSEGEVYSWGEAEDGKLGHGNRSPCDR-PRVIE-SLRGIEV------VDVAAGGAHSAC 4107
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND 136
V + G L+TWG +G+LG E + P+ V+ LQ V I+CG+ + +D
Sbjct: 4108 VTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLC--LTDD 4165
Query: 137 GTISTSRLWVWGQNQGSNFPRLFW-GAFTPNTI-------ICQVSCGSVHVVALSECGLL 188
T+ W WG R G P I + +V CGS VAL++ G +
Sbjct: 4166 DTV-----WSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAV 4220
Query: 189 QAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGE 248
WG +Y +LG G + + ++ PR ++G + +K+ ++ G H +E+GE
Sbjct: 4221 YTWGKGDYHRLGHG-SDDHVRRPRQVQGL--------QGKKVIAIATGSLHCVCCTEDGE 4271
Query: 249 VYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCAL-TSKGA 303
VYTWG GQLG + + + PR V AL G + VACG H+ A TSK A
Sbjct: 4272 VYTWGDNDEGQLGDGTTNAIQR---PRLVAALQGKKVNRVACGSAHTLAWSTSKPA 4324
Score = 300 (110.7 bits), Expect = 8.0e-21, Sum P(3) = 8.0e-21
Identities = 84/258 (32%), Positives = 133/258 (51%)
Query: 70 GHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAI 129
G H A+ DG +F+WG + G+LG + P ++ L+++ ++ I+CG+ +AA+
Sbjct: 3056 GGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAL 3115
Query: 130 AEPRENDGTISTSRLWVWGQ-NQGSNFPRL---FWGAFTPNTIICQVSCGS--VHVVALS 183
+ G + T L +G+ G N +L + +I QV+CGS +AL+
Sbjct: 3116 T----SSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVI-QVACGSRDAQTLALT 3170
Query: 184 ECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAV 243
+ GL+ +WG ++G+LGRG + EG P+ I E + + Q+ CG S A+
Sbjct: 3171 DEGLVFSWGDGDFGKLGRGGS-EGCNIPQNI--------ERLNGQGVCQIECGAQFSLAL 3221
Query: 244 SENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGA 303
+++G V+TWG G +LGH S K P+ V L G I VA G +H A+T G
Sbjct: 3222 TKSGVVWTWGKGDYFRLGHGSDVHVRK---PQVVEGLRGKKIVHVAVGALHCLAVTDSGQ 3278
Query: 304 LYAWGGSQAGQLGLGPQT 321
+YAWG + GQ G G T
Sbjct: 3279 VYAWGDNDHGQQGNGTTT 3296
Score = 298 (110.0 bits), Expect = 7.1e-21, Sum P(2) = 7.1e-21
Identities = 105/407 (25%), Positives = 177/407 (43%)
Query: 12 RPVD-NIPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACG 70
RP D + A + ++G+ H+ + G+ G ++ P C A A R + + G
Sbjct: 3942 RPDDWTLSAGGSGTIYGWGHNHR-GQLGGIEGAKVKVPTP-----CEALATLRPVQLIGG 3995
Query: 71 HEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSI---SCGAHCTA 127
+ AV +DG L+ G G+LG G E P ++ +Q F+K + S G HC A
Sbjct: 3996 EQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLA 4055
Query: 128 AIAEPREND-GTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECG 186
+E G +L G + PR+ + V+ G H ++ G
Sbjct: 4056 LSSEGEVYSWGEAEDGKLG-HGNRSPCDRPRVIESL--RGIEVVDVAAGGAHSACVTAAG 4112
Query: 187 LLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCG--EYHSAAVS 244
L WG YG+LG + + L+ P+++ EA + ++ ++CG + + ++
Sbjct: 4113 DLYTWGKGRYGRLGHSDSEDQLK-PKLV--------EALQGHRVIDIACGSGDAQTLCLT 4163
Query: 245 ENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGAL 304
++ V++WG G G+LG G K +P ++ +L G+ + V CG S ALT GA+
Sbjct: 4164 DDDTVWSWGDGDYGKLGRGG-SDGCK--VPMKIDSLTGLGVVKVECGSQFSVALTKSGAV 4220
Query: 305 YAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVAC--GHSHTLVYMR 362
Y WG +LG G SD + R + G +++A G H +
Sbjct: 4221 YTWGKGDYHRLGHG------------SDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTE 4268
Query: 363 DGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHS 408
DG ++ WG N GQ + + P V G+ V ++A G H+
Sbjct: 4269 DGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHT 4315
Score = 291 (107.5 bits), Expect = 2.3e-20, Sum P(2) = 2.3e-20
Identities = 78/276 (28%), Positives = 130/276 (47%)
Query: 143 RLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRG 202
R++ N P+L G + N + H +AL+ G + +WG + G+LG G
Sbjct: 472 RVYTQAYNSDMLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHG 531
Query: 203 ITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGH 262
T L+ P+VI ++ +A + + ++CG +SAA++ GE+YTWG G+ G+LGH
Sbjct: 532 DTVP-LEEPKVISAFSG--KQAGK--HVVHIACGSTYSAAITAEGELYTWGRGNYGRLGH 586
Query: 263 CSLQSGDKELLPRRVVALDGIFIKDVACGG--VHSCALTSKGALYAWGGSQAGQLGLGPQ 320
S + E +P V L G+ + DVACG + A+T G +++WG G+LG G
Sbjct: 587 ---GSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGS 643
Query: 321 T--RSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAA 378
++ LI D V V CG ++ +DG+++ WG +
Sbjct: 644 DGCKTPKLIEKLQDL------------DVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLG 691
Query: 379 NEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLAD 413
+ + YP ++ G+ V +AAG H L +
Sbjct: 692 HGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTE 727
Score = 271 (100.5 bits), Expect = 2.8e-17, Sum P(3) = 2.8e-17
Identities = 87/293 (29%), Positives = 138/293 (47%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
+ A +Y WG G+ G G L PK + G AG + + IACG ++AA
Sbjct: 511 LAATGEVYSWGCGDGGRLGH-GDTVPLEEPKVISA-FSGKQAGKHV--VHIACGSTYSAA 566
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND 136
+ ++G L+TWG +G+LG G+ E P V L+ V ++CG+ +A EN
Sbjct: 567 ITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVT-EN- 624
Query: 137 GTISTSRLWVWGQNQGSNFPRLFW-GAFTPNTI-------ICQVSCGSVHVVALSECGLL 188
++W WG R G TP I + +V CGS +AL++ G +
Sbjct: 625 -----GQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVIKVRCGSQFSIALTKDGQV 679
Query: 189 QAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGE 248
+WG + +LG G T E ++ P++++G + +K+ V+ G H A++E+ E
Sbjct: 680 YSWGKGDNQRLGHG-TEEHVRYPKLLEGL--------QGKKVIDVAAGSTHCLALTEDSE 730
Query: 249 VYTWGLGSVGQLGHC-SLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTS 300
V++WG S Q H +L+ E P + LD I +ACG S A +S
Sbjct: 731 VHSWG--SNDQCQHFDTLRVTKPE--PTALPGLDSKHIVGIACGPAQSFAWSS 779
Score = 269 (99.8 bits), Expect = 4.9e-17, Sum P(3) = 4.9e-17
Identities = 80/255 (31%), Positives = 130/255 (50%)
Query: 70 GHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSE----FVKSISCGAHC 125
GH H A+A+ G +++WG + G+LG G + P+ + + V I+CG+
Sbjct: 505 GH-HYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTY 563
Query: 126 TAAIAEPRE--NDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGS--VHVVA 181
+AAI E G + RL G ++ P L G + V+CGS +A
Sbjct: 564 SAAITAEGELYTWGRGNYGRLG-HGSSEDEAIPMLVAGL--KGLKVIDVACGSGDAQTLA 620
Query: 182 LSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSA 241
++E G + +WG +YG+LGRG + +G + P++I+ K D L+ I +V CG S
Sbjct: 621 VTENGQVWSWGDGDYGKLGRGGS-DGCKTPKLIE---KLQD----LDVI-KVRCGSQFSI 671
Query: 242 AVSENGEVYTWGLGSVGQLGHCSLQSGDKELL--PRRVVALDGIFIKDVACGGVHSCALT 299
A++++G+VY+WG G +LGH G +E + P+ + L G + DVA G H ALT
Sbjct: 672 ALTKDGQVYSWGKGDNQRLGH-----GTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALT 726
Query: 300 SKGALYAWGGSQAGQ 314
+++WG + Q
Sbjct: 727 EDSEVHSWGSNDQCQ 741
Score = 267 (99.0 bits), Expect = 3.0e-17, Sum P(2) = 3.0e-17
Identities = 88/289 (30%), Positives = 143/289 (49%)
Query: 134 ENDGTISTSRLWVWGQNQ-----GSNFPRLFWGAF--TPNTI-ICQVSCGSVHVVALSEC 185
E+ TI T +++VWG N G ++ +F T + + + QV+ GS + A++
Sbjct: 2953 ESTATIRT-KVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVE 3011
Query: 186 GLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSE 245
G + + G G+LG G++ + PR I + ++ ++K+ V G H+ A++
Sbjct: 3012 GKVYSCGEATNGRLGLGMSSGTVPIPRQITALSSYV-----VKKVA-VHSGGRHATALTV 3065
Query: 246 NGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALY 305
+G+V++WG G G+LGH S + DK PR + AL I+D+ACG HS ALTS G LY
Sbjct: 3066 DGKVFSWGEGDDGKLGHFSRMNCDK---PRLIEALKTKRIRDIACGSSHSAALTSSGELY 3122
Query: 306 AWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGH--SHTLVYMRD 363
WG + G+LG G T L P + + +L+ +Q VACG + TL +
Sbjct: 3123 TWGLGEYGRLGHGDNTTQ--LKP-------KMVKVLLGHRVIQ-VACGSRDAQTLALTDE 3172
Query: 364 GRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVL 411
G + WG +G+ S P ++ G+ V ++ G S L
Sbjct: 3173 GLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLAL 3221
Score = 266 (98.7 bits), Expect = 1.1e-16, Sum P(3) = 1.1e-16
Identities = 87/307 (28%), Positives = 143/307 (46%)
Query: 20 KSAIYVWGYNHSGQTGR-KGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVA 78
++ ++VWG N Q G KG + +++P F A + + +A G + AV
Sbjct: 2959 RTKVFVWGLNDKDQLGGLKGSK--IKVPS------FSETLSALNV-VQVAGGSKSLFAVT 3009
Query: 79 SDGTLFTWGANEFGQLGDGTEEGRKH-PEKVKQLQSEFVKSI---SCGAHCTAAIAEPRE 134
+G +++ G G+LG G G P ++ L S VK + S G H TA + +
Sbjct: 3010 VEGKVYSCGEATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKV 3069
Query: 135 ND-GTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGY 193
G +L + + + PRL T I ++CGS H AL+ G L WG
Sbjct: 3070 FSWGEGDDGKLGHFSR-MNCDKPRLIEALKTKR--IRDIACGSSHSAALTSSGELYTWGL 3126
Query: 194 NEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCG--EYHSAAVSENGEVYT 251
EYG+LG G L+ P+++K L ++ QV+CG + + A+++ G V++
Sbjct: 3127 GEYGRLGHGDNTTQLK-PKMVK---VLLGH-----RVIQVACGSRDAQTLALTDEGLVFS 3177
Query: 252 WGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQ 311
WG G G+LG + + +P+ + L+G + + CG S ALT G ++ WG
Sbjct: 3178 WGDGDFGKLGRGGSEGCN---IPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGD 3234
Query: 312 AGQLGLG 318
+LG G
Sbjct: 3235 YFRLGHG 3241
Score = 249 (92.7 bits), Expect = 2.2e-28, Sum P(3) = 2.2e-28
Identities = 71/238 (29%), Positives = 115/238 (48%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHE--HT 74
+ + +Y WG G+ G QL+ PK + L G R + +ACG T
Sbjct: 3115 LTSSGELYTWGLGEYGRLGHGDNTTQLK-PKMVKV-LLG------HRVIQVACGSRDAQT 3166
Query: 75 AAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRE 134
A+ +G +F+WG +FG+LG G EG P+ +++L + V I CGA + A+ +
Sbjct: 3167 LALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTK--- 3223
Query: 135 NDGTISTSRLWVWGQNQ------GSNF----PRLFWGAFTPNTIICQVSCGSVHVVALSE 184
G + W WG+ GS+ P++ G I V+ G++H +A+++
Sbjct: 3224 -SGVV-----WTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKK--IVHVAVGALHCLAVTD 3275
Query: 185 CGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAA 242
G + AWG N++GQ G G T + P +++G E +KIT+V+CG HS A
Sbjct: 3276 SGQVYAWGDNDHGQQGNGTTTVNRK-PTLVQGL--------EGQKITRVACGSSHSVA 3324
Score = 231 (86.4 bits), Expect = 3.3e-13, Sum P(2) = 3.3e-13
Identities = 78/247 (31%), Positives = 113/247 (45%)
Query: 171 QVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKI 230
Q+ G + A++ G L A GY G+LG G T E + P +++ ++K+
Sbjct: 3991 QLIGGEQTLFAVTADGKLYATGYGAGGRLGIGGT-ESVSTPTLLESIQHVF-----IKKV 4044
Query: 231 TQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVAC 290
V+ G H A+S GEVY+WG G+LGH + D+ PR + +L GI + DVA
Sbjct: 4045 A-VNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDR---PRVIESLRGIEVVDVAA 4100
Query: 291 GGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVP-NGVQL 349
GG HS +T+ G LY WG + G+LG SD+ + P LV G ++
Sbjct: 4101 GGAHSACVTAAGDLYTWGKGRYGRLG-------------HSDSEDQLKPKLVEALQGHRV 4147
Query: 350 V--ACGH--SHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAG 404
+ ACG + TL D + WG YG+ S P +D G V K+ G
Sbjct: 4148 IDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECG 4207
Query: 405 GGHSAVL 411
S L
Sbjct: 4208 SQFSVAL 4214
Score = 228 (85.3 bits), Expect = 2.4e-12, Sum P(3) = 2.4e-12
Identities = 66/210 (31%), Positives = 98/210 (46%)
Query: 169 ICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELE 228
+ ++CGS + A++ G L WG YG+LG G + E P ++ G K L
Sbjct: 554 VVHIACGSTYSAAITAEGELYTWGRGNYGRLGHG-SSEDEAIPMLVAGL-KGL------- 604
Query: 229 KITQVSCG--EYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIK 286
K+ V+CG + + AV+ENG+V++WG G G+LG G K P+ + L + +
Sbjct: 605 KVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGG-SDGCKT--PKLIEKLQDLDVI 661
Query: 287 DVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNG 346
V CG S ALT G +Y+WG +LG G + E Y + + L
Sbjct: 662 KVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTE---------EHVRYPKLLEGLQGKKV 712
Query: 347 VQLVACGHSHTLVYMRDGRIHGWGYNSYGQ 376
+ VA G +H L D +H WG N Q
Sbjct: 713 ID-VAAGSTHCLALTEDSEVHSWGSNDQCQ 741
Score = 196 (74.1 bits), Expect = 2.3e-09, Sum P(2) = 2.3e-09
Identities = 52/185 (28%), Positives = 89/185 (48%)
Query: 229 KITQVSCG--EYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIK 286
++ QV+CG + + A+++ G V++WG G G+LG + + +P+ + L+G +
Sbjct: 3153 RVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCN---IPQNIERLNGQGVC 3209
Query: 287 DVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNG 346
+ CG S ALT G ++ WG +LG G SD + R ++ G
Sbjct: 3210 QIECGAQFSLALTKSGVVWTWGKGDYFRLGHG------------SDVHVRKPQVVEGLRG 3257
Query: 347 VQLV--ACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAA 403
++V A G H L G+++ WG N +GQ N +T P+ V G+ + ++A
Sbjct: 3258 KKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVAC 3317
Query: 404 GGGHS 408
G HS
Sbjct: 3318 GSSHS 3322
Score = 195 (73.7 bits), Expect = 3.0e-09, Sum P(2) = 3.0e-09
Identities = 73/255 (28%), Positives = 113/255 (44%)
Query: 169 ICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELE 228
+ QV+C + LS G + YN + P++++G A + +
Sbjct: 454 VMQVACAEKRFLILSRNGRVYTQAYNS-----------DMLAPQLVQGLA-----SRNIV 497
Query: 229 KITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELL--PRRVVALDGI--- 283
KI S G +H A++ GEVY+WG G G+LGH GD L P+ + A G
Sbjct: 498 KIAAHSDG-HHYLALAATGEVYSWGCGDGGRLGH-----GDTVPLEEPKVISAFSGKQAG 551
Query: 284 -FIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILV 342
+ +ACG +S A+T++G LY WG G+LG G +E + IP+LV
Sbjct: 552 KHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGS---------SEDEA----IPMLV 598
Query: 343 VP-NGVQL--VACGH--SHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG- 396
G+++ VACG + TL +G++ WG YG+ S P ++
Sbjct: 599 AGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL 658
Query: 397 EVRKLAAGGGHSAVL 411
+V K+ G S L
Sbjct: 659 DVIKVRCGSQFSIAL 673
Score = 176 (67.0 bits), Expect = 2.2e-28, Sum P(3) = 2.2e-28
Identities = 47/131 (35%), Positives = 64/131 (48%)
Query: 230 ITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVA 289
+ +V CG S A++++G VYTWG G +LGH S D PR+V L G + +A
Sbjct: 4201 VVKVECGSQFSVALTKSGAVYTWGKGDYHRLGH---GSDDHVRRPRQVQGLQGKKVIAIA 4257
Query: 290 CGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQL 349
G +H T G +Y WG + GQLG G T + P R + L V
Sbjct: 4258 TGSLHCVCCTEDGEVYTWGDNDEGQLGDGT-TNAIQR-P-------RLVAALQGKK-VNR 4307
Query: 350 VACGHSHTLVY 360
VACG +HTL +
Sbjct: 4308 VACGSAHTLAW 4318
Score = 166 (63.5 bits), Expect = 1.4e-05, Sum P(3) = 1.4e-05
Identities = 45/131 (34%), Positives = 64/131 (48%)
Query: 230 ITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVA 289
+ Q+ CG S A++++G V+TWG G +LGH S K P+ V L G I VA
Sbjct: 3208 VCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRK---PQVVEGLRGKKIVHVA 3264
Query: 290 CGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQL 349
G +H A+T G +YAWG + GQ G G T N T + + +
Sbjct: 3265 VGALHCLAVTDSGQVYAWGDNDHGQQGNGTTT------VNRKPTLVQGLE----GQKITR 3314
Query: 350 VACGHSHTLVY 360
VACG SH++ +
Sbjct: 3315 VACGSSHSVAW 3325
Score = 135 (52.6 bits), Expect = 3.7e-24, Sum P(3) = 3.7e-24
Identities = 51/173 (29%), Positives = 74/173 (42%)
Query: 246 NGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALY 305
+G +Y WG GQLG G K +P AL + + G A+T+ G LY
Sbjct: 3953 SGTIYGWGHNHRGQLGGIE---GAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLY 4009
Query: 306 AWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGR 365
A G G+LG+G T S S + T +I + + V G H L +G
Sbjct: 4010 ATGYGAGGRLGIGG-TESVS-----TPTLLESIQHVFIKKVA--VNSGGKHCLALSSEGE 4061
Query: 366 IHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLADACSL 417
++ WG G+ + + P ++ G EV +AAGG HSA + A L
Sbjct: 4062 VYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDL 4114
Score = 43 (20.2 bits), Expect = 2.2e-22, Sum P(3) = 2.2e-22
Identities = 5/12 (41%), Positives = 10/12 (83%)
Query: 360 YMRDGRIHGWGY 371
++ DG ++GWG+
Sbjct: 3693 FISDGSVNGWGW 3704
Score = 43 (20.2 bits), Expect = 1.0e-14, Sum P(3) = 1.0e-14
Identities = 20/47 (42%), Positives = 23/47 (48%)
Query: 253 GLGSV-GQL-GHCSLQSGDKELLPRRV--VALDGIFIKDVACGGVHS 295
G SV GQ+ S S D LLP RV V G + D CGG +S
Sbjct: 4441 GTKSVFGQMCAKMSSFSPDSLLLPHRVWKVKFVGESVDD--CGGGYS 4485
Score = 40 (19.1 bits), Expect = 2.3e-20, Sum P(2) = 2.3e-20
Identities = 14/48 (29%), Positives = 21/48 (43%)
Query: 424 RLAESVTLSNASEIEDVASRTGSEALA-RLCERLREHSLHGDEFDCDD 470
+L S T S ++ + + EA A LC+ L S H C+D
Sbjct: 2384 QLLSSAT--QPSPVKAIFDKQELEAAALALCQCLAVESTHPSSPGCED 2429
Score = 37 (18.1 bits), Expect = 2.2e-28, Sum P(3) = 2.2e-28
Identities = 6/12 (50%), Positives = 9/12 (75%)
Query: 404 GGGHSAVLADAC 415
GGG+S +A+ C
Sbjct: 4481 GGGYSESIAEIC 4492
Score = 37 (18.1 bits), Expect = 2.2e-28, Sum P(3) = 2.2e-28
Identities = 6/12 (50%), Positives = 10/12 (83%)
Query: 446 SEALARLCERLR 457
SE++A +CE L+
Sbjct: 4485 SESIAEICEELQ 4496
>UNIPROTKB|F1NCH3 [details] [associations]
symbol:HERC4 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0007283
"spermatogenesis" evidence=IEA] Pfam:PF00632 InterPro:IPR000569
PROSITE:PS50237 SMART:SM00119 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0016567 GO:GO:0005622 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 SUPFAM:SSF56204 GeneTree:ENSGT00660000095216
OMA:KLVIQPT EMBL:AADN02028016 IPI:IPI00586918
Ensembl:ENSGALT00000006135 ArrayExpress:F1NCH3 Uniprot:F1NCH3
Length = 1048
Score = 337 (123.7 bits), Expect = 5.1e-28, P = 5.1e-28
Identities = 93/294 (31%), Positives = 145/294 (49%)
Query: 26 WGYNHSGQTGRKGRERQLRI-PKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGTLF 84
WG GQ G G + ++ + P++ + F N R D+ CG HT V DGT++
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRK--SDFF-----LNKRIRDVGCGLRHTVFVLDDGTVY 56
Query: 85 TWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND--GTISTS 142
T G N+ GQLG E+ RK PE V L ++ + ++SCG T A+ + + G +
Sbjct: 57 TCGCNDLGQLGH--EKARKRPEHVGALDAQNIVAVSCGEAHTLALNDKGQVYAWGLATDG 114
Query: 143 RLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRG 202
+L + G + PR + + I+ QV+CG H +ALS+ + +WG N+YGQLG G
Sbjct: 115 QLGLPGTEECIRVPRNI-KSLSEIQIV-QVACGYYHSLALSKGSEVFSWGQNKYGQLGLG 172
Query: 203 ITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGH 262
+ P VIK L P Q++ G HS ++ +G ++ WG GQLG
Sbjct: 173 YEYKKQNSPHVIKS----LLGIP----FAQIAAGGAHSFVLTLSGAIFGWGRNKFGQLG- 223
Query: 263 CSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLG 316
L + +P + +L + + CG H+ ALT +G ++ +G GQLG
Sbjct: 224 --LNDDNDRYVPTLLKSLRTQKVVHICCGEDHTAALTKEGGVFTFGAGGYGQLG 275
Score = 315 (115.9 bits), Expect = 2.9e-25, P = 2.9e-25
Identities = 79/256 (30%), Positives = 124/256 (48%)
Query: 67 IACGHEHTAAVASDGTLFTWGANEFGQLG-DGTEEGRKHPEKVKQLQSEFVKSISCGAHC 125
++CG HT A+ G ++ WG GQLG GTEE + P +K L + ++CG +
Sbjct: 89 VSCGEAHTLALNDKGQVYAWGLATDGQLGLPGTEECIRVPRNIKSLSEIQIVQVACGYYH 148
Query: 126 TAAIAEPRE--NDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALS 183
+ A+++ E + G +L + + + N P + Q++ G H L+
Sbjct: 149 SLALSKGSEVFSWGQNKYGQLGLGYEYKKQNSPHVIKSLL--GIPFAQIAAGGAHSFVLT 206
Query: 184 ECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAV 243
G + WG N++GQLG R + K L +K+ + CGE H+AA+
Sbjct: 207 LSGAIFGWGRNKFGQLGLND-----DNDRYVPTLLKSL----RTQKVVHICCGEDHTAAL 257
Query: 244 SENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALT-SKG 302
++ G V+T+G G GQLGH S E+ PR+V L G + + CG H+ A S G
Sbjct: 258 TKEGGVFTFGAGGYGQLGH---NSTSHEINPRKVFELMGSLVTQITCGRQHTTAFVPSSG 314
Query: 303 ALYAWGGSQAGQLGLG 318
+Y++G GQLG G
Sbjct: 315 RIYSFGLGGNGQLGTG 330
Score = 313 (115.2 bits), Expect = 4.9e-25, P = 4.9e-25
Identities = 85/240 (35%), Positives = 120/240 (50%)
Query: 83 LFTWGANEFGQLGDG--TEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIS 140
+ WG FGQLG G EE P K ++ ++ + CG T + + DGT+
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFLNKRIRDVGCGLRHTVFVLD----DGTVY 56
Query: 141 T---SRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYG 197
T + L G + P GA I+ VSCG H +AL++ G + AWG G
Sbjct: 57 TCGCNDLGQLGHEKARKRPEHV-GALDAQNIVA-VSCGEAHTLALNDKGQVYAWGLATDG 114
Query: 198 QLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSV 257
QLG T E ++ PR IK ++ +I QV+CG YHS A+S+ EV++WG
Sbjct: 115 QLGLPGTEECIRVPRNIKSLSEI--------QIVQVACGYYHSLALSKGSEVFSWGQNKY 166
Query: 258 GQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGL 317
GQLG + K+ P + +L GI +A GG HS LT GA++ WG ++ GQLGL
Sbjct: 167 GQLG-LGYEY-KKQNSPHVIKSLLGIPFAQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGL 224
Score = 273 (101.2 bits), Expect = 1.9e-20, P = 1.9e-20
Identities = 86/225 (38%), Positives = 110/225 (48%)
Query: 191 WGYNEYGQLGRG-ITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEV 249
WG +GQLG G I E + PR + FL++ +I V CG H+ V ++G V
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRK-SDF--FLNK-----RIRDVGCGLRHTVFVLDDGTV 55
Query: 250 YTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGG 309
YT G +GQLGH + K P V ALD I V+CG H+ AL KG +YAWG
Sbjct: 56 YTCGCNDLGQLGH---EKARKR--PEHVGALDAQNIVAVSCGEAHTLALNDKGQVYAWGL 110
Query: 310 SQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGW 369
+ GQLGL P T +P RNI L VQ VACG+ H+L + + W
Sbjct: 111 ATDGQLGL-PGTEECIRVP-------RNIKSLSEIQIVQ-VACGYYHSLALSKGSEVFSW 161
Query: 370 GYNSYGQAANEKSTYAWYPSP--VDWCVG-EVRKLAAGGGHSAVL 411
G N YGQ Y SP + +G ++AAGG HS VL
Sbjct: 162 GQNKYGQLGLGYE-YKKQNSPHVIKSLLGIPFAQIAAGGAHSFVL 205
Score = 254 (94.5 bits), Expect = 2.5e-18, P = 2.5e-18
Identities = 70/236 (29%), Positives = 113/236 (47%)
Query: 178 HVVALSECGLLQAWGYNEYGQL-GRGITCEG---LQGPRVIKGYAKFLDEAPELEKITQV 233
++VA+S CG N+ GQ+ G+ +G L G + + E++ I QV
Sbjct: 85 NIVAVS-CGEAHTLALNDKGQVYAWGLATDGQLGLPGTEECIRVPRNIKSLSEIQ-IVQV 142
Query: 234 SCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGV 293
+CG YHS A+S+ EV++WG GQLG + K+ P + +L GI +A GG
Sbjct: 143 ACGYYHSLALSKGSEVFSWGQNKYGQLG-LGYEY-KKQNSPHVIKSLLGIPFAQIAAGGA 200
Query: 294 HSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACG 353
HS LT GA++ WG ++ GQLGL +++D Y + + V + CG
Sbjct: 201 HSFVLTLSGAIFGWGRNKFGQLGLN----------DDNDRYVPTLLKSLRTQKVVHICCG 250
Query: 354 HSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHS 408
HT ++G + +G YGQ + +++ P V +G V ++ G H+
Sbjct: 251 EDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSLVTQITCGRQHT 306
Score = 250 (93.1 bits), Expect = 7.0e-18, P = 7.0e-18
Identities = 77/255 (30%), Positives = 122/255 (47%)
Query: 20 KSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVAS 79
K +Y WG GQ G G E +R+P+ + L + + + +ACG+ H+ A++
Sbjct: 102 KGQVYAWGLATDGQLGLPGTEECIRVPRNIK-SL------SEIQIVQVACGYYHSLALSK 154
Query: 80 DGTLFTWGANEFGQLGDGTEEGRKH-PEKVKQLQS-EFVKSISCGAHCTAAIAEPRENDG 137
+F+WG N++GQLG G E +++ P +K L F + + GAH
Sbjct: 155 GSEVFSWGQNKYGQLGLGYEYKKQNSPHVIKSLLGIPFAQIAAGGAHSFVL--------- 205
Query: 138 TISTSRLWVWGQNQ----GSN------FPRLFWGAFTPNTIICQVSCGSVHVVALSECGL 187
T+S + ++ WG+N+ G N P L T + + CG H AL++ G
Sbjct: 206 TLSGA-IFGWGRNKFGQLGLNDDNDRYVPTLLKSLRTQKVV--HICCGEDHTAALTKEGG 262
Query: 188 LQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAA-VSEN 246
+ +G YGQLG T + PR K + L +TQ++CG H+ A V +
Sbjct: 263 VFTFGAGGYGQLGHNSTSHEIN-PR------KVFELMGSL--VTQITCGRQHTTAFVPSS 313
Query: 247 GEVYTWGLGSVGQLG 261
G +Y++GLG GQLG
Sbjct: 314 GRIYSFGLGGNGQLG 328
Score = 244 (91.0 bits), Expect = 3.2e-17, P = 3.2e-17
Identities = 63/191 (32%), Positives = 97/191 (50%)
Query: 224 APELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELL--PRRVVALD 281
A + + I VSCGE H+ A+++ G+VY WGL + GQLG G +E + PR + +L
Sbjct: 80 ALDAQNIVAVSCGEAHTLALNDKGQVYAWGLATDGQLG----LPGTEECIRVPRNIKSLS 135
Query: 282 GIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPIL 341
I I VACG HS AL+ +++WG ++ GQLGLG + + S +++ L
Sbjct: 136 EIQIVQVACGYYHSLALSKGSEVFSWGQNKYGQLGLGYEYKK-----QNSPHVIKSL--L 188
Query: 342 VVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWC-VGEVRK 400
+P +A G +H+ V G I GWG N +GQ + P+ + +V
Sbjct: 189 GIP--FAQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDDNDRYVPTLLKSLRTQKVVH 246
Query: 401 LAAGGGHSAVL 411
+ G H+A L
Sbjct: 247 ICCGEDHTAAL 257
Score = 199 (75.1 bits), Expect = 2.9e-12, P = 2.9e-12
Identities = 61/202 (30%), Positives = 94/202 (46%)
Query: 21 SAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASD 80
S ++ WG N GQ G G E + + + L G P + IA G H+ +
Sbjct: 156 SEVFSWGQNKYGQLGL-GYEYKKQNSPHVIKSLLGIP------FAQIAAGGAHSFVLTLS 208
Query: 81 GTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIS 140
G +F WG N+FGQLG + R P +K L+++ V I CG TAA+ + +G +
Sbjct: 209 GAIFGWGRNKFGQLGLNDDNDRYVPTLLKSLRTQKVVHICCGEDHTAALTK----EGGVF 264
Query: 141 TSRLWVWGQ---NQGSNF--PRLFWGAFTPNTIICQVSCGSVHVVA-LSECGLLQAWGYN 194
T +GQ N S+ PR + +++ Q++CG H A + G + ++G
Sbjct: 265 TFGAGGYGQLGHNSTSHEINPRKVFELM--GSLVTQITCGRQHTTAFVPSSGRIYSFGLG 322
Query: 195 EYGQLGRGITCEGLQGPRVIKG 216
GQLG G T + P +KG
Sbjct: 323 GNGQLGTGTT-SNRKSPFTVKG 343
Score = 155 (59.6 bits), Expect = 1.9e-07, P = 1.9e-07
Identities = 46/167 (27%), Positives = 75/167 (44%)
Query: 232 QVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACG 291
Q++ G HS ++ +G ++ WG GQLG L + +P + +L + + CG
Sbjct: 194 QIAAGGAHSFVLTLSGAIFGWGRNKFGQLG---LNDDNDRYVPTLLKSLRTQKVVHICCG 250
Query: 292 GVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVA 351
H+ ALT +G ++ +G GQLG + S + P + F + LV +
Sbjct: 251 EDHTAALTKEGGVFTFGAGGYGQLG--HNSTSHEINPRK---VFELMGSLVTQ-----IT 300
Query: 352 CGHSHTLVYM-RDGRIHGWGYNSYGQ-----AANEKSTYA----WYP 388
CG HT ++ GRI+ +G GQ +N KS + W P
Sbjct: 301 CGRQHTTAFVPSSGRIYSFGLGGNGQLGTGTTSNRKSPFTVKGNWLP 347
>FB|FBgn0031107 [details] [associations]
symbol:HERC2 "HECT and RLD domain containing protein 2
ortholog (H. sapiens)" species:7227 "Drosophila melanogaster"
[GO:0005085 "guanyl-nucleotide exchange factor activity"
evidence=NAS] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IBA;NAS] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0020037 "heme binding" evidence=IEA] [GO:0042787 "protein
ubiquitination involved in ubiquitin-dependent protein catabolic
process" evidence=IBA] [GO:0005737 "cytoplasm" evidence=IBA]
[GO:0005634 "nucleus" evidence=IBA] Pfam:PF00632 InterPro:IPR000569
InterPro:IPR001199 InterPro:IPR009060 InterPro:IPR010606
Pfam:PF00173 Pfam:PF06701 PROSITE:PS50237 PROSITE:PS51416
SMART:SM00119 UniPathway:UPA00143 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005634 GO:GO:0005737 GO:GO:0005814 GO:GO:0046872
EMBL:AE014298 GO:GO:0020037 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 InterPro:IPR015940 PROSITE:PS50030
InterPro:IPR008979 SUPFAM:SSF49785 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 InterPro:IPR004939
PROSITE:PS51284 InterPro:IPR000859 SUPFAM:SSF49854 GO:GO:0042787
SUPFAM:SSF46934 Gene3D:2.30.30.30 InterPro:IPR021097
InterPro:IPR014722 Pfam:PF11515 SUPFAM:SSF56204 eggNOG:COG5021
GeneTree:ENSGT00700000104208 EMBL:AY113293 EMBL:AF189221
RefSeq:NP_608388.2 UniGene:Dm.3302 ProteinModelPortal:Q9VR91
SMR:Q9VR91 IntAct:Q9VR91 STRING:Q9VR91 PaxDb:Q9VR91
EnsemblMetazoa:FBtr0301344 GeneID:33035 KEGG:dme:Dmel_CG11734
UCSC:CG11734-RB CTD:8924 FlyBase:FBgn0031107 InParanoid:Q9VR91
KO:K10595 OMA:QLAFTRD OrthoDB:EOG48GTJ3 PhylomeDB:Q9VR91
GenomeRNAi:33035 NextBio:781623 Bgee:Q9VR91 GermOnline:CG11734
Uniprot:Q9VR91
Length = 4912
Score = 324 (119.1 bits), Expect = 4.7e-26, Sum P(3) = 4.7e-26
Identities = 94/302 (31%), Positives = 150/302 (49%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+Y G +G+ G G + +P QLP L + + + G +H A+ DG
Sbjct: 3040 VYACGEGTNGRLGL-GVTHNVPLPHQLPV-LRQYVV----KKVAVHSGGKHALALTLDGK 3093
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
+F+WG E G+LG G P V+ L+++ ++ ++CG+ +AAI+ + G + T
Sbjct: 3094 VFSWGEGEDGKLGHGNRTTLDKPRLVEALRAKKIRDVACGSSHSAAIS----SQGELYTW 3149
Query: 143 RLWVWGQ-NQGSNFPRLFWGAFTP--NTIICQVSCGS--VHVVALSECGLLQAWGYNEYG 197
L +G+ G N +L T + QV+CGS +AL+E G + +WG ++G
Sbjct: 3150 GLGEYGRLGHGDNTTQLKPKLVTALAGRRVVQVACGSRDAQTLALTEDGAVFSWGDGDFG 3209
Query: 198 QLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSV 257
+LGRG + EG P I+ + + Q+ CG S A++ GEV+TWG G
Sbjct: 3210 KLGRGGS-EGSDTPHEIERLSGI--------GVVQIECGAQFSLALTRAGEVWTWGKGDY 3260
Query: 258 GQLGHCSLQSGDKELL-PRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLG 316
+LGH GD+ + P+ + L G + VA G +H A+T G +YAWG + GQ G
Sbjct: 3261 YRLGH----GGDQHVRKPQPIGGLRGRRVIHVAVGALHCLAVTDAGQVYAWGDNDHGQQG 3316
Query: 317 LG 318
G
Sbjct: 3317 SG 3318
Score = 308 (113.5 bits), Expect = 4.3e-22, Sum P(2) = 4.3e-22
Identities = 93/304 (30%), Positives = 139/304 (45%)
Query: 21 SAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASD 80
S IY WG+NH GQ G G E RI P C A + R + +A G + AV D
Sbjct: 4049 STIYGWGHNHRGQLG--GLEGS-RIKTPTP-----CEALSLLRPVQLAGGEQSLFAVTPD 4100
Query: 81 GTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSI---SCGAHCTAAIAEPREND- 136
G LF G G+LG G + P + LQ FVK + S G HC A E
Sbjct: 4101 GKLFATGYGSGGRLGVGGSDSWAIPTLLGSLQHVFVKKVAVNSGGKHCLALTTEGEVYAW 4160
Query: 137 GTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEY 196
G +L G + P+L + ++CGS H A++ G + WG Y
Sbjct: 4161 GEGEDGKLG-HGNRMSYDRPKLV--EHLNGMSVADIACGSAHSAAITASGHVLTWGKGRY 4217
Query: 197 GQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCG--EYHSAAVSENGEVYTWGL 254
G+LG G + + L+ P++++ + + ++CG + + ++++ V++WG
Sbjct: 4218 GRLGHGDSEDQLR-PKLVEALLGY--------RAIDIACGSGDAQTLCITDDDNVWSWGD 4268
Query: 255 GSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQ 314
G G+LG G K LP ++ +L G+ + V CG S ALT GA+Y WG +
Sbjct: 4269 GDYGKLGRGG-SDGCK--LPYKIESLAGLGVVKVECGSQFSVALTKSGAVYTWGKGDFHR 4325
Query: 315 LGLG 318
LG G
Sbjct: 4326 LGHG 4329
Score = 304 (112.1 bits), Expect = 1.3e-21, Sum P(2) = 1.3e-21
Identities = 89/303 (29%), Positives = 138/303 (45%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ GY G+ G G + P L G + + + G +H A+ ++G
Sbjct: 4103 LFATGYGSGGRLGVGGSD------SWAIPTLLGSLQHVFVKKVAVNSGGKHCLALTTEGE 4156
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCG-AHCTAAIAEPREND-GTIS 140
++ WG E G+LG G P+ V+ L V I+CG AH A A G
Sbjct: 4157 VYAWGEGEDGKLGHGNRMSYDRPKLVEHLNGMSVADIACGSAHSAAITASGHVLTWGKGR 4216
Query: 141 TSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGS--VHVVALSECGLLQAWGYNEYGQ 198
RL G ++ P+L I ++CGS + +++ + +WG +YG+
Sbjct: 4217 YGRLG-HGDSEDQLRPKLVEALLGYRAI--DIACGSGDAQTLCITDDDNVWSWGDGDYGK 4273
Query: 199 LGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVG 258
LGRG + +G + P I+ A + +V CG S A++++G VYTWG G
Sbjct: 4274 LGRGGS-DGCKLPYKIESLAGL--------GVVKVECGSQFSVALTKSGAVYTWGKGDFH 4324
Query: 259 QLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLG 318
+LGH S+ D P++V AL G I +A G +H A + G +Y WG + GQLG G
Sbjct: 4325 RLGHGSV---DHVRRPKKVAALQGKKIISIATGSLHCVACSDSGEVYTWGDNDEGQLGDG 4381
Query: 319 PQT 321
T
Sbjct: 4382 TVT 4384
Score = 303 (111.7 bits), Expect = 1.8e-21, Sum P(2) = 1.8e-21
Identities = 87/292 (29%), Positives = 134/292 (45%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
+ + +Y WG G+ G R R PK L L G DIACG H+AA
Sbjct: 4151 LTTEGEVYAWGEGEDGKLGHGNRMSYDR-PK-LVEHLNGMSVA------DIACGSAHSAA 4202
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND 136
+ + G + TWG +G+LG G E + P+ V+ L I+CG+ + +++
Sbjct: 4203 ITASGHVLTWGKGRYGRLGHGDSEDQLRPKLVEALLGYRAIDIACGSGDAQTLCITDDDN 4262
Query: 137 GTISTSRLWVWGQNQGSNFPRLFW-GAFTPNTI-------ICQVSCGSVHVVALSECGLL 188
+W WG R G P I + +V CGS VAL++ G +
Sbjct: 4263 -------VWSWGDGDYGKLGRGGSDGCKLPYKIESLAGLGVVKVECGSQFSVALTKSGAV 4315
Query: 189 QAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGE 248
WG ++ +LG G + + ++ P+ + A + +KI ++ G H A S++GE
Sbjct: 4316 YTWGKGDFHRLGHG-SVDHVRRPKKVA--------ALQGKKIISIATGSLHCVACSDSGE 4366
Query: 249 VYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTS 300
VYTWG GQLG ++ + + PR V AL G I V CG H+ AL++
Sbjct: 4367 VYTWGDNDEGQLGDGTVTAIQR---PRLVAALQGKHIVKVTCGSAHTLALST 4415
Score = 298 (110.0 bits), Expect = 1.7e-22, Sum P(3) = 1.7e-22
Identities = 84/283 (29%), Positives = 129/283 (45%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ WG G+ G+ G + + K P L R D+ACG H+AA++S G
Sbjct: 3094 VFSWG---EGEDGKLGHGNRTTLDK---PRLVEALRAKKIR--DVACGSSHSAAISSQGE 3145
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
L+TWG E+G+LG G + P+ V L V ++CG+ +A DG + +
Sbjct: 3146 LYTWGLGEYGRLGHGDNTTQLKPKLVTALAGRRVVQVACGSRDAQTLA--LTEDGAVFS- 3202
Query: 143 RLWVWGQNQGSNFPRL-FWGAFTPNTI-------ICQVSCGSVHVVALSECGLLQAWGYN 194
WG R G+ TP+ I + Q+ CG+ +AL+ G + WG
Sbjct: 3203 ----WGDGDFGKLGRGGSEGSDTPHEIERLSGIGVVQIECGAQFSLALTRAGEVWTWGKG 3258
Query: 195 EYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGL 254
+Y +LG G + ++ P+ I G ++ V+ G H AV++ G+VY WG
Sbjct: 3259 DYYRLGHGGD-QHVRKPQPIGGLRG--------RRVIHVAVGALHCLAVTDAGQVYAWGD 3309
Query: 255 GSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCA 297
GQ G + K P V+ LD +F+ VACG HS A
Sbjct: 3310 NDHGQQGSGNTFVNKK---PALVIGLDAVFVNRVACGSSHSIA 3349
Score = 269 (99.8 bits), Expect = 5.8e-19, Sum P(3) = 5.8e-19
Identities = 91/315 (28%), Positives = 138/315 (43%)
Query: 11 ARPVDNIPAKSAIYVWGYNHSGQTGR-KGRERQLRIPKQLPPELFGCPAGANSRWLDIAC 69
A P ++P + VWG N Q G KG + +++P F + R + IA
Sbjct: 2978 AAPEQDLPC--TVMVWGLNDKEQLGGLKGSK--VKVPT------FSQTI-SRLRPIHIAG 3026
Query: 70 GHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSI---SCGAHCT 126
G + V+ DG ++ G G+LG G P ++ L+ VK + S G H
Sbjct: 3027 GSKSLFIVSQDGKVYACGEGTNGRLGLGVTHNVPLPHQLPVLRQYVVKKVAVHSGGKHAL 3086
Query: 127 AAIAEPREND-GTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSEC 185
A + + G +L G + PRL I V+CGS H A+S
Sbjct: 3087 ALTLDGKVFSWGEGEDGKLG-HGNRTTLDKPRLVEALRAKK--IRDVACGSSHSAAISSQ 3143
Query: 186 GLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCG--EYHSAAV 243
G L WG EYG+LG G L+ P+++ A ++ QV+CG + + A+
Sbjct: 3144 GELYTWGLGEYGRLGHGDNTTQLK-PKLVTALAG--------RRVVQVACGSRDAQTLAL 3194
Query: 244 SENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGA 303
+E+G V++WG G G+LG + D P + L GI + + CG S ALT G
Sbjct: 3195 TEDGAVFSWGDGDFGKLGRGGSEGSDT---PHEIERLSGIGVVQIECGAQFSLALTRAGE 3251
Query: 304 LYAWGGSQAGQLGLG 318
++ WG +LG G
Sbjct: 3252 VWTWGKGDYYRLGHG 3266
Score = 265 (98.3 bits), Expect = 1.7e-18, Sum P(3) = 1.7e-18
Identities = 77/261 (29%), Positives = 122/261 (46%)
Query: 60 ANSRWLDIA--CGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVK 117
A+ ++ IA C H A+ S+ ++WG E +LG G R P K+ L+ V+
Sbjct: 612 AHDVFISIAGHCEGRHFLAIDSNHNAYSWGTGEDHRLGHGDTHARAVPTKIAALEQHCVQ 671
Query: 118 SISCGAHCTAAIAEPRE--NDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCG 175
S+ CG +AAI G + +RL G + + P L + + G
Sbjct: 672 SVYCGCSYSAAITCGGNLLTWGRGTYARLG-HGNSDDRSLPTLVVALSDHMVVDVALGSG 730
Query: 176 SVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSC 235
H +AL+ GL+ AWG +YG+LG G C G P +++ L ++ +V
Sbjct: 731 DAHSLALTSEGLVFAWGDGDYGKLGNG-NCNGSLQPILVES----------LPRVQRVFA 779
Query: 236 GEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKEL-LPRRVVALDGIFIKDVACGGVH 294
G S A+S G++YTWG + LGH ++ + +PR V +L I DVA H
Sbjct: 780 GSQFSVALSSEGQLYTWGKATC--LGHQLVERSVQGCSVPRLVSSLQHKRIVDVAVSVAH 837
Query: 295 SCALTSKGALYAWGGSQAGQL 315
AL+S G ++ WG + + Q+
Sbjct: 838 CLALSSSGEVFGWGRNDSQQI 858
Score = 260 (96.6 bits), Expect = 4.6e-16, Sum P(3) = 4.6e-16
Identities = 71/199 (35%), Positives = 96/199 (48%)
Query: 221 LDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDK--ELLPRRVV 278
L EA +KI V+CG HSAA+S GE+YTWGLG G+LGH GD +L P+ V
Sbjct: 3118 LVEALRAKKIRDVACGSSHSAAISSQGELYTWGLGEYGRLGH-----GDNTTQLKPKLVT 3172
Query: 279 ALDGIFIKDVACGG--VHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFR 336
AL G + VACG + ALT GA+++WG G+LG G S + P+E +
Sbjct: 3173 ALAGRRVVQVACGSRDAQTLALTEDGAVFSWGDGDFGKLGRGGSEGSDT--PHEIER-LS 3229
Query: 337 NIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG 396
I GV + CG +L R G + WG Y + + + P P+ G
Sbjct: 3230 GI-------GVVQIECGAQFSLALTRAGEVWTWGKGDYYRLGHGGDQHVRKPQPIGGLRG 3282
Query: 397 E-VRKLAAGGGHSAVLADA 414
V +A G H + DA
Sbjct: 3283 RRVIHVAVGALHCLAVTDA 3301
Score = 240 (89.5 bits), Expect = 9.0e-14, Sum P(3) = 9.0e-14
Identities = 77/246 (31%), Positives = 120/246 (48%)
Query: 172 VSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKIT 231
++ GS + +S+ G + A G G+LG G+T + P + +++ ++K+
Sbjct: 3024 IAGGSKSLFIVSQDGKVYACGEGTNGRLGLGVT-HNVPLPHQLPVLRQYV-----VKKVA 3077
Query: 232 QVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACG 291
V G H+ A++ +G+V++WG G G+LGH + + DK PR V AL I+DVACG
Sbjct: 3078 -VHSGGKHALALTLDGKVFSWGEGEDGKLGHGNRTTLDK---PRLVEALRAKKIRDVACG 3133
Query: 292 GVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVA 351
HS A++S+G LY WG + G+LG G T L P + + L VQ VA
Sbjct: 3134 SSHSAAISSQGELYTWGLGEYGRLGHGDNTTQ--LKP-------KLVTALAGRRVVQ-VA 3183
Query: 352 CGH--SHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHS 408
CG + TL DG + WG +G+ S + P ++ G V ++ G S
Sbjct: 3184 CGSRDAQTLALTEDGAVFSWGDGDFGKLGRGGSEGSDTPHEIERLSGIGVVQIECGAQFS 3243
Query: 409 AVLADA 414
L A
Sbjct: 3244 LALTRA 3249
Score = 234 (87.4 bits), Expect = 5.5e-28, Sum P(3) = 5.5e-28
Identities = 71/230 (30%), Positives = 109/230 (47%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHE--HT 74
I ++ +Y WG G+ G QL+ P+L AG R + +ACG T
Sbjct: 3140 ISSQGELYTWGLGEYGRLGHGDNTTQLK------PKLVTALAGR--RVVQVACGSRDAQT 3191
Query: 75 AAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRE 134
A+ DG +F+WG +FG+LG G EG P ++++L V I CGA + A+ E
Sbjct: 3192 LALTEDGAVFSWGDGDFGKLGRGGSEGSDTPHEIERLSGIGVVQIECGAQFSLALTRAGE 3251
Query: 135 --NDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWG 192
G RL G +Q P+ G +I V+ G++H +A+++ G + AWG
Sbjct: 3252 VWTWGKGDYYRLG-HGGDQHVRKPQPI-GGLRGRRVI-HVAVGALHCLAVTDAGQVYAWG 3308
Query: 193 YNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAA 242
N++GQ G G T + P ++ G LD + +V+CG HS A
Sbjct: 3309 DNDHGQQGSGNTFVNKK-PALVIG----LDAV----FVNRVACGSSHSIA 3349
Score = 221 (82.9 bits), Expect = 1.2e-11, Sum P(3) = 1.2e-11
Identities = 70/244 (28%), Positives = 111/244 (45%)
Query: 171 QVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKI 230
Q++ G + A++ G L A GY G+LG G + + P ++ ++K+
Sbjct: 4086 QLAGGEQSLFAVTPDGKLFATGYGSGGRLGVGGS-DSWAIPTLLGSLQHVF-----VKKV 4139
Query: 231 TQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVAC 290
V+ G H A++ GEVY WG G G+LGH + S D+ P+ V L+G+ + D+AC
Sbjct: 4140 A-VNSGGKHCLALTTEGEVYAWGEGEDGKLGHGNRMSYDR---PKLVEHLNGMSVADIAC 4195
Query: 291 GGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLV 350
G HS A+T+ G + WG + G+LG G +E + + L+ + +
Sbjct: 4196 GSAHSAAITASGHVLTWGKGRYGRLGHGD---------SEDQLRPKLVEALLGYRAID-I 4245
Query: 351 ACGH--SHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGH 407
ACG + TL D + WG YG+ S P ++ G V K+ G
Sbjct: 4246 ACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDGCKLPYKIESLAGLGVVKVECGSQF 4305
Query: 408 SAVL 411
S L
Sbjct: 4306 SVAL 4309
Score = 196 (74.1 bits), Expect = 1.4e-10, Sum P(4) = 1.4e-10
Identities = 66/199 (33%), Positives = 92/199 (46%)
Query: 174 CGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQV 233
C H +A+ +WG E +LG G T R + K A E + V
Sbjct: 623 CEGRHFLAIDSNHNAYSWGTGEDHRLGHGDT-----HARAVP--TKIA--ALEQHCVQSV 673
Query: 234 SCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGG- 292
CG +SAA++ G + TWG G+ +LGH + S D+ L P VVAL + DVA G
Sbjct: 674 YCGCSYSAAITCGGNLLTWGRGTYARLGHGN--SDDRSL-PTLVVALSDHMVVDVALGSG 730
Query: 293 -VHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVA 351
HS ALTS+G ++AWG G+LG G S I ES +P VQ V
Sbjct: 731 DAHSLALTSEGLVFAWGDGDYGKLGNGNCNGSLQPILVES-----------LPR-VQRVF 778
Query: 352 CGHSHTLVYMRDGRIHGWG 370
G ++ +G+++ WG
Sbjct: 779 AGSQFSVALSSEGQLYTWG 797
Score = 189 (71.6 bits), Expect = 5.5e-28, Sum P(3) = 5.5e-28
Identities = 52/190 (27%), Positives = 86/190 (45%)
Query: 230 ITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKE--LLPRRVVALDGIFIKD 287
+ ++CG HSAA++ +G V TWG G G+LGH GD E L P+ V AL G D
Sbjct: 4190 VADIACGSAHSAAITASGHVLTWGKGRYGRLGH-----GDSEDQLRPKLVEALLGYRAID 4244
Query: 288 VACGG--VHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPN 345
+ACG + +T +++WG G+LG G +P + ++ +
Sbjct: 4245 IACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDGC--KLPYKIES--------LAGL 4294
Query: 346 GVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAG 404
GV V CG ++ + G ++ WG + + + + P V G+ + +A G
Sbjct: 4295 GVVKVECGSQFSVALTKSGAVYTWGKGDFHRLGHGSVDHVRRPKKVAALQGKKIISIATG 4354
Query: 405 GGHSAVLADA 414
H +D+
Sbjct: 4355 SLHCVACSDS 4364
Score = 174 (66.3 bits), Expect = 1.6e-06, Sum P(3) = 1.6e-06
Identities = 56/198 (28%), Positives = 89/198 (44%)
Query: 229 KITQVSCG--EYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIK 286
++ QV+CG + + A++E+G V++WG G G+LG + D P + L GI +
Sbjct: 3178 RVVQVACGSRDAQTLALTEDGAVFSWGDGDFGKLGRGGSEGSDT---PHEIERLSGIGVV 3234
Query: 287 DVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNG 346
+ CG S ALT G ++ WG +LG G D + R + G
Sbjct: 3235 QIECGAQFSLALTRAGEVWTWGKGDYYRLGHG------------GDQHVRKPQPIGGLRG 3282
Query: 347 VQL--VACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAA 403
++ VA G H L G+++ WG N +GQ + + P+ V V ++A
Sbjct: 3283 RRVIHVAVGALHCLAVTDAGQVYAWGDNDHGQQGSGNTFVNKKPALVIGLDAVFVNRVAC 3342
Query: 404 GGGHSAV--LADACSLKE 419
G HS L +A S +E
Sbjct: 3343 GSSHSIAWGLPNASSDEE 3360
Score = 171 (65.3 bits), Expect = 3.4e-06, Sum P(3) = 3.4e-06
Identities = 51/183 (27%), Positives = 79/183 (43%)
Query: 235 CGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVH 294
C H A+ N Y+WG G +LGH + +P ++ AL+ ++ V CG +
Sbjct: 623 CEGRHFLAIDSNHNAYSWGTGEDHRLGHGDTHA---RAVPTKIAALEQHCVQSVYCGCSY 679
Query: 295 SCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVA--- 351
S A+T G L WG +LG G N D R++P LVV +V
Sbjct: 680 SAAITCGGNLLTWGRGTYARLGHG----------NSDD---RSLPTLVVALSDHMVVDVA 726
Query: 352 --CGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSA 409
G +H+L +G + WG YG+ N + P V+ + V+++ AG S
Sbjct: 727 LGSGDAHSLALTSEGLVFAWGDGDYGKLGNGNCNGSLQPILVE-SLPRVQRVFAGSQFSV 785
Query: 410 VLA 412
L+
Sbjct: 786 ALS 788
Score = 162 (62.1 bits), Expect = 3.4e-25, Sum P(3) = 3.4e-25
Identities = 50/185 (27%), Positives = 82/185 (44%)
Query: 233 VSCG--EYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVAC 290
++CG + + ++++ V++WG G G+LG G K LP ++ +L G+ + V C
Sbjct: 4245 IACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGG-SDGCK--LPYKIESLAGLGVVKVEC 4301
Query: 291 GGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLV 350
G S ALT GA+Y WG +LG G S + R + G +++
Sbjct: 4302 GSQFSVALTKSGAVYTWGKGDFHRLGHG------------SVDHVRRPKKVAALQGKKII 4349
Query: 351 --ACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGH 407
A G H + G ++ WG N GQ + T P V G+ + K+ G H
Sbjct: 4350 SIATGSLHCVACSDSGEVYTWGDNDEGQLGDGTVTAIQRPRLVAALQGKHIVKVTCGSAH 4409
Query: 408 SAVLA 412
+ L+
Sbjct: 4410 TLALS 4414
Score = 162 (62.1 bits), Expect = 4.9e-07, Sum P(3) = 4.9e-07
Identities = 63/240 (26%), Positives = 98/240 (40%)
Query: 67 IACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCT 126
+ CG ++AA+ G L TWG + +LG G + R P V L V ++ G+
Sbjct: 673 VYCGCSYSAAITCGGNLLTWGRGTYARLGHGNSDDRSLPTLVVALSDHMVVDVALGSGDA 732
Query: 127 AAIAEPRENDGTISTSRLWVWGQNQ-GSNFPRLFWGAFTPNTI-----ICQVSCGSVHVV 180
++A E G + + WG G G+ P + + +V GS V
Sbjct: 733 HSLALTSE--GLV-----FAWGDGDYGKLGNGNCNGSLQPILVESLPRVQRVFAGSQFSV 785
Query: 181 ALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHS 240
ALS G L WG + LG + +QG V + L + + ++I V+ H
Sbjct: 786 ALSSEGQLYTWG--KATCLGHQLVERSVQGCSVPR-----LVSSLQHKRIVDVAVSVAHC 838
Query: 241 AAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRV-VALDGIFIKDVACGGVHSCALT 299
A+S +GEV+ WG Q+ C + LL + V+L +AC S T
Sbjct: 839 LALSSSGEVFGWGRNDSQQI--CPASVSSEPLLRTPILVSLPTFPASGIACTSAQSLVWT 896
Score = 62 (26.9 bits), Expect = 4.7e-26, Sum P(3) = 4.7e-26
Identities = 13/47 (27%), Positives = 24/47 (51%)
Query: 366 IHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLA 412
I+GWG+N GQ + + P+P + + +R + GG ++ A
Sbjct: 4051 IYGWGHNHRGQLGGLEGSRIKTPTPCE-ALSLLRPVQLAGGEQSLFA 4096
Score = 44 (20.5 bits), Expect = 4.6e-16, Sum P(3) = 4.6e-16
Identities = 16/49 (32%), Positives = 22/49 (44%)
Query: 151 QG-SNFPRLFWGAFTPN--TIIC-----QVSCGSVHVVALSECGLLQAW 191
QG S P L W + T+ C QV+C ++ LS+ G L W
Sbjct: 548 QGFSAEPTLSWSGESAGVPTLSCRFQIKQVACCETQMLILSQEGKLYTW 596
Score = 37 (18.1 bits), Expect = 5.5e-28, Sum P(3) = 5.5e-28
Identities = 6/12 (50%), Positives = 9/12 (75%)
Query: 404 GGGHSAVLADAC 415
GGG+S +A+ C
Sbjct: 4568 GGGYSESIAEMC 4579
Score = 37 (18.1 bits), Expect = 5.5e-28, Sum P(3) = 5.5e-28
Identities = 6/16 (37%), Positives = 12/16 (75%)
Query: 446 SEALARLCERLREHSL 461
SE++A +C+ L+ S+
Sbjct: 4572 SESIAEMCDELQNGSV 4587
Score = 37 (18.1 bits), Expect = 1.8e-23, Sum P(3) = 1.8e-23
Identities = 6/24 (25%), Positives = 12/24 (50%)
Query: 360 YMRDGRIHGWGYNSYGQAANEKST 383
+ D ++GWG+ + A +T
Sbjct: 3737 FSSDSSVNGWGWRFWVHAIMPAAT 3760
Score = 37 (18.1 bits), Expect = 5.2e-17, Sum P(2) = 5.2e-17
Identities = 8/17 (47%), Positives = 10/17 (58%)
Query: 452 LCERLREHSLHGD-EFD 467
L RL E +HG+ E D
Sbjct: 1682 LLRRLNERQIHGEGELD 1698
Score = 37 (18.1 bits), Expect = 6.1e-16, Sum P(3) = 6.1e-16
Identities = 6/11 (54%), Positives = 9/11 (81%)
Query: 391 VDWCVGEVRKL 401
+DW V E+R+L
Sbjct: 1807 LDWAVRELRRL 1817
>UNIPROTKB|Q9UGK8 [details] [associations]
symbol:SERGEF "Secretion-regulating guanine nucleotide
exchange factor" species:9606 "Homo sapiens" [GO:0005087 "Ran
guanyl-nucleotide exchange factor activity" evidence=TAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0007165 "signal transduction" evidence=TAS]
[GO:0005634 "nucleus" evidence=IDA] [GO:0050709 "negative
regulation of protein secretion" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0045111 "intermediate filament
cytoskeleton" evidence=IDA] InterPro:IPR027048 INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005737 GO:GO:0007165 GO:GO:0005730
GO:GO:0045111 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
GO:GO:0005087 PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626
PROSITE:PS50012 GO:GO:0050709 eggNOG:COG5184 CTD:26297
HOGENOM:HOG000154414 HOVERGEN:HBG051746 KO:K15421 OMA:NIWAPKP
OrthoDB:EOG4J1183 PANTHER:PTHR22870:SF7 EMBL:AJ243950 EMBL:AJ243951
EMBL:BC065375 IPI:IPI00015919 IPI:IPI00383576 RefSeq:NP_036271.1
UniGene:Hs.32470 ProteinModelPortal:Q9UGK8 SMR:Q9UGK8 IntAct:Q9UGK8
STRING:Q9UGK8 PhosphoSite:Q9UGK8 DMDM:38257790 PaxDb:Q9UGK8
PeptideAtlas:Q9UGK8 PRIDE:Q9UGK8 Ensembl:ENST00000265965
Ensembl:ENST00000528200 GeneID:26297 KEGG:hsa:26297 UCSC:uc001mnm.3
UCSC:uc001mnn.3 GeneCards:GC11M017767 HGNC:HGNC:17499 HPA:HPA037811
MIM:606051 neXtProt:NX_Q9UGK8 PharmGKB:PA143485610
InParanoid:Q9UGK8 PhylomeDB:Q9UGK8 GenomeRNAi:26297 NextBio:48643
ArrayExpress:Q9UGK8 Bgee:Q9UGK8 CleanEx:HS_SERGEF
Genevestigator:Q9UGK8 GermOnline:ENSG00000129158 Uniprot:Q9UGK8
Length = 458
Score = 322 (118.4 bits), Expect = 1.4e-27, P = 1.4e-27
Identities = 127/471 (26%), Positives = 192/471 (40%)
Query: 18 PAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAV 77
PA +A++ WG N GQ G G + + +P+QL F C + R I G H+A V
Sbjct: 12 PAAAALFAWGANSYGQLGL-GHKEDVLLPQQLND--F-CKPRSVRR---ITGGGGHSAVV 64
Query: 78 ASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRE--N 135
G LF G N+ GQLG G E + K L ++ ++CG T + E + +
Sbjct: 65 TDGGDLFVCGLNKDGQLGLGHTEDIPYFTPCKSLFGCPIQQVACGWDFTIMLTENGQVLS 124
Query: 136 DGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNE 195
G+ S +L V + P+ ++C ++ G H VA + G++ WG
Sbjct: 125 CGSNSFGQLGVPHGPRRCVVPQAI--ELHKEKVVC-IAAGLRHAVAATASGIVFQWGTG- 180
Query: 196 YGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLG 255
GR + C G P E K V G HSA++++ GEVY WG
Sbjct: 181 LASCGRRL-CPGQTLPLFFTAKEPSRVTGLENSKAMCVLAGSDHSASLTDAGEVYVWGSN 239
Query: 256 SVGQLGHCSLQSGDKELLPRRVVA--LDGIFIKDVACGGVHSCALTSKGALYAWGGSQAG 313
GQL + ++ + P+++ A + + G H A T G ++ WG + G
Sbjct: 240 KHGQLAN---EAAFLPV-PQKIEAHCFQNEKVTAIWSGWTHLVAQTETGKMFTWGRADYG 295
Query: 314 QLGLGPQT-RSFSLIPNESDTYFR-NIPILVVPN------GVQLVACGHSHTLVYMRDGR 365
QLG +T + L + D++ + P +P+ G V+CG H L + G
Sbjct: 296 QLGRKLETYEGWKL--EKQDSFLPCSRPPNSMPSSPHCLTGATEVSCGSEHNLAII-GGV 352
Query: 366 IHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAA-GGGHSAVLADACSLKELCEFR 424
+ WG+N +G + W P PV + L G GHS L C L
Sbjct: 353 CYSWGWNEHGMCGDGTEANVWAPKPVQALLSSSGLLVGCGAGHSLAL---CQLPAHPALV 409
Query: 425 LAESVTLSNASEIEDVASRTGSEALARLCERLREHSLHGDEFDCDDDTRNG 475
VT + IED S+ + ER E S D +RNG
Sbjct: 410 QDPKVTYLSPDAIEDTESQKAMDKERNWKERQSETSTQSQS----DWSRNG 456
Score = 238 (88.8 bits), Expect = 2.8e-17, P = 2.8e-17
Identities = 93/328 (28%), Positives = 144/328 (43%)
Query: 76 AVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQL-QSEFVKSISCGAHCTAAIAEPRE 134
A + LF WGAN +GQLG G +E P+++ + V+ I+ G +A + +
Sbjct: 10 AAPAAAALFAWGANSYGQLGLGHKEDVLLPQQLNDFCKPRSVRRITGGGGHSAVVTD--- 66
Query: 135 NDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTII--C---QVSCGSVHVVALSECGLLQ 189
G + L GQ + + + FTP + C QV+CG + L+E G +
Sbjct: 67 -GGDLFVCGLNKDGQLGLGHTEDIPY--FTPCKSLFGCPIQQVACGWDFTIMLTENGQVL 123
Query: 190 AWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPEL--EKITQVSCGEYHSAAVSENG 247
+ G N +GQLG GPR + +A EL EK+ ++ G H+ A + +G
Sbjct: 124 SCGSNSFGQLGVP------HGPRRC-----VVPQAIELHKEKVVCIAAGLRHAVAATASG 172
Query: 248 EVYTWGLGSVGQLGH--CSLQS-----GDKELLPRRVVALDGIFIKDVACGGVHSCALTS 300
V+ WG G + G C Q+ KE P RV L+ V G HS +LT
Sbjct: 173 IVFQWGTG-LASCGRRLCPGQTLPLFFTAKE--PSRVTGLENSKAMCVLAGSDHSASLTD 229
Query: 301 KGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTY-FRNIPILVVPNGVQLVACGHSHTLV 359
G +Y WG ++ GQL +F +P + + + F+N V + G +H +
Sbjct: 230 AGEVYVWGSNKHGQLA---NEAAFLPVPQKIEAHCFQN-------EKVTAIWSGWTHLVA 279
Query: 360 YMRDGRIHGWGYNSYGQAANEKSTY-AW 386
G++ WG YGQ + TY W
Sbjct: 280 QTETGKMFTWGRADYGQLGRKLETYEGW 307
Score = 161 (61.7 bits), Expect = 1.2e-08, P = 1.2e-08
Identities = 72/273 (26%), Positives = 114/273 (41%)
Query: 131 EPRENDGTISTSRLWVWGQNQ------GSN----FPRLFWGAFTPNTIICQVSCGSVHVV 180
EP ++ + + L+ WG N G P+ P ++ +++ G H
Sbjct: 4 EPSASEAAPAAAALFAWGANSYGQLGLGHKEDVLLPQQLNDFCKPRSVR-RITGGGGHSA 62
Query: 181 ALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHS 240
+++ G L G N+ GQLG G T E + P K L P I QV+CG +
Sbjct: 63 VVTDGGDLFVCGLNKDGQLGLGHT-EDI--PYFTP--CKSLFGCP----IQQVACGWDFT 113
Query: 241 AAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTS 300
++ENG+V + G S GQLG + G + + + + L + +A G H+ A T+
Sbjct: 114 IMLTENGQVLSCGSNSFGQLG---VPHGPRRCVVPQAIELHKEKVVCIAAGLRHAVAATA 170
Query: 301 KGALYAWGGSQA--GQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQL-VACGHSHT 357
G ++ WG A G+ QT E + + N + V G H+
Sbjct: 171 SGIVFQWGTGLASCGRRLCPGQTLPLFFTAKEPSR------VTGLENSKAMCVLAGSDHS 224
Query: 358 LVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSP 390
G ++ WG N +GQ ANE A+ P P
Sbjct: 225 ASLTDAGEVYVWGSNKHGQLANEA---AFLPVP 254
Score = 139 (54.0 bits), Expect = 3.2e-06, P = 3.2e-06
Identities = 58/183 (31%), Positives = 82/183 (44%)
Query: 240 SAAVSENGEVYTWGLGSVGQLGHCSLQSGDKE--LLPRRVVAL-DGIFIKDVACGGVHSC 296
S A ++ WG S GQLG G KE LLP+++ ++ + GG HS
Sbjct: 8 SEAAPAAAALFAWGANSYGQLG-----LGHKEDVLLPQQLNDFCKPRSVRRITGGGGHSA 62
Query: 297 ALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILV-VPNGVQLVACGHS 355
+T G L+ G ++ GQLGLG T IP YF L P +Q VACG
Sbjct: 63 VVTDGGDLFVCGLNKDGQLGLG-HTED---IP-----YFTPCKSLFGCP--IQQVACGWD 111
Query: 356 HTLVYMRDGRIHGWGYNSYGQ-AANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLADA 414
T++ +G++ G NS+GQ P ++ +V +AAG H AV A A
Sbjct: 112 FTIMLTENGQVLSCGSNSFGQLGVPHGPRRCVVPQAIELHKEKVVCIAAGLRH-AVAATA 170
Query: 415 CSL 417
+
Sbjct: 171 SGI 173
>MGI|MGI:1917200 [details] [associations]
symbol:Rcbtb2 "regulator of chromosome condensation (RCC1)
and BTB (POZ) domain containing protein 2" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR000210 InterPro:IPR013069 Pfam:PF00651
PROSITE:PS50097 SMART:SM00225 MGI:MGI:1917200 INTERPRO:IPR000408
Pfam:PF00415 Gene3D:3.30.710.10 InterPro:IPR011333 SUPFAM:SSF54695
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
eggNOG:COG5184 GeneTree:ENSGT00700000104208 HOGENOM:HOG000065752
HOVERGEN:HBG053261 KO:K11494 CTD:1102 OrthoDB:EOG4M91R6
ChiTaRS:RCBTB2 EMBL:AK031242 EMBL:AK031248 EMBL:AK160881
EMBL:BC003224 IPI:IPI00308981 IPI:IPI00661148 RefSeq:NP_001164165.1
RefSeq:NP_598844.3 UniGene:Mm.280068 ProteinModelPortal:Q99LJ7
SMR:Q99LJ7 STRING:Q99LJ7 PhosphoSite:Q99LJ7 PaxDb:Q99LJ7
PRIDE:Q99LJ7 Ensembl:ENSMUST00000022702 Ensembl:ENSMUST00000110952
Ensembl:ENSMUST00000164822 Ensembl:ENSMUST00000169479
Ensembl:ENSMUST00000169513 Ensembl:ENSMUST00000170677 GeneID:105670
KEGG:mmu:105670 UCSC:uc007upj.2 UCSC:uc007upm.2 InParanoid:Q99LJ7
OMA:QMCSMAV NextBio:357822 Bgee:Q99LJ7 Genevestigator:Q99LJ7
GermOnline:ENSMUSG00000022106 Uniprot:Q99LJ7
Length = 551
Score = 320 (117.7 bits), Expect = 1.4e-27, Sum P(2) = 1.4e-27
Identities = 96/309 (31%), Positives = 147/309 (47%)
Query: 68 ACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTA 127
+ G+E +D +F G N G LG G + P ++ L + + S+S G+
Sbjct: 53 SAGNEVLYTTVND-EIFVLGTNCSGCLGVGDIQSTIEPRRLDSLTGKKIASLSYGSGPHI 111
Query: 128 AIAEPRENDGTISTSRLWVWGQ--NQGSNFPRLFWGAFT--PNTIICQVSCGSVHVVALS 183
+A DG + T + Q N +N + T N + +V+CGS H + L+
Sbjct: 112 VLAT---TDGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLT 168
Query: 184 ECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAV 243
G + AWGYN GQ+G G T PR + G + + + ++CG+ S AV
Sbjct: 169 SDGEVFAWGYNNSGQVGSGSTANQ-PIPRRVTGCL-------QNKVVMNIACGQMCSMAV 220
Query: 244 SENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGA 303
+ GEVY WG GQLG L S + P RV AL GI ++ VACG H+ LT +G
Sbjct: 221 VDTGEVYVWGYNGNGQLG---LGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQ 277
Query: 304 LYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGV-QLVACGHSHT-LVYM 361
+YAWG + GQLG G N+S+ + P++V + + ++ AC +HT
Sbjct: 278 IYAWGANSYGQLGTG----------NKSNQSYPT-PVVVEKDRIIEIAACHSAHTSAAKT 326
Query: 362 RDGRIHGWG 370
+ G ++ WG
Sbjct: 327 QGGHVYMWG 335
Score = 271 (100.5 bits), Expect = 2.8e-21, Sum P(2) = 2.8e-21
Identities = 65/183 (35%), Positives = 97/183 (53%)
Query: 228 EKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVA-LDGIFIK 286
+++ +V+CG YHS ++ +GEV+ WG + GQ+G S + + +PRRV L +
Sbjct: 152 KQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTAN---QPIPRRVTGCLQNKVVM 208
Query: 287 DVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNG 346
++ACG + S A+ G +Y WG + GQLGLG T R + +
Sbjct: 209 NIACGQMCSMAVVDTGEVYVWGYNGNGQLGLGSS--------GNQPTPCRVAALQGIR-- 258
Query: 347 VQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGG 406
VQ VACG++HTLV +G+I+ WG NSYGQ + YP+PV V + R +
Sbjct: 259 VQRVACGYAHTLVLTDEGQIYAWGANSYGQLGTGNKSNQSYPTPV--VVEKDRIIEIAAC 316
Query: 407 HSA 409
HSA
Sbjct: 317 HSA 319
Score = 265 (98.3 bits), Expect = 1.5e-20, Sum P(2) = 1.5e-20
Identities = 74/243 (30%), Positives = 116/243 (47%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ WG+N Q G G +P + L +N + +++ACG H+ + SDG
Sbjct: 120 VFTWGHNAYSQLGN-GTTNHGLVPCHISTNL------SNKQVIEVACGSYHSLVLTSDGE 172
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQ-LQSEFVKSISCGAHCTAAIAEPRENDGTIST 141
+F WG N GQ+G G+ + P +V LQ++ V +I+CG C+ A+ + T
Sbjct: 173 VFAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKVVMNIACGQMCSMAV---------VDT 223
Query: 142 SRLWVWGQNQ------GS--NFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGY 193
++VWG N GS N P A + +V+CG H + L++ G + AWG
Sbjct: 224 GEVYVWGYNGNGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQIYAWGA 283
Query: 194 NEYGQLGRGITC-EGLQGPRVIKGYAKFLDEAPELEKITQVS-CGEYH-SAAVSENGEVY 250
N YGQLG G + P V+ E ++I +++ C H SAA ++ G VY
Sbjct: 284 NSYGQLGTGNKSNQSYPTPVVV-----------EKDRIIEIAACHSAHTSAAKTQGGHVY 332
Query: 251 TWG 253
WG
Sbjct: 333 MWG 335
Score = 256 (95.2 bits), Expect = 1.8e-19, Sum P(2) = 1.8e-19
Identities = 80/266 (30%), Positives = 124/266 (46%)
Query: 73 HTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVK-QLQSEFVKSISCGAHCTAAIAE 131
H +DG +FTWG N + QLG+GT P + L ++ V ++CG++ + +
Sbjct: 110 HIVLATTDGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLT- 168
Query: 132 PRENDGTISTSRLWVWGQNQ----GSN------FPRLFWGAFTPNTIICQVSCGSVHVVA 181
+DG + + WG N GS PR G N ++ ++CG + +A
Sbjct: 169 ---SDGEV-----FAWGYNNSGQVGSGSTANQPIPRRVTGCLQ-NKVVMNIACGQMCSMA 219
Query: 182 LSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSA 241
+ + G + WGYN GQLG G + G Q P + A L ++ +V+CG H+
Sbjct: 220 VVDTGEVYVWGYNGNGQLGLGSS--GNQ-PTPCRVAA--LQGI----RVQRVACGYAHTL 270
Query: 242 AVSENGEVYTWGLGSVGQLGHCSLQSGDK--ELLPRRVVALDGIFIKDVACGGVH-SCAL 298
+++ G++Y WG S GQLG +G+K + P VV I+ AC H S A
Sbjct: 271 VLTDEGQIYAWGANSYGQLG-----TGNKSNQSYPTPVVVEKDRIIEIAACHSAHTSAAK 325
Query: 299 TSKGALYAWGGSQAGQLGLGPQTRSF 324
T G +Y WG + GQ + P F
Sbjct: 326 TQGGHVYMWGQCR-GQSVILPHHTHF 350
Score = 165 (63.1 bits), Expect = 4.6e-09, Sum P(2) = 4.6e-09
Identities = 40/133 (30%), Positives = 63/133 (47%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+YVWGYN +GQ G Q P A R +ACG+ HT + +G
Sbjct: 226 VYVWGYNGNGQLGLGSSGNQ--------PTPCRVAALQGIRVQRVACGYAHTLVLTDEGQ 277
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISC-GAHCTAAIAEPRENDGTIST 141
++ WGAN +GQLG G + + +P V + ++ +C AH +AA + G
Sbjct: 278 IYAWGANSYGQLGTGNKSNQSYPTPVVVEKDRIIEIAACHSAHTSAA-----KTQG---- 328
Query: 142 SRLWVWGQNQGSN 154
+++WGQ +G +
Sbjct: 329 GHVYMWGQCRGQS 341
Score = 45 (20.9 bits), Expect = 1.4e-27, Sum P(2) = 1.4e-27
Identities = 10/39 (25%), Positives = 19/39 (48%)
Query: 417 LKELCEFRLAESVTLSNASEIEDVASRTGSEALARLCER 455
LK+LC+ + + + NA + A + ++ L C R
Sbjct: 475 LKKLCQQTIKQGICEENAIALLSAAVKYDAQDLEEFCFR 513
>TAIR|locus:2025277 [details] [associations]
symbol:PRAF1 "AT1G76950" species:3702 "Arabidopsis
thaliana" [GO:0003682 "chromatin binding" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0008270 "zinc ion binding" evidence=ISS]
[GO:0008536 "Ran GTPase binding" evidence=ISS] [GO:0046872 "metal
ion binding" evidence=IEA] InterPro:IPR000306 Pfam:PF01363
SMART:SM00064 INTERPRO:IPR000408 Pfam:PF00415 EMBL:CP002684
Gene3D:2.30.29.30 InterPro:IPR011993 GO:GO:0046872
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
Gene3D:3.30.40.10 InterPro:IPR017455 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 PROSITE:PS50178 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 InterPro:IPR013591 Pfam:PF08381
PROSITE:PS51514 HSSP:Q15075 EMBL:AF323270 IPI:IPI00521580
RefSeq:NP_565144.1 UniGene:At.19186 ProteinModelPortal:Q947D2
SMR:Q947D2 PRIDE:Q947D2 EnsemblPlants:AT1G76950.1 GeneID:844030
KEGG:ath:AT1G76950 TAIR:At1g76950 InParanoid:Q947D2 OMA:WIPKRIA
PhylomeDB:Q947D2 ProtClustDB:CLSN2686442 Genevestigator:Q947D2
Uniprot:Q947D2
Length = 1103
Score = 328 (120.5 bits), Expect = 4.4e-27, Sum P(2) = 4.4e-27
Identities = 100/307 (32%), Positives = 155/307 (50%)
Query: 23 IYVWGYN-HS-GQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASD 80
+Y WG H+ G G G + IPK++ L G + ++CG HTA + S
Sbjct: 355 LYTWGDGTHNVGLLGH-GSDISHWIPKRIAGSLEGLHVAS------VSCGPWHTALITSY 407
Query: 81 GTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAE---PRENDG 137
G LFT+G FG LG G +E ++P +V+ L ++SCG TAA+ E + N
Sbjct: 408 GRLFTFGDGTFGVLGHGDKETVQYPREVESLSGLRTIAVSCGVWHTAAVVEIIVTQSNSS 467
Query: 138 TISTSRLWVWG---QNQ---GSNFPRLFWGAFTPNTI---ICQVSCGSVHVVALSECGLL 188
++S+ +L+ WG +N+ G PRL P I +++CG V L+ G +
Sbjct: 468 SVSSGKLFTWGDGDKNRLGHGDKDPRLK-PTCVPALIDYNFHKIACGHSLTVGLTTSGQV 526
Query: 189 QAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGE 248
G YGQLG + +G + P +++ K E E ++SCG YH AA++ E
Sbjct: 527 FTMGSTVYGQLGN-LQTDG-KLPCLVED--KLASEFVE-----EISCGAYHVAALTSRNE 577
Query: 249 VYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAW- 307
VYTWG G+ G+LGH L+ D+++ P V AL +K +ACG ++ A+ L+ W
Sbjct: 578 VYTWGKGANGRLGHGDLE--DRKV-PTIVEALKDRHVKYIACGSNYTAAI----CLHKWV 630
Query: 308 GGSQAGQ 314
G++ Q
Sbjct: 631 SGAEQSQ 637
Score = 285 (105.4 bits), Expect = 1.2e-21, Sum P(2) = 1.2e-21
Identities = 114/421 (27%), Positives = 176/421 (41%)
Query: 15 DNIPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLD---IACGH 71
D+ A +Y+WG + G ++ L P +N LD IACG
Sbjct: 232 DDSDALGDVYIWGEVICDNVVKVGIDKNASYLTTRTDVLVPKPLESNIV-LDVHQIACGV 290
Query: 72 EHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQS-EFVKSISCGAHCTAAIA 130
H A V G +FTWG G+LG G + HP V+ L + V ++CG T A+
Sbjct: 291 RHAAFVTRQGEIFTWGEESGGRLGHGIGKDVFHPRLVESLTATSSVDFVACGEFHTCAVT 350
Query: 131 EPRE----NDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECG 186
E DGT + L G + P+ G+ + VSCG H ++ G
Sbjct: 351 LAGELYTWGDGTHNVGLLG-HGSDISHWIPKRIAGSLE-GLHVASVSCGPWHTALITSYG 408
Query: 187 LLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSE- 245
L +G +G LG G E +Q PR ++ + L I VSCG +H+AAV E
Sbjct: 409 RLFTFGDGTFGVLGHGDK-ETVQYPREVESLSG-------LRTIA-VSCGVWHTAAVVEI 459
Query: 246 -----------NGEVYTWGLGSVGQLGHCSLQSGDKE--LLPRRVVALDGIFIKDVACGG 292
+G+++TWG G +LGH GDK+ L P V AL +ACG
Sbjct: 460 IVTQSNSSSVSSGKLFTWGDGDKNRLGH-----GDKDPRLKPTCVPALIDYNFHKIACGH 514
Query: 293 VHSCALTSKGALYAWGGSQAGQLG-LGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVA 351
+ LT+ G ++ G + GQLG L + L+ ++ + F V+ ++
Sbjct: 515 SLTVGLTTSGQVFTMGSTVYGQLGNLQTDGKLPCLVEDKLASEF-----------VEEIS 563
Query: 352 CGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAV 410
CG H ++ WG + G+ + P+ V+ V+ +A G ++A
Sbjct: 564 CGAYHVAALTSRNEVYTWGKGANGRLGHGDLEDRKVPTIVEALKDRHVKYIACGSNYTAA 623
Query: 411 L 411
+
Sbjct: 624 I 624
Score = 150 (57.9 bits), Expect = 1.7e-06, Sum P(2) = 1.7e-06
Identities = 43/114 (37%), Positives = 58/114 (50%)
Query: 66 DIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHC 125
+I+CG H AA+ S ++TWG G+LG G E RK P V+ L+ VK I+CG++
Sbjct: 561 EISCGAYHVAALTSRNEVYTWGKGANGRLGHGDLEDRKVPTIVEALKDRHVKYIACGSNY 620
Query: 126 TAAIAEPRENDGTISTSRLWVWGQNQGS-NFPRLFWGAFTPNTIICQVSCGSVH 178
TAAI + WV G Q + RL +G FT C +CG VH
Sbjct: 621 TAAICLHK-----------WVSGAEQSQCSTCRLAFG-FTRKRHNCY-NCGLVH 661
Score = 44 (20.5 bits), Expect = 4.4e-27, Sum P(2) = 4.4e-27
Identities = 16/50 (32%), Positives = 24/50 (48%)
Query: 416 SLKELCEFR---LAESVTLSNAS----EIEDVASRTGSEALARLCERLRE 458
SL + CEF+ L SV + + E E SR EA+ L +L++
Sbjct: 851 SLTQKCEFQEVELQNSVKKTQEALALAEEESAKSRAAKEAIKSLIAQLKD 900
>UNIPROTKB|Q74AS9 [details] [associations]
symbol:GSU2272 "ATS1 domain repeat lipoprotein"
species:243231 "Geobacter sulfurreducens PCA" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] INTERPRO:IPR000408 Pfam:PF00415 EMBL:AE017180
GenomeReviews:AE017180_GR Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS50012 RefSeq:NP_953321.1
ProteinModelPortal:Q74AS9 GeneID:2686981 KEGG:gsu:GSU2272
PATRIC:22027399 HOGENOM:HOG000020996 OMA:TGTALAW
BioCyc:GSUL243231:GH27-2248-MONOMER Uniprot:Q74AS9
Length = 403
Score = 306 (112.8 bits), Expect = 5.1e-27, P = 5.1e-27
Identities = 102/315 (32%), Positives = 148/315 (46%)
Query: 71 HEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIA 130
+ H+A + TL WG NE GQLGDGT P++++ + + + GA T AIA
Sbjct: 40 YSHSAVFQNMTTLAVWGNNESGQLGDGTTTSAATPKRLRLGFATYSSGFATGASHTLAIA 99
Query: 131 EPRENDGTISTSRLWVWGQNQGSNF---PRLFWGAFTPNTI------ICQVSCGSVHVVA 181
+N +S R WG N P + TP I + QV+ G +H +A
Sbjct: 100 R-FDN---VSGVR--AWGSNSAGQIGRDPATVPTSSTPVKIGGFGGAVQQVAAGGLHSMA 153
Query: 182 LSECGLLQAWGYNEYGQLGRG-ITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHS 240
L+ G + AWG N GQL I+ PR ++ AK L AP T + G HS
Sbjct: 154 LAG-GTVWAWGSNSAGQLALNPISSATRFAPRQVET-AK-LPIAP-----TAIVAGGSHS 205
Query: 241 AAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTS 300
A + E Y WG + GQLG+ + S +P++V I I+ ++ GG H+ AL S
Sbjct: 206 IAYTST-EAYAWGNNASGQLGNGTTLSNH---MPQKVQLPSSITIRKISAGGSHNLALDS 261
Query: 301 KGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVY 360
GA++AWG + GQLG G T N+S +P V G V G SH++
Sbjct: 262 TGAIWAWGSNAYGQLGNGTTT-------NQSTPVQLTLPAGVT--GFIDVFAGPSHSVAV 312
Query: 361 MRDGRIHGWGYNSYG 375
+ ++ WG+N+ G
Sbjct: 313 ASNFTVYTWGFNTLG 327
Score = 239 (89.2 bits), Expect = 1.3e-17, P = 1.3e-17
Identities = 90/310 (29%), Positives = 137/310 (44%)
Query: 21 SAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASD 80
S + WG N +GQ GR +P P G GA + +A G H+ A+A
Sbjct: 105 SGVRAWGSNSAGQIGRD----PATVPTSSTPVKIGGFGGAVQQ---VAAGGLHSMALAG- 156
Query: 81 GTLFTWGANEFGQLGDG--TEEGRKHPEKVKQLQSEFVKS--ISCGAHCTAAIAEPREND 136
GT++ WG+N GQL + R P +V+ + + ++ G+H A +
Sbjct: 157 GTVWAWGSNSAGQLALNPISSATRFAPRQVETAKLPIAPTAIVAGGSHSIAYTSTEAYAW 216
Query: 137 GTISTSRLWVWGQNQGSNFPRLFWGAFTPNTI-ICQVSCGSVHVVALSECGLLQAWGYNE 195
G ++ +L G ++ P+ P++I I ++S G H +AL G + AWG N
Sbjct: 217 GNNASGQLGN-GTTLSNHMPQKVQ---LPSSITIRKISAGGSHNLALDSTGAIWAWGSNA 272
Query: 196 YGQLGRGITCEGLQGPRVI--KGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWG 253
YGQLG G T ++ G F+D V G HS AV+ N VYTWG
Sbjct: 273 YGQLGNGTTTNQSTPVQLTLPAGVTGFID----------VFAGPSHSVAVASNFTVYTWG 322
Query: 254 LGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVA----CGGVHSCALTS-KGALYAWG 308
++G L + +GD +L P +V + DV G + + G ++AWG
Sbjct: 323 FNTLGLLSVGT--TGD-QLSPAQVRDASNVPFTDVERVVLLGSFFTIVKKNGSGGMWAWG 379
Query: 309 GSQAGQLGLG 318
+ GQLG G
Sbjct: 380 YNGYGQLGDG 389
Score = 218 (81.8 bits), Expect = 3.4e-15, P = 3.4e-15
Identities = 93/327 (28%), Positives = 130/327 (39%)
Query: 68 ACGHEHTAAVAS-DGT--LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAH 124
A G HT A+A D + WG+N GQ+G + P V S VK G
Sbjct: 89 ATGASHTLAIARFDNVSGVRAWGSNSAGQIG-------RDPATVPT-SSTPVKIGGFGG- 139
Query: 125 CTAAIAEPRENDGTISTSRLWVWGQNQGSNF---PRLFWGAFTPNTI-ICQVSCGSVHVV 180
+A + ++ +W WG N P F P + ++ +V
Sbjct: 140 AVQQVAAGGLHSMALAGGTVWAWGSNSAGQLALNPISSATRFAPRQVETAKLPIAPTAIV 199
Query: 181 ALSECGLLQ------AWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVS 234
A + AWG N GQLG G T +V + P I ++S
Sbjct: 200 AGGSHSIAYTSTEAYAWGNNASGQLGNGTTLSNHMPQKV---------QLPSSITIRKIS 250
Query: 235 CGEYHSAAVSENGEVYTWGLGSVGQLGHCSL--QSGDKEL-LPRRVVALDGIFIKDVACG 291
G H+ A+ G ++ WG + GQLG+ + QS +L LP V FI DV G
Sbjct: 251 AGGSHNLALDSTGAIWAWGSNAYGQLGNGTTTNQSTPVQLTLPAGVTG----FI-DVFAG 305
Query: 292 GVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNE-SDTYFRNIPILVVPNGVQLV 350
HS A+ S +Y WG + G L +G T L P + D N+P V ++V
Sbjct: 306 PSHSVAVASNFTVYTWGFNTLGLLSVG--TTGDQLSPAQVRDA--SNVPFTDVE---RVV 358
Query: 351 ACGHSHTLVYMR-DGRIHGWGYNSYGQ 376
G T+V G + WGYN YGQ
Sbjct: 359 LLGSFFTIVKKNGSGGMWAWGYNGYGQ 385
Score = 216 (81.1 bits), Expect = 5.8e-15, P = 5.8e-15
Identities = 92/317 (29%), Positives = 127/317 (40%)
Query: 21 SAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVAS- 79
+ + VWG N SGQ G G PK+L +G A G HT A+A
Sbjct: 50 TTLAVWGNNESGQLG-DGTTTSAATPKRLRLGFATYSSG-------FATGASHTLAIARF 101
Query: 80 DGT--LFTWGANEFGQLG-D-GTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREN 135
D + WG+N GQ+G D T P K+ V+ ++ G + A+A
Sbjct: 102 DNVSGVRAWGSNSAGQIGRDPATVPTSSTPVKIGGFGGA-VQQVAAGGLHSMALA----- 155
Query: 136 DGTISTSRLWVWGQNQGSNF---PRLFWGAFTPNTI------ICQVS--CGSVHVVALSE 184
GT+ W WG N P F P + I + G H +A +
Sbjct: 156 GGTV-----WAWGSNSAGQLALNPISSATRFAPRQVETAKLPIAPTAIVAGGSHSIAYTS 210
Query: 185 CGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVS 244
AWG N GQLG G T +V + P I ++S G H+ A+
Sbjct: 211 TEAY-AWGNNASGQLGNGTTLSNHMPQKV---------QLPSSITIRKISAGGSHNLALD 260
Query: 245 ENGEVYTWGLGSVGQLGHCSL--QSGDKEL-LPRRVVALDGIFIKDVACGGVHSCALTSK 301
G ++ WG + GQLG+ + QS +L LP V FI DV G HS A+ S
Sbjct: 261 STGAIWAWGSNAYGQLGNGTTTNQSTPVQLTLPAGVTG----FI-DVFAGPSHSVAVASN 315
Query: 302 GALYAWGGSQAGQLGLG 318
+Y WG + G L +G
Sbjct: 316 FTVYTWGFNTLGLLSVG 332
Score = 191 (72.3 bits), Expect = 4.0e-12, P = 4.0e-12
Identities = 61/186 (32%), Positives = 86/186 (46%)
Query: 230 ITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRV-VALDGIFIKDV 288
+ QV+ G HS A++ G V+ WG S GQL + S + PR+V A I +
Sbjct: 141 VQQVAAGGLHSMALA-GGTVWAWGSNSAGQLALNPISSATR-FAPRQVETAKLPIAPTAI 198
Query: 289 ACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQ 348
GG HS A TS A YAWG + +GQLG G T + +P + +P + ++
Sbjct: 199 VAGGSHSIAYTSTEA-YAWGNNASGQLGNG--TTLSNHMPQKVQ-----LPSSIT---IR 247
Query: 349 LVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVR--KLAAGGG 406
++ G SH L G I WG N+YGQ N +T P + G + AG
Sbjct: 248 KISAGGSHNLALDSTGAIWAWGSNAYGQLGNGTTTNQSTPVQLTLPAGVTGFIDVFAGPS 307
Query: 407 HSAVLA 412
HS +A
Sbjct: 308 HSVAVA 313
Score = 174 (66.3 bits), Expect = 3.2e-10, P = 3.2e-10
Identities = 69/255 (27%), Positives = 102/255 (40%)
Query: 19 AKSAIYVWGYNHSGQTGRKGRERQLRI-PKQLPPELFGCPAGANSRWLDIACGHEHTAAV 77
A ++ WG N +GQ R P+Q+ E P + I G H+ A
Sbjct: 155 AGGTVWAWGSNSAGQLALNPISSATRFAPRQV--ETAKLPIAPTA----IVAGGSHSIAY 208
Query: 78 ASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDG 137
S + WG N GQLG+GT P+KV+ S ++ IS G A+ D
Sbjct: 209 TSTEA-YAWGNNASGQLGNGTTLSNHMPQKVQLPSSITIRKISAGGSHNLAL------D- 260
Query: 138 TISTSRLWVWGQNQ-GSNFPRLFWGAFTPNTI--------ICQVSCGSVHVVALSECGLL 188
ST +W WG N G TP + V G H VA++ +
Sbjct: 261 --STGAIWAWGSNAYGQLGNGTTTNQSTPVQLTLPAGVTGFIDVFAGPSHSVAVASNFTV 318
Query: 189 QAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGE 248
WG+N G L G T + L P ++ + ++E++ V G + + V +NG
Sbjct: 319 YTWGFNTLGLLSVGTTGDQLS-PAQVRDASNV--PFTDVERV--VLLGSFFTI-VKKNGS 372
Query: 249 --VYTWGLGSVGQLG 261
++ WG GQLG
Sbjct: 373 GGMWAWGYNGYGQLG 387
Score = 159 (61.0 bits), Expect = 1.5e-08, P = 1.5e-08
Identities = 56/186 (30%), Positives = 83/186 (44%)
Query: 24 YVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGTL 83
Y WG N SGQ G G +P+++ +L P+ R I+ G H A+ S G +
Sbjct: 214 YAWGNNASGQLGN-GTTLSNHMPQKV--QL---PSSITIR--KISAGGSHNLALDSTGAI 265
Query: 84 FTWGANEFGQLGDGTEEGRKHPEKVKQLQ--SEFVKSISCGAHCTAAIAEPRENDGTIST 141
+ WG+N +GQLG+GT + P ++ + F+ + +H A + +T
Sbjct: 266 WAWGSNAYGQLGNGTTTNQSTPVQLTLPAGVTGFIDVFAGPSHSVAVASNFTVYTWGFNT 325
Query: 142 SRLWVWGQNQGSNFPRLFWGAFT-PNTIICQVSC-GSVH-VVALSECGLLQAWGYNEYGQ 198
L G P A P T + +V GS +V + G + AWGYN YGQ
Sbjct: 326 LGLLSVGTTGDQLSPAQVRDASNVPFTDVERVVLLGSFFTIVKKNGSGGMWAWGYNGYGQ 385
Query: 199 LGRGIT 204
LG G T
Sbjct: 386 LGDGTT 391
Score = 137 (53.3 bits), Expect = 4.2e-06, P = 4.2e-06
Identities = 41/138 (29%), Positives = 62/138 (44%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
+ + AI+ WG N GQ G G P QL PAG ++D+ G H+ A
Sbjct: 259 LDSTGAIWAWGSNAYGQLGN-GTTTNQSTPVQLT-----LPAGVTG-FIDVFAGPSHSVA 311
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQS----EFVKSISCGAHCTAAIAEP 132
VAS+ T++TWG N G L GT + P +V+ + + + + G+ T I +
Sbjct: 312 VASNFTVYTWGFNTLGLLSVGTTGDQLSPAQVRDASNVPFTDVERVVLLGSFFT--IVKK 369
Query: 133 RENDGTISTSRLWVWGQN 150
+ G +W WG N
Sbjct: 370 NGSGG------MWAWGYN 381
Score = 119 (46.9 bits), Expect = 0.00041, P = 0.00041
Identities = 41/124 (33%), Positives = 55/124 (44%)
Query: 294 HSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACG 353
HS + L WG +++GQLG G T + + P F +G A G
Sbjct: 42 HSAVFQNMTTLAVWGNNESGQLGDGTTTSAAT--PKRLRLGFATYS-----SGF---ATG 91
Query: 354 HSHTLVYMRDGRIHG---WGYNSYGQAANEKSTYAWYPSPVD--WCVGEVRKLAAGGGHS 408
SHTL R + G WG NS GQ + +T +PV G V+++AAGG HS
Sbjct: 92 ASHTLAIARFDNVSGVRAWGSNSAGQIGRDPATVPTSSTPVKIGGFGGAVQQVAAGGLHS 151
Query: 409 AVLA 412
LA
Sbjct: 152 MALA 155
>TIGR_CMR|GSU_2272 [details] [associations]
symbol:GSU_2272 "lipoprotein, putative" species:243231
"Geobacter sulfurreducens PCA" [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
INTERPRO:IPR000408 Pfam:PF00415 EMBL:AE017180
GenomeReviews:AE017180_GR Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS50012 RefSeq:NP_953321.1
ProteinModelPortal:Q74AS9 GeneID:2686981 KEGG:gsu:GSU2272
PATRIC:22027399 HOGENOM:HOG000020996 OMA:TGTALAW
BioCyc:GSUL243231:GH27-2248-MONOMER Uniprot:Q74AS9
Length = 403
Score = 306 (112.8 bits), Expect = 5.1e-27, P = 5.1e-27
Identities = 102/315 (32%), Positives = 148/315 (46%)
Query: 71 HEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIA 130
+ H+A + TL WG NE GQLGDGT P++++ + + + GA T AIA
Sbjct: 40 YSHSAVFQNMTTLAVWGNNESGQLGDGTTTSAATPKRLRLGFATYSSGFATGASHTLAIA 99
Query: 131 EPRENDGTISTSRLWVWGQNQGSNF---PRLFWGAFTPNTI------ICQVSCGSVHVVA 181
+N +S R WG N P + TP I + QV+ G +H +A
Sbjct: 100 R-FDN---VSGVR--AWGSNSAGQIGRDPATVPTSSTPVKIGGFGGAVQQVAAGGLHSMA 153
Query: 182 LSECGLLQAWGYNEYGQLGRG-ITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHS 240
L+ G + AWG N GQL I+ PR ++ AK L AP T + G HS
Sbjct: 154 LAG-GTVWAWGSNSAGQLALNPISSATRFAPRQVET-AK-LPIAP-----TAIVAGGSHS 205
Query: 241 AAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTS 300
A + E Y WG + GQLG+ + S +P++V I I+ ++ GG H+ AL S
Sbjct: 206 IAYTST-EAYAWGNNASGQLGNGTTLSNH---MPQKVQLPSSITIRKISAGGSHNLALDS 261
Query: 301 KGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVY 360
GA++AWG + GQLG G T N+S +P V G V G SH++
Sbjct: 262 TGAIWAWGSNAYGQLGNGTTT-------NQSTPVQLTLPAGVT--GFIDVFAGPSHSVAV 312
Query: 361 MRDGRIHGWGYNSYG 375
+ ++ WG+N+ G
Sbjct: 313 ASNFTVYTWGFNTLG 327
Score = 239 (89.2 bits), Expect = 1.3e-17, P = 1.3e-17
Identities = 90/310 (29%), Positives = 137/310 (44%)
Query: 21 SAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASD 80
S + WG N +GQ GR +P P G GA + +A G H+ A+A
Sbjct: 105 SGVRAWGSNSAGQIGRD----PATVPTSSTPVKIGGFGGAVQQ---VAAGGLHSMALAG- 156
Query: 81 GTLFTWGANEFGQLGDG--TEEGRKHPEKVKQLQSEFVKS--ISCGAHCTAAIAEPREND 136
GT++ WG+N GQL + R P +V+ + + ++ G+H A +
Sbjct: 157 GTVWAWGSNSAGQLALNPISSATRFAPRQVETAKLPIAPTAIVAGGSHSIAYTSTEAYAW 216
Query: 137 GTISTSRLWVWGQNQGSNFPRLFWGAFTPNTI-ICQVSCGSVHVVALSECGLLQAWGYNE 195
G ++ +L G ++ P+ P++I I ++S G H +AL G + AWG N
Sbjct: 217 GNNASGQLGN-GTTLSNHMPQKVQ---LPSSITIRKISAGGSHNLALDSTGAIWAWGSNA 272
Query: 196 YGQLGRGITCEGLQGPRVI--KGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWG 253
YGQLG G T ++ G F+D V G HS AV+ N VYTWG
Sbjct: 273 YGQLGNGTTTNQSTPVQLTLPAGVTGFID----------VFAGPSHSVAVASNFTVYTWG 322
Query: 254 LGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVA----CGGVHSCALTS-KGALYAWG 308
++G L + +GD +L P +V + DV G + + G ++AWG
Sbjct: 323 FNTLGLLSVGT--TGD-QLSPAQVRDASNVPFTDVERVVLLGSFFTIVKKNGSGGMWAWG 379
Query: 309 GSQAGQLGLG 318
+ GQLG G
Sbjct: 380 YNGYGQLGDG 389
Score = 218 (81.8 bits), Expect = 3.4e-15, P = 3.4e-15
Identities = 93/327 (28%), Positives = 130/327 (39%)
Query: 68 ACGHEHTAAVAS-DGT--LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAH 124
A G HT A+A D + WG+N GQ+G + P V S VK G
Sbjct: 89 ATGASHTLAIARFDNVSGVRAWGSNSAGQIG-------RDPATVPT-SSTPVKIGGFGG- 139
Query: 125 CTAAIAEPRENDGTISTSRLWVWGQNQGSNF---PRLFWGAFTPNTI-ICQVSCGSVHVV 180
+A + ++ +W WG N P F P + ++ +V
Sbjct: 140 AVQQVAAGGLHSMALAGGTVWAWGSNSAGQLALNPISSATRFAPRQVETAKLPIAPTAIV 199
Query: 181 ALSECGLLQ------AWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVS 234
A + AWG N GQLG G T +V + P I ++S
Sbjct: 200 AGGSHSIAYTSTEAYAWGNNASGQLGNGTTLSNHMPQKV---------QLPSSITIRKIS 250
Query: 235 CGEYHSAAVSENGEVYTWGLGSVGQLGHCSL--QSGDKEL-LPRRVVALDGIFIKDVACG 291
G H+ A+ G ++ WG + GQLG+ + QS +L LP V FI DV G
Sbjct: 251 AGGSHNLALDSTGAIWAWGSNAYGQLGNGTTTNQSTPVQLTLPAGVTG----FI-DVFAG 305
Query: 292 GVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNE-SDTYFRNIPILVVPNGVQLV 350
HS A+ S +Y WG + G L +G T L P + D N+P V ++V
Sbjct: 306 PSHSVAVASNFTVYTWGFNTLGLLSVG--TTGDQLSPAQVRDA--SNVPFTDVE---RVV 358
Query: 351 ACGHSHTLVYMR-DGRIHGWGYNSYGQ 376
G T+V G + WGYN YGQ
Sbjct: 359 LLGSFFTIVKKNGSGGMWAWGYNGYGQ 385
Score = 216 (81.1 bits), Expect = 5.8e-15, P = 5.8e-15
Identities = 92/317 (29%), Positives = 127/317 (40%)
Query: 21 SAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVAS- 79
+ + VWG N SGQ G G PK+L +G A G HT A+A
Sbjct: 50 TTLAVWGNNESGQLG-DGTTTSAATPKRLRLGFATYSSG-------FATGASHTLAIARF 101
Query: 80 DGT--LFTWGANEFGQLG-D-GTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREN 135
D + WG+N GQ+G D T P K+ V+ ++ G + A+A
Sbjct: 102 DNVSGVRAWGSNSAGQIGRDPATVPTSSTPVKIGGFGGA-VQQVAAGGLHSMALA----- 155
Query: 136 DGTISTSRLWVWGQNQGSNF---PRLFWGAFTPNTI------ICQVS--CGSVHVVALSE 184
GT+ W WG N P F P + I + G H +A +
Sbjct: 156 GGTV-----WAWGSNSAGQLALNPISSATRFAPRQVETAKLPIAPTAIVAGGSHSIAYTS 210
Query: 185 CGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVS 244
AWG N GQLG G T +V + P I ++S G H+ A+
Sbjct: 211 TEAY-AWGNNASGQLGNGTTLSNHMPQKV---------QLPSSITIRKISAGGSHNLALD 260
Query: 245 ENGEVYTWGLGSVGQLGHCSL--QSGDKEL-LPRRVVALDGIFIKDVACGGVHSCALTSK 301
G ++ WG + GQLG+ + QS +L LP V FI DV G HS A+ S
Sbjct: 261 STGAIWAWGSNAYGQLGNGTTTNQSTPVQLTLPAGVTG----FI-DVFAGPSHSVAVASN 315
Query: 302 GALYAWGGSQAGQLGLG 318
+Y WG + G L +G
Sbjct: 316 FTVYTWGFNTLGLLSVG 332
Score = 191 (72.3 bits), Expect = 4.0e-12, P = 4.0e-12
Identities = 61/186 (32%), Positives = 86/186 (46%)
Query: 230 ITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRV-VALDGIFIKDV 288
+ QV+ G HS A++ G V+ WG S GQL + S + PR+V A I +
Sbjct: 141 VQQVAAGGLHSMALA-GGTVWAWGSNSAGQLALNPISSATR-FAPRQVETAKLPIAPTAI 198
Query: 289 ACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQ 348
GG HS A TS A YAWG + +GQLG G T + +P + +P + ++
Sbjct: 199 VAGGSHSIAYTSTEA-YAWGNNASGQLGNG--TTLSNHMPQKVQ-----LPSSIT---IR 247
Query: 349 LVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVR--KLAAGGG 406
++ G SH L G I WG N+YGQ N +T P + G + AG
Sbjct: 248 KISAGGSHNLALDSTGAIWAWGSNAYGQLGNGTTTNQSTPVQLTLPAGVTGFIDVFAGPS 307
Query: 407 HSAVLA 412
HS +A
Sbjct: 308 HSVAVA 313
Score = 174 (66.3 bits), Expect = 3.2e-10, P = 3.2e-10
Identities = 69/255 (27%), Positives = 102/255 (40%)
Query: 19 AKSAIYVWGYNHSGQTGRKGRERQLRI-PKQLPPELFGCPAGANSRWLDIACGHEHTAAV 77
A ++ WG N +GQ R P+Q+ E P + I G H+ A
Sbjct: 155 AGGTVWAWGSNSAGQLALNPISSATRFAPRQV--ETAKLPIAPTA----IVAGGSHSIAY 208
Query: 78 ASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDG 137
S + WG N GQLG+GT P+KV+ S ++ IS G A+ D
Sbjct: 209 TSTEA-YAWGNNASGQLGNGTTLSNHMPQKVQLPSSITIRKISAGGSHNLAL------D- 260
Query: 138 TISTSRLWVWGQNQ-GSNFPRLFWGAFTPNTI--------ICQVSCGSVHVVALSECGLL 188
ST +W WG N G TP + V G H VA++ +
Sbjct: 261 --STGAIWAWGSNAYGQLGNGTTTNQSTPVQLTLPAGVTGFIDVFAGPSHSVAVASNFTV 318
Query: 189 QAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGE 248
WG+N G L G T + L P ++ + ++E++ V G + + V +NG
Sbjct: 319 YTWGFNTLGLLSVGTTGDQLS-PAQVRDASNV--PFTDVERV--VLLGSFFTI-VKKNGS 372
Query: 249 --VYTWGLGSVGQLG 261
++ WG GQLG
Sbjct: 373 GGMWAWGYNGYGQLG 387
Score = 159 (61.0 bits), Expect = 1.5e-08, P = 1.5e-08
Identities = 56/186 (30%), Positives = 83/186 (44%)
Query: 24 YVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGTL 83
Y WG N SGQ G G +P+++ +L P+ R I+ G H A+ S G +
Sbjct: 214 YAWGNNASGQLGN-GTTLSNHMPQKV--QL---PSSITIR--KISAGGSHNLALDSTGAI 265
Query: 84 FTWGANEFGQLGDGTEEGRKHPEKVKQLQ--SEFVKSISCGAHCTAAIAEPRENDGTIST 141
+ WG+N +GQLG+GT + P ++ + F+ + +H A + +T
Sbjct: 266 WAWGSNAYGQLGNGTTTNQSTPVQLTLPAGVTGFIDVFAGPSHSVAVASNFTVYTWGFNT 325
Query: 142 SRLWVWGQNQGSNFPRLFWGAFT-PNTIICQVSC-GSVH-VVALSECGLLQAWGYNEYGQ 198
L G P A P T + +V GS +V + G + AWGYN YGQ
Sbjct: 326 LGLLSVGTTGDQLSPAQVRDASNVPFTDVERVVLLGSFFTIVKKNGSGGMWAWGYNGYGQ 385
Query: 199 LGRGIT 204
LG G T
Sbjct: 386 LGDGTT 391
Score = 137 (53.3 bits), Expect = 4.2e-06, P = 4.2e-06
Identities = 41/138 (29%), Positives = 62/138 (44%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
+ + AI+ WG N GQ G G P QL PAG ++D+ G H+ A
Sbjct: 259 LDSTGAIWAWGSNAYGQLGN-GTTTNQSTPVQLT-----LPAGVTG-FIDVFAGPSHSVA 311
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQS----EFVKSISCGAHCTAAIAEP 132
VAS+ T++TWG N G L GT + P +V+ + + + + G+ T I +
Sbjct: 312 VASNFTVYTWGFNTLGLLSVGTTGDQLSPAQVRDASNVPFTDVERVVLLGSFFT--IVKK 369
Query: 133 RENDGTISTSRLWVWGQN 150
+ G +W WG N
Sbjct: 370 NGSGG------MWAWGYN 381
Score = 119 (46.9 bits), Expect = 0.00041, P = 0.00041
Identities = 41/124 (33%), Positives = 55/124 (44%)
Query: 294 HSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACG 353
HS + L WG +++GQLG G T + + P F +G A G
Sbjct: 42 HSAVFQNMTTLAVWGNNESGQLGDGTTTSAAT--PKRLRLGFATYS-----SGF---ATG 91
Query: 354 HSHTLVYMRDGRIHG---WGYNSYGQAANEKSTYAWYPSPVD--WCVGEVRKLAAGGGHS 408
SHTL R + G WG NS GQ + +T +PV G V+++AAGG HS
Sbjct: 92 ASHTLAIARFDNVSGVRAWGSNSAGQIGRDPATVPTSSTPVKIGGFGGAVQQVAAGGLHS 151
Query: 409 AVLA 412
LA
Sbjct: 152 MALA 155
>UNIPROTKB|Q3MHW0 [details] [associations]
symbol:SERGEF "Secretion-regulating guanine nucleotide
exchange factor" species:9913 "Bos taurus" [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0050709 "negative regulation of protein
secretion" evidence=IEA] [GO:0045111 "intermediate filament
cytoskeleton" evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
[GO:0005085 "guanyl-nucleotide exchange factor activity"
evidence=IEA] InterPro:IPR027048 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005737 GO:GO:0005730 GO:GO:0045111 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0005085 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 GO:GO:0050709
eggNOG:COG5184 GeneTree:ENSGT00700000104160 EMBL:BC104610
IPI:IPI00689945 RefSeq:NP_001069489.1 UniGene:Bt.1247
ProteinModelPortal:Q3MHW0 STRING:Q3MHW0 PRIDE:Q3MHW0
Ensembl:ENSBTAT00000007022 GeneID:534377 KEGG:bta:534377 CTD:26297
HOGENOM:HOG000154414 HOVERGEN:HBG051746 InParanoid:Q3MHW0 KO:K15421
OMA:NIWAPKP OrthoDB:EOG4J1183 NextBio:20876380
PANTHER:PTHR22870:SF7 Uniprot:Q3MHW0
Length = 464
Score = 318 (117.0 bits), Expect = 6.4e-27, P = 6.4e-27
Identities = 133/479 (27%), Positives = 194/479 (40%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
+P +A++ WG N GQ G G + + +QL F C +G R I G H+A
Sbjct: 11 VPTAAALFAWGANSYGQLGL-GHKEDVLSAQQLSD--F-CKSGCIKR---ITGGGGHSAV 63
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND 136
V +G+LF G N+ GQLG G E + K L ++ ++CG T + E +
Sbjct: 64 VTDEGSLFVCGLNKDGQLGLGHTEEVLYFTPCKSLLGCAIQQVACGWDFTIILTE----N 119
Query: 137 GTISTSRLWVWGQNQGSNFPRLFWGAFTPNTI------ICQVSCGSVHVVALSECGLLQA 190
G + + +GQ + PR P I + ++ G H +A + G +
Sbjct: 120 GQVLSCGSNSFGQLGVPHGPRR---CVIPQAIELLREKVVSIAAGLRHALAATASGTVFQ 176
Query: 191 WGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSC---GEYHSAAVSENG 247
WG GR + C G P + AK LE +Q C G HSA++++ G
Sbjct: 177 WGTG-LASSGRRL-CPGQTLPLFLT--AKEPSTVTGLEN-SQAVCVLAGSDHSASLTDAG 231
Query: 248 EVYTWGLGSVGQLGHCSLQSGDKELLPRRVVA--LDGIFIKDVACGGVHSCALTSKGALY 305
E+Y WG GQL Q+ LLP+R+ A I V G H A T G ++
Sbjct: 232 ELYVWGSNKHGQLAS---QAAFL-LLPQRIEARCFQNEKIAAVWSGWTHLVAQTVTGKVF 287
Query: 306 AWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPN------GVQLVACGHSHTLV 359
WG + GQLG +TR + + + P P+ G ++CG H L
Sbjct: 288 TWGRADYGQLGRTVETREGWESEKQDPSLPGSGPQKGTPSCLPCLTGATEISCGSEHNLA 347
Query: 360 YMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVD---WCVGEVRKLAAGGGHSAVLADACS 416
+ G H WG+N +G + W P PV + +G + G GHS L C
Sbjct: 348 VI-GGVCHSWGWNEHGMCGDGTEADVWAPKPVPGLRFFLG--LHVGCGAGHSLAL---CQ 401
Query: 417 LKELCEFRLAESVTLSNASEIEDVASRTGSEALARLCERLREHSLHGDEFDCDDDTRNG 475
L L SVT + ++ S+ E ER E S D RNG
Sbjct: 402 LPALPALGQHPSVTSPSPDATKEARSQEAMEQERNQKERHAETSPQAQS----DRFRNG 456
Score = 247 (92.0 bits), Expect = 2.7e-18, P = 2.7e-18
Identities = 92/326 (28%), Positives = 147/326 (45%)
Query: 73 HTA-AVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQL-QSEFVKSISCGAHCTAAIA 130
H++ AV + LF WGAN +GQLG G +E +++ +S +K I+ G +A +
Sbjct: 6 HSSEAVPTAAALFAWGANSYGQLGLGHKEDVLSAQQLSDFCKSGCIKRITGGGGHSAVVT 65
Query: 131 EPRENDGTISTSRLWVWGQNQGSNFPRLFWGAFTP-NTII-C---QVSCGSVHVVALSEC 185
+ +G++ L GQ + + + FTP +++ C QV+CG + L+E
Sbjct: 66 D----EGSLFVCGLNKDGQLGLGHTEEVLY--FTPCKSLLGCAIQQVACGWDFTIILTEN 119
Query: 186 GLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPEL--EKITQVSCGEYHSAAV 243
G + + G N +GQLG GPR + +A EL EK+ ++ G H+ A
Sbjct: 120 GQVLSCGSNSFGQLGVP------HGPRRC-----VIPQAIELLREKVVSIAAGLRHALAA 168
Query: 244 SENGEVYTWGLGSVGQLGH--CSLQSGDKELLPRRVVALDGIFIKDVAC---GGVHSCAL 298
+ +G V+ WG G + G C Q+ L + + G+ C G HS +L
Sbjct: 169 TASGTVFQWGTG-LASSGRRLCPGQTLPLFLTAKEPSTVTGLENSQAVCVLAGSDHSASL 227
Query: 299 TSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTY-FRNIPILVVPNGVQLVACGHSHT 357
T G LY WG ++ GQL +F L+P + F+N I V +G +H
Sbjct: 228 TDAGELYVWGSNKHGQLA---SQAAFLLLPQRIEARCFQNEKIAAVWSG-------WTHL 277
Query: 358 LVYMRDGRIHGWGYNSYGQAANEKST 383
+ G++ WG YGQ T
Sbjct: 278 VAQTVTGKVFTWGRADYGQLGRTVET 303
Score = 171 (65.3 bits), Expect = 9.5e-10, P = 9.5e-10
Identities = 76/286 (26%), Positives = 124/286 (43%)
Query: 131 EPRENDGTISTSRLWVWGQNQ----GSNFPRLFWGA-----FTPNTIICQVSCGSVHVVA 181
EP ++ + + L+ WG N G A F + I +++ G H
Sbjct: 4 EPHSSEAVPTAAALFAWGANSYGQLGLGHKEDVLSAQQLSDFCKSGCIKRITGGGGHSAV 63
Query: 182 LSECGLLQAWGYNEYGQLGRGITCEGLQ-GP-RVIKGYAKFLDEAPELEKITQVSCGEYH 239
+++ G L G N+ GQLG G T E L P + + G A I QV+CG
Sbjct: 64 VTDEGSLFVCGLNKDGQLGLGHTEEVLYFTPCKSLLGCA-----------IQQVACGWDF 112
Query: 240 SAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALT 299
+ ++ENG+V + G S GQLG + G + + + + L + +A G H+ A T
Sbjct: 113 TIILTENGQVLSCGSNSFGQLG---VPHGPRRCVIPQAIELLREKVVSIAAGLRHALAAT 169
Query: 300 SKGALYAWG-GSQAGQLGLGP-QTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHT 357
+ G ++ WG G + L P QT L E T + L V ++A G H+
Sbjct: 170 ASGTVFQWGTGLASSGRRLCPGQTLPLFLTAKEPST----VTGLENSQAVCVLA-GSDHS 224
Query: 358 LVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAA 403
G ++ WG N +GQ A++ + + P ++ + K+AA
Sbjct: 225 ASLTDAGELYVWGSNKHGQLASQ-AAFLLLPQRIEARCFQNEKIAA 269
>TAIR|locus:2159295 [details] [associations]
symbol:RUG3 "RCC1/UVR8/GEF-like 3" species:3702
"Arabidopsis thaliana" [GO:0005737 "cytoplasm" evidence=ISM]
[GO:0008536 "Ran GTPase binding" evidence=ISS] [GO:0005739
"mitochondrion" evidence=IDA] [GO:0008380 "RNA splicing"
evidence=IMP] [GO:0032981 "mitochondrial respiratory chain complex
I assembly" evidence=IMP] INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005739 EMBL:CP002688 GO:GO:0008380 EMBL:AB015472
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0032981
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 UniGene:At.29139
UniGene:At.50545 HSSP:P18754 IPI:IPI00532631 RefSeq:NP_200895.2
ProteinModelPortal:Q9FJG9 SMR:Q9FJG9 PRIDE:Q9FJG9
EnsemblPlants:AT5G60870.1 GeneID:836208 KEGG:ath:AT5G60870
TAIR:At5g60870 HOGENOM:HOG000030010 InParanoid:Q9FJG9 OMA:ISCGLFH
PhylomeDB:Q9FJG9 ProtClustDB:CLSN2681113 Genevestigator:Q9FJG9
Uniprot:Q9FJG9
Length = 445
Score = 315 (115.9 bits), Expect = 8.3e-27, P = 8.3e-27
Identities = 111/353 (31%), Positives = 161/353 (45%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+++WG G+ G G+E + +P P LF + R IA G H+ A+ G
Sbjct: 121 LWIWGKGDGGRLGF-GQENSVFVPNLNP--LF---EEHSIRC--IALGGLHSVALTHQGD 172
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISC-GAHCTAAIAEPRENDGTIST 141
+FTWG FG LG P +V + +I+ G H TAAI E E
Sbjct: 173 VFTWGYGGFGALGHKVYTRELVPRRVDDSWDCKISAIATSGTH-TAAITESGE------- 224
Query: 142 SRLWVWGQNQGSNF--------PRLFWGAFTPNTI------ICQVSCGSVHVVALSECGL 187
L++WG+ +G P G P+ + + VSCG +AL++ G
Sbjct: 225 --LYMWGREEGDGRLGLGPGRGPNEGGGLSVPSKVKALTVPVASVSCGGFFTMALTKEGQ 282
Query: 188 LQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELE--KITQVSCGEYHSAAVSE 245
L WG N +LGRG G + P + P LE +ITQ++CG YHS A++E
Sbjct: 283 LWNWGANSNYELGRGDNLGGWE-PMPV----------PSLEGVRITQIACGGYHSLALTE 331
Query: 246 NGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALY 305
G+V +WG G GQLG SL++ + +P + AL I +A GG S A+T G L+
Sbjct: 332 EGKVLSWGHGGHGQLGSSSLRN---QKVPTEIEALADKKIVFIASGGSSSAAITDGGELW 388
Query: 306 AWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTL 358
WG ++ QLG+ P P E + F P+ V ++ G SH L
Sbjct: 389 MWGNAKDFQLGV-PGLPEIQTTPVEVN--FLTEEDECQPHKVISISIGASHAL 438
Score = 304 (112.1 bits), Expect = 2.8e-25, P = 2.8e-25
Identities = 104/364 (28%), Positives = 162/364 (44%)
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRE-------- 134
LF+WG GQLG G EE R +P V L +S S A+
Sbjct: 50 LFSWGRGASGQLGGGIEEIRMYPSPVANLLFRSDQSFSLAQTPGRIDADSSSFRIGISCG 109
Query: 135 --NDGTISTSRLWVWGQNQGSNFPRLFWG----AFTPNT-------IICQVSCGSVHVVA 181
+ G LW+WG+ G RL +G F PN I ++ G +H VA
Sbjct: 110 LFHSGLTIDGDLWIWGKGDGG---RLGFGQENSVFVPNLNPLFEEHSIRCIALGGLHSVA 166
Query: 182 LSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSA 241
L+ G + WGY +G LG + L RV D++ + KI+ ++ H+A
Sbjct: 167 LTHQGDVFTWGYGGFGALGHKVYTRELVPRRV--------DDSWDC-KISAIATSGTHTA 217
Query: 242 AVSENGEVYTWGLGSV-GQLGHCSLQSGDKE----LLPRRVVALDGIFIKDVACGGVHSC 296
A++E+GE+Y WG G+LG G E +P +V AL + + V+CGG +
Sbjct: 218 AITESGELYMWGREEGDGRLG-LGPGRGPNEGGGLSVPSKVKALT-VPVASVSCGGFFTM 275
Query: 297 ALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQL--VACGH 354
ALT +G L+ WG + +LG G + +P +P L GV++ +ACG
Sbjct: 276 ALTKEGQLWNWGANSNYELGRGDNLGGWEPMP---------VPSL---EGVRITQIACGG 323
Query: 355 SHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLAD 413
H+L +G++ WG+ +GQ + P+ ++ + + +A+GG SA + D
Sbjct: 324 YHSLALTEEGKVLSWGHGGHGQLGSSSLRNQKVPTEIEALADKKIVFIASGGSSSAAITD 383
Query: 414 ACSL 417
L
Sbjct: 384 GGEL 387
Score = 268 (99.4 bits), Expect = 8.1e-21, P = 8.1e-21
Identities = 93/329 (28%), Positives = 150/329 (45%)
Query: 10 TARPVDNIPAKSAIYVWGYNHSGQTGRKGRERQLRI-PKQLPPELFGC---------P-- 57
T+ +D+ P ++ WG SGQ G G ++R+ P + LF P
Sbjct: 37 TSPDIDSDPVTLQLFSWGRGASGQLG--GGIEEIRMYPSPVANLLFRSDQSFSLAQTPGR 94
Query: 58 --AGANSRWLDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEF 115
A ++S + I+CG H+ + DG L+ WG + G+LG G E P +
Sbjct: 95 IDADSSSFRIGISCGLFHSG-LTIDGDLWIWGKGDGGRLGFGQENSVFVPNLNPLFEEHS 153
Query: 116 VKSISCGAHCTAAIAEPRENDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTII----CQ 171
++ I+ G + A+ + G + T W +G G+ +++ P + C+
Sbjct: 154 IRCIALGGLHSVALT----HQGDVFT---WGYG-GFGALGHKVYTRELVPRRVDDSWDCK 205
Query: 172 VSC---GSVHVVALSECGLLQAWGYNEY-GQLGRGITCEGLQGPRVIKGYAKFLDEAPEL 227
+S H A++E G L WG E G+LG G G +GP G +
Sbjct: 206 ISAIATSGTHTAAITESGELYMWGREEGDGRLGLG---PG-RGPNEGGGLSVPSKVKALT 261
Query: 228 EKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKD 287
+ VSCG + + A+++ G+++ WG S +LG G E +P V +L+G+ I
Sbjct: 262 VPVASVSCGGFFTMALTKEGQLWNWGANSNYELGRGD-NLGGWEPMP--VPSLEGVRITQ 318
Query: 288 VACGGVHSCALTSKGALYAWGGSQAGQLG 316
+ACGG HS ALT +G + +WG GQLG
Sbjct: 319 IACGGYHSLALTEEGKVLSWGHGGHGQLG 347
>MGI|MGI:1351630 [details] [associations]
symbol:Sergef "secretion regulating guanine nucleotide
exchange factor" species:10090 "Mus musculus" [GO:0005085
"guanyl-nucleotide exchange factor activity" evidence=IEA]
[GO:0005087 "Ran guanyl-nucleotide exchange factor activity"
evidence=ISA] [GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0005737
"cytoplasm" evidence=ISO;IDA] [GO:0050709 "negative regulation of
protein secretion" evidence=ISO] [GO:0050790 "regulation of
catalytic activity" evidence=ISA] InterPro:IPR027048
MGI:MGI:1351630 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005634
GO:GO:0005737 GO:GO:0005730 GO:GO:0045111 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0005087 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 GO:GO:0050709
eggNOG:COG5184 GeneTree:ENSGT00700000104160 CTD:26297
HOGENOM:HOG000154414 HOVERGEN:HBG051746 KO:K15421 OMA:NIWAPKP
OrthoDB:EOG4J1183 PANTHER:PTHR22870:SF7 EMBL:AJ243952 EMBL:AK145819
EMBL:AK147848 EMBL:BC049603 EMBL:BC119533 EMBL:BC119534
IPI:IPI00134816 RefSeq:NP_038817.1 UniGene:Mm.76659
ProteinModelPortal:Q80YD6 SMR:Q80YD6 STRING:Q80YD6 PRIDE:Q80YD6
Ensembl:ENSMUST00000033127 GeneID:27414 KEGG:mmu:27414
UCSC:uc009gyp.2 InParanoid:Q80YD6 NextBio:305446 Bgee:Q80YD6
Genevestigator:Q80YD6 GermOnline:ENSMUSG00000030839 Uniprot:Q80YD6
Length = 464
Score = 315 (115.9 bits), Expect = 1.7e-26, P = 1.7e-26
Identities = 124/425 (29%), Positives = 180/425 (42%)
Query: 15 DNIPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHT 74
+ + A + ++ WG N GQ G G + + +P+QL F C AG + G H+
Sbjct: 9 ETVSAAAVLFAWGANSYGQLGL-GHKEDVFLPQQLSD--F-CQAGCIK---SVTGGGGHS 61
Query: 75 AAVASDGTLFTWGANEFGQLGDG-TEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPR 133
A V G LF G N+ GQLG G TEE + K L+ ++ ++CG T + E
Sbjct: 62 AVVTDGGDLFVCGLNKDGQLGLGHTEEVLRFTI-CKPLRGCPIRQVACGWDFTIMLTEK- 119
Query: 134 ENDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIIC---QVSC---GSVHVVALSECGL 187
G + + +GQ + PR P I C +V C G H +A + G
Sbjct: 120 ---GQVLSCGSNAFGQLGVPHGPRK---CVVPQAIECLREKVVCVAAGLRHALATTATGS 173
Query: 188 LQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSC--GEYHSAAVSE 245
+ WG GR + C G P + AK LE T V G HSA++++
Sbjct: 174 VFQWGTG-LASSGRRL-CPGQNLPLFLT--AKEPSRVTGLENSTAVCAVAGSDHSASLTD 229
Query: 246 NGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVA--LDGIFIKDVACGGVHSCALTSKGA 303
GE+Y WG GQL ++ LP+R+ A + V G H A T G
Sbjct: 230 TGELYVWGRNKHGQLASRAVFLP----LPQRIEAHYFQDEKVTAVWSGWTHLVAKTETGK 285
Query: 304 LYAWGGSQAGQLG--LGPQTRSFSLIPNESDTYFRNIPILVVPN------GVQLVACGHS 355
++ WG + GQLG L P + +S F+ P VP+ G ++CG
Sbjct: 286 VFTWGRADYGQLGRRLEPPEAQ-KPVEQDSSLAFQG-PQNSVPSPLHCLTGATEISCGSE 343
Query: 356 HTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKL---AAGGGHSAVLA 412
H L +RD + WG+N +G + + W P+PV +L G GHS LA
Sbjct: 344 HNLAVIRD-KCCSWGWNEHGMCGDGTESNVWTPTPVQALPPSPSRLLLVGCGAGHS--LA 400
Query: 413 DACSL 417
C L
Sbjct: 401 -VCQL 404
Score = 131 (51.2 bits), Expect = 2.5e-05, P = 2.5e-05
Identities = 53/174 (30%), Positives = 77/174 (44%)
Query: 240 SAAVSENGEVYTWGLGSVGQLGHCSLQSGDKE--LLPRRVVAL-DGIFIKDVACGGVHSC 296
S VS ++ WG S GQLG G KE LP+++ IK V GG HS
Sbjct: 8 SETVSAAAVLFAWGANSYGQLG-----LGHKEDVFLPQQLSDFCQAGCIKSVTGGGGHSA 62
Query: 297 ALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSH 356
+T G L+ G ++ GQLGLG T + P+ P ++ VACG
Sbjct: 63 VVTDGGDLFVCGLNKDGQLGLGHTEEVLRF------TICK--PLRGCP--IRQVACGWDF 112
Query: 357 TLVYMRDGRIHGWGYNSYGQ-AANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHS 408
T++ G++ G N++GQ P ++ C+ E V +AAG H+
Sbjct: 113 TIMLTEKGQVLSCGSNAFGQLGVPHGPRKCVVPQAIE-CLREKVVCVAAGLRHA 165
>UNIPROTKB|Q74DR4 [details] [associations]
symbol:GSU1251 "ATS1 domain repeat protein" species:243231
"Geobacter sulfurreducens PCA" [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
INTERPRO:IPR000408 Pfam:PF00415 EMBL:AE017180
GenomeReviews:AE017180_GR Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012
Gene3D:2.60.40.360 InterPro:IPR008962 InterPro:IPR011040
SUPFAM:SSF50939 RefSeq:NP_952304.1 ProteinModelPortal:Q74DR4
GeneID:2688149 KEGG:gsu:GSU1251 PATRIC:22025273
HOGENOM:HOG000144307 OMA:QADGTLW
BioCyc:GSUL243231:GH27-1279-MONOMER Uniprot:Q74DR4
Length = 2082
Score = 324 (119.1 bits), Expect = 6.2e-26, P = 6.2e-26
Identities = 113/396 (28%), Positives = 165/396 (41%)
Query: 19 AKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVA 78
+ ++ WG N SGQ G G P +P + G GA + W A G H+ AV
Sbjct: 415 SNGTLWAWGGNASGQLG-DGTTT----PSAIPVPVVG---GAGN-WRTTATGTAHSVAVR 465
Query: 79 SDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGT 138
+DGTL+ WG N GQLG G+ P+++ S G TA + G
Sbjct: 466 ADGTLWAWGDNSSGQLGIGSTVAASTPQQIT-----VTNPASAGNDWTAVAGGGAHSLGL 520
Query: 139 ISTSRLWVWGQNQGSNFPRLFWGAFTPN-TIICQ---------------VSCGSVHVVAL 182
+ LW WG N F +L G T N T Q V+ G V +AL
Sbjct: 521 KADGTLWSWGDN---TFGQLGDGTGTSNRTTPVQIVTGNPGNFDRNWVAVAAGGVFSLAL 577
Query: 183 SECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGY-AKFLDEAPELEKITQ----VSCGE 237
G + WG N QLG T + P + A+ +P ++ G+
Sbjct: 578 QADGTIWTWGDNSLLQLG---TDPAMLTPATQRNVPAQLAVASPPSTAFNSSWVAIAAGQ 634
Query: 238 YHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCA 297
H ++ +G ++ WG SVGQLG+ + P +V+ +G+ +A G HS A
Sbjct: 635 DHGLSLQADGTLWAWGANSVGQLGNGVTTA---TFTPVQVINAEGVPYVSLAAGTSHSLA 691
Query: 298 LTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNI----PILVVPNGVQLVACG 353
S G L+AWG + +GQLG GP + + T I P+ + + A G
Sbjct: 692 GRSDGTLWAWGNNTSGQLGTGPHPGDADPLNPQPHTVPARILTSNPVSAADDWLVATA-G 750
Query: 354 HSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPS 389
SH+ +G + WG N+ GQ N +T A P+
Sbjct: 751 GSHSAALKSNGTLWTWGQNTSGQLGNGTTTEADIPT 786
Score = 314 (115.6 bits), Expect = 9.9e-25, P = 9.9e-25
Identities = 110/347 (31%), Positives = 155/347 (44%)
Query: 10 TARPVDNIPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIAC 69
TA V + A ++ WG N SGQ G G P+Q+ PA A + W +A
Sbjct: 458 TAHSVA-VRADGTLWAWGDNSSGQLGI-GSTVAASTPQQITVTN---PASAGNDWTAVAG 512
Query: 70 GHEHTAAVASDGTLFTWGANEFGQLGDGT-EEGRKHPEK-VKQLQSEFVKS-ISCGAHCT 126
G H+ + +DGTL++WG N FGQLGDGT R P + V F ++ ++ A
Sbjct: 513 GGAHSLGLKADGTLWSWGDNTFGQLGDGTGTSNRTTPVQIVTGNPGNFDRNWVAVAAGGV 572
Query: 127 AAIAEPRENDGTISTSRLWVWGQNQ----GS-----------NFPRLFWGAFTPNTII-- 169
++A + DGTI W WG N G+ N P A P+T
Sbjct: 573 FSLA--LQADGTI-----WTWGDNSLLQLGTDPAMLTPATQRNVPAQLAVASPPSTAFNS 625
Query: 170 --CQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPEL 227
++ G H ++L G L AWG N GQLG G+T +VI + P +
Sbjct: 626 SWVAIAAGQDHGLSLQADGTLWAWGANSVGQLGNGVTTATFTPVQVINA-----EGVPYV 680
Query: 228 EKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELL-------PRRVVAL 280
++ G HS A +G ++ WG + GQLG GD + L P R++
Sbjct: 681 S----LAAGTSHSLAGRSDGTLWAWGNNTSGQLG-TGPHPGDADPLNPQPHTVPARILTS 735
Query: 281 DGIFIKD---VA-CGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRS 323
+ + D VA GG HS AL S G L+ WG + +GQLG G T +
Sbjct: 736 NPVSAADDWLVATAGGSHSAALKSNGTLWTWGQNTSGQLGNGTTTEA 782
Score = 297 (109.6 bits), Expect = 9.3e-23, P = 9.3e-23
Identities = 118/402 (29%), Positives = 168/402 (41%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+ WG N G G G + + P L P + + IA G + +V ++GT
Sbjct: 315 VSAWGNNAQGAVG-DGT-----VANRSTPTLIVAPVTLVNN-VAIAAGTGVSFSVLANGT 367
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
+F WG N GQLG+GT P + S ++ G A + ++GT
Sbjct: 368 VFGWGGNGAGQLGNGTFGAVTAPTVLSAGASAWL-----GVEPGGAFSLGLRSNGT---- 418
Query: 143 RLWVWGQNQGSNFPRLFWGAFTPNTIICQV----------SCGSVHVVALSECGLLQAWG 192
LW WG N +L G TP+ I V + G+ H VA+ G L AWG
Sbjct: 419 -LWAWGGNASG---QLGDGTTTPSAIPVPVVGGAGNWRTTATGTAHSVAVRADGTLWAWG 474
Query: 193 YNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTW 252
N GQLG G T P+ I + A T V+ G HS + +G +++W
Sbjct: 475 DNSSGQLGIGSTVAA-STPQQIT----VTNPASAGNDWTAVAGGGAHSLGLKADGTLWSW 529
Query: 253 GLGSVGQLGHCSLQSGDKELLPRRVVALD-GIFIKD---VACGGVHSCALTSKGALYAWG 308
G + GQLG + S P ++V + G F ++ VA GGV S AL + G ++ WG
Sbjct: 530 GDNTFGQLGDGTGTSN--RTTPVQIVTGNPGNFDRNWVAVAAGGVFSLALQADGTIWTWG 587
Query: 309 GSQAGQLGLGPQTRSFSLIPN-ESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIH 367
+ QLG P + + N + + P + +A G H L DG +
Sbjct: 588 DNSLLQLGTDPAMLTPATQRNVPAQLAVASPPSTAFNSSWVAIAAGQDHGLSLQADGTLW 647
Query: 368 GWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHS 408
WG NS GQ N +T + P V G LAAG HS
Sbjct: 648 AWGANSVGQLGNGVTTATFTPVQVINAEGVPYVSLAAGTSHS 689
Score = 288 (106.4 bits), Expect = 9.7e-22, P = 9.7e-22
Identities = 107/377 (28%), Positives = 161/377 (42%)
Query: 16 NIPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTA 75
++ A ++ WG N +GQ G G + P L AGA S WL + G +
Sbjct: 361 SVLANGTVFGWGGNGAGQLGN-GTFGAVTAPTVLS-------AGA-SAWLGVEPGGAFSL 411
Query: 76 AVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREN 135
+ S+GTL+ WG N GQLGDGT P V + + + AH A A+
Sbjct: 412 GLRSNGTLWAWGGNASGQLGDGTTTPSAIPVPVVGGAGNWRTTATGTAHSVAVRADGTLW 471
Query: 136 D-GTISTSRLWVWGQNQGSNFPRLFW--GAFTPNTIICQVSCGSVHVVALSECGLLQAWG 192
G S+ +L + G ++ P+ + V+ G H + L G L +WG
Sbjct: 472 AWGDNSSGQLGI-GSTVAASTPQQITVTNPASAGNDWTAVAGGGAHSLGLKADGTLWSWG 530
Query: 193 YNEYGQLGRGITCEGLQGP-RVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYT 251
N +GQLG G P +++ G D V+ G S A+ +G ++T
Sbjct: 531 DNTFGQLGDGTGTSNRTTPVQIVTGNPGNFDR-----NWVAVAAGGVFSLALQADGTIWT 585
Query: 252 WGLGSVGQLGH--CSLQSGDKELLPRRVV-------ALDGIFIKDVACGGVHSCALTSKG 302
WG S+ QLG L + +P ++ A + ++ +A G H +L + G
Sbjct: 586 WGDNSLLQLGTDPAMLTPATQRNVPAQLAVASPPSTAFNSSWVA-IAAGQDHGLSLQADG 644
Query: 303 ALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVV-PNGVQLV--ACGHSHTLV 359
L+AWG + GQLG G T +F+ P+ V+ GV V A G SH+L
Sbjct: 645 TLWAWGANSVGQLGNGVTTATFT-------------PVQVINAEGVPYVSLAAGTSHSLA 691
Query: 360 YMRDGRIHGWGYNSYGQ 376
DG + WG N+ GQ
Sbjct: 692 GRSDGTLWAWGNNTSGQ 708
Score = 284 (105.0 bits), Expect = 2.8e-21, P = 2.8e-21
Identities = 96/317 (30%), Positives = 140/317 (44%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
I A +++ WG N GQ G+ QL K P + G + W+ ++ G +
Sbjct: 95 IKADGSLWAWGSNLFGQLGQPLVNGQLATNKFSPIRI-----GTGNDWVAVSAGELTSFG 149
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKV--KQLQS-EFVKSISCGAHCTAAIAEPR 133
+ DGTL++WG N FG+LGDGT R P +V L + +V + G H A A
Sbjct: 150 LKGDGTLWSWGNNLFGELGDGTTVSRPQPVQVVADPLSNGRYVAVAAGGEHALALQA--- 206
Query: 134 ENDGTISTSRLWVWGQNQGSNFPRLFWGAF---TPNTIICQ-----VSCGSVHVVALSEC 185
DGT LW WG N G TP I +S G +H VAL
Sbjct: 207 --DGT-----LWAWGANLTGQLGTGGTGILPNPTPLKIGTDRDWTAISAGEMHSVALKAD 259
Query: 186 GLLQAWGYNEYGQLGRGITCEG--LQGP-RVIKGYAKFLDEAPELEKITQVSCGEYHSAA 242
G L +WG N +G+LG G+ G + P RV G ++ G H+ A
Sbjct: 260 GSLWSWGQNLFGELGNGVALPGANVTTPTRVGTG-----------SDWVAIAAGALHTVA 308
Query: 243 VSENGEVYTWGLGSVGQLGHCSLQS-GDKELLPRRVVALDGIFIKDVACGGVHSCALTSK 301
+ NG V WG + G +G ++ + L+ V ++ + I A G S ++ +
Sbjct: 309 LHRNGTVSAWGNNAQGAVGDGTVANRSTPTLIVAPVTLVNNVAI---AAGTGVSFSVLAN 365
Query: 302 GALYAWGGSQAGQLGLG 318
G ++ WGG+ AGQLG G
Sbjct: 366 GTVFGWGGNGAGQLGNG 382
Score = 268 (99.4 bits), Expect = 1.7e-19, P = 1.7e-19
Identities = 109/374 (29%), Positives = 150/374 (40%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPA--GANSRWLDIACGHEHT 74
+ A +++ WG N G+ G G LP P G S W+ IA G HT
Sbjct: 256 LKADGSLWSWGQNLFGELGN-G--------VALPGANVTTPTRVGTGSDWVAIAAGALHT 306
Query: 75 AAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRE 134
A+ +GT+ WG N G +GDGT R P + + V +++ A + +
Sbjct: 307 VALHRNGTVSAWGNNAQGAVGDGTVANRSTPTLIVAPVT-LVNNVAIAAGTGVSFS---- 361
Query: 135 NDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQ-------VSCGSVHVVALSECGL 187
++ ++ WG N +GA T T++ V G + L G
Sbjct: 362 ---VLANGTVFGWGGNGAGQLGNGTFGAVTAPTVLSAGASAWLGVEPGGAFSLGLRSNGT 418
Query: 188 LQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENG 247
L AWG N GQLG G T V+ G + A G HS AV +G
Sbjct: 419 LWAWGGNASGQLGDGTTTPSAIPVPVVGGAGNWRTTAT----------GTAHSVAVRADG 468
Query: 248 EVYTWGLGSVGQLGHCS-LQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYA 306
++ WG S GQLG S + + + + A G VA GG HS L + G L++
Sbjct: 469 TLWAWGDNSSGQLGIGSTVAASTPQQITVTNPASAGNDWTAVAGGGAHSLGLKADGTLWS 528
Query: 307 WGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRI 366
WG + GQLG G T S P + T P N V VA G +L DG I
Sbjct: 529 WGDNTFGQLGDGTGT-SNRTTPVQIVT---GNPGNFDRNWVA-VAAGGVFSLALQADGTI 583
Query: 367 HGWGYNSYGQAANE 380
WG NS Q +
Sbjct: 584 WTWGDNSLLQLGTD 597
Score = 255 (94.8 bits), Expect = 4.8e-18, P = 4.8e-18
Identities = 86/278 (30%), Positives = 127/278 (45%)
Query: 55 GCPAGANSRWLDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSE 114
G PA S +A G H + SDGTL+ G+N+FGQLGDGT R P +V
Sbjct: 25 GAPAAGWSAVPHVAAGGNHVLTLRSDGTLWAAGSNQFGQLGDGTGINRTSPVQVPGTW-- 82
Query: 115 FVKSISCGAHCTAAIAEPRENDGTISTSRLWVWGQNQGSNF--P----RLFWGAFTPNTI 168
K+++ G + I + DG+ LW WG N P +L F+P I
Sbjct: 83 --KTVAAGTTHSLGI----KADGS-----LWAWGSNLFGQLGQPLVNGQLATNKFSPIRI 131
Query: 169 -----ICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDE 223
VS G + L G L +WG N +G+LG G T + P+ ++ A L
Sbjct: 132 GTGNDWVAVSAGELTSFGLKGDGTLWSWGNNLFGELGDGTT---VSRPQPVQVVADPLSN 188
Query: 224 APELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGI 283
+ V+ G H+ A+ +G ++ WG GQLG +G +LP G
Sbjct: 189 G----RYVAVAAGGEHALALQADGTLWAWGANLTGQLG-----TGGTGILPNPTPLKIGT 239
Query: 284 FIKD---VACGGVHSCALTSKGALYAWGGSQAGQLGLG 318
+D ++ G +HS AL + G+L++WG + G+LG G
Sbjct: 240 D-RDWTAISAGEMHSVALKADGSLWSWGQNLFGELGNG 276
Score = 172 (65.6 bits), Expect = 5.9e-09, P = 5.9e-09
Identities = 70/249 (28%), Positives = 104/249 (41%)
Query: 140 STSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQL 199
S LW G NQ F +L G T QV G+ VA G + G G L
Sbjct: 49 SDGTLWAAGSNQ---FGQLGDGTGINRTSPVQVP-GTWKTVA---AGTTHSLGIKADGSL 101
Query: 200 GR-GITCEGLQGPRVIKGYAKFLDEAPEL----EKITQVSCGEYHSAAVSENGEVYTWGL 254
G G G ++ G +P VS GE S + +G +++WG
Sbjct: 102 WAWGSNLFGQLGQPLVNGQLATNKFSPIRIGTGNDWVAVSAGELTSFGLKGDGTLWSWGN 161
Query: 255 GSVGQLGHCSLQSGDKELLPRRVVA---LDGIFIKDVACGGVHSCALTSKGALYAWGGSQ 311
G+LG + S + P +VVA +G ++ VA GG H+ AL + G L+AWG +
Sbjct: 162 NLFGELGDGTTVSRPQ---PVQVVADPLSNGRYVA-VAAGGEHALALQADGTLWAWGANL 217
Query: 312 AGQLGLGPQTRSFSLIPNESDTYFRNIPILV-VPNGVQLVACGHSHTLVYMRDGRIHGWG 370
GQLG G ++PN + P+ + ++ G H++ DG + WG
Sbjct: 218 TGQLGTG----GTGILPNPT-------PLKIGTDRDWTAISAGEMHSVALKADGSLWSWG 266
Query: 371 YNSYGQAAN 379
N +G+ N
Sbjct: 267 QNLFGELGN 275
Score = 153 (58.9 bits), Expect = 6.8e-07, P = 6.8e-07
Identities = 65/239 (27%), Positives = 97/239 (40%)
Query: 233 VSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSL--QSGDKELLPRRVVALDGIFIKDVAC 290
V+ G HS + +G ++ WG GQLG + Q + P R+ ++ V+
Sbjct: 85 VAAGTTHSLGIKADGSLWAWGSNLFGQLGQPLVNGQLATNKFSPIRI-GTGNDWVA-VSA 142
Query: 291 GGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQL- 349
G + S L G L++WG + G+LG G + +D P+ NG +
Sbjct: 143 GELTSFGLKGDGTLWSWGNNLFGELGDGTTVSRPQPVQVVAD------PL---SNGRYVA 193
Query: 350 VACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRK---LAAGGG 406
VA G H L DG + WG N GQ + P+P+ +G R ++AG
Sbjct: 194 VAAGGEHALALQADGTLWAWGANLTGQLGTGGTGILPNPTPLK--IGTDRDWTAISAGEM 251
Query: 407 HSAVL-ADAC--SLKELCEFRLAESVTLSNASEIEDVASRTGSEALARLCERLREHSLH 462
HS L AD S + L V L A+ TGS+ +A L +LH
Sbjct: 252 HSVALKADGSLWSWGQNLFGELGNGVALPGANVTTPTRVGTGSDWVAIAAGALHTVALH 310
Score = 148 (57.2 bits), Expect = 2.4e-06, P = 2.4e-06
Identities = 52/184 (28%), Positives = 83/184 (45%)
Query: 233 VSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQS-GDKELLPRRVVALDGIFIKDVACG 291
++ G H+ A+ NG V WG + G +G ++ + L+ V ++ + I A G
Sbjct: 299 IAAGALHTVALHRNGTVSAWGNNAQGAVGDGTVANRSTPTLIVAPVTLVNNVAI---AAG 355
Query: 292 GVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQL-V 350
S ++ + G ++ WGG+ AGQLG G +F + + +L L V
Sbjct: 356 TGVSFSVLANGTVFGWGGNGAGQLGNG----TFGAVTAPT--------VLSAGASAWLGV 403
Query: 351 ACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHS-A 409
G + +L +G + WG N+ GQ + +T + P PV G R A G HS A
Sbjct: 404 EPGGAFSLGLRSNGTLWAWGGNASGQLGDGTTTPSAIPVPVVGGAGNWRTTATGTAHSVA 463
Query: 410 VLAD 413
V AD
Sbjct: 464 VRAD 467
>TIGR_CMR|GSU_1251 [details] [associations]
symbol:GSU_1251 "BNR repeat domain protein" species:243231
"Geobacter sulfurreducens PCA" [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
INTERPRO:IPR000408 Pfam:PF00415 EMBL:AE017180
GenomeReviews:AE017180_GR Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012
Gene3D:2.60.40.360 InterPro:IPR008962 InterPro:IPR011040
SUPFAM:SSF50939 RefSeq:NP_952304.1 ProteinModelPortal:Q74DR4
GeneID:2688149 KEGG:gsu:GSU1251 PATRIC:22025273
HOGENOM:HOG000144307 OMA:QADGTLW
BioCyc:GSUL243231:GH27-1279-MONOMER Uniprot:Q74DR4
Length = 2082
Score = 324 (119.1 bits), Expect = 6.2e-26, P = 6.2e-26
Identities = 113/396 (28%), Positives = 165/396 (41%)
Query: 19 AKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVA 78
+ ++ WG N SGQ G G P +P + G GA + W A G H+ AV
Sbjct: 415 SNGTLWAWGGNASGQLG-DGTTT----PSAIPVPVVG---GAGN-WRTTATGTAHSVAVR 465
Query: 79 SDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGT 138
+DGTL+ WG N GQLG G+ P+++ S G TA + G
Sbjct: 466 ADGTLWAWGDNSSGQLGIGSTVAASTPQQIT-----VTNPASAGNDWTAVAGGGAHSLGL 520
Query: 139 ISTSRLWVWGQNQGSNFPRLFWGAFTPN-TIICQ---------------VSCGSVHVVAL 182
+ LW WG N F +L G T N T Q V+ G V +AL
Sbjct: 521 KADGTLWSWGDN---TFGQLGDGTGTSNRTTPVQIVTGNPGNFDRNWVAVAAGGVFSLAL 577
Query: 183 SECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGY-AKFLDEAPELEKITQ----VSCGE 237
G + WG N QLG T + P + A+ +P ++ G+
Sbjct: 578 QADGTIWTWGDNSLLQLG---TDPAMLTPATQRNVPAQLAVASPPSTAFNSSWVAIAAGQ 634
Query: 238 YHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCA 297
H ++ +G ++ WG SVGQLG+ + P +V+ +G+ +A G HS A
Sbjct: 635 DHGLSLQADGTLWAWGANSVGQLGNGVTTA---TFTPVQVINAEGVPYVSLAAGTSHSLA 691
Query: 298 LTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNI----PILVVPNGVQLVACG 353
S G L+AWG + +GQLG GP + + T I P+ + + A G
Sbjct: 692 GRSDGTLWAWGNNTSGQLGTGPHPGDADPLNPQPHTVPARILTSNPVSAADDWLVATA-G 750
Query: 354 HSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPS 389
SH+ +G + WG N+ GQ N +T A P+
Sbjct: 751 GSHSAALKSNGTLWTWGQNTSGQLGNGTTTEADIPT 786
Score = 314 (115.6 bits), Expect = 9.9e-25, P = 9.9e-25
Identities = 110/347 (31%), Positives = 155/347 (44%)
Query: 10 TARPVDNIPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIAC 69
TA V + A ++ WG N SGQ G G P+Q+ PA A + W +A
Sbjct: 458 TAHSVA-VRADGTLWAWGDNSSGQLGI-GSTVAASTPQQITVTN---PASAGNDWTAVAG 512
Query: 70 GHEHTAAVASDGTLFTWGANEFGQLGDGT-EEGRKHPEK-VKQLQSEFVKS-ISCGAHCT 126
G H+ + +DGTL++WG N FGQLGDGT R P + V F ++ ++ A
Sbjct: 513 GGAHSLGLKADGTLWSWGDNTFGQLGDGTGTSNRTTPVQIVTGNPGNFDRNWVAVAAGGV 572
Query: 127 AAIAEPRENDGTISTSRLWVWGQNQ----GS-----------NFPRLFWGAFTPNTII-- 169
++A + DGTI W WG N G+ N P A P+T
Sbjct: 573 FSLA--LQADGTI-----WTWGDNSLLQLGTDPAMLTPATQRNVPAQLAVASPPSTAFNS 625
Query: 170 --CQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPEL 227
++ G H ++L G L AWG N GQLG G+T +VI + P +
Sbjct: 626 SWVAIAAGQDHGLSLQADGTLWAWGANSVGQLGNGVTTATFTPVQVINA-----EGVPYV 680
Query: 228 EKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELL-------PRRVVAL 280
++ G HS A +G ++ WG + GQLG GD + L P R++
Sbjct: 681 S----LAAGTSHSLAGRSDGTLWAWGNNTSGQLG-TGPHPGDADPLNPQPHTVPARILTS 735
Query: 281 DGIFIKD---VA-CGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRS 323
+ + D VA GG HS AL S G L+ WG + +GQLG G T +
Sbjct: 736 NPVSAADDWLVATAGGSHSAALKSNGTLWTWGQNTSGQLGNGTTTEA 782
Score = 297 (109.6 bits), Expect = 9.3e-23, P = 9.3e-23
Identities = 118/402 (29%), Positives = 168/402 (41%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+ WG N G G G + + P L P + + IA G + +V ++GT
Sbjct: 315 VSAWGNNAQGAVG-DGT-----VANRSTPTLIVAPVTLVNN-VAIAAGTGVSFSVLANGT 367
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
+F WG N GQLG+GT P + S ++ G A + ++GT
Sbjct: 368 VFGWGGNGAGQLGNGTFGAVTAPTVLSAGASAWL-----GVEPGGAFSLGLRSNGT---- 418
Query: 143 RLWVWGQNQGSNFPRLFWGAFTPNTIICQV----------SCGSVHVVALSECGLLQAWG 192
LW WG N +L G TP+ I V + G+ H VA+ G L AWG
Sbjct: 419 -LWAWGGNASG---QLGDGTTTPSAIPVPVVGGAGNWRTTATGTAHSVAVRADGTLWAWG 474
Query: 193 YNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTW 252
N GQLG G T P+ I + A T V+ G HS + +G +++W
Sbjct: 475 DNSSGQLGIGSTVAA-STPQQIT----VTNPASAGNDWTAVAGGGAHSLGLKADGTLWSW 529
Query: 253 GLGSVGQLGHCSLQSGDKELLPRRVVALD-GIFIKD---VACGGVHSCALTSKGALYAWG 308
G + GQLG + S P ++V + G F ++ VA GGV S AL + G ++ WG
Sbjct: 530 GDNTFGQLGDGTGTSN--RTTPVQIVTGNPGNFDRNWVAVAAGGVFSLALQADGTIWTWG 587
Query: 309 GSQAGQLGLGPQTRSFSLIPN-ESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIH 367
+ QLG P + + N + + P + +A G H L DG +
Sbjct: 588 DNSLLQLGTDPAMLTPATQRNVPAQLAVASPPSTAFNSSWVAIAAGQDHGLSLQADGTLW 647
Query: 368 GWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHS 408
WG NS GQ N +T + P V G LAAG HS
Sbjct: 648 AWGANSVGQLGNGVTTATFTPVQVINAEGVPYVSLAAGTSHS 689
Score = 288 (106.4 bits), Expect = 9.7e-22, P = 9.7e-22
Identities = 107/377 (28%), Positives = 161/377 (42%)
Query: 16 NIPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTA 75
++ A ++ WG N +GQ G G + P L AGA S WL + G +
Sbjct: 361 SVLANGTVFGWGGNGAGQLGN-GTFGAVTAPTVLS-------AGA-SAWLGVEPGGAFSL 411
Query: 76 AVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREN 135
+ S+GTL+ WG N GQLGDGT P V + + + AH A A+
Sbjct: 412 GLRSNGTLWAWGGNASGQLGDGTTTPSAIPVPVVGGAGNWRTTATGTAHSVAVRADGTLW 471
Query: 136 D-GTISTSRLWVWGQNQGSNFPRLFW--GAFTPNTIICQVSCGSVHVVALSECGLLQAWG 192
G S+ +L + G ++ P+ + V+ G H + L G L +WG
Sbjct: 472 AWGDNSSGQLGI-GSTVAASTPQQITVTNPASAGNDWTAVAGGGAHSLGLKADGTLWSWG 530
Query: 193 YNEYGQLGRGITCEGLQGP-RVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYT 251
N +GQLG G P +++ G D V+ G S A+ +G ++T
Sbjct: 531 DNTFGQLGDGTGTSNRTTPVQIVTGNPGNFDR-----NWVAVAAGGVFSLALQADGTIWT 585
Query: 252 WGLGSVGQLGH--CSLQSGDKELLPRRVV-------ALDGIFIKDVACGGVHSCALTSKG 302
WG S+ QLG L + +P ++ A + ++ +A G H +L + G
Sbjct: 586 WGDNSLLQLGTDPAMLTPATQRNVPAQLAVASPPSTAFNSSWVA-IAAGQDHGLSLQADG 644
Query: 303 ALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVV-PNGVQLV--ACGHSHTLV 359
L+AWG + GQLG G T +F+ P+ V+ GV V A G SH+L
Sbjct: 645 TLWAWGANSVGQLGNGVTTATFT-------------PVQVINAEGVPYVSLAAGTSHSLA 691
Query: 360 YMRDGRIHGWGYNSYGQ 376
DG + WG N+ GQ
Sbjct: 692 GRSDGTLWAWGNNTSGQ 708
Score = 284 (105.0 bits), Expect = 2.8e-21, P = 2.8e-21
Identities = 96/317 (30%), Positives = 140/317 (44%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
I A +++ WG N GQ G+ QL K P + G + W+ ++ G +
Sbjct: 95 IKADGSLWAWGSNLFGQLGQPLVNGQLATNKFSPIRI-----GTGNDWVAVSAGELTSFG 149
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKV--KQLQS-EFVKSISCGAHCTAAIAEPR 133
+ DGTL++WG N FG+LGDGT R P +V L + +V + G H A A
Sbjct: 150 LKGDGTLWSWGNNLFGELGDGTTVSRPQPVQVVADPLSNGRYVAVAAGGEHALALQA--- 206
Query: 134 ENDGTISTSRLWVWGQNQGSNFPRLFWGAF---TPNTIICQ-----VSCGSVHVVALSEC 185
DGT LW WG N G TP I +S G +H VAL
Sbjct: 207 --DGT-----LWAWGANLTGQLGTGGTGILPNPTPLKIGTDRDWTAISAGEMHSVALKAD 259
Query: 186 GLLQAWGYNEYGQLGRGITCEG--LQGP-RVIKGYAKFLDEAPELEKITQVSCGEYHSAA 242
G L +WG N +G+LG G+ G + P RV G ++ G H+ A
Sbjct: 260 GSLWSWGQNLFGELGNGVALPGANVTTPTRVGTG-----------SDWVAIAAGALHTVA 308
Query: 243 VSENGEVYTWGLGSVGQLGHCSLQS-GDKELLPRRVVALDGIFIKDVACGGVHSCALTSK 301
+ NG V WG + G +G ++ + L+ V ++ + I A G S ++ +
Sbjct: 309 LHRNGTVSAWGNNAQGAVGDGTVANRSTPTLIVAPVTLVNNVAI---AAGTGVSFSVLAN 365
Query: 302 GALYAWGGSQAGQLGLG 318
G ++ WGG+ AGQLG G
Sbjct: 366 GTVFGWGGNGAGQLGNG 382
Score = 268 (99.4 bits), Expect = 1.7e-19, P = 1.7e-19
Identities = 109/374 (29%), Positives = 150/374 (40%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPA--GANSRWLDIACGHEHT 74
+ A +++ WG N G+ G G LP P G S W+ IA G HT
Sbjct: 256 LKADGSLWSWGQNLFGELGN-G--------VALPGANVTTPTRVGTGSDWVAIAAGALHT 306
Query: 75 AAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRE 134
A+ +GT+ WG N G +GDGT R P + + V +++ A + +
Sbjct: 307 VALHRNGTVSAWGNNAQGAVGDGTVANRSTPTLIVAPVT-LVNNVAIAAGTGVSFS---- 361
Query: 135 NDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQ-------VSCGSVHVVALSECGL 187
++ ++ WG N +GA T T++ V G + L G
Sbjct: 362 ---VLANGTVFGWGGNGAGQLGNGTFGAVTAPTVLSAGASAWLGVEPGGAFSLGLRSNGT 418
Query: 188 LQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENG 247
L AWG N GQLG G T V+ G + A G HS AV +G
Sbjct: 419 LWAWGGNASGQLGDGTTTPSAIPVPVVGGAGNWRTTAT----------GTAHSVAVRADG 468
Query: 248 EVYTWGLGSVGQLGHCS-LQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYA 306
++ WG S GQLG S + + + + A G VA GG HS L + G L++
Sbjct: 469 TLWAWGDNSSGQLGIGSTVAASTPQQITVTNPASAGNDWTAVAGGGAHSLGLKADGTLWS 528
Query: 307 WGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRI 366
WG + GQLG G T S P + T P N V VA G +L DG I
Sbjct: 529 WGDNTFGQLGDGTGT-SNRTTPVQIVT---GNPGNFDRNWVA-VAAGGVFSLALQADGTI 583
Query: 367 HGWGYNSYGQAANE 380
WG NS Q +
Sbjct: 584 WTWGDNSLLQLGTD 597
Score = 255 (94.8 bits), Expect = 4.8e-18, P = 4.8e-18
Identities = 86/278 (30%), Positives = 127/278 (45%)
Query: 55 GCPAGANSRWLDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSE 114
G PA S +A G H + SDGTL+ G+N+FGQLGDGT R P +V
Sbjct: 25 GAPAAGWSAVPHVAAGGNHVLTLRSDGTLWAAGSNQFGQLGDGTGINRTSPVQVPGTW-- 82
Query: 115 FVKSISCGAHCTAAIAEPRENDGTISTSRLWVWGQNQGSNF--P----RLFWGAFTPNTI 168
K+++ G + I + DG+ LW WG N P +L F+P I
Sbjct: 83 --KTVAAGTTHSLGI----KADGS-----LWAWGSNLFGQLGQPLVNGQLATNKFSPIRI 131
Query: 169 -----ICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDE 223
VS G + L G L +WG N +G+LG G T + P+ ++ A L
Sbjct: 132 GTGNDWVAVSAGELTSFGLKGDGTLWSWGNNLFGELGDGTT---VSRPQPVQVVADPLSN 188
Query: 224 APELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGI 283
+ V+ G H+ A+ +G ++ WG GQLG +G +LP G
Sbjct: 189 G----RYVAVAAGGEHALALQADGTLWAWGANLTGQLG-----TGGTGILPNPTPLKIGT 239
Query: 284 FIKD---VACGGVHSCALTSKGALYAWGGSQAGQLGLG 318
+D ++ G +HS AL + G+L++WG + G+LG G
Sbjct: 240 D-RDWTAISAGEMHSVALKADGSLWSWGQNLFGELGNG 276
Score = 172 (65.6 bits), Expect = 5.9e-09, P = 5.9e-09
Identities = 70/249 (28%), Positives = 104/249 (41%)
Query: 140 STSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQL 199
S LW G NQ F +L G T QV G+ VA G + G G L
Sbjct: 49 SDGTLWAAGSNQ---FGQLGDGTGINRTSPVQVP-GTWKTVA---AGTTHSLGIKADGSL 101
Query: 200 GR-GITCEGLQGPRVIKGYAKFLDEAPEL----EKITQVSCGEYHSAAVSENGEVYTWGL 254
G G G ++ G +P VS GE S + +G +++WG
Sbjct: 102 WAWGSNLFGQLGQPLVNGQLATNKFSPIRIGTGNDWVAVSAGELTSFGLKGDGTLWSWGN 161
Query: 255 GSVGQLGHCSLQSGDKELLPRRVVA---LDGIFIKDVACGGVHSCALTSKGALYAWGGSQ 311
G+LG + S + P +VVA +G ++ VA GG H+ AL + G L+AWG +
Sbjct: 162 NLFGELGDGTTVSRPQ---PVQVVADPLSNGRYVA-VAAGGEHALALQADGTLWAWGANL 217
Query: 312 AGQLGLGPQTRSFSLIPNESDTYFRNIPILV-VPNGVQLVACGHSHTLVYMRDGRIHGWG 370
GQLG G ++PN + P+ + ++ G H++ DG + WG
Sbjct: 218 TGQLGTG----GTGILPNPT-------PLKIGTDRDWTAISAGEMHSVALKADGSLWSWG 266
Query: 371 YNSYGQAAN 379
N +G+ N
Sbjct: 267 QNLFGELGN 275
Score = 153 (58.9 bits), Expect = 6.8e-07, P = 6.8e-07
Identities = 65/239 (27%), Positives = 97/239 (40%)
Query: 233 VSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSL--QSGDKELLPRRVVALDGIFIKDVAC 290
V+ G HS + +G ++ WG GQLG + Q + P R+ ++ V+
Sbjct: 85 VAAGTTHSLGIKADGSLWAWGSNLFGQLGQPLVNGQLATNKFSPIRI-GTGNDWVA-VSA 142
Query: 291 GGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQL- 349
G + S L G L++WG + G+LG G + +D P+ NG +
Sbjct: 143 GELTSFGLKGDGTLWSWGNNLFGELGDGTTVSRPQPVQVVAD------PL---SNGRYVA 193
Query: 350 VACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRK---LAAGGG 406
VA G H L DG + WG N GQ + P+P+ +G R ++AG
Sbjct: 194 VAAGGEHALALQADGTLWAWGANLTGQLGTGGTGILPNPTPLK--IGTDRDWTAISAGEM 251
Query: 407 HSAVL-ADAC--SLKELCEFRLAESVTLSNASEIEDVASRTGSEALARLCERLREHSLH 462
HS L AD S + L V L A+ TGS+ +A L +LH
Sbjct: 252 HSVALKADGSLWSWGQNLFGELGNGVALPGANVTTPTRVGTGSDWVAIAAGALHTVALH 310
Score = 148 (57.2 bits), Expect = 2.4e-06, P = 2.4e-06
Identities = 52/184 (28%), Positives = 83/184 (45%)
Query: 233 VSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQS-GDKELLPRRVVALDGIFIKDVACG 291
++ G H+ A+ NG V WG + G +G ++ + L+ V ++ + I A G
Sbjct: 299 IAAGALHTVALHRNGTVSAWGNNAQGAVGDGTVANRSTPTLIVAPVTLVNNVAI---AAG 355
Query: 292 GVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQL-V 350
S ++ + G ++ WGG+ AGQLG G +F + + +L L V
Sbjct: 356 TGVSFSVLANGTVFGWGGNGAGQLGNG----TFGAVTAPT--------VLSAGASAWLGV 403
Query: 351 ACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHS-A 409
G + +L +G + WG N+ GQ + +T + P PV G R A G HS A
Sbjct: 404 EPGGAFSLGLRSNGTLWAWGGNASGQLGDGTTTPSAIPVPVVGGAGNWRTTATGTAHSVA 463
Query: 410 VLAD 413
V AD
Sbjct: 464 VRAD 467
>UNIPROTKB|O95199 [details] [associations]
symbol:RCBTB2 "RCC1 and BTB domain-containing protein 2"
species:9606 "Homo sapiens" [GO:0005087 "Ran guanyl-nucleotide
exchange factor activity" evidence=TAS] InterPro:IPR000210
InterPro:IPR013069 Pfam:PF00651 PROSITE:PS50097 SMART:SM00225
INTERPRO:IPR000408 Pfam:PF00415 EMBL:CH471075 Gene3D:3.30.710.10
InterPro:IPR011333 SUPFAM:SSF54695 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0005087 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 eggNOG:COG5184
HOVERGEN:HBG053261 KO:K11494 EMBL:AF060219 EMBL:AY341245
EMBL:AK315703 EMBL:AL157813 EMBL:BC029052 IPI:IPI00658195
IPI:IPI00941277 PIR:T50663 RefSeq:NP_001259.1 UniGene:Hs.652712
ProteinModelPortal:O95199 SMR:O95199 IntAct:O95199
MINT:MINT-1481780 STRING:O95199 PhosphoSite:O95199 PRIDE:O95199
DNASU:1102 Ensembl:ENST00000344532 GeneID:1102 KEGG:hsa:1102
UCSC:uc001vch.3 CTD:1102 GeneCards:GC13M049063 HGNC:HGNC:1914
HPA:HPA040242 MIM:603524 neXtProt:NX_O95199 PharmGKB:PA26450
InParanoid:O95199 OrthoDB:EOG4M91R6 PhylomeDB:O95199 ChiTaRS:RCBTB2
GenomeRNAi:1102 NextBio:4558 ArrayExpress:O95199 Bgee:O95199
CleanEx:HS_RCBTB2 Genevestigator:O95199 GermOnline:ENSG00000136161
Uniprot:O95199
Length = 551
Score = 305 (112.4 bits), Expect = 1.5e-25, Sum P(2) = 1.5e-25
Identities = 94/308 (30%), Positives = 142/308 (46%)
Query: 68 ACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGA--HC 125
+ G+E +D +F G N G LG G + P ++ L + + +S G+ H
Sbjct: 53 SAGNEVLYTTVND-EIFVLGTNCCGCLGLGDVQSTIEPRRLDSLNGKKIACLSYGSGPHI 111
Query: 126 TAAIAEPREND-GTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSE 184
A E G + S+L N G P N + +V+CGS H + L+
Sbjct: 112 VLATTEGEVFTWGHNAYSQLGNGTTNHGL-VP-CHISTNLSNKQVIEVACGSYHSLVLTS 169
Query: 185 CGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVS 244
G + AWGYN GQ+G G T PR + G + + + ++CG+ AV
Sbjct: 170 DGEVFAWGYNNSGQVGSGSTVNQ-PIPRRVTGCL-------QNKVVVTIACGQMCCMAVV 221
Query: 245 ENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGAL 304
+ GEVY WG GQLG L + + P RV AL GI ++ VACG H+ LT +G +
Sbjct: 222 DTGEVYVWGYNGNGQLG---LGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQV 278
Query: 305 YAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGV-QLVACGHSHT-LVYMR 362
YAWG + GQLG G N+S+ + P+ V + + ++ AC +HT +
Sbjct: 279 YAWGANSYGQLGTG----------NKSNQSYPT-PVTVEKDRIIEIAACHSTHTSAAKTQ 327
Query: 363 DGRIHGWG 370
G ++ WG
Sbjct: 328 GGHVYMWG 335
Score = 257 (95.5 bits), Expect = 1.3e-19, Sum P(2) = 1.3e-19
Identities = 58/165 (35%), Positives = 88/165 (53%)
Query: 228 EKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVA-LDGIFIK 286
+++ +V+CG YHS ++ +GEV+ WG + GQ+G S + + +PRRV L +
Sbjct: 152 KQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVN---QPIPRRVTGCLQNKVVV 208
Query: 287 DVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNG 346
+ACG + A+ G +Y WG + GQLGLG T R + +
Sbjct: 209 TIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGNS--------GNQPTPCRVAALQGIR-- 258
Query: 347 VQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPV 391
VQ VACG++HTLV +G+++ WG NSYGQ + YP+PV
Sbjct: 259 VQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTPV 303
Score = 256 (95.2 bits), Expect = 1.8e-19, Sum P(2) = 1.8e-19
Identities = 71/242 (29%), Positives = 111/242 (45%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ WG+N Q G G +P + L +N + +++ACG H+ + SDG
Sbjct: 120 VFTWGHNAYSQLGN-GTTNHGLVPCHISTNL------SNKQVIEVACGSYHSLVLTSDGE 172
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQ-LQSEFVKSISCGAHCTAAIAEPRENDGTIST 141
+F WG N GQ+G G+ + P +V LQ++ V +I+CG C A+ + T
Sbjct: 173 VFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAV---------VDT 223
Query: 142 SRLWVWGQN--------QGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGY 193
++VWG N N P A + +V+CG H + L++ G + AWG
Sbjct: 224 GEVYVWGYNGNGQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGA 283
Query: 194 NEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVS-CGEYH-SAAVSENGEVYT 251
N YGQLG G P + E ++I +++ C H SAA ++ G VY
Sbjct: 284 NSYGQLGTG-NKSNQSYPTPV---------TVEKDRIIEIAACHSTHTSAAKTQGGHVYM 333
Query: 252 WG 253
WG
Sbjct: 334 WG 335
Score = 253 (94.1 bits), Expect = 4.1e-19, Sum P(2) = 4.1e-19
Identities = 80/267 (29%), Positives = 124/267 (46%)
Query: 73 HTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVK-QLQSEFVKSISCGAHCTAAIAE 131
H ++G +FTWG N + QLG+GT P + L ++ V ++CG++ + +
Sbjct: 110 HIVLATTEGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLT- 168
Query: 132 PRENDGTISTSRLWVWGQNQ----GSN------FPRLFWGAFTPNTIICQVSCGSVHVVA 181
+DG + + WG N GS PR G N ++ ++CG + +A
Sbjct: 169 ---SDGEV-----FAWGYNNSGQVGSGSTVNQPIPRRVTGCLQ-NKVVVTIACGQMCCMA 219
Query: 182 LSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSA 241
+ + G + WGYN GQLG G + G Q P + A L ++ +V+CG H+
Sbjct: 220 VVDTGEVYVWGYNGNGQLGLGNS--GNQ-PTPCRVAA--LQGI----RVQRVACGYAHTL 270
Query: 242 AVSENGEVYTWGLGSVGQLGHCSLQSGDK--ELLPRRVVALDGIFIKDVACGGVH-SCAL 298
+++ G+VY WG S GQLG +G+K + P V I+ AC H S A
Sbjct: 271 VLTDEGQVYAWGANSYGQLG-----TGNKSNQSYPTPVTVEKDRIIEIAACHSTHTSAAK 325
Query: 299 TSKGALYAWGGSQAGQLGLGPQTRSFS 325
T G +Y WG + GQ + P FS
Sbjct: 326 TQGGHVYMWGQCR-GQSVILPHLTHFS 351
Score = 175 (66.7 bits), Expect = 3.5e-10, Sum P(2) = 3.5e-10
Identities = 49/154 (31%), Positives = 72/154 (46%)
Query: 246 NGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVAC----GGVHSCALTSK 301
N E++ G G LG +QS + PRR+ +L+G K +AC G H T++
Sbjct: 64 NDEIFVLGTNCCGCLGLGDVQS---TIEPRRLDSLNG---KKIACLSYGSGPHIVLATTE 117
Query: 302 GALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYM 361
G ++ WG + QLG G T + L+P T N ++ V ACG H+LV
Sbjct: 118 GEVFTWGHNAYSQLGNG--TTNHGLVPCHISTNLSNKQVIEV-------ACGSYHSLVLT 168
Query: 362 RDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCV 395
DG + WGYN+ GQ + + P V C+
Sbjct: 169 SDGEVFAWGYNNSGQVGSGSTVNQPIPRRVTGCL 202
Score = 167 (63.8 bits), Expect = 2.7e-09, Sum P(2) = 2.7e-09
Identities = 44/151 (29%), Positives = 71/151 (47%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+YVWGYN +GQ G G P ++ L G R +ACG+ HT + +G
Sbjct: 226 VYVWGYNGNGQLGL-GNSGNQPTPCRVAA-LQGI------RVQRVACGYAHTLVLTDEGQ 277
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISC-GAHCTAAIAEPRENDGTIST 141
++ WGAN +GQLG G + + +P V + ++ +C H +AA + G
Sbjct: 278 VYAWGANSYGQLGTGNKSNQSYPTPVTVEKDRIIEIAACHSTHTSAA-----KTQG---- 328
Query: 142 SRLWVWGQNQGSN--FPRLFWGAFTPNTIIC 170
+++WGQ +G + P L + T + C
Sbjct: 329 GHVYMWGQCRGQSVILPHLTHFSCTDDVFAC 359
Score = 45 (20.9 bits), Expect = 1.5e-25, Sum P(2) = 1.5e-25
Identities = 10/39 (25%), Positives = 19/39 (48%)
Query: 417 LKELCEFRLAESVTLSNASEIEDVASRTGSEALARLCER 455
LK+LC+ + + + NA + A + ++ L C R
Sbjct: 475 LKKLCQQTIKQGICEENAIALLSAAVKYDAQDLEEFCFR 513
>UNIPROTKB|F1N7C1 [details] [associations]
symbol:HERC6 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] Pfam:PF00632 InterPro:IPR000569 PROSITE:PS50237
SMART:SM00119 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005634
GO:GO:0005737 GO:GO:0016567 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 SUPFAM:SSF56204 GeneTree:ENSGT00660000095216
OMA:HIFAGTY EMBL:DAAA02017014 IPI:IPI00825680 UniGene:Bt.42179
Ensembl:ENSBTAT00000027362 NextBio:20874614 Uniprot:F1N7C1
Length = 1016
Score = 314 (115.6 bits), Expect = 3.5e-25, P = 3.5e-25
Identities = 101/320 (31%), Positives = 152/320 (47%)
Query: 58 AGANSRWLDIACGHEHTAAVASDGTLFTWGANEFGQLG-DGTEEGRKHPEKVKQLQSEFV 116
AG N+ L A G H+ + SDGT+ + G N GQLG GT G + PE++ L++ V
Sbjct: 20 AGGNTL-LQAASGEHHSLLLLSDGTVQSCGDNSRGQLGRKGTPRGEQ-PERIPALETLNV 77
Query: 117 KSISCGA-HCTAAIAEPREND-GTISTSRLWVWGQNQGSNF-PRLFWGAFTPNTIICQVS 173
+SCG H A + R G S +L + G+ + + F P+ I QV+
Sbjct: 78 ALVSCGKEHSLAVCHKGRVFAWGAASEGQLGI-GEFKETTFIPKKI--KTLAGIKIIQVA 134
Query: 174 CGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQV 233
CG H VALSE G + +WG N +GQLG G P+ ++ L+ P + QV
Sbjct: 135 CGHYHSVALSEDGQVFSWGTNSHGQLGLGKEFPSQASPQRVRS----LEGIP----LAQV 186
Query: 234 SCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGV 293
+ G +HS A+S +G + WG S GQL + + P + AL + + ++CG
Sbjct: 187 AAGGHHSFALSLSGTSFGWGSNSAGQLALSGNNAPVQRYKPVSIGALKTLGVVSISCGYK 246
Query: 294 HSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILV--VPNGVQLVA 351
H+ LT G ++ +G + GQLG P T + P LV + V +
Sbjct: 247 HTAVLTQDGKVFTFGDNSYGQLGHDP-------------TAEKRGPQLVERIEGLVSQID 293
Query: 352 CGHSHTLVYM-RDGRIHGWG 370
CG HTL Y+ G++ +G
Sbjct: 294 CGSDHTLAYIYTTGQVVSFG 313
Score = 288 (106.4 bits), Expect = 3.6e-22, P = 3.6e-22
Identities = 78/233 (33%), Positives = 115/233 (49%)
Query: 180 VALSECGLLQAWGYNEYGQL-GRGITCEGLQGPRVIKGYAKFLDEAPELE--KITQVSCG 236
VAL CG + G++ G EG G K + L KI QV+CG
Sbjct: 77 VALVSCGKEHSLAVCHKGRVFAWGAASEGQLGIGEFKETTFIPKKIKTLAGIKIIQVACG 136
Query: 237 EYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSC 296
YHS A+SE+G+V++WG S GQLG + + P+RV +L+GI + VA GG HS
Sbjct: 137 HYHSVALSEDGQVFSWGTNSHGQLGLG--KEFPSQASPQRVRSLEGIPLAQVAAGGHHSF 194
Query: 297 ALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPN-GVQLVACGHS 355
AL+ G + WG + AGQL L N ++ + I + GV ++CG+
Sbjct: 195 ALSLSGTSFGWGSNSAGQLALSGN--------NAPVQRYKPVSIGALKTLGVVSISCGYK 246
Query: 356 HTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHS 408
HT V +DG++ +G NSYGQ ++ + P V+ G V ++ G H+
Sbjct: 247 HTAVLTQDGKVFTFGDNSYGQLGHDPTAEKRGPQLVERIEGLVSQIDCGSDHT 299
Score = 250 (93.1 bits), Expect = 6.7e-18, P = 6.7e-18
Identities = 78/289 (26%), Positives = 134/289 (46%)
Query: 20 KSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVAS 79
K ++ WG GQ G + IPK++ L G + + +ACGH H+ A++
Sbjct: 93 KGRVFAWGAASEGQLGIGEFKETTFIPKKIKT-LAGI------KIIQVACGHYHSVALSE 145
Query: 80 DGTLFTWGANEFGQLGDGTE-EGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGT 138
DG +F+WG N GQLG G E + P++V+ L+ + ++ G H + A++ + G
Sbjct: 146 DGQVFSWGTNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGHHSFALSLSGTSFGW 205
Query: 139 ISTS--RLWVWGQNQG-SNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNE 195
S S +L + G N + + GA ++ +SCG H L++ G + +G N
Sbjct: 206 GSNSAGQLALSGNNAPVQRYKPVSIGALKTLGVV-SISCGYKHTAVLTQDGKVFTFGDNS 264
Query: 196 YGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAA-VSENGEVYTWGL 254
YGQLG T E +GP++++ ++Q+ CG H+ A + G+V ++G
Sbjct: 265 YGQLGHDPTAEK-RGPQLVERIEGL---------VSQIDCGSDHTLAYIYTTGQVVSFGR 314
Query: 255 GS--VGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSK 301
G + H +S D L D + +K + G + TS+
Sbjct: 315 GPGCASRSPHPGAESSDISCLVSAKDLAD-VQVKHIFAGTYANFVTTSQ 362
Score = 249 (92.7 bits), Expect = 8.6e-18, P = 8.6e-18
Identities = 65/185 (35%), Positives = 98/185 (52%)
Query: 230 ITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVA 289
+ Q + GE+HS + +G V + G S GQLG G++ P R+ AL+ + + V+
Sbjct: 25 LLQAASGEHHSLLLLSDGTVQSCGDNSRGQLGRKGTPRGEQ---PERIPALETLNVALVS 81
Query: 290 CGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQL 349
CG HS A+ KG ++AWG + GQLG+G + + + IP + T I I +Q
Sbjct: 82 CGKEHSLAVCHKGRVFAWGAASEGQLGIG-EFKETTFIPKKIKT-LAGIKI------IQ- 132
Query: 350 VACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWY-PSPVDWCVG-EVRKLAAGGGH 407
VACGH H++ DG++ WG NS+GQ K + P V G + ++AAGG H
Sbjct: 133 VACGHYHSVALSEDGQVFSWGTNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGHH 192
Query: 408 SAVLA 412
S L+
Sbjct: 193 SFALS 197
Score = 248 (92.4 bits), Expect = 1.1e-17, P = 1.1e-17
Identities = 79/246 (32%), Positives = 114/246 (46%)
Query: 27 GYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGTLFTW 86
G N GQ GRKG P+ PE PA ++CG EH+ AV G +F W
Sbjct: 48 GDNSRGQLGRKGT------PRGEQPERI--PALETLNVALVSCGKEHSLAVCHKGRVFAW 99
Query: 87 GANEFGQLGDGT-EEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTSRLW 145
GA GQLG G +E P+K+K L + ++CG + + A++E DG + +
Sbjct: 100 GAASEGQLGIGEFKETTFIPKKIKTLAGIKIIQVACGHYHSVALSE----DGQVFS---- 151
Query: 146 VWGQNQ-GS-NFPRLFWGAFTPNTI-------ICQVSCGSVHVVALSECGLLQAWGYNEY 196
WG N G + F +P + + QV+ G H ALS G WG N
Sbjct: 152 -WGTNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGHHSFALSLSGTSFGWGSNSA 210
Query: 197 GQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGS 256
GQL G P ++ Y A + + +SCG H+A ++++G+V+T+G S
Sbjct: 211 GQLA----LSGNNAP--VQRYKPVSIGALKTLGVVSISCGYKHTAVLTQDGKVFTFGDNS 264
Query: 257 VGQLGH 262
GQLGH
Sbjct: 265 YGQLGH 270
Score = 133 (51.9 bits), Expect = 4.4e-05, P = 4.4e-05
Identities = 45/150 (30%), Positives = 63/150 (42%)
Query: 266 QSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFS 325
++G + L R V G + A G HS L S G + + G + GQLG R
Sbjct: 6 RAGGRRPLRERQVCAGGNTLLQAASGEHHSLLLLSDGTVQSCGDNSRGQLGRKGTPRGEQ 65
Query: 326 LIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAA-NEKSTY 384
P IP L N V LV+CG H+L GR+ WG S GQ E
Sbjct: 66 --PER-------IPALETLN-VALVSCGKEHSLAVCHKGRVFAWGAASEGQLGIGEFKET 115
Query: 385 AWYPSPVDWCVG-EVRKLAAGGGHSAVLAD 413
+ P + G ++ ++A G HS L++
Sbjct: 116 TFIPKKIKTLAGIKIIQVACGHYHSVALSE 145
>RGD|1306366 [details] [associations]
symbol:Herc1 "HECT and RLD domain containing E3 ubiquitin
protein ligase family member 1" species:10116 "Rattus norvegicus"
[GO:0010507 "negative regulation of autophagy" evidence=ISO]
[GO:0021702 "cerebellar Purkinje cell differentiation"
evidence=ISO] [GO:0031175 "neuron projection development"
evidence=ISO] [GO:0050885 "neuromuscular process controlling
balance" evidence=ISO] RGD:1306366 INTERPRO:IPR000408 Pfam:PF00415
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 OrthoDB:EOG40GCPW
GeneTree:ENSGT00700000104312 IPI:IPI00765979
Ensembl:ENSRNOT00000049300 UCSC:RGD:1306366 Uniprot:D3Z9N9
Length = 1203
Score = 311 (114.5 bits), Expect = 1.1e-24, P = 1.1e-24
Identities = 106/372 (28%), Positives = 171/372 (45%)
Query: 47 KQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPE 106
K L P+L P+ ++++ ++ G T +++DG++ G +G+LG G + +
Sbjct: 392 KILQPKL--APSFSDAQTIE--AGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLK 447
Query: 107 KVKQLQSEFVKSISCG----AHCTAAIAEPREND-GTISTSRLWVWGQNQGSNFPRLFWG 161
K+ +K +S H A E G +L G + +P+L G
Sbjct: 448 KLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLG-HGNSSTQKYPKLIQG 506
Query: 162 AFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFL 221
++C VS G H A++E G L WG ++G+LG G + P ++K
Sbjct: 507 PLQGKVVVC-VSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDS-NSRNIPTLVK------ 558
Query: 222 DEAPELEKITQVSCGEYHSAAVSENGE-VYTWGLGSVGQLGHCSLQSGDKELL--PRRVV 278
++ + +VSCG H+ A+S++G V+++G G G+LGH GD + P+ +
Sbjct: 559 ----DISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGH-----GDTNRVYKPKVIE 609
Query: 279 ALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNI 338
AL G+FI+ V G S ALTS G +YAWG LG G + + +L P + I
Sbjct: 610 ALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGAC--LGCG-SSEATALRP-------KLI 659
Query: 339 PILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYA-WYPSPVDWCVG- 396
L V ++ G SH L D ++ WG NS GQ ST P V G
Sbjct: 660 EELAATRIVD-ISIGDSHCLSLSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGI 718
Query: 397 EVRKLAAGGGHS 408
+++++AG HS
Sbjct: 719 AIQQISAGTSHS 730
Score = 265 (98.3 bits), Expect = 1.8e-19, P = 1.8e-19
Identities = 88/289 (30%), Positives = 132/289 (45%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ WG G+ G G + PK + L G + ++ G+ H+AAV DG
Sbjct: 479 VFSWGDGDYGKLGH-GNSSTQKYPKLIQGPLQGKVV------VCVSAGYRHSAAVTEDGE 531
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
L+TWG +FG+LG G R P VK + + V +SCG+ T A+++ DG
Sbjct: 532 LYTWGEGDFGRLGHGDSNSRNIPTLVKDISN--VGEVSCGSSHTIALSK----DGRT--- 582
Query: 143 RLWVWGQNQGSNFPRLFWG----AFTPNTI-------ICQVSCGSVHVVALSECGLLQAW 191
VW G N +L G + P I I +V GS +AL+ G + AW
Sbjct: 583 ---VWSFGGGDN-GKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAW 638
Query: 192 GYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYT 251
G LG G + P++I+ A +I +S G+ H ++S + EVY
Sbjct: 639 GCGAC--LGCGSSEATALRPKLIEELAA--------TRIVDISIGDSHCLSLSHDNEVYA 688
Query: 252 WGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTS 300
WG S+GQ G + S P++V LDGI I+ ++ G HS A T+
Sbjct: 689 WGNNSMGQCGQGN--STGPITKPKKVSGLDGIAIQQISAGTSHSLAWTA 735
Score = 262 (97.3 bits), Expect = 3.9e-19, P = 3.9e-19
Identities = 81/253 (32%), Positives = 126/253 (49%)
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTI--- 139
++ WG+N QL +GT+E P+ ++I G +CT I+ DG++
Sbjct: 374 VYVWGSNSSHQLVEGTQEKILQPKLAPSFSD--AQTIEAGQYCTFVIS----TDGSVRAC 427
Query: 140 ---STSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSC--GSV-HVVALSECGLLQAWGY 193
S RL + N S +L F P+ I +VS GS H +A + G + +WG
Sbjct: 428 GKGSYGRLGLGDSNNQSTLKKL---TFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGD 484
Query: 194 NEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQ-VSCGEYHSAAVSENGEVYTW 252
+YG+LG G + P++I+G P K+ VS G HSAAV+E+GE+YTW
Sbjct: 485 GDYGKLGHG-NSSTQKYPKLIQG--------PLQGKVVVCVSAGYRHSAAVTEDGELYTW 535
Query: 253 GLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKG-ALYAWGGSQ 311
G G G+LGH S + +P V + + +V+CG H+ AL+ G ++++GG
Sbjct: 536 GEGDFGRLGHGDSNSRN---IPTLVKDISNV--GEVSCGSSHTIALSKDGRTVWSFGGGD 590
Query: 312 AGQLGLGPQTRSF 324
G+LG G R +
Sbjct: 591 NGKLGHGDTNRVY 603
Score = 235 (87.8 bits), Expect = 3.9e-16, P = 3.9e-16
Identities = 78/281 (27%), Positives = 123/281 (43%)
Query: 141 TSRLWVWGQNQGSNF-----PRLFWGAFTPNTIICQ-VSCGSVHVVALSECGLLQAWGYN 194
T ++VWG N ++ P+ Q + G +S G ++A G
Sbjct: 371 TCEVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQTIEAGQYCTFVISTDGSVRACGKG 430
Query: 195 EYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGL 254
YG+LG G + +K + ++K++ + H+ A + GEV++WG
Sbjct: 431 SYGRLGLGDS----NNQSTLKKLT--FEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGD 484
Query: 255 GSVGQLGHCSLQSGDKELLPRRVVA-LDGIFIKDVACGGVHSCALTSKGALYAWGGSQAG 313
G G+LGH + S K P+ + L G + V+ G HS A+T G LY WG G
Sbjct: 485 GDYGKLGHGN-SSTQK--YPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFG 541
Query: 314 QLGLGPQTRSFSLIPNESDTYFRNIPILVVP-NGVQLVACGHSHTLVYMRDGR-IHGWGY 371
+LG G D+ RNIP LV + V V+CG SHT+ +DGR + +G
Sbjct: 542 RLGHG-------------DSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGG 588
Query: 372 NSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVL 411
G+ + + + P ++ G +RK+ AG S L
Sbjct: 589 GDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLAL 629
Score = 148 (57.2 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 49/185 (26%), Positives = 82/185 (44%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+YVWG N S Q +E K L P+L P+ ++++ ++ G T +++DG+
Sbjct: 374 VYVWGSNSSHQLVEGTQE------KILQPKL--APSFSDAQTIE--AGQYCTFVISTDGS 423
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCG----AHCTAAIAEPREND-G 137
+ G +G+LG G + +K+ +K +S H A E G
Sbjct: 424 VRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWG 483
Query: 138 TISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYG 197
+L G + +P+L G ++C VS G H A++E G L WG ++G
Sbjct: 484 DGDYGKLG-HGNSSTQKYPKLIQGPLQGKVVVC-VSAGYRHSAAVTEDGELYTWGEGDFG 541
Query: 198 QLGRG 202
+LG G
Sbjct: 542 RLGHG 546
Score = 122 (48.0 bits), Expect = 0.00084, P = 0.00084
Identities = 46/173 (26%), Positives = 76/173 (43%)
Query: 243 VSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKG 302
VSE EVY WG S QL Q +K L P+ + + + G + +++ G
Sbjct: 368 VSETCEVYVWGSNSSHQLVE-GTQ--EKILQPKLAPSFSDA--QTIEAGQYCTFVISTDG 422
Query: 303 ALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMR 362
++ A G G+LGLG +L + + R+I + G HTL +
Sbjct: 423 SVRACGKGSYGRLGLGDSNNQSTLKKLTFEPH-RSIKKVSSSKG------SDGHTLAFTT 475
Query: 363 DGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCV-GEVRK-LAAGGGHSAVLAD 413
+G + WG YG+ + S+ YP + + G+V ++AG HSA + +
Sbjct: 476 EGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528
>ZFIN|ZDB-GENE-081015-2 [details] [associations]
symbol:rpgrb "retinitis pigmentosa GTPase regulator
b" species:7955 "Danio rerio" [GO:0060287 "epithelial cilium
movement involved in determination of left/right asymmetry"
evidence=IMP] [GO:0060271 "cilium morphogenesis" evidence=IMP]
[GO:0010842 "retina layer formation" evidence=IMP] [GO:0060041
"retina development in camera-type eye" evidence=IMP] [GO:0007018
"microtubule-based movement" evidence=IMP] INTERPRO:IPR000408
Pfam:PF00415 ZFIN:ZDB-GENE-081015-2 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0010842 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 GO:GO:0060271 GO:GO:0060287
GeneTree:ENSGT00700000104160 EMBL:CR450831 IPI:IPI00798788
RefSeq:XP_685964.5 UniGene:Dr.100975 Ensembl:ENSDART00000088624
GeneID:557752 KEGG:dre:557752 CTD:557752 NextBio:20882140
Bgee:F1QM29 Uniprot:F1QM29
Length = 1413
Score = 309 (113.8 bits), Expect = 1.2e-24, Sum P(2) = 1.2e-24
Identities = 106/309 (34%), Positives = 152/309 (49%)
Query: 65 LDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAH 124
L I+CG EHTA V +G LF +G+N +GQLG GT+ P VK L+SE VK +CG
Sbjct: 39 LRISCGDEHTALVTENGKLFMFGSNNWGQLGLGTKTTVNKPTCVKALKSERVKLTACGRT 98
Query: 125 CTAAIAEPREN---DGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVA 181
T R N G + +L + N ++F + + F I ++ GS A
Sbjct: 99 HTLVFTS-RGNLYACGGNNEGQLGLGDCNDRTSFHLVEF--FNKQGPIKMLAAGSNTSAA 155
Query: 182 LSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSA 241
L++ G L WG N GQ+G G L V G +++ VSCG YHSA
Sbjct: 156 LTQDGRLYMWGDNSEGQIGLGKESNALTPQEVSVG-----------KRVFWVSCGYYHSA 204
Query: 242 AVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSK 301
V+ +G +YT+G G+LG S + +P++V + ++ VACGG H+ ALT +
Sbjct: 205 FVTVDGALYTFGEKDSGKLG-LSTEKLANHKVPQQVTDIPDRVVQ-VACGGGHTVALT-E 261
Query: 302 GALYAWGGSQAGQLGLGPQTRSF-SLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVY 360
+Y++G Q GQLG G T F S +P + +FR + G A + L+Y
Sbjct: 262 NEVYSFGLGQFGQLGHG--TFIFESRLPRVVE-HFRKGRVKHAACGENHTALITDNGLLY 318
Query: 361 -MRDGRIHG 368
DGR HG
Sbjct: 319 TFGDGR-HG 326
Score = 292 (107.8 bits), Expect = 1.4e-22, Sum P(2) = 1.4e-22
Identities = 90/282 (31%), Positives = 139/282 (49%)
Query: 68 ACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEF-VKSISCGAHCT 126
ACG HT S G L+ G N GQLG G R V+ + +K ++ G++ +
Sbjct: 94 ACGRTHTLVFTSRGNLYACGGNNEGQLGLGDCNDRTSFHLVEFFNKQGPIKMLAAGSNTS 153
Query: 127 AAIAEPRENDGTISTSRLWVWGQN-QGSNFPRLFWGAFTPNTI-----ICQVSCGSVHVV 180
AA+ + DG RL++WG N +G A TP + + VSCG H
Sbjct: 154 AALTQ----DG-----RLYMWGDNSEGQIGLGKESNALTPQEVSVGKRVFWVSCGYYHSA 204
Query: 181 ALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHS 240
++ G L +G + G+LG ++ E L +V + + + P+ ++ QV+CG H+
Sbjct: 205 FVTVDGALYTFGEKDSGKLG--LSTEKLANHKV----PQQVTDIPD--RVVQVACGGGHT 256
Query: 241 AAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTS 300
A++EN EVY++GLG GQLGH + + LPR V +K ACG H+ +T
Sbjct: 257 VALTEN-EVYSFGLGQFGQLGHGTFIFESR--LPRVVEHFRKGRVKHAACGENHTALITD 313
Query: 301 KGALYAWGGSQAGQLGLGPQ--TRSF--SLIPNESDTYFRNI 338
G LY +G + G+LGLG + T F +L P D + ++
Sbjct: 314 NGLLYTFGDGRHGKLGLGEENFTNQFKPTLCPRFLDYHVHSV 355
Score = 236 (88.1 bits), Expect = 4.2e-16, Sum P(2) = 4.2e-16
Identities = 72/202 (35%), Positives = 107/202 (52%)
Query: 216 GYAKFLDEAPE---LEKIT--QVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDK 270
G +KF D AP L+ ++SCG+ H+A V+ENG+++ +G + GQLG + + +K
Sbjct: 19 GKSKFADNAPSKFWLKNDVPLRISCGDEHTALVTENGKLFMFGSNNWGQLGLGTKTTVNK 78
Query: 271 ELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGP--QTRSFSLIP 328
P V AL +K ACG H+ TS+G LYA GG+ GQLGLG SF L+
Sbjct: 79 ---PTCVKALKSERVKLTACGRTHTLVFTSRGNLYACGGNNEGQLGLGDCNDRTSFHLV- 134
Query: 329 NESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYP 388
+ + + PI +++A G + + +DGR++ WG NS GQ K + A P
Sbjct: 135 ---EFFNKQGPI-------KMLAAGSNTSAALTQDGRLYMWGDNSEGQIGLGKESNALTP 184
Query: 389 SPVDWCVGE-VRKLAAGGGHSA 409
V VG+ V ++ G HSA
Sbjct: 185 QEVS--VGKRVFWVSCGYYHSA 204
Score = 208 (78.3 bits), Expect = 5.5e-13, Sum P(2) = 5.5e-13
Identities = 76/277 (27%), Positives = 125/277 (45%)
Query: 143 RLWVWGQNQGSNFPRLFWGAFTP-NTIICQVSCGSVHVVALSECGLLQAWGYNEYGQL-G 200
+L+++G N N+ +L G T N C + S V L+ CG + G L
Sbjct: 56 KLFMFGSN---NWGQLGLGTKTTVNKPTCVKALKSERV-KLTACGRTHTLVFTSRGNLYA 111
Query: 201 RGITCEGLQGPRVIKGYAKF--LDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVG 258
G EG G F ++ + I ++ G SAA++++G +Y WG S G
Sbjct: 112 CGGNNEGQLGLGDCNDRTSFHLVEFFNKQGPIKMLAAGSNTSAALTQDGRLYMWGDNSEG 171
Query: 259 QLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLG 318
Q+G L L P+ V +F V+CG HS +T GALY +G +G+LGL
Sbjct: 172 QIG---LGKESNALTPQEVSVGKRVFW--VSCGYYHSAFVTVDGALYTFGEKDSGKLGLS 226
Query: 319 PQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAA 378
+ + +P + + +P+ V VACG HT V + + ++ +G +GQ
Sbjct: 227 TEKLANHKVPQQ---------VTDIPDRVVQVACGGGHT-VALTENEVYSFGLGQFGQLG 276
Query: 379 NEKSTY-AWYPSPVD-WCVGEVRKLAAGGGHSAVLAD 413
+ + + P V+ + G V+ A G H+A++ D
Sbjct: 277 HGTFIFESRLPRVVEHFRKGRVKHAACGENHTALITD 313
Score = 195 (73.7 bits), Expect = 1.5e-11, Sum P(2) = 1.5e-11
Identities = 62/201 (30%), Positives = 96/201 (47%)
Query: 134 ENDGTISTS-RLWVWGQNQ-GSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAW 191
E + I S ++ +G+++ N P FW N + ++SCG H ++E G L +
Sbjct: 4 ETEDEIPESGAVFTFGKSKFADNAPSKFW---LKNDVPLRISCGDEHTALVTENGKLFMF 60
Query: 192 GYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYT 251
G N +GQLG G T + P +K A + E++ +CG H+ + G +Y
Sbjct: 61 GSNNWGQLGLG-TKTTVNKPTCVK--------ALKSERVKLTACGRTHTLVFTSRGNLYA 111
Query: 252 WGLGSVGQLG--HCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGG 309
G + GQLG C+ ++ L+ G IK +A G S ALT G LY WG
Sbjct: 112 CGGNNEGQLGLGDCNDRTSF-HLV--EFFNKQGP-IKMLAAGSNTSAALTQDGRLYMWGD 167
Query: 310 SQAGQLGLGPQTRSFSLIPNE 330
+ GQ+GLG ++ + L P E
Sbjct: 168 NSEGQIGLGKESNA--LTPQE 186
Score = 194 (73.4 bits), Expect = 1.9e-11, Sum P(2) = 1.9e-11
Identities = 73/259 (28%), Positives = 114/259 (44%)
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND 136
+ G +FT+G ++F D P K L+++ ISCG TA + E +
Sbjct: 9 IPESGAVFTFGKSKFA---DNA------PSKF-WLKNDVPLRISCGDEHTALVTE----N 54
Query: 137 GTISTSRLWVWGQ-NQGS----NFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAW 191
G + WGQ G+ N P + + +CG H + + G L A
Sbjct: 55 GKLFMFGSNNWGQLGLGTKTTVNKPTCVKALKSERVKL--TACGRTHTLVFTSRGNLYAC 112
Query: 192 GYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYT 251
G N GQLG G C +++ + K + P I ++ G SAA++++G +Y
Sbjct: 113 GGNNEGQLGLG-DCNDRTSFHLVEFFNK---QGP----IKMLAAGSNTSAALTQDGRLYM 164
Query: 252 WGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQ 311
WG S GQ+G L L P+ V +F V+CG HS +T GALY +G
Sbjct: 165 WGDNSEGQIG---LGKESNALTPQEVSVGKRVFW--VSCGYYHSAFVTVDGALYTFGEKD 219
Query: 312 AGQLGLGPQTRSFSLIPNE 330
+G+LGL + + +P +
Sbjct: 220 SGKLGLSTEKLANHKVPQQ 238
Score = 189 (71.6 bits), Expect = 6.7e-11, Sum P(2) = 6.7e-11
Identities = 61/189 (32%), Positives = 97/189 (51%)
Query: 228 EKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKD 287
+++ VSCG YHSA V+ +G +YT+G G+LG S + +P++V + ++
Sbjct: 191 KRVFWVSCGYYHSAFVTVDGALYTFGEKDSGKLG-LSTEKLANHKVPQQVTDIPDRVVQ- 248
Query: 288 VACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSF-SLIPNESDTYFRNIPILVVPNG 346
VACGG H+ ALT + +Y++G Q GQLG G T F S +P + +FR
Sbjct: 249 VACGGGHTVALT-ENEVYSFGLGQFGQLGHG--TFIFESRLPRVVE-HFRK-------GR 297
Query: 347 VQLVACGHSHTLVYMRDGRIHGWGYNSYGQAA--NEKSTYAWYPSPVDWCVG-EVRKLAA 403
V+ ACG +HT + +G ++ +G +G+ E T + P+ + V +
Sbjct: 298 VKHAACGENHTALITDNGLLYTFGDGRHGKLGLGEENFTNQFKPTLCPRFLDYHVHSVTC 357
Query: 404 GGGHSAVLA 412
GG H VLA
Sbjct: 358 GGCHMLVLA 366
Score = 181 (68.8 bits), Expect = 5.0e-10, Sum P(2) = 5.0e-10
Identities = 56/188 (29%), Positives = 91/188 (48%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+Y+WG N GQ G G+E P+++ G W ++CG+ H+A V DG
Sbjct: 162 LYMWGDNSEGQIGL-GKESNALTPQEVS-------VGKRVFW--VSCGYYHSAFVTVDGA 211
Query: 83 LFTWGANEFGQLGDGTEEGRKH--PEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIS 140
L+T+G + G+LG TE+ H P++V + V+ ++CG T A+ E N+ +
Sbjct: 212 LYTFGEKDSGKLGLSTEKLANHKVPQQVTDIPDRVVQ-VACGGGHTVALTE---NE--VY 265
Query: 141 TSRLWVWGQ-NQG-----SNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYN 194
+ L +GQ G S PR+ F + +CG H +++ GLL +G
Sbjct: 266 SFGLGQFGQLGHGTFIFESRLPRVV-EHFRKGRVK-HAACGENHTALITDNGLLYTFGDG 323
Query: 195 EYGQLGRG 202
+G+LG G
Sbjct: 324 RHGKLGLG 331
Score = 134 (52.2 bits), Expect = 6.0e-05, Sum P(2) = 6.0e-05
Identities = 48/173 (27%), Positives = 79/173 (45%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
+ A+Y +G SG+ G +L K +P ++ P R + +ACG HT A
Sbjct: 206 VTVDGALYTFGEKDSGKLGLS--TEKLANHK-VPQQVTDIP----DRVVQVACGGGHTVA 258
Query: 77 VASDGTLFTWGANEFGQLGDGTE--EGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRE 134
+ ++ ++++G +FGQLG GT E R P V+ + VK +CG + TA I +
Sbjct: 259 L-TENEVYSFGLGQFGQLGHGTFIFESRL-PRVVEHFRKGRVKHAACGENHTALITD-NG 315
Query: 135 NDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTI---ICQVSCGSVHVVALSE 184
T R G + NF F P + + V+CG H++ L++
Sbjct: 316 LLYTFGDGRHGKLGLGE-ENFTNQFKPTLCPRFLDYHVHSVTCGGCHMLVLAK 367
Score = 129 (50.5 bits), Expect = 0.00021, Sum P(2) = 0.00021
Identities = 39/130 (30%), Positives = 64/130 (49%)
Query: 288 VACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGV 347
++CG H+ +T G L+ +G + GQLGLG +T T + + V
Sbjct: 41 ISCGDEHTALVTENGKLFMFGSNNWGQLGLGTKTTV------NKPTCVKALK----SERV 90
Query: 348 QLVACGHSHTLVYMRDGRIHGWGYNSYGQAA----NEKSTYAWYPSPVDWC--VGEVRKL 401
+L ACG +HTLV+ G ++ G N+ GQ N+++++ V++ G ++ L
Sbjct: 91 KLTACGRTHTLVFTSRGNLYACGGNNEGQLGLGDCNDRTSFHL----VEFFNKQGPIKML 146
Query: 402 AAGGGHSAVL 411
AAG SA L
Sbjct: 147 AAGSNTSAAL 156
Score = 48 (22.0 bits), Expect = 1.2e-24, Sum P(2) = 1.2e-24
Identities = 12/45 (26%), Positives = 22/45 (48%)
Query: 432 SNASEIEDVASRTGSEALARLCERLREHSLHGDEFDCDDDTRNGN 476
SN SE+ D ++ SE + E S + D +++ +NG+
Sbjct: 1026 SNDSEVNDTMTKHSSEDEEKEKEEKSSDSSNASSEDEEEEEKNGD 1070
>TAIR|locus:2009739 [details] [associations]
symbol:AT1G65920 species:3702 "Arabidopsis thaliana"
[GO:0005543 "phospholipid binding" evidence=IEA] [GO:0005794 "Golgi
apparatus" evidence=ISM] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0005773 "vacuole" evidence=IDA] [GO:0005886
"plasma membrane" evidence=IDA] InterPro:IPR000306
InterPro:IPR001849 Pfam:PF01363 SMART:SM00064 SMART:SM00233
INTERPRO:IPR000408 Pfam:PF00415 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005886 GO:GO:0005773 GO:GO:0005543
Gene3D:2.30.29.30 InterPro:IPR011993 GO:GO:0046872 EMBL:AC009513
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
Gene3D:3.30.40.10 InterPro:IPR017455 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 PROSITE:PS50178 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 eggNOG:COG5184 InterPro:IPR013591
Pfam:PF08381 PROSITE:PS51514 HSSP:Q15075 HOGENOM:HOG000240974
IPI:IPI00526779 PIR:E96683 RefSeq:NP_176767.1 UniGene:At.35824
ProteinModelPortal:Q9SRZ7 SMR:Q9SRZ7 PaxDb:Q9SRZ7 PRIDE:Q9SRZ7
EnsemblPlants:AT1G65920.1 GeneID:842904 KEGG:ath:AT1G65920
TAIR:At1g65920 InParanoid:Q9SRZ7 OMA:AQADSWF PhylomeDB:Q9SRZ7
ProtClustDB:CLSN2679687 Genevestigator:Q9SRZ7 Uniprot:Q9SRZ7
Length = 1006
Score = 309 (113.8 bits), Expect = 1.4e-24, P = 1.4e-24
Identities = 96/330 (29%), Positives = 150/330 (45%)
Query: 67 IACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCT 126
I+ G +H A V G +F WG G+LG HP++V+ L+ V+S++C H T
Sbjct: 297 ISLGAKHAALVTRQGEVFCWGNGNSGKLGLKVNIDIDHPKRVESLEDVAVRSVACSDHQT 356
Query: 127 AAIAEPRENDGTISTSRLWVWG------QNQGSNF-PRLFWGAFTPNTIICQVSCGSVHV 179
A+ E E L++WG + GS F R + + V+CG+ H
Sbjct: 357 CAVTESGE---------LYLWGIDGGTIEQSGSQFLTRKISDVLGGSLTVLSVACGAWHT 407
Query: 180 VALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYH 239
++ G L +G +G LG G + E + P+ ++ + K+ VSCG +H
Sbjct: 408 AIVTSSGQLFTYGSGTFGVLGHG-SLESVTKPKEVESLRRM--------KVISVSCGPWH 458
Query: 240 SAAVSEN------------GEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVAL-DGIFIK 286
+AA+ E G+++TWG G G+LGH + ++L+P V L D FIK
Sbjct: 459 TAAIVETANDRKFYNAKSCGKLFTWGDGDKGRLGHADSK---RKLVPTCVTELIDHDFIK 515
Query: 287 DVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNG 346
V+CG + AL+ G +Y G S GQLG P+ + S+ + N+ V +
Sbjct: 516 -VSCGWTLTVALSISGTVYTMGSSIHGQLGC-PRAKDKSV-----NVVLGNLTRQFVKD- 567
Query: 347 VQLVACGHSHTLVYMRDGRIHGWGYNSYGQ 376
+A G H V G ++ WG GQ
Sbjct: 568 ---IASGSHHVAVLTSFGNVYTWGKGMNGQ 594
Score = 251 (93.4 bits), Expect = 5.1e-18, P = 5.1e-18
Identities = 88/282 (31%), Positives = 131/282 (46%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+Y+WG + G + G + + +++ L G + L +ACG HTA V S G
Sbjct: 365 LYLWGID-GGTIEQSGSQF---LTRKISDVL-----GGSLTVLSVACGAWHTAIVTSSGQ 415
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTI--- 139
LFT+G+ FG LG G+ E P++V+ L+ V S+SCG TAAI E ND
Sbjct: 416 LFTYGSGTFGVLGHGSLESVTKPKEVESLRRMKVISVSCGPWHTAAIVETA-NDRKFYNA 474
Query: 140 -STSRLWVWGQ-NQG----SNFPRLFWGAFTPNTI---ICQVSCGSVHVVALSECGLLQA 190
S +L+ WG ++G ++ R I +VSCG VALS G +
Sbjct: 475 KSCGKLFTWGDGDKGRLGHADSKRKLVPTCVTELIDHDFIKVSCGWTLTVALSISGTVYT 534
Query: 191 WGYNEYGQLGRGITCEGLQGPRVI-KGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEV 249
G + +GQLG C PR K L + + ++ G +H A ++ G V
Sbjct: 535 MGSSIHGQLG----C-----PRAKDKSVNVVLGNLTR-QFVKDIASGSHHVAVLTSFGNV 584
Query: 250 YTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACG 291
YTWG G GQLG ++ + +L V L ++ +ACG
Sbjct: 585 YTWGKGMNGQLGLGDVRDRNSPVL---VEPLGDRLVESIACG 623
Score = 213 (80.0 bits), Expect = 8.0e-14, P = 8.0e-14
Identities = 92/319 (28%), Positives = 134/319 (42%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
+ + ++ WG +SG+ G K + PK++ E A + +AC T A
Sbjct: 307 VTRQGEVFCWGNGNSGKLGLKVNI-DIDHPKRV--ESLEDVAVRS-----VACSDHQTCA 358
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKH-PEKVKQLQ--SEFVKSISCGAHCTAAIAEPR 133
V G L+ WG + G G + G + K+ + S V S++CGA TA +
Sbjct: 359 VTESGELYLWGID--G--GTIEQSGSQFLTRKISDVLGGSLTVLSVACGAWHTAIVTSSG 414
Query: 134 ENDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSE--------- 184
+ T + V G + + + VSCG H A+ E
Sbjct: 415 QLF-TYGSGTFGVLGHGSLESVTKPKEVESLRRMKVISVSCGPWHTAAIVETANDRKFYN 473
Query: 185 ---CGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSA 241
CG L WG + G+LG + L P + + +D +VSCG +
Sbjct: 474 AKSCGKLFTWGDGDKGRLGHADSKRKLV-PTCV---TELIDH-----DFIKVSCGWTLTV 524
Query: 242 AVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVA--LDGIFIKDVACGGVHSCALT 299
A+S +G VYT G GQLG C ++ DK + VV L F+KD+A G H LT
Sbjct: 525 ALSISGTVYTMGSSIHGQLG-CP-RAKDKSV---NVVLGNLTRQFVKDIASGSHHVAVLT 579
Query: 300 SKGALYAWGGSQAGQLGLG 318
S G +Y WG GQLGLG
Sbjct: 580 SFGNVYTWGKGMNGQLGLG 598
Score = 204 (76.9 bits), Expect = 7.8e-13, P = 7.8e-13
Identities = 95/303 (31%), Positives = 132/303 (43%)
Query: 67 IACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKH-PEKVKQLQ--SEFVKSISCGA 123
+AC T AV G L+ WG + G G + G + K+ + S V S++CGA
Sbjct: 349 VACSDHQTCAVTESGELYLWGID--G--GTIEQSGSQFLTRKISDVLGGSLTVLSVACGA 404
Query: 124 HCTAAIAEPRENDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALS 183
TA + + T + V G + + + VSCG H A+
Sbjct: 405 WHTAIVTSSGQLF-TYGSGTFGVLGHGSLESVTKPKEVESLRRMKVISVSCGPWHTAAIV 463
Query: 184 ECGLLQAWGYNEYGQLGRGITC-EGLQGPRVIKGYA----KFLDEA-PEL--EKITQVSC 235
E + + YN G+ T +G +G R+ G+A K + EL +VSC
Sbjct: 464 ETANDRKF-YNAKS-CGKLFTWGDGDKG-RL--GHADSKRKLVPTCVTELIDHDFIKVSC 518
Query: 236 GEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVA--LDGIFIKDVACGGV 293
G + A+S +G VYT G GQLG C ++ DK + VV L F+KD+A G
Sbjct: 519 GWTLTVALSISGTVYTMGSSIHGQLG-CP-RAKDKSV---NVVLGNLTRQFVKDIASGSH 573
Query: 294 HSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNG---VQLV 350
H LTS G +Y WG GQLGLG D RN P+LV P G V+ +
Sbjct: 574 HVAVLTSFGNVYTWGKGMNGQLGLG-------------DVRDRNSPVLVEPLGDRLVESI 620
Query: 351 ACG 353
ACG
Sbjct: 621 ACG 623
Score = 185 (70.2 bits), Expect = 9.4e-11, P = 9.4e-11
Identities = 55/199 (27%), Positives = 93/199 (46%)
Query: 219 KFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVV 278
K L+ A + + +S G H+A V+ GEV+ WG G+ G+LG L+ P+RV
Sbjct: 284 KLLESATMFD-VQSISLGAKHAALVTRQGEVFCWGNGNSGKLG---LKVNIDIDHPKRVE 339
Query: 279 ALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNI 338
+L+ + ++ VAC +CA+T G LY WG G + Q+ S L SD ++
Sbjct: 340 SLEDVAVRSVACSDHQTCAVTESGELYLWG-IDGGTI---EQSGSQFLTRKISDVLGGSL 395
Query: 339 PILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-E 397
+L V ACG HT + G++ +G ++G + P V+ +
Sbjct: 396 TVLSV-------ACGAWHTAIVTSSGQLFTYGSGTFGVLGHGSLESVTKPKEVESLRRMK 448
Query: 398 VRKLAAGGGHSAVLADACS 416
V ++ G H+A + + +
Sbjct: 449 VISVSCGPWHTAAIVETAN 467
Score = 179 (68.1 bits), Expect = 4.2e-10, P = 4.2e-10
Identities = 87/349 (24%), Positives = 150/349 (42%)
Query: 83 LFTWGANEFGQL-GDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND--GTI 139
+ WGA G + G + P+ ++ V+SIS GA A + E G
Sbjct: 261 IMIWGAIT-GLIDGSKNQNDALSPKLLESATMFDVQSISLGAKHAALVTRQGEVFCWGNG 319
Query: 140 STSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQL 199
++ +L + N + P+ + + V+C A++E G L WG +
Sbjct: 320 NSGKLGL-KVNIDIDHPKRVESL--EDVAVRSVACSDHQTCAVTESGELYLWGID----- 371
Query: 200 GRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQ 259
G T E G + + K D + V+CG +H+A V+ +G+++T+G G+ G
Sbjct: 372 --GGTIEQ-SGSQFLT--RKISDVLGGSLTVLSVACGAWHTAIVTSSGQLFTYGSGTFGV 426
Query: 260 LGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALT------------SKGALYAW 307
LGH SL+S K P+ V +L + + V+CG H+ A+ S G L+ W
Sbjct: 427 LGHGSLESVTK---PKEVESLRRMKVISVSCGPWHTAAIVETANDRKFYNAKSCGKLFTW 483
Query: 308 GGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIH 367
G G+LG R L+P + L+ + ++ V+CG + T+ G ++
Sbjct: 484 GDGDKGRLGHADSKRK--LVPT-------CVTELIDHDFIK-VSCGWTLTVALSISGTVY 533
Query: 368 GWGYNSYGQAANEKSTYAWYPSPVDWCVGE-----VRKLAAGGGHSAVL 411
G + +GQ ++ V+ +G V+ +A+G H AVL
Sbjct: 534 TMGSSIHGQLGCPRAK----DKSVNVVLGNLTRQFVKDIASGSHHVAVL 578
Score = 142 (55.0 bits), Expect = 4.6e-06, P = 4.6e-06
Identities = 34/80 (42%), Positives = 43/80 (53%)
Query: 66 DIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHC 125
DIA G H A + S G ++TWG GQLG G R P V+ L V+SI+CG +
Sbjct: 567 DIASGSHHVAVLTSFGNVYTWGKGMNGQLGLGDVRDRNSPVLVEPLGDRLVESIACGLNL 626
Query: 126 TAAIAEPRE---NDGTISTS 142
TAAI +E ND T +S
Sbjct: 627 TAAICLHKEISLNDQTACSS 646
>UNIPROTKB|Q15751 [details] [associations]
symbol:HERC1 "Probable E3 ubiquitin-protein ligase HERC1"
species:9606 "Homo sapiens" [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
[GO:0005794 "Golgi apparatus" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0005086 "ARF
guanyl-nucleotide exchange factor activity" evidence=TAS]
[GO:0005737 "cytoplasm" evidence=TAS] Pfam:PF00632
InterPro:IPR017986 InterPro:IPR000569 InterPro:IPR001680
InterPro:IPR003877 InterPro:IPR015943 Pfam:PF00400 Pfam:PF00622
PROSITE:PS50082 PROSITE:PS50237 PROSITE:PS50294 SMART:SM00119
SMART:SM00320 UniPathway:UPA00143 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005829 GO:GO:0005794 GO:GO:0016020 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006810
InterPro:IPR008985 SUPFAM:SSF49899 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 InterPro:IPR001870
InterPro:IPR018355 SMART:SM00449 PROSITE:PS50188 GO:GO:0005086
SUPFAM:SSF56204 eggNOG:COG5021 EMBL:U50078 EMBL:AC073167
EMBL:AC118274 EMBL:BC040929 IPI:IPI00022479 PIR:S71752
RefSeq:NP_003913.3 UniGene:Hs.210385 HSSP:Q922Y1
ProteinModelPortal:Q15751 SMR:Q15751 IntAct:Q15751 STRING:Q15751
PhosphoSite:Q15751 DMDM:296434522 PaxDb:Q15751 PRIDE:Q15751
Ensembl:ENST00000443617 GeneID:8925 KEGG:hsa:8925 UCSC:uc002amp.3
CTD:8925 GeneCards:GC15M063900 HGNC:HGNC:4867 HPA:HPA049749
MIM:605109 neXtProt:NX_Q15751 PharmGKB:PA29242 HOGENOM:HOG000168589
HOVERGEN:HBG053919 InParanoid:Q15751 KO:K10594 OMA:HHYQDGI
OrthoDB:EOG40GCPW GenomeRNAi:8925 NextBio:33556 ArrayExpress:Q15751
Bgee:Q15751 CleanEx:HS_HERC1 Genevestigator:Q15751 Uniprot:Q15751
Length = 4861
Score = 314 (115.6 bits), Expect = 2.7e-24, P = 2.7e-24
Identities = 107/372 (28%), Positives = 171/372 (45%)
Query: 47 KQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPE 106
K L P+L P+ ++++ ++ G T +++DG++ G +G+LG G + +
Sbjct: 392 KILQPKL--APSFSDAQTIE--AGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLK 447
Query: 107 KVKQLQSEFVKSISCG----AHCTAAIAEPREND-GTISTSRLWVWGQNQGSNFPRLFWG 161
K+ +K +S H A E G +L G + +P+L G
Sbjct: 448 KLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLG-HGNSSTQKYPKLIQG 506
Query: 162 AFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFL 221
++C VS G H A++E G L WG ++G+LG G + P ++K
Sbjct: 507 PLQGKVVVC-VSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDS-NSRNIPTLVK------ 558
Query: 222 DEAPELEKITQVSCGEYHSAAVSENGE-VYTWGLGSVGQLGHCSLQSGDKELL--PRRVV 278
++ + +VSCG H+ A+S++G V+++G G G+LGH GD + P+ +
Sbjct: 559 ----DISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGH-----GDTNRVYKPKVIE 609
Query: 279 ALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNI 338
AL G+FI+ V G S ALTS G +YAWG LG G + + +L P + I
Sbjct: 610 ALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGAC--LGCG-SSEATALRP-------KLI 659
Query: 339 PILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYA-WYPSPVDWCVG- 396
L V V+ G SH L D ++ WG NS GQ ST P V G
Sbjct: 660 EELAATRIVD-VSIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGI 718
Query: 397 EVRKLAAGGGHS 408
+++++AG HS
Sbjct: 719 AIQQISAGTSHS 730
Score = 301 (111.0 bits), Expect = 8.5e-23, P = 8.5e-23
Identities = 79/255 (30%), Positives = 131/255 (51%)
Query: 68 ACGHE-HTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCT 126
+CG + H+ A+ G +F+WG ++G+LG G + ++ P +++ LQ E V +SCG +
Sbjct: 4087 SCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHS 4146
Query: 127 AAIAEPRE--NDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSE 184
A + + G RL + G P I QV+CG H +A+S
Sbjct: 4147 AVVTSDGKLFTFGNGDYGRLGL-GNTSNKKLPERVTAL--EGYQIGQVACGLNHTLAVSA 4203
Query: 185 CG-LLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAV 243
G ++ A+G +YG+LG G + K + +D + I +V+CG S A+
Sbjct: 4204 DGSMVWAFGDGDYGKLGLGNS--------TAKSSPQKIDVLCGIG-IKKVACGTQFSVAL 4254
Query: 244 SENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGA 303
+++G VYT+G + L ++ ++ P+++ L G+ I+DVA G H+ AL S G
Sbjct: 4255 TKDGHVYTFGQDRLIGLPEGRARNHNR---PQQIPVLAGVIIEDVAVGAEHTLALASNGD 4311
Query: 304 LYAWGGSQAGQLGLG 318
+YAWG + GQLGLG
Sbjct: 4312 VYAWGSNSEGQLGLG 4326
Score = 269 (99.8 bits), Expect = 1.4e-17, Sum P(2) = 1.4e-17
Identities = 90/289 (31%), Positives = 132/289 (45%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ WG G+ G G + PK + L G + ++ G+ H+AAV DG
Sbjct: 479 VFSWGDGDYGKLGH-GNSSTQKYPKLIQGPLQGKVV------VCVSAGYRHSAAVTEDGE 531
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
L+TWG +FG+LG G R P VK + + V +SCG+ T A+++ DG
Sbjct: 532 LYTWGEGDFGRLGHGDSNSRNIPTLVKDISN--VGEVSCGSSHTIALSK----DGRT--- 582
Query: 143 RLWVWGQNQGSNFPRLFWG----AFTPNTI-------ICQVSCGSVHVVALSECGLLQAW 191
VW G N +L G + P I I +V GS +AL+ G + AW
Sbjct: 583 ---VWSFGGGDN-GKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAW 638
Query: 192 GYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYT 251
G LG G + P++I+ A +I VS G+ H A+S + EVY
Sbjct: 639 GCGAC--LGCGSSEATALRPKLIEELAA--------TRIVDVSIGDSHCLALSHDNEVYA 688
Query: 252 WGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTS 300
WG S+GQ G + S P++V LDGI I+ ++ G HS A T+
Sbjct: 689 WGNNSMGQCGQGN--STGPITKPKKVSGLDGIAIQQISAGTSHSLAWTA 735
Score = 268 (99.4 bits), Expect = 4.5e-19, P = 4.5e-19
Identities = 99/332 (29%), Positives = 149/332 (44%)
Query: 1 MDINEIIGETARPVD-NIPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAG 59
MD + T+RP D ++ K +Y+WG GQ GR + +P P F
Sbjct: 3976 MDEQIMSWATSRPEDWHLGGKCDVYLWGAGRHGQLAEAGRN--VMVPAAAPS--F----- 4026
Query: 60 ANSRWLDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSI 119
S+ + CG T + ++GT+ G +G+LG G + + LQ V +
Sbjct: 4027 --SQAQQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQL 4084
Query: 120 --SCGA--HCTAAIAEPRE--NDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVS 173
SCG+ H + A+ E E + G +L G + PR A ++ Q+S
Sbjct: 4085 VTSCGSDGH-SMALTESGEVFSWGDGDYGKLG-HGNSDRQRRPRQI-EALQGEEVV-QMS 4140
Query: 174 CGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRV--IKGYAKFLDEAPELEKIT 231
CG H ++ G L +G +YG+LG G T RV ++GY +I
Sbjct: 4141 CGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGY-----------QIG 4189
Query: 232 QVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACG 291
QV+CG H+ AVS +G + W G G G L + + P+++ L GI IK VACG
Sbjct: 4190 QVACGLNHTLAVSADGSM-VWAFGD-GDYGKLGLGNSTAKSSPQKIDVLCGIGIKKVACG 4247
Query: 292 GVHSCALTSKGALYAWGGSQAGQLGLGPQTRS 323
S ALT G +Y +G Q +GL P+ R+
Sbjct: 4248 TQFSVALTKDGHVYTFG--QDRLIGL-PEGRA 4276
Score = 265 (98.3 bits), Expect = 9.7e-19, P = 9.7e-19
Identities = 93/311 (29%), Positives = 146/311 (46%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ WG G+ G +RQ R P+Q+ L G + ++CG +H+A V SDG
Sbjct: 4103 VFSWGDGDYGKLGHGNSDRQRR-PRQIEA-LQG------EEVVQMSCGFKHSAVVTSDGK 4154
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
LFT+G ++G+LG G +K PE+V L+ + ++CG + T A++ DG S
Sbjct: 4155 LFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSA----DG----S 4206
Query: 143 RLWVWGQNQGSNFPRLFWGAFTPNT------IIC-----QVSCGSVHVVALSECGLLQAW 191
+W +G ++ +L G T + ++C +V+CG+ VAL++ G + +
Sbjct: 4207 MVWAFGDG---DYGKLGLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTF 4263
Query: 192 GYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYT 251
G + L G P+ I A + I V+ G H+ A++ NG+VY
Sbjct: 4264 GQDRLIGLPEG-RARNHNRPQQIPVLAGVI--------IEDVAVGAEHTLALASNGDVYA 4314
Query: 252 WGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGAL-YAWGGS 310
WG S GQLG L + P V L G ++ ++ G HS A T+ A G S
Sbjct: 4315 WGSNSEGQLG---LGHTNHVREPTLVTGLQGKNVRQISAGRCHSAAWTAPPVPPRAPGVS 4371
Query: 311 QAGQLGLGPQT 321
QLGL P T
Sbjct: 4372 VPLQLGL-PDT 4381
Score = 262 (97.3 bits), Expect = 2.1e-18, P = 2.1e-18
Identities = 81/253 (32%), Positives = 126/253 (49%)
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTI--- 139
++ WG+N QL +GT+E P+ ++I G +CT I+ DG++
Sbjct: 374 VYVWGSNSSHQLVEGTQEKILQPKLAPSFSD--AQTIEAGQYCTFVIS----TDGSVRAC 427
Query: 140 ---STSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSC--GSV-HVVALSECGLLQAWGY 193
S RL + N S +L F P+ I +VS GS H +A + G + +WG
Sbjct: 428 GKGSYGRLGLGDSNNQSTLKKL---TFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGD 484
Query: 194 NEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQ-VSCGEYHSAAVSENGEVYTW 252
+YG+LG G + P++I+G P K+ VS G HSAAV+E+GE+YTW
Sbjct: 485 GDYGKLGHG-NSSTQKYPKLIQG--------PLQGKVVVCVSAGYRHSAAVTEDGELYTW 535
Query: 253 GLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKG-ALYAWGGSQ 311
G G G+LGH S + +P V + + +V+CG H+ AL+ G ++++GG
Sbjct: 536 GEGDFGRLGHGDSNSRN---IPTLVKDISNV--GEVSCGSSHTIALSKDGRTVWSFGGGD 590
Query: 312 AGQLGLGPQTRSF 324
G+LG G R +
Sbjct: 591 NGKLGHGDTNRVY 603
Score = 235 (87.8 bits), Expect = 2.0e-15, P = 2.0e-15
Identities = 78/281 (27%), Positives = 123/281 (43%)
Query: 141 TSRLWVWGQNQGSNF-----PRLFWGAFTPNTIICQ-VSCGSVHVVALSECGLLQAWGYN 194
T ++VWG N ++ P+ Q + G +S G ++A G
Sbjct: 371 TCEVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQTIEAGQYCTFVISTDGSVRACGKG 430
Query: 195 EYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGL 254
YG+LG G + +K + ++K++ + H+ A + GEV++WG
Sbjct: 431 SYGRLGLGDS----NNQSTLKKLT--FEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGD 484
Query: 255 GSVGQLGHCSLQSGDKELLPRRVVA-LDGIFIKDVACGGVHSCALTSKGALYAWGGSQAG 313
G G+LGH + S K P+ + L G + V+ G HS A+T G LY WG G
Sbjct: 485 GDYGKLGHGN-SSTQK--YPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFG 541
Query: 314 QLGLGPQTRSFSLIPNESDTYFRNIPILVVP-NGVQLVACGHSHTLVYMRDGR-IHGWGY 371
+LG G D+ RNIP LV + V V+CG SHT+ +DGR + +G
Sbjct: 542 RLGHG-------------DSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGG 588
Query: 372 NSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVL 411
G+ + + + P ++ G +RK+ AG S L
Sbjct: 589 GDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLAL 629
Score = 213 (80.0 bits), Expect = 9.3e-23, Sum P(2) = 9.3e-23
Identities = 66/184 (35%), Positives = 95/184 (51%)
Query: 229 KITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDV 288
+I QV+CG H+ AVS +G + W G G G L + + P+++ L GI IK V
Sbjct: 4187 QIGQVACGLNHTLAVSADGSM-VWAFGD-GDYGKLGLGNSTAKSSPQKIDVLCGIGIKKV 4244
Query: 289 ACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQ 348
ACG S ALT G +Y +G Q +GL P+ R+ N + + IP+L GV
Sbjct: 4245 ACGTQFSVALTKDGHVYTFG--QDRLIGL-PEGRA----RNHNRP--QQIPVLA---GVI 4292
Query: 349 L--VACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGG 405
+ VA G HTL +G ++ WG NS GQ + + P+ V G+ VR+++AG
Sbjct: 4293 IEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVREPTLVTGLQGKNVRQISAGR 4352
Query: 406 GHSA 409
HSA
Sbjct: 4353 CHSA 4356
Score = 184 (69.8 bits), Expect = 1.5e-19, Sum P(2) = 1.5e-19
Identities = 69/228 (30%), Positives = 100/228 (43%)
Query: 191 WGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVY 250
WG +GQL G V+ A AP + QV CG+ + + NG V
Sbjct: 4002 WGAGRHGQLAEA-------GRNVMVPAA-----APSFSQAQQVICGQNCTFVIQANGTVL 4049
Query: 251 TWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDV--ACGGV-HSCALTSKGALYAW 307
G GS G+LG + S D +L + AL G + + +CG HS ALT G +++W
Sbjct: 4050 ACGEGSYGRLGQGN--SDDLHVLTV-ISALQGFVVTQLVTSCGSDGHSMALTESGEVFSW 4106
Query: 308 GGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIH 367
G G+LG G R P R I L VQ+ +CG H+ V DG++
Sbjct: 4107 GDGDYGKLGHGNSDRQRR--P-------RQIEALQGEEVVQM-SCGFKHSAVVTSDGKLF 4156
Query: 368 GWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHS-AVLAD 413
+G YG+ ++ P V G ++ ++A G H+ AV AD
Sbjct: 4157 TFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSAD 4204
Score = 148 (57.2 bits), Expect = 9.3e-23, Sum P(2) = 9.3e-23
Identities = 49/185 (26%), Positives = 82/185 (44%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+YVWG N S Q +E K L P+L P+ ++++ ++ G T +++DG+
Sbjct: 374 VYVWGSNSSHQLVEGTQE------KILQPKL--APSFSDAQTIE--AGQYCTFVISTDGS 423
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCG----AHCTAAIAEPREND-G 137
+ G +G+LG G + +K+ +K +S H A E G
Sbjct: 424 VRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWG 483
Query: 138 TISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYG 197
+L G + +P+L G ++C VS G H A++E G L WG ++G
Sbjct: 484 DGDYGKLG-HGNSSTQKYPKLIQGPLQGKVVVC-VSAGYRHSAAVTEDGELYTWGEGDFG 541
Query: 198 QLGRG 202
+LG G
Sbjct: 542 RLGHG 546
Score = 48 (22.0 bits), Expect = 0.00028, Sum P(3) = 0.00028
Identities = 17/50 (34%), Positives = 23/50 (46%)
Query: 221 LDEAPELEKITQVSCG-EYHSAAVSENGEVYTWGLGSVGQ-LGHCSLQSG 268
L+E E I +VS E + ENG++ T G G G L + SG
Sbjct: 2021 LEEEDENLPIQEVSFDPEKAQCCLVENGQILTHGSGGKGYGLASTGVTSG 2070
Score = 38 (18.4 bits), Expect = 1.4e-17, Sum P(2) = 1.4e-17
Identities = 12/41 (29%), Positives = 16/41 (39%)
Query: 287 DVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLI 327
D+ V + A +G AW G L +G S LI
Sbjct: 3522 DIQPHWVSALAWPEEGPATAWSGESPELLLVGRMDGSLGLI 3562
>UNIPROTKB|E1C4H7 [details] [associations]
symbol:HERC1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] Pfam:PF00632 InterPro:IPR017986
InterPro:IPR000569 InterPro:IPR001680 InterPro:IPR003877
InterPro:IPR015880 InterPro:IPR015943 Pfam:PF00400 Pfam:PF00622
PROSITE:PS50082 PROSITE:PS50237 PROSITE:PS50294 SMART:SM00119
SMART:SM00320 SMART:SM00355 INTERPRO:IPR000408 Pfam:PF00415
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0008270 GO:GO:0016567 GO:GO:0005622
InterPro:IPR008985 SUPFAM:SSF49899 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 InterPro:IPR001870
InterPro:IPR018355 SMART:SM00449 PROSITE:PS50188 SUPFAM:SSF56204
OMA:HHYQDGI GeneTree:ENSGT00700000104312 EMBL:AADN02040444
EMBL:AADN02040445 EMBL:AADN02040446 IPI:IPI00593079
Ensembl:ENSGALT00000005344 Uniprot:E1C4H7
Length = 4863
Score = 314 (115.6 bits), Expect = 2.7e-24, P = 2.7e-24
Identities = 106/372 (28%), Positives = 171/372 (45%)
Query: 47 KQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPE 106
K L P+L P+ ++++ ++ G T +++DG++ G +G+LG G + +
Sbjct: 392 KILQPKL--APSFSDAQTIE--AGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLK 447
Query: 107 KVKQLQSEFVKSISCG----AHCTAAIAEPREND-GTISTSRLWVWGQNQGSNFPRLFWG 161
K+ +K +S H A E G +L G + +P+L G
Sbjct: 448 KLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLG-HGNSSTQKYPKLIQG 506
Query: 162 AFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFL 221
++C VS G H A++E G L WG ++G+LG G + P ++K
Sbjct: 507 PLQGKVVVC-VSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDS-NSRNIPTLVK------ 558
Query: 222 DEAPELEKITQVSCGEYHSAAVSENGE-VYTWGLGSVGQLGHCSLQSGDKELL--PRRVV 278
++ + +VSCG H+ A+S++G V+++G G G+LGH GD + P+ +
Sbjct: 559 ----DISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGH-----GDTNRVYKPKVIE 609
Query: 279 ALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNI 338
AL G+FI+ V G S ALTS G +YAWG LG G + + +L P + I
Sbjct: 610 ALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGAC--LGCG-SSEATALRP-------KLI 659
Query: 339 PILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYA-WYPSPVDWCVG- 396
L V ++ G SH L D ++ WG NS GQ ST P V G
Sbjct: 660 EELAATRIVD-ISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGV 718
Query: 397 EVRKLAAGGGHS 408
+++++AG HS
Sbjct: 719 SIQQISAGTSHS 730
Score = 312 (114.9 bits), Expect = 4.6e-24, P = 4.6e-24
Identities = 83/255 (32%), Positives = 133/255 (52%)
Query: 68 ACGHE-HTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCG-AHC 125
+CG + H+ A+ G +F+WG ++G+LG G + ++ P +++ LQ E V +SCG H
Sbjct: 4087 SCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHS 4146
Query: 126 TAAIAEPRE-NDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSE 184
A+ + G RL + G P I QV+CG H VA+S
Sbjct: 4147 AVVTADGKLFTFGNGDYGRLGL-GNTSNKKLPERVTAL--EGYQIGQVACGLNHTVAVST 4203
Query: 185 CG-LLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAV 243
G ++ A+G +YG+LG G + K + +D + I +V+CG S A+
Sbjct: 4204 DGSMVWAFGDGDYGKLGLGNS--------TAKSSPQKVDILCGIG-IKKVACGTQFSVAL 4254
Query: 244 SENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGA 303
+++G VYT+G S +G ++ + P++V L G+FI+D+A G H+ AL+S G
Sbjct: 4255 TKDGHVYTFGQVSDRLIGLPEGRARNHNR-PQQVPVLSGVFIEDIAVGAEHTLALSSTGD 4313
Query: 304 LYAWGGSQAGQLGLG 318
+YAWG + GQLGLG
Sbjct: 4314 VYAWGSNSEGQLGLG 4328
Score = 270 (100.1 bits), Expect = 2.7e-19, P = 2.7e-19
Identities = 99/332 (29%), Positives = 148/332 (44%)
Query: 1 MDINEIIGETARPVD-NIPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAG 59
MD + T+RP D ++ K +Y+WG GQ GR + +P P F
Sbjct: 3976 MDEQIMSWATSRPEDWHLGGKCDVYLWGAGRHGQLAEAGRN--VMVPVAAPS--F----- 4026
Query: 60 ANSRWLDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSI 119
S+ + CG T + ++GT+ G +G+LG G + + LQ V +
Sbjct: 4027 --SQAQQVVCGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQL 4084
Query: 120 --SCGA--HCTAAIAEPRE--NDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVS 173
SCG+ H + A+ E E + G +L G + PR A ++ Q+S
Sbjct: 4085 VTSCGSDGH-SMALTESGEVFSWGDGDYGKLG-HGNSDRQRRPRQI-EALQGEEVV-QMS 4140
Query: 174 CGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRV--IKGYAKFLDEAPELEKIT 231
CG H ++ G L +G +YG+LG G T RV ++GY +I
Sbjct: 4141 CGFKHSAVVTADGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGY-----------QIG 4189
Query: 232 QVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACG 291
QV+CG H+ AVS +G + W G G G L + + P++V L GI IK VACG
Sbjct: 4190 QVACGLNHTVAVSTDGSM-VWAFGD-GDYGKLGLGNSTAKSSPQKVDILCGIGIKKVACG 4247
Query: 292 GVHSCALTSKGALYAWGGSQAGQLGLGPQTRS 323
S ALT G +Y +G +GL P+ R+
Sbjct: 4248 TQFSVALTKDGHVYTFGQVSDRLIGL-PEGRA 4278
Score = 267 (99.0 bits), Expect = 5.8e-19, P = 5.8e-19
Identities = 88/289 (30%), Positives = 132/289 (45%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ WG G+ G G + PK + L G + ++ G+ H+AAV DG
Sbjct: 479 VFSWGDGDYGKLGH-GNSSTQKYPKLIQGPLQGKVV------VCVSAGYRHSAAVTEDGE 531
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
L+TWG +FG+LG G R P VK + + V +SCG+ T A+++ DG
Sbjct: 532 LYTWGEGDFGRLGHGDSNSRNIPTLVKDISN--VGEVSCGSSHTIALSK----DGRT--- 582
Query: 143 RLWVWGQNQGSNFPRLFWG----AFTPNTI-------ICQVSCGSVHVVALSECGLLQAW 191
VW G N +L G + P I I +V GS +AL+ G + AW
Sbjct: 583 ---VWSFGGGDN-GKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAW 638
Query: 192 GYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYT 251
G LG G + P++I+ A +I +S G+ H A+S + EVY
Sbjct: 639 GCGAC--LGCGSSEATALRPKLIEELAA--------TRIVDISIGDSHCLALSHDNEVYA 688
Query: 252 WGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTS 300
WG S+GQ G + S P++V LDG+ I+ ++ G HS A T+
Sbjct: 689 WGNNSMGQCGQGN--STGPITKPKKVSGLDGVSIQQISAGTSHSLAWTA 735
Score = 262 (97.3 bits), Expect = 2.1e-18, P = 2.1e-18
Identities = 81/253 (32%), Positives = 126/253 (49%)
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTI--- 139
++ WG+N QL +GT+E P+ ++I G +CT I+ DG++
Sbjct: 374 VYVWGSNSSHQLVEGTQEKILQPKLAPSFSD--AQTIEAGQYCTFVIS----TDGSVRAC 427
Query: 140 ---STSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSC--GSV-HVVALSECGLLQAWGY 193
S RL + N S +L F P+ I +VS GS H +A + G + +WG
Sbjct: 428 GKGSYGRLGLGDSNNQSTLKKL---TFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGD 484
Query: 194 NEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQ-VSCGEYHSAAVSENGEVYTW 252
+YG+LG G + P++I+G P K+ VS G HSAAV+E+GE+YTW
Sbjct: 485 GDYGKLGHG-NSSTQKYPKLIQG--------PLQGKVVVCVSAGYRHSAAVTEDGELYTW 535
Query: 253 GLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKG-ALYAWGGSQ 311
G G G+LGH S + +P V + + +V+CG H+ AL+ G ++++GG
Sbjct: 536 GEGDFGRLGHGDSNSRN---IPTLVKDISNV--GEVSCGSSHTIALSKDGRTVWSFGGGD 590
Query: 312 AGQLGLGPQTRSF 324
G+LG G R +
Sbjct: 591 NGKLGHGDTNRVY 603
Score = 256 (95.2 bits), Expect = 9.6e-18, P = 9.6e-18
Identities = 92/309 (29%), Positives = 148/309 (47%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ WG G+ G +RQ R P+Q+ L G + ++CG +H+A V +DG
Sbjct: 4103 VFSWGDGDYGKLGHGNSDRQRR-PRQIEA-LQG------EEVVQMSCGFKHSAVVTADGK 4154
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
LFT+G ++G+LG G +K PE+V L+ + ++CG + T A++ DG S
Sbjct: 4155 LFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTVAVS----TDG----S 4206
Query: 143 RLWVWGQNQGSNFPRLFWGAFTPNT------IIC-----QVSCGSVHVVALSECGLLQAW 191
+W +G ++ +L G T + I+C +V+CG+ VAL++ G +
Sbjct: 4207 MVWAFGDG---DYGKLGLGNSTAKSSPQKVDILCGIGIKKVACGTQFSVALTKDGHV--- 4260
Query: 192 GYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEK--ITQVSCGEYHSAAVSENGEV 249
Y +GQ+ + GL R + + + + P L I ++ G H+ A+S G+V
Sbjct: 4261 -YT-FGQVSDRLI--GLPEGRA-RNHNR-PQQVPVLSGVFIEDIAVGAEHTLALSSTGDV 4314
Query: 250 YTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGAL-YAWG 308
Y WG S GQLG L + P + L G I+ ++ G HS A T+ A G
Sbjct: 4315 YAWGSNSEGQLG---LGHTNHVREPTLITVLQGKNIRQISAGRCHSAAWTAPPVPPRAPG 4371
Query: 309 GSQAGQLGL 317
S QLGL
Sbjct: 4372 VSVPLQLGL 4380
Score = 235 (87.8 bits), Expect = 2.0e-15, P = 2.0e-15
Identities = 78/281 (27%), Positives = 123/281 (43%)
Query: 141 TSRLWVWGQNQGSNF-----PRLFWGAFTPNTIICQ-VSCGSVHVVALSECGLLQAWGYN 194
T ++VWG N ++ P+ Q + G +S G ++A G
Sbjct: 371 TCEVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQTIEAGQYCTFVISTDGSVRACGKG 430
Query: 195 EYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGL 254
YG+LG G + +K + ++K++ + H+ A + GEV++WG
Sbjct: 431 SYGRLGLGDS----NNQSTLKKLT--FEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGD 484
Query: 255 GSVGQLGHCSLQSGDKELLPRRVVA-LDGIFIKDVACGGVHSCALTSKGALYAWGGSQAG 313
G G+LGH + S K P+ + L G + V+ G HS A+T G LY WG G
Sbjct: 485 GDYGKLGHGN-SSTQK--YPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFG 541
Query: 314 QLGLGPQTRSFSLIPNESDTYFRNIPILVVP-NGVQLVACGHSHTLVYMRDGR-IHGWGY 371
+LG G D+ RNIP LV + V V+CG SHT+ +DGR + +G
Sbjct: 542 RLGHG-------------DSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGG 588
Query: 372 NSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVL 411
G+ + + + P ++ G +RK+ AG S L
Sbjct: 589 GDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLAL 629
Score = 210 (79.0 bits), Expect = 2.0e-22, Sum P(2) = 2.0e-22
Identities = 62/184 (33%), Positives = 94/184 (51%)
Query: 229 KITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDV 288
+I QV+CG H+ AVS +G + W G G G L + + P++V L GI IK V
Sbjct: 4187 QIGQVACGLNHTVAVSTDGSM-VWAFGD-GDYGKLGLGNSTAKSSPQKVDILCGIGIKKV 4244
Query: 289 ACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQ 348
ACG S ALT G +Y +G +GL P+ R+ N + + +P+L +GV
Sbjct: 4245 ACGTQFSVALTKDGHVYTFGQVSDRLIGL-PEGRA----RNHNRP--QQVPVL---SGVF 4294
Query: 349 L--VACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGG 405
+ +A G HTL G ++ WG NS GQ + + P+ + G+ +R+++AG
Sbjct: 4295 IEDIAVGAEHTLALSSTGDVYAWGSNSEGQLGLGHTNHVREPTLITVLQGKNIRQISAGR 4354
Query: 406 GHSA 409
HSA
Sbjct: 4355 CHSA 4358
Score = 181 (68.8 bits), Expect = 3.1e-19, Sum P(2) = 3.1e-19
Identities = 68/228 (29%), Positives = 99/228 (43%)
Query: 191 WGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVY 250
WG +GQL G V+ A AP + QV CG+ + + NG V
Sbjct: 4002 WGAGRHGQLAEA-------GRNVMVPVA-----APSFSQAQQVVCGQNCTFVIQANGTVL 4049
Query: 251 TWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDV--ACGGV-HSCALTSKGALYAW 307
G GS G+LG + S D +L + AL G + + +CG HS ALT G +++W
Sbjct: 4050 ACGEGSYGRLGQGN--SDDLHVLTV-ISALQGFVVTQLVTSCGSDGHSMALTESGEVFSW 4106
Query: 308 GGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIH 367
G G+LG G R P R I L VQ+ +CG H+ V DG++
Sbjct: 4107 GDGDYGKLGHGNSDRQRR--P-------RQIEALQGEEVVQM-SCGFKHSAVVTADGKLF 4156
Query: 368 GWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHS-AVLAD 413
+G YG+ ++ P V G ++ ++A G H+ AV D
Sbjct: 4157 TFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTVAVSTD 4204
Score = 148 (57.2 bits), Expect = 2.0e-22, Sum P(2) = 2.0e-22
Identities = 49/185 (26%), Positives = 82/185 (44%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+YVWG N S Q +E K L P+L P+ ++++ ++ G T +++DG+
Sbjct: 374 VYVWGSNSSHQLVEGTQE------KILQPKL--APSFSDAQTIE--AGQYCTFVISTDGS 423
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCG----AHCTAAIAEPREND-G 137
+ G +G+LG G + +K+ +K +S H A E G
Sbjct: 424 VRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWG 483
Query: 138 TISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYG 197
+L G + +P+L G ++C VS G H A++E G L WG ++G
Sbjct: 484 DGDYGKLG-HGNSSTQKYPKLIQGPLQGKVVVC-VSAGYRHSAAVTEDGELYTWGEGDFG 541
Query: 198 QLGRG 202
+LG G
Sbjct: 542 RLGHG 546
Score = 45 (20.9 bits), Expect = 5.2e-05, Sum P(2) = 5.2e-05
Identities = 17/49 (34%), Positives = 22/49 (44%)
Query: 222 DEAPELEKITQVSCG-EYHSAAVSENGEVYTWGLGSVGQ-LGHCSLQSG 268
DE L I +VS E + ENG++ T G G G L + SG
Sbjct: 2023 DEDENLP-IQEVSFDPEKAQCCIVENGQILTHGSGGKGYGLASTGVTSG 2070
Score = 40 (19.1 bits), Expect = 3.4e-11, Sum P(2) = 3.4e-11
Identities = 13/41 (31%), Positives = 22/41 (53%)
Query: 106 EKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTSRLWV 146
E+ + + S+ K ISC A+ + A+ N T S ++L V
Sbjct: 3247 ERSRGIHSKTSKPISCLAYLSTAVGCLASN--TPSAAKLLV 3285
>TAIR|locus:504956339 [details] [associations]
symbol:RUG1 "AT5G08710" species:3702 "Arabidopsis
thaliana" [GO:0003682 "chromatin binding" evidence=ISS] [GO:0008150
"biological_process" evidence=ND] [GO:0008536 "Ran GTPase binding"
evidence=ISS] INTERPRO:IPR000408 Pfam:PF00415 EMBL:CP002688
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 eggNOG:COG5184
EMBL:BT005498 EMBL:AK118882 IPI:IPI00533904 RefSeq:NP_680156.2
UniGene:At.45869 ProteinModelPortal:Q8GWF2 SMR:Q8GWF2 PRIDE:Q8GWF2
EnsemblPlants:AT5G08710.1 GeneID:830771 KEGG:ath:AT5G08710
TAIR:At5g08710 HOGENOM:HOG000006005 InParanoid:Q8GWF2 OMA:HSACIDE
PhylomeDB:Q8GWF2 ProtClustDB:CLSN2690903 Genevestigator:Q8GWF2
Uniprot:Q8GWF2
Length = 434
Score = 295 (108.9 bits), Expect = 3.2e-24, P = 3.2e-24
Identities = 99/340 (29%), Positives = 149/340 (43%)
Query: 86 WGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRE--NDGTISTSR 143
WG+ ++G+LG G + + P L + +++CG T + E R G +
Sbjct: 54 WGSGDYGRLGLGNLDSQWTPAVCSALSDHSITAVACGGAHTLFLTETRRVFATGLNDCGQ 113
Query: 144 LWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGI 203
L V + P G + I +S G H A++ G L WG N GQLG G
Sbjct: 114 LGVSDVKSHAMDPLEVSGL---DKDILHISAGYYHSAAITVDGELYMWGKNSSGQLGLG- 169
Query: 204 TCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHC 263
+ RV++ K EA I V+ G HS AV++ GEV +WG G G+LGH
Sbjct: 170 ----KKAARVVRVPTKV--EALHGITIQSVALGSEHSVAVTDGGEVLSWGGGGSGRLGHG 223
Query: 264 SLQS------GDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGL 317
S + E PR + L+GI + +VA G +HS G+ + +G ++G
Sbjct: 224 HQSSLFGILRSNSEFTPRLIKELEGIKVTNVAAGLLHSACTDENGSAFMFGEKSINKMGF 283
Query: 318 GPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQA 377
G + N + I VP + VACG HT V R G ++ WG N G
Sbjct: 284 GG-------VRNATTPSI----ISEVPYAEE-VACGGYHTCVVTRGGELYTWGSNENGCL 331
Query: 378 ANEKSTYAWYPSPV----DWCVGEVRKLAAGGGHSAVLAD 413
+ STY + SPV + V +++ G H+A ++D
Sbjct: 332 GTD-STYVSH-SPVRVEGPFLESTVSQVSCGWKHTAAISD 369
Score = 291 (107.5 bits), Expect = 1.0e-23, P = 1.0e-23
Identities = 108/380 (28%), Positives = 167/380 (43%)
Query: 11 ARPVDNIPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACG 70
+R V + K +WG SG GR G + Q P + C A ++ +ACG
Sbjct: 39 SRWVSSESGKRFAAMWG---SGDYGRLGLGN---LDSQWTPAV--CSALSDHSITAVACG 90
Query: 71 HEHTAAVASDGTLFTWGANEFGQLG-DGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAI 129
HT + +F G N+ GQLG + P +V L + + IS G + +AAI
Sbjct: 91 GAHTLFLTETRRVFATGLNDCGQLGVSDVKSHAMDPLEVSGLDKDILH-ISAGYYHSAAI 149
Query: 130 AEPRENDGTISTSRLWVWGQNQGSNF---PRLFWGAFTPNTI-------ICQVSCGSVHV 179
DG L++WG+N + P + I V+ GS H
Sbjct: 150 TV----DG-----ELYMWGKNSSGQLGLGKKAARVVRVPTKVEALHGITIQSVALGSEHS 200
Query: 180 VALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEA-PELE--KITQVSCG 236
VA+++ G + +WG G+LG G L G +++ ++F ELE K+T V+ G
Sbjct: 201 VAVTDGGEVLSWGGGGSGRLGHGHQ-SSLFG--ILRSNSEFTPRLIKELEGIKVTNVAAG 257
Query: 237 EYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSC 296
HSA ENG + +G S+ ++G +++ + V + ++VACGG H+C
Sbjct: 258 LLHSACTDENGSAFMFGEKSINKMGFGGVRNATTPSIISEVP-----YAEEVACGGYHTC 312
Query: 297 ALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSH 356
+T G LY WG ++ G LG S S + E P L + V V+CG H
Sbjct: 313 VVTRGGELYTWGSNENGCLGTDSTYVSHSPVRVEG-------PFL--ESTVSQVSCGWKH 363
Query: 357 TLVYMRDGRIHGWGYN-SYG 375
T + D + WG+ S+G
Sbjct: 364 TAA-ISDNNVFTWGWGGSHG 382
Score = 240 (89.5 bits), Expect = 1.3e-17, P = 1.3e-17
Identities = 90/323 (27%), Positives = 141/323 (43%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ G N GQ G + P ++ +G + L I+ G+ H+AA+ DG
Sbjct: 103 VFATGLNDCGQLGVSDVKSHAMDPLEV--------SGLDKDILHISAGYYHSAAITVDGE 154
Query: 83 LFTWGANEFGQLGDGTEEGR--KHPEKVKQLQSEFVKSISCGAHCTAAIAEPRE--NDGT 138
L+ WG N GQLG G + R + P KV+ L ++S++ G+ + A+ + E + G
Sbjct: 155 LYMWGKNSSGQLGLGKKAARVVRVPTKVEALHGITIQSVALGSEHSVAVTDGGEVLSWGG 214
Query: 139 ISTSRLWVWGQNQGSNFPRLFWGA-FTPNTI-------ICQVSCGSVHVVALSECGLLQA 190
+ RL G +Q S F L + FTP I + V+ G +H E G
Sbjct: 215 GGSGRLG-HG-HQSSLFGILRSNSEFTPRLIKELEGIKVTNVAAGLLHSACTDENGSAFM 272
Query: 191 WGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVY 250
+G ++G G G++ + E P E +V+CG YH+ V+ GE+Y
Sbjct: 273 FGEKSINKMGFG----GVRNATT----PSIISEVPYAE---EVACGGYHTCVVTRGGELY 321
Query: 251 TWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKD----VACGGVHSCALTSKGAL-Y 305
TWG G LG D + V ++G F++ V+CG H+ A++ +
Sbjct: 322 TWGSNENGCLGT------DSTYVSHSPVRVEGPFLESTVSQVSCGWKHTAAISDNNVFTW 375
Query: 306 AWGGSQA----------GQLGLG 318
WGGS GQLG G
Sbjct: 376 GWGGSHGTFSVDGHSSGGQLGHG 398
Score = 221 (82.9 bits), Expect = 2.0e-15, P = 2.0e-15
Identities = 90/304 (29%), Positives = 134/304 (44%)
Query: 17 IPAKSAIYVWGYNHSGQTGR-KGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTA 75
I +Y+WG N SGQ G K R +R+P ++ L G + +A G EH+
Sbjct: 149 ITVDGELYMWGKNSSGQLGLGKKAARVVRVPTKVEA-LHGITIQS------VALGSEHSV 201
Query: 76 AVASDGTLFTWGANEFGQLGDGTEEG-----RKH----PEKVKQLQSEFVKSISCGAHCT 126
AV G + +WG G+LG G + R + P +K+L+ V +++ G +
Sbjct: 202 AVTDGGEVLSWGGGGSGRLGHGHQSSLFGILRSNSEFTPRLIKELEGIKVTNVAAGLLHS 261
Query: 127 AAIAEPREND--GTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSE 184
A E G S +++ G + P + + P +V+CG H ++
Sbjct: 262 ACTDENGSAFMFGEKSINKMGFGGVRNATT-PSII--SEVPYAE--EVACGGYHTCVVTR 316
Query: 185 CGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEK-ITQVSCGEYHSAAV 243
G L WG NE G LG T RV E P LE ++QVSCG H+AA+
Sbjct: 317 GGELYTWGSNENGCLGTDSTYVSHSPVRV---------EGPFLESTVSQVSCGWKHTAAI 367
Query: 244 SENGEVYTWGLG-SVGQL---GHCS---LQSG-DKELLPRRVVALD-GIFIKDVACGGVH 294
S+N V+TWG G S G GH S L G D + +V L + ++CG H
Sbjct: 368 SDNN-VFTWGWGGSHGTFSVDGHSSGGQLGHGSDVDYARPAMVDLGKNVRAVHISCGFNH 426
Query: 295 SCAL 298
+ A+
Sbjct: 427 TAAV 430
Score = 144 (55.7 bits), Expect = 8.1e-07, P = 8.1e-07
Identities = 59/239 (24%), Positives = 98/239 (41%)
Query: 26 WGYNHSGQTGRKGRERQL----RIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDG 81
WG SG+ G G + L R + P L G + ++A G H+A +G
Sbjct: 212 WGGGGSGRLGH-GHQSSLFGILRSNSEFTPRLIKELEGI--KVTNVAAGLLHSACTDENG 268
Query: 82 TLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIST 141
+ F +G ++G G P + ++ + + ++CG + T + E
Sbjct: 269 SAFMFGEKSINKMGFGGVRNATTPSIISEVP--YAEEVACGGYHTCVVTRGGE------- 319
Query: 142 SRLWVWGQNQG----------SNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAW 191
L+ WG N+ S+ P G F +T+ QVSCG H A+S+ + W
Sbjct: 320 --LYTWGSNENGCLGTDSTYVSHSPVRVEGPFLESTV-SQVSCGWKHTAAISDNNVF-TW 375
Query: 192 GYN-EYGQLG-RGITCEGLQGPRVIKGYAK--FLDEAPELEKITQVSCGEYHSAAVSEN 246
G+ +G G + G G YA+ +D + + +SCG H+AAV E+
Sbjct: 376 GWGGSHGTFSVDGHSSGGQLGHGSDVDYARPAMVDLGKNVRAV-HISCGFNHTAAVLEH 433
>UNIPROTKB|F1MNS0 [details] [associations]
symbol:HERC1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005622 "intracellular" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] Pfam:PF00632
InterPro:IPR017986 InterPro:IPR000569 InterPro:IPR001680
InterPro:IPR003877 InterPro:IPR015943 Pfam:PF00400 Pfam:PF00622
PROSITE:PS50082 PROSITE:PS50237 PROSITE:PS50294 SMART:SM00119
SMART:SM00320 INTERPRO:IPR000408 Pfam:PF00415 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0016567
GO:GO:0005622 InterPro:IPR008985 SUPFAM:SSF49899 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 InterPro:IPR001870
InterPro:IPR018355 SMART:SM00449 PROSITE:PS50188 SUPFAM:SSF56204
OMA:HHYQDGI GeneTree:ENSGT00700000104312 EMBL:DAAA02028744
EMBL:DAAA02028745 EMBL:DAAA02028746 IPI:IPI00924381
Ensembl:ENSBTAT00000061038 ArrayExpress:F1MNS0 Uniprot:F1MNS0
Length = 4857
Score = 313 (115.2 bits), Expect = 3.5e-24, P = 3.5e-24
Identities = 106/372 (28%), Positives = 171/372 (45%)
Query: 47 KQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPE 106
K L P+L P+ ++++ ++ G T +++DG++ G +G+LG G + +
Sbjct: 392 KILQPKL--APSFSDAQTIE--AGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLK 447
Query: 107 KVKQLQSEFVKSISCG----AHCTAAIAEPREND-GTISTSRLWVWGQNQGSNFPRLFWG 161
K+ +K +S H A E G +L G + +P+L G
Sbjct: 448 KLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLG-HGNSSTQKYPKLIQG 506
Query: 162 AFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFL 221
++C VS G H A++E G L WG ++G+LG G + P ++K
Sbjct: 507 PLQGKVVVC-VSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDS-NSRNIPTLVK------ 558
Query: 222 DEAPELEKITQVSCGEYHSAAVSENGE-VYTWGLGSVGQLGHCSLQSGDKELL--PRRVV 278
++ + +VSCG H+ A+S++G V+++G G G+LGH GD + P+ +
Sbjct: 559 ----DISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGH-----GDTNRVYKPKVIE 609
Query: 279 ALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNI 338
AL G+FI+ V G S ALTS G +YAWG LG G + + +L P + I
Sbjct: 610 ALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGAC--LGCG-SSEATALRP-------KLI 659
Query: 339 PILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYA-WYPSPVDWCVG- 396
L V ++ G SH L D ++ WG NS GQ ST P V G
Sbjct: 660 EELAATRIVD-ISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGI 718
Query: 397 EVRKLAAGGGHS 408
+++++AG HS
Sbjct: 719 AIQQISAGTSHS 730
Score = 298 (110.0 bits), Expect = 1.9e-22, P = 1.9e-22
Identities = 79/255 (30%), Positives = 131/255 (51%)
Query: 68 ACGHE-HTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCT 126
+CG + H+ A+ G +F+WG ++G+LG G + ++ P +++ LQ E V +SCG +
Sbjct: 4082 SCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHS 4141
Query: 127 AAIAEPRE--NDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSE 184
A + + G RL + G P I QV+CG H +A+S
Sbjct: 4142 AVVTSDGKLFTFGNGDYGRLGL-GNTSNKKLPERVTAL--EGYQIGQVACGLNHTLAVSA 4198
Query: 185 CG-LLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAV 243
G ++ A+G +YG+LG G + K + +D + I +V+CG S A+
Sbjct: 4199 DGSMVWAFGDGDYGKLGLGNS--------TAKSSPQKVDVLCGIG-IKKVACGTQFSVAL 4249
Query: 244 SENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGA 303
+++G VYT+G + L ++ ++ P+++ L G+ I+DVA G H+ AL S G
Sbjct: 4250 TKDGHVYTFGQDRLIGLPEGRARNHNR---PQQIPVLAGVVIEDVAVGAEHTLALASTGD 4306
Query: 304 LYAWGGSQAGQLGLG 318
+YAWG + GQLGLG
Sbjct: 4307 VYAWGSNSEGQLGLG 4321
Score = 269 (99.8 bits), Expect = 3.5e-19, P = 3.5e-19
Identities = 100/332 (30%), Positives = 149/332 (44%)
Query: 1 MDINEIIGETARPVD-NIPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAG 59
MD + T+RP D ++ K +Y+WG GQ GR + +P P F
Sbjct: 3971 MDEQIMSWATSRPEDWHLGGKCDVYLWGAGRHGQLAEAGRN--VMVPAAAPS--F----- 4021
Query: 60 ANSRWLDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSI 119
S+ + CG T + ++GT+ G +G+LG G + + LQ V +
Sbjct: 4022 --SQAQQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQL 4079
Query: 120 --SCGA--HCTAAIAEPRE--NDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVS 173
SCG+ H + A+ E E + G +L G + PR A ++ Q+S
Sbjct: 4080 VTSCGSDGH-SMALTESGEVFSWGDGDYGKLG-HGNSDRQRRPRQI-EALQGEEVV-QMS 4135
Query: 174 CGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRV--IKGYAKFLDEAPELEKIT 231
CG H ++ G L +G +YG+LG G T RV ++GY +I
Sbjct: 4136 CGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGY-----------QIG 4184
Query: 232 QVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACG 291
QV+CG H+ AVS +G + W G G G L + + P++V L GI IK VACG
Sbjct: 4185 QVACGLNHTLAVSADGSM-VWAFGD-GDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACG 4242
Query: 292 GVHSCALTSKGALYAWGGSQAGQLGLGPQTRS 323
S ALT G +Y +G Q +GL P+ R+
Sbjct: 4243 TQFSVALTKDGHVYTFG--QDRLIGL-PEGRA 4271
Score = 268 (99.4 bits), Expect = 2.3e-17, Sum P(2) = 2.3e-17
Identities = 89/289 (30%), Positives = 132/289 (45%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ WG G+ G G + PK + L G + ++ G+ H+AAV DG
Sbjct: 479 VFSWGDGDYGKLGH-GNSSTQKYPKLIQGPLQGKVV------VCVSAGYRHSAAVTEDGE 531
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
L+TWG +FG+LG G R P VK + + V +SCG+ T A+++ DG
Sbjct: 532 LYTWGEGDFGRLGHGDSNSRNIPTLVKDISN--VGEVSCGSSHTIALSK----DGRT--- 582
Query: 143 RLWVWGQNQGSNFPRLFWG----AFTPNTI-------ICQVSCGSVHVVALSECGLLQAW 191
VW G N +L G + P I I +V GS +AL+ G + AW
Sbjct: 583 ---VWSFGGGDN-GKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAW 638
Query: 192 GYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYT 251
G LG G + P++I+ A +I +S G+ H A+S + EVY
Sbjct: 639 GCGAC--LGCGSSEATALRPKLIEELAA--------TRIVDISIGDSHCLALSHDNEVYA 688
Query: 252 WGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTS 300
WG S+GQ G + S P++V LDGI I+ ++ G HS A T+
Sbjct: 689 WGNNSMGQCGQGN--STGPITKPKKVSGLDGIAIQQISAGTSHSLAWTA 735
Score = 265 (98.3 bits), Expect = 9.6e-19, P = 9.6e-19
Identities = 83/262 (31%), Positives = 129/262 (49%)
Query: 74 TAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPR 133
T V+ ++ WG+N QL +GT+E P+ ++I G +CT I+
Sbjct: 365 TPIVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSFSD--AQTIEAGQYCTFVIS--- 419
Query: 134 ENDGTI------STSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSC--GSV-HVVALSE 184
DG++ S RL + N S +L F P+ I +VS GS H +A +
Sbjct: 420 -TDGSVRACGKGSYGRLGLGDSNNQSTLKKL---TFEPHRSIKKVSSSKGSDGHTLAFTT 475
Query: 185 CGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQ-VSCGEYHSAAV 243
G + +WG +YG+LG G + P++I+G P K+ VS G HSAAV
Sbjct: 476 EGEVFSWGDGDYGKLGHG-NSSTQKYPKLIQG--------PLQGKVVVCVSAGYRHSAAV 526
Query: 244 SENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKG- 302
+E+GE+YTWG G G+LGH S + +P V + + +V+CG H+ AL+ G
Sbjct: 527 TEDGELYTWGEGDFGRLGHGDSNSRN---IPTLVKDISNV--GEVSCGSSHTIALSKDGR 581
Query: 303 ALYAWGGSQAGQLGLGPQTRSF 324
++++GG G+LG G R +
Sbjct: 582 TVWSFGGGDNGKLGHGDTNRVY 603
Score = 258 (95.9 bits), Expect = 5.8e-18, P = 5.8e-18
Identities = 92/311 (29%), Positives = 145/311 (46%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ WG G+ G +RQ R P+Q+ L G + ++CG +H+A V SDG
Sbjct: 4098 VFSWGDGDYGKLGHGNSDRQRR-PRQIEA-LQG------EEVVQMSCGFKHSAVVTSDGK 4149
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
LFT+G ++G+LG G +K PE+V L+ + ++CG + T A++ DG S
Sbjct: 4150 LFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSA----DG----S 4201
Query: 143 RLWVWGQNQGSNFPRLFWGAFTPNT------IIC-----QVSCGSVHVVALSECGLLQAW 191
+W +G ++ +L G T + ++C +V+CG+ VAL++ G + +
Sbjct: 4202 MVWAFGDG---DYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTF 4258
Query: 192 GYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYT 251
G + L G P+ I A + I V+ G H+ A++ G+VY
Sbjct: 4259 GQDRLIGLPEG-RARNHNRPQQIPVLAGVV--------IEDVAVGAEHTLALASTGDVYA 4309
Query: 252 WGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGAL-YAWGGS 310
WG S GQLG L + P V L G ++ ++ G HS A T+ A G S
Sbjct: 4310 WGSNSEGQLG---LGHTNHVREPTLVTVLQGKNVRQISAGRCHSAAWTAPPVPPRAPGVS 4366
Query: 311 QAGQLGLGPQT 321
QLGL P T
Sbjct: 4367 VPLQLGL-PDT 4376
Score = 212 (79.7 bits), Expect = 1.2e-22, Sum P(2) = 1.2e-22
Identities = 67/184 (36%), Positives = 94/184 (51%)
Query: 229 KITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDV 288
+I QV+CG H+ AVS +G + W G G G L + + P++V L GI IK V
Sbjct: 4182 QIGQVACGLNHTLAVSADGSM-VWAFGD-GDYGKLGLGNSTAKSSPQKVDVLCGIGIKKV 4239
Query: 289 ACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQ 348
ACG S ALT G +Y +G Q +GL P+ R+ N + + IP+L GV
Sbjct: 4240 ACGTQFSVALTKDGHVYTFG--QDRLIGL-PEGRA----RNHNRP--QQIPVLA---GVV 4287
Query: 349 L--VACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGG 405
+ VA G HTL G ++ WG NS GQ + + P+ V G+ VR+++AG
Sbjct: 4288 IEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVREPTLVTVLQGKNVRQISAGR 4347
Query: 406 GHSA 409
HSA
Sbjct: 4348 CHSA 4351
Score = 184 (69.8 bits), Expect = 1.5e-19, Sum P(2) = 1.5e-19
Identities = 69/228 (30%), Positives = 100/228 (43%)
Query: 191 WGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVY 250
WG +GQL G V+ A AP + QV CG+ + + NG V
Sbjct: 3997 WGAGRHGQLAEA-------GRNVMVPAA-----APSFSQAQQVICGQNCTFVIQANGTVL 4044
Query: 251 TWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDV--ACGGV-HSCALTSKGALYAW 307
G GS G+LG + S D +L + AL G + + +CG HS ALT G +++W
Sbjct: 4045 ACGEGSYGRLGQGN--SDDLHVLTV-ISALQGFVVTQLVTSCGSDGHSMALTESGEVFSW 4101
Query: 308 GGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIH 367
G G+LG G R P R I L VQ+ +CG H+ V DG++
Sbjct: 4102 GDGDYGKLGHGNSDRQRR--P-------RQIEALQGEEVVQM-SCGFKHSAVVTSDGKLF 4151
Query: 368 GWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHS-AVLAD 413
+G YG+ ++ P V G ++ ++A G H+ AV AD
Sbjct: 4152 TFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSAD 4199
Score = 148 (57.2 bits), Expect = 1.2e-22, Sum P(2) = 1.2e-22
Identities = 49/185 (26%), Positives = 82/185 (44%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+YVWG N S Q +E K L P+L P+ ++++ ++ G T +++DG+
Sbjct: 374 VYVWGSNSSHQLVEGTQE------KILQPKL--APSFSDAQTIE--AGQYCTFVISTDGS 423
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCG----AHCTAAIAEPREND-G 137
+ G +G+LG G + +K+ +K +S H A E G
Sbjct: 424 VRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWG 483
Query: 138 TISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYG 197
+L G + +P+L G ++C VS G H A++E G L WG ++G
Sbjct: 484 DGDYGKLG-HGNSSTQKYPKLIQGPLQGKVVVC-VSAGYRHSAAVTEDGELYTWGEGDFG 541
Query: 198 QLGRG 202
+LG G
Sbjct: 542 RLGHG 546
Score = 50 (22.7 bits), Expect = 0.00022, Sum P(3) = 0.00022
Identities = 17/50 (34%), Positives = 23/50 (46%)
Query: 221 LDEAPELEKITQVSCG-EYHSAAVSENGEVYTWGLGSVGQ-LGHCSLQSG 268
L+E E I +VS E + ENG++ T G G G L + SG
Sbjct: 2018 LEEEDENLPIQEVSFDPEKAQCCIVENGQILTHGSGGKGYGLASTGVTSG 2067
Score = 37 (18.1 bits), Expect = 2.3e-17, Sum P(2) = 2.3e-17
Identities = 12/41 (29%), Positives = 16/41 (39%)
Query: 287 DVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLI 327
D+ V + A +G AW G L +G S LI
Sbjct: 3517 DIQPHWVSALAWPEEGPSTAWSGESPELLLVGRMDGSLGLI 3557
>UNIPROTKB|F1S098 [details] [associations]
symbol:HERC1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005622 "intracellular" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] Pfam:PF00632
InterPro:IPR017986 InterPro:IPR000569 InterPro:IPR001680
InterPro:IPR003877 InterPro:IPR015943 Pfam:PF00400 Pfam:PF00622
PROSITE:PS50082 PROSITE:PS50237 PROSITE:PS50294 SMART:SM00119
SMART:SM00320 INTERPRO:IPR000408 Pfam:PF00415 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0016567
GO:GO:0005622 InterPro:IPR008985 SUPFAM:SSF49899 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 InterPro:IPR001870
InterPro:IPR018355 SMART:SM00449 PROSITE:PS50188 SUPFAM:SSF56204
CTD:8925 KO:K10594 OMA:HHYQDGI GeneTree:ENSGT00700000104312
EMBL:CU550694 EMBL:CU582937 RefSeq:XP_001927286.4 UniGene:Ssc.96208
UniGene:Ssc.97542 Ensembl:ENSSSCT00000005038 GeneID:100153537
KEGG:ssc:100153537 Uniprot:F1S098
Length = 4859
Score = 313 (115.2 bits), Expect = 3.5e-24, P = 3.5e-24
Identities = 106/372 (28%), Positives = 171/372 (45%)
Query: 47 KQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPE 106
K L P+L P+ ++++ ++ G T +++DG++ G +G+LG G + +
Sbjct: 392 KILQPKL--APSFSDAQTIE--AGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLK 447
Query: 107 KVKQLQSEFVKSISCG----AHCTAAIAEPREND-GTISTSRLWVWGQNQGSNFPRLFWG 161
K+ +K +S H A E G +L G + +P+L G
Sbjct: 448 KLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLG-HGNSSTQKYPKLIQG 506
Query: 162 AFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFL 221
++C VS G H A++E G L WG ++G+LG G + P ++K
Sbjct: 507 PLQGKVVVC-VSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDS-NSRNIPTLVK------ 558
Query: 222 DEAPELEKITQVSCGEYHSAAVSENGE-VYTWGLGSVGQLGHCSLQSGDKELL--PRRVV 278
++ + +VSCG H+ A+S++G V+++G G G+LGH GD + P+ +
Sbjct: 559 ----DISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGH-----GDTNRVYKPKVIE 609
Query: 279 ALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNI 338
AL G+FI+ V G S ALTS G +YAWG LG G + + +L P + I
Sbjct: 610 ALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGAC--LGCG-SSEATALRP-------KLI 659
Query: 339 PILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYA-WYPSPVDWCVG- 396
L V ++ G SH L D ++ WG NS GQ ST P V G
Sbjct: 660 EELAATRIVD-ISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGI 718
Query: 397 EVRKLAAGGGHS 408
+++++AG HS
Sbjct: 719 AIQQISAGTSHS 730
Score = 298 (110.0 bits), Expect = 1.9e-22, P = 1.9e-22
Identities = 79/255 (30%), Positives = 131/255 (51%)
Query: 68 ACGHE-HTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCT 126
+CG + H+ A+ G +F+WG ++G+LG G + ++ P +++ LQ E V +SCG +
Sbjct: 4085 SCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHS 4144
Query: 127 AAIAEPRE--NDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSE 184
A + + G RL + G P I QV+CG H +A+S
Sbjct: 4145 AVVTSDGKLFTFGNGDYGRLGL-GNTSNKKLPERVTAL--EGYQIGQVACGLNHTLAVSA 4201
Query: 185 CG-LLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAV 243
G ++ A+G +YG+LG G + K + +D + I +V+CG S A+
Sbjct: 4202 DGSMVWAFGDGDYGKLGLGNS--------TAKSSPQKVDVLCGIG-IKKVACGTQFSVAL 4252
Query: 244 SENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGA 303
+++G VYT+G + L ++ ++ P+++ L G+ I+DVA G H+ AL S G
Sbjct: 4253 TKDGHVYTFGQDRLIGLPEGRARNHNR---PQQIPVLAGVVIEDVAVGAEHTLALASTGD 4309
Query: 304 LYAWGGSQAGQLGLG 318
+YAWG + GQLGLG
Sbjct: 4310 VYAWGSNSEGQLGLG 4324
Score = 269 (99.8 bits), Expect = 3.5e-19, P = 3.5e-19
Identities = 100/332 (30%), Positives = 149/332 (44%)
Query: 1 MDINEIIGETARPVD-NIPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAG 59
MD + T+RP D ++ K +Y+WG GQ GR + +P P F
Sbjct: 3974 MDEQIMSWATSRPEDWHLGGKCDVYLWGAGRHGQLAEAGRN--VMVPAAAPS--F----- 4024
Query: 60 ANSRWLDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSI 119
S+ + CG T + ++GT+ G +G+LG G + + LQ V +
Sbjct: 4025 --SQAQQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQL 4082
Query: 120 --SCGA--HCTAAIAEPRE--NDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVS 173
SCG+ H + A+ E E + G +L G + PR A ++ Q+S
Sbjct: 4083 VTSCGSDGH-SMALTESGEVFSWGDGDYGKLG-HGNSDRQRRPRQI-EALQGEEVV-QMS 4138
Query: 174 CGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRV--IKGYAKFLDEAPELEKIT 231
CG H ++ G L +G +YG+LG G T RV ++GY +I
Sbjct: 4139 CGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGY-----------QIG 4187
Query: 232 QVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACG 291
QV+CG H+ AVS +G + W G G G L + + P++V L GI IK VACG
Sbjct: 4188 QVACGLNHTLAVSADGSM-VWAFGD-GDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACG 4245
Query: 292 GVHSCALTSKGALYAWGGSQAGQLGLGPQTRS 323
S ALT G +Y +G Q +GL P+ R+
Sbjct: 4246 TQFSVALTKDGHVYTFG--QDRLIGL-PEGRA 4274
Score = 268 (99.4 bits), Expect = 2.3e-17, Sum P(2) = 2.3e-17
Identities = 89/289 (30%), Positives = 132/289 (45%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ WG G+ G G + PK + L G + ++ G+ H+AAV DG
Sbjct: 479 VFSWGDGDYGKLGH-GNSSTQKYPKLIQGPLQGKVV------VCVSAGYRHSAAVTEDGE 531
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
L+TWG +FG+LG G R P VK + + V +SCG+ T A+++ DG
Sbjct: 532 LYTWGEGDFGRLGHGDSNSRNIPTLVKDISN--VGEVSCGSSHTIALSK----DGRT--- 582
Query: 143 RLWVWGQNQGSNFPRLFWG----AFTPNTI-------ICQVSCGSVHVVALSECGLLQAW 191
VW G N +L G + P I I +V GS +AL+ G + AW
Sbjct: 583 ---VWSFGGGDN-GKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAW 638
Query: 192 GYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYT 251
G LG G + P++I+ A +I +S G+ H A+S + EVY
Sbjct: 639 GCGAC--LGCGSSEATALRPKLIEELAA--------TRIVDISIGDSHCLALSHDNEVYA 688
Query: 252 WGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTS 300
WG S+GQ G + S P++V LDGI I+ ++ G HS A T+
Sbjct: 689 WGNNSMGQCGQGN--STGPITKPKKVSGLDGIAIQQISAGTSHSLAWTA 735
Score = 262 (97.3 bits), Expect = 2.1e-18, P = 2.1e-18
Identities = 81/253 (32%), Positives = 126/253 (49%)
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTI--- 139
++ WG+N QL +GT+E P+ ++I G +CT I+ DG++
Sbjct: 374 VYVWGSNSSHQLVEGTQEKILQPKLAPSFSD--AQTIEAGQYCTFVIS----TDGSVRAC 427
Query: 140 ---STSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSC--GSV-HVVALSECGLLQAWGY 193
S RL + N S +L F P+ I +VS GS H +A + G + +WG
Sbjct: 428 GKGSYGRLGLGDSNNQSTLKKL---TFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGD 484
Query: 194 NEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQ-VSCGEYHSAAVSENGEVYTW 252
+YG+LG G + P++I+G P K+ VS G HSAAV+E+GE+YTW
Sbjct: 485 GDYGKLGHG-NSSTQKYPKLIQG--------PLQGKVVVCVSAGYRHSAAVTEDGELYTW 535
Query: 253 GLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKG-ALYAWGGSQ 311
G G G+LGH S + +P V + + +V+CG H+ AL+ G ++++GG
Sbjct: 536 GEGDFGRLGHGDSNSRN---IPTLVKDISNV--GEVSCGSSHTIALSKDGRTVWSFGGGD 590
Query: 312 AGQLGLGPQTRSF 324
G+LG G R +
Sbjct: 591 NGKLGHGDTNRVY 603
Score = 255 (94.8 bits), Expect = 1.2e-17, P = 1.2e-17
Identities = 90/307 (29%), Positives = 143/307 (46%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ WG G+ G +RQ R P+Q+ L G + ++CG +H+A V SDG
Sbjct: 4101 VFSWGDGDYGKLGHGNSDRQRR-PRQIEA-LQG------EEVVQMSCGFKHSAVVTSDGK 4152
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
LFT+G ++G+LG G +K PE+V L+ + ++CG + T A++ DG S
Sbjct: 4153 LFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSA----DG----S 4204
Query: 143 RLWVWGQNQGSNFPRLFWGAFTPNT------IIC-----QVSCGSVHVVALSECGLLQAW 191
+W +G ++ +L G T + ++C +V+CG+ VAL++ G + +
Sbjct: 4205 MVWAFGDG---DYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTF 4261
Query: 192 GYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYT 251
G + L G P+ I A + I V+ G H+ A++ G+VY
Sbjct: 4262 GQDRLIGLPEG-RARNHNRPQQIPVLAGVV--------IEDVAVGAEHTLALASTGDVYA 4312
Query: 252 WGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGAL-YAWGGS 310
WG S GQLG L + P V L G ++ ++ G HS A T+ A G S
Sbjct: 4313 WGSNSEGQLG---LGHTNHVREPTLVTVLQGKNVRQISAGRCHSAAWTAPPVPPRAPGVS 4369
Query: 311 QAGQLGL 317
QLGL
Sbjct: 4370 VPLQLGL 4376
Score = 235 (87.8 bits), Expect = 2.0e-15, P = 2.0e-15
Identities = 78/281 (27%), Positives = 123/281 (43%)
Query: 141 TSRLWVWGQNQGSNF-----PRLFWGAFTPNTIICQ-VSCGSVHVVALSECGLLQAWGYN 194
T ++VWG N ++ P+ Q + G +S G ++A G
Sbjct: 371 TCEVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQTIEAGQYCTFVISTDGSVRACGKG 430
Query: 195 EYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGL 254
YG+LG G + +K + ++K++ + H+ A + GEV++WG
Sbjct: 431 SYGRLGLGDS----NNQSTLKKLT--FEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGD 484
Query: 255 GSVGQLGHCSLQSGDKELLPRRVVA-LDGIFIKDVACGGVHSCALTSKGALYAWGGSQAG 313
G G+LGH + S K P+ + L G + V+ G HS A+T G LY WG G
Sbjct: 485 GDYGKLGHGN-SSTQK--YPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFG 541
Query: 314 QLGLGPQTRSFSLIPNESDTYFRNIPILVVP-NGVQLVACGHSHTLVYMRDGR-IHGWGY 371
+LG G D+ RNIP LV + V V+CG SHT+ +DGR + +G
Sbjct: 542 RLGHG-------------DSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGG 588
Query: 372 NSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVL 411
G+ + + + P ++ G +RK+ AG S L
Sbjct: 589 GDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLAL 629
Score = 212 (79.7 bits), Expect = 1.2e-22, Sum P(2) = 1.2e-22
Identities = 67/184 (36%), Positives = 94/184 (51%)
Query: 229 KITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDV 288
+I QV+CG H+ AVS +G + W G G G L + + P++V L GI IK V
Sbjct: 4185 QIGQVACGLNHTLAVSADGSM-VWAFGD-GDYGKLGLGNSTAKSSPQKVDVLCGIGIKKV 4242
Query: 289 ACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQ 348
ACG S ALT G +Y +G Q +GL P+ R+ N + + IP+L GV
Sbjct: 4243 ACGTQFSVALTKDGHVYTFG--QDRLIGL-PEGRA----RNHNRP--QQIPVLA---GVV 4290
Query: 349 L--VACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGG 405
+ VA G HTL G ++ WG NS GQ + + P+ V G+ VR+++AG
Sbjct: 4291 IEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVREPTLVTVLQGKNVRQISAGR 4350
Query: 406 GHSA 409
HSA
Sbjct: 4351 CHSA 4354
Score = 184 (69.8 bits), Expect = 1.5e-19, Sum P(2) = 1.5e-19
Identities = 69/228 (30%), Positives = 100/228 (43%)
Query: 191 WGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVY 250
WG +GQL G V+ A AP + QV CG+ + + NG V
Sbjct: 4000 WGAGRHGQLAEA-------GRNVMVPAA-----APSFSQAQQVICGQNCTFVIQANGTVL 4047
Query: 251 TWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDV--ACGGV-HSCALTSKGALYAW 307
G GS G+LG + S D +L + AL G + + +CG HS ALT G +++W
Sbjct: 4048 ACGEGSYGRLGQGN--SDDLHVLTV-ISALQGFVVTQLVTSCGSDGHSMALTESGEVFSW 4104
Query: 308 GGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIH 367
G G+LG G R P R I L VQ+ +CG H+ V DG++
Sbjct: 4105 GDGDYGKLGHGNSDRQRR--P-------RQIEALQGEEVVQM-SCGFKHSAVVTSDGKLF 4154
Query: 368 GWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHS-AVLAD 413
+G YG+ ++ P V G ++ ++A G H+ AV AD
Sbjct: 4155 TFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSAD 4202
Score = 148 (57.2 bits), Expect = 1.2e-22, Sum P(2) = 1.2e-22
Identities = 49/185 (26%), Positives = 82/185 (44%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+YVWG N S Q +E K L P+L P+ ++++ ++ G T +++DG+
Sbjct: 374 VYVWGSNSSHQLVEGTQE------KILQPKL--APSFSDAQTIE--AGQYCTFVISTDGS 423
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCG----AHCTAAIAEPREND-G 137
+ G +G+LG G + +K+ +K +S H A E G
Sbjct: 424 VRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWG 483
Query: 138 TISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYG 197
+L G + +P+L G ++C VS G H A++E G L WG ++G
Sbjct: 484 DGDYGKLG-HGNSSTQKYPKLIQGPLQGKVVVC-VSAGYRHSAAVTEDGELYTWGEGDFG 541
Query: 198 QLGRG 202
+LG G
Sbjct: 542 RLGHG 546
Score = 50 (22.7 bits), Expect = 0.00022, Sum P(3) = 0.00022
Identities = 17/50 (34%), Positives = 23/50 (46%)
Query: 221 LDEAPELEKITQVSCG-EYHSAAVSENGEVYTWGLGSVGQ-LGHCSLQSG 268
L+E E I +VS E + ENG++ T G G G L + SG
Sbjct: 2019 LEEEDENLPIQEVSFDPEKAQCCIVENGQILTHGSGGKGYGLASTGVTSG 2068
Score = 37 (18.1 bits), Expect = 2.3e-17, Sum P(2) = 2.3e-17
Identities = 12/41 (29%), Positives = 16/41 (39%)
Query: 287 DVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLI 327
D+ V + A +G AW G L +G S LI
Sbjct: 3520 DIQPHWVSALAWPEEGPSTAWSGESPELLLVGRMDGSLGLI 3560
>UNIPROTKB|Q9N1T2 [details] [associations]
symbol:RPGR "X-linked retinitis pigmentosa GTPase
regulator" species:9615 "Canis lupus familiaris" [GO:0036126 "sperm
flagellum" evidence=ISS] [GO:0036064 "cilium basal body"
evidence=ISS] [GO:0042073 "intraflagellar transport" evidence=ISS]
[GO:0042384 "cilium assembly" evidence=ISS] [GO:0005813
"centrosome" evidence=ISS] [GO:0007601 "visual perception"
evidence=ISS] [GO:0005794 "Golgi apparatus" evidence=ISS]
[GO:0035085 "cilium axoneme" evidence=IEA] [GO:0050896 "response to
stimulus" evidence=IEA] [GO:0005085 "guanyl-nucleotide exchange
factor activity" evidence=IEA] INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005794 GO:GO:0005813 GO:GO:0007601 GO:GO:0050896
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0005085
GO:GO:0042384 PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626
PROSITE:PS50012 GO:GO:0042073 eggNOG:COG5184 GO:GO:0036064
GO:GO:0036126 EMBL:AF148798 EMBL:AF148799 EMBL:AF148800
EMBL:AF148801 RefSeq:NP_001003126.1 UniGene:Cfa.3592
ProteinModelPortal:Q9N1T2 STRING:Q9N1T2 GeneID:403726
KEGG:cfa:403726 CTD:6103 HOGENOM:HOG000231314 HOVERGEN:HBG026899
InParanoid:Q9N1T2 NextBio:20817229 Uniprot:Q9N1T2
Length = 1003
Score = 305 (112.4 bits), Expect = 3.9e-24, P = 3.9e-24
Identities = 101/305 (33%), Positives = 148/305 (48%)
Query: 67 IACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCT 126
++CG EHTA V + L+ +G+N +GQLG G++ P VK L+ E VK +CG + T
Sbjct: 40 LSCGDEHTAVVTGNNKLYMFGSNNWGQLGLGSKSTVSKPTCVKALKPEKVKFAACGRNHT 99
Query: 127 AAIAEPRE--NDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSE 184
E + G + +L + + S F + + FT I Q+S GS AL+E
Sbjct: 100 LVSTEGGKVYAAGGNNEGQLGLGDTEERSTFHLISF--FTSQRKIKQLSAGSNTSAALTE 157
Query: 185 CGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVS 244
G L WG N GQ+G +V G + I+ +SCG YHSA V+
Sbjct: 158 DGELFMWGDNSEGQIGLENVTNVCVPQQVTVG-----------KPISWISCGYYHSAFVT 206
Query: 245 ENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGAL 304
G++YT+G G+LG + Q +P+ V + G ++ VACGG H+ LT K A+
Sbjct: 207 TEGQLYTFGEPECGKLGLPN-QLLVNHRMPQPVPGIPGKVVQ-VACGGGHTVVLTEK-AV 263
Query: 305 YAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVY-MRD 363
Y +G Q GQLGLG T F ++ + ++ I + G A L+Y D
Sbjct: 264 YTFGLGQFGQLGLG--TFLFETSVPKAIEHIKDQKISFIACGENHTALITDMGLMYTFGD 321
Query: 364 GRIHG 368
GR HG
Sbjct: 322 GR-HG 325
Score = 283 (104.7 bits), Expect = 1.3e-21, P = 1.3e-21
Identities = 90/301 (29%), Positives = 136/301 (45%)
Query: 68 ACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEF-VKSISCGAHCT 126
ACG HT G ++ G N GQLG G E R + S+ +K +S G++ +
Sbjct: 93 ACGRNHTLVSTEGGKVYAAGGNNEGQLGLGDTEERSTFHLISFFTSQRKIKQLSAGSNTS 152
Query: 127 AAIAEPRENDGTISTSRLWVWGQN-QGSNFPRLFWGAFTPNTI-----ICQVSCGSVHVV 180
AA+ E DG L++WG N +G P + I +SCG H
Sbjct: 153 AALTE----DG-----ELFMWGDNSEGQIGLENVTNVCVPQQVTVGKPISWISCGYYHSA 203
Query: 181 ALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELE-KITQVSCGEYH 239
++ G L +G E G+LG P + + P + K+ QV+CG H
Sbjct: 204 FVTTEGQLYTFGEPECGKLGL---------PNQLLVNHRMPQPVPGIPGKVVQVACGGGH 254
Query: 240 SAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALT 299
+ ++E VYT+GLG GQLG + + +P+ + + I +ACG H+ +T
Sbjct: 255 TVVLTEKA-VYTFGLGQFGQLGLGTFLF--ETSVPKAIEHIKDQKISFIACGENHTALIT 311
Query: 300 SKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLV 359
G +Y +G + G+LGLG + + IP + R I VQLV+CG HTLV
Sbjct: 312 DMGLMYTFGDGRHGKLGLGLENSTNQFIPTLCSNFLRFI--------VQLVSCGGCHTLV 363
Query: 360 Y 360
+
Sbjct: 364 F 364
Score = 208 (78.3 bits), Expect = 3.9e-15, Sum P(2) = 3.9e-15
Identities = 78/243 (32%), Positives = 123/243 (50%)
Query: 230 ITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVA 289
I+ +SCG YHSA V+ G++YT+G G+LG + Q +P+ V + G ++ VA
Sbjct: 192 ISWISCGYYHSAFVTTEGQLYTFGEPECGKLGLPN-QLLVNHRMPQPVPGIPGKVVQ-VA 249
Query: 290 CGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQL 349
CGG H+ LT K A+Y +G Q GQLGLG T F ++ + ++ +
Sbjct: 250 CGGGHTVVLTEK-AVYTFGLGQFGQLGLG--TFLFETSVPKAIEHIKD-------QKISF 299
Query: 350 VACGHSHTLVYMRDGRIHGWGYNSYGQAAN--EKSTYAWYPSPV-DWCVGEVRKLAAGGG 406
+ACG +HT + G ++ +G +G+ E ST + P+ ++ V+ ++ GG
Sbjct: 300 IACGENHTALITDMGLMYTFGDGRHGKLGLGLENSTNQFIPTLCSNFLRFIVQLVSCGGC 359
Query: 407 HSAVLA-------DACSLKELCE--FRLAESVTLSNASEIEDVASRTGSEALARLCERLR 457
H+ V A + LKE+ + F A S++LSN S V +T S AR+ R R
Sbjct: 360 HTLVFATPRLGGTEEMELKEINKSCFSAATSLSLSNLSS-GIVLHQTLS---ARVRRRER 415
Query: 458 EHS 460
E S
Sbjct: 416 EKS 418
Score = 194 (73.4 bits), Expect = 9.7e-12, P = 9.7e-12
Identities = 59/180 (32%), Positives = 84/180 (46%)
Query: 231 TQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVAC 290
T +SCG+ H+A V+ N ++Y +G + GQLG S + K P V AL +K AC
Sbjct: 38 TFLSCGDEHTAVVTGNNKLYMFGSNNWGQLGLGSKSTVSK---PTCVKALKPEKVKFAAC 94
Query: 291 GGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLV 350
G H+ T G +YA GG+ GQLGLG E + F I ++ +
Sbjct: 95 GRNHTLVSTEGGKVYAAGGNNEGQLGLGD---------TEERSTFHLISFFTSQRKIKQL 145
Query: 351 ACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSA 409
+ G + + DG + WG NS GQ E T P V VG+ + ++ G HSA
Sbjct: 146 SAGSNTSAALTEDGELFMWGDNSEGQIGLENVTNVCVPQQVT--VGKPISWISCGYYHSA 203
Score = 187 (70.9 bits), Expect = 5.6e-11, P = 5.6e-11
Identities = 57/193 (29%), Positives = 88/193 (45%)
Query: 228 EKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIF--- 284
EK+ +CG H+ +E G+VY G + GQLG GD E R L F
Sbjct: 87 EKVKFAACGRNHTLVSTEGGKVYAAGGNNEGQLG-----LGDTE--ERSTFHLISFFTSQ 139
Query: 285 --IKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILV 342
IK ++ G S ALT G L+ WG + GQ+GL T +P + +
Sbjct: 140 RKIKQLSAGSNTSAALTEDGELFMWGDNSEGQIGLENVTNV--CVPQQ----------VT 187
Query: 343 VPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAA--NEKSTYAWYPSPVDWCVGEVRK 400
V + ++CG+ H+ +G+++ +G G+ N+ P PV G+V +
Sbjct: 188 VGKPISWISCGYYHSAFVTTEGQLYTFGEPECGKLGLPNQLLVNHRMPQPVPGIPGKVVQ 247
Query: 401 LAAGGGHSAVLAD 413
+A GGGH+ VL +
Sbjct: 248 VACGGGHTVVLTE 260
Score = 181 (68.8 bits), Expect = 2.6e-10, P = 2.6e-10
Identities = 58/180 (32%), Positives = 83/180 (46%)
Query: 144 LWVWGQNQ-GSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRG 202
++ +G+ Q N P FW F N + +SCG H ++ L +G N +GQLG G
Sbjct: 14 VFTFGKTQFAENIPSKFW--FR-NDVPTFLSCGDEHTAVVTGNNKLYMFGSNNWGQLGLG 70
Query: 203 ITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGH 262
+ + P +K A + EK+ +CG H+ +E G+VY G + GQLG
Sbjct: 71 -SKSTVSKPTCVK--------ALKPEKVKFAACGRNHTLVSTEGGKVYAAGGNNEGQLG- 120
Query: 263 CSLQSGDKELLPRRVVALDGIF-----IKDVACGGVHSCALTSKGALYAWGGSQAGQLGL 317
GD E R L F IK ++ G S ALT G L+ WG + GQ+GL
Sbjct: 121 ----LGDTE--ERSTFHLISFFTSQRKIKQLSAGSNTSAALTEDGELFMWGDNSEGQIGL 174
Score = 150 (57.9 bits), Expect = 6.1e-07, P = 6.1e-07
Identities = 53/208 (25%), Positives = 97/208 (46%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+++WG N GQ G + + +P+Q+ G P W I+CG+ H+A V ++G
Sbjct: 161 LFMWGDNSEGQIGLEN-VTNVCVPQQVT---VGKPIS----W--ISCGYYHSAFVTTEGQ 210
Query: 83 LFTWGANEFGQLGDGTEEGRKH--PEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIS 140
L+T+G E G+LG + H P+ V + + V+ ++CG T + E +
Sbjct: 211 LYTFGEPECGKLGLPNQLLVNHRMPQPVPGIPGKVVQ-VACGGGHTVVLTEK-----AVY 264
Query: 141 TSRLWVWGQ-NQGS-----NFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYN 194
T L +GQ G+ + P+ + I ++CG H +++ GL+ +G
Sbjct: 265 TFGLGQFGQLGLGTFLFETSVPKAI--EHIKDQKISFIACGENHTALITDMGLMYTFGDG 322
Query: 195 EYGQLGRGITCEGLQG-PRVIKGYAKFL 221
+G+LG G+ Q P + + +F+
Sbjct: 323 RHGKLGLGLENSTNQFIPTLCSNFLRFI 350
Score = 133 (51.9 bits), Expect = 4.3e-05, P = 4.3e-05
Identities = 42/170 (24%), Positives = 78/170 (45%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
+ + +Y +G + G+ G QL + ++P + G P + + +ACG HT
Sbjct: 205 VTTEGQLYTFG---EPECGKLGLPNQLLVNHRMPQPVPGIPG----KVVQVACGGGHTV- 256
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKH-PEKVKQLQSEFVKSISCGAHCTAAIAEP--R 133
V ++ ++T+G +FGQLG GT P+ ++ ++ + + I+CG + TA I +
Sbjct: 257 VLTEKAVYTFGLGQFGQLGLGTFLFETSVPKAIEHIKDQKISFIACGENHTALITDMGLM 316
Query: 134 ENDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALS 183
G +L + +N + F F I+ VSCG H + +
Sbjct: 317 YTFGDGRHGKLGLGLENSTNQFIPTLCSNFL-RFIVQLVSCGGCHTLVFA 365
Score = 130 (50.8 bits), Expect = 9.2e-05, P = 9.2e-05
Identities = 40/133 (30%), Positives = 66/133 (49%)
Query: 288 VACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGV 347
++CG H+ +T LY +G + GQLGLG S S + T + + P V
Sbjct: 40 LSCGDEHTAVVTGNNKLYMFGSNNWGQLGLG----SKSTV--SKPTCVKALK----PEKV 89
Query: 348 QLVACGHSHTLVYMRDGRIHGWGYNSYGQAA----NEKSTY---AWYPSPVDWCVGEVRK 400
+ ACG +HTLV G+++ G N+ GQ E+ST+ +++ S ++++
Sbjct: 90 KFAACGRNHTLVSTEGGKVYAAGGNNEGQLGLGDTEERSTFHLISFFTSQ-----RKIKQ 144
Query: 401 LAAGGGHSAVLAD 413
L+AG SA L +
Sbjct: 145 LSAGSNTSAALTE 157
Score = 65 (27.9 bits), Expect = 3.9e-15, Sum P(2) = 3.9e-15
Identities = 34/137 (24%), Positives = 56/137 (40%)
Query: 72 EHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAE 131
E + G +FT+G +F + P K +++ +SCG TA +
Sbjct: 3 EPEEVMPGSGAVFTFGKTQFAE---------NIPSKF-WFRNDVPTFLSCGDEHTAVVTG 52
Query: 132 PRE--NDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQ 189
+ G+ + +L + ++ S P A P + +CG H + +E G +
Sbjct: 53 NNKLYMFGSNNWGQLGLGSKSTVSK-PTCV-KALKPEKVKF-AACGRNHTLVSTEGGKVY 109
Query: 190 AWGYNEYGQLGRGITCE 206
A G N GQLG G T E
Sbjct: 110 AAGGNNEGQLGLGDTEE 126
>UNIPROTKB|E2QYQ5 [details] [associations]
symbol:HERC1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005622 "intracellular" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
Pfam:PF00632 InterPro:IPR017986 InterPro:IPR000569
InterPro:IPR001680 InterPro:IPR003877 InterPro:IPR015943
Pfam:PF00400 Pfam:PF00622 PROSITE:PS50082 PROSITE:PS50237
PROSITE:PS50294 SMART:SM00119 SMART:SM00320 INTERPRO:IPR000408
Pfam:PF00415 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016567 GO:GO:0005622 InterPro:IPR008985
SUPFAM:SSF49899 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 InterPro:IPR001870 InterPro:IPR018355 SMART:SM00449
PROSITE:PS50188 SUPFAM:SSF56204 OMA:HHYQDGI
GeneTree:ENSGT00700000104312 EMBL:AAEX03016202
Ensembl:ENSCAFT00000026962 Uniprot:E2QYQ5
Length = 4863
Score = 311 (114.5 bits), Expect = 6.0e-24, P = 6.0e-24
Identities = 103/353 (29%), Positives = 163/353 (46%)
Query: 67 IACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCG---- 122
I G T +++DG++ G +G+LG G + +K+ +K +S
Sbjct: 408 IEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSD 467
Query: 123 AHCTAAIAEPREND-GTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVA 181
H A E G +L G + +P+L G ++C VS G H A
Sbjct: 468 GHTLAFTTEGEVFSWGDGDYGKLG-HGNSSTQKYPKLIQGPLQGKVVVC-VSAGYRHSAA 525
Query: 182 LSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSA 241
++E G L WG ++G+LG G + P ++K ++ + +VSCG H+
Sbjct: 526 VTEDGELYTWGEGDFGRLGHGDS-NSRNIPTLVK----------DISNVGEVSCGSSHTI 574
Query: 242 AVSENGE-VYTWGLG-SVGQLGHCSLQSGDKELL--PRRVVALDGIFIKDVACGGVHSCA 297
A+S++G V+++G G +VG+LGH GD + P+ V AL G+FI+ V G S A
Sbjct: 575 ALSKDGRTVWSFGGGDNVGKLGH-----GDTNRVYKPKVVEALQGMFIRKVCAGSQSSLA 629
Query: 298 LTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHT 357
LTS G +YAWG LG G + + +L P + I L V ++ G SH
Sbjct: 630 LTSTGQVYAWGCGAC--LGCG-SSEATALRP-------KLIEELAATRIVD-ISIGDSHV 678
Query: 358 LVYMRDGRIHGWGYNSYGQAANEKSTYA-WYPSPVDWCVG-EVRKLAAGGGHS 408
+++ D ++ WG NS GQ ST P V G +++++AG HS
Sbjct: 679 WLFVMDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGTSHS 731
Score = 298 (110.0 bits), Expect = 1.9e-22, P = 1.9e-22
Identities = 79/255 (30%), Positives = 131/255 (51%)
Query: 68 ACGHE-HTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCT 126
+CG + H+ A+ G +F+WG ++G+LG G + ++ P +++ LQ E V +SCG +
Sbjct: 4088 SCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHS 4147
Query: 127 AAIAEPRE--NDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSE 184
A + + G RL + G P I QV+CG H +A+S
Sbjct: 4148 AVVTSDGKLFTFGNGDYGRLGL-GNTSNKKLPERVTAL--EGYQIGQVACGLNHTLAVSA 4204
Query: 185 CG-LLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAV 243
G ++ A+G +YG+LG G + K + +D + I +V+CG S A+
Sbjct: 4205 DGSMVWAFGDGDYGKLGLGNS--------TAKSSPQKVDVLCGIG-IKKVACGTQFSVAL 4255
Query: 244 SENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGA 303
+++G VYT+G + L ++ ++ P+++ L G+ I+DVA G H+ AL S G
Sbjct: 4256 TKDGHVYTFGQDRLIGLPEGRARNHNR---PQQIPVLAGVVIEDVAVGAEHTLALASTGD 4312
Query: 304 LYAWGGSQAGQLGLG 318
+YAWG + GQLGLG
Sbjct: 4313 VYAWGSNSEGQLGLG 4327
Score = 269 (99.8 bits), Expect = 3.5e-19, P = 3.5e-19
Identities = 100/332 (30%), Positives = 149/332 (44%)
Query: 1 MDINEIIGETARPVD-NIPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAG 59
MD + T+RP D ++ K +Y+WG GQ GR + +P P F
Sbjct: 3977 MDEQIMSWATSRPEDWHLGGKCDVYLWGAGRHGQLAEAGRN--VMVPAAAPS--F----- 4027
Query: 60 ANSRWLDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSI 119
S+ + CG T + ++GT+ G +G+LG G + + LQ V +
Sbjct: 4028 --SQAQQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQL 4085
Query: 120 --SCGA--HCTAAIAEPRE--NDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVS 173
SCG+ H + A+ E E + G +L G + PR A ++ Q+S
Sbjct: 4086 VTSCGSDGH-SMALTESGEVFSWGDGDYGKLG-HGNSDRQRRPRQI-EALQGEEVV-QMS 4141
Query: 174 CGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRV--IKGYAKFLDEAPELEKIT 231
CG H ++ G L +G +YG+LG G T RV ++GY +I
Sbjct: 4142 CGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGY-----------QIG 4190
Query: 232 QVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACG 291
QV+CG H+ AVS +G + W G G G L + + P++V L GI IK VACG
Sbjct: 4191 QVACGLNHTLAVSADGSM-VWAFGD-GDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACG 4248
Query: 292 GVHSCALTSKGALYAWGGSQAGQLGLGPQTRS 323
S ALT G +Y +G Q +GL P+ R+
Sbjct: 4249 TQFSVALTKDGHVYTFG--QDRLIGL-PEGRA 4277
Score = 257 (95.5 bits), Expect = 3.2e-16, Sum P(2) = 3.2e-16
Identities = 86/289 (29%), Positives = 129/289 (44%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ WG G+ G G + PK + L G + ++ G+ H+AAV DG
Sbjct: 479 VFSWGDGDYGKLGH-GNSSTQKYPKLIQGPLQGKVV------VCVSAGYRHSAAVTEDGE 531
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
L+TWG +FG+LG G R P VK + + V +SCG+ T A+++ DG
Sbjct: 532 LYTWGEGDFGRLGHGDSNSRNIPTLVKDISN--VGEVSCGSSHTIALSK----DGRT--- 582
Query: 143 RLWVWGQNQGSNFPRLFWG----AFTPNTI-------ICQVSCGSVHVVALSECGLLQAW 191
VW G N +L G + P + I +V GS +AL+ G + AW
Sbjct: 583 ---VWSFGGGDNVGKLGHGDTNRVYKPKVVEALQGMFIRKVCAGSQSSLALTSTGQVYAW 639
Query: 192 GYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYT 251
G LG G + P++I+ A +I +S G+ H + EVY
Sbjct: 640 GCGAC--LGCGSSEATALRPKLIEELAA--------TRIVDISIGDSHVWLFVMDNEVYA 689
Query: 252 WGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTS 300
WG S+GQ G + S P++V LDGI I+ ++ G HS A T+
Sbjct: 690 WGNNSMGQCGQGN--STGPITKPKKVSGLDGIAIQQISAGTSHSLAWTA 736
Score = 256 (95.2 bits), Expect = 9.6e-18, P = 9.6e-18
Identities = 83/255 (32%), Positives = 124/255 (48%)
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTI--- 139
++ WG+N QL +GT+E P+ L ++I G +CT I+ DG++
Sbjct: 374 VYVWGSNSSHQLVEGTQEKILQPKMA--LSFSDAQTIEAGQYCTFVIS----TDGSVRAC 427
Query: 140 ---STSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSC--GSV-HVVALSECGLLQAWGY 193
S RL + N S +L F P+ I +VS GS H +A + G + +WG
Sbjct: 428 GKGSYGRLGLGDSNNQSTLKKL---TFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGD 484
Query: 194 NEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQ-VSCGEYHSAAVSENGEVYTW 252
+YG+LG G + P++I+G P K+ VS G HSAAV+E+GE+YTW
Sbjct: 485 GDYGKLGHG-NSSTQKYPKLIQG--------PLQGKVVVCVSAGYRHSAAVTEDGELYTW 535
Query: 253 GLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAW---GG 309
G G G+LGH S + +P V + + +V+CG H+ AL+ G W GG
Sbjct: 536 GEGDFGRLGHGDSNSRN---IPTLVKDISNV--GEVSCGSSHTIALSKDGRT-VWSFGGG 589
Query: 310 SQAGQLGLGPQTRSF 324
G+LG G R +
Sbjct: 590 DNVGKLGHGDTNRVY 604
Score = 256 (95.2 bits), Expect = 9.6e-18, P = 9.6e-18
Identities = 91/307 (29%), Positives = 143/307 (46%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ WG G+ G +RQ R P+Q+ L G + ++CG +H+A V SDG
Sbjct: 4104 VFSWGDGDYGKLGHGNSDRQRR-PRQIEA-LQG------EEVVQMSCGFKHSAVVTSDGK 4155
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
LFT+G ++G+LG G +K PE+V L+ + ++CG + T A++ DG S
Sbjct: 4156 LFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSA----DG----S 4207
Query: 143 RLWVWGQNQGSNFPRLFWGAFTPNT------IIC-----QVSCGSVHVVALSECGLLQAW 191
+W +G ++ +L G T + ++C +V+CG+ VAL++ G + +
Sbjct: 4208 MVWAFGDG---DYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTF 4264
Query: 192 GYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYT 251
G + L G P+ I A + I V+ G H+ A++ G+VY
Sbjct: 4265 GQDRLIGLPEG-RARNHNRPQQIPVLAGVV--------IEDVAVGAEHTLALASTGDVYA 4315
Query: 252 WGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGAL-YAWGGS 310
WG S GQLG L + P V L G I+ ++ G HS A T+ A G S
Sbjct: 4316 WGSNSEGQLG---LGHTNHVREPTLVTVLQGKNIRQISAGRCHSAAWTAPPVPPRAPGVS 4372
Query: 311 QAGQLGL 317
QLGL
Sbjct: 4373 VPLQLGL 4379
Score = 221 (82.9 bits), Expect = 6.8e-14, P = 6.8e-14
Identities = 78/283 (27%), Positives = 123/283 (43%)
Query: 141 TSRLWVWGQNQGSNF-----PRLFWGAFTPNTIICQ-VSCGSVHVVALSECGLLQAWGYN 194
T ++VWG N ++ + Q + G +S G ++A G
Sbjct: 371 TCEVYVWGSNSSHQLVEGTQEKILQPKMALSFSDAQTIEAGQYCTFVISTDGSVRACGKG 430
Query: 195 EYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGL 254
YG+LG G + +K + ++K++ + H+ A + GEV++WG
Sbjct: 431 SYGRLGLGDS----NNQSTLKKLT--FEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGD 484
Query: 255 GSVGQLGHCSLQSGDKELLPRRVVA-LDGIFIKDVACGGVHSCALTSKGALYAWGGSQAG 313
G G+LGH + S K P+ + L G + V+ G HS A+T G LY WG G
Sbjct: 485 GDYGKLGHGN-SSTQK--YPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFG 541
Query: 314 QLGLGPQTRSFSLIPNESDTYFRNIPILVVP-NGVQLVACGHSHTLVYMRDGRIHGWGY- 371
+LG G D+ RNIP LV + V V+CG SHT+ +DGR W +
Sbjct: 542 RLGHG-------------DSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTV-WSFG 587
Query: 372 --NSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVL 411
++ G+ + + + P V+ G +RK+ AG S L
Sbjct: 588 GGDNVGKLGHGDTNRVYKPKVVEALQGMFIRKVCAGSQSSLAL 630
Score = 211 (79.3 bits), Expect = 1.1e-21, Sum P(2) = 1.1e-21
Identities = 66/184 (35%), Positives = 94/184 (51%)
Query: 229 KITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDV 288
+I QV+CG H+ AVS +G + W G G G L + + P++V L GI IK V
Sbjct: 4188 QIGQVACGLNHTLAVSADGSM-VWAFGD-GDYGKLGLGNSTAKSSPQKVDVLCGIGIKKV 4245
Query: 289 ACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQ 348
ACG S ALT G +Y +G Q +GL P+ R+ N + + IP+L GV
Sbjct: 4246 ACGTQFSVALTKDGHVYTFG--QDRLIGL-PEGRA----RNHNRP--QQIPVLA---GVV 4293
Query: 349 L--VACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGG 405
+ VA G HTL G ++ WG NS GQ + + P+ V G+ +R+++AG
Sbjct: 4294 IEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVREPTLVTVLQGKNIRQISAGR 4353
Query: 406 GHSA 409
HSA
Sbjct: 4354 CHSA 4357
Score = 184 (69.8 bits), Expect = 1.0e-18, Sum P(2) = 1.0e-18
Identities = 69/228 (30%), Positives = 100/228 (43%)
Query: 191 WGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVY 250
WG +GQL G V+ A AP + QV CG+ + + NG V
Sbjct: 4003 WGAGRHGQLAEA-------GRNVMVPAA-----APSFSQAQQVICGQNCTFVIQANGTVL 4050
Query: 251 TWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDV--ACGGV-HSCALTSKGALYAW 307
G GS G+LG + S D +L + AL G + + +CG HS ALT G +++W
Sbjct: 4051 ACGEGSYGRLGQGN--SDDLHVLTV-ISALQGFVVTQLVTSCGSDGHSMALTESGEVFSW 4107
Query: 308 GGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIH 367
G G+LG G R P R I L VQ+ +CG H+ V DG++
Sbjct: 4108 GDGDYGKLGHGNSDRQRR--P-------RQIEALQGEEVVQM-SCGFKHSAVVTSDGKLF 4157
Query: 368 GWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHS-AVLAD 413
+G YG+ ++ P V G ++ ++A G H+ AV AD
Sbjct: 4158 TFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSAD 4205
Score = 140 (54.3 bits), Expect = 1.1e-21, Sum P(2) = 1.1e-21
Identities = 50/185 (27%), Positives = 78/185 (42%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+YVWG N S Q +E+ L+ PK A + S I G T +++DG+
Sbjct: 374 VYVWGSNSSHQLVEGTQEKILQ-PKM---------ALSFSDAQTIEAGQYCTFVISTDGS 423
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCG----AHCTAAIAEPREND-G 137
+ G +G+LG G + +K+ +K +S H A E G
Sbjct: 424 VRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWG 483
Query: 138 TISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYG 197
+L G + +P+L G ++C VS G H A++E G L WG ++G
Sbjct: 484 DGDYGKLG-HGNSSTQKYPKLIQGPLQGKVVVC-VSAGYRHSAAVTEDGELYTWGEGDFG 541
Query: 198 QLGRG 202
+LG G
Sbjct: 542 RLGHG 546
Score = 128 (50.1 bits), Expect = 0.00086, P = 0.00086
Identities = 46/173 (26%), Positives = 77/173 (44%)
Query: 243 VSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKG 302
VSE EVY WG S QL G +E + + +AL + + G + +++ G
Sbjct: 368 VSETCEVYVWGSNSSHQL-----VEGTQEKILQPKMALSFSDAQTIEAGQYCTFVISTDG 422
Query: 303 ALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMR 362
++ A G G+LGLG +L + + R+I + G HTL +
Sbjct: 423 SVRACGKGSYGRLGLGDSNNQSTLKKLTFEPH-RSIKKVSSSKG------SDGHTLAFTT 475
Query: 363 DGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCV-GEVRK-LAAGGGHSAVLAD 413
+G + WG YG+ + S+ YP + + G+V ++AG HSA + +
Sbjct: 476 EGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528
Score = 38 (18.4 bits), Expect = 3.2e-16, Sum P(2) = 3.2e-16
Identities = 12/41 (29%), Positives = 16/41 (39%)
Query: 287 DVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLI 327
D+ V + A +G AW G L +G S LI
Sbjct: 3523 DIQPHWVSALAWPEEGPATAWSGESPELLLVGRMDGSLGLI 3563
>UNIPROTKB|F1NUG6 [details] [associations]
symbol:Gga.50841 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005929
"cilium" evidence=IEA] [GO:0007601 "visual perception"
evidence=IEA] [GO:0042462 "eye photoreceptor cell development"
evidence=IEA] INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005737
GO:GO:0005929 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012
GeneTree:ENSGT00700000104160 EMBL:AADN02011054 IPI:IPI00586770
Ensembl:ENSGALT00000026211 OMA:ENGLMFT Uniprot:F1NUG6
Length = 720
Score = 300 (110.7 bits), Expect = 7.9e-24, P = 7.9e-24
Identities = 102/316 (32%), Positives = 154/316 (48%)
Query: 61 NSRWLDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSIS 120
N + + I+CG EHTA V +G L+ +G+N++GQLG G++ + P VK L+ E K
Sbjct: 36 NDKPVHISCGDEHTAVVTGNGKLYMFGSNDWGQLGLGSKNTVRKPTCVKALKPEKTKLAV 95
Query: 121 CGAHCTAAIAEPRE--NDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVH 178
CG + T E G S +L + + + F + + FT I Q++ GS
Sbjct: 96 CGRNHTLVYTEKGNVYAAGGNSEGQLGLGDTEERTTFHLISF--FTNQHKIKQLAAGSYT 153
Query: 179 VVALSECGLLQAWGYNEYGQLGRGI-TCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGE 237
A++E G L WG N GQ+G TC + +V G + ++ +SCG
Sbjct: 154 SAAVTEDGQLFVWGDNSEGQIGLADKTCVSVPC-QVDVG-----------KPVSSISCGY 201
Query: 238 YHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIF--IKDVACGGVHS 295
YHSA ++ +GE+YT+G G+LG Q + + P+ V+ GI + VACGG H+
Sbjct: 202 YHSAFITGDGELYTFGEPENGKLGLLPEQLKNSRV-PQPVL---GIMEKVNKVACGGEHT 257
Query: 296 CALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNG---VQLVAC 352
LT G +Y +G Q GQLG G T F +S + R+ I V G ++A
Sbjct: 258 VVLTETG-VYTFGLGQYGQLGHG--TLLFKTSVPKSVKHLRSHKIHNVTCGESHTAVIAD 314
Query: 353 GHSHTLVYMRDGRIHG 368
+ + DGR HG
Sbjct: 315 TENGLMFTFGDGR-HG 329
Score = 279 (103.3 bits), Expect = 2.0e-21, P = 2.0e-21
Identities = 93/304 (30%), Positives = 142/304 (46%)
Query: 69 CGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEF-VKSISCGAHCTA 127
CG HT G ++ G N GQLG G E R + ++ +K ++ G++ +A
Sbjct: 96 CGRNHTLVYTEKGNVYAAGGNSEGQLGLGDTEERTTFHLISFFTNQHKIKQLAAGSYTSA 155
Query: 128 AIAEPRENDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQV---------SCGSVH 178
A+ E DG +L+VWG N ++ T ++ CQV SCG H
Sbjct: 156 AVTE----DG-----QLFVWGDNSEG---QIGLADKTCVSVPCQVDVGKPVSSISCGYYH 203
Query: 179 VVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEY 238
++ G L +G E G+LG + E L+ RV + + EK+ +V+CG
Sbjct: 204 SAFITGDGELYTFGEPENGKLG--LLPEQLKNSRVPQPVLGIM------EKVNKVACGGE 255
Query: 239 HSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCAL 298
H+ ++E G VYT+GLG GQLGH +L K +P+ V L I +V CG H+ +
Sbjct: 256 HTVVLTETG-VYTFGLGQYGQLGHGTLLF--KTSVPKSVKHLRSHKIHNVTCGESHTAVI 312
Query: 299 --TSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSH 356
T G ++ +G + G+LGLG + + P F + +L LVACG H
Sbjct: 313 ADTENGLMFTFGDGRHGKLGLGEENFANQFDPALCSN-FLSFTVL-------LVACGGCH 364
Query: 357 TLVY 360
LV+
Sbjct: 365 MLVF 368
Score = 224 (83.9 bits), Expect = 2.9e-15, P = 2.9e-15
Identities = 71/237 (29%), Positives = 107/237 (45%)
Query: 182 LSECGLLQAWGYNEYGQL-GRGITCEGLQGPRVIKGYAKF--LDEAPELEKITQVSCGEY 238
L+ CG Y E G + G EG G + F + KI Q++ G Y
Sbjct: 93 LAVCGRNHTLVYTEKGNVYAAGGNSEGQLGLGDTEERTTFHLISFFTNQHKIKQLAAGSY 152
Query: 239 HSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCAL 298
SAAV+E+G+++ WG S GQ+G L +P +V G + ++CG HS +
Sbjct: 153 TSAAVTEDGQLFVWGDNSEGQIG---LADKTCVSVPCQVDV--GKPVSSISCGYYHSAFI 207
Query: 299 TSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTL 358
T G LY +G + G+LGL P+ S +P P+L + V VACG HT+
Sbjct: 208 TGDGELYTFGEPENGKLGLLPEQLKNSRVPQ---------PVLGIMEKVNKVACGGEHTV 258
Query: 359 VYMRDGRIHGWGYNSYGQAANEKSTYAW-YPSPVDWCVG-EVRKLAAGGGHSAVLAD 413
V G ++ +G YGQ + + P V ++ + G H+AV+AD
Sbjct: 259 VLTETG-VYTFGLGQYGQLGHGTLLFKTSVPKSVKHLRSHKIHNVTCGESHTAVIAD 314
Score = 210 (79.0 bits), Expect = 1.0e-13, P = 1.0e-13
Identities = 63/185 (34%), Positives = 86/185 (46%)
Query: 228 EKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKD 287
+K +SCG+ H+A V+ NG++Y +G GQLG L S + P V AL K
Sbjct: 37 DKPVHISCGDEHTAVVTGNGKLYMFGSNDWGQLG---LGSKNTVRKPTCVKALKPEKTKL 93
Query: 288 VACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGV 347
CG H+ T KG +YA GG+ GQLGLG E T F I + +
Sbjct: 94 AVCGRNHTLVYTEKGNVYAAGGNSEGQLGLGD---------TEERTTFHLISFFTNQHKI 144
Query: 348 QLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGG 406
+ +A G + DG++ WG NS GQ T P VD VG+ V ++ G
Sbjct: 145 KQLAAGSYTSAAVTEDGQLFVWGDNSEGQIGLADKTCVSVPCQVD--VGKPVSSISCGYY 202
Query: 407 HSAVL 411
HSA +
Sbjct: 203 HSAFI 207
Score = 185 (70.2 bits), Expect = 5.8e-11, P = 5.8e-11
Identities = 61/193 (31%), Positives = 86/193 (44%)
Query: 228 EKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIF--- 284
EK CG H+ +E G VY G S GQLG GD E R L F
Sbjct: 89 EKTKLAVCGRNHTLVYTEKGNVYAAGGNSEGQLG-----LGDTE--ERTTFHLISFFTNQ 141
Query: 285 --IKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILV 342
IK +A G S A+T G L+ WG + GQ+GL +T S +P + D
Sbjct: 142 HKIKQLAAGSYTSAAVTEDGQLFVWGDNSEGQIGLADKT-CVS-VPCQVD---------- 189
Query: 343 VPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAA--NEKSTYAWYPSPVDWCVGEVRK 400
V V ++CG+ H+ DG ++ +G G+ E+ + P PV + +V K
Sbjct: 190 VGKPVSSISCGYYHSAFITGDGELYTFGEPENGKLGLLPEQLKNSRVPQPVLGIMEKVNK 249
Query: 401 LAAGGGHSAVLAD 413
+A GG H+ VL +
Sbjct: 250 VACGGEHTVVLTE 262
Score = 166 (63.5 bits), Expect = 7.0e-09, P = 7.0e-09
Identities = 59/198 (29%), Positives = 90/198 (45%)
Query: 67 IACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCT 126
+A G +AAV DG LF WG N GQ+G + P +V + V SISCG + +
Sbjct: 147 LAAGSYTSAAVTEDGQLFVWGDNSEGQIGLADKTCVSVPCQVDV--GKPVSSISCGYYHS 204
Query: 127 AAIAEPRE--NDGTISTSRLWVWGQN-QGSNFPRLFWGAFTPNTIICQVSCGSVHVVALS 183
A I E G +L + + + S P+ G + +V+CG H V L+
Sbjct: 205 AFITGDGELYTFGEPENGKLGLLPEQLKNSRVPQPVLGIMEK---VNKVACGGEHTVVLT 261
Query: 184 ECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAV 243
E G+ +G +YGQLG G P+ +K + ++ +T A
Sbjct: 262 ETGVY-TFGLGQYGQLGHGTLLFKTSVPKSVKHL-----RSHKIHNVT-CGESHTAVIAD 314
Query: 244 SENGEVYTWGLGSVGQLG 261
+ENG ++T+G G G+LG
Sbjct: 315 TENGLMFTFGDGRHGKLG 332
Score = 144 (55.7 bits), Expect = 1.8e-06, P = 1.8e-06
Identities = 56/190 (29%), Positives = 90/190 (47%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++VWG N GQ G + + +P Q+ G P + I+CG+ H+A + DG
Sbjct: 163 LFVWGDNSEGQIGLADKTC-VSVPCQVD---VGKPVSS------ISCGYYHSAFITGDGE 212
Query: 83 LFTWGANEFGQLGDGTEE--GRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIS 140
L+T+G E G+LG E+ + P+ V + E V ++CG T + E G +
Sbjct: 213 LYTFGEPENGKLGLLPEQLKNSRVPQPVLGIM-EKVNKVACGGEHTVVLTET----G-VY 266
Query: 141 TSRLWVWGQ-NQGS-----NFPRLFWGAFTPNTIICQVSCGSVH--VVALSECGLLQAWG 192
T L +GQ G+ + P+ + I V+CG H V+A +E GL+ +G
Sbjct: 267 TFGLGQYGQLGHGTLLFKTSVPKSV--KHLRSHKIHNVTCGESHTAVIADTENGLMFTFG 324
Query: 193 YNEYGQLGRG 202
+G+LG G
Sbjct: 325 DGRHGKLGLG 334
Score = 134 (52.2 bits), Expect = 2.2e-05, P = 2.2e-05
Identities = 38/130 (29%), Positives = 61/130 (46%)
Query: 288 VACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGV 347
++CG H+ +T G LY +G + GQLGLG + T + + P
Sbjct: 42 ISCGDEHTAVVTGNGKLYMFGSNDWGQLGLGSKNTV------RKPTCVKALK----PEKT 91
Query: 348 QLVACGHSHTLVYMRDGRIHGWGYNSYGQAA----NEKSTYAWYPSPVDWCVGEVRKLAA 403
+L CG +HTLVY G ++ G NS GQ E++T+ + ++++LAA
Sbjct: 92 KLAVCGRNHTLVYTEKGNVYAAGGNSEGQLGLGDTEERTTFHLISFFTNQ--HKIKQLAA 149
Query: 404 GGGHSAVLAD 413
G SA + +
Sbjct: 150 GSYTSAAVTE 159
>TAIR|locus:2165770 [details] [associations]
symbol:AT5G42140 "AT5G42140" species:3702 "Arabidopsis
thaliana" [GO:0003682 "chromatin binding" evidence=ISS] [GO:0005576
"extracellular region" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=ISS] [GO:0008536 "Ran GTPase binding" evidence=ISS]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0007165 "signal
transduction" evidence=ISS] [GO:0035091 "phosphatidylinositol
binding" evidence=ISS] InterPro:IPR000306 Pfam:PF01363
SMART:SM00064 INTERPRO:IPR000408 Pfam:PF00415 EMBL:CP002688
GenomeReviews:BA000015_GR Gene3D:2.30.29.30 InterPro:IPR011993
GO:GO:0046872 EMBL:AB017067 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 Gene3D:3.30.40.10 InterPro:IPR017455
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
PROSITE:PS50178 PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012
eggNOG:COG5184 InterPro:IPR013591 Pfam:PF08381 PROSITE:PS51514
HSSP:Q15075 ProtClustDB:CLSN2686442 IPI:IPI00533393
RefSeq:NP_199029.1 UniGene:At.28039 ProteinModelPortal:Q9FHX1
SMR:Q9FHX1 PRIDE:Q9FHX1 EnsemblPlants:AT5G42140.1 GeneID:834219
KEGG:ath:AT5G42140 TAIR:At5g42140 HOGENOM:HOG000240974
InParanoid:Q9FHX1 OMA:RNEVFTW PhylomeDB:Q9FHX1
Genevestigator:Q9FHX1 Uniprot:Q9FHX1
Length = 1073
Score = 302 (111.4 bits), Expect = 9.8e-24, P = 9.8e-24
Identities = 95/317 (29%), Positives = 151/317 (47%)
Query: 23 IYVWG--YNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASD 80
IY WG +++G G G + IPK++ L G + ++CG HTA + S
Sbjct: 345 IYTWGDGTHNAGLLGH-GTDVSHWIPKRISGPLEGLQIAS------VSCGPWHTALITST 397
Query: 81 GTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEP--RENDGT 138
G LFT+G FG LG G +E +P +V+ L +++CG AAI E + +
Sbjct: 398 GQLFTFGDGTFGVLGHGDKETVFYPREVESLSGLRTIAVACGVWHAAAIVEVIVTHSSSS 457
Query: 139 ISTSRLWVWGQNQ------GSNFPRL---FWGAFTPNTIICQVSCGSVHVVALSECGLLQ 189
+S+ +L+ WG G PRL A +T +V+CG V L+ G +
Sbjct: 458 VSSGKLFTWGDGDKSRLGHGDKEPRLKPTCVSALIDHTFH-RVACGHSLTVGLTTSGKVY 516
Query: 190 AWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEV 249
G YGQLG +G + P +++ K + E +++CG YH A ++ EV
Sbjct: 517 TMGSTVYGQLGNP-NADG-KLPCLVED--KLTKDCVE-----EIACGAYHVAVLTSRNEV 567
Query: 250 YTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAW-G 308
+TWG G+ G+LGH ++ D++ P V AL +K++ACG + A+ L+ W
Sbjct: 568 FTWGKGANGRLGHGDVE--DRKA-PTLVDALKERHVKNIACGSNFTAAI----CLHKWVS 620
Query: 309 GSQAGQLGLGPQTRSFS 325
G++ Q Q F+
Sbjct: 621 GTEQSQCSACRQAFGFT 637
Score = 294 (108.6 bits), Expect = 8.1e-23, P = 8.1e-23
Identities = 117/420 (27%), Positives = 178/420 (42%)
Query: 15 DNIPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLD---IACGH 71
D+ A +Y+WG + G ++ + L P +N LD IACG
Sbjct: 223 DDCDALGDVYIWGEVLCENVTKFGADKNIGYLGSRSDVLIPKPLESNVV-LDVHHIACGV 281
Query: 72 EHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAE 131
+H A V+ G +FTWG G+LG G + P+ ++ L + + ++CG T A+
Sbjct: 282 KHAALVSRQGEVFTWGEASGGRLGHGMGKDVTGPQLIESLAATSIDFVACGEFHTCAVTM 341
Query: 132 PRE----NDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGL 187
E DGT + L G + P+ G I VSCG H ++ G
Sbjct: 342 TGEIYTWGDGTHNAGLLG-HGTDVSHWIPKRISGPLE-GLQIASVSCGPWHTALITSTGQ 399
Query: 188 LQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSE-- 245
L +G +G LG G E + PR ++ + L I V+CG +H+AA+ E
Sbjct: 400 LFTFGDGTFGVLGHGDK-ETVFYPREVESLSG-------LRTIA-VACGVWHAAAIVEVI 450
Query: 246 ---------NGEVYTWGLGSVGQLGHCSLQSGDKE--LLPRRVVAL-DGIFIKDVACGGV 293
+G+++TWG G +LGH GDKE L P V AL D F + VACG
Sbjct: 451 VTHSSSSVSSGKLFTWGDGDKSRLGH-----GDKEPRLKPTCVSALIDHTFHR-VACGHS 504
Query: 294 HSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACG 353
+ LT+ G +Y G + GQLG PN + + + V+ +ACG
Sbjct: 505 LTVGLTTSGKVYTMGSTVYGQLGN----------PNADGKLPCLVEDKLTKDCVEEIACG 554
Query: 354 HSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE--VRKLAAGGGHSAVL 411
H V + WG + G+ + P+ VD + E V+ +A G +A +
Sbjct: 555 AYHVAVLTSRNEVFTWGKGANGRLGHGDVEDRKAPTLVD-ALKERHVKNIACGSNFTAAI 613
Score = 152 (58.6 bits), Expect = 4.0e-07, P = 4.0e-07
Identities = 46/125 (36%), Positives = 61/125 (48%)
Query: 66 DIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHC 125
+IACG H A + S +FTWG G+LG G E RK P V L+ VK+I+CG++
Sbjct: 550 EIACGAYHVAVLTSRNEVFTWGKGANGRLGHGDVEDRKAPTLVDALKERHVKNIACGSNF 609
Query: 126 TAAIAEPRENDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSEC 185
TAAI + GT Q+Q S + F FT C +CG VH + S
Sbjct: 610 TAAICLHKWVSGT---------EQSQCSACRQAF--GFTRKRHNCY-NCGLVHCHSCSSK 657
Query: 186 GLLQA 190
L+A
Sbjct: 658 KSLKA 662
>UNIPROTKB|F1LPM8 [details] [associations]
symbol:Herc6 "Protein Herc6" species:10116 "Rattus
norvegicus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
Pfam:PF00632 InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119
RGD:1561739 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005634
GO:GO:0005737 GO:GO:0016567 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 SUPFAM:SSF56204 GeneTree:ENSGT00660000095216
EMBL:AC126722 IPI:IPI00553869 Ensembl:ENSRNOT00000058626
ArrayExpress:F1LPM8 Uniprot:F1LPM8
Length = 1036
Score = 300 (110.7 bits), Expect = 1.6e-23, P = 1.6e-23
Identities = 90/272 (33%), Positives = 131/272 (48%)
Query: 172 VSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKIT 231
VSCG H VA+ G + WG GQLG G + E P I A KI
Sbjct: 86 VSCGKEHSVAVCHQGRVFTWGAGSEGQLGIGESKEISFMPTKINSLAGI--------KII 137
Query: 232 QVSCGEYHSAAVSENGEVYTWGLGSVGQLG-HCSLQSGDKELLPRRVVALDGIFIKDVAC 290
QVSCG YHS A+SE+G+V++WG GQLG +L S + P++V +L+GI + VA
Sbjct: 138 QVSCGHYHSLALSEDGQVFSWGSNRQGQLGLGNNLCS---QASPQKVKSLEGIPLAQVAA 194
Query: 291 GGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLV 350
GG HS AL+ G + WG +++GQL L + I +I L N V +
Sbjct: 195 GGTHSFALSLMGTSFGWGNNRSGQLALSGNSAKAEQIYKP-----HSIGALKTLN-VVYI 248
Query: 351 ACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAV 410
+CG+ HT V DG++ +G +S Q + + P ++ G V ++ G H+
Sbjct: 249 SCGYEHTSVLTEDGQVFTFGGSSSEQLQHSPRSGRGGPQLIEGIGGHVSQIECGSYHT-- 306
Query: 411 LADACSLKELCEFRLAESVTLSNASEIEDVAS 442
+A + ++ S T SNA+ E S
Sbjct: 307 IAYVYTTGQVVSLGRGPSCT-SNATHQEAACS 337
Score = 277 (102.6 bits), Expect = 6.5e-21, P = 6.5e-21
Identities = 84/269 (31%), Positives = 130/269 (48%)
Query: 58 AGANSRWLDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEK-VKQLQSEFV 116
AG + L A G H+ + S+ +++ G N GQLG + + K PE+ ++ L + +
Sbjct: 24 AGTGLKLLKAASGERHSLLLFSNHRVYSCGDNSRGQLGQKSPQSTKRPEEPIQALSTVHI 83
Query: 117 KSISCGA-HCTAAIAEPREND-GTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSC 174
+SCG H A + R G S +L + G+++ +F + II QVSC
Sbjct: 84 DLVSCGKEHSVAVCHQGRVFTWGAGSEGQLGI-GESKEISFMPTKINSLAGIKII-QVSC 141
Query: 175 GSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVS 234
G H +ALSE G + +WG N GQLG G P+ +K L+ P + QV+
Sbjct: 142 GHYHSLALSEDGQVFSWGSNRQGQLGLGNNLCSQASPQKVKS----LEGIP----LAQVA 193
Query: 235 CGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELL--PRRVVALDGIFIKDVACGG 292
G HS A+S G + WG GQL S S E + P + AL + + ++CG
Sbjct: 194 AGGTHSFALSLMGTSFGWGNNRSGQLA-LSGNSAKAEQIYKPHSIGALKTLNVVYISCGY 252
Query: 293 VHSCALTSKGALYAWGGSQAGQLGLGPQT 321
H+ LT G ++ +GGS + QL P++
Sbjct: 253 EHTSVLTEDGQVFTFGGSSSEQLQHSPRS 281
Score = 269 (99.8 bits), Expect = 5.2e-20, P = 5.2e-20
Identities = 98/316 (31%), Positives = 141/316 (44%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSR-WLD-IACGHEHTAAVASD 80
+Y G N GQ G+K + R P E P A S +D ++CG EH+ AV
Sbjct: 49 VYSCGDNSRGQLGQKSPQSTKR-----PEE----PIQALSTVHIDLVSCGKEHSVAVCHQ 99
Query: 81 GTLFTWGANEFGQLGDG-TEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTI 139
G +FTWGA GQLG G ++E P K+ L + +SCG + + A++E DG +
Sbjct: 100 GRVFTWGAGSEGQLGIGESKEISFMPTKINSLAGIKIIQVSCGHYHSLALSE----DGQV 155
Query: 140 STSRLWVWGQN-QGS-NFPRLFWGAFTPNTI-------ICQVSCGSVHVVALSECGLLQA 190
+ WG N QG +P + + QV+ G H ALS G
Sbjct: 156 FS-----WGSNRQGQLGLGNNLCSQASPQKVKSLEGIPLAQVAAGGTHSFALSLMGTSFG 210
Query: 191 WGYNEYGQL---GRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENG 247
WG N GQL G E + P I G K L+ + +SCG H++ ++E+G
Sbjct: 211 WGNNRSGQLALSGNSAKAEQIYKPHSI-GALKTLN-------VVYISCGYEHTSVLTEDG 262
Query: 248 EVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAW 307
+V+T+G S QL H S +SG P+ + + G + + CG H+ A Y +
Sbjct: 263 QVFTFGGSSSEQLQH-SPRSGRGG--PQLIEGIGG-HVSQIECGSYHTIA-------YVY 311
Query: 308 GGSQAGQLGLGPQTRS 323
Q LG GP S
Sbjct: 312 TTGQVVSLGRGPSCTS 327
Score = 243 (90.6 bits), Expect = 4.1e-17, P = 4.1e-17
Identities = 78/250 (31%), Positives = 119/250 (47%)
Query: 169 ICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELE 228
+ + + G H + L + + G N GQLG+ + P+ K + + +A
Sbjct: 30 LLKAASGERHSLLLFSNHRVYSCGDNSRGQLGQ-------KSPQSTKRPEEPI-QALSTV 81
Query: 229 KITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDV 288
I VSCG+ HS AV G V+TWG GS GQLG +S + +P ++ +L GI I V
Sbjct: 82 HIDLVSCGKEHSVAVCHQGRVFTWGAGSEGQLGIG--ESKEISFMPTKINSLAGIKIIQV 139
Query: 289 ACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQ 348
+CG HS AL+ G +++WG ++ GQLGLG S P + + IP+ Q
Sbjct: 140 SCGHYHSLALSEDGQVFSWGSNRQGQLGLGNNLCS-QASPQKVKS-LEGIPL------AQ 191
Query: 349 LVACGHSHTLVYMRDGRIHGWGYNSYGQAA----NEKSTYAWYPSPVDWCVG-EVRKLAA 403
VA G +H+ G GWG N GQ A + K+ + P + V ++
Sbjct: 192 -VAAGGTHSFALSLMGTSFGWGNNRSGQLALSGNSAKAEQIYKPHSIGALKTLNVVYISC 250
Query: 404 GGGHSAVLAD 413
G H++VL +
Sbjct: 251 GYEHTSVLTE 260
Score = 201 (75.8 bits), Expect = 1.7e-12, P = 1.7e-12
Identities = 74/287 (25%), Positives = 126/287 (43%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ WG GQ G G +++ +P ++ A + + ++CGH H+ A++ DG
Sbjct: 102 VFTWGAGSEGQLGI-GESKEISF---MPTKINSL---AGIKIIQVSCGHYHSLALSEDGQ 154
Query: 83 LFTWGANEFGQLGDGTEE-GRKHPEKVKQLQSEFVKSISCGA-HCTA-AIAEPRENDGTI 139
+F+WG+N GQLG G + P+KVK L+ + ++ G H A ++ G
Sbjct: 155 VFSWGSNRQGQLGLGNNLCSQASPQKVKSLEGIPLAQVAAGGTHSFALSLMGTSFGWGNN 214
Query: 140 STSRLWVWGQNQGSNF---PRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEY 196
+ +L + G + + P T N + +SCG H L+E G + +G +
Sbjct: 215 RSGQLALSGNSAKAEQIYKPHSIGALKTLNVVY--ISCGYEHTSVLTEDGQVFTFGGSSS 272
Query: 197 GQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAA-VSENGEVYTWGLG 255
QL G GP++I+G ++Q+ CG YH+ A V G+V + G G
Sbjct: 273 EQLQHSPR-SGRGGPQLIEGIGGH---------VSQIECGSYHTIAYVYTTGQVVSLGRG 322
Query: 256 S--VGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTS 300
H D L +D I +KD+ G H+ +T+
Sbjct: 323 PSCTSNATHQEAACSDVTCLLSAKDLVD-IEVKDIFAGA-HANFVTT 367
Score = 135 (52.6 bits), Expect = 2.7e-05, P = 2.7e-05
Identities = 42/144 (29%), Positives = 67/144 (46%)
Query: 274 PRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGL-GPQTRSFSLIPNESD 332
PRR+ A G+ + A G HS L S +Y+ G + GQLG PQ+ P E
Sbjct: 19 PRRLEAGTGLKLLKAASGERHSLLLFSNHRVYSCGDNSRGQLGQKSPQSTKR---PEE-- 73
Query: 333 TYFRNIPILVVPN-GVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAA-NEKSTYAWYPSP 390
PI + + LV+CG H++ GR+ WG S GQ E ++ P+
Sbjct: 74 ------PIQALSTVHIDLVSCGKEHSVAVCHQGRVFTWGAGSEGQLGIGESKEISFMPTK 127
Query: 391 VDWCVG-EVRKLAAGGGHSAVLAD 413
++ G ++ +++ G HS L++
Sbjct: 128 INSLAGIKIIQVSCGHYHSLALSE 151
>TAIR|locus:505006603 [details] [associations]
symbol:AT5G12350 "AT5G12350" species:3702 "Arabidopsis
thaliana" [GO:0003682 "chromatin binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=ISS] [GO:0008536 "Ran GTPase binding" evidence=ISS]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IDA] [GO:0009630 "gravitropism" evidence=RCA]
[GO:0009887 "organ morphogenesis" evidence=RCA] [GO:0009888 "tissue
development" evidence=RCA] [GO:0010413 "glucuronoxylan metabolic
process" evidence=RCA] [GO:0010638 "positive regulation of
organelle organization" evidence=RCA] [GO:0033044 "regulation of
chromosome organization" evidence=RCA] [GO:0042546 "cell wall
biogenesis" evidence=RCA] [GO:0044036 "cell wall macromolecule
metabolic process" evidence=RCA] [GO:0045492 "xylan biosynthetic
process" evidence=RCA] InterPro:IPR000306 InterPro:IPR001849
InterPro:IPR024774 Pfam:PF01363 Pfam:PF12814 SMART:SM00064
SMART:SM00233 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005886
GO:GO:0005938 EMBL:CP002688 GO:GO:0005543 Gene3D:2.30.29.30
InterPro:IPR011993 GO:GO:0046872 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 Gene3D:3.30.40.10
InterPro:IPR017455 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 PROSITE:PS50178 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 GO:GO:0032065 InterPro:IPR013591 Pfam:PF08381
PROSITE:PS51514 IPI:IPI00540281 RefSeq:NP_568268.3 UniGene:At.22310
UniGene:At.51056 ProteinModelPortal:F4K0X5 SMR:F4K0X5
EnsemblPlants:AT5G12350.1 GeneID:831110 KEGG:ath:AT5G12350
OMA:NTNGHPR Uniprot:F4K0X5
Length = 1075
Score = 299 (110.3 bits), Expect = 2.2e-23, P = 2.2e-23
Identities = 93/284 (32%), Positives = 130/284 (45%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+Y WG G G G E +PK++ L G + IACG HTA V S G
Sbjct: 381 LYTWGKGDFGVLGH-GNEVSHWVPKRVNFLLEGIHVSS------IACGPYHTAVVTSAGQ 433
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPR---ENDGTI 139
LFT+G FG LG G ++ P +V L+ +CG TAA+ E +
Sbjct: 434 LFTFGDGTFGVLGHGDKKSVFIPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNC 493
Query: 140 STSRLWVWGQNQ------GSNFPRLF----WGAFTPNTIICQVSCGSVHVVALSECGLLQ 189
S+ +L+ WG G+ P+L PN CQV+CG VAL+ G +
Sbjct: 494 SSGKLFTWGDGDKGRLGHGNKEPKLVPTCVAALVEPN--FCQVACGHSLTVALTTSGHVY 551
Query: 190 AWGYNEYGQLGRGITCEGLQGPRVIKG--YAKFLDEAPELEKITQVSCGEYHSAAVSENG 247
G YGQLG +G + P ++G + F++E ++CG YH A ++
Sbjct: 552 TMGSPVYGQLGNS-HADG-KTPNRVEGKLHKSFVEE---------IACGAYHVAVLTSRT 600
Query: 248 EVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACG 291
EVYTWG GS G+LGH + D P V +L +K +ACG
Sbjct: 601 EVYTWGKGSNGRLGHGDV---DDRNSPTLVESLKDKQVKSIACG 641
Score = 296 (109.3 bits), Expect = 4.8e-23, P = 4.8e-23
Identities = 115/372 (30%), Positives = 165/372 (44%)
Query: 70 GHEHTAAVASDGTLFTWGAN-EFGQLGDGTEE-GRKHPEKV-----KQLQSEFV---KSI 119
GH+ A+ G +F WG G LG G G K+ K L+S V ++I
Sbjct: 257 GHDDGDAL---GDVFIWGEGIGEGVLGGGNRRVGSSFDIKMDSLLPKALESTIVLDVQNI 313
Query: 120 SCGAHCTAAIAEPREND--GTISTSRLWVWGQNQGSNF--PRLFWGAFTPNTIICQVSCG 175
+CG + + E+ G S RL G SN P+L T N + V+CG
Sbjct: 314 ACGGQHAVLVTKQGESFSWGEESEGRL---GHGVDSNIQQPKLIDALNTTNIEL--VACG 368
Query: 176 SVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSC 235
H A++ G L WG ++G LG G RV FL E ++ ++C
Sbjct: 369 EFHSCAVTLSGDLYTWGKGDFGVLGHGNEVSHWVPKRV-----NFLLEGIH---VSSIAC 420
Query: 236 GEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKE--LLPRRVVALDGIFIKDVACGGV 293
G YH+A V+ G+++T+G G+ G LGH GDK+ +PR V +L G+ ACG
Sbjct: 421 GPYHTAVVTSAGQLFTFGDGTFGVLGH-----GDKKSVFIPREVDSLKGLRTVRAACGVW 475
Query: 294 HSCALT------------SKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPIL 341
H+ A+ S G L+ WG G+LG G + L+P + L
Sbjct: 476 HTAAVVEVMVGSSSSSNCSSGKLFTWGDGDKGRLGHG--NKEPKLVPT-------CVAAL 526
Query: 342 VVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE--VR 399
V PN Q VACGHS T+ G ++ G YGQ N + P+ V+ + + V
Sbjct: 527 VEPNFCQ-VACGHSLTVALTTSGHVYTMGSPVYGQLGNSHAD-GKTPNRVEGKLHKSFVE 584
Query: 400 KLAAGGGHSAVL 411
++A G H AVL
Sbjct: 585 EIACGAYHVAVL 596
Score = 282 (104.3 bits), Expect = 1.9e-21, P = 1.9e-21
Identities = 109/368 (29%), Positives = 156/368 (42%)
Query: 24 YVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLD-IACGHEHTAAVASDGT 82
+ WG G+ G G + ++ PK + N+ ++ +ACG H+ AV G
Sbjct: 330 FSWGEESEGRLGH-GVDSNIQQPKLID--------ALNTTNIELVACGEFHSCAVTLSGD 380
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVK-QLQSEFVKSISCGAHCTAAIAEPRE----NDG 137
L+TWG +FG LG G E P++V L+ V SI+CG + TA + + DG
Sbjct: 381 LYTWGKGDFGVLGHGNEVSHWVPKRVNFLLEGIHVSSIACGPYHTAVVTSAGQLFTFGDG 440
Query: 138 TISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVAL----------SEC-- 185
T G + PR T+ + +CG H A+ S C
Sbjct: 441 TFGVLG---HGDKKSVFIPREVDSLKGLRTV--RAACGVWHTAAVVEVMVGSSSSSNCSS 495
Query: 186 GLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSE 245
G L WG + G+LG G + P+++ L E P QV+CG + A++
Sbjct: 496 GKLFTWGDGDKGRLGHGN-----KEPKLVPTCVAALVE-PNF---CQVACGHSLTVALTT 546
Query: 246 NGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVA-LDGIFIKDVACGGVHSCALTSKGAL 304
+G VYT G GQLG+ S G P RV L F++++ACG H LTS+ +
Sbjct: 547 SGHVYTMGSPVYGQLGN-SHADGKT---PNRVEGKLHKSFVEEIACGAYHVAVLTSRTEV 602
Query: 305 YAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVP---NGVQLVACGHSHTLVYM 361
Y WG G+LG G D RN P LV V+ +ACG + T
Sbjct: 603 YTWGKGSNGRLGHG-------------DVDDRNSPTLVESLKDKQVKSIACGTNFTAAVC 649
Query: 362 RDGRIHGW 369
IH W
Sbjct: 650 ----IHRW 653
Score = 254 (94.5 bits), Expect = 2.6e-18, P = 2.6e-18
Identities = 76/248 (30%), Positives = 116/248 (46%)
Query: 172 VSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKIT 231
++CG H V +++ G +WG G+LG G+ +Q P++I +A I
Sbjct: 313 IACGGQHAVLVTKQGESFSWGEESEGRLGHGVD-SNIQQPKLI--------DALNTTNIE 363
Query: 232 QVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRV-VALDGIFIKDVAC 290
V+CGE+HS AV+ +G++YTWG G G LGH + S +P+RV L+GI + +AC
Sbjct: 364 LVACGEFHSCAVTLSGDLYTWGKGDFGVLGHGNEVS---HWVPKRVNFLLEGIHVSSIAC 420
Query: 291 GGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLV 350
G H+ +TS G L+ +G G LG G + F IP E D+ + + + GV
Sbjct: 421 GPYHTAVVTSAGQLFTFGDGTFGVLGHGDKKSVF--IPREVDS-LKGLRTVRAACGVWHT 477
Query: 351 AC------GHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAG 404
A G S + G++ WG G+ + P+ V V E
Sbjct: 478 AAVVEVMVGSSSSS-NCSSGKLFTWGDGDKGRLGHGNKEPKLVPTCVAALV-EPNFCQVA 535
Query: 405 GGHSAVLA 412
GHS +A
Sbjct: 536 CGHSLTVA 543
Score = 219 (82.2 bits), Expect = 1.9e-14, P = 1.9e-14
Identities = 59/196 (30%), Positives = 96/196 (48%)
Query: 219 KFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVV 278
K L+ L+ + ++CG H+ V++ GE ++WG S G+LGH + S ++ P+ +
Sbjct: 300 KALESTIVLD-VQNIACGGQHAVLVTKQGESFSWGEESEGRLGH-GVDSNIQQ--PKLID 355
Query: 279 ALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNI 338
AL+ I+ VACG HSCA+T G LY WG G LG G + + +P + +
Sbjct: 356 ALNTTNIELVACGEFHSCAVTLSGDLYTWGKGDFGVLGHGNEVSHW--VP-------KRV 406
Query: 339 PILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-E 397
L+ V +ACG HT V G++ +G ++G + + P VD G
Sbjct: 407 NFLLEGIHVSSIACGPYHTAVVTSAGQLFTFGDGTFGVLGHGDKKSVFIPREVDSLKGLR 466
Query: 398 VRKLAAGGGHSAVLAD 413
+ A G H+A + +
Sbjct: 467 TVRAACGVWHTAAVVE 482
Score = 176 (67.0 bits), Expect = 9.8e-10, P = 9.8e-10
Identities = 51/180 (28%), Positives = 83/180 (46%)
Query: 247 GEVYTWGLG-SVGQLGHCSLQSGDK------ELLPRRVVALDGIFIKDVACGGVHSCALT 299
G+V+ WG G G LG + + G LLP+ + + + ++++ACGG H+ +T
Sbjct: 265 GDVFIWGEGIGEGVLGGGNRRVGSSFDIKMDSLLPKALESTIVLDVQNIACGGQHAVLVT 324
Query: 300 SKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLV 359
+G ++WG G+LG G + P D L N ++LVACG H+
Sbjct: 325 KQGESFSWGEESEGRLGHGVDSNIQQ--PKLIDA-------LNTTN-IELVACGEFHSCA 374
Query: 360 YMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCV-G-EVRKLAAGGGHSAVLADACSL 417
G ++ WG +G + W P V++ + G V +A G H+AV+ A L
Sbjct: 375 VTLSGDLYTWGKGDFGVLGHGNEVSHWVPKRVNFLLEGIHVSSIACGPYHTAVVTSAGQL 434
Score = 145 (56.1 bits), Expect = 2.3e-06, P = 2.3e-06
Identities = 37/111 (33%), Positives = 53/111 (47%)
Query: 66 DIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHC 125
+IACG H A + S ++TWG G+LG G + R P V+ L+ + VKSI+CG +
Sbjct: 585 EIACGAYHVAVLTSRTEVYTWGKGSNGRLGHGDVDDRNSPTLVESLKDKQVKSIACGTNF 644
Query: 126 TAAIAEPRENDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGS 176
TAA+ R G + G Q +F R + + C SC S
Sbjct: 645 TAAVCIHRWASGM---DQSMCSGCRQPFSFKRKRHNCYNCGLVFCH-SCTS 691
>MGI|MGI:1344037 [details] [associations]
symbol:Rpgr "retinitis pigmentosa GTPase regulator"
species:10090 "Mus musculus" [GO:0001750 "photoreceptor outer
segment" evidence=ISO] [GO:0005085 "guanyl-nucleotide exchange
factor activity" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005794
"Golgi apparatus" evidence=IDA] [GO:0005813 "centrosome"
evidence=ISO] [GO:0005856 "cytoskeleton" evidence=IEA] [GO:0005929
"cilium" evidence=IDA] [GO:0007601 "visual perception"
evidence=ISO;IMP] [GO:0030030 "cell projection organization"
evidence=IEA] [GO:0042384 "cilium assembly" evidence=ISO]
[GO:0042462 "eye photoreceptor cell development" evidence=IMP]
[GO:0042995 "cell projection" evidence=IEA] [GO:0050896 "response
to stimulus" evidence=IEA] MGI:MGI:1344037 INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005794 GO:GO:0005737 GO:GO:0005813
GO:GO:0005929 GO:GO:0007601 GO:GO:0050896 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0005085 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 GO:GO:0042073
eggNOG:COG5184 GO:GO:0036064 GO:GO:0042462
GeneTree:ENSGT00700000104160 GO:GO:0036126 CTD:6103
HOGENOM:HOG000231314 HOVERGEN:HBG026899 ChiTaRS:RPGR EMBL:AF044677
EMBL:AJ238396 EMBL:AJ318464 EMBL:AL671042 EMBL:AK017192
EMBL:BX005236 EMBL:HQ260316 IPI:IPI00122416 IPI:IPI00128188
IPI:IPI00230648 IPI:IPI00230650 RefSeq:NP_001171421.1
RefSeq:NP_035415.1 UniGene:Mm.247556 ProteinModelPortal:Q9R0X5
SMR:Q9R0X5 DIP:DIP-46319N STRING:Q9R0X5 PhosphoSite:Q9R0X5
PRIDE:Q9R0X5 Ensembl:ENSMUST00000044598 GeneID:19893 KEGG:mmu:19893
UCSC:uc009sqj.2 InParanoid:Q9R0X5 NextBio:297416 CleanEx:MM_RPGR
Genevestigator:Q9R0X5 GermOnline:ENSMUSG00000031174 Uniprot:Q9R0X5
Length = 1001
Score = 297 (109.6 bits), Expect = 3.3e-23, P = 3.3e-23
Identities = 89/255 (34%), Positives = 132/255 (51%)
Query: 67 IACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCT 126
++CG EHTA V + L+ +G+N +GQLG G++ P +K L+ E VK +CG + T
Sbjct: 40 LSCGDEHTAIVTGNNKLYMFGSNNWGQLGLGSKAAIIKPTCIKALKPEKVKLAACGRNHT 99
Query: 127 AAIAEPRE--NDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSE 184
+ G + +L + + F ++ + FTP I Q+S G+ AL+E
Sbjct: 100 LVSTDTGGVYAAGGNNEGQLGLGDTDDRDTFHQIVF--FTPADTIKQLSAGANTSAALTE 157
Query: 185 CGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVS 244
G L WG N GQ+G L+ K E + I+ +SCG YHSA V+
Sbjct: 158 DGKLFMWGDNSEGQIG-------LED----KSNVCIPHEVTVGKPISWISCGYYHSAFVT 206
Query: 245 ENGEVYTWGLGSVGQLGHCS-LQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGA 303
+GE+YT+G G+LG + L + P+RV+ + I+ VACGG H+ LT K
Sbjct: 207 MDGELYTFGEPENGKLGLPNELLMNHRS--PQRVLGIPERVIQ-VACGGGHTVVLTEK-V 262
Query: 304 LYAWGGSQAGQLGLG 318
+YA+G Q GQLGLG
Sbjct: 263 VYAFGLGQFGQLGLG 277
Score = 261 (96.9 bits), Expect = 3.9e-19, P = 3.9e-19
Identities = 90/300 (30%), Positives = 139/300 (46%)
Query: 68 ACGHEHTAAVASDGTLFTWGANEFGQLGDG-TEEGRKHPEKVKQLQSEFVKSISCGAHCT 126
ACG HT G ++ G N GQLG G T++ + V ++ +K +S GA+ +
Sbjct: 93 ACGRNHTLVSTDTGGVYAAGGNNEGQLGLGDTDDRDTFHQIVFFTPADTIKQLSAGANTS 152
Query: 127 AAIAEPRENDGTISTSRLWVWGQN-QGSNFPRLFWGAFTPNTI-----ICQVSCGSVHVV 180
AA+ E DG +L++WG N +G P+ + I +SCG H
Sbjct: 153 AALTE----DG-----KLFMWGDNSEGQIGLEDKSNVCIPHEVTVGKPISWISCGYYHSA 203
Query: 181 ALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHS 240
++ G L +G E G+LG + E L R + + L PE ++ QV+CG H+
Sbjct: 204 FVTMDGELYTFGEPENGKLG--LPNELLMNHRSPQ---RVLG-IPE--RVIQVACGGGHT 255
Query: 241 AAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTS 300
++E VY +GLG GQLG + E P+ + + I ++CG H+ +T
Sbjct: 256 VVLTEK-VVYAFGLGQFGQLGLGTFLFETSE--PKIIERIKDQKICHISCGENHTALMTE 312
Query: 301 KGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVY 360
G LY +G + G+LGLG + + P + R VQL+ACG H LV+
Sbjct: 313 LGLLYTFGDGRHGKLGLGMENFTNQFFPTLCSNFLRF--------AVQLIACGGCHMLVF 364
Score = 218 (81.8 bits), Expect = 2.2e-14, P = 2.2e-14
Identities = 68/231 (29%), Positives = 111/231 (48%)
Query: 67 IACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCT 126
++ G +AA+ DG LF WG N GQ+G + P +V + + ISCG + +
Sbjct: 145 LSAGANTSAALTEDGKLFMWGDNSEGQIGLEDKSNVCIPHEVTV--GKPISWISCGYYHS 202
Query: 127 AAIAEPRE--NDGTISTSRLWVWGQN-QGSNFPRLFWGAFTPNTIICQVSCGSVHVVALS 183
A + E G +L + + P+ G P +I QV+CG H V L+
Sbjct: 203 AFVTMDGELYTFGEPENGKLGLPNELLMNHRSPQRVLGI--PERVI-QVACGGGHTVVLT 259
Query: 184 ECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAV 243
E ++ A+G ++GQLG G P++I+ + D+ KI +SCGE H+A +
Sbjct: 260 E-KVVYAFGLGQFGQLGLGTFLFETSEPKIIE---RIKDQ-----KICHISCGENHTALM 310
Query: 244 SENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVH 294
+E G +YT+G G G+LG +++ + P ++ +ACGG H
Sbjct: 311 TELGLLYTFGDGRHGKLG-LGMENFTNQFFPTLCSNFLRFAVQLIACGGCH 360
Score = 197 (74.4 bits), Expect = 1.0e-13, Sum P(2) = 1.0e-13
Identities = 76/238 (31%), Positives = 119/238 (50%)
Query: 230 ITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCS-LQSGDKELLPRRVVALDGIFIKDV 288
I+ +SCG YHSA V+ +GE+YT+G G+LG + L + P+RV+ + I+ V
Sbjct: 192 ISWISCGYYHSAFVTMDGELYTFGEPENGKLGLPNELLMNHRS--PQRVLGIPERVIQ-V 248
Query: 289 ACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQ 348
ACGG H+ LT K +YA+G Q GQLGLG +F +E R + +
Sbjct: 249 ACGGGHTVVLTEK-VVYAFGLGQFGQLGLG----TFLFETSEPKIIER-----IKDQKIC 298
Query: 349 LVACGHSHTLVYMRDGRIHGWGYNSYGQAA--NEKSTYAWYPSPV-DWCVGEVRKLAAGG 405
++CG +HT + G ++ +G +G+ E T ++P+ ++ V+ +A GG
Sbjct: 299 HISCGENHTALMTELGLLYTFGDGRHGKLGLGMENFTNQFFPTLCSNFLRFAVQLIACGG 358
Query: 406 GHSAVLADACSLKELCE--FRLAESVTLSNAS-EIEDVASRTG-SEAL-ARLCERLRE 458
H V A L + E F +S S I D++ R+ + +L ARL R RE
Sbjct: 359 CHMLVFATP-RLGTIDEPKFEDVYEPYISTGSFSINDLSPRSSLNRSLSARLRRRERE 415
Score = 197 (74.4 bits), Expect = 4.5e-12, P = 4.5e-12
Identities = 60/199 (30%), Positives = 95/199 (47%)
Query: 134 ENDGTI-STSRLWVWGQNQ-GSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAW 191
E++ + T ++ +G+ + N P FW F + IC +SCG H ++ L +
Sbjct: 3 ESESLVPDTGAVFTFGKTKFAENIPSKFW--FKNDIPIC-LSCGDEHTAIVTGNNKLYMF 59
Query: 192 GYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYT 251
G N +GQLG G ++ P IK A + EK+ +CG H+ ++ G VY
Sbjct: 60 GSNNWGQLGLGSKAAIIK-PTCIK--------ALKPEKVKLAACGRNHTLVSTDTGGVYA 110
Query: 252 WGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQ 311
G + GQLG + D++ + V IK ++ G S ALT G L+ WG +
Sbjct: 111 AGGNNEGQLGLGD--TDDRDTFHQIVFFTPADTIKQLSAGANTSAALTEDGKLFMWGDNS 168
Query: 312 AGQLGLGPQTRSFSLIPNE 330
GQ+GL + +S IP+E
Sbjct: 169 EGQIGL--EDKSNVCIPHE 185
Score = 193 (73.0 bits), Expect = 1.2e-11, P = 1.2e-11
Identities = 57/178 (32%), Positives = 87/178 (48%)
Query: 233 VSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGG 292
+SCG+ H+A V+ N ++Y +G + GQLG L S + P + AL +K ACG
Sbjct: 40 LSCGDEHTAIVTGNNKLYMFGSNNWGQLG---LGSKAAIIKPTCIKALKPEKVKLAACGR 96
Query: 293 VHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVAC 352
H+ T G +YA GG+ GQLGLG ++ DT F I + ++ ++
Sbjct: 97 NHTLVSTDTGGVYAAGGNNEGQLGLGDT--------DDRDT-FHQIVFFTPADTIKQLSA 147
Query: 353 GHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSA 409
G + + DG++ WG NS GQ E + P V VG+ + ++ G HSA
Sbjct: 148 GANTSAALTEDGKLFMWGDNSEGQIGLEDKSNVCIPHEVT--VGKPISWISCGYYHSA 203
Score = 181 (68.8 bits), Expect = 2.5e-10, P = 2.5e-10
Identities = 54/188 (28%), Positives = 86/188 (45%)
Query: 228 EKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKD 287
EK+ +CG H+ ++ G VY G + GQLG + D++ + V IK
Sbjct: 87 EKVKLAACGRNHTLVSTDTGGVYAAGGNNEGQLGLGD--TDDRDTFHQIVFFTPADTIKQ 144
Query: 288 VACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGV 347
++ G S ALT G L+ WG + GQ+GL + +S IP+E + V +
Sbjct: 145 LSAGANTSAALTEDGKLFMWGDNSEGQIGL--EDKSNVCIPHE----------VTVGKPI 192
Query: 348 QLVACGHSHTLVYMRDGRIHGWGYNSYGQAA--NEKSTYAWYPSPVDWCVGEVRKLAAGG 405
++CG+ H+ DG ++ +G G+ NE P V V ++A GG
Sbjct: 193 SWISCGYYHSAFVTMDGELYTFGEPENGKLGLPNELLMNHRSPQRVLGIPERVIQVACGG 252
Query: 406 GHSAVLAD 413
GH+ VL +
Sbjct: 253 GHTVVLTE 260
Score = 169 (64.5 bits), Expect = 5.2e-09, P = 5.2e-09
Identities = 54/189 (28%), Positives = 88/189 (46%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+++WG N GQ G + + + IP ++ G P W I+CG+ H+A V DG
Sbjct: 161 LFMWGDNSEGQIGLEDKSN-VCIPHEVT---VGKPIS----W--ISCGYYHSAFVTMDGE 210
Query: 83 LFTWGANEFGQLGDGTEEGRKH--PEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIS 140
L+T+G E G+LG E H P++V + ++ ++CG T + E +
Sbjct: 211 LYTFGEPENGKLGLPNELLMNHRSPQRVLGIPERVIQ-VACGGGHTVVLTEK-----VVY 264
Query: 141 TSRLWVWGQNQGSNF------PRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYN 194
L +GQ F P++ + IC +SCG H ++E GLL +G
Sbjct: 265 AFGLGQFGQLGLGTFLFETSEPKII--ERIKDQKICHISCGENHTALMTELGLLYTFGDG 322
Query: 195 EYGQLGRGI 203
+G+LG G+
Sbjct: 323 RHGKLGLGM 331
Score = 128 (50.1 bits), Expect = 0.00015, P = 0.00015
Identities = 39/132 (29%), Positives = 66/132 (50%)
Query: 288 VACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGV 347
++CG H+ +T LY +G + GQLGLG + ++I T + + P V
Sbjct: 40 LSCGDEHTAIVTGNNKLYMFGSNNWGQLGLGSKA---AII---KPTCIKALK----PEKV 89
Query: 348 QLVACGHSHTLVYMRDGRIHGWGYNSYGQAA----NEKSTYAW--YPSPVDWCVGEVRKL 401
+L ACG +HTLV G ++ G N+ GQ +++ T+ + +P D +++L
Sbjct: 90 KLAACGRNHTLVSTDTGGVYAAGGNNEGQLGLGDTDDRDTFHQIVFFTPAD----TIKQL 145
Query: 402 AAGGGHSAVLAD 413
+AG SA L +
Sbjct: 146 SAGANTSAALTE 157
Score = 63 (27.2 bits), Expect = 1.0e-13, Sum P(2) = 1.0e-13
Identities = 37/138 (26%), Positives = 54/138 (39%)
Query: 72 EHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAE 131
E + V G +FT+G +F + P K +++ +SCG TA +
Sbjct: 3 ESESLVPDTGAVFTFGKTKFAE---------NIPSKF-WFKNDIPICLSCGDEHTAIVTG 52
Query: 132 PRENDGTISTSRLWVWGQ-NQGSNF----PRLFWGAFTPNTIICQVSCGSVHVVALSECG 186
N + S W GQ GS P A P + +CG H + ++ G
Sbjct: 53 --NNKLYMFGSNNW--GQLGLGSKAAIIKPTCI-KALKPEKVKL-AACGRNHTLVSTDTG 106
Query: 187 LLQAWGYNEYGQLGRGIT 204
+ A G N GQLG G T
Sbjct: 107 GVYAAGGNNEGQLGLGDT 124
>UNIPROTKB|Q92834 [details] [associations]
symbol:RPGR "X-linked retinitis pigmentosa GTPase
regulator" species:9606 "Homo sapiens" [GO:0005085
"guanyl-nucleotide exchange factor activity" evidence=IEA]
[GO:0050896 "response to stimulus" evidence=IEA] [GO:0035085
"cilium axoneme" evidence=IEA] [GO:0005794 "Golgi apparatus"
evidence=ISS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0007601 "visual perception" evidence=IMP] [GO:0001750
"photoreceptor outer segment" evidence=IDA] [GO:0005813
"centrosome" evidence=IDA] [GO:0042384 "cilium assembly"
evidence=IMP] [GO:0042073 "intraflagellar transport" evidence=ISS]
[GO:0036064 "cilium basal body" evidence=ISS] [GO:0036126 "sperm
flagellum" evidence=ISS] [GO:0006886 "intracellular protein
transport" evidence=TAS] INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005794 GO:GO:0005813 GO:GO:0006886 GO:GO:0007601
Orphanet:1872 Orphanet:791 GO:GO:0050896 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0005085 GO:GO:0042384
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
EMBL:CH471141 GO:GO:0042073 GO:GO:0001750 eggNOG:COG5184
Orphanet:244 GO:GO:0036064 Orphanet:49382 GO:GO:0036126
EMBL:AL606748 CTD:6103 HOVERGEN:HBG026899 EMBL:U57629 EMBL:X97668
EMBL:AJ238395 EMBL:AJ318463 EMBL:BC031624 EMBL:AF286471
EMBL:BK005711 IPI:IPI00023757 IPI:IPI00215806 IPI:IPI00215807
IPI:IPI00215808 IPI:IPI00382445 IPI:IPI00397031 RefSeq:NP_000319.1
RefSeq:NP_001030025.1 UniGene:Hs.61438 ProteinModelPortal:Q92834
SMR:Q92834 STRING:Q92834 PhosphoSite:Q92834 DMDM:23503098
PaxDb:Q92834 PRIDE:Q92834 DNASU:6103 Ensembl:ENST00000309513
Ensembl:ENST00000318842 Ensembl:ENST00000338898
Ensembl:ENST00000339363 Ensembl:ENST00000342811
Ensembl:ENST00000378505 Ensembl:ENST00000474584
Ensembl:ENST00000482855 GeneID:6103 KEGG:hsa:6103 UCSC:uc004deb.3
GeneCards:GC0XM038128 HGNC:HGNC:10295 HPA:HPA001593 MIM:300029
MIM:300455 MIM:300834 MIM:304020 MIM:312610 neXtProt:NX_Q92834
Orphanet:247522 PharmGKB:PA34656 OMA:NNVLPHY PhylomeDB:Q92834
ChiTaRS:RPGR GenomeRNAi:6103 NextBio:23741 ArrayExpress:Q92834
Bgee:Q92834 CleanEx:HS_RPGR Genevestigator:Q92834
GermOnline:ENSG00000156313 Uniprot:Q92834
Length = 1020
Score = 299 (110.3 bits), Expect = 4.1e-23, Sum P(2) = 4.1e-23
Identities = 93/300 (31%), Positives = 141/300 (47%)
Query: 68 ACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEF-VKSISCGAHCT 126
ACG HT G ++ G N GQLG G E R + SE +K +S G++ +
Sbjct: 93 ACGRNHTLVSTEGGNVYATGGNNEGQLGLGDTEERNTFHVISFFTSEHKIKQLSAGSNTS 152
Query: 127 AAIAEPRENDGTISTSRLWVWGQN-QGSNFPRLFWGAFTPNTI-----ICQVSCGSVHVV 180
AA+ E DG RL++WG N +G + P + + +SCG H
Sbjct: 153 AALTE----DG-----RLFMWGDNSEGQIGLKNVSNVCVPQQVTIGKPVSWISCGYYHSA 203
Query: 181 ALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHS 240
++ G L +G E G+LG + + L R + + E PE K+ QV+CG H+
Sbjct: 204 FVTTDGELYVFGEPENGKLG--LPNQLLGNHRT----PQLVSEIPE--KVIQVACGGEHT 255
Query: 241 AAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTS 300
++EN VYT+GLG GQLG + E P+ + + I ++CG H+ +T
Sbjct: 256 VVLTENA-VYTFGLGQFGQLGLGTFLFETSE--PKVIENIRDQTISYISCGENHTALITD 312
Query: 301 KGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVY 360
G +Y +G + G+LGLG + + IP + R I V+LVACG H +V+
Sbjct: 313 IGLMYTFGDGRHGKLGLGLENFTNHFIPTLCSNFLRFI--------VKLVACGGCHMVVF 364
Score = 282 (104.3 bits), Expect = 4.5e-21, Sum P(2) = 4.5e-21
Identities = 85/254 (33%), Positives = 127/254 (50%)
Query: 67 IACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCT 126
++CG EH+A V + L+ +G+N +GQLG G++ P VK L+ E VK +CG + T
Sbjct: 40 LSCGDEHSAVVTGNNKLYMFGSNNWGQLGLGSKSAISKPTCVKALKPEKVKLAACGRNHT 99
Query: 127 AAIAEPRE--NDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSE 184
E G + +L + + + F + + FT I Q+S GS AL+E
Sbjct: 100 LVSTEGGNVYATGGNNEGQLGLGDTEERNTFHVISF--FTSEHKIKQLSAGSNTSAALTE 157
Query: 185 CGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVS 244
G L WG N GQ+G +V G + ++ +SCG YHSA V+
Sbjct: 158 DGRLFMWGDNSEGQIGLKNVSNVCVPQQVTIG-----------KPVSWISCGYYHSAFVT 206
Query: 245 ENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGAL 304
+GE+Y +G G+LG + G+ P+ V + I+ VACGG H+ LT + A+
Sbjct: 207 TDGELYVFGEPENGKLGLPNQLLGNHRT-PQLVSEIPEKVIQ-VACGGEHTVVLT-ENAV 263
Query: 305 YAWGGSQAGQLGLG 318
Y +G Q GQLGLG
Sbjct: 264 YTFGLGQFGQLGLG 277
Score = 191 (72.3 bits), Expect = 9.6e-11, Sum P(2) = 9.6e-11
Identities = 59/178 (33%), Positives = 86/178 (48%)
Query: 233 VSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGG 292
+SCG+ HSA V+ N ++Y +G + GQLG S + K P V AL +K ACG
Sbjct: 40 LSCGDEHSAVVTGNNKLYMFGSNNWGQLGLGSKSAISK---PTCVKALKPEKVKLAACGR 96
Query: 293 VHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVAC 352
H+ T G +YA GG+ GQLGLG E +T F I + ++ ++
Sbjct: 97 NHTLVSTEGGNVYATGGNNEGQLGLGDT--------EERNT-FHVISFFTSEHKIKQLSA 147
Query: 353 GHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSA 409
G + + DGR+ WG NS GQ + + P V +G+ V ++ G HSA
Sbjct: 148 GSNTSAALTEDGRLFMWGDNSEGQIGLKNVSNVCVPQQVT--IGKPVSWISCGYYHSA 203
Score = 188 (71.2 bits), Expect = 6.7e-13, Sum P(2) = 6.7e-13
Identities = 76/245 (31%), Positives = 113/245 (46%)
Query: 230 ITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVA 289
++ +SCG YHSA V+ +GE+Y +G G+LG + G+ P+ V + I+ VA
Sbjct: 192 VSWISCGYYHSAFVTTDGELYVFGEPENGKLGLPNQLLGNHRT-PQLVSEIPEKVIQ-VA 249
Query: 290 CGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQL 349
CGG H+ LT + A+Y +G Q GQLGLG +F L NI +
Sbjct: 250 CGGEHTVVLT-ENAVYTFGLGQFGQLGLG----TF-LFETSEPKVIENIR----DQTISY 299
Query: 350 VACGHSHTLVYMRDGRIHGWGYNSYGQAAN--EKSTYAWYPSPVDWCVGEVRKLAAGGG- 406
++CG +HT + G ++ +G +G+ E T + P+ + + KL A GG
Sbjct: 300 ISCGENHTALITDIGLMYTFGDGRHGKLGLGLENFTNHFIPTLCSNFLRFIVKLVACGGC 359
Query: 407 HSAVLADACS--LKELCEFRLAESVTLSNASEIEDVASRTGSEALAR-LCERLR--EHSL 461
H V A KE+ EF LS A+ + +S T L R L R+R E
Sbjct: 360 HMVVFAAPHRGVAKEI-EFDEINDTCLSVATFLP-YSSLTSGNVLQRTLSARMRRRERER 417
Query: 462 HGDEF 466
D F
Sbjct: 418 SPDSF 422
Score = 177 (67.4 bits), Expect = 3.3e-09, Sum P(2) = 3.3e-09
Identities = 56/180 (31%), Positives = 83/180 (46%)
Query: 144 LWVWGQNQ-GSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRG 202
++ +G+++ N P FW F N + +SCG H ++ L +G N +GQLG G
Sbjct: 14 VFTFGKSKFAENNPGKFW--FK-NDVPVHLSCGDEHSAVVTGNNKLYMFGSNNWGQLGLG 70
Query: 203 ITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGH 262
+ + P +K A + EK+ +CG H+ +E G VY G + GQLG
Sbjct: 71 -SKSAISKPTCVK--------ALKPEKVKLAACGRNHTLVSTEGGNVYATGGNNEGQLG- 120
Query: 263 CSLQSGDKELLPRRVVALDGIF-----IKDVACGGVHSCALTSKGALYAWGGSQAGQLGL 317
GD E R + F IK ++ G S ALT G L+ WG + GQ+GL
Sbjct: 121 ----LGDTE--ERNTFHVISFFTSEHKIKQLSAGSNTSAALTEDGRLFMWGDNSEGQIGL 174
Score = 165 (63.1 bits), Expect = 6.7e-08, Sum P(2) = 6.7e-08
Identities = 51/189 (26%), Positives = 89/189 (47%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+++WG N GQ G K + +P+Q+ G P W I+CG+ H+A V +DG
Sbjct: 161 LFMWGDNSEGQIGLKNVSN-VCVPQQVT---IGKPVS----W--ISCGYYHSAFVTTDGE 210
Query: 83 LFTWGANEFGQLGDGTEEGRKH--PEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIS 140
L+ +G E G+LG + H P+ V ++ + ++ ++CG T + E +
Sbjct: 211 LYVFGEPENGKLGLPNQLLGNHRTPQLVSEIPEKVIQ-VACGGEHTVVLTE-----NAVY 264
Query: 141 TSRLWVWGQNQGSNF------PRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYN 194
T L +GQ F P++ + I +SCG H +++ GL+ +G
Sbjct: 265 TFGLGQFGQLGLGTFLFETSEPKVIENI--RDQTISYISCGENHTALITDIGLMYTFGDG 322
Query: 195 EYGQLGRGI 203
+G+LG G+
Sbjct: 323 RHGKLGLGL 331
Score = 162 (62.1 bits), Expect = 3.1e-08, P = 3.1e-08
Identities = 63/229 (27%), Positives = 99/229 (43%)
Query: 228 EKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIF--- 284
EK+ +CG H+ +E G VY G + GQLG GD E R + F
Sbjct: 87 EKVKLAACGRNHTLVSTEGGNVYATGGNNEGQLG-----LGDTE--ERNTFHVISFFTSE 139
Query: 285 --IKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILV 342
IK ++ G S ALT G L+ WG + GQ+GL + S +P + +
Sbjct: 140 HKIKQLSAGSNTSAALTEDGRLFMWGDNSEGQIGL--KNVSNVCVPQQ----------VT 187
Query: 343 VPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSP--VDWCVGEVRK 400
+ V ++CG+ H+ DG ++ +G G+ + +P V +V +
Sbjct: 188 IGKPVSWISCGYYHSAFVTTDGELYVFGEPENGKLGLPNQLLGNHRTPQLVSEIPEKVIQ 247
Query: 401 LAAGGGHSAVLAD-ACSLKELCEF-RLAESVTLSNASE---IEDVASRT 444
+A GG H+ VL + A L +F +L L SE IE++ +T
Sbjct: 248 VACGGEHTVVLTENAVYTFGLGQFGQLGLGTFLFETSEPKVIENIRDQT 296
Score = 141 (54.7 bits), Expect = 2.6e-05, Sum P(2) = 2.6e-05
Identities = 47/152 (30%), Positives = 73/152 (48%)
Query: 67 IACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCT 126
++ G +AA+ DG LF WG N GQ+G P++V + V ISCG + +
Sbjct: 145 LSAGSNTSAALTEDGRLFMWGDNSEGQIGLKNVSNVCVPQQVTI--GKPVSWISCGYYHS 202
Query: 127 AAIAEPREND--GTISTSRLWVWGQNQGSN-FPRLFWGAFTPNTIICQVSCGSVHVVALS 183
A + E G +L + Q G++ P+L + P +I QV+CG H V L+
Sbjct: 203 AFVTTDGELYVFGEPENGKLGLPNQLLGNHRTPQLV--SEIPEKVI-QVACGGEHTVVLT 259
Query: 184 ECGLLQAWGYNEYGQLGRGITCEGLQGPRVIK 215
E + +G ++GQLG G P+VI+
Sbjct: 260 E-NAVYTFGLGQFGQLGLGTFLFETSEPKVIE 290
Score = 136 (52.9 bits), Expect = 2.1e-05, P = 2.1e-05
Identities = 42/132 (31%), Positives = 64/132 (48%)
Query: 288 VACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGV 347
++CG HS +T LY +G + GQLGLG S S I T + + P V
Sbjct: 40 LSCGDEHSAVVTGNNKLYMFGSNNWGQLGLG----SKSAI--SKPTCVKALK----PEKV 89
Query: 348 QLVACGHSHTLVYMRDGRIHGWGYNSYGQAA----NEKSTYAWYPSPVDWCVGE--VRKL 401
+L ACG +HTLV G ++ G N+ GQ E++T+ + + E +++L
Sbjct: 90 KLAACGRNHTLVSTEGGNVYATGGNNEGQLGLGDTEERNTF----HVISFFTSEHKIKQL 145
Query: 402 AAGGGHSAVLAD 413
+AG SA L +
Sbjct: 146 SAGSNTSAALTE 157
Score = 132 (51.5 bits), Expect = 0.00024, Sum P(2) = 0.00024
Identities = 44/164 (26%), Positives = 78/164 (47%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+YV+G + G+ G QL + P+L + + + +ACG EHT V ++
Sbjct: 211 LYVFG---EPENGKLGLPNQL-LGNHRTPQLV---SEIPEKVIQVACGGEHTV-VLTENA 262
Query: 83 LFTWGANEFGQLGDGTEEGR-KHPEKVKQLQSEFVKSISCGAHCTAAIAEP--RENDGTI 139
++T+G +FGQLG GT P+ ++ ++ + + ISCG + TA I + G
Sbjct: 263 VYTFGLGQFGQLGLGTFLFETSEPKVIENIRDQTISYISCGENHTALITDIGLMYTFGDG 322
Query: 140 STSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALS 183
+L + +N ++F F I+ V+CG H+V +
Sbjct: 323 RHGKLGLGLENFTNHFIPTLCSNFL-RFIVKLVACGGCHMVVFA 365
Score = 65 (27.9 bits), Expect = 6.7e-13, Sum P(2) = 6.7e-13
Identities = 32/128 (25%), Positives = 55/128 (42%)
Query: 81 GTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRE--NDGT 138
G +FT+G ++F + +P K +++ +SCG +A + + G+
Sbjct: 12 GAVFTFGKSKFAE---------NNPGKF-WFKNDVPVHLSCGDEHSAVVTGNNKLYMFGS 61
Query: 139 ISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQ 198
+ +L + G + P A P + +CG H + +E G + A G N GQ
Sbjct: 62 NNWGQLGL-GSKSAISKPTCV-KALKPEKVKL-AACGRNHTLVSTEGGNVYATGGNNEGQ 118
Query: 199 LGRGITCE 206
LG G T E
Sbjct: 119 LGLGDTEE 126
Score = 41 (19.5 bits), Expect = 4.1e-23, Sum P(2) = 4.1e-23
Identities = 13/42 (30%), Positives = 21/42 (50%)
Query: 397 EVRKLAAGGGHSAVLADACSLKELCEFRLAESVTLSNASEIE 438
E+ K + GGHS ++A + E +LAE + + E E
Sbjct: 622 EIEK-ESDGGHSQKESEAEEIDSEKETKLAEIAGMKDLRERE 662
>UNIPROTKB|E1BW48 [details] [associations]
symbol:HERC2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0020037
"heme binding" evidence=IEA] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005743 "mitochondrial inner membrane" evidence=IEA]
[GO:0006281 "DNA repair" evidence=IEA] [GO:0007283
"spermatogenesis" evidence=IEA] [GO:0031625 "ubiquitin protein
ligase binding" evidence=IEA] [GO:0032183 "SUMO binding"
evidence=IEA] Pfam:PF00632 InterPro:IPR000433 InterPro:IPR000569
InterPro:IPR001199 InterPro:IPR009060 InterPro:IPR010606
Pfam:PF00173 Pfam:PF00569 Pfam:PF06701 PROSITE:PS01357
PROSITE:PS50135 PROSITE:PS50237 PROSITE:PS50255 PROSITE:PS51416
SMART:SM00119 SMART:SM00291 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005634 GO:GO:0005743 GO:GO:0046872 GO:GO:0008270
GO:GO:0006281 GO:GO:0020037 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 Gene3D:3.10.120.10 SUPFAM:SSF55856
InterPro:IPR008979 SUPFAM:SSF49785 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 InterPro:IPR004939 Pfam:PF03256
PROSITE:PS51284 SUPFAM:SSF46934 Gene3D:2.30.30.30
InterPro:IPR021097 InterPro:IPR014722 Pfam:PF11515 SUPFAM:SSF56204
GeneTree:ENSGT00700000104208 OMA:QLAFTRD EMBL:AADN02017653
IPI:IPI00571031 Ensembl:ENSGALT00000027018 ArrayExpress:E1BW48
Uniprot:E1BW48
Length = 4841
Score = 316 (116.3 bits), Expect = 6.0e-23, Sum P(3) = 6.0e-23
Identities = 92/284 (32%), Positives = 135/284 (47%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
I+ WG G G+ G ++ K P L A R DIACG H+AA+ S G
Sbjct: 3072 IFSWG---EGDDGKLGHFSRMNCDK---PRLI--EALKTKRIRDIACGSSHSAAITSSGE 3123
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREN------D 136
L+TWG E+G+LG G + P+ VK L V ++CG+ +A E D
Sbjct: 3124 LYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGD 3183
Query: 137 GTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEY 196
G +L G ++G N P+ +CQ+ CG+ +AL++ G++ WG +Y
Sbjct: 3184 GDFG--KLGRGG-SEGCNIPQNIERLNGQG--VCQIECGAQFSLALTKSGVVWTWGKGDY 3238
Query: 197 GQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGS 256
+LG G T ++ P+V++G +KI V+ G H AV++ G+VY WG
Sbjct: 3239 FRLGHG-TDVHVRKPQVVEGLRG--------KKIVHVAVGALHCLAVTDTGQVYAWGDND 3289
Query: 257 VGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTS 300
GQ G+ + K P V L+G I VACG HS A T+
Sbjct: 3290 HGQQGNGTTTVNRK---PTLVQGLEGQKITRVACGSSHSVAWTT 3330
Score = 300 (110.7 bits), Expect = 4.0e-21, Sum P(2) = 4.0e-21
Identities = 93/298 (31%), Positives = 138/298 (46%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
+ ++ +Y WG G+ G R R P+ + L G +DIA G H+A
Sbjct: 4059 LSSEGEVYSWGEAEDGKLGHGNRSPCDR-PRVIE-SLRGIEV------VDIAAGGAHSAC 4110
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND 136
+ + G LFTWG +G+LG G E + P+ V+ LQ V I+CG+ + +D
Sbjct: 4111 ITAAGDLFTWGKGRYGRLGHGDSEDQLKPKLVEALQGYRVIDIACGSGDAQTLC--LTDD 4168
Query: 137 GTISTSRLWVWGQNQGSNFPRLFW-GAFTPNTI-------ICQVSCGSVHVVALSECGLL 188
T+ W WG R G P I + +V CGS VAL++ G +
Sbjct: 4169 DTV-----WSWGDGDYGKLGRGGSDGCKVPMKIDSLTDLGVVKVECGSQFSVALTKSGAV 4223
Query: 189 QAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENG- 247
WG +Y +LG G + + ++ PR ++G + +K+ ++ G H +E+G
Sbjct: 4224 YTWGKGDYHRLGHG-SDDHVRRPRQVQGL--------QGKKVIAIATGSLHCVCCTEDGL 4274
Query: 248 -EVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCAL-TSKGA 303
EVYTWG GQLG + + + PR V AL G I VACG H+ A TSK A
Sbjct: 4275 GEVYTWGDNDEGQLGDGTTNAIQR---PRLVAALQGKKINRVACGSAHTLAWSTSKPA 4329
Score = 299 (110.3 bits), Expect = 1.1e-20, Sum P(3) = 1.1e-20
Identities = 91/311 (29%), Positives = 152/311 (48%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
+ + +Y G +G+ G + IP+Q+ + + + + G H A
Sbjct: 3011 VTVEGKVYACGEATNGRLGLGISSGTVPIPRQIT-----ALSNYVVKKVAVHSGGRHAMA 3065
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND 136
+ DG +F+WG + G+LG + P ++ L+++ ++ I+CG+ +AAI +
Sbjct: 3066 LTVDGKIFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAIT----SS 3121
Query: 137 GTISTSRLWVWGQ-NQGSNFPRL---FWGAFTPNTIICQVSCGS--VHVVALSECGLLQA 190
G + T L +G+ G N +L + +I QV+CGS +AL++ GL+ +
Sbjct: 3122 GELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVI-QVACGSRDAQTLALTDEGLVFS 3180
Query: 191 WGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVY 250
WG ++G+LGRG + EG P+ I E + + Q+ CG S A++++G V+
Sbjct: 3181 WGDGDFGKLGRGGS-EGCNIPQNI--------ERLNGQGVCQIECGAQFSLALTKSGVVW 3231
Query: 251 TWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGS 310
TWG G +LGH + K P+ V L G I VA G +H A+T G +YAWG +
Sbjct: 3232 TWGKGDYFRLGHGTDVHVRK---PQVVEGLRGKKIVHVAVGALHCLAVTDTGQVYAWGDN 3288
Query: 311 QAGQLGLGPQT 321
GQ G G T
Sbjct: 3289 DHGQQGNGTTT 3299
Score = 286 (105.7 bits), Expect = 4.5e-19, Sum P(3) = 4.5e-19
Identities = 83/255 (32%), Positives = 132/255 (51%)
Query: 70 GHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSE----FVKSISCGAHC 125
GH H A++++G +F+WG + G+LG G + P+ + L + V I+CG+
Sbjct: 505 GH-HYLALSANGEVFSWGCGDGGRLGHGDTVPLEEPKLISALSGKQAGKHVVHIACGSTY 563
Query: 126 TAAIAEPRE--NDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGS--VHVVA 181
+AAI E G + RL G ++ P L G + VSCGS +A
Sbjct: 564 SAAITAEGELYTWGRGNYGRLG-HGSSEDQTIPMLVTGL--KGLKVIDVSCGSGDAQTLA 620
Query: 182 LSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSA 241
++E G + +WG +YG+LGRG + +G + P++I+ K D L+ I +V CG S
Sbjct: 621 VTENGQVWSWGDGDYGKLGRGGS-DGCKTPKLIE---KLQD----LD-IVKVRCGSQFSI 671
Query: 242 AVSENGEVYTWGLGSVGQLGHCSLQSGDKELL--PRRVVALDGIFIKDVACGGVHSCALT 299
A++++G+VYTWG G +LGH G +E + P+ + L G + DVA G H ALT
Sbjct: 672 ALTKDGQVYTWGKGDNQRLGH-----GTEEHVRYPKLLEGLKGKKVIDVAAGSTHCLALT 726
Query: 300 SKGALYAWGGSQAGQ 314
+++WG + Q
Sbjct: 727 EDSEVHSWGSNDQCQ 741
Score = 284 (105.0 bits), Expect = 3.2e-19, Sum P(2) = 3.2e-19
Identities = 87/303 (28%), Positives = 141/303 (46%)
Query: 23 IYVWGYNHSGQTGRKGRE-RQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDG 81
IY WG+NH GQ G G E ++++P P C A A R + + G + AV +DG
Sbjct: 3959 IYGWGHNHRGQLG--GIEGAKVKVPT---P----CEALATLRPVQLIGGEQTLFAVTADG 4009
Query: 82 TLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSI---SCGAHCTAAIAEPREND-G 137
L+ G G+LG G E P ++ +Q F+K + S G HC A +E G
Sbjct: 4010 KLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWG 4069
Query: 138 TISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYG 197
+L G + PR+ + ++ G H ++ G L WG YG
Sbjct: 4070 EAEDGKLG-HGNRSPCDRPRVIESL--RGIEVVDIAAGGAHSACITAAGDLFTWGKGRYG 4126
Query: 198 QLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCG--EYHSAAVSENGEVYTWGLG 255
+LG G + + L+ P+++ EA + ++ ++CG + + ++++ V++WG G
Sbjct: 4127 RLGHGDSEDQLK-PKLV--------EALQGYRVIDIACGSGDAQTLCLTDDDTVWSWGDG 4177
Query: 256 SVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQL 315
G+LG G K +P ++ +L + + V CG S ALT GA+Y WG +L
Sbjct: 4178 DYGKLGRGG-SDGCK--VPMKIDSLTDLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRL 4234
Query: 316 GLG 318
G G
Sbjct: 4235 GHG 4237
Score = 283 (104.7 bits), Expect = 4.2e-19, Sum P(2) = 4.2e-19
Identities = 94/311 (30%), Positives = 142/311 (45%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPP--ELFGCPAGANSRWLDIACGHEHT 74
+ A +Y GY G+ G G E + P L +F NS G +H
Sbjct: 4005 VTADGKLYATGYGAGGRLGIGGTE-SVSTPTLLESIQHVFIKKVAVNS-------GGKHC 4056
Query: 75 AAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQS-EFVKSISCGAH--CTAAIAE 131
A++S+G +++WG E G+LG G P ++ L+ E V + GAH C A +
Sbjct: 4057 LALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDIAAGGAHSACITAAGD 4116
Query: 132 PRENDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGS--VHVVALSECGLLQ 189
G RL G ++ P+L A +I ++CGS + L++ +
Sbjct: 4117 -LFTWGKGRYGRLG-HGDSEDQLKPKLV-EALQGYRVI-DIACGSGDAQTLCLTDDDTVW 4172
Query: 190 AWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEV 249
+WG +YG+LGRG + +G + P I D +L + +V CG S A++++G V
Sbjct: 4173 SWGDGDYGKLGRGGS-DGCKVPMKI-------DSLTDLG-VVKVECGSQFSVALTKSGAV 4223
Query: 250 YTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHS--CALTSKGALYAW 307
YTWG G +LGH S D PR+V L G + +A G +H C G +Y W
Sbjct: 4224 YTWGKGDYHRLGH---GSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGLGEVYTW 4280
Query: 308 GGSQAGQLGLG 318
G + GQLG G
Sbjct: 4281 GDNDEGQLGDG 4291
Score = 274 (101.5 bits), Expect = 1.2e-17, Sum P(3) = 1.2e-17
Identities = 90/293 (30%), Positives = 138/293 (47%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
+ A ++ WG G+ G G L PK L L G AG + + IACG ++AA
Sbjct: 511 LSANGEVFSWGCGDGGRLGH-GDTVPLEEPK-LISALSGKQAGKHV--VHIACGSTYSAA 566
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND 136
+ ++G L+TWG +G+LG G+ E + P V L+ V +SCG+ +A EN
Sbjct: 567 ITAEGELYTWGRGNYGRLGHGSSEDQTIPMLVTGLKGLKVIDVSCGSGDAQTLAVT-EN- 624
Query: 137 GTISTSRLWVWGQNQGSNFPRLFW-GAFTPNTI-------ICQVSCGSVHVVALSECGLL 188
++W WG R G TP I I +V CGS +AL++ G +
Sbjct: 625 -----GQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDIVKVRCGSQFSIALTKDGQV 679
Query: 189 QAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGE 248
WG + +LG G T E ++ P++++G +K+ V+ G H A++E+ E
Sbjct: 680 YTWGKGDNQRLGHG-TEEHVRYPKLLEGLKG--------KKVIDVAAGSTHCLALTEDSE 730
Query: 249 VYTWGLGSVGQLGHC-SLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTS 300
V++WG S Q H +L+ E P + LD I +ACG S A +S
Sbjct: 731 VHSWG--SNDQCQHFDTLRITKPE--PAALPGLDTKHIVGIACGPAQSFAWSS 779
Score = 271 (100.5 bits), Expect = 1.0e-17, Sum P(2) = 1.0e-17
Identities = 74/276 (26%), Positives = 127/276 (46%)
Query: 143 RLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRG 202
R++ N + P+L + N + H +ALS G + +WG + G+LG G
Sbjct: 472 RVYTQAYNSDTLGPQLVQSLASRNIVKIAAHSDGHHYLALSANGEVFSWGCGDGGRLGHG 531
Query: 203 ITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGH 262
T L+ P++I L + + ++CG +SAA++ GE+YTWG G+ G+LGH
Sbjct: 532 DTVP-LEEPKLISA----LSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGH 586
Query: 263 CSLQSGDKELLPRRVVALDGIFIKDVACGG--VHSCALTSKGALYAWGGSQAGQLGLGPQ 320
S + + +P V L G+ + DV+CG + A+T G +++WG G+LG G
Sbjct: 587 ---GSSEDQTIPMLVTGLKGLKVIDVSCGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGS 643
Query: 321 T--RSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAA 378
++ LI D + V CG ++ +DG+++ WG +
Sbjct: 644 DGCKTPKLIEKLQDL------------DIVKVRCGSQFSIALTKDGQVYTWGKGDNQRLG 691
Query: 379 NEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLAD 413
+ + YP ++ G+ V +AAG H L +
Sbjct: 692 HGTEEHVRYPKLLEGLKGKKVIDVAAGSTHCLALTE 727
Score = 268 (99.4 bits), Expect = 2.3e-17, Sum P(2) = 2.3e-17
Identities = 88/289 (30%), Positives = 143/289 (49%)
Query: 134 ENDGTISTSRLWVWGQNQ-----GSNFPRLFWGAF--TPNTI-ICQVSCGSVHVVALSEC 185
E+ TI T +++VWG N G ++ +F T + + + QV+ GS + A++
Sbjct: 2956 ESAATIRT-KVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVE 3014
Query: 186 GLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSE 245
G + A G G+LG GI+ + PR I + ++ ++K+ V G H+ A++
Sbjct: 3015 GKVYACGEATNGRLGLGISSGTVPIPRQITALSNYV-----VKKVA-VHSGGRHAMALTV 3068
Query: 246 NGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALY 305
+G++++WG G G+LGH S + DK PR + AL I+D+ACG HS A+TS G LY
Sbjct: 3069 DGKIFSWGEGDDGKLGHFSRMNCDK---PRLIEALKTKRIRDIACGSSHSAAITSSGELY 3125
Query: 306 AWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGH--SHTLVYMRD 363
WG + G+LG G T L P + + +L+ +Q VACG + TL +
Sbjct: 3126 TWGLGEYGRLGHGDNTTQ--LKP-------KMVKVLLGHRVIQ-VACGSRDAQTLALTDE 3175
Query: 364 GRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVL 411
G + WG +G+ S P ++ G+ V ++ G S L
Sbjct: 3176 GLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLAL 3224
Score = 253 (94.1 bits), Expect = 3.6e-15, Sum P(3) = 3.6e-15
Identities = 84/307 (27%), Positives = 141/307 (45%)
Query: 20 KSAIYVWGYNHSGQTGR-KGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVA 78
++ ++VWG N Q G KG + +++P F A + + +A G + AV
Sbjct: 2962 RTKVFVWGLNDKDQLGGLKGSK--IKVPS------FSETLSALNV-VQVAGGSKSLFAVT 3012
Query: 79 SDGTLFTWGANEFGQLGDGTEEGRKH-PEKVKQLQSEFVKSI---SCGAHCTAAIAEPRE 134
+G ++ G G+LG G G P ++ L + VK + S G H A + +
Sbjct: 3013 VEGKVYACGEATNGRLGLGISSGTVPIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKI 3072
Query: 135 ND-GTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGY 193
G +L + + + PRL T I ++CGS H A++ G L WG
Sbjct: 3073 FSWGEGDDGKLGHFSR-MNCDKPRLIEALKTKR--IRDIACGSSHSAAITSSGELYTWGL 3129
Query: 194 NEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCG--EYHSAAVSENGEVYT 251
EYG+LG G L+ P+++K L ++ QV+CG + + A+++ G V++
Sbjct: 3130 GEYGRLGHGDNTTQLK-PKMVK---VLLGH-----RVIQVACGSRDAQTLALTDEGLVFS 3180
Query: 252 WGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQ 311
WG G G+LG + + +P+ + L+G + + CG S ALT G ++ WG
Sbjct: 3181 WGDGDFGKLGRGGSEGCN---IPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGD 3237
Query: 312 AGQLGLG 318
+LG G
Sbjct: 3238 YFRLGHG 3244
Score = 240 (89.5 bits), Expect = 3.3e-14, Sum P(2) = 3.3e-14
Identities = 88/308 (28%), Positives = 132/308 (42%)
Query: 74 TAAVASDGTLFTWGANEFGQLGDGTEEGR-KHPEKVKQLQSEFVKSISCGAHCTAAIAEP 132
T + GT++ WG N GQLG G E + K P + L + + G A+
Sbjct: 3950 TLSAGGSGTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTAD 4008
Query: 133 RE--NDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQA 190
+ G + RL + G S P L V+ G H +ALS G + +
Sbjct: 4009 GKLYATGYGAGGRLGIGGTESVST-PTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYS 4067
Query: 191 WGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVY 250
WG E G+LG G PRVI+ ++ ++ G HSA ++ G+++
Sbjct: 4068 WGEAEDGKLGHG-NRSPCDRPRVIESLRGI--------EVVDIAAGGAHSACITAAGDLF 4118
Query: 251 TWGLGSVGQLGHCSLQSGDKE--LLPRRVVALDGIFIKDVACGG--VHSCALTSKGALYA 306
TWG G G+LGH GD E L P+ V AL G + D+ACG + LT +++
Sbjct: 4119 TWGKGRYGRLGH-----GDSEDQLKPKLVEALQGYRVIDIACGSGDAQTLCLTDDDTVWS 4173
Query: 307 WGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQL-VACGHSHTLVYMRDGR 365
WG G+LG G +P + D+ ++ ++ V G Q VA S + G
Sbjct: 4174 WGDGDYGKLGRGGSDGC--KVPMKIDS-LTDLGVVKVECGSQFSVALTKSGAVYTWGKGD 4230
Query: 366 IHGWGYNS 373
H G+ S
Sbjct: 4231 YHRLGHGS 4238
Score = 225 (84.3 bits), Expect = 1.5e-12, Sum P(2) = 1.5e-12
Identities = 74/244 (30%), Positives = 108/244 (44%)
Query: 171 QVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKI 230
Q+ G + A++ G L A GY G+LG G T E + P +++ ++K+
Sbjct: 3994 QLIGGEQTLFAVTADGKLYATGYGAGGRLGIGGT-ESVSTPTLLESIQHVF-----IKKV 4047
Query: 231 TQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVAC 290
V+ G H A+S GEVY+WG G+LGH + D+ PR + +L GI + D+A
Sbjct: 4048 A-VNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDR---PRVIESLRGIEVVDIAA 4103
Query: 291 GGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLV 350
GG HS +T+ G L+ WG + G+LG G E+ +R I I
Sbjct: 4104 GGAHSACITAAGDLFTWGKGRYGRLGHGDSEDQLKPKLVEALQGYRVIDI---------- 4153
Query: 351 ACGH--SHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGH 407
ACG + TL D + WG YG+ S P +D V K+ G
Sbjct: 4154 ACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTDLGVVKVECGSQF 4213
Query: 408 SAVL 411
S L
Sbjct: 4214 SVAL 4217
Score = 213 (80.0 bits), Expect = 1.1e-10, Sum P(3) = 1.1e-10
Identities = 81/274 (29%), Positives = 118/274 (43%)
Query: 56 CPAGANSRWLDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEF 115
C AN + IAC + ++ +G ++T N LG P+ V+ L S
Sbjct: 446 CEGLANLGVVQIACAEKRFLILSRNGRVYTQAYNS-DTLG---------PQLVQSLASRN 495
Query: 116 VKSISC---GAHCTAAIAEPREND-GTISTSRLWVWGQNQGSNFPRLFWGAFTPNTI--- 168
+ I+ G H A A G RL G P+L A +
Sbjct: 496 IVKIAAHSDGHHYLALSANGEVFSWGCGDGGRLG-HGDTVPLEEPKLI-SALSGKQAGKH 553
Query: 169 ICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELE 228
+ ++CGS + A++ G L WG YG+LG G + E P ++ G K L
Sbjct: 554 VVHIACGSTYSAAITAEGELYTWGRGNYGRLGHG-SSEDQTIPMLVTGL-KGL------- 604
Query: 229 KITQVSCG--EYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIK 286
K+ VSCG + + AV+ENG+V++WG G G+LG G K P+ + L + I
Sbjct: 605 KVIDVSCGSGDAQTLAVTENGQVWSWGDGDYGKLGRGG-SDGCKT--PKLIEKLQDLDIV 661
Query: 287 DVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQ 320
V CG S ALT G +Y WG +LG G +
Sbjct: 662 KVRCGSQFSIALTKDGQVYTWGKGDNQRLGHGTE 695
Score = 195 (73.7 bits), Expect = 8.4e-09, Sum P(3) = 8.4e-09
Identities = 52/184 (28%), Positives = 84/184 (45%)
Query: 229 KITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKE--LLPRRVVALDGIFIK 286
++ ++ G HSA ++ G+++TWG G G+LGH GD E L P+ V AL G +
Sbjct: 4097 EVVDIAAGGAHSACITAAGDLFTWGKGRYGRLGH-----GDSEDQLKPKLVEALQGYRVI 4151
Query: 287 DVACGG--VHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVP 344
D+ACG + LT +++WG G+LG G +P + D+ +
Sbjct: 4152 DIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGC--KVPMKIDS--------LTD 4201
Query: 345 NGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAA 403
GV V CG ++ + G ++ WG Y + + + P V G+ V +A
Sbjct: 4202 LGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIAT 4261
Query: 404 GGGH 407
G H
Sbjct: 4262 GSLH 4265
Score = 192 (72.6 bits), Expect = 1.8e-08, Sum P(3) = 1.8e-08
Identities = 51/185 (27%), Positives = 89/185 (48%)
Query: 229 KITQVSCG--EYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIK 286
++ QV+CG + + A+++ G V++WG G G+LG + + +P+ + L+G +
Sbjct: 3156 RVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCN---IPQNIERLNGQGVC 3212
Query: 287 DVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNG 346
+ CG S ALT G ++ WG +LG G +D + R ++ G
Sbjct: 3213 QIECGAQFSLALTKSGVVWTWGKGDYFRLGHG------------TDVHVRKPQVVEGLRG 3260
Query: 347 VQLV--ACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAA 403
++V A G H L G+++ WG N +GQ N +T P+ V G+ + ++A
Sbjct: 3261 KKIVHVAVGALHCLAVTDTGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVAC 3320
Query: 404 GGGHS 408
G HS
Sbjct: 3321 GSSHS 3325
Score = 177 (67.4 bits), Expect = 7.4e-07, Sum P(3) = 7.4e-07
Identities = 50/150 (33%), Positives = 69/150 (46%)
Query: 229 KITQVSCG--EYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIK 286
K+ VSCG + + AV+ENG+V++WG G G+LG G K P+ + L + I
Sbjct: 605 KVIDVSCGSGDAQTLAVTENGQVWSWGDGDYGKLGRGG-SDGCKT--PKLIEKLQDLDIV 661
Query: 287 DVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNG 346
V CG S ALT G +Y WG +LG G + E Y + + L
Sbjct: 662 KVRCGSQFSIALTKDGQVYTWGKGDNQRLGHGTE---------EHVRYPKLLEGLKGKKV 712
Query: 347 VQLVACGHSHTLVYMRDGRIHGWGYNSYGQ 376
+ VA G +H L D +H WG N Q
Sbjct: 713 ID-VAAGSTHCLALTEDSEVHSWGSNDQCQ 741
Score = 166 (63.5 bits), Expect = 1.1e-05, Sum P(3) = 1.1e-05
Identities = 48/142 (33%), Positives = 68/142 (47%)
Query: 221 LDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVAL 280
+D +L + +V CG S A++++G VYTWG G +LGH S D PR+V L
Sbjct: 4196 IDSLTDLG-VVKVECGSQFSVALTKSGAVYTWGKGDYHRLGH---GSDDHVRRPRQVQGL 4251
Query: 281 DGIFIKDVACGGVHS--CALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNI 338
G + +A G +H C G +Y WG + GQLG G T + P R +
Sbjct: 4252 QGKKVIAIATGSLHCVCCTEDGLGEVYTWGDNDEGQLGDGT-TNAIQR-P-------RLV 4302
Query: 339 PILVVPNGVQLVACGHSHTLVY 360
L + VACG +HTL +
Sbjct: 4303 AALQGKK-INRVACGSAHTLAW 4323
Score = 162 (62.1 bits), Expect = 4.1e-05, Sum P(4) = 4.1e-05
Identities = 44/131 (33%), Positives = 64/131 (48%)
Query: 230 ITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVA 289
+ Q+ CG S A++++G V+TWG G +LGH + K P+ V L G I VA
Sbjct: 3211 VCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGTDVHVRK---PQVVEGLRGKKIVHVA 3267
Query: 290 CGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQL 349
G +H A+T G +YAWG + GQ G G T N T + + +
Sbjct: 3268 VGALHCLAVTDTGQVYAWGDNDHGQQGNGTTT------VNRKPTLVQGLE----GQKITR 3317
Query: 350 VACGHSHTLVY 360
VACG SH++ +
Sbjct: 3318 VACGSSHSVAW 3328
Score = 153 (58.9 bits), Expect = 0.00026, Sum P(3) = 0.00025
Identities = 51/195 (26%), Positives = 88/195 (45%)
Query: 221 LDEAPELEKITQVSCG--EYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVV 278
L EA + ++ ++CG + + ++++ V++WG G G+LG G K +P ++
Sbjct: 4141 LVEALQGYRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG-SDGCK--VPMKID 4197
Query: 279 ALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNI 338
+L + + V CG S ALT GA+Y WG +LG G SD + R
Sbjct: 4198 SLTDLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHG------------SDDHVRRP 4245
Query: 339 PILVVPNGVQLVAC--GHSHTLVYMRDG--RIHGWGYNSYGQAANEKSTYAWYPSPVDWC 394
+ G +++A G H + DG ++ WG N GQ + + P V
Sbjct: 4246 RQVQGLQGKKVIAIATGSLHCVCCTEDGLGEVYTWGDNDEGQLGDGTTNAIQRPRLVAAL 4305
Query: 395 VGE-VRKLAAGGGHS 408
G+ + ++A G H+
Sbjct: 4306 QGKKINRVACGSAHT 4320
Score = 44 (20.5 bits), Expect = 8.4e-09, Sum P(3) = 8.4e-09
Identities = 16/48 (33%), Positives = 22/48 (45%)
Query: 171 QVSCGSVHVVALSEC---GLLQAWGYNEYGQLGRGITCEGLQGPRVIK 215
Q S + H +L E GL+ W Y Y + I CEGL V++
Sbjct: 412 QCSSPTSHKGSLQEVIAWGLI-GWKY--YANVSGPIQCEGLANLGVVQ 456
Score = 43 (20.2 bits), Expect = 6.0e-23, Sum P(3) = 6.0e-23
Identities = 5/12 (41%), Positives = 10/12 (83%)
Query: 360 YMRDGRIHGWGY 371
++ DG ++GWG+
Sbjct: 3696 FISDGSVNGWGW 3707
Score = 37 (18.1 bits), Expect = 6.0e-23, Sum P(3) = 6.0e-23
Identities = 6/12 (50%), Positives = 9/12 (75%)
Query: 404 GGGHSAVLADAC 415
GGG+S +A+ C
Sbjct: 4486 GGGYSESIAEMC 4497
Score = 37 (18.1 bits), Expect = 6.0e-23, Sum P(3) = 6.0e-23
Identities = 6/12 (50%), Positives = 10/12 (83%)
Query: 446 SEALARLCERLR 457
SE++A +CE L+
Sbjct: 4490 SESIAEMCEELQ 4501
>UNIPROTKB|E1C8K2 [details] [associations]
symbol:HERC2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0020037 "heme binding"
evidence=IEA] Pfam:PF00632 InterPro:IPR000433 InterPro:IPR000569
InterPro:IPR001199 InterPro:IPR009060 InterPro:IPR010606
Pfam:PF00173 Pfam:PF00569 Pfam:PF06701 PROSITE:PS01357
PROSITE:PS50135 PROSITE:PS50237 PROSITE:PS50255 PROSITE:PS51416
SMART:SM00119 SMART:SM00291 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0046872 GO:GO:0008270 GO:GO:0020037 GO:GO:0005622
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
Gene3D:3.10.120.10 SUPFAM:SSF55856 InterPro:IPR008979
SUPFAM:SSF49785 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 InterPro:IPR004939 Pfam:PF03256 PROSITE:PS51284
SUPFAM:SSF46934 Gene3D:2.30.30.30 InterPro:IPR021097
InterPro:IPR014722 Pfam:PF11515 SUPFAM:SSF56204
GeneTree:ENSGT00700000104208 EMBL:AADN02017653 IPI:IPI00818548
Ensembl:ENSGALT00000036596 ArrayExpress:E1C8K2 Uniprot:E1C8K2
Length = 4841
Score = 316 (116.3 bits), Expect = 6.0e-23, Sum P(3) = 6.0e-23
Identities = 92/284 (32%), Positives = 135/284 (47%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
I+ WG G G+ G ++ K P L A R DIACG H+AA+ S G
Sbjct: 3072 IFSWG---EGDDGKLGHFSRMNCDK---PRLI--EALKTKRIRDIACGSSHSAAITSSGE 3123
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREN------D 136
L+TWG E+G+LG G + P+ VK L V ++CG+ +A E D
Sbjct: 3124 LYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGD 3183
Query: 137 GTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEY 196
G +L G ++G N P+ +CQ+ CG+ +AL++ G++ WG +Y
Sbjct: 3184 GDFG--KLGRGG-SEGCNIPQNIERLNGQG--VCQIECGAQFSLALTKSGVVWTWGKGDY 3238
Query: 197 GQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGS 256
+LG G T ++ P+V++G +KI V+ G H AV++ G+VY WG
Sbjct: 3239 FRLGHG-TDVHVRKPQVVEGLRG--------KKIVHVAVGALHCLAVTDTGQVYAWGDND 3289
Query: 257 VGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTS 300
GQ G+ + K P V L+G I VACG HS A T+
Sbjct: 3290 HGQQGNGTTTVNRK---PTLVQGLEGQKITRVACGSSHSVAWTT 3330
Score = 300 (110.7 bits), Expect = 4.0e-21, Sum P(2) = 4.0e-21
Identities = 93/298 (31%), Positives = 138/298 (46%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
+ ++ +Y WG G+ G R R P+ + L G +DIA G H+A
Sbjct: 4059 LSSEGEVYSWGEAEDGKLGHGNRSPCDR-PRVIE-SLRGIEV------VDIAAGGAHSAC 4110
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND 136
+ + G LFTWG +G+LG G E + P+ V+ LQ V I+CG+ + +D
Sbjct: 4111 ITAAGDLFTWGKGRYGRLGHGDSEDQLKPKLVEALQGYRVIDIACGSGDAQTLC--LTDD 4168
Query: 137 GTISTSRLWVWGQNQGSNFPRLFW-GAFTPNTI-------ICQVSCGSVHVVALSECGLL 188
T+ W WG R G P I + +V CGS VAL++ G +
Sbjct: 4169 DTV-----WSWGDGDYGKLGRGGSDGCKVPMKIDSLTDLGVVKVECGSQFSVALTKSGAV 4223
Query: 189 QAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENG- 247
WG +Y +LG G + + ++ PR ++G + +K+ ++ G H +E+G
Sbjct: 4224 YTWGKGDYHRLGHG-SDDHVRRPRQVQGL--------QGKKVIAIATGSLHCVCCTEDGL 4274
Query: 248 -EVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCAL-TSKGA 303
EVYTWG GQLG + + + PR V AL G I VACG H+ A TSK A
Sbjct: 4275 GEVYTWGDNDEGQLGDGTTNAIQR---PRLVAALQGKKINRVACGSAHTLAWSTSKPA 4329
Score = 299 (110.3 bits), Expect = 1.1e-20, Sum P(3) = 1.1e-20
Identities = 91/311 (29%), Positives = 152/311 (48%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
+ + +Y G +G+ G + IP+Q+ + + + + G H A
Sbjct: 3011 VTVEGKVYACGEATNGRLGLGISSGTVPIPRQIT-----ALSNYVVKKVAVHSGGRHAMA 3065
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND 136
+ DG +F+WG + G+LG + P ++ L+++ ++ I+CG+ +AAI +
Sbjct: 3066 LTVDGKIFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAIT----SS 3121
Query: 137 GTISTSRLWVWGQ-NQGSNFPRL---FWGAFTPNTIICQVSCGS--VHVVALSECGLLQA 190
G + T L +G+ G N +L + +I QV+CGS +AL++ GL+ +
Sbjct: 3122 GELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVI-QVACGSRDAQTLALTDEGLVFS 3180
Query: 191 WGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVY 250
WG ++G+LGRG + EG P+ I E + + Q+ CG S A++++G V+
Sbjct: 3181 WGDGDFGKLGRGGS-EGCNIPQNI--------ERLNGQGVCQIECGAQFSLALTKSGVVW 3231
Query: 251 TWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGS 310
TWG G +LGH + K P+ V L G I VA G +H A+T G +YAWG +
Sbjct: 3232 TWGKGDYFRLGHGTDVHVRK---PQVVEGLRGKKIVHVAVGALHCLAVTDTGQVYAWGDN 3288
Query: 311 QAGQLGLGPQT 321
GQ G G T
Sbjct: 3289 DHGQQGNGTTT 3299
Score = 286 (105.7 bits), Expect = 4.5e-19, Sum P(3) = 4.5e-19
Identities = 83/255 (32%), Positives = 132/255 (51%)
Query: 70 GHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSE----FVKSISCGAHC 125
GH H A++++G +F+WG + G+LG G + P+ + L + V I+CG+
Sbjct: 505 GH-HYLALSANGEVFSWGCGDGGRLGHGDTVPLEEPKLISALSGKQAGKHVVHIACGSTY 563
Query: 126 TAAIAEPRE--NDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGS--VHVVA 181
+AAI E G + RL G ++ P L G + VSCGS +A
Sbjct: 564 SAAITAEGELYTWGRGNYGRLG-HGSSEDQTIPMLVTGL--KGLKVIDVSCGSGDAQTLA 620
Query: 182 LSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSA 241
++E G + +WG +YG+LGRG + +G + P++I+ K D L+ I +V CG S
Sbjct: 621 VTENGQVWSWGDGDYGKLGRGGS-DGCKTPKLIE---KLQD----LD-IVKVRCGSQFSI 671
Query: 242 AVSENGEVYTWGLGSVGQLGHCSLQSGDKELL--PRRVVALDGIFIKDVACGGVHSCALT 299
A++++G+VYTWG G +LGH G +E + P+ + L G + DVA G H ALT
Sbjct: 672 ALTKDGQVYTWGKGDNQRLGH-----GTEEHVRYPKLLEGLKGKKVIDVAAGSTHCLALT 726
Query: 300 SKGALYAWGGSQAGQ 314
+++WG + Q
Sbjct: 727 EDSEVHSWGSNDQCQ 741
Score = 284 (105.0 bits), Expect = 3.2e-19, Sum P(2) = 3.2e-19
Identities = 87/303 (28%), Positives = 141/303 (46%)
Query: 23 IYVWGYNHSGQTGRKGRE-RQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDG 81
IY WG+NH GQ G G E ++++P P C A A R + + G + AV +DG
Sbjct: 3959 IYGWGHNHRGQLG--GIEGAKVKVPT---P----CEALATLRPVQLIGGEQTLFAVTADG 4009
Query: 82 TLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSI---SCGAHCTAAIAEPREND-G 137
L+ G G+LG G E P ++ +Q F+K + S G HC A +E G
Sbjct: 4010 KLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWG 4069
Query: 138 TISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYG 197
+L G + PR+ + ++ G H ++ G L WG YG
Sbjct: 4070 EAEDGKLG-HGNRSPCDRPRVIESL--RGIEVVDIAAGGAHSACITAAGDLFTWGKGRYG 4126
Query: 198 QLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCG--EYHSAAVSENGEVYTWGLG 255
+LG G + + L+ P+++ EA + ++ ++CG + + ++++ V++WG G
Sbjct: 4127 RLGHGDSEDQLK-PKLV--------EALQGYRVIDIACGSGDAQTLCLTDDDTVWSWGDG 4177
Query: 256 SVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQL 315
G+LG G K +P ++ +L + + V CG S ALT GA+Y WG +L
Sbjct: 4178 DYGKLGRGG-SDGCK--VPMKIDSLTDLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRL 4234
Query: 316 GLG 318
G G
Sbjct: 4235 GHG 4237
Score = 283 (104.7 bits), Expect = 4.2e-19, Sum P(2) = 4.2e-19
Identities = 94/311 (30%), Positives = 142/311 (45%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPP--ELFGCPAGANSRWLDIACGHEHT 74
+ A +Y GY G+ G G E + P L +F NS G +H
Sbjct: 4005 VTADGKLYATGYGAGGRLGIGGTE-SVSTPTLLESIQHVFIKKVAVNS-------GGKHC 4056
Query: 75 AAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQS-EFVKSISCGAH--CTAAIAE 131
A++S+G +++WG E G+LG G P ++ L+ E V + GAH C A +
Sbjct: 4057 LALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDIAAGGAHSACITAAGD 4116
Query: 132 PRENDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGS--VHVVALSECGLLQ 189
G RL G ++ P+L A +I ++CGS + L++ +
Sbjct: 4117 -LFTWGKGRYGRLG-HGDSEDQLKPKLV-EALQGYRVI-DIACGSGDAQTLCLTDDDTVW 4172
Query: 190 AWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEV 249
+WG +YG+LGRG + +G + P I D +L + +V CG S A++++G V
Sbjct: 4173 SWGDGDYGKLGRGGS-DGCKVPMKI-------DSLTDLG-VVKVECGSQFSVALTKSGAV 4223
Query: 250 YTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHS--CALTSKGALYAW 307
YTWG G +LGH S D PR+V L G + +A G +H C G +Y W
Sbjct: 4224 YTWGKGDYHRLGH---GSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGLGEVYTW 4280
Query: 308 GGSQAGQLGLG 318
G + GQLG G
Sbjct: 4281 GDNDEGQLGDG 4291
Score = 274 (101.5 bits), Expect = 1.2e-17, Sum P(3) = 1.2e-17
Identities = 90/293 (30%), Positives = 138/293 (47%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
+ A ++ WG G+ G G L PK L L G AG + + IACG ++AA
Sbjct: 511 LSANGEVFSWGCGDGGRLGH-GDTVPLEEPK-LISALSGKQAGKHV--VHIACGSTYSAA 566
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND 136
+ ++G L+TWG +G+LG G+ E + P V L+ V +SCG+ +A EN
Sbjct: 567 ITAEGELYTWGRGNYGRLGHGSSEDQTIPMLVTGLKGLKVIDVSCGSGDAQTLAVT-EN- 624
Query: 137 GTISTSRLWVWGQNQGSNFPRLFW-GAFTPNTI-------ICQVSCGSVHVVALSECGLL 188
++W WG R G TP I I +V CGS +AL++ G +
Sbjct: 625 -----GQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDIVKVRCGSQFSIALTKDGQV 679
Query: 189 QAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGE 248
WG + +LG G T E ++ P++++G +K+ V+ G H A++E+ E
Sbjct: 680 YTWGKGDNQRLGHG-TEEHVRYPKLLEGLKG--------KKVIDVAAGSTHCLALTEDSE 730
Query: 249 VYTWGLGSVGQLGHC-SLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTS 300
V++WG S Q H +L+ E P + LD I +ACG S A +S
Sbjct: 731 VHSWG--SNDQCQHFDTLRITKPE--PAALPGLDTKHIVGIACGPAQSFAWSS 779
Score = 271 (100.5 bits), Expect = 1.0e-17, Sum P(2) = 1.0e-17
Identities = 74/276 (26%), Positives = 127/276 (46%)
Query: 143 RLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRG 202
R++ N + P+L + N + H +ALS G + +WG + G+LG G
Sbjct: 472 RVYTQAYNSDTLGPQLVQSLASRNIVKIAAHSDGHHYLALSANGEVFSWGCGDGGRLGHG 531
Query: 203 ITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGH 262
T L+ P++I L + + ++CG +SAA++ GE+YTWG G+ G+LGH
Sbjct: 532 DTVP-LEEPKLISA----LSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGH 586
Query: 263 CSLQSGDKELLPRRVVALDGIFIKDVACGG--VHSCALTSKGALYAWGGSQAGQLGLGPQ 320
S + + +P V L G+ + DV+CG + A+T G +++WG G+LG G
Sbjct: 587 ---GSSEDQTIPMLVTGLKGLKVIDVSCGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGS 643
Query: 321 T--RSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAA 378
++ LI D + V CG ++ +DG+++ WG +
Sbjct: 644 DGCKTPKLIEKLQDL------------DIVKVRCGSQFSIALTKDGQVYTWGKGDNQRLG 691
Query: 379 NEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLAD 413
+ + YP ++ G+ V +AAG H L +
Sbjct: 692 HGTEEHVRYPKLLEGLKGKKVIDVAAGSTHCLALTE 727
Score = 268 (99.4 bits), Expect = 2.3e-17, Sum P(2) = 2.3e-17
Identities = 88/289 (30%), Positives = 143/289 (49%)
Query: 134 ENDGTISTSRLWVWGQNQ-----GSNFPRLFWGAF--TPNTI-ICQVSCGSVHVVALSEC 185
E+ TI T +++VWG N G ++ +F T + + + QV+ GS + A++
Sbjct: 2956 ESAATIRT-KVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVE 3014
Query: 186 GLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSE 245
G + A G G+LG GI+ + PR I + ++ ++K+ V G H+ A++
Sbjct: 3015 GKVYACGEATNGRLGLGISSGTVPIPRQITALSNYV-----VKKVA-VHSGGRHAMALTV 3068
Query: 246 NGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALY 305
+G++++WG G G+LGH S + DK PR + AL I+D+ACG HS A+TS G LY
Sbjct: 3069 DGKIFSWGEGDDGKLGHFSRMNCDK---PRLIEALKTKRIRDIACGSSHSAAITSSGELY 3125
Query: 306 AWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGH--SHTLVYMRD 363
WG + G+LG G T L P + + +L+ +Q VACG + TL +
Sbjct: 3126 TWGLGEYGRLGHGDNTTQ--LKP-------KMVKVLLGHRVIQ-VACGSRDAQTLALTDE 3175
Query: 364 GRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVL 411
G + WG +G+ S P ++ G+ V ++ G S L
Sbjct: 3176 GLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLAL 3224
Score = 253 (94.1 bits), Expect = 3.6e-15, Sum P(3) = 3.6e-15
Identities = 84/307 (27%), Positives = 141/307 (45%)
Query: 20 KSAIYVWGYNHSGQTGR-KGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVA 78
++ ++VWG N Q G KG + +++P F A + + +A G + AV
Sbjct: 2962 RTKVFVWGLNDKDQLGGLKGSK--IKVPS------FSETLSALNV-VQVAGGSKSLFAVT 3012
Query: 79 SDGTLFTWGANEFGQLGDGTEEGRKH-PEKVKQLQSEFVKSI---SCGAHCTAAIAEPRE 134
+G ++ G G+LG G G P ++ L + VK + S G H A + +
Sbjct: 3013 VEGKVYACGEATNGRLGLGISSGTVPIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKI 3072
Query: 135 ND-GTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGY 193
G +L + + + PRL T I ++CGS H A++ G L WG
Sbjct: 3073 FSWGEGDDGKLGHFSR-MNCDKPRLIEALKTKR--IRDIACGSSHSAAITSSGELYTWGL 3129
Query: 194 NEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCG--EYHSAAVSENGEVYT 251
EYG+LG G L+ P+++K L ++ QV+CG + + A+++ G V++
Sbjct: 3130 GEYGRLGHGDNTTQLK-PKMVK---VLLGH-----RVIQVACGSRDAQTLALTDEGLVFS 3180
Query: 252 WGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQ 311
WG G G+LG + + +P+ + L+G + + CG S ALT G ++ WG
Sbjct: 3181 WGDGDFGKLGRGGSEGCN---IPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGD 3237
Query: 312 AGQLGLG 318
+LG G
Sbjct: 3238 YFRLGHG 3244
Score = 240 (89.5 bits), Expect = 3.3e-14, Sum P(2) = 3.3e-14
Identities = 88/308 (28%), Positives = 132/308 (42%)
Query: 74 TAAVASDGTLFTWGANEFGQLGDGTEEGR-KHPEKVKQLQSEFVKSISCGAHCTAAIAEP 132
T + GT++ WG N GQLG G E + K P + L + + G A+
Sbjct: 3950 TLSAGGSGTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTAD 4008
Query: 133 RE--NDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQA 190
+ G + RL + G S P L V+ G H +ALS G + +
Sbjct: 4009 GKLYATGYGAGGRLGIGGTESVST-PTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYS 4067
Query: 191 WGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVY 250
WG E G+LG G PRVI+ ++ ++ G HSA ++ G+++
Sbjct: 4068 WGEAEDGKLGHG-NRSPCDRPRVIESLRGI--------EVVDIAAGGAHSACITAAGDLF 4118
Query: 251 TWGLGSVGQLGHCSLQSGDKE--LLPRRVVALDGIFIKDVACGG--VHSCALTSKGALYA 306
TWG G G+LGH GD E L P+ V AL G + D+ACG + LT +++
Sbjct: 4119 TWGKGRYGRLGH-----GDSEDQLKPKLVEALQGYRVIDIACGSGDAQTLCLTDDDTVWS 4173
Query: 307 WGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQL-VACGHSHTLVYMRDGR 365
WG G+LG G +P + D+ ++ ++ V G Q VA S + G
Sbjct: 4174 WGDGDYGKLGRGGSDGC--KVPMKIDS-LTDLGVVKVECGSQFSVALTKSGAVYTWGKGD 4230
Query: 366 IHGWGYNS 373
H G+ S
Sbjct: 4231 YHRLGHGS 4238
Score = 225 (84.3 bits), Expect = 1.5e-12, Sum P(2) = 1.5e-12
Identities = 74/244 (30%), Positives = 108/244 (44%)
Query: 171 QVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKI 230
Q+ G + A++ G L A GY G+LG G T E + P +++ ++K+
Sbjct: 3994 QLIGGEQTLFAVTADGKLYATGYGAGGRLGIGGT-ESVSTPTLLESIQHVF-----IKKV 4047
Query: 231 TQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVAC 290
V+ G H A+S GEVY+WG G+LGH + D+ PR + +L GI + D+A
Sbjct: 4048 A-VNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDR---PRVIESLRGIEVVDIAA 4103
Query: 291 GGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLV 350
GG HS +T+ G L+ WG + G+LG G E+ +R I I
Sbjct: 4104 GGAHSACITAAGDLFTWGKGRYGRLGHGDSEDQLKPKLVEALQGYRVIDI---------- 4153
Query: 351 ACGH--SHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGH 407
ACG + TL D + WG YG+ S P +D V K+ G
Sbjct: 4154 ACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTDLGVVKVECGSQF 4213
Query: 408 SAVL 411
S L
Sbjct: 4214 SVAL 4217
Score = 213 (80.0 bits), Expect = 1.1e-10, Sum P(3) = 1.1e-10
Identities = 81/274 (29%), Positives = 118/274 (43%)
Query: 56 CPAGANSRWLDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEF 115
C AN + IAC + ++ +G ++T N LG P+ V+ L S
Sbjct: 446 CEGLANLGVVQIACAEKRFLILSRNGRVYTQAYNS-DTLG---------PQLVQSLASRN 495
Query: 116 VKSISC---GAHCTAAIAEPREND-GTISTSRLWVWGQNQGSNFPRLFWGAFTPNTI--- 168
+ I+ G H A A G RL G P+L A +
Sbjct: 496 IVKIAAHSDGHHYLALSANGEVFSWGCGDGGRLG-HGDTVPLEEPKLI-SALSGKQAGKH 553
Query: 169 ICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELE 228
+ ++CGS + A++ G L WG YG+LG G + E P ++ G K L
Sbjct: 554 VVHIACGSTYSAAITAEGELYTWGRGNYGRLGHG-SSEDQTIPMLVTGL-KGL------- 604
Query: 229 KITQVSCG--EYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIK 286
K+ VSCG + + AV+ENG+V++WG G G+LG G K P+ + L + I
Sbjct: 605 KVIDVSCGSGDAQTLAVTENGQVWSWGDGDYGKLGRGG-SDGCKT--PKLIEKLQDLDIV 661
Query: 287 DVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQ 320
V CG S ALT G +Y WG +LG G +
Sbjct: 662 KVRCGSQFSIALTKDGQVYTWGKGDNQRLGHGTE 695
Score = 195 (73.7 bits), Expect = 8.4e-09, Sum P(3) = 8.4e-09
Identities = 52/184 (28%), Positives = 84/184 (45%)
Query: 229 KITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKE--LLPRRVVALDGIFIK 286
++ ++ G HSA ++ G+++TWG G G+LGH GD E L P+ V AL G +
Sbjct: 4097 EVVDIAAGGAHSACITAAGDLFTWGKGRYGRLGH-----GDSEDQLKPKLVEALQGYRVI 4151
Query: 287 DVACGG--VHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVP 344
D+ACG + LT +++WG G+LG G +P + D+ +
Sbjct: 4152 DIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGC--KVPMKIDS--------LTD 4201
Query: 345 NGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAA 403
GV V CG ++ + G ++ WG Y + + + P V G+ V +A
Sbjct: 4202 LGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIAT 4261
Query: 404 GGGH 407
G H
Sbjct: 4262 GSLH 4265
Score = 192 (72.6 bits), Expect = 1.8e-08, Sum P(3) = 1.8e-08
Identities = 51/185 (27%), Positives = 89/185 (48%)
Query: 229 KITQVSCG--EYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIK 286
++ QV+CG + + A+++ G V++WG G G+LG + + +P+ + L+G +
Sbjct: 3156 RVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCN---IPQNIERLNGQGVC 3212
Query: 287 DVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNG 346
+ CG S ALT G ++ WG +LG G +D + R ++ G
Sbjct: 3213 QIECGAQFSLALTKSGVVWTWGKGDYFRLGHG------------TDVHVRKPQVVEGLRG 3260
Query: 347 VQLV--ACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAA 403
++V A G H L G+++ WG N +GQ N +T P+ V G+ + ++A
Sbjct: 3261 KKIVHVAVGALHCLAVTDTGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVAC 3320
Query: 404 GGGHS 408
G HS
Sbjct: 3321 GSSHS 3325
Score = 177 (67.4 bits), Expect = 7.4e-07, Sum P(3) = 7.4e-07
Identities = 50/150 (33%), Positives = 69/150 (46%)
Query: 229 KITQVSCG--EYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIK 286
K+ VSCG + + AV+ENG+V++WG G G+LG G K P+ + L + I
Sbjct: 605 KVIDVSCGSGDAQTLAVTENGQVWSWGDGDYGKLGRGG-SDGCKT--PKLIEKLQDLDIV 661
Query: 287 DVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNG 346
V CG S ALT G +Y WG +LG G + E Y + + L
Sbjct: 662 KVRCGSQFSIALTKDGQVYTWGKGDNQRLGHGTE---------EHVRYPKLLEGLKGKKV 712
Query: 347 VQLVACGHSHTLVYMRDGRIHGWGYNSYGQ 376
+ VA G +H L D +H WG N Q
Sbjct: 713 ID-VAAGSTHCLALTEDSEVHSWGSNDQCQ 741
Score = 166 (63.5 bits), Expect = 1.1e-05, Sum P(3) = 1.1e-05
Identities = 48/142 (33%), Positives = 68/142 (47%)
Query: 221 LDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVAL 280
+D +L + +V CG S A++++G VYTWG G +LGH S D PR+V L
Sbjct: 4196 IDSLTDLG-VVKVECGSQFSVALTKSGAVYTWGKGDYHRLGH---GSDDHVRRPRQVQGL 4251
Query: 281 DGIFIKDVACGGVHS--CALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNI 338
G + +A G +H C G +Y WG + GQLG G T + P R +
Sbjct: 4252 QGKKVIAIATGSLHCVCCTEDGLGEVYTWGDNDEGQLGDGT-TNAIQR-P-------RLV 4302
Query: 339 PILVVPNGVQLVACGHSHTLVY 360
L + VACG +HTL +
Sbjct: 4303 AALQGKK-INRVACGSAHTLAW 4323
Score = 162 (62.1 bits), Expect = 4.1e-05, Sum P(4) = 4.1e-05
Identities = 44/131 (33%), Positives = 64/131 (48%)
Query: 230 ITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVA 289
+ Q+ CG S A++++G V+TWG G +LGH + K P+ V L G I VA
Sbjct: 3211 VCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGTDVHVRK---PQVVEGLRGKKIVHVA 3267
Query: 290 CGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQL 349
G +H A+T G +YAWG + GQ G G T N T + + +
Sbjct: 3268 VGALHCLAVTDTGQVYAWGDNDHGQQGNGTTT------VNRKPTLVQGLE----GQKITR 3317
Query: 350 VACGHSHTLVY 360
VACG SH++ +
Sbjct: 3318 VACGSSHSVAW 3328
Score = 153 (58.9 bits), Expect = 0.00026, Sum P(3) = 0.00025
Identities = 51/195 (26%), Positives = 88/195 (45%)
Query: 221 LDEAPELEKITQVSCG--EYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVV 278
L EA + ++ ++CG + + ++++ V++WG G G+LG G K +P ++
Sbjct: 4141 LVEALQGYRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG-SDGCK--VPMKID 4197
Query: 279 ALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNI 338
+L + + V CG S ALT GA+Y WG +LG G SD + R
Sbjct: 4198 SLTDLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHG------------SDDHVRRP 4245
Query: 339 PILVVPNGVQLVAC--GHSHTLVYMRDG--RIHGWGYNSYGQAANEKSTYAWYPSPVDWC 394
+ G +++A G H + DG ++ WG N GQ + + P V
Sbjct: 4246 RQVQGLQGKKVIAIATGSLHCVCCTEDGLGEVYTWGDNDEGQLGDGTTNAIQRPRLVAAL 4305
Query: 395 VGE-VRKLAAGGGHS 408
G+ + ++A G H+
Sbjct: 4306 QGKKINRVACGSAHT 4320
Score = 44 (20.5 bits), Expect = 8.4e-09, Sum P(3) = 8.4e-09
Identities = 16/48 (33%), Positives = 22/48 (45%)
Query: 171 QVSCGSVHVVALSEC---GLLQAWGYNEYGQLGRGITCEGLQGPRVIK 215
Q S + H +L E GL+ W Y Y + I CEGL V++
Sbjct: 412 QCSSPTSHKGSLQEVIAWGLI-GWKY--YANVSGPIQCEGLANLGVVQ 456
Score = 43 (20.2 bits), Expect = 6.0e-23, Sum P(3) = 6.0e-23
Identities = 5/12 (41%), Positives = 10/12 (83%)
Query: 360 YMRDGRIHGWGY 371
++ DG ++GWG+
Sbjct: 3696 FISDGSVNGWGW 3707
Score = 37 (18.1 bits), Expect = 6.0e-23, Sum P(3) = 6.0e-23
Identities = 6/12 (50%), Positives = 9/12 (75%)
Query: 404 GGGHSAVLADAC 415
GGG+S +A+ C
Sbjct: 4486 GGGYSESIAEMC 4497
Score = 37 (18.1 bits), Expect = 6.0e-23, Sum P(3) = 6.0e-23
Identities = 6/12 (50%), Positives = 10/12 (83%)
Query: 446 SEALARLCERLR 457
SE++A +CE L+
Sbjct: 4490 SESIAEMCEELQ 4501
>ZFIN|ZDB-GENE-070912-423 [details] [associations]
symbol:rpgra "retinitis pigmentosa GTPase regulator
a" species:7955 "Danio rerio" [GO:0072001 "renal system
development" evidence=IMP] INTERPRO:IPR000408 Pfam:PF00415
ZFIN:ZDB-GENE-070912-423 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012
GO:GO:0072001 GeneTree:ENSGT00700000104160 EMBL:BX571713
IPI:IPI00955233 RefSeq:XP_003199276.1 Ensembl:ENSDART00000079095
GeneID:571327 KEGG:dre:571327 CTD:571327 NextBio:20890513
Bgee:F1QV77 Uniprot:F1QV77
Length = 1698
Score = 296 (109.3 bits), Expect = 9.2e-23, P = 9.2e-23
Identities = 91/254 (35%), Positives = 123/254 (48%)
Query: 67 IACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCT 126
I+CG H+A V G LF +G N GQLG + P VK L+ E +S++CG T
Sbjct: 39 ISCGQSHSAFVTEQGRLFVFGDNNRGQLGLQIKGPVTKPVCVKVLKGERAQSVACGTDHT 98
Query: 127 AAIAEPRE--NDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSE 184
E G S +L + N +F RL F I +S G AL+E
Sbjct: 99 LVSTSQGEILAAGGNSDGQLGLGHCNDSISFQRL--RPFCDYAPIKLLSAGDHTSAALTE 156
Query: 185 CGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVS 244
G L WG N GQLG G L + G + I VSCG HSA V+
Sbjct: 157 DGRLFLWGDNSAGQLGFGNDSHALLPKELNMG-----------QSIHWVSCGYRHSALVT 205
Query: 245 ENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGAL 304
++G+VY++G + G+LG + Q + P+RV +L + VACGG H+ ALT + L
Sbjct: 206 DSGDVYSFGESADGRLGLSAHQLANHSY-PQRVESLHSVL--QVACGGKHTLALT-EDEL 261
Query: 305 YAWGGSQAGQLGLG 318
Y +GG + GQLGLG
Sbjct: 262 YCFGGGEFGQLGLG 275
Score = 251 (93.4 bits), Expect = 1.0e-17, P = 1.0e-17
Identities = 91/307 (29%), Positives = 137/307 (44%)
Query: 67 IACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEF-VKSISCGAHC 125
+ACG +HT S G + G N GQLG G ++++ +K +S G H
Sbjct: 91 VACGTDHTLVSTSQGEILAAGGNSDGQLGLGHCNDSISFQRLRPFCDYAPIKLLSAGDHT 150
Query: 126 TAAIAEPRENDGTISTSRLWVWGQNQ------GSNFPRLFWGAFTPNTIICQVSCGSVHV 179
+AA+ E DG RL++WG N G++ L I VSCG H
Sbjct: 151 SAALTE----DG-----RLFLWGDNSAGQLGFGNDSHALLPKELNMGQSIHWVSCGYRHS 201
Query: 180 VALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYH 239
+++ G + ++G + G+LG ++ L Y + ++ L + QV+CG H
Sbjct: 202 ALVTDSGDVYSFGESADGRLG--LSAHQLAN----HSYPQRVES---LHSVLQVACGGKH 252
Query: 240 SAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKD----VACGGVHS 295
+ A++E+ E+Y +G G GQLG G + VA+ G F K V CG HS
Sbjct: 253 TLALTED-ELYCFGGGEFGQLG-----LGTLVFVADSPVAV-GHFRKGRVTHVTCGEQHS 305
Query: 296 CALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHS 355
+T G LY +G + G+LG G + + P +F V VACG S
Sbjct: 306 ALITDSGLLYTFGDGRHGKLGHGDENFTNQFTPTVCQRFFEY--------SVMTVACGSS 357
Query: 356 HTLVYMR 362
H LV+ R
Sbjct: 358 HMLVFAR 364
Score = 211 (79.3 bits), Expect = 2.6e-13, P = 2.6e-13
Identities = 77/242 (31%), Positives = 114/242 (47%)
Query: 233 VSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGG 292
+SCG+ HSA V+E G ++ +G + GQLG LQ P V L G + VACG
Sbjct: 39 ISCGQSHSAFVTEQGRLFVFGDNNRGQLG---LQIKGPVTKPVCVKVLKGERAQSVACGT 95
Query: 293 VHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPIL-VVPNGVQLVA 351
H+ TS+G + A GG+ GQLGLG N+S ++ R P P ++L++
Sbjct: 96 DHTLVSTSQGEILAAGGNSDGQLGLGHC--------NDSISFQRLRPFCDYAP--IKLLS 145
Query: 352 CGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAV 410
G + DGR+ WG NS GQ ++A P ++ +G+ + ++ G HSA+
Sbjct: 146 AGDHTSAALTEDGRLFLWGDNSAGQLGFGNDSHALLPKELN--MGQSIHWVSCGYRHSAL 203
Query: 411 LADA---CSLKELCEFRLAESV-TLSNASEIEDVASRTGSEALARLCERLREHSLHGDEF 466
+ D+ S E + RL S L+N S + V S L C +L DE
Sbjct: 204 VTDSGDVYSFGESADGRLGLSAHQLANHSYPQRVESL--HSVLQVACGGKHTLALTEDEL 261
Query: 467 DC 468
C
Sbjct: 262 YC 263
Score = 197 (74.4 bits), Expect = 8.8e-12, P = 8.8e-12
Identities = 61/188 (32%), Positives = 93/188 (49%)
Query: 228 EKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKD 287
+ I VSCG HSA V+++G+VY++G + G+LG + Q + P+RV +L +
Sbjct: 189 QSIHWVSCGYRHSALVTDSGDVYSFGESADGRLGLSAHQLANHSY-PQRVESLHSVL--Q 245
Query: 288 VACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGV 347
VACGG H+ ALT + LY +GG + GQLGLG T F + +FR V
Sbjct: 246 VACGGKHTLALT-EDELYCFGGGEFGQLGLG--TLVFVADSPVAVGHFRK-------GRV 295
Query: 348 QLVACGHSHTLVYMRDGRIHGWGYNSYGQAAN--EKSTYAWYPSPVD-WCVGEVRKLAAG 404
V CG H+ + G ++ +G +G+ + E T + P+ + V +A G
Sbjct: 296 THVTCGEQHSALITDSGLLYTFGDGRHGKLGHGDENFTNQFTPTVCQRFFEYSVMTVACG 355
Query: 405 GGHSAVLA 412
H V A
Sbjct: 356 SSHMLVFA 363
Score = 191 (72.3 bits), Expect = 4.0e-11, P = 4.0e-11
Identities = 68/215 (31%), Positives = 100/215 (46%)
Query: 111 LQSEFVKSISCGAHCTAAIAEPRENDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTII- 169
L+S+ ISCG +A + E RL+V+G N G T +
Sbjct: 31 LKSDIPVHISCGQSHSAFVTEQ---------GRLFVFGDNNRGQLGLQIKGPVTKPVCVK 81
Query: 170 ------CQ-VSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLD 222
Q V+CG+ H + + G + A G N GQLG G + + R+ F D
Sbjct: 82 VLKGERAQSVACGTDHTLVSTSQGEILAAGGNSDGQLGLGHCNDSISFQRL----RPFCD 137
Query: 223 EAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDG 282
AP I +S G++ SAA++E+G ++ WG S GQLG + LLP+ + G
Sbjct: 138 YAP----IKLLSAGDHTSAALTEDGRLFLWGDNSAGQLG---FGNDSHALLPKELNM--G 188
Query: 283 IFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGL 317
I V+CG HS +T G +Y++G S G+LGL
Sbjct: 189 QSIHWVSCGYRHSALVTDSGDVYSFGESADGRLGL 223
Score = 187 (70.9 bits), Expect = 1.1e-10, P = 1.1e-10
Identities = 81/280 (28%), Positives = 118/280 (42%)
Query: 143 RLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQ-LGR 201
RL+V+G N G T + + VA CG G+ L
Sbjct: 54 RLFVFGDNNRGQLGLQIKGPVTKPVCVKVLKGERAQSVA---CGTDHTLVSTSQGEILAA 110
Query: 202 GITCEGLQGPRVIKGYAKFLDEAP--ELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQ 259
G +G G F P + I +S G++ SAA++E+G ++ WG S GQ
Sbjct: 111 GGNSDGQLGLGHCNDSISFQRLRPFCDYAPIKLLSAGDHTSAALTEDGRLFLWGDNSAGQ 170
Query: 260 LGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGP 319
LG + LLP+ + G I V+CG HS +T G +Y++G S G+LGL
Sbjct: 171 LG---FGNDSHALLPKELNM--GQSIHWVSCGYRHSALVTDSGDVYSFGESADGRLGL-- 223
Query: 320 QTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAAN 379
S + N S Y + + L + V VACG HTL D ++ +G +GQ
Sbjct: 224 ---SAHQLANHS--YPQRVESL---HSVLQVACGGKHTLALTED-ELYCFGGGEFGQLGL 274
Query: 380 EKSTYAWYPSPVDWCVGEVRK-----LAAGGGHSAVLADA 414
+ SPV VG RK + G HSA++ D+
Sbjct: 275 GTLVFV-ADSPV--AVGHFRKGRVTHVTCGEQHSALITDS 311
Score = 168 (64.2 bits), Expect = 1.3e-08, P = 1.3e-08
Identities = 50/183 (27%), Positives = 88/183 (48%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+++WG N +GQ G G + +PK+L G + W ++CG+ H+A V G
Sbjct: 160 LFLWGDNSAGQLGF-GNDSHALLPKELN-------MGQSIHW--VSCGYRHSALVTDSGD 209
Query: 83 LFTWGANEFGQLGDGTEEGRKH--PEKVKQLQSEFVKSISCGAHCTAAIAEPREND-GTI 139
++++G + G+LG + H P++V+ L S V ++CG T A+ E G
Sbjct: 210 VYSFGESADGRLGLSAHQLANHSYPQRVESLHS--VLQVACGGKHTLALTEDELYCFGGG 267
Query: 140 STSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQL 199
+L + ++ P + G F + V+CG H +++ GLL +G +G+L
Sbjct: 268 EFGQLGLGTLVFVADSP-VAVGHFRKGRVT-HVTCGEQHSALITDSGLLYTFGDGRHGKL 325
Query: 200 GRG 202
G G
Sbjct: 326 GHG 328
Score = 130 (50.8 bits), Expect = 0.00017, P = 0.00017
Identities = 52/192 (27%), Positives = 83/192 (43%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGC-PAGANSRWLDIACGHEHTA 75
+ + ++V+G N+ GQ G Q++ P P C R +ACG +HT
Sbjct: 49 VTEQGRLFVFGDNNRGQLGL-----QIKGPVTKPV----CVKVLKGERAQSVACGTDHTL 99
Query: 76 AVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEF-VKSISCGAHCTAAIAEPRE 134
S G + G N GQLG G ++++ +K +S G H +AA+ E
Sbjct: 100 VSTSQGEILAAGGNSDGQLGLGHCNDSISFQRLRPFCDYAPIKLLSAGDHTSAALTE--- 156
Query: 135 NDGTISTSRLWVWGQNQ------GSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLL 188
DG RL++WG N G++ L I VSCG H +++ G +
Sbjct: 157 -DG-----RLFLWGDNSAGQLGFGNDSHALLPKELNMGQSIHWVSCGYRHSALVTDSGDV 210
Query: 189 QAWGYNEYGQLG 200
++G + G+LG
Sbjct: 211 YSFGESADGRLG 222
>TAIR|locus:2099986 [details] [associations]
symbol:AT3G55580 species:3702 "Arabidopsis thaliana"
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] INTERPRO:IPR000408 Pfam:PF00415
EMBL:CP002686 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 EMBL:AL132975
HSSP:P18754 IPI:IPI00521720 PIR:T47697 RefSeq:NP_191117.1
UniGene:At.35013 ProteinModelPortal:Q9M2S1 SMR:Q9M2S1 PRIDE:Q9M2S1
EnsemblPlants:AT3G55580.1 GeneID:824723 KEGG:ath:AT3G55580
TAIR:At3g55580 InParanoid:Q9M2S1 OMA:HPIPCIE PhylomeDB:Q9M2S1
ProtClustDB:CLSN2685056 Genevestigator:Q9M2S1 Uniprot:Q9M2S1
Length = 488
Score = 285 (105.4 bits), Expect = 1.3e-22, P = 1.3e-22
Identities = 78/231 (33%), Positives = 109/231 (47%)
Query: 162 AFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVI-----KG 216
+ P I V+ G H +ALS+ G + WGY GQLG G + P I
Sbjct: 229 SLAPGVRIVSVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRVRLVSSPHPIPCIEPSS 288
Query: 217 YAKFLDEAPELEKITQ-----------VSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSL 265
Y K + + Q ++CG HSA +++ G + T+G G GQ C
Sbjct: 289 YGKATSSGVNMSSVVQCGRVLGSYVKKIACGGRHSAVITDTGALLTFGWGLYGQ---CGQ 345
Query: 266 QSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFS 325
S D EL P V +L GI I++VA G H+ +S G +YA+GG+Q GQLG G
Sbjct: 346 GSTDDELSPTCVSSLLGIRIEEVAAGLWHTTCASSDGDVYAFGGNQFGQLGTGCDQAE-- 403
Query: 326 LIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQ 376
+P + P L N V+ ++CG HT V +GR+ WG+N YGQ
Sbjct: 404 TLPKLLEA-----PNLENVN-VKTISCGARHTAVITDEGRVFCWGWNKYGQ 448
Score = 209 (78.6 bits), Expect = 2.3e-17, Sum P(2) = 2.3e-17
Identities = 56/193 (29%), Positives = 96/193 (49%)
Query: 171 QVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKI 230
+++CG H +++ G L +G+ YGQ G+G T + L P + +I
Sbjct: 315 KIACGGRHSAVITDTGALLTFGWGLYGQCGQGSTDDELS-PTCVSSLLGI--------RI 365
Query: 231 TQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVA--LDGIFIKDV 288
+V+ G +H+ S +G+VY +G GQLG Q+ E LP+ + A L+ + +K +
Sbjct: 366 EEVAAGLWHTTCASSDGDVYAFGGNQFGQLGTGCDQA---ETLPKLLEAPNLENVNVKTI 422
Query: 289 ACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIP--ILVVPNG 346
+CG H+ +T +G ++ WG ++ GQLG+G D RN P + +
Sbjct: 423 SCGARHTAVITDEGRVFCWGWNKYGQLGIG-------------DVIDRNAPAEVRIKDCF 469
Query: 347 VQLVACGHSHTLV 359
+ +ACG HTL+
Sbjct: 470 PKNIACGWWHTLL 482
Score = 183 (69.5 bits), Expect = 1.0e-12, Sum P(2) = 1.0e-12
Identities = 66/211 (31%), Positives = 97/211 (45%)
Query: 95 GDGTEEGRKHPEKVK--QLQSEFVKSISCGAHCTAAIAEPRENDGTISTSRLWVWGQ-NQ 151
G T G V+ ++ +VK I+CG +A I + G + T ++GQ Q
Sbjct: 290 GKATSSGVNMSSVVQCGRVLGSYVKKIACGGRHSAVITDT----GALLTFGWGLYGQCGQ 345
Query: 152 GSNFPRLFWGAFTP--NTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQ 209
GS L + I +V+ G H S G + A+G N++GQLG G C+ Q
Sbjct: 346 GSTDDELSPTCVSSLLGIRIEEVAAGLWHTTCASSDGDVYAFGGNQFGQLGTG--CD--Q 401
Query: 210 GPRVIKGYAKFLDEAPELEKIT--QVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQS 267
+ K L EAP LE + +SCG H+A +++ G V+ WG GQLG +
Sbjct: 402 AETLPK-----LLEAPNLENVNVKTISCGARHTAVITDEGRVFCWGWNKYGQLGIGDVI- 455
Query: 268 GDKELLPRRVVALDGIFIKDVACGGVHSCAL 298
D+ P V D F K++ACG H+ L
Sbjct: 456 -DRNA-PAEVRIKD-CFPKNIACGWWHTLLL 483
Score = 176 (67.0 bits), Expect = 6.3e-12, Sum P(2) = 6.3e-12
Identities = 42/138 (30%), Positives = 66/138 (47%)
Query: 67 IACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGA-HC 125
IACG H+A + G L T+G +GQ G G+ + P V L ++ ++ G H
Sbjct: 316 IACGGRHSAVITDTGALLTFGWGLYGQCGQGSTDDELSPTCVSSLLGIRIEEVAAGLWHT 375
Query: 126 TAAIAEPREND-GTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSE 184
T A ++ G +L G +Q P+L N + +SCG+ H +++
Sbjct: 376 TCASSDGDVYAFGGNQFGQLGT-GCDQAETLPKLLEAPNLENVNVKTISCGARHTAVITD 434
Query: 185 CGLLQAWGYNEYGQLGRG 202
G + WG+N+YGQLG G
Sbjct: 435 EGRVFCWGWNKYGQLGIG 452
Score = 157 (60.3 bits), Expect = 3.7e-08, P = 3.7e-08
Identities = 72/265 (27%), Positives = 112/265 (42%)
Query: 165 PNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGI-TCEGLQGPRVIKGYAKFLDE 223
P + + G H VA++E + WG+ E GR +G R I + +
Sbjct: 115 PEVCVQKAEAGWAHCVAVTENQQVYTWGWRECIPTGRVFGQVDGDSCERNISFSTEQVSS 174
Query: 224 APELEKITQVSCGEYHSAAVSENGEVYTWG--LGSVGQLGHCSLQSGDKEL--LPRRVVA 279
+ + +K S G S G T + Q S QS + +L LP V
Sbjct: 175 SSQGKK----SSGGTSSQVEGRGGGEPTKKRRISPSKQAAENSSQSDNIDLSALPCLVSL 230
Query: 280 LDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSL---IPN-ESDTYF 335
G+ I VA GG H+ AL+ G ++ WG GQLGLG + R S IP E +Y
Sbjct: 231 APGVRIVSVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRVRLVSSPHPIPCIEPSSYG 290
Query: 336 R------NIPILV-----VPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTY 384
+ N+ +V + + V+ +ACG H+ V G + +G+ YGQ +
Sbjct: 291 KATSSGVNMSSVVQCGRVLGSYVKKIACGGRHSAVITDTGALLTFGWGLYGQCGQGSTDD 350
Query: 385 AWYPSPVDWCVG-EVRKLAAGGGHS 408
P+ V +G + ++AAG H+
Sbjct: 351 ELSPTCVSSLLGIRIEEVAAGLWHT 375
Score = 156 (60.0 bits), Expect = 4.8e-08, P = 4.8e-08
Identities = 38/110 (34%), Positives = 57/110 (51%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+Y +G N GQ G G ++ +PK L P N I+CG HTA + +G
Sbjct: 384 VYAFGGNQFGQLGT-GCDQAETLPK-----LLEAPNLENVNVKTISCGARHTAVITDEGR 437
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEP 132
+F WG N++GQLG G R P +V+ ++ F K+I+CG T + +P
Sbjct: 438 VFCWGWNKYGQLGIGDVIDRNAPAEVR-IKDCFPKNIACGWWHTLLLGQP 486
Score = 145 (56.1 bits), Expect = 1.3e-15, Sum P(2) = 1.3e-15
Identities = 60/215 (27%), Positives = 92/215 (42%)
Query: 224 APELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLG-----------H---C------ 263
AP + +I V+ G H+ A+S+ G+V+ WG G GQLG H C
Sbjct: 231 APGV-RIVSVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRVRLVSSPHPIPCIEPSSY 289
Query: 264 --SLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQT 321
+ SG + + G ++K +ACGG HS +T GAL +G GQ G G
Sbjct: 290 GKATSSGVNMSSVVQCGRVLGSYVKKIACGGRHSAVITDTGALLTFGWGLYGQCGQGSTD 349
Query: 322 RSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEK 381
S P + +L + ++ VA G HT DG ++ +G N +GQ
Sbjct: 350 DELS--PTCVSS------LLGIR--IEEVAAGLWHTTCASSDGDVYAFGGNQFGQLGTGC 399
Query: 382 STYAWYPSPVDWCVGE---VRKLAAGGGHSAVLAD 413
P ++ E V+ ++ G H+AV+ D
Sbjct: 400 DQAETLPKLLEAPNLENVNVKTISCGARHTAVITD 434
Score = 142 (55.0 bits), Expect = 1.7e-06, P = 1.7e-06
Identities = 42/132 (31%), Positives = 69/132 (52%)
Query: 22 AIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDG 81
A+ +G+ GQ G+ + +L P + L G R ++A G HT +SDG
Sbjct: 331 ALLTFGWGLYGQCGQGSTDDELS-PTCVS-SLLGI------RIEEVAAGLWHTTCASSDG 382
Query: 82 TLFTWGANEFGQLGDGTEEGRKHPEKVK--QLQSEFVKSISCGAHCTAAIAEPRENDGTI 139
++ +G N+FGQLG G ++ P+ ++ L++ VK+ISCGA TA I + +G
Sbjct: 383 DVYAFGGNQFGQLGTGCDQAETLPKLLEAPNLENVNVKTISCGARHTAVITD----EG-- 436
Query: 140 STSRLWVWGQNQ 151
R++ WG N+
Sbjct: 437 ---RVFCWGWNK 445
Score = 131 (51.2 bits), Expect = 1.0e-06, Sum P(2) = 1.0e-06
Identities = 70/287 (24%), Positives = 107/287 (37%)
Query: 122 GAHCTAAIAEPRENDGTISTSRLWVWGQNQGSNFPR--LFWGAFT--PNTIICQ---VSC 174
G A E +E + +S +++WG G++ R L P + VS
Sbjct: 11 GTSAAATPKEEKEEEEVVSQRVVYMWGYLPGASPQRSPLMSPVEVKIPPAVESSWKDVSG 70
Query: 175 GSV-HVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQV 233
G +A +E G L WG + LG+ G G + PE+ + +
Sbjct: 71 GGCGFAMATAESGKLITWGSTD--DLGQSYVTSGKHGET-----PEPFPLPPEV-CVQKA 122
Query: 234 SCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQ-SGDKELLPRRVVALDGIFIKDVACGG 292
G H AV+EN +VYTWG G Q GD R ++ + + G
Sbjct: 123 EAGWAHCVAVTENQQVYTWGWRECIPTGRVFGQVDGDS---CERNISFSTEQVSS-SSQG 178
Query: 293 VHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILV-VPNGVQLV- 350
S TS GG + + P ++ + +P LV + GV++V
Sbjct: 179 KKSSGGTSSQVEGRGGGEPTKKRRISPSKQAAENSSQSDNIDLSALPCLVSLAPGVRIVS 238
Query: 351 -ACGHSHTLVYMRDGRIHGWGYNSYGQAA-NEKSTYAWYPSPVDWCV 395
A G HTL G++ GWGY GQ + P P+ C+
Sbjct: 239 VAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRVRLVSSPHPIP-CI 284
Score = 128 (50.1 bits), Expect = 1.3e-15, Sum P(2) = 1.3e-15
Identities = 70/270 (25%), Positives = 111/270 (41%)
Query: 15 DNIPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIA---CGH 71
+ + ++ +Y+WGY G Q R P P E+ P S W D++ CG
Sbjct: 25 EEVVSQRVVYMWGY-------LPGASPQ-RSPLMSPVEV-KIPPAVESSWKDVSGGGCGF 75
Query: 72 EHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQ--LQSEF-VKSISCG-AHCTA 127
A A G L TWG+ + LG KH E + L E V+ G AHC A
Sbjct: 76 --AMATAESGKLITWGSTD--DLGQSYVTSGKHGETPEPFPLPPEVCVQKAEAGWAHCVA 131
Query: 128 AIAEPRENDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGL 187
EN +++ WG + R+F G ++ +S + V + S+ G
Sbjct: 132 VT----ENQ------QVYTWGWRECIPTGRVF-GQVDGDSCERNISFSTEQVSSSSQ-GK 179
Query: 188 LQAWGYNEYGQLGRGITCEGLQGPRVI--KGYAKFLDEAPELE--------------KIT 231
+ G + + GRG E + R+ K A+ ++ ++ +I
Sbjct: 180 KSSGGTSSQVE-GRG-GGEPTKKRRISPSKQAAENSSQSDNIDLSALPCLVSLAPGVRIV 237
Query: 232 QVSCGEYHSAAVSENGEVYTWGLGSVGQLG 261
V+ G H+ A+S+ G+V+ WG G GQLG
Sbjct: 238 SVAAGGRHTLALSDIGQVWGWGYGGEGQLG 267
Score = 126 (49.4 bits), Expect = 3.7e-06, Sum P(2) = 3.7e-06
Identities = 60/211 (28%), Positives = 83/211 (39%)
Query: 23 IYVWGYNHS-GQTG-RKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASD 80
+ WG GQ+ G+ + P LPPE+ C A + W H AV +
Sbjct: 85 LITWGSTDDLGQSYVTSGKHGETPEPFPLPPEV--CVQKAEAGWA-------HCVAVTEN 135
Query: 81 GTLFTWGANE-------FGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPR 133
++TWG E FGQ+ DG R +Q+ S S G T++ E R
Sbjct: 136 QQVYTWGWRECIPTGRVFGQV-DGDSCERNISFSTEQVSSSSQGKKSSGG--TSSQVEGR 192
Query: 134 EN-DGT----ISTSRLWVWGQNQGSNF-----PRLFWGAFTPNTIICQVSCGSVHVVALS 183
+ T IS S+ +Q N P L + P I V+ G H +ALS
Sbjct: 193 GGGEPTKKRRISPSKQAAENSSQSDNIDLSALPCLV--SLAPGVRIVSVAAGGRHTLALS 250
Query: 184 ECGLLQAWGYNEYGQLGRGITCEGLQGPRVI 214
+ G + WGY GQLG G + P I
Sbjct: 251 DIGQVWGWGYGGEGQLGLGSRVRLVSSPHPI 281
Score = 75 (31.5 bits), Expect = 2.3e-17, Sum P(2) = 2.3e-17
Identities = 19/69 (27%), Positives = 35/69 (50%)
Query: 63 RWLDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGR-KHPEKVKQLQ-SEFVKSIS 120
R + +A G HT A++ G ++ WG GQLG G+ P + ++ S + K+ S
Sbjct: 235 RIVSVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRVRLVSSPHPIPCIEPSSYGKATS 294
Query: 121 CGAHCTAAI 129
G + ++ +
Sbjct: 295 SGVNMSSVV 303
Score = 59 (25.8 bits), Expect = 1.1e-15, Sum P(2) = 1.1e-15
Identities = 16/53 (30%), Positives = 24/53 (45%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLP---PELFG--CPAGANSRWLDIACG 70
++ WGY GQ G R R + P +P P +G +G N + + CG
Sbjct: 255 VWGWGYGGEGQLGLGSRVRLVSSPHPIPCIEPSSYGKATSSGVNMSSV-VQCG 306
Score = 57 (25.1 bits), Expect = 1.0e-06, Sum P(2) = 1.0e-06
Identities = 11/20 (55%), Positives = 15/20 (75%)
Query: 398 VRKLAAGGGHSAVLADACSL 417
V+K+A GG HSAV+ D +L
Sbjct: 313 VKKIACGGRHSAVITDTGAL 332
>ASPGD|ASPL0000064315 [details] [associations]
symbol:rcc1 species:162425 "Emericella nidulans"
[GO:0000790 "nuclear chromatin" evidence=IDA] [GO:0005087 "Ran
guanyl-nucleotide exchange factor activity" evidence=IEA]
[GO:0004871 "signal transducer activity" evidence=IEA] [GO:0006406
"mRNA export from nucleus" evidence=IEA] [GO:0006407 "rRNA export
from nucleus" evidence=IEA] [GO:0000054 "ribosomal subunit export
from nucleus" evidence=IEA] [GO:0031291 "Ran protein signal
transduction" evidence=IEA] [GO:0042992 "negative regulation of
transcription factor import into nucleus" evidence=IEA] [GO:1901673
"regulation of spindle assembly involved in mitosis" evidence=IEA]
[GO:0060623 "regulation of chromosome condensation" evidence=IEA]
[GO:0007093 "mitotic cell cycle checkpoint" evidence=IEA]
[GO:0030071 "regulation of mitotic metaphase/anaphase transition"
evidence=IEA] [GO:0032888 "regulation of mitotic spindle
elongation" evidence=IEA] INTERPRO:IPR000408 Pfam:PF00415
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 EMBL:BN001304
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
EMBL:AACD01000117 eggNOG:COG5184 OMA:PFEAIWA HOGENOM:HOG000170207
OrthoDB:EOG466ZVF RefSeq:XP_664582.1 ProteinModelPortal:Q5AXK2
STRING:Q5AXK2 EnsemblFungi:CADANIAT00000503 GeneID:2870170
KEGG:ani:AN6978.2 Uniprot:Q5AXK2
Length = 533
Score = 229 (85.7 bits), Expect = 1.6e-22, Sum P(2) = 1.6e-22
Identities = 77/255 (30%), Positives = 109/255 (42%)
Query: 174 CGSVHVVALSECGLLQAWGYNEYGQLGRGIT----CEGLQGPRVIKGYAKFLDEAPELEK 229
CG HV+AL++ G + +WG + QLGR I GLQ PR G K
Sbjct: 291 CGDNHVLALNDKGAVLSWGSGQQNQLGRRIIERNKLNGLQ-PREF-GLPK---------G 339
Query: 230 ITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVA 289
I + G +HS AV ++G+V+ WGL S G+ G +GD E +D + K+V
Sbjct: 340 IVHIGAGAFHSFAVHQSGKVFAWGLNSFGETG-IRENAGDSEAAIVHPTVVDSLSKKNVT 398
Query: 290 --CGGVH-SCALTSKGALYAWGGSQAGQLGLGPQTR-SFSLIPNESDTYFRNIPILVVPN 345
CGG H S A T G WG Q GL T ++I +E D I VP
Sbjct: 399 QICGGAHHSIAATQDGECLVWGRLDGYQTGLKIDTLPDDAVIKDERDRPRILIEPTAVPG 458
Query: 346 -GVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCV--GEVRKLA 402
+ VA G H++ GR WG+++ Q + ++ G+ A
Sbjct: 459 IKAKAVAAGSDHSIAIDTSGRPWSWGFSATYQTGQGTQDDVEVATVIENTAVRGKSLNWA 518
Query: 403 AGGGHSAVLADACSL 417
GGG +V + L
Sbjct: 519 GGGGQFSVFTEPVEL 533
Score = 200 (75.5 bits), Expect = 7.6e-13, P = 7.6e-13
Identities = 76/283 (26%), Positives = 118/283 (41%)
Query: 165 PNTI-ICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEG----LQGPRVIKGYAK 219
P+ + + QV+ G +H VAL+ + WG N+ G LGR T EG +
Sbjct: 145 PDDVGVVQVAVGGMHCVALTHDNKVLTWGVNDQGALGRDTTWEGGYKDMDNRDSDSDSDS 204
Query: 220 FLDEAPELEK------------------ITQVSCGEYHSAAVSENGEVYTWGL-----GS 256
D+ P+L I +V+ G+ S A+++ G+VY WG G
Sbjct: 205 DSDDNPDLNPHECTPTAIPSSAFPHGTVIVEVAAGDSSSFALTDEGQVYGWGTFRSNDGI 264
Query: 257 VGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLG 316
+G +Q+ K LLP D IK + CG H AL KGA+ +WG Q QLG
Sbjct: 265 LGFDAKTKVQTTPK-LLP------DLKKIKHLVCGDNHVLALNDKGAVLSWGSGQQNQLG 317
Query: 317 --LGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSY 374
+ + + L P E +P G+ + G H+ + G++ WG NS+
Sbjct: 318 RRIIERNKLNGLQPREFG----------LPKGIVHIGAGAFHSFAVHQSGKVFAWGLNSF 367
Query: 375 GQA-----ANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLA 412
G+ A + +P+ VD + GG H ++ A
Sbjct: 368 GETGIRENAGDSEAAIVHPTVVDSLSKKNVTQICGGAHHSIAA 410
Score = 185 (70.2 bits), Expect = 3.5e-11, P = 3.5e-11
Identities = 78/296 (26%), Positives = 134/296 (45%)
Query: 46 PKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGTLFTWGA--NEFGQLG-DGTEEGR 102
P +P F P G +++A G + A+ +G ++ WG + G LG D + +
Sbjct: 219 PTAIPSSAF--PHGTVI--VEVAAGDSSSFALTDEGQVYGWGTFRSNDGILGFDAKTKVQ 274
Query: 103 KHPEKVKQLQSEFVKSISCGAHCTAAIAEPRE--NDGTISTSRLW--VWGQNQGSNF-PR 157
P+ + L+ +K + CG + A+ + + G+ ++L + +N+ + PR
Sbjct: 275 TTPKLLPDLKK--IKHLVCGDNHVLALNDKGAVLSWGSGQQNQLGRRIIERNKLNGLQPR 332
Query: 158 LFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLG----RGITCEGLQGPRV 213
F G P I+ + G+ H A+ + G + AWG N +G+ G G + + P V
Sbjct: 333 EF-GL--PKGIV-HIGAGAFHSFAVHQSGKVFAWGLNSFGETGIRENAGDSEAAIVHPTV 388
Query: 214 IKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHC--SLQSG--- 268
+ +K + +TQ+ G +HS A +++GE WG Q G +L
Sbjct: 389 VDSLSK--------KNVTQICGGAHHSIAATQDGECLVWGRLDGYQTGLKIDTLPDDAVI 440
Query: 269 -DKELLPRRVV---ALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQ 320
D+ PR ++ A+ GI K VA G HS A+ + G ++WG S Q G G Q
Sbjct: 441 KDERDRPRILIEPTAVPGIKAKAVAAGSDHSIAIDTSGRPWSWGFSATYQTGQGTQ 496
Score = 176 (67.0 bits), Expect = 1.9e-16, Sum P(2) = 1.9e-16
Identities = 55/210 (26%), Positives = 88/210 (41%)
Query: 162 AFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFL 221
AF T+I +V+ G AL++ G + WG GI G ++ K L
Sbjct: 226 AFPHGTVIVEVAAGDSSSFALTDEGQVYGWGTFRSND---GIL--GFDAKTKVQTTPKLL 280
Query: 222 DEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKE-LLPRRVVAL 280
P+L+KI + CG+ H A+++ G V +WG G QLG ++ L PR
Sbjct: 281 ---PDLKKIKHLVCGDNHVLALNDKGAVLSWGSGQQNQLGRRIIERNKLNGLQPREFGLP 337
Query: 281 DGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPI 340
GI + G HS A+ G ++AWG + G+ G+ +E+ +
Sbjct: 338 KGIV--HIGAGAFHSFAVHQSGKVFAWGLNSFGETGIRENAGD-----SEAAIVHPTVVD 390
Query: 341 LVVPNGVQLVACGHSHTLVYMRDGRIHGWG 370
+ V + G H++ +DG WG
Sbjct: 391 SLSKKNVTQICGGAHHSIAATQDGECLVWG 420
Score = 153 (58.9 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 62/215 (28%), Positives = 89/215 (41%)
Query: 20 KSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVAS 79
K A+ WG Q GR+ ER ++ L P FG P G + I G H+ AV
Sbjct: 302 KGAVLSWGSGQQNQLGRRIIERN-KL-NGLQPREFGLPKGI----VHIGAGAFHSFAVHQ 355
Query: 80 DGTLFTWGANEFGQLG----DGTEEGR-KHPEKVKQLQSEFVKSISCGAHCTAAIAEPRE 134
G +F WG N FG+ G G E HP V L + V I GAH + A + E
Sbjct: 356 SGKVFAWGLNSFGETGIRENAGDSEAAIVHPTVVDSLSKKNVTQICGGAHHSIAATQDGE 415
Query: 135 N------DGTISTSRLWVWGQN----QGSNFPR-LFWGAFTPNTIICQVSCGSVHVVALS 183
DG + ++ + + PR L P V+ GS H +A+
Sbjct: 416 CLVWGRLDGYQTGLKIDTLPDDAVIKDERDRPRILIEPTAVPGIKAKAVAAGSDHSIAID 475
Query: 184 ECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYA 218
G +WG++ Q G+G T + ++ VI+ A
Sbjct: 476 TSGRPWSWGFSATYQTGQG-TQDDVEVATVIENTA 509
Score = 104 (41.7 bits), Expect = 1.6e-22, Sum P(2) = 1.6e-22
Identities = 30/91 (32%), Positives = 44/91 (48%)
Query: 14 VDNIP-AKSAIYVWGYNHSGQTGRKGRERQLRIPK-QLPPELFGCPAGANSRWLDIACGH 71
++N P AK +YV G SG+ G + + + + +L P L G + +A G
Sbjct: 102 INNAPTAKLNVYVCGEGSSGELGLGVGKNVIDVKRPRLNPHLLPDDVGV----VQVAVGG 157
Query: 72 EHTAAVASDGTLFTWGANEFGQLG-DGTEEG 101
H A+ D + TWG N+ G LG D T EG
Sbjct: 158 MHCVALTHDNKVLTWGVNDQGALGRDTTWEG 188
>UNIPROTKB|J9NWD8 [details] [associations]
symbol:HERC1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005622 "intracellular" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
Pfam:PF00632 InterPro:IPR017986 InterPro:IPR000569
InterPro:IPR001680 InterPro:IPR003877 InterPro:IPR015943
Pfam:PF00400 Pfam:PF00622 PROSITE:PS50082 PROSITE:PS50237
PROSITE:PS50294 SMART:SM00119 SMART:SM00320 INTERPRO:IPR000408
Pfam:PF00415 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016567 GO:GO:0005622 InterPro:IPR008985
SUPFAM:SSF49899 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 InterPro:IPR001870 InterPro:IPR018355 SMART:SM00449
PROSITE:PS50188 SUPFAM:SSF56204 GeneTree:ENSGT00700000104312
EMBL:AAEX03016202 Ensembl:ENSCAFT00000042764 Uniprot:J9NWD8
Length = 4118
Score = 298 (110.0 bits), Expect = 1.6e-22, P = 1.6e-22
Identities = 79/255 (30%), Positives = 131/255 (51%)
Query: 68 ACGHE-HTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCT 126
+CG + H+ A+ G +F+WG ++G+LG G + ++ P +++ LQ E V +SCG +
Sbjct: 3344 SCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHS 3403
Query: 127 AAIAEPRE--NDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSE 184
A + + G RL + G P I QV+CG H +A+S
Sbjct: 3404 AVVTSDGKLFTFGNGDYGRLGL-GNTSNKKLPERVTAL--EGYQIGQVACGLNHTLAVSA 3460
Query: 185 CG-LLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAV 243
G ++ A+G +YG+LG G + K + +D + I +V+CG S A+
Sbjct: 3461 DGSMVWAFGDGDYGKLGLGNS--------TAKSSPQKVDVLCGIG-IKKVACGTQFSVAL 3511
Query: 244 SENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGA 303
+++G VYT+G + L ++ ++ P+++ L G+ I+DVA G H+ AL S G
Sbjct: 3512 TKDGHVYTFGQDRLIGLPEGRARNHNR---PQQIPVLAGVVIEDVAVGAEHTLALASTGD 3568
Query: 304 LYAWGGSQAGQLGLG 318
+YAWG + GQLGLG
Sbjct: 3569 VYAWGSNSEGQLGLG 3583
Score = 269 (99.8 bits), Expect = 2.9e-19, P = 2.9e-19
Identities = 100/332 (30%), Positives = 149/332 (44%)
Query: 1 MDINEIIGETARPVD-NIPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAG 59
MD + T+RP D ++ K +Y+WG GQ GR + +P P F
Sbjct: 3233 MDEQIMSWATSRPEDWHLGGKCDVYLWGAGRHGQLAEAGRN--VMVPAAAPS--F----- 3283
Query: 60 ANSRWLDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSI 119
S+ + CG T + ++GT+ G +G+LG G + + LQ V +
Sbjct: 3284 --SQAQQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQL 3341
Query: 120 --SCGA--HCTAAIAEPRE--NDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVS 173
SCG+ H + A+ E E + G +L G + PR A ++ Q+S
Sbjct: 3342 VTSCGSDGH-SMALTESGEVFSWGDGDYGKLG-HGNSDRQRRPRQI-EALQGEEVV-QMS 3397
Query: 174 CGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRV--IKGYAKFLDEAPELEKIT 231
CG H ++ G L +G +YG+LG G T RV ++GY +I
Sbjct: 3398 CGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGY-----------QIG 3446
Query: 232 QVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACG 291
QV+CG H+ AVS +G + W G G G L + + P++V L GI IK VACG
Sbjct: 3447 QVACGLNHTLAVSADGSM-VWAFGD-GDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACG 3504
Query: 292 GVHSCALTSKGALYAWGGSQAGQLGLGPQTRS 323
S ALT G +Y +G Q +GL P+ R+
Sbjct: 3505 TQFSVALTKDGHVYTFG--QDRLIGL-PEGRA 3533
Score = 256 (95.2 bits), Expect = 8.0e-18, P = 8.0e-18
Identities = 91/307 (29%), Positives = 143/307 (46%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ WG G+ G +RQ R P+Q+ L G + ++CG +H+A V SDG
Sbjct: 3360 VFSWGDGDYGKLGHGNSDRQRR-PRQIEA-LQG------EEVVQMSCGFKHSAVVTSDGK 3411
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
LFT+G ++G+LG G +K PE+V L+ + ++CG + T A++ DG S
Sbjct: 3412 LFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSA----DG----S 3463
Query: 143 RLWVWGQNQGSNFPRLFWGAFTPNT------IIC-----QVSCGSVHVVALSECGLLQAW 191
+W +G ++ +L G T + ++C +V+CG+ VAL++ G + +
Sbjct: 3464 MVWAFGDG---DYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTF 3520
Query: 192 GYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYT 251
G + L G P+ I A + I V+ G H+ A++ G+VY
Sbjct: 3521 GQDRLIGLPEG-RARNHNRPQQIPVLAGVV--------IEDVAVGAEHTLALASTGDVYA 3571
Query: 252 WGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGAL-YAWGGS 310
WG S GQLG L + P V L G I+ ++ G HS A T+ A G S
Sbjct: 3572 WGSNSEGQLG---LGHTNHVREPTLVTVLQGKNIRQISAGRCHSAAWTAPPVPPRAPGVS 3628
Query: 311 QAGQLGL 317
QLGL
Sbjct: 3629 VPLQLGL 3635
Score = 211 (79.3 bits), Expect = 7.0e-13, P = 7.0e-13
Identities = 66/184 (35%), Positives = 94/184 (51%)
Query: 229 KITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDV 288
+I QV+CG H+ AVS +G + W G G G L + + P++V L GI IK V
Sbjct: 3444 QIGQVACGLNHTLAVSADGSM-VWAFGD-GDYGKLGLGNSTAKSSPQKVDVLCGIGIKKV 3501
Query: 289 ACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQ 348
ACG S ALT G +Y +G Q +GL P+ R+ N + + IP+L GV
Sbjct: 3502 ACGTQFSVALTKDGHVYTFG--QDRLIGL-PEGRA----RNHNRP--QQIPVLA---GVV 3549
Query: 349 L--VACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGG 405
+ VA G HTL G ++ WG NS GQ + + P+ V G+ +R+++AG
Sbjct: 3550 IEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVREPTLVTVLQGKNIRQISAGR 3609
Query: 406 GHSA 409
HSA
Sbjct: 3610 CHSA 3613
Score = 184 (69.8 bits), Expect = 6.2e-10, P = 6.2e-10
Identities = 69/228 (30%), Positives = 100/228 (43%)
Query: 191 WGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVY 250
WG +GQL G V+ A AP + QV CG+ + + NG V
Sbjct: 3259 WGAGRHGQLAEA-------GRNVMVPAA-----APSFSQAQQVICGQNCTFVIQANGTVL 3306
Query: 251 TWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDV--ACGGV-HSCALTSKGALYAW 307
G GS G+LG + S D +L + AL G + + +CG HS ALT G +++W
Sbjct: 3307 ACGEGSYGRLGQGN--SDDLHVLTV-ISALQGFVVTQLVTSCGSDGHSMALTESGEVFSW 3363
Query: 308 GGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIH 367
G G+LG G R P R I L VQ+ +CG H+ V DG++
Sbjct: 3364 GDGDYGKLGHGNSDRQRR--P-------RQIEALQGEEVVQM-SCGFKHSAVVTSDGKLF 3413
Query: 368 GWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHS-AVLAD 413
+G YG+ ++ P V G ++ ++A G H+ AV AD
Sbjct: 3414 TFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSAD 3461
>RGD|1561739 [details] [associations]
symbol:Herc6 "HECT and RLD domain containing E3 ubiquitin
protein ligase family member 6" species:10116 "Rattus norvegicus"
[GO:0005634 "nucleus" evidence=ISO] [GO:0005737 "cytoplasm"
evidence=ISO] Pfam:PF00632 InterPro:IPR000569 PROSITE:PS50237
SMART:SM00119 RGD:1561739 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005634 GO:GO:0005737 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 GO:GO:0042787 SUPFAM:SSF56204 eggNOG:COG5021
HOGENOM:HOG000208452 HOVERGEN:HBG050878 OrthoDB:EOG4N30N6
IPI:IPI00553869 EMBL:BC085921 UniGene:Rn.107120
ProteinModelPortal:Q5U2P8 PhosphoSite:Q5U2P8 UCSC:RGD:1561739
InParanoid:Q5U2P8 ArrayExpress:Q5U2P8 Genevestigator:Q5U2P8
Uniprot:Q5U2P8
Length = 1034
Score = 291 (107.5 bits), Expect = 1.7e-22, P = 1.7e-22
Identities = 91/308 (29%), Positives = 142/308 (46%)
Query: 58 AGANSRWLDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVK 117
AG + L A G H+ + S+ +++ G N GQLG + + K PE ++ L + +
Sbjct: 24 AGTGLKLLKAASGERHSLLLFSNHRVYSCGDNSRGQLGQKSPQSTKRPEPIQALSTVHID 83
Query: 118 SISCGA-HCTAAIAEPREND-GTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCG 175
+SCG H A + R G S +L + G+++ +F + II QVSCG
Sbjct: 84 LVSCGKEHSVAVCHQGRVFTWGAGSEGQLGI-GESKEISFMPTKINSLAGIKII-QVSCG 141
Query: 176 SVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSC 235
H +ALSE G + +WG N GQLG G P+ +K L+ P + QV+
Sbjct: 142 HYHSLALSEDGQVFSWGSNRQGQLGLGNNLCSQASPQKVKS----LEGIP----LAQVAA 193
Query: 236 GEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHS 295
G HS A+S G + WG GQL + ++ P + AL + + ++CG H+
Sbjct: 194 GGTHSFALSLMGTSFGWGNNRSGQLALSGNSAKEQIYKPHSIGALKTLNVVYISCGYEHT 253
Query: 296 CALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNG--VQLVACG 353
LT G ++ +GGS + QL P++ R P L+ G V + CG
Sbjct: 254 SVLTEDGQVFTFGGSSSEQLQHSPRSG-------------RGGPQLIEGIGGHVSQIECG 300
Query: 354 HSHTLVYM 361
HT+ Y+
Sbjct: 301 SYHTIAYV 308
Score = 255 (94.8 bits), Expect = 1.9e-18, P = 1.9e-18
Identities = 71/215 (33%), Positives = 109/215 (50%)
Query: 229 KITQVSCGEYHSAAVSENGEVYTWGLGSVGQLG-HCSLQSGDKELLPRRVVALDGIFIKD 287
KI QVSCG YHS A+SE+G+V++WG GQLG +L S + P++V +L+GI +
Sbjct: 134 KIIQVSCGHYHSLALSEDGQVFSWGSNRQGQLGLGNNLCS---QASPQKVKSLEGIPLAQ 190
Query: 288 VACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGV 347
VA GG HS AL+ G + WG +++GQL L + + S I L N V
Sbjct: 191 VAAGGTHSFALSLMGTSFGWGNNRSGQLALSGNSAKEQIYKPHS------IGALKTLN-V 243
Query: 348 QLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGH 407
++CG+ HT V DG++ +G +S Q + + P ++ G V ++ G H
Sbjct: 244 VYISCGYEHTSVLTEDGQVFTFGGSSSEQLQHSPRSGRGGPQLIEGIGGHVSQIECGSYH 303
Query: 408 SAVLADACSLKELCEFRLAESVTLSNASEIEDVAS 442
+ +A + ++ S T SNA+ E S
Sbjct: 304 T--IAYVYTTGQVVSLGRGPSCT-SNATHQEAACS 335
Score = 240 (89.5 bits), Expect = 8.7e-17, P = 8.7e-17
Identities = 65/187 (34%), Positives = 96/187 (51%)
Query: 229 KITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDV 288
K+ + + GE HS + N VY+ G S GQLG S QS + P + AL + I V
Sbjct: 29 KLLKAASGERHSLLLFSNHRVYSCGDNSRGQLGQKSPQSTKR---PEPIQALSTVHIDLV 85
Query: 289 ACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQ 348
+CG HS A+ +G ++ WG GQLG+G +++ S +P + ++ I I +Q
Sbjct: 86 SCGKEHSVAVCHQGRVFTWGAGSEGQLGIG-ESKEISFMPTKINS-LAGIKI------IQ 137
Query: 349 LVACGHSHTLVYMRDGRIHGWGYNSYGQAA--NEKSTYAWYPSPVDWCVG-EVRKLAAGG 405
V+CGH H+L DG++ WG N GQ N + A P V G + ++AAGG
Sbjct: 138 -VSCGHYHSLALSEDGQVFSWGSNRQGQLGLGNNLCSQA-SPQKVKSLEGIPLAQVAAGG 195
Query: 406 GHSAVLA 412
HS L+
Sbjct: 196 THSFALS 202
Score = 235 (87.8 bits), Expect = 3.1e-16, P = 3.1e-16
Identities = 85/260 (32%), Positives = 122/260 (46%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSR-WLD-IACGHEHTAAVASD 80
+Y G N GQ G+K + R PE P A S +D ++CG EH+ AV
Sbjct: 49 VYSCGDNSRGQLGQKSPQSTKR------PE----PIQALSTVHIDLVSCGKEHSVAVCHQ 98
Query: 81 GTLFTWGANEFGQLGDG-TEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTI 139
G +FTWGA GQLG G ++E P K+ L + +SCG + + A++E DG +
Sbjct: 99 GRVFTWGAGSEGQLGIGESKEISFMPTKINSLAGIKIIQVSCGHYHSLALSE----DGQV 154
Query: 140 STSRLWVWGQN-QGS-NFPRLFWGAFTPNTI-------ICQVSCGSVHVVALSECGLLQA 190
+ WG N QG +P + + QV+ G H ALS G
Sbjct: 155 FS-----WGSNRQGQLGLGNNLCSQASPQKVKSLEGIPLAQVAAGGTHSFALSLMGTSFG 209
Query: 191 WGYNEYGQLG-RGITC-EGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGE 248
WG N GQL G + E + P I G K L+ + +SCG H++ ++E+G+
Sbjct: 210 WGNNRSGQLALSGNSAKEQIYKPHSI-GALKTLN-------VVYISCGYEHTSVLTEDGQ 261
Query: 249 VYTWGLGSVGQLGHCSLQSG 268
V+T+G S QL H S +SG
Sbjct: 262 VFTFGGSSSEQLQH-SPRSG 280
Score = 205 (77.2 bits), Expect = 6.3e-13, P = 6.3e-13
Identities = 74/286 (25%), Positives = 125/286 (43%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ WG GQ G G +++ +P ++ A + + ++CGH H+ A++ DG
Sbjct: 101 VFTWGAGSEGQLGI-GESKEISF---MPTKINSL---AGIKIIQVSCGHYHSLALSEDGQ 153
Query: 83 LFTWGANEFGQLGDGTEE-GRKHPEKVKQLQSEFVKSISCGA-HCTA-AIAEPRENDGTI 139
+F+WG+N GQLG G + P+KVK L+ + ++ G H A ++ G
Sbjct: 154 VFSWGSNRQGQLGLGNNLCSQASPQKVKSLEGIPLAQVAAGGTHSFALSLMGTSFGWGNN 213
Query: 140 STSRLWVWGQNQGSNF--PRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYG 197
+ +L + G + P T N + +SCG H L+E G + +G +
Sbjct: 214 RSGQLALSGNSAKEQIYKPHSIGALKTLNVVY--ISCGYEHTSVLTEDGQVFTFGGSSSE 271
Query: 198 QLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAA-VSENGEVYTWGLGS 256
QL G GP++I+G ++Q+ CG YH+ A V G+V + G G
Sbjct: 272 QLQHSPR-SGRGGPQLIEGIGGH---------VSQIECGSYHTIAYVYTTGQVVSLGRGP 321
Query: 257 --VGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTS 300
H D L +D I +KD+ G H+ +T+
Sbjct: 322 SCTSNATHQEAACSDVTCLLSAKDLVD-IEVKDIFAGA-HANFVTT 365
Score = 131 (51.2 bits), Expect = 7.4e-05, P = 7.4e-05
Identities = 41/144 (28%), Positives = 66/144 (45%)
Query: 274 PRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGL-GPQTRSFSLIPNESD 332
PRR+ A G+ + A G HS L S +Y+ G + GQLG PQ+
Sbjct: 19 PRRLEAGTGLKLLKAASGERHSLLLFSNHRVYSCGDNSRGQLGQKSPQSTK--------- 69
Query: 333 TYFRNIPILVVPN-GVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAA-NEKSTYAWYPSP 390
R PI + + LV+CG H++ GR+ WG S GQ E ++ P+
Sbjct: 70 ---RPEPIQALSTVHIDLVSCGKEHSVAVCHQGRVFTWGAGSEGQLGIGESKEISFMPTK 126
Query: 391 VDWCVG-EVRKLAAGGGHSAVLAD 413
++ G ++ +++ G HS L++
Sbjct: 127 INSLAGIKIIQVSCGHYHSLALSE 150
>UNIPROTKB|O95714 [details] [associations]
symbol:HERC2 "E3 ubiquitin-protein ligase HERC2"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0020037 "heme binding" evidence=IEA] [GO:0005743
"mitochondrial inner membrane" evidence=IEA] [GO:0007283
"spermatogenesis" evidence=IEA] [GO:0005814 "centriole"
evidence=IEA] [GO:0042787 "protein ubiquitination involved in
ubiquitin-dependent protein catabolic process" evidence=IBA]
[GO:0005085 "guanyl-nucleotide exchange factor activity"
evidence=NAS] [GO:0006886 "intracellular protein transport"
evidence=NAS] [GO:0006281 "DNA repair" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA] [GO:0016567
"protein ubiquitination" evidence=IDA] [GO:0006974 "response to DNA
damage stimulus" evidence=IDA] [GO:0031625 "ubiquitin protein
ligase binding" evidence=IPI] [GO:0032183 "SUMO binding"
evidence=IDA] Pfam:PF00632 InterPro:IPR000433 InterPro:IPR000569
InterPro:IPR001199 InterPro:IPR010606 Pfam:PF00173 Pfam:PF00569
Pfam:PF06701 PROSITE:PS00191 PROSITE:PS01357 PROSITE:PS50082
PROSITE:PS50135 PROSITE:PS50237 PROSITE:PS50255 PROSITE:PS50294
PROSITE:PS51416 SMART:SM00119 SMART:SM00291 UniPathway:UPA00143
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005634 GO:GO:0005737
Reactome:REACT_6900 GO:GO:0006886 GO:GO:0005814 PROSITE:PS00678
GO:GO:0005743 GO:GO:0046872 GO:GO:0008270 GO:GO:0006281
GO:GO:0007283 GO:GO:0020037 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0005085 Gene3D:3.10.120.10 SUPFAM:SSF55856
InterPro:IPR008979 SUPFAM:SSF49785 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 InterPro:IPR004939
Pfam:PF03256 PROSITE:PS51284 GO:GO:0042787 GO:GO:0032183
Gene3D:2.30.30.30 InterPro:IPR021097 InterPro:IPR014722
Pfam:PF11515 SUPFAM:SSF56204 eggNOG:COG5021 CTD:8924 KO:K10595
OMA:QLAFTRD EMBL:AF071172 EMBL:AC091304 EMBL:AC126332 EMBL:AC135329
EMBL:AF224243 EMBL:AF224242 EMBL:AF224245 EMBL:AF224244
EMBL:AF224249 EMBL:AF224246 EMBL:AF224247 EMBL:AF224248
EMBL:AF224251 EMBL:AF224250 EMBL:AF224255 EMBL:AF224254
EMBL:AF224252 EMBL:AF224253 EMBL:AF224257 EMBL:AF224256
EMBL:AF225401 EMBL:AF225400 EMBL:AF225404 EMBL:AF225402
EMBL:AF225403 EMBL:AF225407 EMBL:AF225405 EMBL:AF225406
EMBL:AF225409 EMBL:AF225408 IPI:IPI00005826 RefSeq:NP_004658.3
UniGene:Hs.434890 UniGene:Hs.610412 UniGene:Hs.741019 PDB:2KEO
PDB:3KCI PDBsum:2KEO PDBsum:3KCI ProteinModelPortal:O95714
SMR:O95714 DIP:DIP-37632N IntAct:O95714 STRING:O95714
PhosphoSite:O95714 PaxDb:O95714 PRIDE:O95714
Ensembl:ENST00000261609 GeneID:8924 KEGG:hsa:8924 UCSC:uc001zbj.3
GeneCards:GC15M028356 H-InvDB:HIX0012044 H-InvDB:HIX0017540
H-InvDB:HIX0038121 H-InvDB:HIX0038320 H-InvDB:HIX0038830
H-InvDB:HIX0173226 H-InvDB:HIX0173299 H-InvDB:HIX0194348
HGNC:HGNC:4868 HPA:CAB017188 MIM:227220 MIM:605837
neXtProt:NX_O95714 PharmGKB:PA29243 HOVERGEN:HBG081598
InParanoid:O95714 OrthoDB:EOG41C6V9 PhylomeDB:O95714
EvolutionaryTrace:O95714 GenomeRNAi:8924 NextBio:33552
ArrayExpress:O95714 Bgee:O95714 Genevestigator:O95714
GermOnline:ENSG00000128731 InterPro:IPR006624 SMART:SM00706
Uniprot:O95714
Length = 4834
Score = 312 (114.9 bits), Expect = 2.2e-22, Sum P(3) = 2.2e-22
Identities = 90/284 (31%), Positives = 135/284 (47%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ WG G G+ G ++ K P L A R DIACG H+AA+ S G
Sbjct: 3068 VFSWG---EGDDGKLGHFSRMNCDK---PRLI--EALKTKRIRDIACGSSHSAALTSSGE 3119
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREN------D 136
L+TWG E+G+LG G + P+ VK L V ++CG+ +A E D
Sbjct: 3120 LYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGD 3179
Query: 137 GTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEY 196
G +L G ++G N P+ +CQ+ CG+ +AL++ G++ WG +Y
Sbjct: 3180 GDFG--KLGRGG-SEGCNIPQNIERLNGQG--VCQIECGAQFSLALTKSGVVWTWGKGDY 3234
Query: 197 GQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGS 256
+LG G ++ P+V++G +KI V+ G H AV+++G+VY WG
Sbjct: 3235 FRLGHGSDVH-VRKPQVVEGLRG--------KKIVHVAVGALHCLAVTDSGQVYAWGDND 3285
Query: 257 VGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTS 300
GQ G+ + K P V L+G I VACG HS A T+
Sbjct: 3286 HGQQGNGTTTVNRK---PTLVQGLEGQKITRVACGSSHSVAWTT 3326
Score = 304 (112.1 bits), Expect = 1.3e-21, Sum P(2) = 1.3e-21
Identities = 90/296 (30%), Positives = 137/296 (46%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
+ ++ +Y WG G+ G R R P+ + L G +D+A G H+A
Sbjct: 4054 LSSEGEVYSWGEAEDGKLGHGNRSPCDR-PRVIE-SLRGIEV------VDVAAGGAHSAC 4105
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND 136
V + G L+TWG +G+LG E + P+ V+ LQ V I+CG+ + +D
Sbjct: 4106 VTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLC--LTDD 4163
Query: 137 GTISTSRLWVWGQNQGSNFPRLFW-GAFTPNTI-------ICQVSCGSVHVVALSECGLL 188
T+ W WG R G P I + +V CGS VAL++ G +
Sbjct: 4164 DTV-----WSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAV 4218
Query: 189 QAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGE 248
WG +Y +LG G + + ++ PR ++G + +K+ ++ G H +E+GE
Sbjct: 4219 YTWGKGDYHRLGHG-SDDHVRRPRQVQGL--------QGKKVIAIATGSLHCVCCTEDGE 4269
Query: 249 VYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCAL-TSKGA 303
VYTWG GQLG + + + PR V AL G + VACG H+ A TSK A
Sbjct: 4270 VYTWGDNDEGQLGDGTTNAIQR---PRLVAALQGKKVNRVACGSAHTLAWSTSKPA 4322
Score = 301 (111.0 bits), Expect = 5.8e-21, Sum P(3) = 5.8e-21
Identities = 91/311 (29%), Positives = 152/311 (48%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
+ + +Y G +G+ G + IP+Q+ + + + + G H A
Sbjct: 3007 VTVEGKVYACGEATNGRLGLGISSGTVPIPRQIT-----ALSSYVVKKVAVHSGGRHATA 3061
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND 136
+ DG +F+WG + G+LG + P ++ L+++ ++ I+CG+ +AA+ +
Sbjct: 3062 LTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALT----SS 3117
Query: 137 GTISTSRLWVWGQ-NQGSNFPRL---FWGAFTPNTIICQVSCGS--VHVVALSECGLLQA 190
G + T L +G+ G N +L + +I QV+CGS +AL++ GL+ +
Sbjct: 3118 GELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVI-QVACGSRDAQTLALTDEGLVFS 3176
Query: 191 WGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVY 250
WG ++G+LGRG + EG P+ I E + + Q+ CG S A++++G V+
Sbjct: 3177 WGDGDFGKLGRGGS-EGCNIPQNI--------ERLNGQGVCQIECGAQFSLALTKSGVVW 3227
Query: 251 TWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGS 310
TWG G +LGH S K P+ V L G I VA G +H A+T G +YAWG +
Sbjct: 3228 TWGKGDYFRLGHGSDVHVRK---PQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDN 3284
Query: 311 QAGQLGLGPQT 321
GQ G G T
Sbjct: 3285 DHGQQGNGTTT 3295
Score = 294 (108.6 bits), Expect = 2.1e-20, Sum P(2) = 2.1e-20
Identities = 78/276 (28%), Positives = 131/276 (47%)
Query: 143 RLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRG 202
R++ N + P+L G + N + H +AL+ G + +WG + G+LG G
Sbjct: 471 RVYTQAYNSDTLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHG 530
Query: 203 ITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGH 262
T L+ P+VI ++ +A + + ++CG +SAA++ GE+YTWG G+ G+LGH
Sbjct: 531 DTVP-LEEPKVISAFSG--KQAGK--HVVHIACGSTYSAAITAEGELYTWGRGNYGRLGH 585
Query: 263 CSLQSGDKELLPRRVVALDGIFIKDVACGG--VHSCALTSKGALYAWGGSQAGQLGLGPQ 320
S + E +P V L G+ + DVACG + A+T G +++WG G+LG G
Sbjct: 586 ---GSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGS 642
Query: 321 T--RSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAA 378
++ LI D V V CG ++ +DG+++ WG +
Sbjct: 643 DGCKTPKLIEKLQDL------------DVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLG 690
Query: 379 NEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLAD 413
+ + YP ++ G+ V +AAG H L +
Sbjct: 691 HGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTE 726
Score = 290 (107.1 bits), Expect = 6.2e-20, Sum P(2) = 6.2e-20
Identities = 88/303 (29%), Positives = 141/303 (46%)
Query: 23 IYVWGYNHSGQTGRKGRE-RQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDG 81
IY WG+NH GQ G G E ++++P P C A A R + + G + AV +DG
Sbjct: 3954 IYGWGHNHRGQLG--GIEGAKVKVPT---P----CEALATLRPVQLIGGEQTLFAVTADG 4004
Query: 82 TLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSI---SCGAHCTAAIAEPREND-G 137
L+ G G+LG G E P ++ +Q F+K + S G HC A +E G
Sbjct: 4005 KLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWG 4064
Query: 138 TISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYG 197
+L G + PR+ + V+ G H ++ G L WG YG
Sbjct: 4065 EAEDGKLG-HGNRSPCDRPRVIESL--RGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYG 4121
Query: 198 QLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCG--EYHSAAVSENGEVYTWGLG 255
+LG + + L+ P+++ EA + ++ ++CG + + ++++ V++WG G
Sbjct: 4122 RLGHSDSEDQLK-PKLV--------EALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDG 4172
Query: 256 SVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQL 315
G+LG G K +P ++ +L G+ + V CG S ALT GA+Y WG +L
Sbjct: 4173 DYGKLGRGG-SDGCK--VPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRL 4229
Query: 316 GLG 318
G G
Sbjct: 4230 GHG 4232
Score = 282 (104.3 bits), Expect = 5.4e-19, Sum P(2) = 5.4e-19
Identities = 91/296 (30%), Positives = 139/296 (46%)
Query: 70 GHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQS-EFVKSISCGAH--CT 126
G +H A++S+G +++WG E G+LG G P ++ L+ E V + GAH C
Sbjct: 4047 GGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACV 4106
Query: 127 AAIAEPRENDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGS--VHVVALSE 184
A + G RL ++ P+L A + ++ ++CGS + L++
Sbjct: 4107 TAAGD-LYTWGKGRYGRLG-HSDSEDQLKPKLV-EALQGHRVV-DIACGSGDAQTLCLTD 4162
Query: 185 CGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVS 244
+ +WG +YG+LGRG + +G + P I D L + +V CG S A++
Sbjct: 4163 DDTVWSWGDGDYGKLGRGGS-DGCKVPMKI-------DSLTGLG-VVKVECGSQFSVALT 4213
Query: 245 ENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGAL 304
++G VYTWG G +LGH S D PR+V L G + +A G +H T G +
Sbjct: 4214 KSGAVYTWGKGDYHRLGH---GSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEV 4270
Query: 305 YAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVY 360
Y WG + GQLG G T + P R + L V VACG +HTL +
Sbjct: 4271 YTWGDNDEGQLGDGT-TNAIQR-P-------RLVAALQGKK-VNRVACGSAHTLAW 4316
Score = 272 (100.8 bits), Expect = 7.9e-18, Sum P(2) = 7.9e-18
Identities = 90/289 (31%), Positives = 143/289 (49%)
Query: 134 ENDGTISTSRLWVWGQNQ-----GSNFPRLFWGAF--TPNTI-ICQVSCGSVHVVALSEC 185
E+ TI T +++VWG N G ++ +F T + + + QV+ GS + A++
Sbjct: 2952 ESAATIRT-KVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVE 3010
Query: 186 GLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSE 245
G + A G G+LG GI+ + PR I + ++ ++K+ V G H+ A++
Sbjct: 3011 GKVYACGEATNGRLGLGISSGTVPIPRQITALSSYV-----VKKVA-VHSGGRHATALTV 3064
Query: 246 NGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALY 305
+G+V++WG G G+LGH S + DK PR + AL I+D+ACG HS ALTS G LY
Sbjct: 3065 DGKVFSWGEGDDGKLGHFSRMNCDK---PRLIEALKTKRIRDIACGSSHSAALTSSGELY 3121
Query: 306 AWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGH--SHTLVYMRD 363
WG + G+LG G T L P + + +L+ +Q VACG + TL +
Sbjct: 3122 TWGLGEYGRLGHGDNTTQ--LKP-------KMVKVLLGHRVIQ-VACGSRDAQTLALTDE 3171
Query: 364 GRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVL 411
G + WG +G+ S P ++ G+ V ++ G S L
Sbjct: 3172 GLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLAL 3220
Score = 270 (100.1 bits), Expect = 3.7e-17, Sum P(3) = 3.7e-17
Identities = 79/255 (30%), Positives = 130/255 (50%)
Query: 70 GHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSE----FVKSISCGAHC 125
GH H A+A+ G +++WG + G+LG G + P+ + + V I+CG+
Sbjct: 504 GH-HYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTY 562
Query: 126 TAAIAEPRE--NDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGS--VHVVA 181
+AAI E G + RL G ++ P L G + V+CGS +A
Sbjct: 563 SAAITAEGELYTWGRGNYGRLG-HGSSEDEAIPMLVAGL--KGLKVIDVACGSGDAQTLA 619
Query: 182 LSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSA 241
++E G + +WG +YG+LGRG + +G + P++I+ K D L+ + +V CG S
Sbjct: 620 VTENGQVWSWGDGDYGKLGRGGS-DGCKTPKLIE---KLQD----LD-VVKVRCGSQFSI 670
Query: 242 AVSENGEVYTWGLGSVGQLGHCSLQSGDKELL--PRRVVALDGIFIKDVACGGVHSCALT 299
A++++G+VY+WG G +LGH G +E + P+ + L G + DVA G H ALT
Sbjct: 671 ALTKDGQVYSWGKGDNQRLGH-----GTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALT 725
Query: 300 SKGALYAWGGSQAGQ 314
+++WG + Q
Sbjct: 726 EDSEVHSWGSNDQCQ 740
Score = 269 (99.8 bits), Expect = 4.9e-17, Sum P(3) = 4.9e-17
Identities = 87/293 (29%), Positives = 138/293 (47%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
+ A +Y WG G+ G G L PK + G AG + + IACG ++AA
Sbjct: 510 LAATGEVYSWGCGDGGRLGH-GDTVPLEEPKVISA-FSGKQAGKHV--VHIACGSTYSAA 565
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND 136
+ ++G L+TWG +G+LG G+ E P V L+ V ++CG+ +A EN
Sbjct: 566 ITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVT-EN- 623
Query: 137 GTISTSRLWVWGQNQGSNFPRLFW-GAFTPNTI-------ICQVSCGSVHVVALSECGLL 188
++W WG R G TP I + +V CGS +AL++ G +
Sbjct: 624 -----GQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQV 678
Query: 189 QAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGE 248
+WG + +LG G T E ++ P++++G + +K+ V+ G H A++E+ E
Sbjct: 679 YSWGKGDNQRLGHG-TEEHVRYPKLLEGL--------QGKKVIDVAAGSTHCLALTEDSE 729
Query: 249 VYTWGLGSVGQLGHC-SLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTS 300
V++WG S Q H +L+ E P + LD I +ACG S A +S
Sbjct: 730 VHSWG--SNDQCQHFDTLRVTKPE--PAALPGLDTKHIVGIACGPAQSFAWSS 778
Score = 265 (98.3 bits), Expect = 1.4e-16, Sum P(3) = 1.4e-16
Identities = 87/307 (28%), Positives = 142/307 (46%)
Query: 20 KSAIYVWGYNHSGQTGR-KGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVA 78
++ ++VWG N Q G KG + +++P F A + + +A G + AV
Sbjct: 2958 RTKVFVWGLNDKDQLGGLKGSK--IKVPS------FSETLSALNV-VQVAGGSKSLFAVT 3008
Query: 79 SDGTLFTWGANEFGQLGDGTEEGRKH-PEKVKQLQSEFVKSI---SCGAHCTAAIAEPRE 134
+G ++ G G+LG G G P ++ L S VK + S G H TA + +
Sbjct: 3009 VEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKV 3068
Query: 135 ND-GTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGY 193
G +L + + + PRL T I ++CGS H AL+ G L WG
Sbjct: 3069 FSWGEGDDGKLGHFSR-MNCDKPRLIEALKTKR--IRDIACGSSHSAALTSSGELYTWGL 3125
Query: 194 NEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCG--EYHSAAVSENGEVYT 251
EYG+LG G L+ P+++K L ++ QV+CG + + A+++ G V++
Sbjct: 3126 GEYGRLGHGDNTTQLK-PKMVK---VLLGH-----RVIQVACGSRDAQTLALTDEGLVFS 3176
Query: 252 WGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQ 311
WG G G+LG + + +P+ + L+G + + CG S ALT G ++ WG
Sbjct: 3177 WGDGDFGKLGRGGSEGCN---IPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGD 3233
Query: 312 AGQLGLG 318
+LG G
Sbjct: 3234 YFRLGHG 3240
Score = 245 (91.3 bits), Expect = 9.1e-15, Sum P(2) = 9.1e-15
Identities = 88/306 (28%), Positives = 130/306 (42%)
Query: 74 TAAVASDGTLFTWGANEFGQLGDGTEEGR-KHPEKVKQLQSEFVKSISCGAHCTAAIAEP 132
T + GT++ WG N GQLG G E + K P + L + + G A+
Sbjct: 3945 TLSAGGSGTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTAD 4003
Query: 133 RE--NDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQA 190
+ G + RL + G S P L V+ G H +ALS G + +
Sbjct: 4004 GKLYATGYGAGGRLGIGGTESVST-PTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYS 4062
Query: 191 WGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVY 250
WG E G+LG G PRVI+ ++ V+ G HSA V+ G++Y
Sbjct: 4063 WGEAEDGKLGHG-NRSPCDRPRVIESLRGI--------EVVDVAAGGAHSACVTAAGDLY 4113
Query: 251 TWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGG--VHSCALTSKGALYAWG 308
TWG G G+LGH + +L P+ V AL G + D+ACG + LT +++WG
Sbjct: 4114 TWGKGRYGRLGH---SDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWG 4170
Query: 309 GSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQL-VACGHSHTLVYMRDGRIH 367
G+LG G +P + D+ + ++ V G Q VA S + G H
Sbjct: 4171 DGDYGKLGRGGSDGC--KVPMKIDS-LTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYH 4227
Query: 368 GWGYNS 373
G+ S
Sbjct: 4228 RLGHGS 4233
Score = 232 (86.7 bits), Expect = 3.5e-12, Sum P(3) = 3.5e-12
Identities = 79/247 (31%), Positives = 113/247 (45%)
Query: 171 QVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKI 230
Q+ G + A++ G L A GY G+LG G T E + P +++ ++K+
Sbjct: 3989 QLIGGEQTLFAVTADGKLYATGYGAGGRLGIGGT-ESVSTPTLLESIQHVF-----IKKV 4042
Query: 231 TQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVAC 290
V+ G H A+S GEVY+WG G+LGH + D+ PR + +L GI + DVA
Sbjct: 4043 A-VNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDR---PRVIESLRGIEVVDVAA 4098
Query: 291 GGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVP-NGVQL 349
GG HS +T+ G LY WG + G+LG SD+ + P LV G ++
Sbjct: 4099 GGAHSACVTAAGDLYTWGKGRYGRLG-------------HSDSEDQLKPKLVEALQGHRV 4145
Query: 350 V--ACGH--SHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAG 404
V ACG + TL D + WG YG+ S P +D G V K+ G
Sbjct: 4146 VDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECG 4205
Query: 405 GGHSAVL 411
S L
Sbjct: 4206 SQFSVAL 4212
Score = 210 (79.0 bits), Expect = 6.9e-11, Sum P(2) = 6.9e-11
Identities = 73/255 (28%), Positives = 116/255 (45%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPP--ELFGCPAGANSRWLDIACGHEHT 74
+ A +Y GY G+ G G E + P L +F NS G +H
Sbjct: 4000 VTADGKLYATGYGAGGRLGIGGTE-SVSTPTLLESIQHVFIKKVAVNS-------GGKHC 4051
Query: 75 AAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQS-EFVKSISCGAH--CTAAIAE 131
A++S+G +++WG E G+LG G P ++ L+ E V + GAH C A +
Sbjct: 4052 LALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGD 4111
Query: 132 PRENDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGS--VHVVALSECGLLQ 189
G RL ++ P+L A + ++ ++CGS + L++ +
Sbjct: 4112 -LYTWGKGRYGRLG-HSDSEDQLKPKLV-EALQGHRVV-DIACGSGDAQTLCLTDDDTVW 4167
Query: 190 AWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEV 249
+WG +YG+LGRG + +G + P I D L + +V CG S A++++G V
Sbjct: 4168 SWGDGDYGKLGRGGS-DGCKVPMKI-------DSLTGLG-VVKVECGSQFSVALTKSGAV 4218
Query: 250 YTWGLGSVGQLGHCS 264
YTWG G +LGH S
Sbjct: 4219 YTWGKGDYHRLGHGS 4233
Score = 205 (77.2 bits), Expect = 8.6e-10, Sum P(3) = 8.6e-10
Identities = 77/271 (28%), Positives = 116/271 (42%)
Query: 56 CPAGANSRWLDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEF 115
C AN IAC + ++ +G ++T N L +G VK
Sbjct: 445 CEGLANLGVTQIACAEKRFLILSRNGRVYTQAYNS-DTLAPQLVQGLASRNIVK------ 497
Query: 116 VKSISCGAHCTAAIAEPREND-GTISTSRLWVWGQNQGSNFPRLFWGAFTPNTI---ICQ 171
+ + S G H A A G RL G P++ AF+ +
Sbjct: 498 IAAHSDGHHYLALAATGEVYSWGCGDGGRLG-HGDTVPLEEPKVI-SAFSGKQAGKHVVH 555
Query: 172 VSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKIT 231
++CGS + A++ G L WG YG+LG G + E P ++ G K L K+
Sbjct: 556 IACGSTYSAAITAEGELYTWGRGNYGRLGHG-SSEDEAIPMLVAGL-KGL-------KVI 606
Query: 232 QVSCG--EYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVA 289
V+CG + + AV+ENG+V++WG G G+LG G K P+ + L + + V
Sbjct: 607 DVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGG-SDGCKT--PKLIEKLQDLDVVKVR 663
Query: 290 CGGVHSCALTSKGALYAWGGSQAGQLGLGPQ 320
CG S ALT G +Y+WG +LG G +
Sbjct: 664 CGSQFSIALTKDGQVYSWGKGDNQRLGHGTE 694
Score = 200 (75.5 bits), Expect = 1.2e-08, Sum P(3) = 1.2e-08
Identities = 52/182 (28%), Positives = 83/182 (45%)
Query: 229 KITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDV 288
++ V+ G HSA V+ G++YTWG G G+LGH + +L P+ V AL G + D+
Sbjct: 4092 EVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGH---SDSEDQLKPKLVEALQGHRVVDI 4148
Query: 289 ACGG--VHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNG 346
ACG + LT +++WG G+LG G +P + D+ + G
Sbjct: 4149 ACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGC--KVPMKIDS--------LTGLG 4198
Query: 347 VQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGG 405
V V CG ++ + G ++ WG Y + + + P V G+ V +A G
Sbjct: 4199 VVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGS 4258
Query: 406 GH 407
H
Sbjct: 4259 LH 4260
Score = 196 (74.1 bits), Expect = 2.3e-09, Sum P(2) = 2.3e-09
Identities = 52/185 (28%), Positives = 89/185 (48%)
Query: 229 KITQVSCG--EYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIK 286
++ QV+CG + + A+++ G V++WG G G+LG + + +P+ + L+G +
Sbjct: 3152 RVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCN---IPQNIERLNGQGVC 3208
Query: 287 DVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNG 346
+ CG S ALT G ++ WG +LG G SD + R ++ G
Sbjct: 3209 QIECGAQFSLALTKSGVVWTWGKGDYFRLGHG------------SDVHVRKPQVVEGLRG 3256
Query: 347 VQLV--ACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAA 403
++V A G H L G+++ WG N +GQ N +T P+ V G+ + ++A
Sbjct: 3257 KKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVAC 3316
Query: 404 GGGHS 408
G HS
Sbjct: 3317 GSSHS 3321
Score = 193 (73.0 bits), Expect = 4.9e-09, Sum P(2) = 4.9e-09
Identities = 74/258 (28%), Positives = 115/258 (44%)
Query: 166 NTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAP 225
N + Q++C + LS G + YN + L P++++G A +
Sbjct: 450 NLGVTQIACAEKRFLILSRNGRVYTQAYNS----------DTL-APQLVQGLA-----SR 493
Query: 226 ELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELL--PRRVVALDGI 283
+ KI S G +H A++ GEVY+WG G G+LGH GD L P+ + A G
Sbjct: 494 NIVKIAAHSDG-HHYLALAATGEVYSWGCGDGGRLGH-----GDTVPLEEPKVISAFSGK 547
Query: 284 ----FIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIP 339
+ +ACG +S A+T++G LY WG G+LG G +E + IP
Sbjct: 548 QAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGS---------SEDEA----IP 594
Query: 340 ILVVP-NGVQL--VACGH--SHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWC 394
+LV G+++ VACG + TL +G++ WG YG+ S P ++
Sbjct: 595 MLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKL 654
Query: 395 VG-EVRKLAAGGGHSAVL 411
+V K+ G S L
Sbjct: 655 QDLDVVKVRCGSQFSIAL 672
Score = 177 (67.4 bits), Expect = 3.7e-06, Sum P(3) = 3.7e-06
Identities = 66/241 (27%), Positives = 108/241 (44%)
Query: 221 LDEAPELEKITQVSCG--EYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVV 278
L EA + ++ ++CG + + ++++ V++WG G G+LG G K +P ++
Sbjct: 4136 LVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG-SDGCK--VPMKID 4192
Query: 279 ALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNI 338
+L G+ + V CG S ALT GA+Y WG +LG G SD + R
Sbjct: 4193 SLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHG------------SDDHVRRP 4240
Query: 339 PILVVPNGVQLVAC--GHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG 396
+ G +++A G H + DG ++ WG N GQ + + P V G
Sbjct: 4241 RQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQG 4300
Query: 397 E-VRKLAAGGGHSAVLADACSLKELCEFRLAESVTL--SNASEIEDVASRTGSEALARLC 453
+ V ++A G H+ LA + S K +L V + ++ EI +A R L L
Sbjct: 4301 KKVNRVACGSAHT--LAWSTS-KPASAGKLPAQVPMEYNHLQEIPIIALRNRLLLLHHLS 4357
Query: 454 E 454
E
Sbjct: 4358 E 4358
Score = 175 (66.7 bits), Expect = 1.5e-06, Sum P(3) = 1.5e-06
Identities = 70/247 (28%), Positives = 102/247 (41%)
Query: 140 STSRLWVWGQNQGSNFPRLFWGAFTP---NTIICQVSCGSV--HVVALSECGLLQAWGYN 194
+T ++ WG G RL G P +I S HVV ++ CG +
Sbjct: 512 ATGEVYSWGCGDGG---RLGHGDTVPLEEPKVISAFSGKQAGKHVVHIA-CGSTYSAAIT 567
Query: 195 EYGQL---GRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCG--EYHSAAVSENGEV 249
G+L GRG G + + L K+ V+CG + + AV+ENG+V
Sbjct: 568 AEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGL-KVIDVACGSGDAQTLAVTENGQV 626
Query: 250 YTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGG 309
++WG G G+LG G K P+ + L + + V CG S ALT G +Y+WG
Sbjct: 627 WSWGDGDYGKLGRGG-SDGCKT--PKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGK 683
Query: 310 SQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGW 369
+LG G + E Y + + L + VA G +H L D +H W
Sbjct: 684 GDNQRLGHGTE---------EHVRYPKLLEGLQGKKVID-VAAGSTHCLALTEDSEVHSW 733
Query: 370 GYNSYGQ 376
G N Q
Sbjct: 734 GSNDQCQ 740
Score = 166 (63.5 bits), Expect = 1.4e-05, Sum P(3) = 1.4e-05
Identities = 45/131 (34%), Positives = 64/131 (48%)
Query: 230 ITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVA 289
+ Q+ CG S A++++G V+TWG G +LGH S K P+ V L G I VA
Sbjct: 3207 VCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRK---PQVVEGLRGKKIVHVA 3263
Query: 290 CGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQL 349
G +H A+T G +YAWG + GQ G G T N T + + +
Sbjct: 3264 VGALHCLAVTDSGQVYAWGDNDHGQQGNGTTT------VNRKPTLVQGLE----GQKITR 3313
Query: 350 VACGHSHTLVY 360
VACG SH++ +
Sbjct: 3314 VACGSSHSVAW 3324
Score = 43 (20.2 bits), Expect = 2.2e-22, Sum P(3) = 2.2e-22
Identities = 5/12 (41%), Positives = 10/12 (83%)
Query: 360 YMRDGRIHGWGY 371
++ DG ++GWG+
Sbjct: 3691 FISDGSVNGWGW 3702
Score = 37 (18.1 bits), Expect = 2.2e-22, Sum P(3) = 2.2e-22
Identities = 6/12 (50%), Positives = 9/12 (75%)
Query: 404 GGGHSAVLADAC 415
GGG+S +A+ C
Sbjct: 4479 GGGYSESIAEIC 4490
Score = 37 (18.1 bits), Expect = 2.2e-22, Sum P(3) = 2.2e-22
Identities = 6/12 (50%), Positives = 10/12 (83%)
Query: 446 SEALARLCERLR 457
SE++A +CE L+
Sbjct: 4483 SESIAEICEELQ 4494
Score = 37 (18.1 bits), Expect = 3.5e-12, Sum P(3) = 3.5e-12
Identities = 9/28 (32%), Positives = 12/28 (42%)
Query: 161 GAFTPNTIICQVSCGSVHVVALSECGLL 188
GA P +I V C S A S+ +
Sbjct: 3415 GALMPAAMIAPVECPSFSSAAPSDASAM 3442
>UNIPROTKB|F1PBB3 [details] [associations]
symbol:HERC6 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005622 "intracellular" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
Pfam:PF00632 InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0016567 GO:GO:0005622
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 SUPFAM:SSF56204
GeneTree:ENSGT00660000095216 OMA:HIFAGTY EMBL:AAEX03016752
EMBL:AAEX03016750 EMBL:AAEX03016751 Ensembl:ENSCAFT00000015531
Uniprot:F1PBB3
Length = 1018
Score = 289 (106.8 bits), Expect = 2.8e-22, P = 2.8e-22
Identities = 68/181 (37%), Positives = 99/181 (54%)
Query: 229 KITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDV 288
KI QVSCG YHS A+SE G+V++WG S GQLG + + P+RV +LDGI + V
Sbjct: 130 KIKQVSCGHYHSLALSEGGQVFSWGSNSDGQLGLG--KKFPSQASPQRVRSLDGIPLAQV 187
Query: 289 ACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPN-GV 347
A GG HS AL+ G + WG + AGQL L N S ++ I + N GV
Sbjct: 188 AAGGAHSFALSLSGTSFGWGRNNAGQLALHKN--------NVSGQSYKPYSISALKNLGV 239
Query: 348 QLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGH 407
++CG+ HT+V ++G++ +G N+YGQ + + P V+ G V ++ G H
Sbjct: 240 IYISCGYEHTVVLTQNGKVFTFGDNTYGQLGHSPTAEKSGPQLVEGIDGLVSQIDCGSYH 299
Query: 408 S 408
+
Sbjct: 300 T 300
Score = 274 (101.5 bits), Expect = 1.4e-20, P = 1.4e-20
Identities = 97/311 (31%), Positives = 147/311 (47%)
Query: 68 ACGHEHTAAVASDGTLFTWGANEFGQLGD-GTEEGRKHPEKVKQLQSEFVKSISCGA-HC 125
A G H+ + S+G + + G N GQLG G + E+++ L++ V +SCG H
Sbjct: 29 ASGERHSLLLLSNGQVHSCGDNGRGQLGQRGAPCSAQLKERIRALETLHVDLVSCGKEHS 88
Query: 126 TAAIAEPREND-GTISTSRLWVWGQNQGSNFPRLFWGAFTPNTI-ICQVSCGSVHVVALS 183
A + R G S +L G+ + +N + T N I I QVSCG H +ALS
Sbjct: 89 LAVCHKGRVFAWGAGSEGQLGT-GEFKETNLIPM--KIKTLNDIKIKQVSCGHYHSLALS 145
Query: 184 ECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAV 243
E G + +WG N GQLG G P+ ++ LD P + QV+ G HS A+
Sbjct: 146 EGGQVFSWGSNSDGQLGLGKKFPSQASPQRVRS----LDGIP----LAQVAAGGAHSFAL 197
Query: 244 SENGEVYTWGLGSVGQLG-HCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKG 302
S +G + WG + GQL H + SG + P + AL + + ++CG H+ LT G
Sbjct: 198 SLSGTSFGWGRNNAGQLALHKNNVSG-QSYKPYSISALKNLGVIYISCGYEHTVVLTQNG 256
Query: 303 ALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILV--VPNGVQLVACGHSHTLVY 360
++ +G + GQLG P T ++ P LV + V + CG HTL Y
Sbjct: 257 KVFTFGDNTYGQLGHSP-------------TAEKSGPQLVEGIDGLVSQIDCGSYHTLAY 303
Query: 361 M-RDGRIHGWG 370
+ G++ +G
Sbjct: 304 VYTTGKVVSFG 314
Score = 270 (100.1 bits), Expect = 6.6e-21, Sum P(2) = 6.6e-21
Identities = 82/298 (27%), Positives = 140/298 (46%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLD-IACGHEHTAAVASDG 81
++ G N GQ G++G ++ +++ + +D ++CG EH+ AV G
Sbjct: 44 VHSCGDNGRGQLGQRGAPCSAQLKERI--------RALETLHVDLVSCGKEHSLAVCHKG 95
Query: 82 TLFTWGANEFGQLGDGT-EEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIS 140
+F WGA GQLG G +E P K+K L +K +SCG + + A++E G
Sbjct: 96 RVFAWGAGSEGQLGTGEFKETNLIPMKIKTLNDIKIKQVSCGHYHSLALSE-----G--- 147
Query: 141 TSRLWVWGQNQGSNFP--RLFWGAFTPNTI-------ICQVSCGSVHVVALSECGLLQAW 191
+++ WG N + F +P + + QV+ G H ALS G W
Sbjct: 148 -GQVFSWGSNSDGQLGLGKKFPSQASPQRVRSLDGIPLAQVAAGGAHSFALSLSGTSFGW 206
Query: 192 GYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYT 251
G N GQL + + G + Y + A + + +SCG H+ +++NG+V+T
Sbjct: 207 GRNNAGQLA--LHKNNVSG----QSYKPYSISALKNLGVIYISCGYEHTVVLTQNGKVFT 260
Query: 252 WGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALT-SKGALYAWG 308
+G + GQLGH + +K P+ V +DG+ + + CG H+ A + G + ++G
Sbjct: 261 FGDNTYGQLGHSP--TAEKSG-PQLVEGIDGL-VSQIDCGSYHTLAYVYTTGKVVSFG 314
Score = 234 (87.4 bits), Expect = 8.7e-17, Sum P(2) = 8.7e-17
Identities = 57/149 (38%), Positives = 77/149 (51%)
Query: 171 QVSCGSVHVVALSECGLLQAWGYNEYGQLG-RGITCEGLQGPRVIKGYAKFLDEAPELEK 229
Q + G H + L G + + G N GQLG RG C R+ A E
Sbjct: 27 QAASGERHSLLLLSNGQVHSCGDNGRGQLGQRGAPCSAQLKERI---------RALETLH 77
Query: 230 ITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVA 289
+ VSCG+ HS AV G V+ WG GS GQLG + + L+P ++ L+ I IK V+
Sbjct: 78 VDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGTGEFK--ETNLIPMKIKTLNDIKIKQVS 135
Query: 290 CGGVHSCALTSKGALYAWGGSQAGQLGLG 318
CG HS AL+ G +++WG + GQLGLG
Sbjct: 136 CGHYHSLALSEGGQVFSWGSNSDGQLGLG 164
Score = 233 (87.1 bits), Expect = 5.1e-16, P = 5.1e-16
Identities = 66/190 (34%), Positives = 96/190 (50%)
Query: 229 KITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGH----CSLQSGDKELLPRRVVALDGIF 284
++ Q + GE HS + NG+V++ G GQLG CS Q L R+ AL+ +
Sbjct: 24 ELRQAASGERHSLLLLSNGQVHSCGDNGRGQLGQRGAPCSAQ------LKERIRALETLH 77
Query: 285 IKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVP 344
+ V+CG HS A+ KG ++AWG GQLG G + + +LIP + T +I I
Sbjct: 78 VDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGTG-EFKETNLIPMKIKT-LNDIKI---- 131
Query: 345 NGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAA-NEKSTYAWYPSPVDWCVG-EVRKLA 402
+ V+CGH H+L G++ WG NS GQ +K P V G + ++A
Sbjct: 132 ---KQVSCGHYHSLALSEGGQVFSWGSNSDGQLGLGKKFPSQASPQRVRSLDGIPLAQVA 188
Query: 403 AGGGHSAVLA 412
AGG HS L+
Sbjct: 189 AGGAHSFALS 198
Score = 226 (84.6 bits), Expect = 6.9e-16, Sum P(2) = 6.9e-16
Identities = 66/239 (27%), Positives = 118/239 (49%)
Query: 20 KSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVAS 79
K ++ WG GQ G G ++ + +P ++ + + ++CGH H+ A++
Sbjct: 94 KGRVFAWGAGSEGQLGT-GEFKETNL---IPMKI---KTLNDIKIKQVSCGHYHSLALSE 146
Query: 80 DGTLFTWGANEFGQLGDGTE-EGRKHPEKVKQLQSEFVKSISCG-AHCTA-AIAEPREND 136
G +F+WG+N GQLG G + + P++V+ L + ++ G AH A +++
Sbjct: 147 GGQVFSWGSNSDGQLGLGKKFPSQASPQRVRSLDGIPLAQVAAGGAHSFALSLSGTSFGW 206
Query: 137 GTISTSRLWVWGQN-QGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNE 195
G + +L + N G ++ A N + +SCG H V L++ G + +G N
Sbjct: 207 GRNNAGQLALHKNNVSGQSYKPYSISALK-NLGVIYISCGYEHTVVLTQNGKVFTFGDNT 265
Query: 196 YGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAA-VSENGEVYTWG 253
YGQLG T E GP++++G +D ++Q+ CG YH+ A V G+V ++G
Sbjct: 266 YGQLGHSPTAEK-SGPQLVEG----IDGL-----VSQIDCGSYHTLAYVYTTGKVVSFG 314
Score = 125 (49.1 bits), Expect = 0.00033, P = 0.00033
Identities = 43/148 (29%), Positives = 65/148 (43%)
Query: 268 GDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLI 327
G + + RR V L G+ ++ A G HS L S G +++ G + GQLG S L
Sbjct: 8 GPRGPVSRRRVGLGGVELRQAASGERHSLLLLSNGQVHSCGDNGRGQLGQRGAPCSAQL- 66
Query: 328 PNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQ-AANEKSTYAW 386
E R + L V LV+CG H+L GR+ WG S GQ E
Sbjct: 67 -KER---IRALETL----HVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGTGEFKETNL 118
Query: 387 YPSPVDWCVG-EVRKLAAGGGHSAVLAD 413
P + ++++++ G HS L++
Sbjct: 119 IPMKIKTLNDIKIKQVSCGHYHSLALSE 146
Score = 53 (23.7 bits), Expect = 6.6e-21, Sum P(2) = 6.6e-21
Identities = 17/50 (34%), Positives = 25/50 (50%)
Query: 325 SLIP--NESDTYFRNIP-ILVVPNGVQLV-ACGHSHTLVYMRDGRIHGWG 370
+LIP N S F + P I + + +QL+ A H LVY++ WG
Sbjct: 608 NLIPAENSSPIIFSDFPFIFTLLSKIQLLQAESHLKILVYLKQKEYLPWG 657
>UNIPROTKB|G3MX12 [details] [associations]
symbol:HERC2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0020037 "heme binding" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] Pfam:PF00632 InterPro:IPR000433 InterPro:IPR000569
InterPro:IPR001199 InterPro:IPR010606 Pfam:PF00173 Pfam:PF00569
Pfam:PF06701 PROSITE:PS01357 PROSITE:PS50135 PROSITE:PS50237
PROSITE:PS50255 PROSITE:PS51416 SMART:SM00119 SMART:SM00291
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0046872 GO:GO:0008270
GO:GO:0020037 GO:GO:0005622 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 Gene3D:3.10.120.10 SUPFAM:SSF55856
InterPro:IPR008979 SUPFAM:SSF49785 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 InterPro:IPR004939 Pfam:PF03256
PROSITE:PS51284 Gene3D:2.30.30.30 InterPro:IPR021097
InterPro:IPR014722 Pfam:PF11515 SUPFAM:SSF56204
GeneTree:ENSGT00700000104208 InterPro:IPR006624 SMART:SM00706
EMBL:DAAA02003804 EMBL:DAAA02003805 Ensembl:ENSBTAT00000063010
Uniprot:G3MX12
Length = 4757
Score = 309 (113.8 bits), Expect = 5.2e-22, Sum P(3) = 5.2e-22
Identities = 90/284 (31%), Positives = 134/284 (47%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ WG G G+ G ++ K P L A R DIACG H+AA+ S G
Sbjct: 2989 VFSWG---EGDDGKLGHFSRMNCDK---PRLI--EALKTKRIRDIACGSSHSAALTSSGE 3040
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREN------D 136
L+TWG E+G+LG G + P+ VK L V ++CG+ +A E D
Sbjct: 3041 LYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGD 3100
Query: 137 GTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEY 196
G +L G ++G N P+ +CQ+ CG+ +AL++ G++ WG +Y
Sbjct: 3101 GDFG--KLGRGG-SEGCNIPQNIERLNGQG--VCQIECGAQFSLALTKSGVVWTWGKGDY 3155
Query: 197 GQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGS 256
+LG G ++ P+V++G +KI V+ G H AV++ G+VY WG
Sbjct: 3156 FRLGHGSDVH-VRKPQVVEGLRG--------KKIVHVAVGALHCLAVTDAGQVYAWGDND 3206
Query: 257 VGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTS 300
GQ G+ + K P V L+G I VACG HS A T+
Sbjct: 3207 HGQQGNGTTTVNRK---PTLVQGLEGQKITRVACGSSHSVAWTT 3247
Score = 306 (112.8 bits), Expect = 7.2e-22, Sum P(2) = 7.2e-22
Identities = 90/296 (30%), Positives = 137/296 (46%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
+ ++ +Y WG G+ G R R P+ + L G +D+A G H+A
Sbjct: 3977 LSSEGEVYSWGEAEDGKLGHGNRSPCDR-PRVIE-SLRGTEV------VDVAAGGAHSAC 4028
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND 136
V + G L+TWG +G+LG E + P+ V+ LQ V ++CG+ + +D
Sbjct: 4029 VTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDVACGSGDAQTLC--LTDD 4086
Query: 137 GTISTSRLWVWGQNQGSNFPRLFW-GAFTPNTI-------ICQVSCGSVHVVALSECGLL 188
T+ W WG R G P I + +V CGS VAL++ G +
Sbjct: 4087 DTV-----WSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAV 4141
Query: 189 QAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGE 248
WG +Y +LG G + + ++ PR ++G + +K+ ++ G H SE+GE
Sbjct: 4142 YTWGKGDYHRLGHG-SDDHVRRPRQVQGL--------QGKKVIAIATGSLHCVCCSEDGE 4192
Query: 249 VYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCAL-TSKGA 303
VYTWG GQLG + + + PR V AL G + VACG H+ A TSK A
Sbjct: 4193 VYTWGDNDEGQLGDGTTNAIQR---PRLVAALQGKKVNRVACGSAHTLAWSTSKPA 4245
Score = 304 (112.1 bits), Expect = 1.2e-21, Sum P(2) = 1.2e-21
Identities = 107/407 (26%), Positives = 178/407 (43%)
Query: 12 RPVD-NIPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACG 70
RP D + A + ++G+ H+ + G+ G ++ P C A A R + + G
Sbjct: 3863 RPDDWTLSAGGSGTIYGWGHNHR-GQLGGIEGAKVKVPTP-----CEALAALRPVQLIGG 3916
Query: 71 HEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSI---SCGAHCTA 127
+ AV +DG L+ G G+LG G E P ++ +Q F+K + S G HC A
Sbjct: 3917 EQTLFAVTADGKLYATGYGAGGRLGVGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLA 3976
Query: 128 AIAEPREND-GTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECG 186
+E G +L G + PR+ T + V+ G H ++ G
Sbjct: 3977 LSSEGEVYSWGEAEDGKLG-HGNRSPCDRPRVIESL--RGTEVVDVAAGGAHSACVTAAG 4033
Query: 187 LLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCG--EYHSAAVS 244
L WG YG+LG + + L+ P+++ EA + ++ V+CG + + ++
Sbjct: 4034 DLYTWGKGRYGRLGHSDSEDQLK-PKLV--------EALQGHRVVDVACGSGDAQTLCLT 4084
Query: 245 ENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGAL 304
++ V++WG G G+LG G K +P ++ +L G+ + V CG S ALT GA+
Sbjct: 4085 DDDTVWSWGDGDYGKLGRGG-SDGCK--VPMKIDSLTGLGVVKVECGSQFSVALTKSGAV 4141
Query: 305 YAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVAC--GHSHTLVYMR 362
Y WG +LG G SD + R + G +++A G H +
Sbjct: 4142 YTWGKGDYHRLGHG------------SDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCSE 4189
Query: 363 DGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHS 408
DG ++ WG N GQ + + P V G+ V ++A G H+
Sbjct: 4190 DGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHT 4236
Score = 300 (110.7 bits), Expect = 7.6e-21, Sum P(3) = 7.6e-21
Identities = 91/311 (29%), Positives = 152/311 (48%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
+ + +Y G +G+ G + IP+Q+ + + + + G H A
Sbjct: 2928 VTVEGKVYACGEATNGRLGLGISSGTVPIPRQIT-----ALSSYVVKKVAVHSGGRHATA 2982
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND 136
+ DG +F+WG + G+LG + P ++ L+++ ++ I+CG+ +AA+ +
Sbjct: 2983 LTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALT----SS 3038
Query: 137 GTISTSRLWVWGQ-NQGSNFPRL---FWGAFTPNTIICQVSCGS--VHVVALSECGLLQA 190
G + T L +G+ G N +L + +I QV+CGS +AL++ GL+ +
Sbjct: 3039 GELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVI-QVACGSRDAQTLALTDEGLVFS 3097
Query: 191 WGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVY 250
WG ++G+LGRG + EG P+ I E + + Q+ CG S A++++G V+
Sbjct: 3098 WGDGDFGKLGRGGS-EGCNIPQNI--------ERLNGQGVCQIECGAQFSLALTKSGVVW 3148
Query: 251 TWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGS 310
TWG G +LGH S K P+ V L G I VA G +H A+T G +YAWG +
Sbjct: 3149 TWGKGDYFRLGHGSDVHVRK---PQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAWGDN 3205
Query: 311 QAGQLGLGPQT 321
GQ G G T
Sbjct: 3206 DHGQQGNGTTT 3216
Score = 293 (108.2 bits), Expect = 2.6e-20, Sum P(2) = 2.6e-20
Identities = 78/276 (28%), Positives = 131/276 (47%)
Query: 143 RLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRG 202
R++ N + P+L G + N + H +AL+ G + +WG + G+LG G
Sbjct: 382 RVYTQAYNSDTLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHG 441
Query: 203 ITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGH 262
T L+ P+VI ++ +A + + ++CG +SAA++ GE+YTWG G+ G+LGH
Sbjct: 442 DTVP-LEEPKVISAFSG--KQAGK--HVVHIACGSTYSAAITAEGELYTWGRGNYGRLGH 496
Query: 263 CSLQSGDKELLPRRVVALDGIFIKDVACGG--VHSCALTSKGALYAWGGSQAGQLGLGPQ 320
S + E +P V L G+ + DVACG + A+T G +++WG G+LG G
Sbjct: 497 ---GSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGS 553
Query: 321 T--RSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAA 378
++ LI D V V CG ++ +DG+++ WG +
Sbjct: 554 DGCKTPKLIEKLQDL------------DVVKVRCGSQFSVALTKDGQVYSWGKGDNQRLG 601
Query: 379 NEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLAD 413
+ + YP ++ G+ V +AAG H L +
Sbjct: 602 HGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTE 637
Score = 272 (100.8 bits), Expect = 3.3e-17, Sum P(3) = 3.3e-17
Identities = 90/289 (31%), Positives = 143/289 (49%)
Query: 134 ENDGTISTSRLWVWGQNQ-----GSNFPRLFWGAF--TPNTI-ICQVSCGSVHVVALSEC 185
E+ TI T +++VWG N G ++ +F T + + + QV+ GS + A++
Sbjct: 2873 ESAATIRT-KVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVE 2931
Query: 186 GLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSE 245
G + A G G+LG GI+ + PR I + ++ ++K+ V G H+ A++
Sbjct: 2932 GKVYACGEATNGRLGLGISSGTVPIPRQITALSSYV-----VKKVA-VHSGGRHATALTV 2985
Query: 246 NGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALY 305
+G+V++WG G G+LGH S + DK PR + AL I+D+ACG HS ALTS G LY
Sbjct: 2986 DGKVFSWGEGDDGKLGHFSRMNCDK---PRLIEALKTKRIRDIACGSSHSAALTSSGELY 3042
Query: 306 AWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGH--SHTLVYMRD 363
WG + G+LG G T L P + + +L+ +Q VACG + TL +
Sbjct: 3043 TWGLGEYGRLGHGDNTTQ--LKP-------KMVKVLLGHRVIQ-VACGSRDAQTLALTDE 3092
Query: 364 GRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVL 411
G + WG +G+ S P ++ G+ V ++ G S L
Sbjct: 3093 GLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLAL 3141
Score = 271 (100.5 bits), Expect = 2.7e-17, Sum P(3) = 2.7e-17
Identities = 79/255 (30%), Positives = 130/255 (50%)
Query: 70 GHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSE----FVKSISCGAHC 125
GH H A+A+ G +++WG + G+LG G + P+ + + V I+CG+
Sbjct: 415 GH-HYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTY 473
Query: 126 TAAIAEPRE--NDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGS--VHVVA 181
+AAI E G + RL G ++ P L G + V+CGS +A
Sbjct: 474 SAAITAEGELYTWGRGNYGRLG-HGSSEDEAIPMLVAGL--KGLKVIDVACGSGDAQTLA 530
Query: 182 LSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSA 241
++E G + +WG +YG+LGRG + +G + P++I+ K D L+ + +V CG S
Sbjct: 531 VTENGQVWSWGDGDYGKLGRGGS-DGCKTPKLIE---KLQD----LD-VVKVRCGSQFSV 581
Query: 242 AVSENGEVYTWGLGSVGQLGHCSLQSGDKELL--PRRVVALDGIFIKDVACGGVHSCALT 299
A++++G+VY+WG G +LGH G +E + P+ + L G + DVA G H ALT
Sbjct: 582 ALTKDGQVYSWGKGDNQRLGH-----GTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALT 636
Query: 300 SKGALYAWGGSQAGQ 314
+++WG + Q
Sbjct: 637 EDSEVHSWGSNDQCQ 651
Score = 270 (100.1 bits), Expect = 3.6e-17, Sum P(3) = 3.6e-17
Identities = 88/293 (30%), Positives = 138/293 (47%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
+ A +Y WG G+ G G L PK + G AG + + IACG ++AA
Sbjct: 421 LAATGEVYSWGCGDGGRLGH-GDTVPLEEPKVISA-FSGKQAGKHV--VHIACGSTYSAA 476
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND 136
+ ++G L+TWG +G+LG G+ E P V L+ V ++CG+ +A EN
Sbjct: 477 ITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVT-EN- 534
Query: 137 GTISTSRLWVWGQNQGSNFPRLFW-GAFTPNTI-------ICQVSCGSVHVVALSECGLL 188
++W WG R G TP I + +V CGS VAL++ G +
Sbjct: 535 -----GQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSVALTKDGQV 589
Query: 189 QAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGE 248
+WG + +LG G T E ++ P++++G + +K+ V+ G H A++E+ E
Sbjct: 590 YSWGKGDNQRLGHG-TEEHVRYPKLLEGL--------QGKKVIDVAAGSTHCLALTEDSE 640
Query: 249 VYTWGLGSVGQLGHC-SLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTS 300
V++WG S Q H +L+ E P + LD I +ACG S A +S
Sbjct: 641 VHSWG--SNDQCQHFDTLRVTKPE--PSALPGLDTKHIVGIACGPAQSFAWSS 689
Score = 265 (98.3 bits), Expect = 1.4e-16, Sum P(3) = 1.4e-16
Identities = 87/307 (28%), Positives = 142/307 (46%)
Query: 20 KSAIYVWGYNHSGQTGR-KGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVA 78
++ ++VWG N Q G KG + +++P F A + + +A G + AV
Sbjct: 2879 RTKVFVWGLNDKDQLGGLKGSK--IKVPS------FSETLSALNV-VQVAGGSKSLFAVT 2929
Query: 79 SDGTLFTWGANEFGQLGDGTEEGRKH-PEKVKQLQSEFVKSI---SCGAHCTAAIAEPRE 134
+G ++ G G+LG G G P ++ L S VK + S G H TA + +
Sbjct: 2930 VEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKV 2989
Query: 135 ND-GTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGY 193
G +L + + + PRL T I ++CGS H AL+ G L WG
Sbjct: 2990 FSWGEGDDGKLGHFSR-MNCDKPRLIEALKTKR--IRDIACGSSHSAALTSSGELYTWGL 3046
Query: 194 NEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCG--EYHSAAVSENGEVYT 251
EYG+LG G L+ P+++K L ++ QV+CG + + A+++ G V++
Sbjct: 3047 GEYGRLGHGDNTTQLK-PKMVK---VLLGH-----RVIQVACGSRDAQTLALTDEGLVFS 3097
Query: 252 WGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQ 311
WG G G+LG + + +P+ + L+G + + CG S ALT G ++ WG
Sbjct: 3098 WGDGDFGKLGRGGSEGCN---IPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGD 3154
Query: 312 AGQLGLG 318
+LG G
Sbjct: 3155 YFRLGHG 3161
Score = 227 (85.0 bits), Expect = 4.8e-12, Sum P(3) = 4.8e-12
Identities = 78/247 (31%), Positives = 112/247 (45%)
Query: 171 QVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKI 230
Q+ G + A++ G L A GY G+LG G T E + P +++ ++K+
Sbjct: 3912 QLIGGEQTLFAVTADGKLYATGYGAGGRLGVGGT-ESVSTPTLLESIQHVF-----IKKV 3965
Query: 231 TQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVAC 290
V+ G H A+S GEVY+WG G+LGH + D+ PR + +L G + DVA
Sbjct: 3966 A-VNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDR---PRVIESLRGTEVVDVAA 4021
Query: 291 GGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVP-NGVQL 349
GG HS +T+ G LY WG + G+LG SD+ + P LV G ++
Sbjct: 4022 GGAHSACVTAAGDLYTWGKGRYGRLG-------------HSDSEDQLKPKLVEALQGHRV 4068
Query: 350 V--ACGH--SHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAG 404
V ACG + TL D + WG YG+ S P +D G V K+ G
Sbjct: 4069 VDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECG 4128
Query: 405 GGHSAVL 411
S L
Sbjct: 4129 SQFSVAL 4135
Score = 205 (77.2 bits), Expect = 8.2e-10, Sum P(3) = 8.2e-10
Identities = 77/271 (28%), Positives = 116/271 (42%)
Query: 56 CPAGANSRWLDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEF 115
C AN IAC + ++ +G ++T N L +G VK
Sbjct: 356 CEGLANLGVTQIACAEKRFLILSRNGRVYTQAYNS-DTLAPQLVQGLASRNIVK------ 408
Query: 116 VKSISCGAHCTAAIAEPREND-GTISTSRLWVWGQNQGSNFPRLFWGAFTPNTI---ICQ 171
+ + S G H A A G RL G P++ AF+ +
Sbjct: 409 IAAHSDGHHYLALAATGEVYSWGCGDGGRLG-HGDTVPLEEPKVI-SAFSGKQAGKHVVH 466
Query: 172 VSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKIT 231
++CGS + A++ G L WG YG+LG G + E P ++ G K L K+
Sbjct: 467 IACGSTYSAAITAEGELYTWGRGNYGRLGHG-SSEDEAIPMLVAGL-KGL-------KVI 517
Query: 232 QVSCG--EYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVA 289
V+CG + + AV+ENG+V++WG G G+LG G K P+ + L + + V
Sbjct: 518 DVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGG-SDGCKT--PKLIEKLQDLDVVKVR 574
Query: 290 CGGVHSCALTSKGALYAWGGSQAGQLGLGPQ 320
CG S ALT G +Y+WG +LG G +
Sbjct: 575 CGSQFSVALTKDGQVYSWGKGDNQRLGHGTE 605
Score = 194 (73.4 bits), Expect = 3.7e-09, Sum P(2) = 3.7e-09
Identities = 74/258 (28%), Positives = 115/258 (44%)
Query: 166 NTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAP 225
N + Q++C + LS G + YN + L P++++G A +
Sbjct: 361 NLGVTQIACAEKRFLILSRNGRVYTQAYNS----------DTL-APQLVQGLA-----SR 404
Query: 226 ELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELL--PRRVVALDGI 283
+ KI S G +H A++ GEVY+WG G G+LGH GD L P+ + A G
Sbjct: 405 NIVKIAAHSDG-HHYLALAATGEVYSWGCGDGGRLGH-----GDTVPLEEPKVISAFSGK 458
Query: 284 ----FIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIP 339
+ +ACG +S A+T++G LY WG G+LG G +E + IP
Sbjct: 459 QAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGS---------SEDEA----IP 505
Query: 340 ILVVP-NGVQL--VACGH--SHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWC 394
+LV G+++ VACG + TL +G++ WG YG+ S P ++
Sbjct: 506 MLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKL 565
Query: 395 VG-EVRKLAAGGGHSAVL 411
+V K+ G S L
Sbjct: 566 QDLDVVKVRCGSQFSVAL 583
Score = 194 (73.4 bits), Expect = 2.1e-08, Sum P(3) = 2.1e-08
Identities = 52/185 (28%), Positives = 89/185 (48%)
Query: 229 KITQVSCG--EYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIK 286
++ QV+CG + + A+++ G V++WG G G+LG + + +P+ + L+G +
Sbjct: 3073 RVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCN---IPQNIERLNGQGVC 3129
Query: 287 DVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNG 346
+ CG S ALT G ++ WG +LG G SD + R ++ G
Sbjct: 3130 QIECGAQFSLALTKSGVVWTWGKGDYFRLGHG------------SDVHVRKPQVVEGLRG 3177
Query: 347 VQLV--ACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAA 403
++V A G H L G+++ WG N +GQ N +T P+ V G+ + ++A
Sbjct: 3178 KKIVHVAVGALHCLAVTDAGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVAC 3237
Query: 404 GGGHS 408
G HS
Sbjct: 3238 GSSHS 3242
Score = 175 (66.7 bits), Expect = 1.4e-06, Sum P(3) = 1.4e-06
Identities = 70/247 (28%), Positives = 102/247 (41%)
Query: 140 STSRLWVWGQNQGSNFPRLFWGAFTP---NTIICQVSCGSV--HVVALSECGLLQAWGYN 194
+T ++ WG G RL G P +I S HVV ++ CG +
Sbjct: 423 ATGEVYSWGCGDGG---RLGHGDTVPLEEPKVISAFSGKQAGKHVVHIA-CGSTYSAAIT 478
Query: 195 EYGQL---GRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCG--EYHSAAVSENGEV 249
G+L GRG G + + L K+ V+CG + + AV+ENG+V
Sbjct: 479 AEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGL-KVIDVACGSGDAQTLAVTENGQV 537
Query: 250 YTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGG 309
++WG G G+LG G K P+ + L + + V CG S ALT G +Y+WG
Sbjct: 538 WSWGDGDYGKLGRGG-SDGCKT--PKLIEKLQDLDVVKVRCGSQFSVALTKDGQVYSWGK 594
Query: 310 SQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGW 369
+LG G + E Y + + L + VA G +H L D +H W
Sbjct: 595 GDNQRLGHGTE---------EHVRYPKLLEGLQGKKVID-VAAGSTHCLALTEDSEVHSW 644
Query: 370 GYNSYGQ 376
G N Q
Sbjct: 645 GSNDQCQ 651
Score = 172 (65.6 bits), Expect = 4.7e-06, Sum P(3) = 4.7e-06
Identities = 46/131 (35%), Positives = 64/131 (48%)
Query: 230 ITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVA 289
+ +V CG S A++++G VYTWG G +LGH S D PR+V L G + +A
Sbjct: 4122 VVKVECGSQFSVALTKSGAVYTWGKGDYHRLGH---GSDDHVRRPRQVQGLQGKKVIAIA 4178
Query: 290 CGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQL 349
G +H + G +Y WG + GQLG G T + P R + L V
Sbjct: 4179 TGSLHCVCCSEDGEVYTWGDNDEGQLGDGT-TNAIQR-P-------RLVAALQGKK-VNR 4228
Query: 350 VACGHSHTLVY 360
VACG +HTL +
Sbjct: 4229 VACGSAHTLAW 4239
Score = 165 (63.1 bits), Expect = 3.6e-05, Sum P(4) = 3.6e-05
Identities = 45/131 (34%), Positives = 64/131 (48%)
Query: 230 ITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVA 289
+ Q+ CG S A++++G V+TWG G +LGH S K P+ V L G I VA
Sbjct: 3128 VCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRK---PQVVEGLRGKKIVHVA 3184
Query: 290 CGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQL 349
G +H A+T G +YAWG + GQ G G T N T + + +
Sbjct: 3185 VGALHCLAVTDAGQVYAWGDNDHGQQGNGTTT------VNRKPTLVQGLE----GQKITR 3234
Query: 350 VACGHSHTLVY 360
VACG SH++ +
Sbjct: 3235 VACGSSHSVAW 3245
Score = 43 (20.2 bits), Expect = 5.2e-22, Sum P(3) = 5.2e-22
Identities = 5/12 (41%), Positives = 10/12 (83%)
Query: 360 YMRDGRIHGWGY 371
++ DG ++GWG+
Sbjct: 3614 FISDGSVNGWGW 3625
Score = 41 (19.5 bits), Expect = 3.3e-17, Sum P(3) = 3.3e-17
Identities = 8/18 (44%), Positives = 12/18 (66%)
Query: 115 FVKSISCGAHCTAAIAEP 132
FV+SI+ H AA++ P
Sbjct: 1945 FVRSIALTPHMCAALSSP 1962
Score = 37 (18.1 bits), Expect = 5.2e-22, Sum P(3) = 5.2e-22
Identities = 6/12 (50%), Positives = 9/12 (75%)
Query: 404 GGGHSAVLADAC 415
GGG+S +A+ C
Sbjct: 4402 GGGYSESIAEIC 4413
Score = 37 (18.1 bits), Expect = 5.2e-22, Sum P(3) = 5.2e-22
Identities = 6/12 (50%), Positives = 10/12 (83%)
Query: 446 SEALARLCERLR 457
SE++A +CE L+
Sbjct: 4406 SESIAEICEELQ 4417
>UNIPROTKB|E2RDC2 [details] [associations]
symbol:HERC2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0032183 "SUMO binding" evidence=IEA]
[GO:0031625 "ubiquitin protein ligase binding" evidence=IEA]
[GO:0007283 "spermatogenesis" evidence=IEA] [GO:0006281 "DNA
repair" evidence=IEA] [GO:0005743 "mitochondrial inner membrane"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0020037 "heme
binding" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
Pfam:PF00632 InterPro:IPR000433 InterPro:IPR000569
InterPro:IPR001199 InterPro:IPR010606 Pfam:PF00173 Pfam:PF00569
Pfam:PF06701 PROSITE:PS01357 PROSITE:PS50135 PROSITE:PS50237
PROSITE:PS50255 PROSITE:PS51416 SMART:SM00119 SMART:SM00291
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005634 GO:GO:0005743
GO:GO:0046872 GO:GO:0008270 GO:GO:0006281 GO:GO:0007283
GO:GO:0020037 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
Gene3D:3.10.120.10 SUPFAM:SSF55856 InterPro:IPR008979
SUPFAM:SSF49785 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 InterPro:IPR004939 Pfam:PF03256 PROSITE:PS51284
Gene3D:2.30.30.30 InterPro:IPR021097 InterPro:IPR014722
Pfam:PF11515 SUPFAM:SSF56204 GeneTree:ENSGT00700000104208 CTD:8924
KO:K10595 OMA:QLAFTRD InterPro:IPR006624 SMART:SM00706
EMBL:AAEX03002160 EMBL:AAEX03002161 EMBL:AAEX03002162
RefSeq:XP_536160.2 ProteinModelPortal:E2RDC2
Ensembl:ENSCAFT00000015697 GeneID:479005 KEGG:cfa:479005
Uniprot:E2RDC2
Length = 4837
Score = 309 (113.8 bits), Expect = 5.5e-22, Sum P(3) = 5.5e-22
Identities = 90/284 (31%), Positives = 134/284 (47%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ WG G G+ G ++ K P L A R DIACG H+AA+ S G
Sbjct: 3069 VFSWG---EGDDGKLGHFSRMNCDK---PRLI--EALKTKRIRDIACGSSHSAALTSSGE 3120
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREN------D 136
L+TWG E+G+LG G + P+ VK L V ++CG+ +A E D
Sbjct: 3121 LYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGD 3180
Query: 137 GTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEY 196
G +L G ++G N P+ +CQ+ CG+ +AL++ G++ WG +Y
Sbjct: 3181 GDFG--KLGRGG-SEGCNIPQNIERLNGQG--VCQIECGAQFSLALTKSGVVWTWGKGDY 3235
Query: 197 GQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGS 256
+LG G ++ P+V++G +KI V+ G H AV++ G+VY WG
Sbjct: 3236 FRLGHGSDVH-VRKPQVVEGLRG--------KKIVHVAVGALHCLAVTDAGQVYAWGDND 3286
Query: 257 VGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTS 300
GQ G+ + K P V L+G I VACG HS A T+
Sbjct: 3287 HGQQGNGTTTVNRK---PTLVQGLEGQKITRVACGSSHSVAWTT 3327
Score = 303 (111.7 bits), Expect = 1.7e-21, Sum P(2) = 1.7e-21
Identities = 89/296 (30%), Positives = 137/296 (46%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
+ ++ +Y WG G+ G R R P+ + L G +D+A G H+A
Sbjct: 4057 LSSEGEVYSWGEAEDGKLGHGNRSPCDR-PRVIE-SLRGIEV------VDVAAGGAHSAC 4108
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND 136
V + G L+TWG +G+LG E + P+ V+ LQ V ++CG+ + +D
Sbjct: 4109 VTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDVACGSGDAQTLC--LTDD 4166
Query: 137 GTISTSRLWVWGQNQGSNFPRLFW-GAFTPNTI-------ICQVSCGSVHVVALSECGLL 188
T+ W WG R G P I + +V CGS VAL++ G +
Sbjct: 4167 DTV-----WSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAV 4221
Query: 189 QAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGE 248
WG +Y +LG G + + ++ PR ++G + +K+ ++ G H +E+GE
Sbjct: 4222 YTWGKGDYHRLGHG-SDDHVRRPRQVQGL--------QGKKVIAIATGSLHCVCCTEDGE 4272
Query: 249 VYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCAL-TSKGA 303
VYTWG GQLG + + + PR V AL G + VACG H+ A TSK A
Sbjct: 4273 VYTWGDNDEGQLGDGTTNAIQR---PRLVAALQGKKVNRVACGSAHTLAWSTSKPA 4325
Score = 300 (110.7 bits), Expect = 4.0e-21, Sum P(2) = 4.0e-21
Identities = 106/407 (26%), Positives = 177/407 (43%)
Query: 12 RPVD-NIPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACG 70
RP D + A + ++G+ H+ + G+ G ++ P C A A R + + G
Sbjct: 3943 RPDDWTLSAGGSGTIYGWGHNHR-GQLGGIEGAKVKVPTP-----CEALATLRPVQLIGG 3996
Query: 71 HEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSI---SCGAHCTA 127
+ AV +DG L+ G G+LG G E P ++ +Q F+K + S G HC A
Sbjct: 3997 EQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLA 4056
Query: 128 AIAEPREND-GTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECG 186
+E G +L G + PR+ + V+ G H ++ G
Sbjct: 4057 LSSEGEVYSWGEAEDGKLG-HGNRSPCDRPRVIESL--RGIEVVDVAAGGAHSACVTAAG 4113
Query: 187 LLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCG--EYHSAAVS 244
L WG YG+LG + + L+ P+++ EA + ++ V+CG + + ++
Sbjct: 4114 DLYTWGKGRYGRLGHSDSEDQLK-PKLV--------EALQGHRVVDVACGSGDAQTLCLT 4164
Query: 245 ENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGAL 304
++ V++WG G G+LG G K +P ++ +L G+ + V CG S ALT GA+
Sbjct: 4165 DDDTVWSWGDGDYGKLGRGG-SDGCK--VPMKIDSLTGLGVVKVECGSQFSVALTKSGAV 4221
Query: 305 YAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVAC--GHSHTLVYMR 362
Y WG +LG G SD + R + G +++A G H +
Sbjct: 4222 YTWGKGDYHRLGHG------------SDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTE 4269
Query: 363 DGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHS 408
DG ++ WG N GQ + + P V G+ V ++A G H+
Sbjct: 4270 DGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHT 4316
Score = 300 (110.7 bits), Expect = 8.0e-21, Sum P(3) = 8.0e-21
Identities = 91/311 (29%), Positives = 152/311 (48%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
+ + +Y G +G+ G + IP+Q+ + + + + G H A
Sbjct: 3008 VTVEGKVYACGEATNGRLGLGLSSGTVPIPRQIT-----ALSSYVVKKVAVHSGGRHATA 3062
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND 136
+ DG +F+WG + G+LG + P ++ L+++ ++ I+CG+ +AA+ +
Sbjct: 3063 LTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALT----SS 3118
Query: 137 GTISTSRLWVWGQ-NQGSNFPRL---FWGAFTPNTIICQVSCGS--VHVVALSECGLLQA 190
G + T L +G+ G N +L + +I QV+CGS +AL++ GL+ +
Sbjct: 3119 GELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVI-QVACGSRDAQTLALTDEGLVFS 3177
Query: 191 WGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVY 250
WG ++G+LGRG + EG P+ I E + + Q+ CG S A++++G V+
Sbjct: 3178 WGDGDFGKLGRGGS-EGCNIPQNI--------ERLNGQGVCQIECGAQFSLALTKSGVVW 3228
Query: 251 TWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGS 310
TWG G +LGH S K P+ V L G I VA G +H A+T G +YAWG +
Sbjct: 3229 TWGKGDYFRLGHGSDVHVRK---PQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAWGDN 3285
Query: 311 QAGQLGLGPQT 321
GQ G G T
Sbjct: 3286 DHGQQGNGTTT 3296
Score = 294 (108.6 bits), Expect = 2.1e-20, Sum P(2) = 2.1e-20
Identities = 78/276 (28%), Positives = 131/276 (47%)
Query: 143 RLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRG 202
R++ N + P+L G + N + H +AL+ G + +WG + G+LG G
Sbjct: 472 RVYTQAYNSDTLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHG 531
Query: 203 ITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGH 262
T L+ P+VI ++ +A + + ++CG +SAA++ GE+YTWG G+ G+LGH
Sbjct: 532 DTVP-LEEPKVISAFSG--KQAGK--HVVHIACGSTYSAAITAEGELYTWGRGNYGRLGH 586
Query: 263 CSLQSGDKELLPRRVVALDGIFIKDVACGG--VHSCALTSKGALYAWGGSQAGQLGLGPQ 320
S + E +P V L G+ + DVACG + A+T G +++WG G+LG G
Sbjct: 587 ---GSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGS 643
Query: 321 T--RSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAA 378
++ LI D V V CG ++ +DG+++ WG +
Sbjct: 644 DGCKTPKLIEKLQDL------------DVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLG 691
Query: 379 NEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLAD 413
+ + YP ++ G+ V +AAG H L +
Sbjct: 692 HGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTE 727
Score = 270 (100.1 bits), Expect = 3.8e-17, Sum P(3) = 3.8e-17
Identities = 79/255 (30%), Positives = 130/255 (50%)
Query: 70 GHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSE----FVKSISCGAHC 125
GH H A+A+ G +++WG + G+LG G + P+ + + V I+CG+
Sbjct: 505 GH-HYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTY 563
Query: 126 TAAIAEPRE--NDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGS--VHVVA 181
+AAI E G + RL G ++ P L G + V+CGS +A
Sbjct: 564 SAAITAEGELYTWGRGNYGRLG-HGSSEDEAIPMLVAGL--KGLKVIDVACGSGDAQTLA 620
Query: 182 LSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSA 241
++E G + +WG +YG+LGRG + +G + P++I+ K D L+ + +V CG S
Sbjct: 621 VTENGQVWSWGDGDYGKLGRGGS-DGCKTPKLIE---KLQD----LD-VVKVRCGSQFSI 671
Query: 242 AVSENGEVYTWGLGSVGQLGHCSLQSGDKELL--PRRVVALDGIFIKDVACGGVHSCALT 299
A++++G+VY+WG G +LGH G +E + P+ + L G + DVA G H ALT
Sbjct: 672 ALTKDGQVYSWGKGDNQRLGH-----GTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALT 726
Query: 300 SKGALYAWGGSQAGQ 314
+++WG + Q
Sbjct: 727 EDSEVHSWGSNDQCQ 741
Score = 270 (100.1 bits), Expect = 4.8e-17, Sum P(3) = 4.8e-17
Identities = 89/289 (30%), Positives = 143/289 (49%)
Query: 134 ENDGTISTSRLWVWGQNQ-----GSNFPRLFWGAF--TPNTI-ICQVSCGSVHVVALSEC 185
E+ TI T +++VWG N G ++ +F T + + + QV+ GS + A++
Sbjct: 2953 ESAATIRT-KVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVE 3011
Query: 186 GLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSE 245
G + A G G+LG G++ + PR I + ++ ++K+ V G H+ A++
Sbjct: 3012 GKVYACGEATNGRLGLGLSSGTVPIPRQITALSSYV-----VKKVA-VHSGGRHATALTV 3065
Query: 246 NGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALY 305
+G+V++WG G G+LGH S + DK PR + AL I+D+ACG HS ALTS G LY
Sbjct: 3066 DGKVFSWGEGDDGKLGHFSRMNCDK---PRLIEALKTKRIRDIACGSSHSAALTSSGELY 3122
Query: 306 AWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGH--SHTLVYMRD 363
WG + G+LG G T L P + + +L+ +Q VACG + TL +
Sbjct: 3123 TWGLGEYGRLGHGDNTTQ--LKP-------KMVKVLLGHRVIQ-VACGSRDAQTLALTDE 3172
Query: 364 GRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVL 411
G + WG +G+ S P ++ G+ V ++ G S L
Sbjct: 3173 GLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLAL 3221
Score = 269 (99.8 bits), Expect = 4.9e-17, Sum P(3) = 4.9e-17
Identities = 87/293 (29%), Positives = 138/293 (47%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
+ A +Y WG G+ G G L PK + G AG + + IACG ++AA
Sbjct: 511 LAATGEVYSWGCGDGGRLGH-GDTVPLEEPKVISA-FSGKQAGKHV--VHIACGSTYSAA 566
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND 136
+ ++G L+TWG +G+LG G+ E P V L+ V ++CG+ +A EN
Sbjct: 567 ITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVT-EN- 624
Query: 137 GTISTSRLWVWGQNQGSNFPRLFW-GAFTPNTI-------ICQVSCGSVHVVALSECGLL 188
++W WG R G TP I + +V CGS +AL++ G +
Sbjct: 625 -----GQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQV 679
Query: 189 QAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGE 248
+WG + +LG G T E ++ P++++G + +K+ V+ G H A++E+ E
Sbjct: 680 YSWGKGDNQRLGHG-TEEHVRYPKLLEGL--------QGKKVIDVAAGSTHCLALTEDSE 730
Query: 249 VYTWGLGSVGQLGHC-SLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTS 300
V++WG S Q H +L+ E P + LD I +ACG S A +S
Sbjct: 731 VHSWG--SNDQCQHFDTLRVTKPE--PAALPGLDTKHIVGIACGPAQSFAWSS 779
Score = 265 (98.3 bits), Expect = 1.4e-16, Sum P(3) = 1.4e-16
Identities = 87/307 (28%), Positives = 142/307 (46%)
Query: 20 KSAIYVWGYNHSGQTGR-KGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVA 78
++ ++VWG N Q G KG + +++P F A + + +A G + AV
Sbjct: 2959 RTKVFVWGLNDKDQLGGLKGSK--IKVPS------FSETLSALNV-VQVAGGSKSLFAVT 3009
Query: 79 SDGTLFTWGANEFGQLGDGTEEGRKH-PEKVKQLQSEFVKSI---SCGAHCTAAIAEPRE 134
+G ++ G G+LG G G P ++ L S VK + S G H TA + +
Sbjct: 3010 VEGKVYACGEATNGRLGLGLSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKV 3069
Query: 135 ND-GTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGY 193
G +L + + + PRL T I ++CGS H AL+ G L WG
Sbjct: 3070 FSWGEGDDGKLGHFSR-MNCDKPRLIEALKTKR--IRDIACGSSHSAALTSSGELYTWGL 3126
Query: 194 NEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCG--EYHSAAVSENGEVYT 251
EYG+LG G L+ P+++K L ++ QV+CG + + A+++ G V++
Sbjct: 3127 GEYGRLGHGDNTTQLK-PKMVK---VLLGH-----RVIQVACGSRDAQTLALTDEGLVFS 3177
Query: 252 WGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQ 311
WG G G+LG + + +P+ + L+G + + CG S ALT G ++ WG
Sbjct: 3178 WGDGDFGKLGRGGSEGCN---IPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGD 3234
Query: 312 AGQLGLG 318
+LG G
Sbjct: 3235 YFRLGHG 3241
Score = 232 (86.7 bits), Expect = 1.1e-12, Sum P(3) = 1.1e-12
Identities = 79/247 (31%), Positives = 113/247 (45%)
Query: 171 QVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKI 230
Q+ G + A++ G L A GY G+LG G T E + P +++ ++K+
Sbjct: 3992 QLIGGEQTLFAVTADGKLYATGYGAGGRLGIGGT-ESVSTPTLLESIQHVF-----IKKV 4045
Query: 231 TQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVAC 290
V+ G H A+S GEVY+WG G+LGH + D+ PR + +L GI + DVA
Sbjct: 4046 A-VNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDR---PRVIESLRGIEVVDVAA 4101
Query: 291 GGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVP-NGVQL 349
GG HS +T+ G LY WG + G+LG SD+ + P LV G ++
Sbjct: 4102 GGAHSACVTAAGDLYTWGKGRYGRLG-------------HSDSEDQLKPKLVEALQGHRV 4148
Query: 350 V--ACGH--SHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAG 404
V ACG + TL D + WG YG+ S P +D G V K+ G
Sbjct: 4149 VDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECG 4208
Query: 405 GGHSAVL 411
S L
Sbjct: 4209 SQFSVAL 4215
Score = 205 (77.2 bits), Expect = 8.6e-10, Sum P(3) = 8.6e-10
Identities = 77/271 (28%), Positives = 116/271 (42%)
Query: 56 CPAGANSRWLDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEF 115
C AN IAC + ++ +G ++T N L +G VK
Sbjct: 446 CEGLANLGVTQIACAEKRFLILSRNGRVYTQAYNS-DTLAPQLVQGLASRNIVK------ 498
Query: 116 VKSISCGAHCTAAIAEPREND-GTISTSRLWVWGQNQGSNFPRLFWGAFTPNTI---ICQ 171
+ + S G H A A G RL G P++ AF+ +
Sbjct: 499 IAAHSDGHHYLALAATGEVYSWGCGDGGRLG-HGDTVPLEEPKVI-SAFSGKQAGKHVVH 556
Query: 172 VSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKIT 231
++CGS + A++ G L WG YG+LG G + E P ++ G K L K+
Sbjct: 557 IACGSTYSAAITAEGELYTWGRGNYGRLGHG-SSEDEAIPMLVAGL-KGL-------KVI 607
Query: 232 QVSCG--EYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVA 289
V+CG + + AV+ENG+V++WG G G+LG G K P+ + L + + V
Sbjct: 608 DVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGG-SDGCKT--PKLIEKLQDLDVVKVR 664
Query: 290 CGGVHSCALTSKGALYAWGGSQAGQLGLGPQ 320
CG S ALT G +Y+WG +LG G +
Sbjct: 665 CGSQFSIALTKDGQVYSWGKGDNQRLGHGTE 695
Score = 194 (73.4 bits), Expect = 1.7e-08, Sum P(3) = 1.7e-08
Identities = 52/185 (28%), Positives = 89/185 (48%)
Query: 229 KITQVSCG--EYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIK 286
++ QV+CG + + A+++ G V++WG G G+LG + + +P+ + L+G +
Sbjct: 3153 RVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCN---IPQNIERLNGQGVC 3209
Query: 287 DVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNG 346
+ CG S ALT G ++ WG +LG G SD + R ++ G
Sbjct: 3210 QIECGAQFSLALTKSGVVWTWGKGDYFRLGHG------------SDVHVRKPQVVEGLRG 3257
Query: 347 VQLV--ACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAA 403
++V A G H L G+++ WG N +GQ N +T P+ V G+ + ++A
Sbjct: 3258 KKIVHVAVGALHCLAVTDAGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVAC 3317
Query: 404 GGGHS 408
G HS
Sbjct: 3318 GSSHS 3322
Score = 193 (73.0 bits), Expect = 4.9e-09, Sum P(2) = 4.9e-09
Identities = 74/258 (28%), Positives = 115/258 (44%)
Query: 166 NTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAP 225
N + Q++C + LS G + YN + L P++++G A +
Sbjct: 451 NLGVTQIACAEKRFLILSRNGRVYTQAYNS----------DTL-APQLVQGLA-----SR 494
Query: 226 ELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELL--PRRVVALDGI 283
+ KI S G +H A++ GEVY+WG G G+LGH GD L P+ + A G
Sbjct: 495 NIVKIAAHSDG-HHYLALAATGEVYSWGCGDGGRLGH-----GDTVPLEEPKVISAFSGK 548
Query: 284 ----FIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIP 339
+ +ACG +S A+T++G LY WG G+LG G +E + IP
Sbjct: 549 QAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGS---------SEDEA----IP 595
Query: 340 ILVVP-NGVQL--VACGH--SHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWC 394
+LV G+++ VACG + TL +G++ WG YG+ S P ++
Sbjct: 596 MLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKL 655
Query: 395 VG-EVRKLAAGGGHSAVL 411
+V K+ G S L
Sbjct: 656 QDLDVVKVRCGSQFSIAL 673
Score = 176 (67.0 bits), Expect = 1.5e-06, Sum P(3) = 1.5e-06
Identities = 47/131 (35%), Positives = 64/131 (48%)
Query: 230 ITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVA 289
+ +V CG S A++++G VYTWG G +LGH S D PR+V L G + +A
Sbjct: 4202 VVKVECGSQFSVALTKSGAVYTWGKGDYHRLGH---GSDDHVRRPRQVQGLQGKKVIAIA 4258
Query: 290 CGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQL 349
G +H T G +Y WG + GQLG G T + P R + L V
Sbjct: 4259 TGSLHCVCCTEDGEVYTWGDNDEGQLGDGT-TNAIQR-P-------RLVAALQGKK-VNR 4308
Query: 350 VACGHSHTLVY 360
VACG +HTL +
Sbjct: 4309 VACGSAHTLAW 4319
Score = 175 (66.7 bits), Expect = 1.5e-06, Sum P(3) = 1.5e-06
Identities = 70/247 (28%), Positives = 102/247 (41%)
Query: 140 STSRLWVWGQNQGSNFPRLFWGAFTP---NTIICQVSCGSV--HVVALSECGLLQAWGYN 194
+T ++ WG G RL G P +I S HVV ++ CG +
Sbjct: 513 ATGEVYSWGCGDGG---RLGHGDTVPLEEPKVISAFSGKQAGKHVVHIA-CGSTYSAAIT 568
Query: 195 EYGQL---GRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCG--EYHSAAVSENGEV 249
G+L GRG G + + L K+ V+CG + + AV+ENG+V
Sbjct: 569 AEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGL-KVIDVACGSGDAQTLAVTENGQV 627
Query: 250 YTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGG 309
++WG G G+LG G K P+ + L + + V CG S ALT G +Y+WG
Sbjct: 628 WSWGDGDYGKLGRGG-SDGCKT--PKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGK 684
Query: 310 SQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGW 369
+LG G + E Y + + L + VA G +H L D +H W
Sbjct: 685 GDNQRLGHGTE---------EHVRYPKLLEGLQGKKVID-VAAGSTHCLALTEDSEVHSW 734
Query: 370 GYNSYGQ 376
G N Q
Sbjct: 735 GSNDQCQ 741
Score = 165 (63.1 bits), Expect = 3.1e-05, Sum P(4) = 3.1e-05
Identities = 45/131 (34%), Positives = 64/131 (48%)
Query: 230 ITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVA 289
+ Q+ CG S A++++G V+TWG G +LGH S K P+ V L G I VA
Sbjct: 3208 VCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRK---PQVVEGLRGKKIVHVA 3264
Query: 290 CGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQL 349
G +H A+T G +YAWG + GQ G G T N T + + +
Sbjct: 3265 VGALHCLAVTDAGQVYAWGDNDHGQQGNGTTT------VNRKPTLVQGLE----GQKITR 3314
Query: 350 VACGHSHTLVY 360
VACG SH++ +
Sbjct: 3315 VACGSSHSVAW 3325
Score = 43 (20.2 bits), Expect = 5.5e-22, Sum P(3) = 5.5e-22
Identities = 5/12 (41%), Positives = 10/12 (83%)
Query: 360 YMRDGRIHGWGY 371
++ DG ++GWG+
Sbjct: 3694 FISDGSVNGWGW 3705
Score = 42 (19.8 bits), Expect = 4.8e-17, Sum P(3) = 4.8e-17
Identities = 8/19 (42%), Positives = 13/19 (68%)
Query: 115 FVKSISCGAHCTAAIAEPR 133
FV+SI+ H AA++ P+
Sbjct: 2030 FVRSIALTPHMCAALSSPQ 2048
Score = 37 (18.1 bits), Expect = 5.5e-22, Sum P(3) = 5.5e-22
Identities = 6/12 (50%), Positives = 9/12 (75%)
Query: 404 GGGHSAVLADAC 415
GGG+S +A+ C
Sbjct: 4482 GGGYSESIAEIC 4493
Score = 37 (18.1 bits), Expect = 5.5e-22, Sum P(3) = 5.5e-22
Identities = 6/12 (50%), Positives = 10/12 (83%)
Query: 446 SEALARLCERLR 457
SE++A +CE L+
Sbjct: 4486 SESIAEICEELQ 4497
>UNIPROTKB|E1B782 [details] [associations]
symbol:HERC2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0032183 "SUMO binding" evidence=IEA] [GO:0031625
"ubiquitin protein ligase binding" evidence=IEA] [GO:0007283
"spermatogenesis" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0005743 "mitochondrial inner membrane"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0020037 "heme
binding" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
Pfam:PF00632 InterPro:IPR000433 InterPro:IPR000569
InterPro:IPR001199 InterPro:IPR010606 Pfam:PF00173 Pfam:PF00569
Pfam:PF06701 PROSITE:PS01357 PROSITE:PS50135 PROSITE:PS50237
PROSITE:PS50255 PROSITE:PS51416 SMART:SM00119 SMART:SM00291
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005634 GO:GO:0005743
GO:GO:0046872 GO:GO:0008270 GO:GO:0006281 GO:GO:0007283
GO:GO:0020037 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
Gene3D:3.10.120.10 SUPFAM:SSF55856 InterPro:IPR008979
SUPFAM:SSF49785 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 InterPro:IPR004939 Pfam:PF03256 PROSITE:PS51284
Gene3D:2.30.30.30 InterPro:IPR021097 InterPro:IPR014722
Pfam:PF11515 SUPFAM:SSF56204 GeneTree:ENSGT00700000104208
OMA:QLAFTRD InterPro:IPR006624 SMART:SM00706 EMBL:DAAA02003804
EMBL:DAAA02003805 IPI:IPI00713038 Ensembl:ENSBTAT00000018496
Uniprot:E1B782
Length = 4847
Score = 309 (113.8 bits), Expect = 5.5e-22, Sum P(3) = 5.5e-22
Identities = 90/284 (31%), Positives = 134/284 (47%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ WG G G+ G ++ K P L A R DIACG H+AA+ S G
Sbjct: 3079 VFSWG---EGDDGKLGHFSRMNCDK---PRLI--EALKTKRIRDIACGSSHSAALTSSGE 3130
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREN------D 136
L+TWG E+G+LG G + P+ VK L V ++CG+ +A E D
Sbjct: 3131 LYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGD 3190
Query: 137 GTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEY 196
G +L G ++G N P+ +CQ+ CG+ +AL++ G++ WG +Y
Sbjct: 3191 GDFG--KLGRGG-SEGCNIPQNIERLNGQG--VCQIECGAQFSLALTKSGVVWTWGKGDY 3245
Query: 197 GQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGS 256
+LG G ++ P+V++G +KI V+ G H AV++ G+VY WG
Sbjct: 3246 FRLGHGSDVH-VRKPQVVEGLRG--------KKIVHVAVGALHCLAVTDAGQVYAWGDND 3296
Query: 257 VGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTS 300
GQ G+ + K P V L+G I VACG HS A T+
Sbjct: 3297 HGQQGNGTTTVNRK---PTLVQGLEGQKITRVACGSSHSVAWTT 3337
Score = 306 (112.8 bits), Expect = 7.5e-22, Sum P(2) = 7.5e-22
Identities = 90/296 (30%), Positives = 137/296 (46%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
+ ++ +Y WG G+ G R R P+ + L G +D+A G H+A
Sbjct: 4067 LSSEGEVYSWGEAEDGKLGHGNRSPCDR-PRVIE-SLRGTEV------VDVAAGGAHSAC 4118
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND 136
V + G L+TWG +G+LG E + P+ V+ LQ V ++CG+ + +D
Sbjct: 4119 VTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDVACGSGDAQTLC--LTDD 4176
Query: 137 GTISTSRLWVWGQNQGSNFPRLFW-GAFTPNTI-------ICQVSCGSVHVVALSECGLL 188
T+ W WG R G P I + +V CGS VAL++ G +
Sbjct: 4177 DTV-----WSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAV 4231
Query: 189 QAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGE 248
WG +Y +LG G + + ++ PR ++G + +K+ ++ G H SE+GE
Sbjct: 4232 YTWGKGDYHRLGHG-SDDHVRRPRQVQGL--------QGKKVIAIATGSLHCVCCSEDGE 4282
Query: 249 VYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCAL-TSKGA 303
VYTWG GQLG + + + PR V AL G + VACG H+ A TSK A
Sbjct: 4283 VYTWGDNDEGQLGDGTTNAIQR---PRLVAALQGKKVNRVACGSAHTLAWSTSKPA 4335
Score = 304 (112.1 bits), Expect = 1.3e-21, Sum P(2) = 1.3e-21
Identities = 107/407 (26%), Positives = 178/407 (43%)
Query: 12 RPVD-NIPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACG 70
RP D + A + ++G+ H+ + G+ G ++ P C A A R + + G
Sbjct: 3953 RPDDWTLSAGGSGTIYGWGHNHR-GQLGGIEGAKVKVPTP-----CEALAALRPVQLIGG 4006
Query: 71 HEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSI---SCGAHCTA 127
+ AV +DG L+ G G+LG G E P ++ +Q F+K + S G HC A
Sbjct: 4007 EQTLFAVTADGKLYATGYGAGGRLGVGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLA 4066
Query: 128 AIAEPREND-GTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECG 186
+E G +L G + PR+ T + V+ G H ++ G
Sbjct: 4067 LSSEGEVYSWGEAEDGKLG-HGNRSPCDRPRVIESL--RGTEVVDVAAGGAHSACVTAAG 4123
Query: 187 LLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCG--EYHSAAVS 244
L WG YG+LG + + L+ P+++ EA + ++ V+CG + + ++
Sbjct: 4124 DLYTWGKGRYGRLGHSDSEDQLK-PKLV--------EALQGHRVVDVACGSGDAQTLCLT 4174
Query: 245 ENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGAL 304
++ V++WG G G+LG G K +P ++ +L G+ + V CG S ALT GA+
Sbjct: 4175 DDDTVWSWGDGDYGKLGRGG-SDGCK--VPMKIDSLTGLGVVKVECGSQFSVALTKSGAV 4231
Query: 305 YAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVAC--GHSHTLVYMR 362
Y WG +LG G SD + R + G +++A G H +
Sbjct: 4232 YTWGKGDYHRLGHG------------SDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCSE 4279
Query: 363 DGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHS 408
DG ++ WG N GQ + + P V G+ V ++A G H+
Sbjct: 4280 DGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHT 4326
Score = 300 (110.7 bits), Expect = 8.1e-21, Sum P(3) = 8.1e-21
Identities = 91/311 (29%), Positives = 152/311 (48%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
+ + +Y G +G+ G + IP+Q+ + + + + G H A
Sbjct: 3018 VTVEGKVYACGEATNGRLGLGISSGTVPIPRQIT-----ALSSYVVKKVAVHSGGRHATA 3072
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND 136
+ DG +F+WG + G+LG + P ++ L+++ ++ I+CG+ +AA+ +
Sbjct: 3073 LTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALT----SS 3128
Query: 137 GTISTSRLWVWGQ-NQGSNFPRL---FWGAFTPNTIICQVSCGS--VHVVALSECGLLQA 190
G + T L +G+ G N +L + +I QV+CGS +AL++ GL+ +
Sbjct: 3129 GELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVI-QVACGSRDAQTLALTDEGLVFS 3187
Query: 191 WGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVY 250
WG ++G+LGRG + EG P+ I E + + Q+ CG S A++++G V+
Sbjct: 3188 WGDGDFGKLGRGGS-EGCNIPQNI--------ERLNGQGVCQIECGAQFSLALTKSGVVW 3238
Query: 251 TWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGS 310
TWG G +LGH S K P+ V L G I VA G +H A+T G +YAWG +
Sbjct: 3239 TWGKGDYFRLGHGSDVHVRK---PQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAWGDN 3295
Query: 311 QAGQLGLGPQT 321
GQ G G T
Sbjct: 3296 DHGQQGNGTTT 3306
Score = 293 (108.2 bits), Expect = 2.8e-20, Sum P(2) = 2.8e-20
Identities = 78/276 (28%), Positives = 131/276 (47%)
Query: 143 RLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRG 202
R++ N + P+L G + N + H +AL+ G + +WG + G+LG G
Sbjct: 472 RVYTQAYNSDTLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHG 531
Query: 203 ITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGH 262
T L+ P+VI ++ +A + + ++CG +SAA++ GE+YTWG G+ G+LGH
Sbjct: 532 DTVP-LEEPKVISAFSG--KQAGK--HVVHIACGSTYSAAITAEGELYTWGRGNYGRLGH 586
Query: 263 CSLQSGDKELLPRRVVALDGIFIKDVACGG--VHSCALTSKGALYAWGGSQAGQLGLGPQ 320
S + E +P V L G+ + DVACG + A+T G +++WG G+LG G
Sbjct: 587 ---GSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGS 643
Query: 321 T--RSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAA 378
++ LI D V V CG ++ +DG+++ WG +
Sbjct: 644 DGCKTPKLIEKLQDL------------DVVKVRCGSQFSVALTKDGQVYSWGKGDNQRLG 691
Query: 379 NEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLAD 413
+ + YP ++ G+ V +AAG H L +
Sbjct: 692 HGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTE 727
Score = 272 (100.8 bits), Expect = 3.5e-17, Sum P(3) = 3.5e-17
Identities = 90/289 (31%), Positives = 143/289 (49%)
Query: 134 ENDGTISTSRLWVWGQNQ-----GSNFPRLFWGAF--TPNTI-ICQVSCGSVHVVALSEC 185
E+ TI T +++VWG N G ++ +F T + + + QV+ GS + A++
Sbjct: 2963 ESAATIRT-KVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVE 3021
Query: 186 GLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSE 245
G + A G G+LG GI+ + PR I + ++ ++K+ V G H+ A++
Sbjct: 3022 GKVYACGEATNGRLGLGISSGTVPIPRQITALSSYV-----VKKVA-VHSGGRHATALTV 3075
Query: 246 NGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALY 305
+G+V++WG G G+LGH S + DK PR + AL I+D+ACG HS ALTS G LY
Sbjct: 3076 DGKVFSWGEGDDGKLGHFSRMNCDK---PRLIEALKTKRIRDIACGSSHSAALTSSGELY 3132
Query: 306 AWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGH--SHTLVYMRD 363
WG + G+LG G T L P + + +L+ +Q VACG + TL +
Sbjct: 3133 TWGLGEYGRLGHGDNTTQ--LKP-------KMVKVLLGHRVIQ-VACGSRDAQTLALTDE 3182
Query: 364 GRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVL 411
G + WG +G+ S P ++ G+ V ++ G S L
Sbjct: 3183 GLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLAL 3231
Score = 271 (100.5 bits), Expect = 2.8e-17, Sum P(3) = 2.8e-17
Identities = 79/255 (30%), Positives = 130/255 (50%)
Query: 70 GHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSE----FVKSISCGAHC 125
GH H A+A+ G +++WG + G+LG G + P+ + + V I+CG+
Sbjct: 505 GH-HYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTY 563
Query: 126 TAAIAEPRE--NDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGS--VHVVA 181
+AAI E G + RL G ++ P L G + V+CGS +A
Sbjct: 564 SAAITAEGELYTWGRGNYGRLG-HGSSEDEAIPMLVAGL--KGLKVIDVACGSGDAQTLA 620
Query: 182 LSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSA 241
++E G + +WG +YG+LGRG + +G + P++I+ K D L+ + +V CG S
Sbjct: 621 VTENGQVWSWGDGDYGKLGRGGS-DGCKTPKLIE---KLQD----LD-VVKVRCGSQFSV 671
Query: 242 AVSENGEVYTWGLGSVGQLGHCSLQSGDKELL--PRRVVALDGIFIKDVACGGVHSCALT 299
A++++G+VY+WG G +LGH G +E + P+ + L G + DVA G H ALT
Sbjct: 672 ALTKDGQVYSWGKGDNQRLGH-----GTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALT 726
Query: 300 SKGALYAWGGSQAGQ 314
+++WG + Q
Sbjct: 727 EDSEVHSWGSNDQCQ 741
Score = 270 (100.1 bits), Expect = 3.8e-17, Sum P(3) = 3.8e-17
Identities = 88/293 (30%), Positives = 138/293 (47%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
+ A +Y WG G+ G G L PK + G AG + + IACG ++AA
Sbjct: 511 LAATGEVYSWGCGDGGRLGH-GDTVPLEEPKVISA-FSGKQAGKHV--VHIACGSTYSAA 566
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND 136
+ ++G L+TWG +G+LG G+ E P V L+ V ++CG+ +A EN
Sbjct: 567 ITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVT-EN- 624
Query: 137 GTISTSRLWVWGQNQGSNFPRLFW-GAFTPNTI-------ICQVSCGSVHVVALSECGLL 188
++W WG R G TP I + +V CGS VAL++ G +
Sbjct: 625 -----GQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSVALTKDGQV 679
Query: 189 QAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGE 248
+WG + +LG G T E ++ P++++G + +K+ V+ G H A++E+ E
Sbjct: 680 YSWGKGDNQRLGHG-TEEHVRYPKLLEGL--------QGKKVIDVAAGSTHCLALTEDSE 730
Query: 249 VYTWGLGSVGQLGHC-SLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTS 300
V++WG S Q H +L+ E P + LD I +ACG S A +S
Sbjct: 731 VHSWG--SNDQCQHFDTLRVTKPE--PSALPGLDTKHIVGIACGPAQSFAWSS 779
Score = 265 (98.3 bits), Expect = 1.4e-16, Sum P(3) = 1.4e-16
Identities = 87/307 (28%), Positives = 142/307 (46%)
Query: 20 KSAIYVWGYNHSGQTGR-KGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVA 78
++ ++VWG N Q G KG + +++P F A + + +A G + AV
Sbjct: 2969 RTKVFVWGLNDKDQLGGLKGSK--IKVPS------FSETLSALNV-VQVAGGSKSLFAVT 3019
Query: 79 SDGTLFTWGANEFGQLGDGTEEGRKH-PEKVKQLQSEFVKSI---SCGAHCTAAIAEPRE 134
+G ++ G G+LG G G P ++ L S VK + S G H TA + +
Sbjct: 3020 VEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKV 3079
Query: 135 ND-GTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGY 193
G +L + + + PRL T I ++CGS H AL+ G L WG
Sbjct: 3080 FSWGEGDDGKLGHFSR-MNCDKPRLIEALKTKR--IRDIACGSSHSAALTSSGELYTWGL 3136
Query: 194 NEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCG--EYHSAAVSENGEVYT 251
EYG+LG G L+ P+++K L ++ QV+CG + + A+++ G V++
Sbjct: 3137 GEYGRLGHGDNTTQLK-PKMVK---VLLGH-----RVIQVACGSRDAQTLALTDEGLVFS 3187
Query: 252 WGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQ 311
WG G G+LG + + +P+ + L+G + + CG S ALT G ++ WG
Sbjct: 3188 WGDGDFGKLGRGGSEGCN---IPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGD 3244
Query: 312 AGQLGLG 318
+LG G
Sbjct: 3245 YFRLGHG 3251
Score = 227 (85.0 bits), Expect = 5.1e-12, Sum P(3) = 5.1e-12
Identities = 78/247 (31%), Positives = 112/247 (45%)
Query: 171 QVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKI 230
Q+ G + A++ G L A GY G+LG G T E + P +++ ++K+
Sbjct: 4002 QLIGGEQTLFAVTADGKLYATGYGAGGRLGVGGT-ESVSTPTLLESIQHVF-----IKKV 4055
Query: 231 TQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVAC 290
V+ G H A+S GEVY+WG G+LGH + D+ PR + +L G + DVA
Sbjct: 4056 A-VNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDR---PRVIESLRGTEVVDVAA 4111
Query: 291 GGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVP-NGVQL 349
GG HS +T+ G LY WG + G+LG SD+ + P LV G ++
Sbjct: 4112 GGAHSACVTAAGDLYTWGKGRYGRLG-------------HSDSEDQLKPKLVEALQGHRV 4158
Query: 350 V--ACGH--SHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAG 404
V ACG + TL D + WG YG+ S P +D G V K+ G
Sbjct: 4159 VDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECG 4218
Query: 405 GGHSAVL 411
S L
Sbjct: 4219 SQFSVAL 4225
Score = 205 (77.2 bits), Expect = 8.7e-10, Sum P(3) = 8.7e-10
Identities = 77/271 (28%), Positives = 116/271 (42%)
Query: 56 CPAGANSRWLDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEF 115
C AN IAC + ++ +G ++T N L +G VK
Sbjct: 446 CEGLANLGVTQIACAEKRFLILSRNGRVYTQAYNS-DTLAPQLVQGLASRNIVK------ 498
Query: 116 VKSISCGAHCTAAIAEPREND-GTISTSRLWVWGQNQGSNFPRLFWGAFTPNTI---ICQ 171
+ + S G H A A G RL G P++ AF+ +
Sbjct: 499 IAAHSDGHHYLALAATGEVYSWGCGDGGRLG-HGDTVPLEEPKVI-SAFSGKQAGKHVVH 556
Query: 172 VSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKIT 231
++CGS + A++ G L WG YG+LG G + E P ++ G K L K+
Sbjct: 557 IACGSTYSAAITAEGELYTWGRGNYGRLGHG-SSEDEAIPMLVAGL-KGL-------KVI 607
Query: 232 QVSCG--EYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVA 289
V+CG + + AV+ENG+V++WG G G+LG G K P+ + L + + V
Sbjct: 608 DVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGG-SDGCKT--PKLIEKLQDLDVVKVR 664
Query: 290 CGGVHSCALTSKGALYAWGGSQAGQLGLGPQ 320
CG S ALT G +Y+WG +LG G +
Sbjct: 665 CGSQFSVALTKDGQVYSWGKGDNQRLGHGTE 695
Score = 194 (73.4 bits), Expect = 3.9e-09, Sum P(2) = 3.9e-09
Identities = 74/258 (28%), Positives = 115/258 (44%)
Query: 166 NTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAP 225
N + Q++C + LS G + YN + L P++++G A +
Sbjct: 451 NLGVTQIACAEKRFLILSRNGRVYTQAYNS----------DTL-APQLVQGLA-----SR 494
Query: 226 ELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELL--PRRVVALDGI 283
+ KI S G +H A++ GEVY+WG G G+LGH GD L P+ + A G
Sbjct: 495 NIVKIAAHSDG-HHYLALAATGEVYSWGCGDGGRLGH-----GDTVPLEEPKVISAFSGK 548
Query: 284 ----FIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIP 339
+ +ACG +S A+T++G LY WG G+LG G +E + IP
Sbjct: 549 QAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGS---------SEDEA----IP 595
Query: 340 ILVVP-NGVQL--VACGH--SHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWC 394
+LV G+++ VACG + TL +G++ WG YG+ S P ++
Sbjct: 596 MLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKL 655
Query: 395 VG-EVRKLAAGGGHSAVL 411
+V K+ G S L
Sbjct: 656 QDLDVVKVRCGSQFSVAL 673
Score = 194 (73.4 bits), Expect = 2.2e-08, Sum P(3) = 2.2e-08
Identities = 52/185 (28%), Positives = 89/185 (48%)
Query: 229 KITQVSCG--EYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIK 286
++ QV+CG + + A+++ G V++WG G G+LG + + +P+ + L+G +
Sbjct: 3163 RVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCN---IPQNIERLNGQGVC 3219
Query: 287 DVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNG 346
+ CG S ALT G ++ WG +LG G SD + R ++ G
Sbjct: 3220 QIECGAQFSLALTKSGVVWTWGKGDYFRLGHG------------SDVHVRKPQVVEGLRG 3267
Query: 347 VQLV--ACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAA 403
++V A G H L G+++ WG N +GQ N +T P+ V G+ + ++A
Sbjct: 3268 KKIVHVAVGALHCLAVTDAGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVAC 3327
Query: 404 GGGHS 408
G HS
Sbjct: 3328 GSSHS 3332
Score = 175 (66.7 bits), Expect = 1.5e-06, Sum P(3) = 1.5e-06
Identities = 70/247 (28%), Positives = 102/247 (41%)
Query: 140 STSRLWVWGQNQGSNFPRLFWGAFTP---NTIICQVSCGSV--HVVALSECGLLQAWGYN 194
+T ++ WG G RL G P +I S HVV ++ CG +
Sbjct: 513 ATGEVYSWGCGDGG---RLGHGDTVPLEEPKVISAFSGKQAGKHVVHIA-CGSTYSAAIT 568
Query: 195 EYGQL---GRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCG--EYHSAAVSENGEV 249
G+L GRG G + + L K+ V+CG + + AV+ENG+V
Sbjct: 569 AEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGL-KVIDVACGSGDAQTLAVTENGQV 627
Query: 250 YTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGG 309
++WG G G+LG G K P+ + L + + V CG S ALT G +Y+WG
Sbjct: 628 WSWGDGDYGKLGRGG-SDGCKT--PKLIEKLQDLDVVKVRCGSQFSVALTKDGQVYSWGK 684
Query: 310 SQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGW 369
+LG G + E Y + + L + VA G +H L D +H W
Sbjct: 685 GDNQRLGHGTE---------EHVRYPKLLEGLQGKKVID-VAAGSTHCLALTEDSEVHSW 734
Query: 370 GYNSYGQ 376
G N Q
Sbjct: 735 GSNDQCQ 741
Score = 172 (65.6 bits), Expect = 5.0e-06, Sum P(3) = 5.0e-06
Identities = 46/131 (35%), Positives = 64/131 (48%)
Query: 230 ITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVA 289
+ +V CG S A++++G VYTWG G +LGH S D PR+V L G + +A
Sbjct: 4212 VVKVECGSQFSVALTKSGAVYTWGKGDYHRLGH---GSDDHVRRPRQVQGLQGKKVIAIA 4268
Query: 290 CGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQL 349
G +H + G +Y WG + GQLG G T + P R + L V
Sbjct: 4269 TGSLHCVCCSEDGEVYTWGDNDEGQLGDGT-TNAIQR-P-------RLVAALQGKK-VNR 4318
Query: 350 VACGHSHTLVY 360
VACG +HTL +
Sbjct: 4319 VACGSAHTLAW 4329
Score = 165 (63.1 bits), Expect = 3.8e-05, Sum P(4) = 3.8e-05
Identities = 45/131 (34%), Positives = 64/131 (48%)
Query: 230 ITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVA 289
+ Q+ CG S A++++G V+TWG G +LGH S K P+ V L G I VA
Sbjct: 3218 VCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRK---PQVVEGLRGKKIVHVA 3274
Query: 290 CGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQL 349
G +H A+T G +YAWG + GQ G G T N T + + +
Sbjct: 3275 VGALHCLAVTDAGQVYAWGDNDHGQQGNGTTT------VNRKPTLVQGLE----GQKITR 3324
Query: 350 VACGHSHTLVY 360
VACG SH++ +
Sbjct: 3325 VACGSSHSVAW 3335
Score = 43 (20.2 bits), Expect = 5.5e-22, Sum P(3) = 5.5e-22
Identities = 5/12 (41%), Positives = 10/12 (83%)
Query: 360 YMRDGRIHGWGY 371
++ DG ++GWG+
Sbjct: 3704 FISDGSVNGWGW 3715
Score = 41 (19.5 bits), Expect = 3.5e-17, Sum P(3) = 3.5e-17
Identities = 8/18 (44%), Positives = 12/18 (66%)
Query: 115 FVKSISCGAHCTAAIAEP 132
FV+SI+ H AA++ P
Sbjct: 2035 FVRSIALTPHMCAALSSP 2052
Score = 37 (18.1 bits), Expect = 5.5e-22, Sum P(3) = 5.5e-22
Identities = 6/12 (50%), Positives = 9/12 (75%)
Query: 404 GGGHSAVLADAC 415
GGG+S +A+ C
Sbjct: 4492 GGGYSESIAEIC 4503
Score = 37 (18.1 bits), Expect = 5.5e-22, Sum P(3) = 5.5e-22
Identities = 6/12 (50%), Positives = 10/12 (83%)
Query: 446 SEALARLCERLR 457
SE++A +CE L+
Sbjct: 4496 SESIAEICEELQ 4507
>WB|WBGene00017195 [details] [associations]
symbol:glo-4 species:6239 "Caenorhabditis elegans"
[GO:0019915 "lipid storage" evidence=IMP] [GO:0045202 "synapse"
evidence=IDA] [GO:0030424 "axon" evidence=IDA] INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0030424 GO:GO:0045202 GO:GO:0019915
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0005085
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
eggNOG:COG5184 GeneTree:ENSGT00700000104208 EMBL:FO081074
PIR:T28816 PIR:T28817 RefSeq:NP_505392.2 ProteinModelPortal:Q5DX34
SMR:Q5DX34 STRING:Q5DX34 PaxDb:Q5DX34 EnsemblMetazoa:F07C3.4
GeneID:179306 KEGG:cel:CELE_F07C3.4 UCSC:F07C3.4 CTD:179306
WormBase:F07C3.4 HOGENOM:HOG000021586 InParanoid:Q5DX34 OMA:MANHEDV
NextBio:904820 Uniprot:Q5DX34
Length = 1392
Score = 246 (91.7 bits), Expect = 2.0e-16, Sum P(2) = 2.0e-16
Identities = 62/203 (30%), Positives = 102/203 (50%)
Query: 172 VSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKIT 231
++CG+ H++ LS G L AWG N +GQ G G + + + G + P +EKI
Sbjct: 781 IACGAEHILVLSSSGQLSAWGGNRFGQCGVGHSFR-IANLHQVDG------DWPAIEKI- 832
Query: 232 QVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIK--DVA 289
+CG++HSA + +G ++T+G G GQLGH ++ +L+P RV +G+ K +A
Sbjct: 833 --ACGQFHSAFICSDGSLWTFGWGVWGQLGHGG-RNNSNQLVPTRV---NGLICKVTQIA 886
Query: 290 CGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQL 349
CG H+ LT G + G GQ+G + ++ F P+ + P V+
Sbjct: 887 CGRAHTVVLTDTGRVLVCGSGSYGQMG----------VDDDIKKVFAFTPLPLGPLRVRD 936
Query: 350 VACGHSHTLVYMRDGRIHGWGYN 372
+A + H++ D R+ WG N
Sbjct: 937 IATHYYHSICITEDNRVFEWGRN 959
Score = 193 (73.0 bits), Expect = 5.9e-22, Sum P(2) = 5.9e-22
Identities = 64/216 (29%), Positives = 98/216 (45%)
Query: 46 PKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHP 105
P+Q P + P G R IACG EH ++S G L WG N FGQ G G
Sbjct: 763 PEQHLPRVLEYPGG---RPRAIACGAEHILVLSSSGQLSAWGGNRFGQCGVGHSF---RI 816
Query: 106 EKVKQLQSEF--VKSISCGAHCTAAIAEPRENDGTISTSRLWVWGQ-NQG--SNFPRLFW 160
+ Q+ ++ ++ I+CG +A I +DG++ T VWGQ G +N +L
Sbjct: 817 ANLHQVDGDWPAIEKIACGQFHSAFIC----SDGSLWTFGWGVWGQLGHGGRNNSNQLV- 871
Query: 161 GAFTPNTIIC---QVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGY 217
N +IC Q++CG H V L++ G + G YGQ+G + + IK
Sbjct: 872 -PTRVNGLICKVTQIACGRAHTVVLTDTGRVLVCGSGSYGQMG--VDDD-------IKKV 921
Query: 218 AKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWG 253
F ++ ++ YHS ++E+ V+ WG
Sbjct: 922 FAFTPLPLGPLRVRDIATHYYHSICITEDNRVFEWG 957
Score = 173 (66.0 bits), Expect = 2.4e-08, Sum P(2) = 2.4e-08
Identities = 54/184 (29%), Positives = 86/184 (46%)
Query: 233 VSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGG 292
++CG H +S +G++ WG G+ + G C + + + V D I+ +ACG
Sbjct: 781 IACGAEHILVLSSSGQLSAWG-GN--RFGQCGVGHSFR-IANLHQVDGDWPAIEKIACGQ 836
Query: 293 VHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVAC 352
HS + S G+L+ +G GQLG G + S L+P + L+ V +AC
Sbjct: 837 FHSAFICSDGSLWTFGWGVWGQLGHGGRNNSNQLVPTRVNG-------LICK--VTQIAC 887
Query: 353 GHSHTLVYMRDGRIHGWGYNSYGQAANE---KSTYAWYPSPVDWCVGEVRKLAAGGGHSA 409
G +HT+V GR+ G SYGQ + K +A+ P P+ VR +A HS
Sbjct: 888 GRAHTVVLTDTGRVLVCGSGSYGQMGVDDDIKKVFAFTPLPLGPL--RVRDIATHYYHSI 945
Query: 410 VLAD 413
+ +
Sbjct: 946 CITE 949
Score = 155 (59.6 bits), Expect = 2.1e-06, Sum P(2) = 2.1e-06
Identities = 43/143 (30%), Positives = 70/143 (48%)
Query: 273 LPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESD 332
LPR V+ G + +ACG H L+S G L AWGG++ GQ G+G R +L + D
Sbjct: 767 LPR-VLEYPGGRPRAIACGAEHILVLSSSGQLSAWGGNRFGQCGVGHSFRIANLHQVDGD 825
Query: 333 TYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAAN--EKSTYAWYPSP 390
P ++ +ACG H+ DG + +G+ +GQ + ++ P+
Sbjct: 826 W----------P-AIEKIACGQFHSAFICSDGSLWTFGWGVWGQLGHGGRNNSNQLVPTR 874
Query: 391 VDWCVGEVRKLAAGGGHSAVLAD 413
V+ + +V ++A G H+ VL D
Sbjct: 875 VNGLICKVTQIACGRAHTVVLTD 897
Score = 150 (57.9 bits), Expect = 5.9e-22, Sum P(2) = 5.9e-22
Identities = 32/88 (36%), Positives = 50/88 (56%)
Query: 230 ITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVA 289
I V+CG HSA ++ G +YTWG G QLGH + ++ + P +V +G +V+
Sbjct: 1024 IVSVACGLSHSALITSEGTLYTWGKGLDYQLGH---GNKNERMEPHQVFEPNGAKWVNVS 1080
Query: 290 CGGVHSCALTSKGALYAWGGSQAGQLGL 317
G H+ A T G+++AWG + GQ G+
Sbjct: 1081 LGNNHTIASTDDGSVFAWGKNDFGQCGV 1108
Score = 135 (52.6 bits), Expect = 2.2e-20, Sum P(2) = 2.2e-20
Identities = 35/99 (35%), Positives = 49/99 (49%)
Query: 280 LDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIP 339
LDG + VACG HS +TS+G LY WG QLG G + P++
Sbjct: 1020 LDGNIVS-VACGLSHSALITSEGTLYTWGKGLDYQLGHGNKNERME--PHQ--------- 1067
Query: 340 ILVVPNGVQLV--ACGHSHTLVYMRDGRIHGWGYNSYGQ 376
+ PNG + V + G++HT+ DG + WG N +GQ
Sbjct: 1068 -VFEPNGAKWVNVSLGNNHTIASTDDGSVFAWGKNDFGQ 1105
Score = 133 (51.9 bits), Expect = 6.4e-05, P = 6.4e-05
Identities = 28/94 (29%), Positives = 49/94 (52%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
I ++ +Y WG Q G + ++ P ++F P GA +W++++ G+ HT A
Sbjct: 1037 ITSEGTLYTWGKGLDYQLGHGNKNERME-----PHQVFE-PNGA--KWVNVSLGNNHTIA 1088
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQ 110
DG++F WG N+FGQ G T++ + K+
Sbjct: 1089 STDDGSVFAWGKNDFGQCGVLTKKNGNSADVTKK 1122
Score = 124 (48.7 bits), Expect = 0.00060, P = 0.00060
Identities = 33/111 (29%), Positives = 54/111 (48%)
Query: 43 LRIPKQLPPELFGCPAGAN---SRWLDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTE 99
L +P ++P E G + + +ACG H+A + S+GTL+TWG QLG G +
Sbjct: 1000 LNLPAEIPREDLGLREVKHFLDGNIVSVACGLSHSALITSEGTLYTWGKGLDYQLGHGNK 1059
Query: 100 EGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTSRLWVWGQN 150
R P +V + ++S G + T A + DG++ + WG+N
Sbjct: 1060 NERMEPHQVFEPNGAKWVNVSLGNNHTIASTD----DGSV-----FAWGKN 1101
Score = 118 (46.6 bits), Expect = 6.6e-14, Sum P(2) = 6.6e-14
Identities = 48/185 (25%), Positives = 79/185 (42%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
+ + + WG N GQ G G ++ Q+ + PA IACG H+A
Sbjct: 791 LSSSGQLSAWGGNRFGQCG-VGHSFRIANLHQVDGDW---PAIEK-----IACGQFHSAF 841
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKH--PEKVKQLQSEFVKSISCGAHCTAAIAEPRE 134
+ SDG+L+T+G +GQLG G P +V L + V I+CG T + +
Sbjct: 842 ICSDGSLWTFGWGVWGQLGHGGRNNSNQLVPTRVNGLICK-VTQIACGRAHTVVLTDT-- 898
Query: 135 NDGTISTSRLWVWGQ-NQGSNFPRLFWGAFTPNTI----ICQVSCGSVHVVALSECGLLQ 189
G + +GQ + ++F AFTP + + ++ H + ++E +
Sbjct: 899 --GRVLVCGSGSYGQMGVDDDIKKVF--AFTPLPLGPLRVRDIATHYYHSICITEDNRVF 954
Query: 190 AWGYN 194
WG N
Sbjct: 955 EWGRN 959
Score = 111 (44.1 bits), Expect = 1.0e-09, Sum P(2) = 1.0e-09
Identities = 30/101 (29%), Positives = 46/101 (45%)
Query: 169 ICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELE 228
I V+CG H ++ G L WG QLG G E ++ +V + P
Sbjct: 1024 IVSVACGLSHSALITSEGTLYTWGKGLDYQLGHGNKNERMEPHQVFE---------PNGA 1074
Query: 229 KITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGD 269
K VS G H+ A +++G V+ WG GQ G + ++G+
Sbjct: 1075 KWVNVSLGNNHTIASTDDGSVFAWGKNDFGQCGVLTKKNGN 1115
Score = 40 (19.1 bits), Expect = 2.0e-16, Sum P(2) = 2.0e-16
Identities = 8/24 (33%), Positives = 12/24 (50%)
Query: 64 WLDIACGHEHTAAVASDGTLFTWG 87
+L +A G+ A + D L WG
Sbjct: 702 FLPLAGGNNCGATITEDDRLMIWG 725
>ZFIN|ZDB-GENE-061220-11 [details] [associations]
symbol:sergef "secretion regulating guanine
nucleotide exchange factor" species:7955 "Danio rerio" [GO:0050709
"negative regulation of protein secretion" evidence=IEA]
InterPro:IPR027048 INTERPRO:IPR000408 Pfam:PF00415
ZFIN:ZDB-GENE-061220-11 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012
eggNOG:COG5184 HOGENOM:HOG000154414 HOVERGEN:HBG051746
OrthoDB:EOG4J1183 PANTHER:PTHR22870:SF7 EMBL:BC124691
IPI:IPI00490832 UniGene:Dr.91496 InParanoid:Q08BJ6 Uniprot:Q08BJ6
Length = 423
Score = 274 (101.5 bits), Expect = 1.1e-21, P = 1.1e-21
Identities = 112/412 (27%), Positives = 164/412 (39%)
Query: 21 SAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASD 80
S +Y WG N GQ G+ E Q P+++ L + + G H+A ++
Sbjct: 37 SLLYTWGANSYGQLGQGNAEDQAE-PRRVESGL------QEEQIRAVTGGGGHSALISDS 89
Query: 81 GTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQS----EF--VKSISCGAHCTAAIAEPRE 134
G L G N GQLG G H ++ Q+ F V+ +SCG T +
Sbjct: 90 GELLVCGQNHKGQLGLG------HTLEIMTFQTCPLPGFGRVQQVSCGWDFTIILTGDGL 143
Query: 135 --NDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWG 192
G+ + +L V + S P L P T V+ G H +A + G + WG
Sbjct: 144 VLACGSNAFGQLGVSAEKTHSAEPLLLKSFHEPVT---SVAAGLRHALASTASGCVYQWG 200
Query: 193 YNEYGQLGRGITCEGLQGPRVIKGYAKFLDEA--PELEKIT--QVSCGEYHSAAVSENGE 248
G + + P+ + + + P +T +V G H A ++ NGE
Sbjct: 201 ------TGLSSHAKRMLNPQPVPSHLSSKEPCLVPGFAHVTTQKVIAGSAHCACLTVNGE 254
Query: 249 VYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWG 308
++ WG GQL SL L R + L + DV G H A T G ++ WG
Sbjct: 255 LFLWGSNKHGQLISGSLFLPLPVALDRSM--LQDERVSDVHSGWTHLVAQTESGRVFTWG 312
Query: 309 GSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPN-GVQLVACGHSHTLVYMRDGRIH 367
S GQLG QT + S+ D + P+ V G ++CG H L + GR+
Sbjct: 313 RSNYGQLG---QT-NHSMEKQSCDEHLVRSPVEVKALFGATQISCGSEHNLAVV-GGRVF 367
Query: 368 GWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKL-AAGGGHSAVLADACSLK 418
WG+N +G + P P+ V L G GHS L CSLK
Sbjct: 368 SWGWNEHGMCGDGSLQDITQPQPIPALADAVALLIGCGAGHSMAL---CSLK 416
Score = 159 (61.0 bits), Expect = 1.7e-08, P = 1.7e-08
Identities = 56/181 (30%), Positives = 85/181 (46%)
Query: 182 LSEC-GLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHS 240
LS+C LL WG N YGQLG+G + + RV G L E E+I V+ G HS
Sbjct: 32 LSKCVSLLYTWGANSYGQLGQGNAEDQAEPRRVESG----LQE----EQIRAVTGGGGHS 83
Query: 241 AAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIF-IKDVACGGVHSCALT 299
A +S++GE+ G GQLG E++ + L G ++ V+CG + LT
Sbjct: 84 ALISDSGELLVCGQNHKGQLG----LGHTLEIMTFQTCPLPGFGRVQQVSCGWDFTIILT 139
Query: 300 SKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLV 359
G + A G + GQLG+ + ++ S P ++ P+ V G++ + V
Sbjct: 140 GDGLVLACGSNAFGQLGVSAE-KTHSAEPLLLKSFHE--PVTSVAAGLRHALASTASGCV 196
Query: 360 Y 360
Y
Sbjct: 197 Y 197
Score = 133 (51.9 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 34/117 (29%), Positives = 54/117 (46%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPE-LFGCPAGANSRW--LDIACGHEHTAAVAS 79
++ WG ++ GQ G+ + KQ E L P + + I+CG EH AV
Sbjct: 308 VFTWGRSNYGQLGQTNHSME----KQSCDEHLVRSPVEVKALFGATQISCGSEHNLAVVG 363
Query: 80 DGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND 136
G +F+WG NE G GDG+ + P+ + L I CGA + A+ + ++
Sbjct: 364 -GRVFSWGWNEHGMCGDGSLQDITQPQPIPALADAVALLIGCGAGHSMALCSLKSSE 419
>MGI|MGI:1914388 [details] [associations]
symbol:Herc6 "hect domain and RLD 6" species:10090 "Mus
musculus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISO;IBA] [GO:0005622 "intracellular" evidence=IEA]
[GO:0005634 "nucleus" evidence=IBA] [GO:0005737 "cytoplasm"
evidence=ISO;IBA] [GO:0006464 "cellular protein modification
process" evidence=IEA] [GO:0016567 "protein ubiquitination"
evidence=ISO] [GO:0016874 "ligase activity" evidence=IEA]
[GO:0030332 "cyclin binding" evidence=ISO] [GO:0042787 "protein
ubiquitination involved in ubiquitin-dependent protein catabolic
process" evidence=IBA] [GO:0045087 "innate immune response"
evidence=IEA] Pfam:PF00632 InterPro:IPR000569 PROSITE:PS50237
SMART:SM00119 MGI:MGI:1914388 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005829 GO:GO:0005634 GO:GO:0005737 GO:GO:0045087
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
GO:GO:0042787 SUPFAM:SSF56204 GeneTree:ENSGT00660000095216
CTD:55008 OMA:HIFAGTY EMBL:AC127307 EMBL:AC142212 EMBL:AK017888
EMBL:AK149648 IPI:IPI00850197 RefSeq:NP_080268.1 UniGene:Mm.297393
ProteinModelPortal:F2Z461 SMR:F2Z461 PRIDE:F2Z461
Ensembl:ENSMUST00000031817 GeneID:67138 KEGG:mmu:67138
ChiTaRS:HERC6 NextBio:323692 Bgee:F2Z461 Uniprot:F2Z461
Length = 1003
Score = 283 (104.7 bits), Expect = 1.3e-21, P = 1.3e-21
Identities = 78/259 (30%), Positives = 126/259 (48%)
Query: 65 LDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAH 124
L A G H+ + S+ +++ G N +GQLG ++ + PE ++ L V +SCG
Sbjct: 25 LQAASGEHHSLLLFSNHRVYSCGDNSWGQLGQRRDQSTERPEPIQALNDLHVDLVSCGKE 84
Query: 125 CTAAIAEPREND--GTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVAL 182
+ A+ + G S +L + G+ + +F A II QVSCG H +AL
Sbjct: 85 HSVAVCHKGKVFAWGAGSEGQLGI-GEFKEISFMPTKIKALAGIKII-QVSCGHYHSLAL 142
Query: 183 SECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAA 242
SE G + +WG N GQLG G P+ +K L+ P + QV+ G HS A
Sbjct: 143 SEDGHVFSWGRNSEGQLGLGKNSRSQAIPQKVKS----LEGIP----LAQVAAGGTHSFA 194
Query: 243 VSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKG 302
+S G + WG GQL + ++ P + AL + + ++CG H+ LT +G
Sbjct: 195 LSLTGTSFGWGSNRSGQLALSGNKVKEQIYKPHSIGALKNLSVIYISCGYEHTAVLTEEG 254
Query: 303 ALYAWGGSQAGQLGLGPQT 321
++ +GG+ +GQL P++
Sbjct: 255 QVFTFGGNSSGQLQPSPRS 273
Score = 273 (101.2 bits), Expect = 1.7e-20, P = 1.7e-20
Identities = 86/266 (32%), Positives = 126/266 (47%)
Query: 152 GSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGP 211
GS PR A T + Q + G H + L + + G N +GQLG+ + + P
Sbjct: 8 GSRKPRRL-KAGTSGIELLQAASGEHHSLLLFSNHRVYSCGDNSWGQLGQRRD-QSTERP 65
Query: 212 RVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKE 271
I+ L++ + VSCG+ HS AV G+V+ WG GS GQLG + +
Sbjct: 66 EPIQA----LNDL----HVDLVSCGKEHSVAVCHKGKVFAWGAGSEGQLGIGEFK--EIS 115
Query: 272 LLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNES 331
+P ++ AL GI I V+CG HS AL+ G +++WG + GQLGLG +RS IP +
Sbjct: 116 FMPTKIKALAGIKIIQVSCGHYHSLALSEDGHVFSWGRNSEGQLGLGKNSRS-QAIPQKV 174
Query: 332 DTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAA---NEKSTYAWYP 388
+ IP+ Q VA G +H+ G GWG N GQ A N+ + P
Sbjct: 175 KS-LEGIPL------AQ-VAAGGTHSFALSLTGTSFGWGSNRSGQLALSGNKVKEQIYKP 226
Query: 389 SPVDWCVG-EVRKLAAGGGHSAVLAD 413
+ V ++ G H+AVL +
Sbjct: 227 HSIGALKNLSVIYISCGYEHTAVLTE 252
Score = 265 (98.3 bits), Expect = 1.4e-19, P = 1.4e-19
Identities = 59/180 (32%), Positives = 95/180 (52%)
Query: 229 KITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDV 288
KI QVSCG YHS A+SE+G V++WG S GQLG ++ + +P++V +L+GI + V
Sbjct: 128 KIIQVSCGHYHSLALSEDGHVFSWGRNSEGQLGLG--KNSRSQAIPQKVKSLEGIPLAQV 185
Query: 289 ACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQ 348
A GG HS AL+ G + WG +++GQL L + S +N+ ++ +
Sbjct: 186 AAGGTHSFALSLTGTSFGWGSNRSGQLALSGNKVKEQIYKPHSIGALKNLSVIYI----- 240
Query: 349 LVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHS 408
+CG+ HT V +G++ +G NS GQ + P ++ G V ++ H+
Sbjct: 241 --SCGYEHTAVLTEEGQVFTFGGNSSGQLQPSPRSGQRGPQLIEGIGGRVSQIECASYHT 298
Score = 218 (81.8 bits), Expect = 2.2e-14, P = 2.2e-14
Identities = 68/242 (28%), Positives = 114/242 (47%)
Query: 20 KSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVAS 79
K ++ WG GQ G G +++ +P ++ A A + + ++CGH H+ A++
Sbjct: 92 KGKVFAWGAGSEGQLGI-GEFKEISF---MPTKI---KALAGIKIIQVSCGHYHSLALSE 144
Query: 80 DGTLFTWGANEFGQLGDG-TEEGRKHPEKVKQLQSEFVKSISCGA-HCTA-AIAEPREND 136
DG +F+WG N GQLG G + P+KVK L+ + ++ G H A ++
Sbjct: 145 DGHVFSWGRNSEGQLGLGKNSRSQAIPQKVKSLEGIPLAQVAAGGTHSFALSLTGTSFGW 204
Query: 137 GTISTSRLWVWGQNQGSNF--PRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYN 194
G+ + +L + G P GA N + +SCG H L+E G + +G N
Sbjct: 205 GSNRSGQLALSGNKVKEQIYKPHSI-GALK-NLSVIYISCGYEHTAVLTEEGQVFTFGGN 262
Query: 195 EYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAA-VSENGEVYTWG 253
GQL + G +GP++I+G +++Q+ C YH+ A V G+V + G
Sbjct: 263 SSGQL-QPSPRSGQRGPQLIEGIGG---------RVSQIECASYHTIAYVYTTGQVVSLG 312
Query: 254 LG 255
G
Sbjct: 313 RG 314
>UNIPROTKB|Q8IVU3 [details] [associations]
symbol:HERC6 "Probable E3 ubiquitin-protein ligase HERC6"
species:9606 "Homo sapiens" [GO:0005829 "cytosol" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IBA]
[GO:0042787 "protein ubiquitination involved in ubiquitin-dependent
protein catabolic process" evidence=IBA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] Pfam:PF00632
InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119
UniPathway:UPA00143 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005829
GO:GO:0005634 GO:GO:0005737 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00625
PROSITE:PS00626 PROSITE:PS50012 GO:GO:0042787 SUPFAM:SSF56204
eggNOG:COG5021 HOVERGEN:HBG050878 HSSP:Q9UEP9 EMBL:AF336798
EMBL:AY653201 EMBL:AK000644 EMBL:AK092403 EMBL:AK295832
EMBL:BC035775 EMBL:BC042047 EMBL:AL833664 EMBL:BX647121
IPI:IPI00168048 IPI:IPI00455627 IPI:IPI00554785
RefSeq:NP_001158608.1 RefSeq:NP_060382.3 UniGene:Hs.529317
ProteinModelPortal:Q8IVU3 SMR:Q8IVU3 IntAct:Q8IVU3 STRING:Q8IVU3
PhosphoSite:Q8IVU3 DMDM:74750679 PaxDb:Q8IVU3 PRIDE:Q8IVU3
Ensembl:ENST00000264346 Ensembl:ENST00000273960
Ensembl:ENST00000380265 GeneID:55008 KEGG:hsa:55008 UCSC:uc011cdi.2
UCSC:uc011cdj.2 CTD:55008 GeneCards:GC04P089299 HGNC:HGNC:26072
HPA:HPA035846 MIM:609249 neXtProt:NX_Q8IVU3 PharmGKB:PA134894313
InParanoid:Q8IVU3 OMA:HIFAGTY GenomeRNAi:55008 NextBio:58353
ArrayExpress:Q8IVU3 Bgee:Q8IVU3 Genevestigator:Q8IVU3
Uniprot:Q8IVU3
Length = 1022
Score = 283 (104.7 bits), Expect = 1.3e-21, P = 1.3e-21
Identities = 100/336 (29%), Positives = 156/336 (46%)
Query: 58 AGA-NSRWLDIACGHEHTAAVASDGTLFTWGANEFGQLGD-GTEEGRKHPEKVKQLQSEF 115
AG+ + L A G H+ + ++ + + G N GQLG G + G PE ++ L++
Sbjct: 18 AGSPGAELLQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAQRGEL-PEPIQALETLI 76
Query: 116 VKSISCGA-HCTAAIAEPREND-GTISTSRLWVWGQNQGSNF-PRLFWGAFTPNTI-ICQ 171
V +SCG H A + R G S +L + G+ + +F P+ T N I I Q
Sbjct: 77 VDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGI-GEFKEISFTPKKI---MTLNDIKIIQ 132
Query: 172 VSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKIT 231
VSCG H +ALS+ + +WG N +GQLG G P+ ++ L+ P +
Sbjct: 133 VSCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEFPSQASPQRVRS----LEGIP----LA 184
Query: 232 QVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACG 291
QV+ G HS A+S G + WG S GQL + P V AL + + ++CG
Sbjct: 185 QVAAGGAHSFALSLCGTSFGWGSNSAGQLALSGRNVPVQSNKPLSVGALKNLGVVYISCG 244
Query: 292 GVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILV--VPNGVQL 349
H+ LT G ++ +G +++GQLG P P + P LV + V
Sbjct: 245 DAHTAVLTQDGKVFTFGDNRSGQLGYSPT-------PEKRG------PQLVERIDGLVSQ 291
Query: 350 VACGHSHTLVYMRD-GRIHGWGYNSYGQAANEKSTY 384
+ CG HTL Y+ G++ +G+ G + K T+
Sbjct: 292 IDCGSYHTLAYVHTTGQVVSFGH---GPSDTSKPTH 324
Score = 263 (97.6 bits), Expect = 2.4e-19, P = 2.4e-19
Identities = 64/181 (35%), Positives = 99/181 (54%)
Query: 229 KITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDV 288
KI QVSCG YHS A+S++ +V++WG S GQLG + + P+RV +L+GI + V
Sbjct: 129 KIIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLG--KEFPSQASPQRVRSLEGIPLAQV 186
Query: 289 ACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPN-GV 347
A GG HS AL+ G + WG + AGQL L + +P +S+ + + + + N GV
Sbjct: 187 AAGGAHSFALSLCGTSFGWGSNSAGQLALSGRN-----VPVQSN---KPLSVGALKNLGV 238
Query: 348 QLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGH 407
++CG +HT V +DG++ +G N GQ + P V+ G V ++ G H
Sbjct: 239 VYISCGDAHTAVLTQDGKVFTFGDNRSGQLGYSPTPEKRGPQLVERIDGLVSQIDCGSYH 298
Query: 408 S 408
+
Sbjct: 299 T 299
Score = 245 (91.3 bits), Expect = 2.4e-17, P = 2.4e-17
Identities = 65/186 (34%), Positives = 96/186 (51%)
Query: 229 KITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDV 288
++ Q + GE HS + N V + G S GQLG Q G+ LP + AL+ + + V
Sbjct: 24 ELLQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAQRGE---LPEPIQALETLIVDLV 80
Query: 289 ACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQ 348
+CG HS A+ KG ++AWG GQLG+G + + S P + T +I I +Q
Sbjct: 81 SCGKEHSLAVCHKGRVFAWGAGSEGQLGIG-EFKEISFTPKKIMT-LNDIKI------IQ 132
Query: 349 LVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWY-PSPVDWCVG-EVRKLAAGGG 406
V+CGH H+L +D ++ WG NS+GQ K + P V G + ++AAGG
Sbjct: 133 -VSCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGA 191
Query: 407 HSAVLA 412
HS L+
Sbjct: 192 HSFALS 197
Score = 241 (89.9 bits), Expect = 6.7e-17, P = 6.7e-17
Identities = 81/271 (29%), Positives = 131/271 (48%)
Query: 27 GYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLD-IACGHEHTAAVASDGTLFT 85
G N GQ GR+G +R +LP + + +D ++CG EH+ AV G +F
Sbjct: 48 GDNSRGQLGRRGAQRG-----ELPEPI----QALETLIVDLVSCGKEHSLAVCHKGRVFA 98
Query: 86 WGANEFGQLGDGT-EEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTSRL 144
WGA GQLG G +E P+K+ L + +SCG + + A+++ S++
Sbjct: 99 WGAGSEGQLGIGEFKEISFTPKKIMTLNDIKIIQVSCGHYHSLALSKD---------SQV 149
Query: 145 WVWGQNQ-GS-NFPRLFWGAFTPNTI-------ICQVSCGSVHVVALSECGLLQAWGYNE 195
+ WG+N G + F +P + + QV+ G H ALS CG WG N
Sbjct: 150 FSWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNS 209
Query: 196 YGQL---GRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTW 252
GQL GR + + + P + G K L + +SCG+ H+A ++++G+V+T+
Sbjct: 210 AGQLALSGRNVPVQSNK-PLSV-GALKNLG-------VVYISCGDAHTAVLTQDGKVFTF 260
Query: 253 GLGSVGQLGHCSLQSGDKELLPRRVVALDGI 283
G GQLG+ + +K P+ V +DG+
Sbjct: 261 GDNRSGQLGYSP--TPEKRG-PQLVERIDGL 288
Score = 235 (87.8 bits), Expect = 3.1e-16, P = 3.1e-16
Identities = 71/242 (29%), Positives = 121/242 (50%)
Query: 20 KSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVAS 79
K ++ WG GQ G G +++ P ++ + + + ++CGH H+ A++
Sbjct: 93 KGRVFAWGAGSEGQLGI-GEFKEISFT---PKKIMTLN---DIKIIQVSCGHYHSLALSK 145
Query: 80 DGTLFTWGANEFGQLGDGTE-EGRKHPEKVKQLQSEFVKSISCG-AHCTA-AIAEPREND 136
D +F+WG N GQLG G E + P++V+ L+ + ++ G AH A ++
Sbjct: 146 DSQVFSWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGW 205
Query: 137 GTISTSRLWVWGQNQG--SNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYN 194
G+ S +L + G+N SN P L GA N + +SCG H L++ G + +G N
Sbjct: 206 GSNSAGQLALSGRNVPVQSNKP-LSVGALK-NLGVVYISCGDAHTAVLTQDGKVFTFGDN 263
Query: 195 EYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAA-VSENGEVYTWG 253
GQLG T E +GP++++ +D ++Q+ CG YH+ A V G+V ++G
Sbjct: 264 RSGQLGYSPTPEK-RGPQLVER----IDGL-----VSQIDCGSYHTLAYVHTTGQVVSFG 313
Query: 254 LG 255
G
Sbjct: 314 HG 315
>TAIR|locus:2144291 [details] [associations]
symbol:AT5G11580 "AT5G11580" species:3702 "Arabidopsis
thaliana" [GO:0003682 "chromatin binding" evidence=ISS] [GO:0005886
"plasma membrane" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0008536 "Ran GTPase binding" evidence=ISS]
INTERPRO:IPR000408 Pfam:PF00415 EMBL:CP002688 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 HSSP:P18754 EMBL:AY058861 EMBL:AY079040
IPI:IPI00537184 RefSeq:NP_568250.1 UniGene:At.5137 UniGene:At.75215
ProteinModelPortal:Q93Z10 SMR:Q93Z10 PRIDE:Q93Z10
EnsemblPlants:AT5G11580.1 GeneID:831030 KEGG:ath:AT5G11580
TAIR:At5g11580 InParanoid:Q93Z10 OMA:WTFGLGD PhylomeDB:Q93Z10
ProtClustDB:CLSN2689608 Genevestigator:Q93Z10 Uniprot:Q93Z10
Length = 553
Score = 201 (75.8 bits), Expect = 8.5e-21, Sum P(2) = 8.5e-21
Identities = 73/253 (28%), Positives = 122/253 (48%)
Query: 163 FTPNTIICQVSCGSVHVVALSECG-----------LLQAWGYNEYGQLGRGITCEGLQGP 211
F T++ +V+CG HVVAL G +L +WG N +GQLG G E P
Sbjct: 194 FHGRTVL-KVACGDEHVVALVGPGDIHKDNSYDVSVLYSWGNNHHGQLGLG-DGESRARP 251
Query: 212 RVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEV-------YTWGLGSVGQLGHCS 264
+ ++ + ++ L + ++CG +H+A ++ E +T+G G GQLGH S
Sbjct: 252 QTVETF----NQKSGLT-VYDIACGAHHTALLTYRKETPKGPSICWTFGFGENGQLGHRS 306
Query: 265 LQSGDKELLPRRVVAL-DGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRS 323
+S LP V L + ++ V CG H+ ++S+G +++WG + G LGL P +
Sbjct: 307 NKSSS---LPEPVSDLPEHAYLVSVDCGLFHTSVVSSEGYVWSWG-MERG-LGLCPDV-N 360
Query: 324 FSLIPNESDTYFRNIP--ILVVPNGVQLVACGHSHTLVYMRDG-RIHGWGYNSYGQAANE 380
F+ + D+ R I + VQ V+CG +HT++ + G ++ WG G
Sbjct: 361 FTEVEAGDDSVPRKISGGSSRFRDPVQ-VSCGAAHTVLVVDGGYKLWSWGRGRNGVLGTG 419
Query: 381 KSTYAWYPSPVDW 393
+ + P+ V W
Sbjct: 420 NVSDCYVPTLVFW 432
Score = 177 (67.4 bits), Expect = 2.9e-10, P = 2.9e-10
Identities = 65/213 (30%), Positives = 91/213 (42%)
Query: 15 DNIPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHT 74
DN S +Y WG NH GQ G E + R P+ + E F +G DIACG HT
Sbjct: 221 DNSYDVSVLYSWGNNHHGQLGLGDGESRAR-PQTV--ETFNQKSGLTV--YDIACGAHHT 275
Query: 75 AAVA-------SDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQL-QSEFVKSISCGAHCT 126
A + +T+G E GQLG + + PE V L + ++ S+ CG T
Sbjct: 276 ALLTYRKETPKGPSICWTFGFGENGQLGHRSNKSSSLPEPVSDLPEHAYLVSVDCGLFHT 335
Query: 127 AAIAEPRENDGTISTSRLWVWGQNQGS------NF----------PRLFWGAFTPNTIIC 170
+ ++ ++G + W WG +G NF PR G +
Sbjct: 336 SVVS----SEGYV-----WSWGMERGLGLCPDVNFTEVEAGDDSVPRKISGGSSRFRDPV 386
Query: 171 QVSCGSVHVVALSECGL-LQAWGYNEYGQLGRG 202
QVSCG+ H V + + G L +WG G LG G
Sbjct: 387 QVSCGAAHTVLVVDGGYKLWSWGRGRNGVLGTG 419
Score = 169 (64.5 bits), Expect = 2.2e-09, P = 2.2e-09
Identities = 70/235 (29%), Positives = 102/235 (43%)
Query: 169 ICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAP-EL 227
I ++ G H +AL+ G + +WG +G+LG G + L P +++ F ++A +
Sbjct: 18 IISLAAGEAHTIALTGDGCVYSWGRGMFGRLGTGKESDELV-PVLVE----FPNQAEGDR 72
Query: 228 EKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGD----KELLPR-------- 275
+I V+ G YHS AVS++G V+ WG GQLG S K L R
Sbjct: 73 IRIVGVAAGAYHSLAVSDDGSVWCWGYNIYGQLGFDGENSLAPCLIKNLFERETSSSSLN 132
Query: 276 ---RVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESD 332
R V D + + V G + S A+ + G L+ WG P+ SF+ IP
Sbjct: 133 DSGREVGSD-LKVCTVKAGSMMSLAIDNVGGLWMWGNVPPQDSEPDPRL-SFTSIPIP-- 188
Query: 333 TYFRNIPILVVPNGVQL-VACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAW 386
PIL L VACG H + + G IH NSY + Y+W
Sbjct: 189 -----FPILDFHGRTVLKVACGDEHVVALVGPGDIHK--DNSYDVSV----LYSW 232
Score = 168 (64.2 bits), Expect = 2.8e-09, P = 2.8e-09
Identities = 79/323 (24%), Positives = 130/323 (40%)
Query: 55 GCPAGANSRWLDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEE----GRKHPEKVKQ 110
G G++ + + G + A+ + G L+ WG N Q + P +
Sbjct: 135 GREVGSDLKVCTVKAGSMMSLAIDNVGGLWMWG-NVPPQDSEPDPRLSFTSIPIPFPILD 193
Query: 111 LQSEFVKSISCGAHCTAAIAEPRE--NDGTISTSRLWVWGQNQGSNFPRLFWGAFT--PN 166
V ++CG A+ P + D + S L+ WG N L G P
Sbjct: 194 FHGRTVLKVACGDEHVVALVGPGDIHKDNSYDVSVLYSWGNNHHGQLG-LGDGESRARPQ 252
Query: 167 TI----------ICQVSCGSVHVVALS---EC--GLLQAW--GYNEYGQLG-RGITCEGL 208
T+ + ++CG+ H L+ E G W G+ E GQLG R L
Sbjct: 253 TVETFNQKSGLTVYDIACGAHHTALLTYRKETPKGPSICWTFGFGENGQLGHRSNKSSSL 312
Query: 209 QGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWG----LGSVGQLGHCS 264
P + + PE + V CG +H++ VS G V++WG LG +
Sbjct: 313 PEP---------VSDLPEHAYLVSVDCGLFHTSVVSSEGYVWSWGMERGLGLCPDVNFTE 363
Query: 265 LQSGDKELLPRRVVALDGIFIKD---VACGGVHSCALTSKG-ALYAWGGSQAGQLGLGPQ 320
+++GD + +PR++ F +D V+CG H+ + G L++WG + G LG G
Sbjct: 364 VEAGD-DSVPRKISGGSSRF-RDPVQVSCGAAHTVLVVDGGYKLWSWGRGRNGVLGTGNV 421
Query: 321 TRSF--SLI--PNESDTYFRNIP 339
+ + +L+ PNE +P
Sbjct: 422 SDCYVPTLVFWPNELKPEKEEVP 444
Score = 145 (56.1 bits), Expect = 9.5e-07, P = 9.5e-07
Identities = 61/200 (30%), Positives = 93/200 (46%)
Query: 229 KITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRV-----VALDGI 283
KI ++ GE H+ A++ +G VY+WG G G+LG + + D EL+P V D I
Sbjct: 17 KIISLAAGEAHTIALTGDGCVYSWGRGMFGRLG--TGKESD-ELVPVLVEFPNQAEGDRI 73
Query: 284 FIKDVACGGVHSCALTSKGALYAWGGSQAGQLGL-GPQTRSFSLIPN--ESDTYFRNIPI 340
I VA G HS A++ G+++ WG + GQLG G + + LI N E +T ++
Sbjct: 74 RIVGVAAGAYHSLAVSDDGSVWCWGYNIYGQLGFDGENSLAPCLIKNLFERETSSSSLND 133
Query: 341 LVVPNGVQLVAC----GHSHTLVYMRDGRIHGWGYNSYGQAA--NEKSTYAWYPSP---V 391
G L C G +L G + WG N Q + + + ++ P P +
Sbjct: 134 SGREVGSDLKVCTVKAGSMMSLAIDNVGGLWMWG-NVPPQDSEPDPRLSFTSIPIPFPIL 192
Query: 392 DWCVGEVRKLAAGGGHSAVL 411
D+ V K+A G H L
Sbjct: 193 DFHGRTVLKVACGDEHVVAL 212
Score = 138 (53.6 bits), Expect = 1.0e-13, Sum P(2) = 1.0e-13
Identities = 62/229 (27%), Positives = 94/229 (41%)
Query: 169 ICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELE 228
+C V GS+ +A+ G L WG N Q + PR+ + P L+
Sbjct: 144 VCTVKAGSMMSLAIDNVGGLWMWG-NVPPQ-------DSEPDPRL--SFTSIPIPFPILD 193
Query: 229 ----KITQVSCGEYHSAAVSENGEV-----------YTWGLGSVGQLGHCSLQSGDKELL 273
+ +V+CG+ H A+ G++ Y+WG GQLG L G+
Sbjct: 194 FHGRTVLKVACGDEHVVALVGPGDIHKDNSYDVSVLYSWGNNHHGQLG---LGDGESRAR 250
Query: 274 PRRVVALD---GIFIKDVACGGVHSCALT-----SKGALYAW--GGSQAGQLGLGPQTRS 323
P+ V + G+ + D+ACG H+ LT KG W G + GQLG ++
Sbjct: 251 PQTVETFNQKSGLTVYDIACGAHHTALLTYRKETPKGPSICWTFGFGENGQLG--HRSNK 308
Query: 324 FSLIPNESDTYFRNIPILVVPNGVQLVA--CGHSHTLVYMRDGRIHGWG 370
S +P P+ +P LV+ CG HT V +G + WG
Sbjct: 309 SSSLPE---------PVSDLPEHAYLVSVDCGLFHTSVVSSEGYVWSWG 348
Score = 119 (46.9 bits), Expect = 8.5e-21, Sum P(2) = 8.5e-21
Identities = 27/91 (29%), Positives = 48/91 (52%)
Query: 65 LDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVK---QLQSEFVK--SI 119
+ +A G HT A+ DG +++WG FG+LG G E P V+ Q + + ++ +
Sbjct: 19 ISLAAGEAHTIALTGDGCVYSWGRGMFGRLGTGKESDELVPVLVEFPNQAEGDRIRIVGV 78
Query: 120 SCGAHCTAAIAEPRENDGTISTSRLWVWGQN 150
+ GA+ + A+++ DG++ W WG N
Sbjct: 79 AAGAYHSLAVSD----DGSV-----WCWGYN 100
Score = 111 (44.1 bits), Expect = 5.8e-20, Sum P(2) = 5.8e-20
Identities = 31/90 (34%), Positives = 45/90 (50%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+Y WG G+ G G+E +P + E G R + +A G H+ AV+ DG+
Sbjct: 37 VYSWGRGMFGRLGT-GKESDELVPVLV--EFPNQAEGDRIRIVGVAAGAYHSLAVSDDGS 93
Query: 83 LFTWGANEFGQLG-DGTEEGRKHPEKVKQL 111
++ WG N +GQLG DG E P +K L
Sbjct: 94 VWCWGYNIYGQLGFDG--ENSLAPCLIKNL 121
Score = 72 (30.4 bits), Expect = 8.9e-07, Sum P(2) = 8.9e-07
Identities = 38/140 (27%), Positives = 52/140 (37%)
Query: 288 VACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGV 347
V G + S A+ + G L+ WG P+ SF+ IP PIL
Sbjct: 147 VKAGSMMSLAIDNVGGLWMWGNVPPQDSEPDPRL-SFTSIPIP-------FPILDFHGRT 198
Query: 348 QL-VACGHSHTLVYMRDGRIH-----------GWGYNSYGQAANEKSTYAWYPSPVDWCV 395
L VACG H + + G IH WG N +GQ P V+
Sbjct: 199 VLKVACGDEHVVALVGPGDIHKDNSYDVSVLYSWGNNHHGQLGLGDGESRARPQTVETFN 258
Query: 396 GE----VRKLAAGGGHSAVL 411
+ V +A G H+A+L
Sbjct: 259 QKSGLTVYDIACGAHHTALL 278
>ZFIN|ZDB-GENE-040426-2216 [details] [associations]
symbol:rcc1 "regulator of chromosome condensation
1" species:7955 "Danio rerio" [GO:0008150 "biological_process"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
INTERPRO:IPR000408 Pfam:PF00415 ZFIN:ZDB-GENE-040426-2216
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
eggNOG:COG5184 GeneTree:ENSGT00700000104160 KO:K11493 CTD:1104
HOGENOM:HOG000234341 HOVERGEN:HBG017712 OrthoDB:EOG4320Z9
HSSP:P18754 OMA:GTESCFV EMBL:CR855299 EMBL:BC059796 EMBL:BC066721
IPI:IPI00511389 RefSeq:NP_998343.1 UniGene:Dr.77012 SMR:Q6NY65
STRING:Q6NY65 Ensembl:ENSDART00000054026 GeneID:406457
KEGG:dre:406457 InParanoid:Q6NY65 NextBio:20818049 Uniprot:Q6NY65
Length = 418
Score = 264 (98.0 bits), Expect = 1.7e-20, P = 1.7e-20
Identities = 118/418 (28%), Positives = 186/418 (44%)
Query: 20 KSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVAS 79
K + V G GQ G G + + ++ P L P G + G HT ++
Sbjct: 34 KGLVLVLGQGDVGQLGL-GED----VMERKKPALVTLPEGI----VQAVAGGMHTVCLSD 84
Query: 80 DGTLFTWGANEFGQLG-DGTEEGRKH-PEKVKQLQSEFVKSISCGAHCTAAIAEPRENDG 137
G ++T+G N+ G LG D +EEG + P KV L + ++ +S G +AA+ E DG
Sbjct: 85 TGNVYTFGCNDEGALGRDTSEEGSETVPAKV-DLGEKIIQ-VSAGDSHSAALTE----DG 138
Query: 138 TISTSRLWVWGQNQGSN--------FPRLFWGAFTP-NTIICQVSCGSVHVVALSECGLL 188
+ +VWG + +N + P + + ++ G+ H+V L+ G L
Sbjct: 139 GV-----YVWGSFRDNNGVIGLLEPMKKCTVPVKVPIDKPVVKIVSGNDHLVMLTAHGEL 193
Query: 189 QAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEK------ITQVSCGEYHSAA 242
G E GQLGR +G R KG + L+ + K T V CG Y + A
Sbjct: 194 YTSGCGEQGQLGRVAEHFANRGGR--KGLMRLLEPQMVIIKPRGKVVFTDVFCGAYFTFA 251
Query: 243 VSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVA-CGGVH-SCALTS 300
VS+ G VY +GL + QLG QS + +P ++ + V GG H + L S
Sbjct: 252 VSKEGHVYGFGLSNYHQLG---TQSTNTCFVPVKLSSFKNSTTSWVGFSGGQHHTLCLNS 308
Query: 301 KGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVP--NGVQLVACGHSHTL 358
+G Y+ G ++ G+LGLG + +S+ P VVP + VQ+VACG S +
Sbjct: 309 EGKAYSLGRAEYGRLGLGKD------VGEKSE------PT-VVPGISDVQVVACGASVSY 355
Query: 359 VYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-----VRKLAAGGGHSAVL 411
+ G + WG + Q + W SPV+ + V +++GG H+ +L
Sbjct: 356 AVTKQGSVFSWGMGTNLQLGTGEEEDEW--SPVEMTGKQLENRVVLSVSSGGQHTVLL 411
Score = 177 (67.4 bits), Expect = 1.6e-10, P = 1.6e-10
Identities = 87/347 (25%), Positives = 144/347 (41%)
Query: 73 HTAAVASDGTLFTWGANEFGQLGDGTEE-GRKHPEKVKQLQSEFVKSISCGAHCTAAIAE 131
H + G + G + GQLG G + RK P V L V++++ G H T +++
Sbjct: 27 HISHGQEKGLVLVLGQGDVGQLGLGEDVMERKKPALVT-LPEGIVQAVAGGMH-TVCLSD 84
Query: 132 PRENDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAW 191
N T + G++ I QVS G H AL+E G + W
Sbjct: 85 TG-NVYTFGCNDEGALGRDTSEEGSETVPAKVDLGEKIIQVSAGDSHSAALTEDGGVYVW 143
Query: 192 GYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYT 251
G + G+ GL P +K + + P + + ++ G H ++ +GE+YT
Sbjct: 144 G--SFRD-NNGVI--GLLEP--MKKCTVPV-KVPIDKPVVKIVSGNDHLVMLTAHGELYT 195
Query: 252 WGLGSVGQLG----HCSLQSGDKELL----PRRVVALD-G-IFIKDVACGGVHSCALTSK 301
G G GQLG H + + G K L+ P+ V+ G + DV CG + A++ +
Sbjct: 196 SGCGEQGQLGRVAEHFANRGGRKGLMRLLEPQMVIIKPRGKVVFTDVFCGAYFTFAVSKE 255
Query: 302 GALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYM 361
G +Y +G S QLG Q+ + +P + ++ + V +G G HTL
Sbjct: 256 GHVYGFGLSNYHQLGT--QSTNTCFVPVKLSSFKNSTTSWVGFSG------GQHHTLCLN 307
Query: 362 RDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHS 408
+G+ + G YG+ K V + +V+ +A G S
Sbjct: 308 SEGKAYSLGRAEYGRLGLGKDVGEKSEPTVVPGISDVQVVACGASVS 354
>UNIPROTKB|Q9UII4 [details] [associations]
symbol:HERC5 "E3 ISG15--protein ligase HERC5" species:9606
"Homo sapiens" [GO:0051607 "defense response to virus"
evidence=IEA] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IBA] [GO:0005634 "nucleus" evidence=IBA] [GO:0005737
"cytoplasm" evidence=IBA] [GO:0042787 "protein ubiquitination
involved in ubiquitin-dependent protein catabolic process"
evidence=IBA] [GO:0032020 "ISG15-protein conjugation" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0042296 "ISG15
ligase activity" evidence=IDA] [GO:0050688 "regulation of defense
response to virus" evidence=IDA] [GO:0000079 "regulation of
cyclin-dependent protein serine/threonine kinase activity"
evidence=TAS] [GO:0005829 "cytosol" evidence=TAS] [GO:0019221
"cytokine-mediated signaling pathway" evidence=TAS] [GO:0032480
"negative regulation of type I interferon production" evidence=TAS]
[GO:0045087 "innate immune response" evidence=TAS] Pfam:PF00632
InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119 EMBL:AY337518
EMBL:AB027289 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005829
GO:GO:0005634 GO:GO:0048471 Reactome:REACT_6900 GO:GO:0000079
GO:GO:0045087 GO:GO:0019221 GO:GO:0051607 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 GO:GO:0042787
GO:GO:0032480 GO:GO:0050688 SUPFAM:SSF56204 eggNOG:COG5021
HOGENOM:HOG000208452 HOVERGEN:HBG050878 EMBL:AC083829 EMBL:BC140716
IPI:IPI00008821 RefSeq:NP_057407.2 UniGene:Hs.26663
ProteinModelPortal:Q9UII4 SMR:Q9UII4 DIP:DIP-44200N IntAct:Q9UII4
STRING:Q9UII4 PhosphoSite:Q9UII4 DMDM:296434523 PaxDb:Q9UII4
PRIDE:Q9UII4 Ensembl:ENST00000264350 GeneID:51191 KEGG:hsa:51191
UCSC:uc003hrt.3 CTD:51191 GeneCards:GC04P089378 H-InvDB:HIX0200636
HGNC:HGNC:24368 HPA:HPA043929 MIM:608242 neXtProt:NX_Q9UII4
PharmGKB:PA134973940 InParanoid:Q9UII4 OMA:KDWITNT
OrthoDB:EOG4N30N6 PhylomeDB:Q9UII4 GenomeRNAi:51191 NextBio:54182
ArrayExpress:Q9UII4 Bgee:Q9UII4 CleanEx:HS_HERC5
Genevestigator:Q9UII4 GermOnline:ENSG00000138646 GO:GO:0042296
GO:GO:0032020 Uniprot:Q9UII4
Length = 1024
Score = 273 (101.2 bits), Expect = 1.8e-20, P = 1.8e-20
Identities = 84/236 (35%), Positives = 121/236 (51%)
Query: 103 KHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTSRLWVWGQN-QGS-NFPRLFW 160
KH LQ + + I+CG + + A+++ E L+ WGQN G R F
Sbjct: 127 KHLRFESILQEKKIIQITCGDYHSLALSKGGE---------LFAWGQNLHGQLGVGRKFP 177
Query: 161 GAFTPNTI-------ICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRV 213
TP + + Q+S G H +ALS G + +WG NE GQLG G T E P +
Sbjct: 178 STTTPQIVEHLAGVPLAQISAGEAHSMALSMSGNIYSWGKNECGQLGLGHT-ESKDDPSL 236
Query: 214 IKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELL 273
I+G LD +K+ V+CG HSA ++++G ++T+G G GQLGH S Q+ EL
Sbjct: 237 IEG----LDN----QKVEFVACGGSHSALLTQDGLLFTFGAGKHGQLGHNSTQN---ELR 285
Query: 274 PRRVVALDGIFIKDVACGGVHSCALTSK-GALYAWGGSQAGQLGLGPQTRSFSLIP 328
P V L G + +ACG H+ A S G ++++G + GQLG G TR L+P
Sbjct: 286 PCLVAELVGYRVTQIACGRWHTLAYVSDLGKVFSFGSGKDGQLGNGG-TRD-QLMP 339
Score = 241 (89.9 bits), Expect = 6.7e-17, P = 6.7e-17
Identities = 65/207 (31%), Positives = 102/207 (49%)
Query: 228 EKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKD 287
+KI Q++CG+YHS A+S+ GE++ WG GQLG + P+ V L G+ +
Sbjct: 138 KKIIQITCGDYHSLALSKGGELFAWGQNLHGQLGVG--RKFPSTTTPQIVEHLAGVPLAQ 195
Query: 288 VACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGV 347
++ G HS AL+ G +Y+WG ++ GQLGLG T S + + + V
Sbjct: 196 ISAGEAHSMALSMSGNIYSWGKNECGQLGLG-HTES-----KDDPSLIEGLD----NQKV 245
Query: 348 QLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGG 406
+ VACG SH+ + +DG + +G +GQ + + P V VG V ++A G
Sbjct: 246 EFVACGGSHSALLTQDGLLFTFGAGKHGQLGHNSTQNELRPCLVAELVGYRVTQIACGRW 305
Query: 407 HSAVLADACSLKELCEFRLAESVTLSN 433
H+ LA L ++ F + L N
Sbjct: 306 HT--LAYVSDLGKVFSFGSGKDGQLGN 330
Score = 221 (82.9 bits), Expect = 1.1e-14, P = 1.1e-14
Identities = 63/176 (35%), Positives = 83/176 (47%)
Query: 230 ITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVA 289
+ Q+S GE HS A+S +G +Y+WG GQLG +S D P + LD ++ VA
Sbjct: 193 LAQISAGEAHSMALSMSGNIYSWGKNECGQLGLGHTESKDD---PSLIEGLDNQKVEFVA 249
Query: 290 CGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILV---VPNG 346
CGG HS LT G L+ +G + GQLG N + R P LV V
Sbjct: 250 CGGSHSALLTQDGLLFTFGAGKHGQLG-----------HNSTQNELR--PCLVAELVGYR 296
Query: 347 VQLVACGHSHTLVYMRD-GRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKL 401
V +ACG HTL Y+ D G++ +G GQ N + P PV E KL
Sbjct: 297 VTQIACGRWHTLAYVSDLGKVFSFGSGKDGQLGNGGTRDQLMPLPVKVSSSEELKL 352
Score = 217 (81.4 bits), Expect = 3.0e-14, P = 3.0e-14
Identities = 64/202 (31%), Positives = 103/202 (50%)
Query: 65 LDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTE-EGRKHPEKVKQLQSEFVKSISCG- 122
+ I CG H+ A++ G LF WG N GQLG G + P+ V+ L + IS G
Sbjct: 141 IQITCGDYHSLALSKGGELFAWGQNLHGQLGVGRKFPSTTTPQIVEHLAGVPLAQISAGE 200
Query: 123 AHCTA-AIAEPRENDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVA 181
AH A +++ + G +L + G + + P L G N + V+CG H
Sbjct: 201 AHSMALSMSGNIYSWGKNECGQLGL-GHTESKDDPSLIEGL--DNQKVEFVACGGSHSAL 257
Query: 182 LSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSA 241
L++ GLL +G ++GQLG T L+ P ++ + ++TQ++CG +H+
Sbjct: 258 LTQDGLLFTFGAGKHGQLGHNSTQNELR-PCLVAELVGY--------RVTQIACGRWHTL 308
Query: 242 A-VSENGEVYTWGLGSVGQLGH 262
A VS+ G+V+++G G GQLG+
Sbjct: 309 AYVSDLGKVFSFGSGKDGQLGN 330
Score = 199 (75.1 bits), Expect = 1.3e-11, Sum P(2) = 1.3e-11
Identities = 59/197 (29%), Positives = 94/197 (47%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ WG N GQ G GR+ Q+ L G P I+ G H+ A++ G
Sbjct: 159 LFAWGQNLHGQLG-VGRKFPSTTTPQIVEHLAGVPLA------QISAGEAHSMALSMSGN 211
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
+++WG NE GQLG G E + P ++ L ++ V+ ++CG +A + + DG + T
Sbjct: 212 IYSWGKNECGQLGLGHTESKDDPSLIEGLDNQKVEFVACGGSHSALLTQ----DGLLFTF 267
Query: 143 RLWVWGQ---NQGSNFPRLFWGAFTPNTIICQVSCGSVHVVA-LSECGLLQAWGYNEYGQ 198
GQ N N R A + Q++CG H +A +S+ G + ++G + GQ
Sbjct: 268 GAGKHGQLGHNSTQNELRPCLVAELVGYRVTQIACGRWHTLAYVSDLGKVFSFGSGKDGQ 327
Query: 199 LGRGITCEGLQGPRVIK 215
LG G T + L P +K
Sbjct: 328 LGNGGTRDQLM-PLPVK 343
Score = 41 (19.5 bits), Expect = 1.3e-11, Sum P(2) = 1.3e-11
Identities = 7/18 (38%), Positives = 12/18 (66%)
Query: 217 YAKFLDEAPELEKITQVS 234
+ K LD+ P LE + ++S
Sbjct: 793 FKKLLDQMPSLEDLKELS 810
>WB|WBGene00021685 [details] [associations]
symbol:herc-1 species:6239 "Caenorhabditis elegans"
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0006464 "cellular
protein modification process" evidence=IEA] [GO:0019915 "lipid
storage" evidence=IMP] [GO:0000003 "reproduction" evidence=IMP]
Pfam:PF00632 InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005634 GO:GO:0005737
GO:GO:0000003 GO:GO:0019915 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 GO:GO:0042787 SUPFAM:SSF56204 eggNOG:COG5021
GeneTree:ENSGT00660000095216 HOGENOM:HOG000208452 EMBL:FO081800
HSSP:Q05086 RefSeq:NP_490834.1 ProteinModelPortal:Q9BL11 SMR:Q9BL11
STRING:Q9BL11 PaxDb:Q9BL11 EnsemblMetazoa:Y48G8AL.1.1
EnsemblMetazoa:Y48G8AL.1.2 GeneID:171700 KEGG:cel:CELE_Y48G8AL.1
UCSC:Y48G8AL.1 CTD:171700 WormBase:Y48G8AL.1 InParanoid:Q9BL11
OMA:PRELMEL NextBio:872357 Uniprot:Q9BL11
Length = 1019
Score = 185 (70.2 bits), Expect = 9.6e-11, P = 9.6e-11
Identities = 56/188 (29%), Positives = 86/188 (45%)
Query: 226 ELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFI 285
E+ I QV+ G H A+ E G V+ WG + G+ H P V L G+ I
Sbjct: 143 EINDIVQVASGSNHCIALDEGGRVFVWGEQADGRCIH----------RPEPVEQLSGVPI 192
Query: 286 KDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPN 345
V G H AL++ GA++ WG + +G+LG+ L P S + + L
Sbjct: 193 VRVLAGARHCLALSASGAVFTWGQNNSGELGID------DLRPQTSVQHVHQMDGL---- 242
Query: 346 GVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAA-NEKSTYAWYPSPVDWCVGE-VRKLAA 403
GV ACG +HT++ GR +G ++ GQ +K P+ V +G V ++AA
Sbjct: 243 GVVEAACGDNHTVLLTHCGRTFSFGSDALGQCGFGKKVEKRTNPTAVSDLIGSHVTRIAA 302
Query: 404 GGGHSAVL 411
G H+ +
Sbjct: 303 GACHTIAI 310
Score = 178 (67.7 bits), Expect = 5.5e-10, P = 5.5e-10
Identities = 49/148 (33%), Positives = 71/148 (47%)
Query: 167 TIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPE 226
T + V+CG H V L++ G + + G N GQLGRG EG ++ +
Sbjct: 41 TAVTSVTCGEQHTVFLTKDGKMWSVGSNMDGQLGRGSRTEG--------SFSIYPVSWTS 92
Query: 227 LEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIK 286
KI Q+S G H+ +V+++G V+ WG GQLG S + PRRV ++ I
Sbjct: 93 SAKIIQISAGRSHTVSVTDDGRVFAWGSNEHGQLGMESKFTWQGT--PRRVQEINDIV-- 148
Query: 287 DVACGGVHSCALTSKGALYAWGGSQAGQ 314
VA G H AL G ++ WG G+
Sbjct: 149 QVASGSNHCIALDEGGRVFVWGEQADGR 176
Score = 177 (67.4 bits), Expect = 7.2e-10, P = 7.2e-10
Identities = 52/167 (31%), Positives = 82/167 (49%)
Query: 253 GLGSVGQLGHCSLQSGDKEL-LPRRVVA----LDGIFIKDVACGGVHSCALTSKGALYAW 307
G G G+ G ++ + + +P R++ +DG + V CG H+ LT G +++
Sbjct: 7 GCGHTGE-GQLGVRLSESTIQVPERIIGAPNDMDGTAVTSVTCGEQHTVFLTKDGKMWSV 65
Query: 308 GGSQAGQLGLGPQTR-SFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRI 366
G + GQLG G +T SFS+ P S T I +Q+ A G SHT+ DGR+
Sbjct: 66 GSNMDGQLGRGSRTEGSFSIYP-VSWTSSAKI--------IQISA-GRSHTVSVTDDGRV 115
Query: 367 HGWGYNSYGQAANEKSTYAWYPSP--VDWCVGEVRKLAAGGGHSAVL 411
WG N +GQ E S + W +P V + ++ ++A+G H L
Sbjct: 116 FAWGSNEHGQLGME-SKFTWQGTPRRVQE-INDIVQVASGSNHCIAL 160
Score = 167 (63.8 bits), Expect = 1.8e-20, Sum P(2) = 1.8e-20
Identities = 55/200 (27%), Positives = 90/200 (45%)
Query: 27 GYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWL-DIACGHEHTAAVASDGTLFT 85
G+ GQ G + E +++P+++ G P + + + CG +HT + DG +++
Sbjct: 9 GHTGEGQLGVRLSESTIQVPERI----IGAPNDMDGTAVTSVTCGEQHTVFLTKDGKMWS 64
Query: 86 WGANEFGQLGDGTE-EGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTSRL 144
G+N GQLG G+ EG V S + IS G T ++ + DG R+
Sbjct: 65 VGSNMDGQLGRGSRTEGSFSIYPVSWTSSAKIIQISAGRSHTVSVTD----DG-----RV 115
Query: 145 WVWGQNQGSNF---PRLFWGAFTPNTI-----ICQVSCGSVHVVALSECGLLQAWGYNEY 196
+ WG N+ + W TP + I QV+ GS H +AL E G + WG
Sbjct: 116 FAWGSNEHGQLGMESKFTWQG-TPRRVQEINDIVQVASGSNHCIALDEGGRVFVWGEQAD 174
Query: 197 GQ-LGRGITCEGLQGPRVIK 215
G+ + R E L G +++
Sbjct: 175 GRCIHRPEPVEQLSGVPIVR 194
Score = 165 (63.1 bits), Expect = 8.5e-08, Sum P(2) = 8.5e-08
Identities = 55/181 (30%), Positives = 84/181 (46%)
Query: 25 VW--GYNHSGQTGRKGR-ERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDG 81
+W G N GQ GR R E I + ++++ + I+ G HT +V DG
Sbjct: 62 MWSVGSNMDGQLGRGSRTEGSFSI--------YPVSWTSSAKIIQISAGRSHTVSVTDDG 113
Query: 82 TLFTWGANEFGQLG-DGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIS 140
+F WG+NE GQLG + + P +V+++ ++ V+ S HC A ++G
Sbjct: 114 RVFAWGSNEHGQLGMESKFTWQGTPRRVQEI-NDIVQVASGSNHCIAL------DEG--- 163
Query: 141 TSRLWVWG-QNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQL 199
R++VWG Q G R I +V G+ H +ALS G + WG N G+L
Sbjct: 164 -GRVFVWGEQADGRCIHRPEPVEQLSGVPIVRVLAGARHCLALSASGAVFTWGQNNSGEL 222
Query: 200 G 200
G
Sbjct: 223 G 223
Score = 162 (62.1 bits), Expect = 3.1e-08, P = 3.1e-08
Identities = 55/192 (28%), Positives = 91/192 (47%)
Query: 143 RLWVWG-QNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGR 201
R++VWG Q G R I +V G+ H +ALS G + WG N G+LG
Sbjct: 165 RVFVWGEQADGRCIHRPEPVEQLSGVPIVRVLAGARHCLALSASGAVFTWGQNNSGELG- 223
Query: 202 GITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLG 261
+ L+ P+ + +D + + +CG+ H+ ++ G +++G ++GQ G
Sbjct: 224 ---IDDLR-PQTSVQHVHQMDGLG----VVEAACGDNHTVLLTHCGRTFSFGSDALGQCG 275
Query: 262 HCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGP-Q 320
+ +K P V L G + +A G H+ A+ KGA Y +G + +GQLG G
Sbjct: 276 FG--KKVEKRTNPTAVSDLIGSHVTRIAAGACHTIAIC-KGAPYPFGLNSSGQLGNGKIM 332
Query: 321 TRSFSLIPNESD 332
T+S P ++D
Sbjct: 333 TQS---TPRKTD 341
Score = 160 (61.4 bits), Expect = 1.8e-20, Sum P(2) = 1.8e-20
Identities = 45/152 (29%), Positives = 72/152 (47%)
Query: 230 ITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVA 289
I +V G H A+S +G V+TWG + G+LG L+ + + V +DG+ + + A
Sbjct: 192 IVRVLAGARHCLALSASGAVFTWGQNNSGELGIDDLRP---QTSVQHVHQMDGLGVVEAA 248
Query: 290 CGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQL 349
CG H+ LT G +++G GQ G G + + SD ++ + V
Sbjct: 249 CGDNHTVLLTHCGRTFSFGSDALGQCGFGKKVEKRTNPTAVSD---------LIGSHVTR 299
Query: 350 VACGHSHTLVYMRDGRIHGWGYNSYGQAANEK 381
+A G HT+ + G + +G NS GQ N K
Sbjct: 300 IAAGACHTIAICK-GAPYPFGLNSSGQLGNGK 330
Score = 155 (59.6 bits), Expect = 1.8e-07, P = 1.8e-07
Identities = 38/126 (30%), Positives = 65/126 (51%)
Query: 192 GYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYT 251
G+ GQLG ++ +Q P I G +D +T V+CGE H+ ++++G++++
Sbjct: 9 GHTGEGQLGVRLSESTIQVPERIIGAPNDMDGTA----VTSVTCGEQHTVFLTKDGKMWS 64
Query: 252 WGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQ 311
G GQLG S G + P V I ++ G H+ ++T G ++AWG ++
Sbjct: 65 VGSNMDGQLGRGSRTEGSFSIYP--VSWTSSAKIIQISAGRSHTVSVTDDGRVFAWGSNE 122
Query: 312 AGQLGL 317
GQLG+
Sbjct: 123 HGQLGM 128
Score = 84 (34.6 bits), Expect = 8.6e-12, Sum P(2) = 8.6e-12
Identities = 30/109 (27%), Positives = 47/109 (43%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ WG N GQ G + + P+++ E+ + + +A G H A+ G
Sbjct: 115 VFAWGSNEHGQLGMESKFTWQGTPRRVQ-EI--------NDIVQVASGSNHCIALDEGGR 165
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGA-HCTAAIA 130
+F WG + DG R PE V+QL + + GA HC A A
Sbjct: 166 VFVWG-----EQADGRCIHR--PEPVEQLSGVPIVRVLAGARHCLALSA 207
Score = 40 (19.1 bits), Expect = 5.1e-08, Sum P(2) = 5.1e-08
Identities = 14/48 (29%), Positives = 24/48 (50%)
Query: 195 EYGQLGR--GITCEG---LQGPRVIKGYAKFLDEAPELEKITQVSCGE 237
++ QLGR G++ + P + Y LD P+LE + ++S E
Sbjct: 754 QFHQLGRLVGLSIYNHSIVPFPFPLALYKYLLDTPPDLEDLCELSPSE 801
>UNIPROTKB|Q9BL11 [details] [associations]
symbol:herc-1 "Protein HERC-1" species:6239 "Caenorhabditis
elegans" [GO:0042787 "protein ubiquitination involved in
ubiquitin-dependent protein catabolic process" evidence=IBA]
[GO:0005737 "cytoplasm" evidence=IBA] [GO:0005634 "nucleus"
evidence=IBA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IBA] Pfam:PF00632 InterPro:IPR000569 PROSITE:PS50237
SMART:SM00119 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005634
GO:GO:0005737 GO:GO:0000003 GO:GO:0019915 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 GO:GO:0042787 SUPFAM:SSF56204
eggNOG:COG5021 GeneTree:ENSGT00660000095216 HOGENOM:HOG000208452
EMBL:FO081800 HSSP:Q05086 RefSeq:NP_490834.1
ProteinModelPortal:Q9BL11 SMR:Q9BL11 STRING:Q9BL11 PaxDb:Q9BL11
EnsemblMetazoa:Y48G8AL.1.1 EnsemblMetazoa:Y48G8AL.1.2 GeneID:171700
KEGG:cel:CELE_Y48G8AL.1 UCSC:Y48G8AL.1 CTD:171700
WormBase:Y48G8AL.1 InParanoid:Q9BL11 OMA:PRELMEL NextBio:872357
Uniprot:Q9BL11
Length = 1019
Score = 185 (70.2 bits), Expect = 9.6e-11, P = 9.6e-11
Identities = 56/188 (29%), Positives = 86/188 (45%)
Query: 226 ELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFI 285
E+ I QV+ G H A+ E G V+ WG + G+ H P V L G+ I
Sbjct: 143 EINDIVQVASGSNHCIALDEGGRVFVWGEQADGRCIH----------RPEPVEQLSGVPI 192
Query: 286 KDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPN 345
V G H AL++ GA++ WG + +G+LG+ L P S + + L
Sbjct: 193 VRVLAGARHCLALSASGAVFTWGQNNSGELGID------DLRPQTSVQHVHQMDGL---- 242
Query: 346 GVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAA-NEKSTYAWYPSPVDWCVGE-VRKLAA 403
GV ACG +HT++ GR +G ++ GQ +K P+ V +G V ++AA
Sbjct: 243 GVVEAACGDNHTVLLTHCGRTFSFGSDALGQCGFGKKVEKRTNPTAVSDLIGSHVTRIAA 302
Query: 404 GGGHSAVL 411
G H+ +
Sbjct: 303 GACHTIAI 310
Score = 178 (67.7 bits), Expect = 5.5e-10, P = 5.5e-10
Identities = 49/148 (33%), Positives = 71/148 (47%)
Query: 167 TIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPE 226
T + V+CG H V L++ G + + G N GQLGRG EG ++ +
Sbjct: 41 TAVTSVTCGEQHTVFLTKDGKMWSVGSNMDGQLGRGSRTEG--------SFSIYPVSWTS 92
Query: 227 LEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIK 286
KI Q+S G H+ +V+++G V+ WG GQLG S + PRRV ++ I
Sbjct: 93 SAKIIQISAGRSHTVSVTDDGRVFAWGSNEHGQLGMESKFTWQGT--PRRVQEINDIV-- 148
Query: 287 DVACGGVHSCALTSKGALYAWGGSQAGQ 314
VA G H AL G ++ WG G+
Sbjct: 149 QVASGSNHCIALDEGGRVFVWGEQADGR 176
Score = 177 (67.4 bits), Expect = 7.2e-10, P = 7.2e-10
Identities = 52/167 (31%), Positives = 82/167 (49%)
Query: 253 GLGSVGQLGHCSLQSGDKEL-LPRRVVA----LDGIFIKDVACGGVHSCALTSKGALYAW 307
G G G+ G ++ + + +P R++ +DG + V CG H+ LT G +++
Sbjct: 7 GCGHTGE-GQLGVRLSESTIQVPERIIGAPNDMDGTAVTSVTCGEQHTVFLTKDGKMWSV 65
Query: 308 GGSQAGQLGLGPQTR-SFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRI 366
G + GQLG G +T SFS+ P S T I +Q+ A G SHT+ DGR+
Sbjct: 66 GSNMDGQLGRGSRTEGSFSIYP-VSWTSSAKI--------IQISA-GRSHTVSVTDDGRV 115
Query: 367 HGWGYNSYGQAANEKSTYAWYPSP--VDWCVGEVRKLAAGGGHSAVL 411
WG N +GQ E S + W +P V + ++ ++A+G H L
Sbjct: 116 FAWGSNEHGQLGME-SKFTWQGTPRRVQE-INDIVQVASGSNHCIAL 160
Score = 167 (63.8 bits), Expect = 1.8e-20, Sum P(2) = 1.8e-20
Identities = 55/200 (27%), Positives = 90/200 (45%)
Query: 27 GYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWL-DIACGHEHTAAVASDGTLFT 85
G+ GQ G + E +++P+++ G P + + + CG +HT + DG +++
Sbjct: 9 GHTGEGQLGVRLSESTIQVPERI----IGAPNDMDGTAVTSVTCGEQHTVFLTKDGKMWS 64
Query: 86 WGANEFGQLGDGTE-EGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTSRL 144
G+N GQLG G+ EG V S + IS G T ++ + DG R+
Sbjct: 65 VGSNMDGQLGRGSRTEGSFSIYPVSWTSSAKIIQISAGRSHTVSVTD----DG-----RV 115
Query: 145 WVWGQNQGSNF---PRLFWGAFTPNTI-----ICQVSCGSVHVVALSECGLLQAWGYNEY 196
+ WG N+ + W TP + I QV+ GS H +AL E G + WG
Sbjct: 116 FAWGSNEHGQLGMESKFTWQG-TPRRVQEINDIVQVASGSNHCIALDEGGRVFVWGEQAD 174
Query: 197 GQ-LGRGITCEGLQGPRVIK 215
G+ + R E L G +++
Sbjct: 175 GRCIHRPEPVEQLSGVPIVR 194
Score = 165 (63.1 bits), Expect = 8.5e-08, Sum P(2) = 8.5e-08
Identities = 55/181 (30%), Positives = 84/181 (46%)
Query: 25 VW--GYNHSGQTGRKGR-ERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDG 81
+W G N GQ GR R E I + ++++ + I+ G HT +V DG
Sbjct: 62 MWSVGSNMDGQLGRGSRTEGSFSI--------YPVSWTSSAKIIQISAGRSHTVSVTDDG 113
Query: 82 TLFTWGANEFGQLG-DGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIS 140
+F WG+NE GQLG + + P +V+++ ++ V+ S HC A ++G
Sbjct: 114 RVFAWGSNEHGQLGMESKFTWQGTPRRVQEI-NDIVQVASGSNHCIAL------DEG--- 163
Query: 141 TSRLWVWG-QNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQL 199
R++VWG Q G R I +V G+ H +ALS G + WG N G+L
Sbjct: 164 -GRVFVWGEQADGRCIHRPEPVEQLSGVPIVRVLAGARHCLALSASGAVFTWGQNNSGEL 222
Query: 200 G 200
G
Sbjct: 223 G 223
Score = 162 (62.1 bits), Expect = 3.1e-08, P = 3.1e-08
Identities = 55/192 (28%), Positives = 91/192 (47%)
Query: 143 RLWVWG-QNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGR 201
R++VWG Q G R I +V G+ H +ALS G + WG N G+LG
Sbjct: 165 RVFVWGEQADGRCIHRPEPVEQLSGVPIVRVLAGARHCLALSASGAVFTWGQNNSGELG- 223
Query: 202 GITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLG 261
+ L+ P+ + +D + + +CG+ H+ ++ G +++G ++GQ G
Sbjct: 224 ---IDDLR-PQTSVQHVHQMDGLG----VVEAACGDNHTVLLTHCGRTFSFGSDALGQCG 275
Query: 262 HCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGP-Q 320
+ +K P V L G + +A G H+ A+ KGA Y +G + +GQLG G
Sbjct: 276 FG--KKVEKRTNPTAVSDLIGSHVTRIAAGACHTIAIC-KGAPYPFGLNSSGQLGNGKIM 332
Query: 321 TRSFSLIPNESD 332
T+S P ++D
Sbjct: 333 TQS---TPRKTD 341
Score = 160 (61.4 bits), Expect = 1.8e-20, Sum P(2) = 1.8e-20
Identities = 45/152 (29%), Positives = 72/152 (47%)
Query: 230 ITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVA 289
I +V G H A+S +G V+TWG + G+LG L+ + + V +DG+ + + A
Sbjct: 192 IVRVLAGARHCLALSASGAVFTWGQNNSGELGIDDLRP---QTSVQHVHQMDGLGVVEAA 248
Query: 290 CGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQL 349
CG H+ LT G +++G GQ G G + + SD ++ + V
Sbjct: 249 CGDNHTVLLTHCGRTFSFGSDALGQCGFGKKVEKRTNPTAVSD---------LIGSHVTR 299
Query: 350 VACGHSHTLVYMRDGRIHGWGYNSYGQAANEK 381
+A G HT+ + G + +G NS GQ N K
Sbjct: 300 IAAGACHTIAICK-GAPYPFGLNSSGQLGNGK 330
Score = 155 (59.6 bits), Expect = 1.8e-07, P = 1.8e-07
Identities = 38/126 (30%), Positives = 65/126 (51%)
Query: 192 GYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYT 251
G+ GQLG ++ +Q P I G +D +T V+CGE H+ ++++G++++
Sbjct: 9 GHTGEGQLGVRLSESTIQVPERIIGAPNDMDGTA----VTSVTCGEQHTVFLTKDGKMWS 64
Query: 252 WGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQ 311
G GQLG S G + P V I ++ G H+ ++T G ++AWG ++
Sbjct: 65 VGSNMDGQLGRGSRTEGSFSIYP--VSWTSSAKIIQISAGRSHTVSVTDDGRVFAWGSNE 122
Query: 312 AGQLGL 317
GQLG+
Sbjct: 123 HGQLGM 128
Score = 84 (34.6 bits), Expect = 8.6e-12, Sum P(2) = 8.6e-12
Identities = 30/109 (27%), Positives = 47/109 (43%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ WG N GQ G + + P+++ E+ + + +A G H A+ G
Sbjct: 115 VFAWGSNEHGQLGMESKFTWQGTPRRVQ-EI--------NDIVQVASGSNHCIALDEGGR 165
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGA-HCTAAIA 130
+F WG + DG R PE V+QL + + GA HC A A
Sbjct: 166 VFVWG-----EQADGRCIHR--PEPVEQLSGVPIVRVLAGARHCLALSA 207
Score = 40 (19.1 bits), Expect = 5.1e-08, Sum P(2) = 5.1e-08
Identities = 14/48 (29%), Positives = 24/48 (50%)
Query: 195 EYGQLGR--GITCEG---LQGPRVIKGYAKFLDEAPELEKITQVSCGE 237
++ QLGR G++ + P + Y LD P+LE + ++S E
Sbjct: 754 QFHQLGRLVGLSIYNHSIVPFPFPLALYKYLLDTPPDLEDLCELSPSE 801
>RGD|1309901 [details] [associations]
symbol:Rccd1 "RCC1 domain containing 1" species:10116 "Rattus
norvegicus" [GO:0005737 "cytoplasm" evidence=IEA;ISO] [GO:0005886
"plasma membrane" evidence=IEA;ISO] RGD:1309901 INTERPRO:IPR000408
Pfam:PF00415 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 CTD:91433
OrthoDB:EOG41NTMF GeneTree:ENSGT00700000104312 IPI:IPI00391295
RefSeq:XP_218819.5 UniGene:Rn.225183 Ensembl:ENSRNOT00000029471
GeneID:308760 KEGG:rno:308760 UCSC:RGD:1309901 NextBio:659480
Uniprot:D3ZG92
Length = 378
Score = 200 (75.5 bits), Expect = 3.7e-20, Sum P(2) = 3.7e-20
Identities = 45/100 (45%), Positives = 65/100 (65%)
Query: 224 APELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGI 283
APEL ++ Q+ G H+ + E G+V++WG G GQLGH SL++ EL PR + AL G+
Sbjct: 158 APEL-RVRQLQLGAEHALLLCEAGQVFSWGGGRHGQLGHGSLEA---ELEPRLLEALQGL 213
Query: 284 FIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRS 323
+ +VA GG HS ++ G +Y WG +++GQL L P TRS
Sbjct: 214 RMAEVAAGGWHSVCVSETGDIYIWGWNESGQLAL-P-TRS 251
Score = 159 (61.0 bits), Expect = 2.5e-15, Sum P(2) = 2.5e-15
Identities = 58/227 (25%), Positives = 100/227 (44%)
Query: 74 TAAVASDGTLFTWGAN-----EFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAA 128
+ + A+DG W + + + G GTE P Q + +V++++ GA
Sbjct: 66 SVSCAADGCRDVWASEGLLVVQRNKSGSGTELQAWVPGSALQGEPLWVQNLASGAKAQGE 125
Query: 129 IAEPRENDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLL 188
EP ++ + T L + + P F P + Q+ G+ H + L E G +
Sbjct: 126 -DEPG-SEPRMGTLPLLPCARAYMTPQPP-FCQPLAPELRVRQLQLGAEHALLLCEAGQV 182
Query: 189 QAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGE 248
+WG +GQLG G + E PR++ EA + ++ +V+ G +HS VSE G+
Sbjct: 183 FSWGGGRHGQLGHG-SLEAELEPRLL--------EALQGLRMAEVAAGGWHSVCVSETGD 233
Query: 249 VYTWGLGSVGQLGHCSLQSGDKELLPRRVVAL--DGIFIKDVACGGV 293
+Y WG GQL + +K+ + L DG+ ++ A V
Sbjct: 234 IYIWGWNESGQLALPTRSGTEKKTVREEATELNDDGLRGEEAALADV 280
Score = 137 (53.3 bits), Expect = 3.8e-06, P = 3.8e-06
Identities = 49/178 (27%), Positives = 75/178 (42%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ WG GQ G E +L P L G R ++A G H+ V+ G
Sbjct: 182 VFSWGGGRHGQLGHGSLEAELE------PRLLEALQGL--RMAEVAAGGWHSVCVSETGD 233
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
++ WG NE GQL T G + + V++ +E G AA+A+ +
Sbjct: 234 IYIWGWNESGQLALPTRSGTEK-KTVREEATELNDDGLRGEE--AALAD-------VGAP 283
Query: 143 RLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLG 200
++ Q FP L + + + SCGS H ++ G L WG+ +YGQLG
Sbjct: 284 AHFIAIQP----FPALLDLPLGSDAV--KASCGSRHTAVVTRTGELYTWGWGKYGQLG 335
Score = 129 (50.5 bits), Expect = 2.9e-05, P = 2.9e-05
Identities = 31/88 (35%), Positives = 46/88 (52%)
Query: 51 PELFGCPAGANSRWLDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVK- 109
P L P G+++ + +CG HTA V G L+TWG ++GQLG P +V+
Sbjct: 293 PALLDLPLGSDA--VKASCGSRHTAVVTRTGELYTWGWGKYGQLGHKDSTSSDQPCRVEY 350
Query: 110 --QLQSEFVKSISCGAHCTAAIAEPREN 135
+ Q E V++++CG T A REN
Sbjct: 351 FVERQLE-VRAVTCGPWNTYVYAVEREN 377
Score = 120 (47.3 bits), Expect = 4.3e-11, Sum P(2) = 4.3e-11
Identities = 28/78 (35%), Positives = 38/78 (48%)
Query: 214 IKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELL 273
I+ + LD P + SCG H+A V+ GE+YTWG G GQLGH S D+
Sbjct: 289 IQPFPALLD-LPLGSDAVKASCGSRHTAVVTRTGELYTWGWGKYGQLGHKDSTSSDQPCR 347
Query: 274 PRRVVALDGIFIKDVACG 291
V + ++ V CG
Sbjct: 348 VEYFVERQ-LEVRAVTCG 364
Score = 108 (43.1 bits), Expect = 4.3e-11, Sum P(2) = 4.3e-11
Identities = 27/102 (26%), Positives = 44/102 (43%)
Query: 50 PPELFGCPAGANSRWLDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVK 109
PP F P R + G EH + G +F+WG GQLG G+ E P ++
Sbjct: 151 PP--FCQPLAPELRVRQLQLGAEHALLLCEAGQVFSWGGGRHGQLGHGSLEAELEPRLLE 208
Query: 110 QLQSEFVKSISCGAHCTAAIAEPRENDGTISTSRLWVWGQNQ 151
LQ + ++ G + ++E T +++WG N+
Sbjct: 209 ALQGLRMAEVAAGGWHSVCVSE---------TGDIYIWGWNE 241
Score = 106 (42.4 bits), Expect = 3.7e-20, Sum P(2) = 3.7e-20
Identities = 27/78 (34%), Positives = 41/78 (52%)
Query: 340 ILVVPNGVQLV--ACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG- 396
+L +P G V +CG HT V R G ++ WG+ YGQ ++ ST + P V++ V
Sbjct: 295 LLDLPLGSDAVKASCGSRHTAVVTRTGELYTWGWGKYGQLGHKDSTSSDQPCRVEYFVER 354
Query: 397 --EVRKLAAGGGHSAVLA 412
EVR + G ++ V A
Sbjct: 355 QLEVRAVTCGPWNTYVYA 372
Score = 91 (37.1 bits), Expect = 5.3e-08, Sum P(2) = 5.3e-08
Identities = 24/70 (34%), Positives = 38/70 (54%)
Query: 171 QVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKI 230
+ SCGS H ++ G L WG+ +YGQLG + Q RV Y F++ +LE +
Sbjct: 306 KASCGSRHTAVVTRTGELYTWGWGKYGQLGHKDSTSSDQPCRV--EY--FVER--QLE-V 358
Query: 231 TQVSCGEYHS 240
V+CG +++
Sbjct: 359 RAVTCGPWNT 368
Score = 83 (34.3 bits), Expect = 6.1e-13, Sum P(2) = 6.1e-13
Identities = 25/72 (34%), Positives = 33/72 (45%)
Query: 289 ACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQ 348
+CG H+ +T G LY WG + GQLG T S P + YF + V+
Sbjct: 308 SCGSRHTAVVTRTGELYTWGWGKYGQLGHKDSTSSDQ--PCRVE-YFVERQL-----EVR 359
Query: 349 LVACGHSHTLVY 360
V CG +T VY
Sbjct: 360 AVTCGPWNTYVY 371
>UNIPROTKB|F1N1N9 [details] [associations]
symbol:HERC5 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0050688 "regulation of defense response to virus"
evidence=IEA] [GO:0042296 "ISG15 ligase activity" evidence=IEA]
[GO:0032020 "ISG15-protein conjugation" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] Pfam:PF00632 InterPro:IPR000569
PROSITE:PS50237 SMART:SM00119 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0016567 GO:GO:0005622 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 GO:GO:0050688 SUPFAM:SSF56204
GeneTree:ENSGT00660000095216 OMA:KDWITNT GO:GO:0042296
GO:GO:0032020 EMBL:DAAA02017014 IPI:IPI00907336
Ensembl:ENSBTAT00000052811 Uniprot:F1N1N9
Length = 959
Score = 269 (99.8 bits), Expect = 4.6e-20, P = 4.6e-20
Identities = 80/228 (35%), Positives = 121/228 (53%)
Query: 111 LQSEFVKSISCGAHCTAAIAEPRENDGTISTSRLWVWGQN-QGS-NFPRLFWGAFTPNTI 168
LQ + + I+CG + + A+++ E L+ WGQN G R+F TP +
Sbjct: 145 LQEKNIIQITCGDYHSLALSKGGE---------LFAWGQNLDGQLGVGRIFASTSTPEIV 195
Query: 169 -------ICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFL 221
+ Q+S G H +ALS G + +WG N+ GQLG G T + P I+ L
Sbjct: 196 ENLSGVPLVQISAGEAHSMALSMSGNVYSWGRNDCGQLGLGHTYNK-ESPSCIEA----L 250
Query: 222 DEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALD 281
D+ +K+ ++CG H+A ++++G V+T+G G GQLGH S Q+ EL PR V L
Sbjct: 251 DD----QKVEFLACGGCHTALLTKSGLVFTFGDGKYGQLGHNSTQN---ELRPRLVTGLV 303
Query: 282 GIFIKDVACGGVHSCALTSK-GALYAWGGSQAGQLGLGPQTRSFSLIP 328
G + +ACG H+ A S G ++++G + GQLG G TR+ LIP
Sbjct: 304 GNRVTQIACGRQHTLAYVSDTGKVFSFGSGKEGQLGNGG-TRN-QLIP 349
Score = 233 (87.1 bits), Expect = 4.7e-16, P = 4.7e-16
Identities = 59/188 (31%), Positives = 95/188 (50%)
Query: 228 EKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKD 287
+ I Q++CG+YHS A+S+ GE++ WG GQLG + + P V L G+ +
Sbjct: 148 KNIIQITCGDYHSLALSKGGELFAWGQNLDGQLGVGRIFASTST--PEIVENLSGVPLVQ 205
Query: 288 VACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGV 347
++ G HS AL+ G +Y+WG + GQLGLG +++ ES + + V
Sbjct: 206 ISAGEAHSMALSMSGNVYSWGRNDCGQLGLG---HTYN---KESPSCIEALD----DQKV 255
Query: 348 QLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGG 406
+ +ACG HT + + G + +G YGQ + + P V VG V ++A G
Sbjct: 256 EFLACGGCHTALLTKSGLVFTFGDGKYGQLGHNSTQNELRPRLVTGLVGNRVTQIACGRQ 315
Query: 407 HS-AVLAD 413
H+ A ++D
Sbjct: 316 HTLAYVSD 323
Score = 225 (84.3 bits), Expect = 3.6e-15, P = 3.6e-15
Identities = 72/249 (28%), Positives = 117/249 (46%)
Query: 65 LDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTE-EGRKHPEKVKQLQSEFVKSISCG- 122
+ I CG H+ A++ G LF WG N GQLG G PE V+ L + IS G
Sbjct: 151 IQITCGDYHSLALSKGGELFAWGQNLDGQLGVGRIFASTSTPEIVENLSGVPLVQISAGE 210
Query: 123 AHCTA-AIAEPRENDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVA 181
AH A +++ + G +L + G P A + ++CG H
Sbjct: 211 AHSMALSMSGNVYSWGRNDCGQLGL-GHTYNKESPSCI-EALDDQKVEF-LACGGCHTAL 267
Query: 182 LSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSA 241
L++ GL+ +G +YGQLG T L+ PR++ G ++TQ++CG H+
Sbjct: 268 LTKSGLVFTFGDGKYGQLGHNSTQNELR-PRLVTGLVG--------NRVTQIACGRQHTL 318
Query: 242 A-VSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTS 300
A VS+ G+V+++G G GQLG+ ++ +L+PR + L +K + V + +
Sbjct: 319 AYVSDTGKVFSFGSGKEGQLGNGGTRN---QLIPRPMKLLSSEELKSESSTSVKELIMVA 375
Query: 301 KG--ALYAW 307
G ++ W
Sbjct: 376 GGNQSILIW 384
Score = 195 (73.7 bits), Expect = 7.1e-12, P = 7.1e-12
Identities = 66/233 (28%), Positives = 104/233 (44%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ WG N GQ G GR ++ L G P + I+ G H+ A++ G
Sbjct: 169 LFAWGQNLDGQLG-VGRIFASTSTPEIVENLSGVPL------VQISAGEAHSMALSMSGN 221
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
+++WG N+ GQLG G ++ P ++ L + V+ ++CG C A+ T
Sbjct: 222 VYSWGRNDCGQLGLGHTYNKESPSCIEALDDQKVEFLACGG-CHTALLTKSGLVFTFGDG 280
Query: 143 RLWVWGQNQGSNF--PRLFWGAFTPNTIICQVSCGSVHVVA-LSECGLLQAWGYNEYGQL 199
+ G N N PRL G N + Q++CG H +A +S+ G + ++G + GQL
Sbjct: 281 KYGQLGHNSTQNELRPRLVTG-LVGNRVT-QIACGRQHTLAYVSDTGKVFSFGSGKEGQL 338
Query: 200 GRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTW 252
G G T L PR +K L + EL+ + S E A N + W
Sbjct: 339 GNGGTRNQLI-PRPMK-----LLSSEELKSESSTSVKELIMVA-GGNQSILIW 384
>UNIPROTKB|F1PB99 [details] [associations]
symbol:HERC5 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005622 "intracellular" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
Pfam:PF00632 InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0016567 GO:GO:0005622
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 SUPFAM:SSF56204
GeneTree:ENSGT00660000095216 OMA:KDWITNT EMBL:AAEX03016753
EMBL:AAEX03016752 Ensembl:ENSCAFT00000015560 Uniprot:F1PB99
Length = 1025
Score = 268 (99.4 bits), Expect = 6.6e-20, P = 6.6e-20
Identities = 81/229 (35%), Positives = 121/229 (52%)
Query: 111 LQSEFVKSISCGAHCTAAIAEPRENDGTISTSRLWVWGQN-QGS-NFPRLFWGAFTPNTI 168
LQ + + I+CG + + A+++ + + L+ WGQN G RLF TP +
Sbjct: 132 LQEKSIIQITCGDYHSLALSKGQGGE-------LFAWGQNLHGQLGVGRLFTSIPTPQLV 184
Query: 169 -------ICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFL 221
+ Q+S G H +ALS G + +WG N+ GQLG G T G P +I
Sbjct: 185 EHLSGVPLVQISAGKAHSMALSMSGNIYSWGRNDLGQLGLGHT-NGEDFPSLI------- 236
Query: 222 DEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALD 281
EA + +K+ ++CG H+A ++++G V+T+G G GQLGH S Q+ EL PR V L
Sbjct: 237 -EALDNQKVEFLACGGSHTALLTKDGLVFTFGAGKYGQLGHNSTQN---ELRPRLVTELA 292
Query: 282 GIFIKDVACGGV-HSCALTSK-GALYAWGGSQAGQLGLGPQTRSFSLIP 328
G + VACG H+ A S G ++++G + GQLG G T + LIP
Sbjct: 293 GNRVTQVACGSRWHTLAYVSDLGKVFSFGSGKEGQLGNGG-THN-QLIP 339
Score = 226 (84.6 bits), Expect = 3.0e-15, P = 3.0e-15
Identities = 65/208 (31%), Positives = 97/208 (46%)
Query: 228 EKITQVSCGEYHSAAVS--ENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFI 285
+ I Q++CG+YHS A+S + GE++ WG GQLG L + P+ V L G+ +
Sbjct: 135 KSIIQITCGDYHSLALSKGQGGELFAWGQNLHGQLGVGRLFTSIPT--PQLVEHLSGVPL 192
Query: 286 KDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPN 345
++ G HS AL+ G +Y+WG + GQLGLG T N D F ++ +
Sbjct: 193 VQISAGKAHSMALSMSGNIYSWGRNDLGQLGLG-HT-------NGED--FPSLIEALDNQ 242
Query: 346 GVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGG 405
V+ +ACG SHT + +DG + +G YGQ + + P V G A G
Sbjct: 243 KVEFLACGGSHTALLTKDGLVFTFGAGKYGQLGHNSTQNELRPRLVTELAGNRVTQVACG 302
Query: 406 GHSAVLADACSLKELCEFRLAESVTLSN 433
LA L ++ F + L N
Sbjct: 303 SRWHTLAYVSDLGKVFSFGSGKEGQLGN 330
Score = 210 (79.0 bits), Expect = 1.8e-13, P = 1.8e-13
Identities = 67/205 (32%), Positives = 103/205 (50%)
Query: 65 LDIACGHEHTAAVASD--GTLFTWGANEFGQLGDGTE-EGRKHPEKVKQLQSEFVKSISC 121
+ I CG H+ A++ G LF WG N GQLG G P+ V+ L + IS
Sbjct: 138 IQITCGDYHSLALSKGQGGELFAWGQNLHGQLGVGRLFTSIPTPQLVEHLSGVPLVQISA 197
Query: 122 G-AHCTA-AIAEPRENDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHV 179
G AH A +++ + G +L + G G +FP L N + ++CG H
Sbjct: 198 GKAHSMALSMSGNIYSWGRNDLGQLGL-GHTNGEDFPSLIEAL--DNQKVEFLACGGSHT 254
Query: 180 VALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGE-Y 238
L++ GL+ +G +YGQLG T L+ PR++ A ++TQV+CG +
Sbjct: 255 ALLTKDGLVFTFGAGKYGQLGHNSTQNELR-PRLVTELAG--------NRVTQVACGSRW 305
Query: 239 HSAA-VSENGEVYTWGLGSVGQLGH 262
H+ A VS+ G+V+++G G GQLG+
Sbjct: 306 HTLAYVSDLGKVFSFGSGKEGQLGN 330
Score = 197 (74.4 bits), Expect = 1.6e-11, Sum P(2) = 1.6e-11
Identities = 63/190 (33%), Positives = 94/190 (49%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPK-QLPPELFGCPAGANSRWLDIACGHEHTAAVASDG 81
++ WG N GQ G GR IP QL L G P + I+ G H+ A++ G
Sbjct: 158 LFAWGQNLHGQLG-VGR-LFTSIPTPQLVEHLSGVPL------VQISAGKAHSMALSMSG 209
Query: 82 TLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIST 141
+++WG N+ GQLG G G P ++ L ++ V+ ++CG TA + + DG + T
Sbjct: 210 NIYSWGRNDLGQLGLGHTNGEDFPSLIEALDNQKVEFLACGGSHTALLTK----DGLVFT 265
Query: 142 SRLWVWGQ---NQGSNF--PRLFWGAFTPNTIICQVSCGSV-HVVA-LSECGLLQAWGYN 194
+GQ N N PRL N + QV+CGS H +A +S+ G + ++G
Sbjct: 266 FGAGKYGQLGHNSTQNELRPRLVT-ELAGNRVT-QVACGSRWHTLAYVSDLGKVFSFGSG 323
Query: 195 EYGQLGRGIT 204
+ GQLG G T
Sbjct: 324 KEGQLGNGGT 333
Score = 42 (19.8 bits), Expect = 1.6e-11, Sum P(2) = 1.6e-11
Identities = 7/18 (38%), Positives = 12/18 (66%)
Query: 217 YAKFLDEAPELEKITQVS 234
+ K LD+ P LE + ++S
Sbjct: 794 FKKLLDQTPSLEDLKELS 811
>TAIR|locus:2086253 [details] [associations]
symbol:AT3G23270 "AT3G23270" species:3702 "Arabidopsis
thaliana" [GO:0003682 "chromatin binding" evidence=ISS] [GO:0005543
"phospholipid binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=ISM] [GO:0008536 "Ran GTPase binding" evidence=ISS]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0007165 "signal
transduction" evidence=ISS] [GO:0035091 "phosphatidylinositol
binding" evidence=ISS] [GO:0009827 "plant-type cell wall
modification" evidence=RCA] [GO:0009860 "pollen tube growth"
evidence=RCA] InterPro:IPR000306 InterPro:IPR001849
InterPro:IPR024774 Pfam:PF01363 Pfam:PF12814 PROSITE:PS50003
SMART:SM00064 SMART:SM00233 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005938 EMBL:CP002686 GO:GO:0005543 Gene3D:2.30.29.30
InterPro:IPR011993 GO:GO:0046872 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 Gene3D:3.30.40.10
InterPro:IPR017455 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 PROSITE:PS50178 PRINTS:PR00633 PROSITE:PS50012
GO:GO:0032065 InterPro:IPR013591 Pfam:PF08381 PROSITE:PS51514
IPI:IPI00516271 RefSeq:NP_188968.1 UniGene:At.53452
ProteinModelPortal:F4J2Y2 SMR:F4J2Y2 PRIDE:F4J2Y2
EnsemblPlants:AT3G23270.1 GeneID:821906 KEGG:ath:AT3G23270
OMA:PKFRAFR ArrayExpress:F4J2Y2 Uniprot:F4J2Y2
Length = 1045
Score = 271 (100.5 bits), Expect = 1.2e-19, Sum P(2) = 1.2e-19
Identities = 90/303 (29%), Positives = 145/303 (47%)
Query: 23 IYVWGYN-HS-GQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASD 80
++ WG H+ G G G + IPK++ L G L +ACG H+A ++
Sbjct: 324 LFSWGDGIHNVGLLGH-GSDISHWIPKRVSGPLEGLQV------LSVACGTWHSALATAN 376
Query: 81 GTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIS 140
G LFT+G FG LG G E +P++V+ L ++C TAAI E T
Sbjct: 377 GKLFTFGDGAFGVLGHGNRESVSYPKEVQSLNGLKTVKVACSIWHTAAIVEVMGQTATSM 436
Query: 141 TSR-LWVWG---QNQ-GSNFPRLFWGAFTPNTIIC----QVSCGSVHVVALSECGLLQAW 191
+SR L+ WG +N+ G + +++I +++CG VAL+ G +
Sbjct: 437 SSRKLFTWGDGDKNRLGHGNKETYLLPTCVSSLIDYNFHKIACGHTFTVALTTSGHVFTM 496
Query: 192 GYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYT 251
G +GQLG I+ +G + P +++ + + E E +++CG +H A ++ EV+T
Sbjct: 497 GGTAHGQLGNSIS-DG-KLPCLVQD--RLVGEFVE-----EIACGAHHVAVLTSRSEVFT 547
Query: 252 WGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAW--GG 309
WG G+ G+LGH + DK P V AL +K ++CG TS ++ W G
Sbjct: 548 WGKGANGRLGHGDTE--DKRT-PTLVEALRDRHVKSLSCGS----NFTSSICIHKWVSGA 600
Query: 310 SQA 312
Q+
Sbjct: 601 DQS 603
Score = 247 (92.0 bits), Expect = 1.5e-17, P = 1.5e-17
Identities = 86/326 (26%), Positives = 137/326 (42%)
Query: 67 IACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCT 126
I CG H A V G +FTWG G+LG G + P+ V+ L + ++CG + T
Sbjct: 256 IVCGVRHVALVTRQGEVFTWGEEVGGRLGHGIQVDISRPKLVEFLALTNIDFVACGEYHT 315
Query: 127 AAIAEPRE----NDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVAL 182
++ + DG I L G + P+ G ++ V+CG+ H
Sbjct: 316 CVVSTSGDLFSWGDG-IHNVGLLGHGSDISHWIPKRVSGPLEGLQVL-SVACGTWHSALA 373
Query: 183 SECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAA 242
+ G L +G +G LG G E + P+ ++ K +V+C +H+AA
Sbjct: 374 TANGKLFTFGDGAFGVLGHG-NRESVSYPKEVQSLNGL--------KTVKVACSIWHTAA 424
Query: 243 VSE----------NGEVYTWGLGSVGQLGHCSLQSGDKE--LLPRRVVALDGIFIKDVAC 290
+ E + +++TWG G +LGH G+KE LLP V +L +AC
Sbjct: 425 IVEVMGQTATSMSSRKLFTWGDGDKNRLGH-----GNKETYLLPTCVSSLIDYNFHKIAC 479
Query: 291 GGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLV 350
G + ALT+ G ++ GG+ GQLG + + +V V+ +
Sbjct: 480 GHTFTVALTTSGHVFTMGGTAHGQLGNSISDGKLPCLVQDR----------LVGEFVEEI 529
Query: 351 ACGHSHTLVYMRDGRIHGWGYNSYGQ 376
ACG H V + WG + G+
Sbjct: 530 ACGAHHVAVLTSRSEVFTWGKGANGR 555
Score = 240 (89.5 bits), Expect = 8.9e-17, P = 8.9e-17
Identities = 98/357 (27%), Positives = 163/357 (45%)
Query: 1 MDINEIIGETARPVDNIPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGA 60
+D+++I+ R V + + ++ WG G GR G Q+ I + P+L A
Sbjct: 251 LDVHQIVCGV-RHVALVTRQGEVFTWG-EEVG--GRLGHGIQVDISR---PKLVEFLALT 303
Query: 61 NSRWLDIACGHEHTAAVASDGTLFTWG--ANEFGQLGDGTEEGRKHPEKVK-QLQSEFVK 117
N + +ACG HT V++ G LF+WG + G LG G++ P++V L+ V
Sbjct: 304 NIDF--VACGEYHTCVVSTSGDLFSWGDGIHNVGLLGHGSDISHWIPKRVSGPLEGLQVL 361
Query: 118 SISCGA-HCTAAIAEPRENDGTISTSRLWVWGQ-NQGS-NFPRLFWGAFTPNTIICQVSC 174
S++CG H +A+A T V G N+ S ++P+ T+ +V+C
Sbjct: 362 SVACGTWH--SALATANGKLFTFGDGAFGVLGHGNRESVSYPKEVQSLNGLKTV--KVAC 417
Query: 175 GSVHVVALSEC-GL---------LQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEA 224
H A+ E G L WG + +LG G E P + +
Sbjct: 418 SIWHTAAIVEVMGQTATSMSSRKLFTWGDGDKNRLGHG-NKETYLLPTCVSSLIDY---- 472
Query: 225 PELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPR-RVVALDGI 283
KI +CG + A++ +G V+T G + GQLG+ S+ G L + R+V G
Sbjct: 473 -NFHKI---ACGHTFTVALTTSGHVFTMGGTAHGQLGN-SISDGKLPCLVQDRLV---GE 524
Query: 284 FIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGP--QTRSFSLIPNESDTYFRNI 338
F++++ACG H LTS+ ++ WG G+LG G R+ +L+ D + +++
Sbjct: 525 FVEEIACGAHHVAVLTSRSEVFTWGKGANGRLGHGDTEDKRTPTLVEALRDRHVKSL 581
Score = 179 (68.1 bits), Expect = 4.5e-10, P = 4.5e-10
Identities = 54/187 (28%), Positives = 84/187 (44%)
Query: 230 ITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVA 289
+ Q+ CG H A V+ GEV+TWG G+LGH +Q P+ V L I VA
Sbjct: 253 VHQIVCGVRHVALVTRQGEVFTWGEEVGGRLGH-GIQVDISR--PKLVEFLALTNIDFVA 309
Query: 290 CGGVHSCALTSKGALYAWGGS--QAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGV 347
CG H+C +++ G L++WG G LG G + IP + +L V
Sbjct: 310 CGEYHTCVVSTSGDLFSWGDGIHNVGLLGHGSDISHW--IPKRVSGPLEGLQVLSV---- 363
Query: 348 QLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGG 406
ACG H+ + +G++ +G ++G + YP V G + K+A
Sbjct: 364 ---ACGTWHSALATANGKLFTFGDGAFGVLGHGNRESVSYPKEVQSLNGLKTVKVACSIW 420
Query: 407 HSAVLAD 413
H+A + +
Sbjct: 421 HTAAIVE 427
Score = 152 (58.6 bits), Expect = 3.9e-07, P = 3.9e-07
Identities = 44/126 (34%), Positives = 63/126 (50%)
Query: 66 DIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHC 125
+IACG H A + S +FTWG G+LG G E ++ P V+ L+ VKS+SCG++
Sbjct: 528 EIACGAHHVAVLTSRSEVFTWGKGANGRLGHGDTEDKRTPTLVEALRDRHVKSLSCGSNF 587
Query: 126 TAAIAEPRENDGTISTSRLWVWGQNQG-SNFPRLFWGAFTPNTIICQVSCGSVHVVALSE 184
T++I + WV G +Q + R +G FT C +CG VH A S
Sbjct: 588 TSSICIHK-----------WVSGADQSICSGCRQAFG-FTRKRHNCY-NCGLVHCHACSS 634
Query: 185 CGLLQA 190
L+A
Sbjct: 635 KKALKA 640
Score = 140 (54.3 bits), Expect = 7.9e-06, P = 7.9e-06
Identities = 52/176 (29%), Positives = 80/176 (45%)
Query: 247 GEVYTWG-LGSVGQL--GHCSLQSGDKELL-PRRVVALDGIFIKDVACGGVHSCALTSKG 302
G+VY WG + + G L G S ++ ++L PR + + + + + CG H +T +G
Sbjct: 211 GDVYVWGEVWTEGILPDGTASNETVKTDVLTPRPLESNVVLDVHQIVCGVRHVALVTRQG 270
Query: 303 ALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMR 362
++ WG G+LG G Q S P + + L + N + VACG HT V
Sbjct: 271 EVFTWGEEVGGRLGHGIQV-DISR-P-------KLVEFLALTN-IDFVACGEYHTCVVST 320
Query: 363 DGRIHGWG--YNSYGQAANEKSTYAWYPSPVDWCV-G-EVRKLAAGGGHSAVLADA 414
G + WG ++ G + W P V + G +V +A G HSA LA A
Sbjct: 321 SGDLFSWGDGIHNVGLLGHGSDISHWIPKRVSGPLEGLQVLSVACGTWHSA-LATA 375
Score = 40 (19.1 bits), Expect = 1.2e-19, Sum P(2) = 1.2e-19
Identities = 10/17 (58%), Positives = 11/17 (64%)
Query: 290 CGGVHSCALTSKGALYA 306
CG VH A +SK AL A
Sbjct: 624 CGLVHCHACSSKKALKA 640
>RGD|1592835 [details] [associations]
symbol:Rcc1 "regulator of chromosome condensation 1"
species:10116 "Rattus norvegicus" [GO:0000082 "G1/S transition of
mitotic cell cycle" evidence=ISO] [GO:0000790 "nuclear chromatin"
evidence=ISO] [GO:0000794 "condensed nuclear chromosome"
evidence=ISO] [GO:0003682 "chromatin binding" evidence=ISO]
[GO:0005087 "Ran guanyl-nucleotide exchange factor activity"
evidence=ISO] [GO:0005634 "nucleus" evidence=ISO] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0007052 "mitotic spindle
organization" evidence=ISO] [GO:0007059 "chromosome segregation"
evidence=ISO] [GO:0007088 "regulation of mitosis" evidence=ISO]
[GO:0007090 "regulation of S phase of mitotic cell cycle"
evidence=ISO] [GO:0031492 "nucleosomal DNA binding" evidence=ISO]
[GO:0031965 "nuclear membrane" evidence=ISO] [GO:0042393 "histone
binding" evidence=ISO] [GO:0050790 "regulation of catalytic
activity" evidence=ISO] [GO:0051225 "spindle assembly"
evidence=ISO] [GO:0005730 "nucleolus" evidence=ISO] RGD:1592835
INTERPRO:IPR000408 Pfam:PF00415 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00625
PROSITE:PS00626 PROSITE:PS50012 EMBL:CH473968 KO:K11493 CTD:1104
HOVERGEN:HBG017712 EMBL:BC160834 IPI:IPI00896784
RefSeq:NP_001121661.1 UniGene:Rn.217123 SMR:B1H227 GeneID:682908
KEGG:rno:682908 NextBio:724000 Genevestigator:B1H227 Uniprot:B1H227
Length = 421
Score = 255 (94.8 bits), Expect = 2.1e-19, P = 2.1e-19
Identities = 108/368 (29%), Positives = 166/368 (45%)
Query: 70 GHEHTAAVASDGTLFTWGANEFGQLG-DGTEEGRKH-PEKVKQLQSEFVKSISCGAHCTA 127
G HT ++ G ++++G N+ G LG D + EG + P KV +LQ + V+ +S G TA
Sbjct: 75 GGMHTVCLSQSGQVYSFGCNDEGALGRDTSVEGSEMVPGKV-ELQEKVVQ-VSAGDSHTA 132
Query: 128 AIAEPRENDGTISTSRLWVWGQNQGSN----FPRLFWGAFTP-----NTIICQVSCGSVH 178
A+ E DG R+++WG + +N + P +T + +V+ G+ H
Sbjct: 133 ALTE----DG-----RVFLWGSFRDNNGVIGLLEPMKKSMVPVQVQLDTQVVKVASGNDH 183
Query: 179 VVALSECGLLQAWGYNEYGQLGRG----ITCEGLQG-PRVIKGYAKFLDEAPELEKIT-- 231
+V L+ G L G E GQLGR G QG R++ L ++
Sbjct: 184 LVMLTTDGDLYTLGCGEQGQLGRVPELFANRGGRQGLERLLVPRCVLLKSRGTRGRVRFQ 243
Query: 232 QVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVA-C 290
CG Y + A+S G VY +GL + QLG S +P+ + + V
Sbjct: 244 DAFCGAYFTFAISREGHVYGFGLSNYHQLGTPGTGSC---FIPQNLTSFKNSTKSWVGFS 300
Query: 291 GGVH-SCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQL 349
GG H + + S+G Y+ G ++ G+LGLG S IP T +P+ V
Sbjct: 301 GGQHHTVCMDSEGKAYSLGRAEYGRLGLGEGAEEKS-IP----TLISRLPV------VSS 349
Query: 350 VACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG------EVRKLAA 403
VACG S +DGR+ WG + Q + AW SPV+ G EV +++
Sbjct: 350 VACGASVGYAVSKDGRVFAWGMGTNYQLGTGQEDDAW--SPVEM-TGKQLENREVLTVSS 406
Query: 404 GGGHSAVL 411
GG H+ +L
Sbjct: 407 GGQHTVLL 414
Score = 226 (84.6 bits), Expect = 4.8e-16, P = 4.8e-16
Identities = 74/258 (28%), Positives = 119/258 (46%)
Query: 169 ICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELE 228
+ Q G +H V LS+ G + ++G N+ G LGR + EG + ++ G + E
Sbjct: 69 VVQAEAGGMHTVCLSQSGQVYSFGCNDEGALGRDTSVEGSE---MVPGKVELQ------E 119
Query: 229 KITQVSCGEYHSAAVSENGEVYTWGL--GSVGQLGHCSLQSGDKELLPRRVVALDGIFIK 286
K+ QVS G+ H+AA++E+G V+ WG + G +G L+ K ++P +V LD +K
Sbjct: 120 KVVQVSAGDSHTAALTEDGRVFLWGSFRDNNGVIG--LLEPMKKSMVPVQV-QLDTQVVK 176
Query: 287 DVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIP--ILVVP 344
VA G H LT+ G LY G + GQLG P+ F+ +P +L+
Sbjct: 177 -VASGNDHLVMLTTDGDLYTLGCGEQGQLGRVPEL--FANRGGRQGLERLLVPRCVLLKS 233
Query: 345 NGV------QLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEV 398
G Q CG T R+G ++G+G ++Y Q + + P +
Sbjct: 234 RGTRGRVRFQDAFCGAYFTFAISREGHVYGFGLSNYHQLGTPGTGSCFIPQNLTSFKNST 293
Query: 399 RKLA--AGGGHSAVLADA 414
+ +GG H V D+
Sbjct: 294 KSWVGFSGGQHHTVCMDS 311
Score = 169 (64.5 bits), Expect = 1.3e-09, P = 1.3e-09
Identities = 90/332 (27%), Positives = 144/332 (43%)
Query: 73 HTAAVASDGTLFTWGANEFGQLGDGTEE-GRKHPEKVKQLQSEFVKSISCGAHCTAAIAE 131
H + G + T G + GQLG G RK P V LQ + V++ + G H T +++
Sbjct: 27 HRSHNTEPGLVLTLGQGDVGQLGLGESVLERKKPALVPLLQ-DVVQAEAGGMH-TVCLSQ 84
Query: 132 PRE--NDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQ 189
+ + G L G++ + G + QVS G H AL+E G +
Sbjct: 85 SGQVYSFGCNDEGAL---GRDTSVEGSEMVPGKVELQEKVVQVSAGDSHTAALTEDGRVF 141
Query: 190 AWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELE-KITQVSCGEYHSAAVSENGE 248
WG + G+ GL P +K + +L+ ++ +V+ G H ++ +G+
Sbjct: 142 LWG--SFRD-NNGVI--GLLEP--MK--KSMVPVQVQLDTQVVKVASGNDHLVMLTTDGD 192
Query: 249 VYTWGLGSVGQLGHC--------SLQSGDKELLPRRVVALD-G----IFIKDVACGGVHS 295
+YT G G GQLG Q ++ L+PR V+ G + +D CG +
Sbjct: 193 LYTLGCGEQGQLGRVPELFANRGGRQGLERLLVPRCVLLKSRGTRGRVRFQDAFCGAYFT 252
Query: 296 CALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHS 355
A++ +G +Y +G S QLG P T S IP ++ T F+N V G + G
Sbjct: 253 FAISREGHVYGFGLSNYHQLGT-PGTGS-CFIP-QNLTSFKNSTKSWV--GF---SGGQH 304
Query: 356 HTLVYMRDGRIHGWGYNSYG-----QAANEKS 382
HT+ +G+ + G YG + A EKS
Sbjct: 305 HTVCMDSEGKAYSLGRAEYGRLGLGEGAEEKS 336
Score = 167 (63.8 bits), Expect = 2.2e-09, P = 2.2e-09
Identities = 89/360 (24%), Positives = 147/360 (40%)
Query: 23 IYVWGYNHSGQTGRKGR-ERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDG 81
+Y +G N G GR E +P ++ EL + + ++ G HTAA+ DG
Sbjct: 88 VYSFGCNDEGALGRDTSVEGSEMVPGKV--EL-------QEKVVQVSAGDSHTAALTEDG 138
Query: 82 TLFTWGA--NEFGQLGDGTEEGRKHPEKVK-QLQSEFVKSISCGAHCTAAIAEPR----- 133
+F WG+ + G +G E +K V+ QL ++ VK S H +
Sbjct: 139 RVFLWGSFRDNNGVIGL-LEPMKKSMVPVQVQLDTQVVKVASGNDHLVMLTTDGDLYTLG 197
Query: 134 -ENDGTIS-TSRLWV-WGQNQGSN---FPR--LFWGAFTPNTIICQVS-CGSVHVVALSE 184
G + L+ G QG PR L T + Q + CG+ A+S
Sbjct: 198 CGEQGQLGRVPELFANRGGRQGLERLLVPRCVLLKSRGTRGRVRFQDAFCGAYFTFAISR 257
Query: 185 CGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVS 244
G + +G + Y QLG G + + F + + S G++H+ +
Sbjct: 258 EGHVYGFGLSNYHQLGT----PGTGSCFIPQNLTSFKNST---KSWVGFSGGQHHTVCMD 310
Query: 245 ENGEVYTWGLGSVGQLGHCSLQSGDKEL-LPRRVVALDGIFIKDVACGGVHSCALTSKGA 303
G+ Y+ G G+LG L G +E +P + L + VACG A++ G
Sbjct: 311 SEGKAYSLGRAEYGRLG---LGEGAEEKSIPTLISRLP--VVSSVACGASVGYAVSKDGR 365
Query: 304 LYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRD 363
++AWG QLG G + ++S + + N +L V +G Q HT++ ++D
Sbjct: 366 VFAWGMGTNYQLGTGQEDDAWSPV-EMTGKQLENREVLTVSSGGQ-------HTVLLVKD 417
Score = 162 (62.1 bits), Expect = 7.8e-09, P = 7.8e-09
Identities = 54/206 (26%), Positives = 90/206 (43%)
Query: 183 SECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAA 242
+E GL+ G + GQLG G + + P ++ P L+ + Q G H+
Sbjct: 32 TEPGLVLTLGQGDVGQLGLGESVLERKKPALV----------PLLQDVVQAEAGGMHTVC 81
Query: 243 VSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKG 302
+S++G+VY++G G LG + G E++P +V + + V+ G H+ ALT G
Sbjct: 82 LSQSGQVYSFGCNDEGALGRDTSVEGS-EMVPGKVELQEKVV--QVSAGDSHTAALTEDG 138
Query: 303 ALYAWGG--SQAGQLGL-GPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLV 359
++ WG G +GL P +S + + DT V VA G+ H ++
Sbjct: 139 RVFLWGSFRDNNGVIGLLEPMKKSMVPVQVQLDTQ------------VVKVASGNDHLVM 186
Query: 360 YMRDGRIHGWGYNSYGQAANEKSTYA 385
DG ++ G GQ +A
Sbjct: 187 LTTDGDLYTLGCGEQGQLGRVPELFA 212
Score = 136 (52.9 bits), Expect = 5.9e-06, P = 5.9e-06
Identities = 71/261 (27%), Positives = 108/261 (41%)
Query: 212 RVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKE 271
R+ K + D P+ +K+ +VS H + +E G V T G G VGQLG G+
Sbjct: 5 RIAKRRSPPEDAIPKSKKV-KVS----HRSHNTEPGLVLTLGQGDVGQLG-----LGES- 53
Query: 272 LLPRRVVALDGIFIKDVA---CGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIP 328
+L R+ AL + ++DV GG+H+ L+ G +Y++G + G LG ++P
Sbjct: 54 VLERKKPALVPL-LQDVVQAEAGGMHTVCLSQSGQVYSFGCNDEGALGRDTSVEGSEMVP 112
Query: 329 NESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGY---NSYGQAANEKSTYA 385
+ + + V V+ G SHT DGR+ WG N+ E +
Sbjct: 113 GKVE----------LQEKVVQVSAGDSHTAALTEDGRVFLWGSFRDNNGVIGLLEPMKKS 162
Query: 386 WYPSPVDWCVGEVRKLAAGGGHSAVLADACSLKEL-CEFRLAESVTLSNASEI-EDVASR 443
P V +V K+A+G H +L L L C E L E+ + R
Sbjct: 163 MVPVQVQLDT-QVVKVASGNDHLVMLTTDGDLYTLGC----GEQGQLGRVPELFANRGGR 217
Query: 444 TGSEAL-ARLCERLREHSLHG 463
G E L C L+ G
Sbjct: 218 QGLERLLVPRCVLLKSRGTRG 238
>UNIPROTKB|P18754 [details] [associations]
symbol:RCC1 "Regulator of chromosome condensation"
species:9606 "Homo sapiens" [GO:0007067 "mitosis" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] [GO:0005087 "Ran
guanyl-nucleotide exchange factor activity" evidence=IDA]
[GO:0003682 "chromatin binding" evidence=IDA] [GO:0007088
"regulation of mitosis" evidence=IDA] [GO:0000082 "G1/S transition
of mitotic cell cycle" evidence=IMP] [GO:0007090 "regulation of S
phase of mitotic cell cycle" evidence=IMP] [GO:0042393 "histone
binding" evidence=IDA] [GO:0000790 "nuclear chromatin"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0000794 "condensed nuclear chromosome" evidence=IDA]
[GO:0007052 "mitotic spindle organization" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0031492 "nucleosomal DNA binding" evidence=IDA]
[GO:0051225 "spindle assembly" evidence=IMP] [GO:0007059
"chromosome segregation" evidence=IMP] [GO:0005654 "nucleoplasm"
evidence=TAS] [GO:0016032 "viral reproduction" evidence=TAS]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0031965 "nuclear
membrane" evidence=IDA] INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005737 Reactome:REACT_116125 GO:GO:0007088 GO:GO:0007059
GO:GO:0005654 GO:GO:0016032 GO:GO:0051301 GO:GO:0007067
GO:GO:0007052 GO:GO:0051225 GO:GO:0000082 GO:GO:0031965
GO:GO:0000790 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
GO:GO:0000794 GO:GO:0042393 GO:GO:0005087 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 eggNOG:COG5184
GO:GO:0007090 GO:GO:0031492 PDB:1I2M PDBsum:1I2M KO:K11493
EMBL:X12654 EMBL:X06130 EMBL:D00591 EMBL:AF498924 EMBL:BC007300
EMBL:BC010067 EMBL:BC036903 EMBL:BC069198 EMBL:S75708
IPI:IPI00001661 IPI:IPI00747309 PIR:A26691 RefSeq:NP_001041659.1
RefSeq:NP_001041660.1 RefSeq:NP_001041664.1 RefSeq:NP_001260.1
UniGene:Hs.469723 PDB:1A12 PDBsum:1A12 ProteinModelPortal:P18754
SMR:P18754 DIP:DIP-35416N IntAct:P18754 MINT:MINT-240062
STRING:P18754 PhosphoSite:P18754 DMDM:132170 PaxDb:P18754
PRIDE:P18754 DNASU:1104 Ensembl:ENST00000373831
Ensembl:ENST00000373832 Ensembl:ENST00000373833
Ensembl:ENST00000398958 GeneID:1104 KEGG:hsa:1104 UCSC:uc001bqa.2
UCSC:uc001bqf.2 CTD:1104 GeneCards:GC01P028834 HGNC:HGNC:1913
HPA:CAB015413 HPA:HPA027573 HPA:HPA027574 MIM:179710
neXtProt:NX_P18754 PharmGKB:PA26449 HOGENOM:HOG000234341
HOVERGEN:HBG017712 OMA:RETTEEG PhylomeDB:P18754
EvolutionaryTrace:P18754 GenomeRNAi:1104 NextBio:4572
ArrayExpress:P18754 Bgee:P18754 CleanEx:HS_RCC1
Genevestigator:P18754 GermOnline:ENSG00000180198 Uniprot:P18754
Length = 421
Score = 255 (94.8 bits), Expect = 2.1e-19, P = 2.1e-19
Identities = 121/446 (27%), Positives = 190/446 (42%)
Query: 1 MDINEIIGETARPVDNIPAKSAIYVWGYNHSGQTGR-----KGRERQL----RIPKQLPP 51
M I + P D IP + V +HS + G +G QL + ++ P
Sbjct: 1 MSPKRIAKRRSPPADAIPKSKKVKVSHRSHSTEPGLVLTLGQGDVGQLGLGENVMERKKP 60
Query: 52 ELFGCPAGANSRWLDIACGHEHTAAVASDGTLFTWGANEFGQLG-DGTEEGRKH-PEKVK 109
L P + G HT ++ G ++++G N+ G LG D + EG + P KV
Sbjct: 61 ALVSIPEDV----VQAEAGGMHTVCLSKSGQVYSFGCNDEGALGRDTSVEGSEMVPGKV- 115
Query: 110 QLQSEFVKSISCGAHCTAAIAEPRENDGTISTSRLWVWGQNQGSN----FPRLFWGAFTP 165
+LQ + V+ +S G TAA+ + DG R+++WG + +N + P
Sbjct: 116 ELQEKVVQ-VSAGDSHTAALTD----DG-----RVFLWGSFRDNNGVIGLLEPMKKSMVP 165
Query: 166 NTI-----ICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRG----ITCEGLQG-PRVIK 215
+ + +V+ G+ H+V L+ G L G E GQLGR G QG R++
Sbjct: 166 VQVQLDVPVVKVASGNDHLVMLTADGDLYTLGCGEQGQLGRVPELFANRGGRQGLERLLV 225
Query: 216 GYAKFLDEAPELEKIT--QVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELL 273
L + CG Y + A+S G VY +GL + QLG +S +
Sbjct: 226 PKCVMLKSRGSRGHVRFQDAFCGAYFTFAISHEGHVYGFGLSNYHQLGTPGTESC---FI 282
Query: 274 PRRVVALDGIFIKDVA-CGGVH-SCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNES 331
P+ + + V GG H + + S+G Y+ G ++ G+LGLG S IP
Sbjct: 283 PQNLTSFKNSTKSWVGFSGGQHHTVCMDSEGKAYSLGRAEYGRLGLGEGAEEKS-IP--- 338
Query: 332 DTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPV 391
T +P V VACG S +DGR+ WG + Q + AW SPV
Sbjct: 339 -TLISRLP------AVSSVACGASVGYAVTKDGRVFAWGMGTNYQLGTGQDEDAW--SPV 389
Query: 392 DWCVGE------VRKLAAGGGHSAVL 411
+ +G+ V +++GG H+ +L
Sbjct: 390 EM-MGKQLENRVVLSVSSGGQHTVLL 414
Score = 218 (81.8 bits), Expect = 4.0e-15, P = 4.0e-15
Identities = 75/267 (28%), Positives = 122/267 (45%)
Query: 165 PNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEA 224
P ++ Q G +H V LS+ G + ++G N+ G LGR + EG + ++ G +
Sbjct: 66 PEDVV-QAEAGGMHTVCLSKSGQVYSFGCNDEGALGRDTSVEGSE---MVPGKVELQ--- 118
Query: 225 PELEKITQVSCGEYHSAAVSENGEVYTWGL--GSVGQLGHCSLQSGDKELLPRRVVALDG 282
EK+ QVS G+ H+AA++++G V+ WG + G +G L+ K ++P +V LD
Sbjct: 119 ---EKVVQVSAGDSHTAALTDDGRVFLWGSFRDNNGVIG--LLEPMKKSMVPVQV-QLDV 172
Query: 283 IFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILV 342
+K VA G H LT+ G LY G + GQLG P+ L N + + L+
Sbjct: 173 PVVK-VASGNDHLVMLTADGDLYTLGCGEQGQLGRVPE-----LFANRGGR--QGLERLL 224
Query: 343 VPNGVQLVA-------------CGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPS 389
VP V L + CG T +G ++G+G ++Y Q + + P
Sbjct: 225 VPKCVMLKSRGSRGHVRFQDAFCGAYFTFAISHEGHVYGFGLSNYHQLGTPGTESCFIPQ 284
Query: 390 PVDWCVGEVRKLA--AGGGHSAVLADA 414
+ + +GG H V D+
Sbjct: 285 NLTSFKNSTKSWVGFSGGQHHTVCMDS 311
>DICTYBASE|DDB_G0282633 [details] [associations]
symbol:DDB_G0282633 "putative guanine nucleotide
exchange factor (GEF)" species:44689 "Dictyostelium discoideum"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR002110 InterPro:IPR000210
InterPro:IPR013069 Pfam:PF00651 PROSITE:PS50088 PROSITE:PS50097
SMART:SM00225 SMART:SM00248 dictyBase:DDB_G0282633
INTERPRO:IPR000408 Pfam:PF00415 EMBL:AAFI02000047 Gene3D:1.25.40.20
InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403 PROSITE:PS50297
Gene3D:3.30.710.10 InterPro:IPR011333 SUPFAM:SSF54695
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 eggNOG:COG5184
RefSeq:XP_640165.2 ProteinModelPortal:Q54S74
EnsemblProtists:DDB0234270 GeneID:8623703 KEGG:ddi:DDB_G0282633
OMA:RLAYLCN ProtClustDB:CLSZ2501699 Uniprot:Q54S74
Length = 919
Score = 260 (96.6 bits), Expect = 4.4e-19, P = 4.4e-19
Identities = 105/363 (28%), Positives = 165/363 (45%)
Query: 22 AIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDG 81
A+Y G G+TG K ++R + IP Q+ EL +N R IACG H+ A+ G
Sbjct: 214 AVYSSGLCSYGKTGHK-KKRDVLIPTQIL-EL------SNKRIKSIACGTHHSLAMDDLG 265
Query: 82 TLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTI-S 140
+++WG G+LG G + + + + F + AIA +N + S
Sbjct: 266 QVYSWGNGASGRLGLGNDFSIVPTPTLISVINRFGSN-----EIATAIAAGCDNSMILGS 320
Query: 141 TSRLWVWGQNQGSNFP-RLFWGAF----TPNTI--ICQ---VSCGSVHVVALSECGLLQA 190
++ +G N + GA TP I I Q ++C S H V L G +
Sbjct: 321 NGDVYSFGSNLHYKLGYKECDGALGFQSTPKKIPSILQMKSIACASWHSVFLDLKGRVYT 380
Query: 191 WGYNEYGQLGRGITCEGLQGP-RVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEV 249
G + G+LGR I+ P RV +K P+ E I Q++CG + +SE+G +
Sbjct: 381 CGSSTNGRLGRAISSYSSFYPERVSITNSKTNGTLPQEEVIKQIACGTNFTTVLSESGSL 440
Query: 250 YTWGLGSVGQLGHCSLQSGDKELL--PRRVVALDGIFIKDVACGGVHSCALTSKGALYAW 307
Y+WG+ + QLG +L G E P+ V AL+ I A G H AL+ +G ++ +
Sbjct: 441 YSWGVNTKSQLGLINLV-GISEYYSQPKLVTALNPYTIHSFAVGDQHVVALSDQGEVFCY 499
Query: 308 GGSQAGQLGLGPQTR-SFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMR-DGR 365
G + Q G G +L + +T + PI + GV V+ G S+T++ + D
Sbjct: 500 GDNSTLQCGFGEVLNFEINLTKVKIETTSSDAPI-IGGGGVFKVSAGGSNTMISLSSDHN 558
Query: 366 IHG 368
I G
Sbjct: 559 IFG 561
Score = 209 (78.6 bits), Expect = 1.9e-13, P = 1.9e-13
Identities = 68/256 (26%), Positives = 114/256 (44%)
Query: 166 NTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAP 225
N I ++CG+ H +A+ + G + +WG G+LG G + P +I +F
Sbjct: 245 NKRIKSIACGTHHSLAMDDLGQVYSWGNGASGRLGLGNDFSIVPTPTLISVINRFGSN-- 302
Query: 226 ELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGH--CSLQSGDKELLPRRVVALDGI 283
E T ++ G +S + NG+VY++G +LG+ C G + P+++ ++ +
Sbjct: 303 --EIATAIAAGCDNSMILGSNGDVYSFGSNLHYKLGYKECDGALGFQST-PKKIPSI--L 357
Query: 284 FIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNE-SDTYFRNIPILV 342
+K +AC HS L KG +Y G S G+LG + S S P S T + L
Sbjct: 358 QMKSIACASWHSVFLDLKGRVYTCGSSTNGRLGRAISSYS-SFYPERVSITNSKTNGTLP 416
Query: 343 VPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAA--NEKSTYAWYPSP-VDWCVGE-- 397
++ +ACG + T V G ++ WG N+ Q N +Y P + +
Sbjct: 417 QEEVIKQIACGTNFTTVLSESGSLYSWGVNTKSQLGLINLVGISEYYSQPKLVTALNPYT 476
Query: 398 VRKLAAGGGHSAVLAD 413
+ A G H L+D
Sbjct: 477 IHSFAVGDQHVVALSD 492
Score = 202 (76.2 bits), Expect = 1.1e-12, P = 1.1e-12
Identities = 78/320 (24%), Positives = 137/320 (42%)
Query: 70 GHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAI 129
G + + G +++ G +G+ G + P ++ +L ++ +KSI+CG H + A+
Sbjct: 202 GQNYNLILTDTGAVYSSGLCSYGKTGHKKKRDVLIPTQILELSNKRIKSIACGTHHSLAM 261
Query: 130 AEPRE--NDGTISTSRLWVWGQNQGSNFPRLFW--GAFTPNTIICQVSCGSVHVVALSEC 185
+ + + G ++ RL + P L F N I ++ G + + L
Sbjct: 262 DDLGQVYSWGNGASGRLGLGNDFSIVPTPTLISVINRFGSNEIATAIAAGCDNSMILGSN 321
Query: 186 GLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSE 245
G + ++G N + +LG C+G G + + P + ++ ++C +HS +
Sbjct: 322 GDVYSFGSNLHYKLGYK-ECDGALG------FQSTPKKIPSILQMKSIACASWHSVFLDL 374
Query: 246 NGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALD----GIF-----IKDVACGGVHSC 296
G VYT G + G+LG S P RV + G IK +ACG +
Sbjct: 375 KGRVYTCGSSTNGRLGRAI--SSYSSFYPERVSITNSKTNGTLPQEEVIKQIACGTNFTT 432
Query: 297 ALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVV---PNGVQLVACG 353
L+ G+LY+WG + QLGL +L+ S+ Y + P LV P + A G
Sbjct: 433 VLSESGSLYSWGVNTKSQLGL------INLV-GISEYYSQ--PKLVTALNPYTIHSFAVG 483
Query: 354 HSHTLVYMRDGRIHGWGYNS 373
H + G + +G NS
Sbjct: 484 DQHVVALSDQGEVFCYGDNS 503
Score = 170 (64.9 bits), Expect = 3.6e-09, P = 3.6e-09
Identities = 42/147 (28%), Positives = 74/147 (50%)
Query: 226 ELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFI 285
E+ Q G+ ++ +++ G VY+ GL S G+ GH + L+P +++ L I
Sbjct: 192 EISAPIQTEFGQNYNLILTDTGAVYSSGLCSYGKTGHKKKRD---VLIPTQILELSNKRI 248
Query: 286 KDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPN 345
K +ACG HS A+ G +Y+WG +G+LGLG FS++P + T I
Sbjct: 249 KSIACGTHHSLAMDDLGQVYSWGNGASGRLGLG---NDFSIVP--TPTLISVINRFGSNE 303
Query: 346 GVQLVACGHSHTLVYMRDGRIHGWGYN 372
+A G ++++ +G ++ +G N
Sbjct: 304 IATAIAAGCDNSMILGSNGDVYSFGSN 330
Score = 134 (52.2 bits), Expect = 3.0e-05, P = 3.0e-05
Identities = 53/228 (23%), Positives = 108/228 (47%)
Query: 171 QVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKI 230
Q G + + L++ G + + G YG+ G + L ++++ L ++I
Sbjct: 198 QTEFGQNYNLILTDTGAVYSSGLCSYGKTGHKKKRDVLIPTQILE-----LSN----KRI 248
Query: 231 TQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPR-RVVALDGIFIKD-- 287
++CG +HS A+ + G+VY+WG G+ G+LG D ++P ++++ F +
Sbjct: 249 KSIACGTHHSLAMDDLGQVYSWGNGASGRLG----LGNDFSIVPTPTLISVINRFGSNEI 304
Query: 288 ---VACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVP 344
+A G +S L S G +Y++G + +LG + +S + IP ++
Sbjct: 305 ATAIAAGCDNSMILGSNGDVYSFGSNLHYKLGYKECDGALGF---QSTP--KKIPSILQ- 358
Query: 345 NGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYA-WYPSPV 391
++ +AC H++ GR++ G ++ G+ S+Y+ +YP V
Sbjct: 359 --MKSIACASWHSVFLDLKGRVYTCGSSTNGRLGRAISSYSSFYPERV 404
>UNIPROTKB|Q7ZZC8 [details] [associations]
symbol:nek9 "Serine/threonine-protein kinase Nek9"
species:8355 "Xenopus laevis" [GO:0019901 "protein kinase binding"
evidence=ISS] InterPro:IPR000719 InterPro:IPR002290
InterPro:IPR008271 InterPro:IPR011009 Pfam:PF00069 PROSITE:PS00107
PROSITE:PS00108 PROSITE:PS50011 SMART:SM00220 INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005524 GO:GO:0005737 GO:GO:0019901
GO:GO:0051301 GO:GO:0007067 GO:GO:0046872 SUPFAM:SSF56112
GO:GO:0004674 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
HOVERGEN:HBG039572 EMBL:AY271412 UniGene:Xl.77246
ProteinModelPortal:Q7ZZC8 Xenbase:XB-GENE-974105 Uniprot:Q7ZZC8
Length = 944
Score = 260 (96.6 bits), Expect = 4.6e-19, P = 4.6e-19
Identities = 114/433 (26%), Positives = 186/433 (42%)
Query: 10 TARPVDNIPAKSA-IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIA 68
T P+ + ++S+ +YVWG G+T P++L ++F G +R +
Sbjct: 317 TEAPIAVVTSRSSEVYVWG---GGKT----------TPQKL--DVF--KGGWRAR--QVC 357
Query: 69 CGHEHTAAVASDGTLFTW-----GANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGA 123
G H A V + L+TW G+ GQLG G + P+ V++LQ + V+ +SCG+
Sbjct: 358 AGDAHFAVVTVEKELYTWVNMQGGSKLHGQLGHGDRASYRQPKHVEKLQGKSVQKVSCGS 417
Query: 124 HCTAAIAEPRE--NDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVA 181
T I + + + G+ L V Q+ GS F N + QVSCG H++A
Sbjct: 418 DFTVCITDEGQLYSFGSDYYGCLGV-NQSAGSEVLEPLLVDFFLNEPVDQVSCGDSHIMA 476
Query: 182 LSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSA 241
L+ + +WG EYG+LG + + P+ + E I V CG S
Sbjct: 477 LTRSKSVYSWGCGEYGRLGLDSE-DDVYSPQKV--------EVQRGLCIVNVCCGSDGSF 527
Query: 242 AVSENGEVYTWGLGSVGQLGHCSLQSG--DKEL---LPRRV---VALDGIF--IKDVACG 291
++ G+V GL +LG +G + E +P +A F I+ ++ G
Sbjct: 528 LLTLTGKVLACGLNEHNKLGLNQYTAGIINHEAFQEVPYTTSLTLAKQLSFYKIRSISPG 587
Query: 292 GVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVP-NGVQL- 349
H+ A+ +G L +G ++ GQLG+G + I +L P G Q+
Sbjct: 588 RTHTAAIDERGRLLTFGSNKCGQLGVGDYRKHLG------------INLLGGPLGGKQVI 635
Query: 350 -VACGHSHTLVYMRDGRIHGWGYNSYGQAA---NEKST-----YAWYPSPVDWCVGEVRK 400
V+CG T D I WG G+ A NE+ +W P P+ + V
Sbjct: 636 RVSCGDEFTTAATADNHIFAWGNGGNGRLAMTPNERPQGSDICTSW-PRPIFGSLHHVTD 694
Query: 401 LAAGGGHSAVLAD 413
L+ G H+ ++ +
Sbjct: 695 LSCRGWHTILIVE 707
Score = 149 (57.5 bits), Expect = 7.3e-07, P = 7.3e-07
Identities = 65/276 (23%), Positives = 120/276 (43%)
Query: 67 IACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCT 126
++CG H A+ ++++WG E+G+LG +E+ P+KV+ + + ++ CG+ +
Sbjct: 467 VSCGDSHIMALTRSKSVYSWGCGEYGRLGLDSEDDVYSPQKVEVQRGLCIVNVCCGSDGS 526
Query: 127 AAIAEPRE--NDGTISTSRLWVWGQNQGSNFPRLFWGA-FTPNTIICQ---------VSC 174
+ + G ++L + G F +T + + + +S
Sbjct: 527 FLLTLTGKVLACGLNEHNKLGLNQYTAGIINHEAFQEVPYTTSLTLAKQLSFYKIRSISP 586
Query: 175 GSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVS 234
G H A+ E G L +G N+ GQLG G + L G ++ G +++ +VS
Sbjct: 587 GRTHTAAIDERGRLLTFGSNKCGQLGVGDYRKHL-GINLLGGPLGG-------KQVIRVS 638
Query: 235 CG-EYHSAAVSENGEVYTWGLGSVGQLGHCSL---QSGDK-ELLPRRVVALDGIFIKDVA 289
CG E+ +AA ++N ++ WG G G+L Q D PR + + D++
Sbjct: 639 CGDEFTTAATADN-HIFAWGNGGNGRLAMTPNERPQGSDICTSWPRPIFG-SLHHVTDLS 696
Query: 290 CGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFS 325
C G H+ + K S + L +G +S S
Sbjct: 697 CRGWHTILIVEKVLNSKTIRSNSSGLSIGTLAQSCS 732
>UNIPROTKB|E2R5W9 [details] [associations]
symbol:RCCD1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005886 GO:GO:0005737 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 OMA:ERPGAWF GeneTree:ENSGT00700000104312
EMBL:AAEX03002330 EMBL:AAEX03002329 Ensembl:ENSCAFT00000035362
Uniprot:E2R5W9
Length = 313
Score = 188 (71.2 bits), Expect = 5.5e-19, Sum P(3) = 5.5e-19
Identities = 42/110 (38%), Positives = 65/110 (59%)
Query: 224 APELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGI 283
APEL + ++ G H+ + E G+V++WG G GQLGH SL++ E PR + AL G+
Sbjct: 92 APEL-RARRLELGAEHALLLDEAGQVFSWGQGRHGQLGHGSLEA---EPEPRLLEALQGL 147
Query: 284 FIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQT--RSFSLIPNES 331
+ +VA GG HS ++ G +Y WG +++GQL L ++ IP E+
Sbjct: 148 PVAEVAAGGWHSVCVSETGDIYIWGWNESGQLALPSRSLAEDTKTIPREA 197
Score = 163 (62.4 bits), Expect = 3.3e-15, Sum P(2) = 3.3e-15
Identities = 62/218 (28%), Positives = 96/218 (44%)
Query: 81 GTLFTWGANEFGQLGDGTEEGRK--HPEKVKQLQSEF-VKSISCGAHCTAAIAEPRENDG 137
G+ F +G FGQ G+ GR+ PE ++ S V+ +S TA + R
Sbjct: 7 GSWFGFGFCGFGQ-APGSGRGRQVLSPEPLQTPGSGADVRRVSASWSYTALVTRERPPPA 65
Query: 138 TISTS-RLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEY 196
+ R+ Q + P A P ++ G+ H + L E G + +WG +
Sbjct: 66 LLRPGPRVPGAKAPQPALRPPAP-RALAPELRARRLELGAEHALLLDEAGQVFSWGQGRH 124
Query: 197 GQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGS 256
GQLG G + E PR+++ L P + +V+ G +HS VSE G++Y WG
Sbjct: 125 GQLGHG-SLEAEPEPRLLEA----LQGLP----VAEVAAGGWHSVCVSETGDIYIWGWNE 175
Query: 257 VGQLGHCSLQ-SGDKELLPRRVVAL--DGIFIKDVACG 291
GQL S + D + +PR L DG ++ A G
Sbjct: 176 SGQLALPSRSLAEDTKTIPREASGLNEDGFEVRRTAKG 213
Score = 131 (51.2 bits), Expect = 4.4e-13, Sum P(2) = 4.4e-13
Identities = 40/108 (37%), Positives = 57/108 (52%)
Query: 189 QAWGYNEYG-QLGRGITCE-GLQGPRV-IKGYAKFLDEAPELEKITQVSCGEYHSAAVSE 245
+A G NE G ++ R E G P + I+ + LD P + + SCG H+A V+
Sbjct: 196 EASGLNEDGFEVRRTAKGEDGAPAPFIAIQPFPALLD-LPLGADVVKASCGSRHTAVVTG 254
Query: 246 NGEVYTWGLGSVGQLGHCSLQSGDKELLPRRV-VALDG-IFIKDVACG 291
GE+YTWG G GQLGH S D+ P RV +D + ++ V+CG
Sbjct: 255 TGELYTWGWGKYGQLGHKDTTSLDR---PCRVEYFVDKQLQVRAVSCG 299
Score = 124 (48.7 bits), Expect = 1.0e-06, Sum P(2) = 1.0e-06
Identities = 33/89 (37%), Positives = 44/89 (49%)
Query: 51 PELFGCPAGANSRWLDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKV-- 108
P L P GA+ + +CG HTA V G L+TWG ++GQLG P +V
Sbjct: 228 PALLDLPLGADV--VKASCGSRHTAVVTGTGELYTWGWGKYGQLGHKDTTSLDRPCRVEY 285
Query: 109 ---KQLQSEFVKSISCGAHCTAAIAEPRE 134
KQLQ V+++SCG T A +E
Sbjct: 286 FVDKQLQ---VRAVSCGPWNTYVYAVEKE 311
Score = 112 (44.5 bits), Expect = 4.4e-13, Sum P(2) = 4.4e-13
Identities = 34/119 (28%), Positives = 54/119 (45%)
Query: 35 GRKGRERQLR--IPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGTLFTWGANEFG 92
G K + LR P+ L PEL +R L++ G EH + G +F+WG G
Sbjct: 75 GAKAPQPALRPPAPRALAPEL-------RARRLEL--GAEHALLLDEAGQVFSWGQGRHG 125
Query: 93 QLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTSRLWVWGQNQ 151
QLG G+ E P ++ LQ V ++ G + ++E T +++WG N+
Sbjct: 126 QLGHGSLEAEPEPRLLEALQGLPVAEVAAGGWHSVCVSE---------TGDIYIWGWNE 175
Score = 99 (39.9 bits), Expect = 1.5e-09, Sum P(2) = 1.5e-09
Identities = 28/81 (34%), Positives = 45/81 (55%)
Query: 169 ICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELE 228
+ + SCGS H ++ G L WG+ +YGQLG T L P ++ Y F+D+ +L+
Sbjct: 239 VVKASCGSRHTAVVTGTGELYTWGWGKYGQLGHKDTTS-LDRPCRVE-Y--FVDK--QLQ 292
Query: 229 KITQVSCGEYHSA--AVSENG 247
+ VSCG +++ AV + G
Sbjct: 293 -VRAVSCGPWNTYVYAVEKEG 312
Score = 96 (38.9 bits), Expect = 5.5e-19, Sum P(3) = 5.5e-19
Identities = 24/78 (30%), Positives = 41/78 (52%)
Query: 340 ILVVPNGVQLV--ACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG- 396
+L +P G +V +CG HT V G ++ WG+ YGQ ++ +T P V++ V
Sbjct: 230 LLDLPLGADVVKASCGSRHTAVVTGTGELYTWGWGKYGQLGHKDTTSLDRPCRVEYFVDK 289
Query: 397 --EVRKLAAGGGHSAVLA 412
+VR ++ G ++ V A
Sbjct: 290 QLQVRAVSCGPWNTYVYA 307
Score = 89 (36.4 bits), Expect = 1.0e-06, Sum P(2) = 1.0e-06
Identities = 23/72 (31%), Positives = 33/72 (45%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ WG GQ G E + P+ L L G P ++A G H+ V+ G
Sbjct: 116 VFSWGQGRHGQLGHGSLEAEPE-PRLLEA-LQGLPVA------EVAAGGWHSVCVSETGD 167
Query: 83 LFTWGANEFGQL 94
++ WG NE GQL
Sbjct: 168 IYIWGWNESGQL 179
Score = 85 (35.0 bits), Expect = 4.6e-14, Sum P(2) = 4.6e-14
Identities = 26/79 (32%), Positives = 37/79 (46%)
Query: 282 GIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPIL 341
G + +CG H+ +T G LY WG + GQLG T S P + YF + +
Sbjct: 236 GADVVKASCGSRHTAVVTGTGELYTWGWGKYGQLG-HKDTTSLDR-PCRVE-YFVDKQLQ 292
Query: 342 VVPNGVQLVACGHSHTLVY 360
V + V+CG +T VY
Sbjct: 293 V-----RAVSCGPWNTYVY 306
Score = 58 (25.5 bits), Expect = 1.0e-06, Sum P(2) = 1.0e-06
Identities = 13/33 (39%), Positives = 16/33 (48%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFG 55
IY+WG+N SGQ R K +P E G
Sbjct: 168 IYIWGWNESGQLALPSRSLA-EDTKTIPREASG 199
Score = 39 (18.8 bits), Expect = 5.5e-19, Sum P(3) = 5.5e-19
Identities = 17/56 (30%), Positives = 26/56 (46%)
Query: 26 WGYNHSGQTGRKGRERQLRIPKQLPPELFGCP-AGANSRWLDIACGHEHTAAVASD 80
+G+ GQ GR RQ+ L PE P +GA+ R ++ +TA V +
Sbjct: 12 FGFCGFGQAPGSGRGRQV-----LSPEPLQTPGSGADVR--RVSASWSYTALVTRE 60
>TAIR|locus:2156233 [details] [associations]
symbol:RUG2 "RCC1/UVR8/GEF-like 2" species:3702
"Arabidopsis thaliana" [GO:0005794 "Golgi apparatus" evidence=ISM]
[GO:0008150 "biological_process" evidence=ND] INTERPRO:IPR000408
Pfam:PF00415 EMBL:CP002688 GenomeReviews:BA000015_GR
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 eggNOG:COG5184
HSSP:P18754 EMBL:BT005508 EMBL:AK117526 IPI:IPI00527447
RefSeq:NP_199644.2 UniGene:At.29855 ProteinModelPortal:Q8GYL6
SMR:Q8GYL6 PRIDE:Q8GYL6 EnsemblPlants:AT5G48330.1 GeneID:834886
KEGG:ath:AT5G48330 TAIR:At5g48330 HOGENOM:HOG000238877
InParanoid:Q8GYL6 OMA:SAGHYHS PhylomeDB:Q8GYL6
ProtClustDB:CLSN2680477 ArrayExpress:Q8GYL6 Genevestigator:Q8GYL6
Uniprot:Q8GYL6
Length = 455
Score = 229 (85.7 bits), Expect = 2.9e-16, P = 2.9e-16
Identities = 58/185 (31%), Positives = 90/185 (48%)
Query: 197 GQLGR-GITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLG 255
G LG G++ + G + + P I+ +S G YHS AV+ +GE++ WG
Sbjct: 52 GNLGALGLSSSSIPGMGMDAYEPTVVSNLPS--DISSISAGHYHSLAVTSSGEIWAWGRN 109
Query: 256 SVGQLGHCSLQSG-DKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQ 314
GQLG + S D P+RV L+ + ++ GV S A+ G+L+ WG S+ GQ
Sbjct: 110 DEGQLGRIVIDSSRDSRSEPKRVEGLENVNVQAAFASGVVSAAIGDDGSLWVWGRSKRGQ 169
Query: 315 LGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSY 374
LGLG + +P+ + L + V+ V+ G H L DG++ GWGY +
Sbjct: 170 LGLGNGIIE-ARVPSRVEN-------LAAEHVVK-VSLGWGHALALTVDGKVFGWGYVAD 220
Query: 375 GQAAN 379
G+ N
Sbjct: 221 GRVGN 225
Score = 186 (70.5 bits), Expect = 6.5e-19, Sum P(2) = 6.5e-19
Identities = 56/157 (35%), Positives = 74/157 (47%)
Query: 164 TPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDE 223
T N + ++CGS H + L G L + G N YGQLGR G++ P I E
Sbjct: 283 TCNEKVADIACGSDHSLILCHDGTLLSAGSNIYGQLGRSKQDLGMK-PVDIT-------E 334
Query: 224 APELEKITQVSCGEYHSAAVSENGE--VYTWGLGSVGQLGHCSLQSGDKELLPRRVVALD 281
+P ++ G HS A+ GE + +WG QLG G E LPR V D
Sbjct: 335 SP-----ISIAAGLGHSLAICNRGERNILSWGWNRSRQLGR-----GKPENLPREVEGFD 384
Query: 282 GIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLG 318
G V+ G VHS +T KG + WG + G+LGLG
Sbjct: 385 GESPASVSAGRVHSLCVTEKGEAWVWGCGKNGRLGLG 421
Score = 167 (63.8 bits), Expect = 4.5e-15, Sum P(2) = 4.5e-15
Identities = 50/171 (29%), Positives = 81/171 (47%)
Query: 153 SNFPRLFWGAFTPNTI------ICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCE 206
S+ P + A+ P + I +S G H +A++ G + AWG N+ GQLGR +
Sbjct: 62 SSIPGMGMDAYEPTVVSNLPSDISSISAGHYHSLAVTSSGEIWAWGRNDEGQLGRIV--- 118
Query: 207 GLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQ 266
+ R + K ++ + + G SAA+ ++G ++ WG GQLG L
Sbjct: 119 -IDSSRDSRSEPKRVEGLENVNVQAAFASGVV-SAAIGDDGSLWVWGRSKRGQLG---LG 173
Query: 267 SGDKEL-LPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLG 316
+G E +P RV L + V+ G H+ ALT G ++ WG G++G
Sbjct: 174 NGIIEARVPSRVENLAAEHVVKVSLGWGHALALTVDGKVFGWGYVADGRVG 224
Score = 160 (61.4 bits), Expect = 2.8e-14, Sum P(2) = 2.8e-14
Identities = 49/155 (31%), Positives = 79/155 (50%)
Query: 67 IACGHEHTAAVASDGTLFTWGANEFGQLG----DGTEEGRKHPEKVKQLQSEFVKSISCG 122
I+ GH H+ AV S G ++ WG N+ GQLG D + + R P++V+ L++ V++
Sbjct: 87 ISAGHYHSLAVTSSGEIWAWGRNDEGQLGRIVIDSSRDSRSEPKRVEGLENVNVQAAFAS 146
Query: 123 AHCTAAIAEPRENDGTISTSRLWVWGQNQGSNFPRLFWG---AFTPNTI-------ICQV 172
+AAI + DG+ LWVWG+++ L G A P+ + + +V
Sbjct: 147 GVVSAAIGD----DGS-----LWVWGRSKRGQLG-LGNGIIEARVPSRVENLAAEHVVKV 196
Query: 173 SCGSVHVVALSECGLLQAWGYNEYGQLGR-GITCE 206
S G H +AL+ G + WGY G++G G+ E
Sbjct: 197 SLGWGHALALTVDGKVFGWGYVADGRVGNVGLPLE 231
Score = 149 (57.5 bits), Expect = 6.0e-07, Sum P(2) = 6.0e-07
Identities = 45/143 (31%), Positives = 67/143 (46%)
Query: 61 NSRWLDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSIS 120
N + DIACG +H+ + DGTL + G+N +GQLG ++ P + +E SI+
Sbjct: 285 NEKVADIACGSDHSLILCHDGTLLSAGSNIYGQLGRSKQDLGMKPVDI----TESPISIA 340
Query: 121 CG-AHCTAAIAEPRENDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHV 179
G H A N + +R G+ + N PR G F + VS G VH
Sbjct: 341 AGLGHSLAICNRGERNILSWGWNRSRQLGRGKPENLPREVEG-FDGESP-ASVSAGRVHS 398
Query: 180 VALSECGLLQAWGYNEYGQLGRG 202
+ ++E G WG + G+LG G
Sbjct: 399 LCVTEKGEAWVWGCGKNGRLGLG 421
Score = 119 (46.9 bits), Expect = 1.1e-09, Sum P(2) = 1.1e-09
Identities = 55/219 (25%), Positives = 87/219 (39%)
Query: 59 GANSRWLDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKS 118
G R G T DG L G + G G + P V L S+ + S
Sbjct: 30 GVVRRQFTSTSGERRTVMSFGDGNLGALGLSSSSIPGMGMDA--YEPTVVSNLPSD-ISS 86
Query: 119 ISCGAHCTAAIAEPRENDGTISTSRLWVWGQNQGSNFPRLFWGAFTPN-----------T 167
IS G + + A+ S+ +W WG+N R+ + +
Sbjct: 87 ISAGHYHSLAVT---------SSGEIWAWGRNDEGQLGRIVIDSSRDSRSEPKRVEGLEN 137
Query: 168 IICQVSCGS-VHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPE 226
+ Q + S V A+ + G L WG ++ GQLG G G+ RV E
Sbjct: 138 VNVQAAFASGVVSAAIGDDGSLWVWGRSKRGQLGLG---NGIIEARVPSRV-----ENLA 189
Query: 227 LEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSL 265
E + +VS G H+ A++ +G+V+ WG + G++G+ L
Sbjct: 190 AEHVVKVSLGWGHALALTVDGKVFGWGYVADGRVGNVGL 228
Score = 114 (45.2 bits), Expect = 6.5e-19, Sum P(2) = 6.5e-19
Identities = 37/114 (32%), Positives = 55/114 (48%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
+ + I+ WG N GQ GR + R + P + G N + A G +AA
Sbjct: 97 VTSSGEIWAWGRNDEGQLGRIVIDSS-RDSRSEPKRVEGLE-NVNVQ-AAFASGVV-SAA 152
Query: 77 VASDGTLFTWGANEFGQLG--DGTEEGRKHPEKVKQLQSEFVKSISCG-AHCTA 127
+ DG+L+ WG ++ GQLG +G E R P +V+ L +E V +S G H A
Sbjct: 153 IGDDGSLWVWGRSKRGQLGLGNGIIEARV-PSRVENLAAEHVVKVSLGWGHALA 205
Score = 98 (39.6 bits), Expect = 4.5e-15, Sum P(2) = 4.5e-15
Identities = 33/110 (30%), Positives = 45/110 (40%)
Query: 308 GGSQAGQLGL-GPQTRSFSLIPNESDTYFRNIPILVVPN---GVQLVACGHSHTLVYMRD 363
G AG L L + + + E+D P LV V +ACG H+L+ D
Sbjct: 245 GHHAAGDLNLEAAEKKVVEAMSKENDMPIAWEPCLVEETCNEKVADIACGSDHSLILCHD 304
Query: 364 GRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLAD 413
G + G N YGQ K PVD + +AAG GHS + +
Sbjct: 305 GTLLSAGSNIYGQLGRSKQDLGM--KPVDITESPI-SIAAGLGHSLAICN 351
Score = 87 (35.7 bits), Expect = 3.9e-13, Sum P(2) = 3.9e-13
Identities = 36/130 (27%), Positives = 52/130 (40%)
Query: 285 IKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVP 344
+ D+ACG HS L G L + G + GQLG RS + D + + I P
Sbjct: 288 VADIACGSDHSLILCHDGTLLSAGSNIYGQLG-----RS------KQDLGMKPVDITESP 336
Query: 345 NGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEV-RKLAA 403
+ GHS + + I WG+N Q K P V+ GE ++A
Sbjct: 337 ISIA-AGLGHSLAICNRGERNILSWGWNRSRQLGRGKPENL--PREVEGFDGESPASVSA 393
Query: 404 GGGHSAVLAD 413
G HS + +
Sbjct: 394 GRVHSLCVTE 403
Score = 82 (33.9 bits), Expect = 1.3e-12, Sum P(2) = 1.3e-12
Identities = 33/127 (25%), Positives = 54/127 (42%)
Query: 288 VACGGVHSCALTSKGA--LYAWGGSQAGQLGLG-PQTRSFSLIPNESDTYFRNIPILVVP 344
+A G HS A+ ++G + +WG +++ QLG G P+ +P E + + P V
Sbjct: 339 IAAGLGHSLAICNRGERNILSWGWNRSRQLGRGKPEN-----LPREVEGFDGESPASV-- 391
Query: 345 NGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAG 404
+ G H+L G WG G+ S+ P ++ G V + AG
Sbjct: 392 ------SAGRVHSLCVTEKGEAWVWGCGKNGRLGLGSSSDEPEPMLLEDVEGCVLQAVAG 445
Query: 405 GGHSAVL 411
HS +L
Sbjct: 446 FDHSLIL 452
Score = 39 (18.8 bits), Expect = 4.0e-11, Sum P(2) = 4.0e-11
Identities = 6/16 (37%), Positives = 9/16 (56%)
Query: 23 IYVWGYNHSGQTGRKG 38
++ WGY G+ G G
Sbjct: 212 VFGWGYVADGRVGNVG 227
>TAIR|locus:2092190 [details] [associations]
symbol:AT3G26100 species:3702 "Arabidopsis thaliana"
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] [GO:0008536 "Ran GTPase binding"
evidence=ISS] INTERPRO:IPR000408 Pfam:PF00415 EMBL:CP002686
EMBL:AB023041 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 HSSP:P18754
EMBL:AK230272 IPI:IPI00540426 RefSeq:NP_974362.1 UniGene:At.25510
UniGene:At.69016 ProteinModelPortal:Q9LU80 SMR:Q9LU80 STRING:Q9LU80
PRIDE:Q9LU80 EnsemblPlants:AT3G26100.2 GeneID:822208
KEGG:ath:AT3G26100 TAIR:At3g26100 HOGENOM:HOG000070923
InParanoid:Q9LU80 OMA:LACQPNG PhylomeDB:Q9LU80
ProtClustDB:CLSN2688790 Genevestigator:Q9LU80 Uniprot:Q9LU80
Length = 532
Score = 254 (94.5 bits), Expect = 6.6e-19, P = 6.6e-19
Identities = 101/384 (26%), Positives = 174/384 (45%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
+ +K +Y +GYN+SGQ G E + RI Q L G R + A G T
Sbjct: 158 VTSKGEVYTFGYNNSGQLGHGHTEDEARI--QPVRSLQGV------RIIQAAAGAARTML 209
Query: 77 VASDGTLFTWGANEFGQL---GDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPR 133
++ DG ++ G FG+ G GT+ P+ V L++ FV + G + TA ++ R
Sbjct: 210 ISDDGKVYACGKESFGEAEYGGQGTKPVTT-PQLVTSLKNIFVVQAAIGNYFTAVLS--R 266
Query: 134 ENDGTISTSRLWVWG-------QNQGSNF-PRLFWGAFTPNTIICQVSCGSVHVVALSEC 185
E G + T + WG Q + ++ PR G N + Q++ G +++AL+ C
Sbjct: 267 E--GKVYT---FSWGNDGRLGHQTEAADVEPRPLLGPLE-NVPVVQIAAGYCYLLALA-C 319
Query: 186 ---GL-LQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSA 241
G+ + + G G+LG G + + PRVI+ + + L+ P + V+ G +H+A
Sbjct: 320 QPNGMSVYSVGCGLGGKLGHGSRTDE-KYPRVIEQF-QILNLQPRV-----VAAGAWHAA 372
Query: 242 AVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSK 301
V ++G V TWG G G LGH + + E +P+ V L + VA G + ++
Sbjct: 373 VVGQDGRVCTWGWGRYGCLGHGNEEC---ESVPKVVEGLSHVKAVHVATGDYTTFVVSDD 429
Query: 302 GALYAWGGSQAGQLGLGPQ-----TRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSH 356
G +Y++G ++ LG P R +++ T + + +V + ++H
Sbjct: 430 GDVYSFGCGESASLGHHPSFDEQGNRHANVLSPTVVTSLKQVNERMVQISLTNSIYWNAH 489
Query: 357 TLVYMRDGRIHGWGYNSYGQAANE 380
T G++ +G GQ E
Sbjct: 490 TFALTESGKLFAFGAGDQGQLGTE 513
Score = 202 (76.2 bits), Expect = 4.6e-13, P = 4.6e-13
Identities = 79/288 (27%), Positives = 131/288 (45%)
Query: 68 ACGHEHTAAVASDGTLFT--WGANEFGQLGDGTEEGRKHPEKVK-QLQSEFVKSISCGAH 124
A G+ TA ++ +G ++T WG N+ G+LG TE P + L++ V I+ G +
Sbjct: 255 AIGNYFTAVLSREGKVYTFSWG-ND-GRLGHQTEAADVEPRPLLGPLENVPVVQIAAG-Y 311
Query: 125 CTAAIAEPRENDGTISTSRLWVWGQ-NQGSN----FPRLFWGAFTPNTIICQVSCGSVHV 179
C + N ++ + + G+ GS +PR+ N V+ G+ H
Sbjct: 312 CYLLALACQPNGMSVYSVGCGLGGKLGHGSRTDEKYPRVIEQFQILNLQPRVVAAGAWHA 371
Query: 180 VALSECGLLQAWGYNEYGQLGRGIT-CEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEY 238
+ + G + WG+ YG LG G CE + P+V++G + K V+ G+Y
Sbjct: 372 AVVGQDGRVCTWGWGRYGCLGHGNEECESV--PKVVEGLSHV--------KAVHVATGDY 421
Query: 239 HSAAVSENGEVYTWGLGSVGQLGHCSL--QSGDKE---LLPRRVVALDGIFIKDVACG-- 291
+ VS++G+VY++G G LGH + G++ L P V +L + + V
Sbjct: 422 TTFVVSDDGDVYSFGCGESASLGHHPSFDEQGNRHANVLSPTVVTSLKQVNERMVQISLT 481
Query: 292 -----GVHSCALTSKGALYAWGGSQAGQLG--LGPQTRSFSLIPNESD 332
H+ ALT G L+A+G GQLG LG + +P + D
Sbjct: 482 NSIYWNAHTFALTESGKLFAFGAGDQGQLGTELGKNQKE-RCVPEKVD 528
Score = 182 (69.1 bits), Expect = 7.5e-11, P = 7.5e-11
Identities = 82/313 (26%), Positives = 135/313 (43%)
Query: 70 GHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAI 129
G H+ AV S G ++T+G N GQLG G E + V+ LQ + + GA T I
Sbjct: 151 GPGHSVAVTSKGEVYTFGYNNSGQLGHGHTEDEARIQPVRSLQGVRIIQAAAGAARTMLI 210
Query: 130 AEPRENDGTISTSRLWVWGQ----NQGSN---FPRLFWGAFTPNTIICQVSCGSVHVVAL 182
++ DG + +G+ QG+ P+L N + Q + G+ L
Sbjct: 211 SD----DGKVYACGKESFGEAEYGGQGTKPVTTPQLVTSL--KNIFVVQAAIGNYFTAVL 264
Query: 183 SECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAA 242
S G + + + G+LG ++ PR + G L+ P + Q++ G + A
Sbjct: 265 SREGKVYTFSWGNDGRLGHQTEAADVE-PRPLLGP---LENVP----VVQIAAGYCYLLA 316
Query: 243 VS--ENG-EVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKD--VACGGVHSCA 297
++ NG VY+ G G G+LGH S ++ +K PR + + ++ VA G H+
Sbjct: 317 LACQPNGMSVYSVGCGLGGKLGHGS-RTDEK--YPRVIEQFQILNLQPRVVAAGAWHAAV 373
Query: 298 LTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHT 357
+ G + WG + G LG G + E ++ + + L V VA G T
Sbjct: 374 VGQDGRVCTWGWGRYGCLGHGNE---------ECESVPKVVEGLSHVKAVH-VATGDYTT 423
Query: 358 LVYMRDGRIHGWG 370
V DG ++ +G
Sbjct: 424 FVVSDDGDVYSFG 436
Score = 165 (63.1 bits), Expect = 5.6e-09, P = 5.6e-09
Identities = 54/188 (28%), Positives = 87/188 (46%)
Query: 228 EKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKD 287
EK +Q G HS AV+ GEVYT+G + GQLGH + + + P R +L G+ I
Sbjct: 144 EK-SQAVAGPGHSVAVTSKGEVYTFGYNNSGQLGHGHTED-EARIQPVR--SLQGVRIIQ 199
Query: 288 VACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGV 347
A G + ++ G +YA G G+ G Q P + T +NI + V
Sbjct: 200 AAAGAARTMLISDDGKVYACGKESFGEAEYGGQGTKPVTTP-QLVTSLKNIFV------V 252
Query: 348 QLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGH 407
Q A G+ T V R+G+++ + + + G+ ++ P P+ + V + G+
Sbjct: 253 Q-AAIGNYFTAVLSREGKVYTFSWGNDGRLGHQTEAADVEPRPLLGPLENVPVVQIAAGY 311
Query: 408 SAVLADAC 415
+LA AC
Sbjct: 312 CYLLALAC 319
Score = 165 (63.1 bits), Expect = 5.6e-09, P = 5.6e-09
Identities = 67/250 (26%), Positives = 113/250 (45%)
Query: 171 QVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEG--LQGPRVIKGYAKFLDEAPELE 228
Q G H VA++ G + +GYN GQLG G T + +Q R ++G
Sbjct: 147 QAVAGPGHSVAVTSKGEVYTFGYNNSGQLGHGHTEDEARIQPVRSLQGV----------- 195
Query: 229 KITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELL-PRRVVALDGIFIKD 287
+I Q + G + +S++G+VY G S G+ + G K + P+ V +L IF+
Sbjct: 196 RIIQAAAGAARTMLISDDGKVYACGKESFGEAEYGG--QGTKPVTTPQLVTSLKNIFVVQ 253
Query: 288 VACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNG- 346
A G + L+ +G +Y + G+LG QT + + P N+P++ + G
Sbjct: 254 AAIGNYFTAVLSREGKVYTFSWGNDGRLG--HQTEAADVEPRPLLGPLENVPVVQIAAGY 311
Query: 347 --VQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDW--CVG-EVRKL 401
+ +AC + VY + G G +G +EK YP ++ + + R +
Sbjct: 312 CYLLALACQPNGMSVYSVGCGL-G-GKLGHGSRTDEK-----YPRVIEQFQILNLQPRVV 364
Query: 402 AAGGGHSAVL 411
AAG H+AV+
Sbjct: 365 AAGAWHAAVV 374
>MGI|MGI:2444156 [details] [associations]
symbol:Rccd1 "RCC1 domain containing 1" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
"biological_process" evidence=ND] MGI:MGI:2444156
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005886 GO:GO:0005737
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
eggNOG:COG5184 CTD:91433 HOGENOM:HOG000154085 HOVERGEN:HBG061852
OMA:ERPGAWF OrthoDB:EOG41NTMF EMBL:AK030872 EMBL:AK084219
EMBL:AK088662 EMBL:BC069844 IPI:IPI00881984 IPI:IPI00896067
RefSeq:NP_775621.2 UniGene:Mm.474502 ProteinModelPortal:Q8BTU7
SMR:Q8BTU7 PhosphoSite:Q8BTU7 PRIDE:Q8BTU7
Ensembl:ENSMUST00000047362 Ensembl:ENSMUST00000121882 GeneID:269955
KEGG:mmu:269955 UCSC:uc009ial.2 GeneTree:ENSGT00700000104312
InParanoid:Q8BTU7 NextBio:393123 Bgee:Q8BTU7 Genevestigator:Q8BTU7
Uniprot:Q8BTU7
Length = 377
Score = 191 (72.3 bits), Expect = 1.2e-18, Sum P(2) = 1.2e-18
Identities = 44/100 (44%), Positives = 62/100 (62%)
Query: 224 APELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGI 283
APEL ++ Q+ G H + G+V++WG G GQLGH +L++ EL PR + AL G+
Sbjct: 158 APEL-RVRQLELGAEHVLLLCAAGQVFSWGAGRHGQLGHGTLEA---ELEPRLLEALQGL 213
Query: 284 FIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRS 323
+ VA GG HS L+ G +Y WG +++GQL L P TRS
Sbjct: 214 RMAKVAAGGWHSVCLSETGDIYIWGWNESGQLAL-P-TRS 251
Score = 149 (57.5 bits), Expect = 9.2e-14, Sum P(2) = 9.2e-14
Identities = 53/188 (28%), Positives = 82/188 (43%)
Query: 78 ASDGTLFTWGANEFGQL-----GDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEP 132
A+DG W + E L G TE P Q + +V+++ GA
Sbjct: 70 AADGCRDVWASEELLVLLRNKGGSSTEVQAWVPGSALQGEPLWVQNLVSGAKGQGEDEPS 129
Query: 133 RENDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWG 192
RE+ + T L + + P F P + Q+ G+ HV+ L G + +WG
Sbjct: 130 RES--RMGTLPLLPCARAYVTPEPP-FCQPLAPELRVRQLELGAEHVLLLCAAGQVFSWG 186
Query: 193 YNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTW 252
+GQLG G T E PR++ EA + ++ +V+ G +HS +SE G++Y W
Sbjct: 187 AGRHGQLGHG-TLEAELEPRLL--------EALQGLRMAKVAAGGWHSVCLSETGDIYIW 237
Query: 253 GLGSVGQL 260
G GQL
Sbjct: 238 GWNESGQL 245
Score = 117 (46.2 bits), Expect = 1.4e-11, Sum P(2) = 1.4e-11
Identities = 28/78 (35%), Positives = 37/78 (47%)
Query: 214 IKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELL 273
I+ + LD P SCG H+A V+ GE+YTWG G GQLGH S D+
Sbjct: 288 IQPFPALLD-LPLGSDAVMASCGSRHTAVVTRTGELYTWGWGKYGQLGHKDSTSLDRPCC 346
Query: 274 PRRVVALDGIFIKDVACG 291
V + ++ V CG
Sbjct: 347 VEYFVERQ-LEVRAVTCG 363
Score = 116 (45.9 bits), Expect = 1.4e-11, Sum P(2) = 1.4e-11
Identities = 29/102 (28%), Positives = 46/102 (45%)
Query: 50 PPELFGCPAGANSRWLDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVK 109
PP F P R + G EH + + G +F+WGA GQLG GT E P ++
Sbjct: 151 PP--FCQPLAPELRVRQLELGAEHVLLLCAAGQVFSWGAGRHGQLGHGTLEAELEPRLLE 208
Query: 110 QLQSEFVKSISCGAHCTAAIAEPRENDGTISTSRLWVWGQNQ 151
LQ + ++ G + ++E T +++WG N+
Sbjct: 209 ALQGLRMAKVAAGGWHSVCLSE---------TGDIYIWGWNE 241
Score = 102 (41.0 bits), Expect = 1.2e-18, Sum P(2) = 1.2e-18
Identities = 27/78 (34%), Positives = 40/78 (51%)
Query: 340 ILVVPNGVQLV--ACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG- 396
+L +P G V +CG HT V R G ++ WG+ YGQ ++ ST P V++ V
Sbjct: 294 LLDLPLGSDAVMASCGSRHTAVVTRTGELYTWGWGKYGQLGHKDSTSLDRPCCVEYFVER 353
Query: 397 --EVRKLAAGGGHSAVLA 412
EVR + G ++ V A
Sbjct: 354 QLEVRAVTCGPWNTYVYA 371
Score = 95 (38.5 bits), Expect = 9.5e-08, Sum P(2) = 9.5e-08
Identities = 28/102 (27%), Positives = 43/102 (42%)
Query: 19 AKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVA 78
A ++ WG GQ G E +L P L G R +A G H+ ++
Sbjct: 178 AAGQVFSWGAGRHGQLGHGTLEAELE------PRLLEALQGL--RMAKVAAGGWHSVCLS 229
Query: 79 SDGTLFTWGANEFGQLGDGTEEGRKHP---EKVKQLQSEFVK 117
G ++ WG NE GQL T G ++ E+ +L + +K
Sbjct: 230 ETGDIYIWGWNESGQLALPTRSGTENKAEREEATELNEDGLK 271
Score = 89 (36.4 bits), Expect = 1.1e-08, Sum P(2) = 1.1e-08
Identities = 23/68 (33%), Positives = 38/68 (55%)
Query: 173 SCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQ 232
SCGS H ++ G L WG+ +YGQLG + L P ++ Y F++ +LE +
Sbjct: 307 SCGSRHTAVVTRTGELYTWGWGKYGQLGHKDSTS-LDRPCCVE-Y--FVER--QLE-VRA 359
Query: 233 VSCGEYHS 240
V+CG +++
Sbjct: 360 VTCGPWNT 367
Score = 78 (32.5 bits), Expect = 2.8e-11, Sum P(2) = 2.8e-11
Identities = 25/72 (34%), Positives = 32/72 (44%)
Query: 289 ACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQ 348
+CG H+ +T G LY WG + GQLG T SL YF + V+
Sbjct: 307 SCGSRHTAVVTRTGELYTWGWGKYGQLGHKDST---SLDRPCCVEYFVERQL-----EVR 358
Query: 349 LVACGHSHTLVY 360
V CG +T VY
Sbjct: 359 AVTCGPWNTYVY 370
>DICTYBASE|DDB_G0278255 [details] [associations]
symbol:DDB_G0278255 "regulator of chromosome
condensation (RCC1) domain-containing protein" species:44689
"Dictyostelium discoideum" [GO:0044351 "macropinocytosis"
evidence=RCA] dictyBase:DDB_G0278255 INTERPRO:IPR000408
Pfam:PF00415 EMBL:AAFI02000023 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 eggNOG:COG5184 RefSeq:XP_642243.1
ProteinModelPortal:Q54YF9 PRIDE:Q54YF9 EnsemblProtists:DDB0235387
GeneID:8621452 KEGG:ddi:DDB_G0278255 InParanoid:Q54YF9 OMA:DIACGGY
Uniprot:Q54YF9
Length = 514
Score = 222 (83.2 bits), Expect = 1.2e-18, Sum P(2) = 1.2e-18
Identities = 62/216 (28%), Positives = 106/216 (49%)
Query: 171 QVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITC---EGLQGPRVIKGYAKFLDEAPEL 227
++ GS H + L G L +WG +G LG G+ E + P+ I + +E+
Sbjct: 249 KICSGSDHNLLLGNDGSLYSWGNGYFGALGHGVGSNDKENIYTPKKITTFTLNNNES--- 305
Query: 228 EKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALD----GI 283
+I ++CG YHS ++ + E+YT+G G GQLGH + + +P+R+ + G
Sbjct: 306 -RIVDIACGGYHSMFLTNDNEIYTFGYGEFGQLGHGENDTLN-HYIPKRIKSTGDNAAGN 363
Query: 284 FIKDVACGG-VHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILV 342
IK + G +S +T+ G++Y+WG + G LG G +S P + I L
Sbjct: 364 KIKSIFAGDHANSFYITTDGSVYSWGWNDGGSLGHGTNENHYS--P-------KKIQSL- 413
Query: 343 VPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAA 378
+ ++ + G HTL + I+ +G N++GQ A
Sbjct: 414 --SNIKKITSGFKHTLAQSINNDIYVFGDNTFGQTA 447
Score = 222 (83.2 bits), Expect = 2.5e-15, P = 2.5e-15
Identities = 87/367 (23%), Positives = 153/367 (41%)
Query: 66 DIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHC 125
DI H+ + + + WG + L TE P K+K + + ++S G +
Sbjct: 76 DIFANAYHSGIINENDEFYHWGL--YSNLV--TEV----PNKIKINNDKKISNVSLGGNF 127
Query: 126 TAAIAEPRENDGTISTSRLWVWG--------QNQGSNFPRLFW-GAFTPNTIICQVSCGS 176
+ +I S+ V G + +N +++ F N II VS G
Sbjct: 128 IILQTKDDNQLYSIGKSKYGVLGIGRSIDDDDDNNNNNEKVYKIEKFNDN-IISIVS-GY 185
Query: 177 VHVVALSECGLLQAWGYNEYGQLGRGITCEGLQG----PRVIKGYAK---FLDEA-PELE 228
H + +++ + WG N QLG + P + Y+K L E P +
Sbjct: 186 EHSLVVTKDDGIYGWGRNHKNQLGGRERVKDKSSSPSSPSEDEYYSKPIKVLKETDPIFK 245
Query: 229 KITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELL--PRRVVAL----DG 282
++ G H+ + +G +Y+WG G G LGH + S DKE + P+++ +
Sbjct: 246 DFKKICSGSDHNLLLGNDGSLYSWGNGYFGALGH-GVGSNDKENIYTPKKITTFTLNNNE 304
Query: 283 IFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILV 342
I D+ACGG HS LT+ +Y +G + GQLG G IP + N
Sbjct: 305 SRIVDIACGGYHSMFLTNDNEIYTFGYGEFGQLGHGENDTLNHYIPKRIKSTGDN----A 360
Query: 343 VPNGVQLVACG-HSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKL 401
N ++ + G H+++ DG ++ WG+N G + + + P + + ++K+
Sbjct: 361 AGNKIKSIFAGDHANSFYITTDGSVYSWGWNDGGSLGHGTNENHYSPKKIQ-SLSNIKKI 419
Query: 402 AAGGGHS 408
+G H+
Sbjct: 420 TSGFKHT 426
Score = 159 (61.0 bits), Expect = 2.4e-08, P = 2.4e-08
Identities = 69/265 (26%), Positives = 106/265 (40%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPE--LFGCPAGANSR----WLD---IACGHEH 73
IY WG NH Q G + R + P E + P + D I G +H
Sbjct: 197 IYGWGRNHKNQLGGRERVKDKSSSPSSPSEDEYYSKPIKVLKETDPIFKDFKKICSGSDH 256
Query: 74 TAAVASDGTLFTWGANEFGQLGDGTEEGRKH----PEKVKQL-----QSEFVKSISCGAH 124
+ +DG+L++WG FG LG G K P+K+ +S V I+CG +
Sbjct: 257 NLLLGNDGSLYSWGNGYFGALGHGVGSNDKENIYTPKKITTFTLNNNESRIV-DIACGGY 315
Query: 125 CTAAIAEPRENDGTISTSRLWVWGQ-NQGSN------FPRLF--WGAFTPNTIICQVSCG 175
+ + ND I T +GQ G N P+ G I + G
Sbjct: 316 HSMFLT----NDNEIYTFGYGEFGQLGHGENDTLNHYIPKRIKSTGDNAAGNKIKSIFAG 371
Query: 176 S-VHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVS 234
+ ++ G + +WG+N+ G LG G T E P+ I+ L I +++
Sbjct: 372 DHANSFYITTDGSVYSWGWNDGGSLGHG-TNENHYSPKKIQS----------LSNIKKIT 420
Query: 235 CGEYHSAAVSENGEVYTWGLGSVGQ 259
G H+ A S N ++Y +G + GQ
Sbjct: 421 SGFKHTLAQSINNDIYVFGDNTFGQ 445
Score = 150 (57.9 bits), Expect = 2.4e-07, P = 2.4e-07
Identities = 50/192 (26%), Positives = 83/192 (43%)
Query: 22 AIYVWGYNHSGQTGR---KGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVA 78
++Y WG + G G + + PK++ SR +DIACG H+ +
Sbjct: 265 SLYSWGNGYFGALGHGVGSNDKENIYTPKKITTFTLN---NNESRIVDIACGGYHSMFLT 321
Query: 79 SDGTLFTWGANEFGQLGDGTEEGRKH--PEKVKQLQSEF----VKSISCGAHCTAAIAEP 132
+D ++T+G EFGQLG G + H P+++K +KSI G H +
Sbjct: 322 NDNEIYTFGYGEFGQLGHGENDTLNHYIPKRIKSTGDNAAGNKIKSIFAGDHANSFYIT- 380
Query: 133 RENDGTISTSRLWVWGQNQGSNFPR-LFWGAFTPNTI-----ICQVSCGSVHVVALSECG 186
DG++ + WG N G + ++P I I +++ G H +A S
Sbjct: 381 --TDGSV-----YSWGWNDGGSLGHGTNENHYSPKKIQSLSNIKKITSGFKHTLAQSINN 433
Query: 187 LLQAWGYNEYGQ 198
+ +G N +GQ
Sbjct: 434 DIYVFGDNTFGQ 445
Score = 122 (48.0 bits), Expect = 0.00028, P = 0.00028
Identities = 46/154 (29%), Positives = 73/154 (47%)
Query: 229 KITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDV 288
K + YHS ++EN E Y WGL S +L + +P ++ + I +V
Sbjct: 73 KAKDIFANAYHSGIINENDEFYHWGLYS-------NLVTE----VPNKIKINNDKKISNV 121
Query: 289 ACGGVHSCALTSK--GALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVP-- 344
+ GG + L +K LY+ G S+ G LG+G RS I ++ D N + +
Sbjct: 122 SLGG-NFIILQTKDDNQLYSIGKSKYGVLGIG---RS---IDDDDDNNNNNEKVYKIEKF 174
Query: 345 --NGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQ 376
N + +V+ G+ H+LV +D I+GWG N Q
Sbjct: 175 NDNIISIVS-GYEHSLVVTKDDGIYGWGRNHKNQ 207
Score = 74 (31.1 bits), Expect = 1.2e-18, Sum P(2) = 1.2e-18
Identities = 15/39 (38%), Positives = 20/39 (51%)
Query: 61 NSRWLDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTE 99
N + I G+EH+ V D ++ WG N QLG G E
Sbjct: 175 NDNIISIVSGYEHSLVVTKDDGIYGWGRNHKNQLG-GRE 212
>UNIPROTKB|F1NXI5 [details] [associations]
symbol:SERGEF "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005730 "nucleolus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0045111 "intermediate filament
cytoskeleton" evidence=IEA] [GO:0050709 "negative regulation of
protein secretion" evidence=IEA] InterPro:IPR027048
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005730 GO:GO:0045111
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 GO:GO:0050709
GeneTree:ENSGT00700000104160 PANTHER:PTHR22870:SF7
EMBL:AADN02030419 EMBL:AADN02030421 EMBL:AADN02030420
IPI:IPI00682810 Ensembl:ENSGALT00000010072 OMA:PIELDIT
Uniprot:F1NXI5
Length = 382
Score = 246 (91.7 bits), Expect = 1.3e-18, P = 1.3e-18
Identities = 110/382 (28%), Positives = 162/382 (42%)
Query: 2 DINEIIGETARPVDNIPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGAN 61
DI I G I ++V G+N +GQ G E L C A +
Sbjct: 31 DIKSIAGGGGHSAV-ITGAGELFVCGHNKAGQLGLNHTEDVLCFTL--------CTALSG 81
Query: 62 SRWLDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGR-KHPEKVKQLQSEFVKSIS 120
++ACG + T + G + + G+N FGQLG G P+K+K L+ + V I+
Sbjct: 82 FCVQEVACGWDFTIILGRAGLVLSCGSNAFGQLGVPQISGPCLIPQKIKSLKEKAV-GIA 140
Query: 121 CGA-HCTAAIAEPREND-GTISTSRLWVWGQNQGSNFPRLFWGAF-------TPNTIICQ 171
G H AA GT SR +QG P +FW A P ++CQ
Sbjct: 141 AGLRHALAATESGLVFQWGTGMASR--AKRVHQGKTLP-VFWAAKEPCEIKGNPGVLLCQ 197
Query: 172 VSCGSVHVVALSECGL--LQAWGYNEYGQLGRGITCEG-LQGPRVIKGYAKFLDEAPELE 228
VS S ++ +LS G L WG N++GQL ++ E L P+ I +F E
Sbjct: 198 VSL-SAYLTSLSTAGEGHLYVWGSNKHGQL---VSKEVFLVEPKKID--TQFFSH----E 247
Query: 229 KITQVSCGEYHSAAVSENGEVYTWGLGSVGQLG-HCSLQSGDKEL--------LPRRVVA 279
KI V G H A +E G+V+TWG GQLG H ++ D+ + P+
Sbjct: 248 KIGAVWSGWTHLVAQTETGKVFTWGRADYGQLGRHAAVYVADRVIKLDSFLPCCPQPEAE 307
Query: 280 LDG---IFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFR 336
+G I + +ACG H+ A+ L +WG ++ G G G + P ++ Y +
Sbjct: 308 KNGNHTILLFQIACGSEHNLAVVGDCCL-SWGWNEHGMCGDGTEANVHVPKPVKALGYAK 366
Query: 337 NIPILVVPNGVQLVACGHSHTL 358
I L+ CG H+L
Sbjct: 367 QI----------LIGCGAGHSL 378
Score = 203 (76.5 bits), Expect = 1.5e-13, P = 1.5e-13
Identities = 84/314 (26%), Positives = 128/314 (40%)
Query: 87 GANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIS-TSRLW 145
GAN +GQLG G H E V L + +K +SC +IA + I+ L+
Sbjct: 1 GANSYGQLGLG------HKEDV--LVPQLLKDVSCKCQDIKSIAGGGGHSAVITGAGELF 52
Query: 146 VWGQNQ----GSNFPR--LFWGAFTPNTIIC--QVSCGSVHVVALSECGLLQAWGYNEYG 197
V G N+ G N L + T + C +V+CG + L GL+ + G N +G
Sbjct: 53 VCGHNKAGQLGLNHTEDVLCFTLCTALSGFCVQEVACGWDFTIILGRAGLVLSCGSNAFG 112
Query: 198 QLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSV 257
QLG + GP +I K L E K ++ G H+ A +E+G V+ WG G
Sbjct: 113 QLG----VPQISGPCLIPQKIKSLKE-----KAVGIAAGLRHALAATESGLVFQWGTGMA 163
Query: 258 GQLGHCSLQS------GDKELLPRRVVALDGIFIKDVACGG-VHSCALTSKGALYAWGGS 310
+ KE P + G+ + V+ + S + +G LY WG +
Sbjct: 164 SRAKRVHQGKTLPVFWAAKE--PCEIKGNPGVLLCQVSLSAYLTSLSTAGEGHLYVWGSN 221
Query: 311 QAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWG 370
+ GQL F + P + DT F + + V G +H + G++ WG
Sbjct: 222 KHGQL---VSKEVFLVEPKKIDTQFFS------HEKIGAVWSGWTHLVAQTETGKVFTWG 272
Query: 371 YNSYGQAANEKSTY 384
YGQ + Y
Sbjct: 273 RADYGQLGRHAAVY 286
Score = 170 (64.9 bits), Expect = 7.9e-10, P = 7.9e-10
Identities = 62/215 (28%), Positives = 94/215 (43%)
Query: 192 GYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYT 251
G N YGQLG G E + P+++K D + + + I ++ G HSA ++ GE++
Sbjct: 1 GANSYGQLGLGHK-EDVLVPQLLK------DVSCKCQDIKSIAGGGGHSAVITGAGELFV 53
Query: 252 WGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQ 311
G GQLG L + L AL G +++VACG + L G + + G +
Sbjct: 54 CGHNKAGQLG---LNHTEDVLCFTLCTALSGFCVQEVACGWDFTIILGRAGLVLSCGSNA 110
Query: 312 AGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGY 371
GQLG+ PQ LIP + +++ V G+ A G H L G + WG
Sbjct: 111 FGQLGV-PQISGPCLIPQK----IKSLKEKAV--GI---AAGLRHALAATESGLVFQWGT 160
Query: 372 NSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGG 406
G A+ K + PV W E ++ G
Sbjct: 161 ---GMASRAKRVHQGKTLPVFWAAKEPCEIKGNPG 192
Score = 152 (58.6 bits), Expect = 8.2e-08, P = 8.2e-08
Identities = 69/253 (27%), Positives = 98/253 (38%)
Query: 67 IACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCT 126
IA G H A G +F WG +G+ P + +K C
Sbjct: 139 IAAGLRHALAATESGLVFQWGTG-MASRAKRVHQGKTLPVFWAAKEPCEIKGNPGVLLCQ 197
Query: 127 AAIAEPRENDGTISTSRLWVWGQNQGSNF---------PRLFWGAFTPNTIICQVSCGSV 177
+++ + T L+VWG N+ P+ F + I V G
Sbjct: 198 VSLSAYLTSLSTAGEGHLYVWGSNKHGQLVSKEVFLVEPKKIDTQFFSHEKIGAVWSGWT 257
Query: 178 HVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLD--EAPELEK------ 229
H+VA +E G + WG +YGQLGR RVIK FL PE EK
Sbjct: 258 HLVAQTETGKVFTWGRADYGQLGRHAAV--YVADRVIK-LDSFLPCCPQPEAEKNGNHTI 314
Query: 230 -ITQVSCGEYHSAAVSENGEV-YTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKD 287
+ Q++CG H+ AV G+ +WG G G + + +P+ V AL + K
Sbjct: 315 LLFQIACGSEHNLAVV--GDCCLSWGWNEHGMCGDGTEANVH---VPKPVKALG--YAKQ 367
Query: 288 V--ACGGVHSCAL 298
+ CG HS AL
Sbjct: 368 ILIGCGAGHSLAL 380
Score = 138 (53.6 bits), Expect = 3.0e-06, P = 3.0e-06
Identities = 41/116 (35%), Positives = 55/116 (47%)
Query: 23 IYVWGYNHSGQTGRKGR----ERQLRIPKQLP--PELFGCPAGANSRWL-DIACGHEHTA 75
++ WG GQ GR +R +++ LP P+ G ++ L IACG EH
Sbjct: 268 VFTWGRADYGQLGRHAAVYVADRVIKLDSFLPCCPQPEAEKNGNHTILLFQIACGSEHNL 327
Query: 76 AVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAE 131
AV D L +WG NE G GDGTE P+ VK L I CGA + A+ +
Sbjct: 328 AVVGDCCL-SWGWNEHGMCGDGTEANVHVPKPVKALGYAKQILIGCGAGHSLALCQ 382
>UNIPROTKB|Q9P258 [details] [associations]
symbol:RCC2 "Protein RCC2" species:9606 "Homo sapiens"
[GO:0005874 "microtubule" evidence=IEA] [GO:0051301 "cell division"
evidence=IEA] [GO:0000775 "chromosome, centromeric region"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0005819
"spindle" evidence=IEA] [GO:0000087 "M phase of mitotic cell cycle"
evidence=TAS] [GO:0000236 "mitotic prometaphase" evidence=TAS]
[GO:0000278 "mitotic cell cycle" evidence=TAS] [GO:0005829
"cytosol" evidence=TAS] INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005829 Reactome:REACT_115566 Reactome:REACT_21300
GO:GO:0000775 GO:GO:0005730 GO:GO:0051301 GO:GO:0005819
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0005874
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
eggNOG:COG5184 GO:GO:0000236 CTD:55920 HOGENOM:HOG000232061
HOVERGEN:HBG080538 OMA:FGENKLG OrthoDB:EOG4DNF4B EMBL:AJ421269
EMBL:AB040903 EMBL:BC004933 EMBL:BC042141 EMBL:BC053908
EMBL:AL359612 IPI:IPI00465044 PIR:T50630 RefSeq:NP_001129676.1
RefSeq:NP_061185.1 UniGene:Hs.380857 ProteinModelPortal:Q9P258
SMR:Q9P258 IntAct:Q9P258 STRING:Q9P258 PhosphoSite:Q9P258
DMDM:71152033 SWISS-2DPAGE:Q9P258 PaxDb:Q9P258 PeptideAtlas:Q9P258
PRIDE:Q9P258 Ensembl:ENST00000375433 Ensembl:ENST00000375436
GeneID:55920 KEGG:hsa:55920 UCSC:uc001bal.3 GeneCards:GC01M017733
HGNC:HGNC:30297 MIM:609587 neXtProt:NX_Q9P258 PharmGKB:PA142671091
InParanoid:Q9P258 GenomeRNAi:55920 NextBio:61323 Bgee:Q9P258
CleanEx:HS_RCC2 Genevestigator:Q9P258 GermOnline:ENSG00000179051
Uniprot:Q9P258
Length = 522
Score = 251 (93.4 bits), Expect = 1.4e-18, P = 1.4e-18
Identities = 105/423 (24%), Positives = 175/423 (41%)
Query: 20 KSAIYVWGYNHSGQTGRKGRERQLRIPKQLP-----PELFGCPAGANSRWLDIACGHEHT 74
K + ++G + GRK +Q + L P +GC AG R + H+
Sbjct: 103 KGQLLIFGATNWDLIGRKEVPKQQAAYRNLGQNLWGPHRYGCLAGVRVRTVVSGSCAAHS 162
Query: 75 AAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRE 134
+ ++G L++WG NE GQLG G + + P ++ L E + S +CG + T A+ E
Sbjct: 163 LLITTEGKLWSWGRNEKGQLGHGDTKRVEAPRLIEGLSHEVIVSAACGRNHTLALTETGS 222
Query: 135 --NDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWG 192
G +L + Q P P I +++CG+ + + G L ++G
Sbjct: 223 VFAFGENKMGQLGLGNQTDAVPSPAQIMYNGQP---ITKMACGAEFSMIMDCKGNLYSFG 279
Query: 193 YNEYGQLGRGITCEGL-QGPR-------VIKGYAKFLDEAPELE-------KITQVSCGE 237
EYGQLG + + + R V + A F+++ + + + V+CG
Sbjct: 280 CPEYGQLGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVRDVACGA 339
Query: 238 YHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALD--GIFIKDVACGGVHS 295
H+ + V++WG G G+LGH + E++PR V D G + G S
Sbjct: 340 NHTLVLDSQKRVFSWGFGGYGRLGHAEQKD---EMVPRLVKLFDFPGRGASQIYAGYTCS 396
Query: 296 CALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHS 355
A++ G L+ WG + + ES Y + + L ++ +ACG S
Sbjct: 397 FAVSEVGGLFFWGATNTSR---------------ESTMYPKAVQDLCGWR-IRSLACGKS 440
Query: 356 HTLVYMRDGRIHGWGYN------SYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSA 409
+V + I WG + YG + ST A +D E ++A G HS
Sbjct: 441 SIIVAADESTI-SWGPSPTFGELGYGDHKPKSSTAAQEVKTLDGIFSE--QVAMGYSHSL 497
Query: 410 VLA 412
V+A
Sbjct: 498 VIA 500
Score = 237 (88.5 bits), Expect = 5.3e-17, P = 5.3e-17
Identities = 91/313 (29%), Positives = 135/313 (43%)
Query: 139 ISTS-RLWVWGQNQGSNF----------PRLFWGAFTPNTIICQVSCGSVHVVALSECGL 187
I+T +LW WG+N+ PRL G + +I +CG H +AL+E G
Sbjct: 165 ITTEGKLWSWGRNEKGQLGHGDTKRVEAPRLIEGL--SHEVIVSAACGRNHTLALTETGS 222
Query: 188 LQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENG 247
+ A+G N+ GQLG G + + P I Y + P IT+++CG S + G
Sbjct: 223 VFAFGENKMGQLGLGNQTDAVPSPAQIM-Y----NGQP----ITKMACGAEFSMIMDCKG 273
Query: 248 EVYTWGLGSVGQLGHCS-------LQ--SGDKELLPRRVVAL-----DG-------IFIK 286
+Y++G GQLGH S Q D EL+PRRV DG + ++
Sbjct: 274 NLYSFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVR 333
Query: 287 DVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPN- 345
DVACG H+ L S+ +++WG G+LG Q ++P R + + P
Sbjct: 334 DVACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKDE--MVP-------RLVKLFDFPGR 384
Query: 346 GVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPV-DWCVGEVRKLAAG 404
G + G++ + G + WG A N YP V D C +R LA G
Sbjct: 385 GASQIYAGYTCSFAVSEVGGLFFWG------ATNTSRESTMYPKAVQDLCGWRIRSLACG 438
Query: 405 GGHSAVLADACSL 417
V AD ++
Sbjct: 439 KSSIIVAADESTI 451
Score = 222 (83.2 bits), Expect = 2.6e-15, P = 2.6e-15
Identities = 97/375 (25%), Positives = 163/375 (43%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
I + ++ WG N GQ G G +++ P+ + G ++ + ACG HT A
Sbjct: 165 ITTEGKLWSWGRNEKGQLGH-GDTKRVEAPRLIE----GL---SHEVIVSAACGRNHTLA 216
Query: 77 VASDGTLFTWGANEFGQLGDGTE-EGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREN 135
+ G++F +G N+ GQLG G + + P ++ + + ++CGA + I + + N
Sbjct: 217 LTETGSVFAFGENKMGQLGLGNQTDAVPSPAQI-MYNGQPITKMACGAEFSM-IMDCKGN 274
Query: 136 DGTISTSRLWVWGQNQGSNF--------------PR---LFW-----GAF--TPNTIICQ 171
+ G N F PR +F G PN ++
Sbjct: 275 LYSFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVRD 334
Query: 172 VSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKIT 231
V+CG+ H + L + +WG+ YG+LG + + PR++K L + P +
Sbjct: 335 VACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMV-PRLVK-----LFDFPG-RGAS 387
Query: 232 QVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACG 291
Q+ G S AVSE G ++ WG + S + + P+ V L G I+ +ACG
Sbjct: 388 QIYAGYTCSFAVSEVGGLFFWGATNT---------SRESTMYPKAVQDLCGWRIRSLACG 438
Query: 292 GVHSCALTSKGALYAWGGSQA-GQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGV--Q 348
S + + + +WG S G+LG G P +S T + + L +G+ +
Sbjct: 439 K-SSIIVAADESTISWGPSPTFGELGYGDHK------P-KSSTAAQEVKTL---DGIFSE 487
Query: 349 LVACGHSHTLVYMRD 363
VA G+SH+LV RD
Sbjct: 488 QVAMGYSHSLVIARD 502
>TAIR|locus:2035423 [details] [associations]
symbol:AT1G19880 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] [GO:0008536 "Ran GTPase binding"
evidence=ISS] INTERPRO:IPR000408 Pfam:PF00415 EMBL:CP002684
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 OMA:FGENKLG
IPI:IPI00543359 RefSeq:NP_173417.2 UniGene:At.16200
ProteinModelPortal:F4HQZ1 SMR:F4HQZ1 PRIDE:F4HQZ1
EnsemblPlants:AT1G19880.1 GeneID:838576 KEGG:ath:AT1G19880
Uniprot:F4HQZ1
Length = 538
Score = 251 (93.4 bits), Expect = 1.5e-18, P = 1.5e-18
Identities = 90/292 (30%), Positives = 132/292 (45%)
Query: 36 RKGR-ERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGTLFTWGANEFGQL 94
RKG E L P +L P + G N R++ C H A+ +G +TWG NE GQL
Sbjct: 36 RKGAMEGNLVSPTRLRPLV-----GVNIRFVATGCASFHCVALDVEGRCYTWGRNEKGQL 90
Query: 95 GDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTSRLWVWGQNQGSN 154
G G R P V L + + G + T +++ ++ G ++ G N
Sbjct: 91 GHGDMIQRDRPTVVSGLSKHKIVKAAAGRNHTVVVSDDGQSLG-FGWNKYGQLGLGSAKN 149
Query: 155 -FPRLFWGAFTP-----NTIICQVSCGSVHVVALSE---CGLLQAWGYNEYGQLGRGITC 205
F + + TP + + V+CG+ V LS +L A G +YGQLG G
Sbjct: 150 GFVSVEVES-TPLPCVVSDEVTNVACGADFTVWLSSTEGASILTA-GLPQYGQLGHGTDN 207
Query: 206 E-GLQGPRVIKGY-AKFLDEA-PEL--EKITQVSCGEYHSAAVSENGEVYTWGLGSVGQL 260
E ++ V Y A+ +A L E I +V+CG H+ AV +NG VYTWG G G+L
Sbjct: 208 EFNMKDSSVRLAYEAQPRPKAIASLAGETIVKVACGTNHTVAVDKNGYVYTWGFGGYGRL 267
Query: 261 GHCSLQSGDKELLPRRVVAL--DGIFIKD--VACGGVHSCALTSKGALYAWG 308
GH + D E PRR+ + + + ++ G +S G LY WG
Sbjct: 268 GH--REQKD-EWAPRRIDVFQRNNVLPPNAILSAGSANSACTAGGGQLYMWG 316
Score = 231 (86.4 bits), Expect = 2.7e-16, P = 2.7e-16
Identities = 93/358 (25%), Positives = 157/358 (43%)
Query: 24 YVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGTL 83
Y WG N GQ G I + P + G + + + A G HT V+ DG
Sbjct: 80 YTWGRNEKGQLGHGDM-----IQRDRPTVVSGL---SKHKIVKAAAGRNHTVVVSDDGQS 131
Query: 84 FTWGANEFGQLGDGTEEGRKHPEKVKQ-----LQSEFVKSISCGAHCTAAIAEPRENDGT 138
+G N++GQLG G+ + +V+ + S+ V +++CGA T ++ +
Sbjct: 132 LGFGWNKYGQLGLGSAKNGFVSVEVESTPLPCVVSDEVTNVACGADFTVWLSSTE--GAS 189
Query: 139 ISTSRLWVWGQ---------NQGSNFPRLFWGAFT-PNTI-------ICQVSCGSVHVVA 181
I T+ L +GQ N + RL + A P I I +V+CG+ H VA
Sbjct: 190 ILTAGLPQYGQLGHGTDNEFNMKDSSVRLAYEAQPRPKAIASLAGETIVKVACGTNHTVA 249
Query: 182 LSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSA 241
+ + G + WG+ YG+LG + PR I + + P +S G +SA
Sbjct: 250 VDKNGYVYTWGFGGYGRLGHREQKDEW-APRRIDVFQRNNVLPPN----AILSAGSANSA 304
Query: 242 AVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSK 301
+ G++Y WG ++ + +GD + P+ ++ L G ++ + G +H
Sbjct: 305 CTAGGGQLYMWG-----KIKN----NGDDWMYPKPMMDLSGWNLRWMDSGSMHHFVGADS 355
Query: 302 GALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLV 359
+ +WG +Q G+LG GP + S P + D + ++ GV ACG H++V
Sbjct: 356 SCI-SWGHAQYGELGYGPNGQKSSAAPKKVDM-LEGMHVM----GV---ACGFCHSMV 404
Score = 227 (85.0 bits), Expect = 7.6e-16, P = 7.6e-16
Identities = 72/231 (31%), Positives = 107/231 (46%)
Query: 174 CGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQV 233
C S H VAL G WG NE GQLG G + P V+ G +K KI +
Sbjct: 65 CASFHCVALDVEGRCYTWGRNEKGQLGHGDMIQR-DRPTVVSGLSK--------HKIVKA 115
Query: 234 SCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSG----DKELLPRRVVALDGIFIKDVA 289
+ G H+ VS++G+ +G GQLG S ++G + E P V D + +VA
Sbjct: 116 AAGRNHTVVVSDDGQSLGFGWNKYGQLGLGSAKNGFVSVEVESTPLPCVVSDEV--TNVA 173
Query: 290 CGGVHSCALTS-KGALYAWGG-SQAGQLGLGPQTRSFSL------IPNESDTYFRNIPIL 341
CG + L+S +GA G Q GQLG G F++ + E+ + I L
Sbjct: 174 CGADFTVWLSSTEGASILTAGLPQYGQLGHGTDNE-FNMKDSSVRLAYEAQPRPKAIASL 232
Query: 342 VVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVD 392
V+ VACG +HT+ ++G ++ WG+ YG+ + + W P +D
Sbjct: 233 AGETIVK-VACGTNHTVAVDKNGYVYTWGFGGYGRLGHREQKDEWAPRRID 282
>MGI|MGI:1913989 [details] [associations]
symbol:Rcc1 "regulator of chromosome condensation 1"
species:10090 "Mus musculus" [GO:0000082 "G1/S transition of
mitotic cell cycle" evidence=ISO] [GO:0000790 "nuclear chromatin"
evidence=ISO] [GO:0000794 "condensed nuclear chromosome"
evidence=ISO] [GO:0003677 "DNA binding" evidence=IEA] [GO:0003682
"chromatin binding" evidence=ISO] [GO:0005085 "guanyl-nucleotide
exchange factor activity" evidence=IEA] [GO:0005087 "Ran
guanyl-nucleotide exchange factor activity" evidence=ISO;IDA]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0007049 "cell cycle" evidence=IEA] [GO:0007052
"mitotic spindle organization" evidence=ISO] [GO:0007059
"chromosome segregation" evidence=ISO] [GO:0007067 "mitosis"
evidence=IEA] [GO:0007088 "regulation of mitosis" evidence=ISO]
[GO:0007090 "regulation of S phase of mitotic cell cycle"
evidence=ISO] [GO:0031492 "nucleosomal DNA binding" evidence=ISO]
[GO:0042393 "histone binding" evidence=ISO] [GO:0050790 "regulation
of catalytic activity" evidence=IDA] [GO:0051225 "spindle assembly"
evidence=ISO] [GO:0051301 "cell division" evidence=IEA]
MGI:MGI:1913989 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005634
GO:GO:0005737 GO:GO:0007088 GO:GO:0007059 GO:GO:0051301
GO:GO:0007067 GO:GO:0007052 GO:GO:0051225 GO:GO:0000082
GO:GO:0031965 GO:GO:0000790 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0000794 GO:GO:0005087 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 eggNOG:COG5184
GO:GO:0007090 GO:GO:0031492 GeneTree:ENSGT00700000104160 KO:K11493
CTD:1104 HOGENOM:HOG000234341 HOVERGEN:HBG017712 EMBL:AK150153
EMBL:BC019807 IPI:IPI00626402 RefSeq:NP_598639.1 UniGene:Mm.255045
ProteinModelPortal:Q8VE37 SMR:Q8VE37 MINT:MINT-2568412
STRING:Q8VE37 PhosphoSite:Q8VE37 PaxDb:Q8VE37 PRIDE:Q8VE37
Ensembl:ENSMUST00000084250 Ensembl:ENSMUST00000105951 GeneID:100088
KEGG:mmu:100088 OrthoDB:EOG4320Z9 ChiTaRS:RCC1 NextBio:354253
Bgee:Q8VE37 CleanEx:MM_RCC1 Genevestigator:Q8VE37
GermOnline:ENSMUSG00000028896 Uniprot:Q8VE37
Length = 421
Score = 247 (92.0 bits), Expect = 1.8e-18, P = 1.8e-18
Identities = 104/367 (28%), Positives = 164/367 (44%)
Query: 70 GHEHTAAVASDGTLFTWGANEFGQLG-DGTEEGRKH-PEKVKQLQSEFVKSISCGAHCTA 127
G HT ++ G ++++G N+ G LG D + EG + P KV +LQ + V+ +S G TA
Sbjct: 75 GGMHTVCLSQSGQVYSFGCNDEGALGRDTSVEGSEMVPGKV-ELQEKVVQ-VSAGDSHTA 132
Query: 128 AIAEPRENDGTISTSRLWVWGQNQGSN----FPRLFWGAFTPNTI-----ICQVSCGSVH 178
A+ E DG R+++WG + +N + P + + +V+ G+ H
Sbjct: 133 ALTE----DG-----RVFLWGSFRDNNGVIGLLEPMKKSMVPVQVQLDAPVVKVASGNDH 183
Query: 179 VVALSECGLLQAWGYNEYGQLGRG----ITCEGLQG-PRVIKGYAKFLDEAPELEKIT-- 231
+V L+ G L G E GQLGR G QG R++ L ++
Sbjct: 184 LVMLTNDGDLYTLGCGEQGQLGRVPELFANRGGRQGLGRLLVPRCVLLKSRGTRGRVRFQ 243
Query: 232 QVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVA-C 290
CG Y + A+S G VY +GL + QLG S +P+ + + V
Sbjct: 244 DAFCGAYFTFAISREGHVYGFGLSNYHQLGTPGTGSC---FIPQNLTSFKNSTKSWVGFS 300
Query: 291 GGVH-SCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQL 349
GG H + + S+G Y+ G ++ G+LGLG S IP T +P+ V
Sbjct: 301 GGQHHTVCMDSEGKAYSLGRAEYGRLGLGEGAEEKS-IP----TLISRLPV------VSS 349
Query: 350 VACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRK-----LAAG 404
VACG S +DGR+ WG + Q + AW SPV+ ++ +++G
Sbjct: 350 VACGASVGYAVSKDGRVFAWGMGTNYQLGTGQDEDAW--SPVEMTGKQLENRVVLTVSSG 407
Query: 405 GGHSAVL 411
G H+ +L
Sbjct: 408 GQHTVLL 414
Score = 227 (85.0 bits), Expect = 3.7e-16, P = 3.7e-16
Identities = 74/258 (28%), Positives = 119/258 (46%)
Query: 169 ICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELE 228
+ Q G +H V LS+ G + ++G N+ G LGR + EG + ++ G + E
Sbjct: 69 VVQAEAGGMHTVCLSQSGQVYSFGCNDEGALGRDTSVEGSE---MVPGKVELQ------E 119
Query: 229 KITQVSCGEYHSAAVSENGEVYTWGL--GSVGQLGHCSLQSGDKELLPRRVVALDGIFIK 286
K+ QVS G+ H+AA++E+G V+ WG + G +G L+ K ++P +V LD +K
Sbjct: 120 KVVQVSAGDSHTAALTEDGRVFLWGSFRDNNGVIG--LLEPMKKSMVPVQV-QLDAPVVK 176
Query: 287 DVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIP--ILVVP 344
VA G H LT+ G LY G + GQLG P+ F+ +P +L+
Sbjct: 177 -VASGNDHLVMLTNDGDLYTLGCGEQGQLGRVPEL--FANRGGRQGLGRLLVPRCVLLKS 233
Query: 345 NGV------QLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEV 398
G Q CG T R+G ++G+G ++Y Q + + P +
Sbjct: 234 RGTRGRVRFQDAFCGAYFTFAISREGHVYGFGLSNYHQLGTPGTGSCFIPQNLTSFKNST 293
Query: 399 RKLA--AGGGHSAVLADA 414
+ +GG H V D+
Sbjct: 294 KSWVGFSGGQHHTVCMDS 311
Score = 167 (63.8 bits), Expect = 2.2e-09, P = 2.2e-09
Identities = 91/333 (27%), Positives = 143/333 (42%)
Query: 73 HTAAVASDGTLFTWGANEFGQLGDGTEE-GRKHPEKVKQLQSEFVKSISCGAHCTAAIAE 131
H + G + T G + GQLG G RK P V LQ + V++ + G H T +++
Sbjct: 27 HRSHNTEPGLVLTLGQGDVGQLGLGESVLERKKPALVPLLQ-DVVQAEAGGMH-TVCLSQ 84
Query: 132 PRE--NDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQ 189
+ + G L G++ + G + QVS G H AL+E G +
Sbjct: 85 SGQVYSFGCNDEGAL---GRDTSVEGSEMVPGKVELQEKVVQVSAGDSHTAALTEDGRVF 141
Query: 190 AWGY--NEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENG 247
WG + G +G + P ++ LD AP + +V+ G H ++ +G
Sbjct: 142 LWGSFRDNNGVIGLLEPMKKSMVPVQVQ-----LD-AP----VVKVASGNDHLVMLTNDG 191
Query: 248 EVYTWGLGSVGQLGHCS---LQSGDKE-----LLPRRVVALD-G----IFIKDVACGGVH 294
++YT G G GQLG G ++ L+PR V+ G + +D CG
Sbjct: 192 DLYTLGCGEQGQLGRVPELFANRGGRQGLGRLLVPRCVLLKSRGTRGRVRFQDAFCGAYF 251
Query: 295 SCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGH 354
+ A++ +G +Y +G S QLG P T S IP ++ T F+N V G + G
Sbjct: 252 TFAISREGHVYGFGLSNYHQLGT-PGTGS-CFIP-QNLTSFKNSTKSWV--GF---SGGQ 303
Query: 355 SHTLVYMRDGRIHGWGYNSYG-----QAANEKS 382
HT+ +G+ + G YG + A EKS
Sbjct: 304 HHTVCMDSEGKAYSLGRAEYGRLGLGEGAEEKS 336
Score = 166 (63.5 bits), Expect = 2.8e-09, P = 2.8e-09
Identities = 92/365 (25%), Positives = 147/365 (40%)
Query: 23 IYVWGYNHSGQTGRKGR-ERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDG 81
+Y +G N G GR E +P ++ EL + + ++ G HTAA+ DG
Sbjct: 88 VYSFGCNDEGALGRDTSVEGSEMVPGKV--EL-------QEKVVQVSAGDSHTAALTEDG 138
Query: 82 TLFTWGA--NEFGQLGDGTEEGRKHPEKVK-QLQSEFVKSISCGAHCTAAIAEPRENDGT 138
+F WG+ + G +G E +K V+ QL + VK S H NDG
Sbjct: 139 RVFLWGSFRDNNGVIGL-LEPMKKSMVPVQVQLDAPVVKVASGNDHLVMLT-----NDGD 192
Query: 139 ISTSRLWVWGQ---------NQGSN-------FPR--LFWGAFTPNTIICQVS-CGSVHV 179
+ T GQ N+G PR L T + Q + CG+
Sbjct: 193 LYTLGCGEQGQLGRVPELFANRGGRQGLGRLLVPRCVLLKSRGTRGRVRFQDAFCGAYFT 252
Query: 180 VALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYH 239
A+S G + +G + Y QLG G + + F + + S G++H
Sbjct: 253 FAISREGHVYGFGLSNYHQLGT----PGTGSCFIPQNLTSFKNST---KSWVGFSGGQHH 305
Query: 240 SAAVSENGEVYTWGLGSVGQLGHCSLQSGDKEL-LPRRVVALDGIFIKDVACGGVHSCAL 298
+ + G+ Y+ G G+LG L G +E +P + L + VACG A+
Sbjct: 306 TVCMDSEGKAYSLGRAEYGRLG---LGEGAEEKSIPTLISRLP--VVSSVACGASVGYAV 360
Query: 299 TSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTL 358
+ G ++AWG QLG G ++S + + N +L V +G Q HT+
Sbjct: 361 SKDGRVFAWGMGTNYQLGTGQDEDAWSPV-EMTGKQLENRVVLTVSSGGQ-------HTV 412
Query: 359 VYMRD 363
+ ++D
Sbjct: 413 LLVKD 417
Score = 162 (62.1 bits), Expect = 7.8e-09, P = 7.8e-09
Identities = 52/205 (25%), Positives = 92/205 (44%)
Query: 183 SECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAA 242
+E GL+ G + GQLG G + + P ++ P L+ + Q G H+
Sbjct: 32 TEPGLVLTLGQGDVGQLGLGESVLERKKPALV----------PLLQDVVQAEAGGMHTVC 81
Query: 243 VSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKG 302
+S++G+VY++G G LG + G E++P +V + + V+ G H+ ALT G
Sbjct: 82 LSQSGQVYSFGCNDEGALGRDTSVEGS-EMVPGKVELQEKVV--QVSAGDSHTAALTEDG 138
Query: 303 ALYAWGG--SQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVY 360
++ WG G +GL + S++P + + P++ V A G+ H ++
Sbjct: 139 RVFLWGSFRDNNGVIGLLEPMKK-SMVPVQVQL---DAPVVKV-------ASGNDHLVML 187
Query: 361 MRDGRIHGWGYNSYGQAANEKSTYA 385
DG ++ G GQ +A
Sbjct: 188 TNDGDLYTLGCGEQGQLGRVPELFA 212
Score = 139 (54.0 bits), Expect = 2.8e-06, P = 2.8e-06
Identities = 70/256 (27%), Positives = 106/256 (41%)
Query: 67 IACGHEHTAAVASDGTLFTWGANEFGQLGDGTE-----EGRKHPEKVKQLQSEFVKSIS- 120
+A G++H + +DG L+T G E GQLG E GR+ ++ + +KS
Sbjct: 177 VASGNDHLVMLTNDGDLYTLGCGEQGQLGRVPELFANRGGRQGLGRLLVPRCVLLKSRGT 236
Query: 121 ----------CGAHCTAAIAEPRENDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTII- 169
CGA+ T AI+ G ++ + GS F +F +T
Sbjct: 237 RGRVRFQDAFCGAYFTFAISREGHVYGFGLSNYHQLGTPGTGSCFIPQNLTSFKNSTKSW 296
Query: 170 CQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEK 229
S G H V + G + G EYG+LG G E P +I L
Sbjct: 297 VGFSGGQHHTVCMDSEGKAYSLGRAEYGRLGLGEGAEEKSIPTLIS----------RLPV 346
Query: 230 ITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVA--LDGIFIKD 287
++ V+CG AVS++G V+ WG+G+ QLG + Q D P + L+ +
Sbjct: 347 VSSVACGASVGYAVSKDGRVFAWGMGTNYQLG--TGQDEDA-WSPVEMTGKQLENRVVLT 403
Query: 288 VACGGVHSCALTSKGA 303
V+ GG H+ L A
Sbjct: 404 VSSGGQHTVLLVKDQA 419
Score = 133 (51.9 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 58/208 (27%), Positives = 92/208 (44%)
Query: 212 RVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKE 271
R+ K + D P+ +K+ +VS H + +E G V T G G VGQLG G+
Sbjct: 5 RIAKRRSPPEDAIPKSKKV-KVS----HRSHNTEPGLVLTLGQGDVGQLG-----LGES- 53
Query: 272 LLPRRVVALDGIFIKDVA---CGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIP 328
+L R+ AL + ++DV GG+H+ L+ G +Y++G + G LG ++P
Sbjct: 54 VLERKKPALVPL-LQDVVQAEAGGMHTVCLSQSGQVYSFGCNDEGALGRDTSVEGSEMVP 112
Query: 329 NESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGY---NSYGQAANEKSTYA 385
+ + + V V+ G SHT DGR+ WG N+ E +
Sbjct: 113 GKVE----------LQEKVVQVSAGDSHTAALTEDGRVFLWGSFRDNNGVIGLLEPMKKS 162
Query: 386 WYPSPVDWCVGEVRKLAAGGGHSAVLAD 413
P V V K+A+G H +L +
Sbjct: 163 MVPVQVQ-LDAPVVKVASGNDHLVMLTN 189
Score = 124 (48.7 bits), Expect = 0.00012, P = 0.00012
Identities = 45/169 (26%), Positives = 76/169 (44%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
I + +Y +G ++ Q G G IP+ L F + W+ + G HT
Sbjct: 255 ISREGHVYGFGLSNYHQLGTPGTGSCF-IPQNLTS--F---KNSTKSWVGFSGGQHHTVC 308
Query: 77 VASDGTLFTWGANEFGQLG--DGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEP-R 133
+ S+G ++ G E+G+LG +G EE + P + +L V S++CGA A+++ R
Sbjct: 309 MDSEGKAYSLGRAEYGRLGLGEGAEE-KSIPTLISRLP--VVSSVACGASVGYAVSKDGR 365
Query: 134 ENDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVAL 182
+ T+ GQ++ + P G N ++ VS G H V L
Sbjct: 366 VFAWGMGTNYQLGTGQDEDAWSPVEMTGKQLENRVVLTVSSGGQHTVLL 414
>UNIPROTKB|I3LT85 [details] [associations]
symbol:RCC1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0051225 "spindle assembly" evidence=IEA] [GO:0042393
"histone binding" evidence=IEA] [GO:0031965 "nuclear membrane"
evidence=IEA] [GO:0031492 "nucleosomal DNA binding" evidence=IEA]
[GO:0007090 "regulation of S phase of mitotic cell cycle"
evidence=IEA] [GO:0007088 "regulation of mitosis" evidence=IEA]
[GO:0007059 "chromosome segregation" evidence=IEA] [GO:0007052
"mitotic spindle organization" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005087 "Ran guanyl-nucleotide
exchange factor activity" evidence=IEA] [GO:0000794 "condensed
nuclear chromosome" evidence=IEA] [GO:0000790 "nuclear chromatin"
evidence=IEA] [GO:0000082 "G1/S transition of mitotic cell cycle"
evidence=IEA] INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005737
GO:GO:0007088 GO:GO:0007059 GO:GO:0007052 GO:GO:0051225
GO:GO:0000082 GO:GO:0031965 GO:GO:0000790 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0000794 GO:GO:0005087
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
GO:GO:0007090 GO:GO:0031492 GeneTree:ENSGT00700000104160 KO:K11493
CTD:1104 OMA:GTESCFV EMBL:FP565629 RefSeq:XP_003482053.1
Ensembl:ENSSSCT00000028011 GeneID:100621543 KEGG:ssc:100621543
Uniprot:I3LT85
Length = 421
Score = 247 (92.0 bits), Expect = 1.8e-18, P = 1.8e-18
Identities = 117/433 (27%), Positives = 185/433 (42%)
Query: 13 PVDNIPAKSAIYVWGYNHSGQTGR-----KGRERQL----RIPKQLPPELFGCPAGANSR 63
P D +P + V +HS + G +G QL + ++ P L P
Sbjct: 13 PEDALPKSKKVKVSHRSHSTEPGLVLTLGQGDVGQLGLGENVMERKKPALVPIPEDI--- 69
Query: 64 WLDIACGHEHTAAVASDGTLFTWGANEFGQLG-DGTEEGRKH-PEKVKQLQSEFVKSISC 121
+ G HT ++ G ++++G N+ G LG D + EG + P KV +LQ + V+ +S
Sbjct: 70 -VQAEAGGMHTVCLSKSGQVYSFGCNDEGALGRDTSVEGSEMVPGKV-ELQEKVVQ-VSA 126
Query: 122 GAHCTAAIAEPRENDGTISTSRLWVWGQNQGSN----FPRLFWGAFTPNTI-----ICQV 172
G TAA+ E DG R+++WG + +N + P + + +V
Sbjct: 127 GDSHTAALTE----DG-----RVFLWGSFRDNNGVIGLLEPMKKSMVPVQVQLSMPVVKV 177
Query: 173 SCGSVHVVALSECGLLQAWGYNEYGQLGRG----ITCEGLQG-PRVIKGYAKFLDEAPEL 227
+ G+ H+V L+ G L G E GQLGR G QG R++ L
Sbjct: 178 ASGNDHLVMLTADGELYTLGSGEQGQLGRVPELFANRGGRQGLERLLVPKCVMLKSRGSR 237
Query: 228 EKIT--QVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFI 285
+ CG Y + A+S G VY +GL + QLG +S +P+ + +
Sbjct: 238 GHVRFQDAFCGAYFTFAISSEGHVYGFGLSNYHQLGTPGTESC---FVPQNLTSFKNSTK 294
Query: 286 KDVA-CGGVH-SCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVV 343
V GG H + + S+G Y+ G ++ G+LGLG S +P T +P
Sbjct: 295 SWVRFSGGQHHTVCMDSEGRAYSLGRAEYGRLGLGEGAEEKS-VP----TLISRLP---- 345
Query: 344 PNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-----V 398
V VACG S +DGR+ WG + Q + AW SPV+ + V
Sbjct: 346 --AVSSVACGASVGYAVTKDGRVFAWGMGTNYQLGTGQEEDAW--SPVEMTGKQLENRMV 401
Query: 399 RKLAAGGGHSAVL 411
+++GG H+ +L
Sbjct: 402 LSVSSGGQHTVLL 414
Score = 219 (82.2 bits), Expect = 3.1e-15, P = 3.1e-15
Identities = 76/267 (28%), Positives = 121/267 (45%)
Query: 165 PNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEA 224
P I+ Q G +H V LS+ G + ++G N+ G LGR + EG + ++ G +
Sbjct: 66 PEDIV-QAEAGGMHTVCLSKSGQVYSFGCNDEGALGRDTSVEGSE---MVPGKVELQ--- 118
Query: 225 PELEKITQVSCGEYHSAAVSENGEVYTWGL--GSVGQLGHCSLQSGDKELLPRRVVALDG 282
EK+ QVS G+ H+AA++E+G V+ WG + G +G L+ K ++P +V L
Sbjct: 119 ---EKVVQVSAGDSHTAALTEDGRVFLWGSFRDNNGVIG--LLEPMKKSMVPVQV-QLSM 172
Query: 283 IFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILV 342
+K VA G H LT+ G LY G + GQLG P+ L N + + L+
Sbjct: 173 PVVK-VASGNDHLVMLTADGELYTLGSGEQGQLGRVPE-----LFANRGGR--QGLERLL 224
Query: 343 VPNGVQLVA-------------CGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPS 389
VP V L + CG T +G ++G+G ++Y Q + + P
Sbjct: 225 VPKCVMLKSRGSRGHVRFQDAFCGAYFTFAISSEGHVYGFGLSNYHQLGTPGTESCFVPQ 284
Query: 390 PVDWCVGEVRKLA--AGGGHSAVLADA 414
+ + +GG H V D+
Sbjct: 285 NLTSFKNSTKSWVRFSGGQHHTVCMDS 311
Score = 142 (55.0 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 50/191 (26%), Positives = 84/191 (43%)
Query: 174 CGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQV 233
CG+ A+S G + +G + Y QLG G + V + F + + +
Sbjct: 247 CGAYFTFAISSEGHVYGFGLSNYHQLGT----PGTESCFVPQNLTSFKNST---KSWVRF 299
Query: 234 SCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKEL-LPRRVVALDGIFIKDVACGG 292
S G++H+ + G Y+ G G+LG L G +E +P + L + VACG
Sbjct: 300 SGGQHHTVCMDSEGRAYSLGRAEYGRLG---LGEGAEEKSVPTLISRLPAV--SSVACGA 354
Query: 293 VHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVAC 352
A+T G ++AWG QLG G + ++S + + N +L V +G Q
Sbjct: 355 SVGYAVTKDGRVFAWGMGTNYQLGTGQEEDAWSPV-EMTGKQLENRMVLSVSSGGQ---- 409
Query: 353 GHSHTLVYMRD 363
HT++ ++D
Sbjct: 410 ---HTVLLVKD 417
>ZFIN|ZDB-GENE-090311-56 [details] [associations]
symbol:si:ch73-190m4.1 "si:ch73-190m4.1"
species:7955 "Danio rerio" [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
[GO:0006464 "cellular protein modification process" evidence=IEA]
Pfam:PF00632 InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119
INTERPRO:IPR000408 Pfam:PF00415 ZFIN:ZDB-GENE-090311-56
GO:GO:0016567 GO:GO:0005622 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 SUPFAM:SSF56204 GeneTree:ENSGT00700000104312
EMBL:CR788312 EMBL:CU467858 IPI:IPI00933554 RefSeq:XP_688463.5
UniGene:Dr.113692 UniGene:Dr.113776 Ensembl:ENSDART00000111114
GeneID:559981 KEGG:dre:559981 NextBio:20883233 Uniprot:F1RDE7
Length = 992
Score = 252 (93.8 bits), Expect = 3.8e-18, P = 3.8e-18
Identities = 82/267 (30%), Positives = 127/267 (47%)
Query: 108 VKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTSRLWVWGQNQ-GS-NFPRLFWGAFTP 165
+K L++ V I+CG + A+ NDG +L+VWG+N G + G +P
Sbjct: 112 LKGLENRQVIQIACGDQHSMALT----NDG-----QLFVWGENALGQLGLRKEQAGTQSP 162
Query: 166 NTI--IC-----QVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYA 218
+ +C Q+S G H LS G++ WG N GQLG G T + P V+
Sbjct: 163 RHLQSLCGIPVAQISAGGNHSFVLSLSGVVFGWGGNSAGQLGLGDTTDRFV-PTVVNSLK 221
Query: 219 KFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVV 278
+ +KI +SCG H+AA+++ G V+T+G G GQLGH S + E PR V
Sbjct: 222 R--------KKIVSISCGGEHTAALAKGGTVFTFGSGGFGQLGHNSFKD---EHHPRLVA 270
Query: 279 ALDGIFIKDVACGGVHSCALTSKGAL-YAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRN 337
L G + V CG H+ T+ L Y++G GQLG G Q + +P + T + +
Sbjct: 271 ELWGSKVSQVTCGRNHTLVSTASPKLIYSFGCGMQGQLGNGEQVKQSVPLPVDQPTEYND 330
Query: 338 IPILVVPNGVQLVACGHSHTL-VYMRD 363
+Q + G +H+ +Y ++
Sbjct: 331 ------EYTIQKLVAGENHSFALYFKE 351
Score = 251 (93.4 bits), Expect = 4.9e-18, P = 4.9e-18
Identities = 61/214 (28%), Positives = 105/214 (49%)
Query: 226 ELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFI 285
E ++ Q++CG+ HS A++ +G+++ WG ++GQLG Q+G + PR + +L GI +
Sbjct: 116 ENRQVIQIACGDQHSMALTNDGQLFVWGENALGQLGLRKEQAGTQS--PRHLQSLCGIPV 173
Query: 286 KDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPN 345
++ GG HS L+ G ++ WGG+ AGQLGLG T F +P ++ R
Sbjct: 174 AQISAGGNHSFVLSLSGVVFGWGGNSAGQLGLGDTTDRF--VPTVVNSLKRK-------- 223
Query: 346 GVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAG 404
+ ++CG HT + G + +G +GQ + +P V G +V ++ G
Sbjct: 224 KIVSISCGGEHTAALAKGGTVFTFGSGGFGQLGHNSFKDEHHPRLVAELWGSKVSQVTCG 283
Query: 405 GGHSAVLADACSLKELCEFRLAESVTLSNASEIE 438
H+ L S K + F L N +++
Sbjct: 284 RNHT--LVSTASPKLIYSFGCGMQGQLGNGEQVK 315
Score = 205 (77.2 bits), Expect = 5.9e-13, P = 5.9e-13
Identities = 71/230 (30%), Positives = 108/230 (46%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++VWG N GQ G + + + P+ L L G P I+ G H+ ++ G
Sbjct: 139 LFVWGENALGQLGLRKEQAGTQSPRHLQ-SLCGIPVA------QISAGGNHSFVLSLSGV 191
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
+F WG N GQLG G R P V L+ + + SISCG TAA+A+ GT+ T
Sbjct: 192 VFGWGGNSAGQLGLGDTTDRFVPTVVNSLKRKKIVSISCGGEHTAALAK----GGTVFTF 247
Query: 143 RLWVWGQNQGSNF-----PRL---FWGAFTPNTIICQVSCGSVH-VVALSECGLLQAWGY 193
+GQ ++F PRL WG+ + QV+CG H +V+ + L+ ++G
Sbjct: 248 GSGGFGQLGHNSFKDEHHPRLVAELWGSK-----VSQVTCGRNHTLVSTASPKLIYSFGC 302
Query: 194 NEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAV 243
GQLG G + P + ++ DE ++K+ GE HS A+
Sbjct: 303 GMQGQLGNGEQVKQ-SVPLPVDQPTEYNDEYT-IQKLV---AGENHSFAL 347
Score = 201 (75.8 bits), Expect = 1.6e-12, P = 1.6e-12
Identities = 72/247 (29%), Positives = 115/247 (46%)
Query: 61 NSRWLDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEE-GRKHPEKVKQLQSEFVKSI 119
N + + IACG +H+ A+ +DG LF WG N GQLG E+ G + P ++ L V I
Sbjct: 117 NRQVIQIACGDQHSMALTNDGQLFVWGENALGQLGLRKEQAGTQSPRHLQSLCGIPVAQI 176
Query: 120 SCGA-HC-TAAIAEPRENDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSV 177
S G H +++ G S +L + G P + + I+ +SCG
Sbjct: 177 SAGGNHSFVLSLSGVVFGWGGNSAGQLGL-GDTTDRFVPTVV-NSLKRKKIV-SISCGGE 233
Query: 178 HVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGE 237
H AL++ G + +G +GQLG + + PR++ A+ K++QV+CG
Sbjct: 234 HTAALAKGGTVFTFGSGGFGQLGHN-SFKDEHHPRLV---AELWGS-----KVSQVTCGR 284
Query: 238 YHSAAVSENGE-VYTWGLGSVGQLGHCSLQSGDKELLP--RRVVALDGIFIKDVACGGVH 294
H+ + + + +Y++G G GQLG+ Q LP + D I+ + G H
Sbjct: 285 NHTLVSTASPKLIYSFGCGMQGQLGNGE-QVKQSVPLPVDQPTEYNDEYTIQKLVAGENH 343
Query: 295 SCALTSK 301
S AL K
Sbjct: 344 SFALYFK 350
Score = 185 (70.2 bits), Expect = 9.2e-11, P = 9.2e-11
Identities = 59/188 (31%), Positives = 83/188 (44%)
Query: 230 ITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVA 289
+ Q+S G HS +S +G V+ WG S GQLG L +P V +L I ++
Sbjct: 173 VAQISAGGNHSFVLSLSGVVFGWGGNSAGQLG---LGDTTDRFVPTVVNSLKRKKIVSIS 229
Query: 290 CGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQL 349
CGG H+ AL G ++ +G GQLG SF D + + + + V
Sbjct: 230 CGGEHTAALAKGGTVFTFGSGGFGQLG----HNSFK------DEHHPRLVAELWGSKVSQ 279
Query: 350 VACGHSHTLVYMRDGR-IHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-----EVRKLAA 403
V CG +HTLV + I+ +G GQ N + P PVD ++KL A
Sbjct: 280 VTCGRNHTLVSTASPKLIYSFGCGMQGQLGNGEQVKQSVPLPVDQPTEYNDEYTIQKLVA 339
Query: 404 GGGHSAVL 411
G HS L
Sbjct: 340 GENHSFAL 347
>UNIPROTKB|G3V2I3 [details] [associations]
symbol:RCCD1 "RCC1 domain-containing protein 1"
species:9606 "Homo sapiens" [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0005886 "plasma membrane" evidence=IDA] INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005886 GO:GO:0005737 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 EMBL:AC068831 HGNC:HGNC:30457
ProteinModelPortal:G3V2I3 SMR:G3V2I3 Ensembl:ENST00000555155
ArrayExpress:G3V2I3 Bgee:G3V2I3 Uniprot:G3V2I3
Length = 374
Score = 188 (71.2 bits), Expect = 4.0e-18, Sum P(2) = 4.0e-18
Identities = 42/102 (41%), Positives = 64/102 (62%)
Query: 224 APELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGI 283
APEL + Q+ G H+ + G+V++WG G GQLGH +L++ EL PR + AL G+
Sbjct: 155 APEL-RARQLELGAEHALLLDAAGQVFSWGGGRHGQLGHGTLEA---ELEPRLLEALQGL 210
Query: 284 FIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFS 325
+ +VA GG HS ++ G +Y WG +++GQL L P TR+ +
Sbjct: 211 VMAEVAAGGWHSVCVSETGDIYIWGWNESGQLAL-P-TRNLA 250
Score = 153 (58.9 bits), Expect = 4.9e-14, Sum P(2) = 4.9e-14
Identities = 78/280 (27%), Positives = 112/280 (40%)
Query: 22 AIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDG 81
A + +G+ GQ GR RQ+ P L + C A+ W +TA V G
Sbjct: 8 AWFGFGFCGFGQELGSGRGRQVHSPSPLRAGVDICRVSAS--W-------SYTAFVTRGG 58
Query: 82 TLFTWGA--NEFGQLGDG-TEEG-----RKHPEKVKQLQSEFVKSISCGAHCTAAIAEPR 133
L G+ G+ D EG R P LQ +S G A P
Sbjct: 59 RLELSGSASGAAGRCKDAWASEGLLAVLRAGPGPEALLQVWAAESALRGEPLWAQNVVPE 118
Query: 134 ---END--GTISTSRLWVWGQNQGSNFPRL-FWGAFTPNTIICQVSCGSVHVVALSECGL 187
E+D G RL + + PR F+ P Q+ G+ H + L G
Sbjct: 119 AEGEDDPAGEAQAGRLPLLPCARAYVSPRAPFYRPLAPELRARQLELGAEHALLLDAAGQ 178
Query: 188 LQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENG 247
+ +WG +GQLG G T E PR++ EA + + +V+ G +HS VSE G
Sbjct: 179 VFSWGGGRHGQLGHG-TLEAELEPRLL--------EALQGLVMAEVAAGGWHSVCVSETG 229
Query: 248 EVYTWGLGSVGQLGHCSLQ-SGDKELLPRRVVALDGIFIK 286
++Y WG GQL + + D E + R + DG +K
Sbjct: 230 DIYIWGWNESGQLALPTRNLAEDGETVAREELNEDGSQVK 269
Score = 136 (52.9 bits), Expect = 1.5e-10, Sum P(2) = 1.5e-10
Identities = 40/103 (38%), Positives = 54/103 (52%)
Query: 194 NEYG-QLGR-GITCEGLQGPRV-IKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVY 250
NE G Q+ R G +G P + ++ + LD P + SCG H+A V+ GE+Y
Sbjct: 262 NEDGSQVKRTGGAEDGAPAPFIAVQPFPALLD-LPMGSDAVKASCGSRHTAVVTRTGELY 320
Query: 251 TWGLGSVGQLGHCSLQSGDKELLPRRV-VALDG-IFIKDVACG 291
TWG G GQLGH S D+ PRRV +D + +K V CG
Sbjct: 321 TWGWGKYGQLGHEDTTSLDR---PRRVEYFVDKQLQVKAVTCG 360
Score = 123 (48.4 bits), Expect = 0.00013, P = 0.00013
Identities = 29/77 (37%), Positives = 41/77 (53%)
Query: 51 PELFGCPAGANSRWLDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKV-- 108
P L P G+++ + +CG HTA V G L+TWG ++GQLG P +V
Sbjct: 289 PALLDLPMGSDA--VKASCGSRHTAVVTRTGELYTWGWGKYGQLGHEDTTSLDRPRRVEY 346
Query: 109 ---KQLQSEFVKSISCG 122
KQLQ VK+++CG
Sbjct: 347 FVDKQLQ---VKAVTCG 360
Score = 103 (41.3 bits), Expect = 7.7e-07, Sum P(2) = 7.7e-07
Identities = 26/79 (32%), Positives = 44/79 (55%)
Query: 171 QVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKI 230
+ SCGS H ++ G L WG+ +YGQLG T L PR ++ Y F+D+ +++ +
Sbjct: 302 KASCGSRHTAVVTRTGELYTWGWGKYGQLGHEDTTS-LDRPRRVE-Y--FVDKQLQVKAV 357
Query: 231 TQVSCGEYHSAAVS-ENGE 248
T CG +++ + E G+
Sbjct: 358 T---CGPWNTYVYAVEKGK 373
Score = 100 (40.3 bits), Expect = 4.0e-18, Sum P(2) = 4.0e-18
Identities = 25/78 (32%), Positives = 40/78 (51%)
Query: 340 ILVVPNGVQLV--ACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG- 396
+L +P G V +CG HT V R G ++ WG+ YGQ +E +T P V++ V
Sbjct: 291 LLDLPMGSDAVKASCGSRHTAVVTRTGELYTWGWGKYGQLGHEDTTSLDRPRRVEYFVDK 350
Query: 397 --EVRKLAAGGGHSAVLA 412
+V+ + G ++ V A
Sbjct: 351 QLQVKAVTCGPWNTYVYA 368
Score = 85 (35.0 bits), Expect = 1.5e-10, Sum P(2) = 1.5e-10
Identities = 24/78 (30%), Positives = 35/78 (44%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
+ A ++ WG GQ G E +L P+ L L G ++A G H+
Sbjct: 173 LDAAGQVFSWGGGRHGQLGHGTLEAELE-PRLLEA-LQGLVMA------EVAAGGWHSVC 224
Query: 77 VASDGTLFTWGANEFGQL 94
V+ G ++ WG NE GQL
Sbjct: 225 VSETGDIYIWGWNESGQL 242
Score = 84 (34.6 bits), Expect = 2.2e-12, Sum P(2) = 2.2e-12
Identities = 25/72 (34%), Positives = 34/72 (47%)
Query: 289 ACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQ 348
+CG H+ +T G LY WG + GQLG T S P + YF + + V +
Sbjct: 304 SCGSRHTAVVTRTGELYTWGWGKYGQLG-HEDTTSLDR-PRRVE-YFVDKQLQV-----K 355
Query: 349 LVACGHSHTLVY 360
V CG +T VY
Sbjct: 356 AVTCGPWNTYVY 367
>UNIPROTKB|P23800 [details] [associations]
symbol:RCC1 "Regulator of chromosome condensation"
species:10036 "Mesocricetus auratus" [GO:0005634 "nucleus"
evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS] [GO:0007059
"chromosome segregation" evidence=ISS] [GO:0031492 "nucleosomal DNA
binding" evidence=ISS] [GO:0051225 "spindle assembly" evidence=ISS]
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005634 GO:GO:0005737
GO:GO:0007059 GO:GO:0051301 GO:GO:0007067 GO:GO:0051225
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0005085
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
GO:GO:0031492 HOVERGEN:HBG017712 EMBL:M33579 PIR:A34726
ProteinModelPortal:P23800 SMR:P23800 Uniprot:P23800
Length = 421
Score = 244 (91.0 bits), Expect = 4.0e-18, P = 4.0e-18
Identities = 104/367 (28%), Positives = 163/367 (44%)
Query: 70 GHEHTAAVASDGTLFTWGANEFGQLG-DGTEEGRKH-PEKVKQLQSEFVKSISCGAHCTA 127
G HT + G ++++G N+ G LG D + EG + P KV +LQ + V+ +S G TA
Sbjct: 75 GGMHTVCLNQSGQVYSFGCNDEGALGRDTSVEGSEMVPGKV-ELQEKVVQ-VSAGDSHTA 132
Query: 128 AIAEPRENDGTISTSRLWVWGQNQGSN----FPRLFWGAFTPNTI-----ICQVSCGSVH 178
A+ E DG R+++WG + +N + P + + +V+ G+ H
Sbjct: 133 ALTE----DG-----RVFLWGSFRDNNGVIGLLEPMKKSMVPVQVQLDMPVVKVASGNDH 183
Query: 179 VVALSECGLLQAWGYNEYGQLGRG----ITCEGLQG-PRVIKGYAKFLDEAPELEKIT-- 231
+V L+ G L G E GQLGR G QG R++ L ++
Sbjct: 184 LVMLTTDGDLYTLGCGEQGQLGRVPELFANRGGRQGLERLLVPKCVLLKSRGSRGRVRFQ 243
Query: 232 QVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVA-C 290
CG Y + A+S G VY +GL + QLG S +P+ + + V
Sbjct: 244 DAFCGAYLTFAISREGHVYGFGLSNYHQLGTPGTASC---FIPQNLTSFKNSTKSWVGFS 300
Query: 291 GGVH-SCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQL 349
GG H + + S+G Y+ G ++ G+LGLG S IP T +P+ V
Sbjct: 301 GGQHHTICMDSEGKAYSLGRAEYGRLGLGEGAEEKS-IP----TLISRLPV------VSS 349
Query: 350 VACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRK-----LAAG 404
VACG S +DGR+ WG + Q + AW SPV+ ++ +++G
Sbjct: 350 VACGASVGYAVSKDGRVFAWGMGTNYQLGTGQDEDAW--SPVEMTGKQLENRVVLTVSSG 407
Query: 405 GGHSAVL 411
G H+ +L
Sbjct: 408 GQHTVLL 414
Score = 220 (82.5 bits), Expect = 2.3e-15, P = 2.3e-15
Identities = 72/258 (27%), Positives = 119/258 (46%)
Query: 169 ICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELE 228
+ Q G +H V L++ G + ++G N+ G LGR + EG + ++ G + E
Sbjct: 69 VVQAEAGGMHTVCLNQSGQVYSFGCNDEGALGRDTSVEGSE---MVPGKVELQ------E 119
Query: 229 KITQVSCGEYHSAAVSENGEVYTWGL--GSVGQLGHCSLQSGDKELLPRRVVALDGIFIK 286
K+ QVS G+ H+AA++E+G V+ WG + G +G L+ K ++P +V LD +K
Sbjct: 120 KVVQVSAGDSHTAALTEDGRVFLWGSFRDNNGVIG--LLEPMKKSMVPVQV-QLDMPVVK 176
Query: 287 DVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIP--ILVVP 344
VA G H LT+ G LY G + GQLG P+ F+ +P +L+
Sbjct: 177 -VASGNDHLVMLTTDGDLYTLGCGEQGQLGRVPEL--FANRGGRQGLERLLVPKCVLLKS 233
Query: 345 NG------VQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEV 398
G Q CG T R+G ++G+G ++Y Q + + P +
Sbjct: 234 RGSRGRVRFQDAFCGAYLTFAISREGHVYGFGLSNYHQLGTPGTASCFIPQNLTSFKNST 293
Query: 399 RKLA--AGGGHSAVLADA 414
+ +GG H + D+
Sbjct: 294 KSWVGFSGGQHHTICMDS 311
Score = 162 (62.1 bits), Expect = 7.8e-09, P = 7.8e-09
Identities = 89/332 (26%), Positives = 142/332 (42%)
Query: 73 HTAAVASDGTLFTWGANEFGQLGDGTEE-GRKHPEKVKQLQSEFVKSISCGAHCTAAIAE 131
H + G + T G + GQLG G RK P V LQ + V++ + G H T + +
Sbjct: 27 HRSHKTEPGLVLTLGQGDVGQLGLGESVLERKKPALVPLLQ-DVVQAEAGGMH-TVCLNQ 84
Query: 132 PRE--NDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQ 189
+ + G L G++ + G + QVS G H AL+E G +
Sbjct: 85 SGQVYSFGCNDEGAL---GRDTSVEGSEMVPGKVELQEKVVQVSAGDSHTAALTEDGRVF 141
Query: 190 AWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEK-ITQVSCGEYHSAAVSENGE 248
WG + G+ GL P +K + +L+ + +V+ G H ++ +G+
Sbjct: 142 LWG--SFRD-NNGVI--GLLEP--MK--KSMVPVQVQLDMPVVKVASGNDHLVMLTTDGD 192
Query: 249 VYTWGLGSVGQLGHC--------SLQSGDKELLPRRVVALD-G----IFIKDVACGGVHS 295
+YT G G GQLG Q ++ L+P+ V+ G + +D CG +
Sbjct: 193 LYTLGCGEQGQLGRVPELFANRGGRQGLERLLVPKCVLLKSRGSRGRVRFQDAFCGAYLT 252
Query: 296 CALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHS 355
A++ +G +Y +G S QLG P T S IP ++ T F+N V G + G
Sbjct: 253 FAISREGHVYGFGLSNYHQLGT-PGTAS-CFIP-QNLTSFKNSTKSWV--GF---SGGQH 304
Query: 356 HTLVYMRDGRIHGWGYNSYG-----QAANEKS 382
HT+ +G+ + G YG + A EKS
Sbjct: 305 HTICMDSEGKAYSLGRAEYGRLGLGEGAEEKS 336
Score = 160 (61.4 bits), Expect = 1.3e-08, P = 1.3e-08
Identities = 51/205 (24%), Positives = 93/205 (45%)
Query: 183 SECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAA 242
+E GL+ G + GQLG G + + P ++ P L+ + Q G H+
Sbjct: 32 TEPGLVLTLGQGDVGQLGLGESVLERKKPALV----------PLLQDVVQAEAGGMHTVC 81
Query: 243 VSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKG 302
++++G+VY++G G LG + G E++P +V + + V+ G H+ ALT G
Sbjct: 82 LNQSGQVYSFGCNDEGALGRDTSVEGS-EMVPGKVELQEKVV--QVSAGDSHTAALTEDG 138
Query: 303 ALYAWGG--SQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVY 360
++ WG G +GL + S++P + ++P++ V A G+ H ++
Sbjct: 139 RVFLWGSFRDNNGVIGLLEPMKK-SMVPVQVQL---DMPVVKV-------ASGNDHLVML 187
Query: 361 MRDGRIHGWGYNSYGQAANEKSTYA 385
DG ++ G GQ +A
Sbjct: 188 TTDGDLYTLGCGEQGQLGRVPELFA 212
Score = 155 (59.6 bits), Expect = 4.6e-08, P = 4.6e-08
Identities = 89/367 (24%), Positives = 143/367 (38%)
Query: 23 IYVWGYNHSGQTGRKGR-ERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDG 81
+Y +G N G GR E +P ++ EL + + ++ G HTAA+ DG
Sbjct: 88 VYSFGCNDEGALGRDTSVEGSEMVPGKV--EL-------QEKVVQVSAGDSHTAALTEDG 138
Query: 82 TLFTWGA--NEFGQLGDGTEEGRKHPEKVK-QLQSEFVKSISCGAHCTAAIAEPRENDGT 138
+F WG+ + G +G E +K V+ QL VK S H DG
Sbjct: 139 RVFLWGSFRDNNGVIGL-LEPMKKSMVPVQVQLDMPVVKVASGNDHLVMLTT-----DGD 192
Query: 139 ISTSRLWVWGQNQGSNFPRLFWGA---------FTPNTIICQ------------VSCGSV 177
+ T L Q Q P LF P ++ + CG+
Sbjct: 193 LYT--LGCGEQGQLGRVPELFANRGGRQGLERLLVPKCVLLKSRGSRGRVRFQDAFCGAY 250
Query: 178 HVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGE 237
A+S G + +G + Y QLG G + + F + + S G+
Sbjct: 251 LTFAISREGHVYGFGLSNYHQLGT----PGTASCFIPQNLTSFKNST---KSWVGFSGGQ 303
Query: 238 YHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKEL-LPRRVVALDGIFIKDVACGGVHSC 296
+H+ + G+ Y+ G G+LG L G +E +P + L + VACG
Sbjct: 304 HHTICMDSEGKAYSLGRAEYGRLG---LGEGAEEKSIPTLISRLP--VVSSVACGASVGY 358
Query: 297 ALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSH 356
A++ G ++AWG QLG G ++S + + N +L V +G Q H
Sbjct: 359 AVSKDGRVFAWGMGTNYQLGTGQDEDAWSPV-EMTGKQLENRVVLTVSSGGQ-------H 410
Query: 357 TLVYMRD 363
T++ ++D
Sbjct: 411 TVLLVKD 417
Score = 133 (51.9 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 71/261 (27%), Positives = 107/261 (40%)
Query: 212 RVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKE 271
R+ K + D P+ +K+ +VS H + +E G V T G G VGQLG G+
Sbjct: 5 RIAKRRSPPEDAIPKSKKV-KVS----HRSHKTEPGLVLTLGQGDVGQLG-----LGES- 53
Query: 272 LLPRRVVALDGIFIKDVA---CGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIP 328
+L R+ AL + ++DV GG+H+ L G +Y++G + G LG ++P
Sbjct: 54 VLERKKPALVPL-LQDVVQAEAGGMHTVCLNQSGQVYSFGCNDEGALGRDTSVEGSEMVP 112
Query: 329 NESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGY---NSYGQAANEKSTYA 385
+ + + V V+ G SHT DGR+ WG N+ E +
Sbjct: 113 GKVE----------LQEKVVQVSAGDSHTAALTEDGRVFLWGSFRDNNGVIGLLEPMKKS 162
Query: 386 WYPSPVDWCVGEVRKLAAGGGHSAVLADACSLKEL-CEFRLAESVTLSNASEI-EDVASR 443
P V + V K+A+G H +L L L C E L E+ + R
Sbjct: 163 MVPVQVQLDMPVV-KVASGNDHLVMLTTDGDLYTLGC----GEQGQLGRVPELFANRGGR 217
Query: 444 TGSEAL-ARLCERLREHSLHG 463
G E L C L+ G
Sbjct: 218 QGLERLLVPKCVLLKSRGSRG 238
>UNIPROTKB|A6NED2 [details] [associations]
symbol:RCCD1 "RCC1 domain-containing protein 1"
species:9606 "Homo sapiens" [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0005886 "plasma membrane" evidence=IDA] INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005886 GO:GO:0005737 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 EMBL:CH471101 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 EMBL:AC068831
EMBL:BC113826 EMBL:BC140708 EMBL:BC140709 IPI:IPI00399158
RefSeq:NP_001017919.1 RefSeq:NP_291022.2 UniGene:Hs.655895
ProteinModelPortal:A6NED2 SMR:A6NED2 STRING:A6NED2
PhosphoSite:A6NED2 PaxDb:A6NED2 PRIDE:A6NED2
Ensembl:ENST00000394258 Ensembl:ENST00000556618 GeneID:91433
KEGG:hsa:91433 UCSC:uc002bqj.3 CTD:91433 GeneCards:GC15P091498
HGNC:HGNC:30457 HPA:HPA039683 HPA:HPA040776 neXtProt:NX_A6NED2
PharmGKB:PA142671092 eggNOG:NOG305770 HOGENOM:HOG000154085
HOVERGEN:HBG061852 InParanoid:A6NED2 OMA:ERPGAWF OrthoDB:EOG41NTMF
PhylomeDB:A6NED2 GenomeRNAi:91433 NextBio:77244 ArrayExpress:A6NED2
Bgee:A6NED2 CleanEx:HS_RCCD1 Genevestigator:A6NED2 Uniprot:A6NED2
Length = 376
Score = 188 (71.2 bits), Expect = 4.2e-18, Sum P(2) = 4.2e-18
Identities = 42/102 (41%), Positives = 64/102 (62%)
Query: 224 APELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGI 283
APEL + Q+ G H+ + G+V++WG G GQLGH +L++ EL PR + AL G+
Sbjct: 155 APEL-RARQLELGAEHALLLDAAGQVFSWGGGRHGQLGHGTLEA---ELEPRLLEALQGL 210
Query: 284 FIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFS 325
+ +VA GG HS ++ G +Y WG +++GQL L P TR+ +
Sbjct: 211 VMAEVAAGGWHSVCVSETGDIYIWGWNESGQLAL-P-TRNLA 250
Score = 151 (58.2 bits), Expect = 8.6e-14, Sum P(2) = 8.6e-14
Identities = 79/282 (28%), Positives = 112/282 (39%)
Query: 22 AIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDG 81
A + +G+ GQ GR RQ+ P L + C A+ W +TA V G
Sbjct: 8 AWFGFGFCGFGQELGSGRGRQVHSPSPLRAGVDICRVSAS--W-------SYTAFVTRGG 58
Query: 82 TLFTWGA--NEFGQLGDG-TEEG-----RKHPEKVKQLQSEFVKSISCGAHCTAAIAEPR 133
L G+ G+ D EG R P LQ +S G A P
Sbjct: 59 RLELSGSASGAAGRCKDAWASEGLLAVLRAGPGPEALLQVWAAESALRGEPLWAQNVVPE 118
Query: 134 ---END--GTISTSRLWVWGQNQGSNFPRL-FWGAFTPNTIICQVSCGSVHVVALSECGL 187
E+D G RL + + PR F+ P Q+ G+ H + L G
Sbjct: 119 AEGEDDPAGEAQAGRLPLLPCARAYVSPRAPFYRPLAPELRARQLELGAEHALLLDAAGQ 178
Query: 188 LQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENG 247
+ +WG +GQLG G T E PR++ EA + + +V+ G +HS VSE G
Sbjct: 179 VFSWGGGRHGQLGHG-TLEAELEPRLL--------EALQGLVMAEVAAGGWHSVCVSETG 229
Query: 248 EVYTWGLGSVGQLGHCSLQ-SGDKELLPRRVVAL--DGIFIK 286
++Y WG GQL + + D E + R L DG +K
Sbjct: 230 DIYIWGWNESGQLALPTRNLAEDGETVAREATELNEDGSQVK 271
Score = 137 (53.3 bits), Expect = 7.5e-11, Sum P(2) = 7.5e-11
Identities = 41/108 (37%), Positives = 56/108 (51%)
Query: 189 QAWGYNEYG-QLGR-GITCEGLQGPRV-IKGYAKFLDEAPELEKITQVSCGEYHSAAVSE 245
+A NE G Q+ R G +G P + ++ + LD P + SCG H+A V+
Sbjct: 259 EATELNEDGSQVKRTGGAEDGAPAPFIAVQPFPALLD-LPMGSDAVKASCGSRHTAVVTR 317
Query: 246 NGEVYTWGLGSVGQLGHCSLQSGDKELLPRRV-VALDG-IFIKDVACG 291
GE+YTWG G GQLGH S D+ PRRV +D + +K V CG
Sbjct: 318 TGELYTWGWGKYGQLGHEDTTSLDR---PRRVEYFVDKQLQVKAVTCG 362
Score = 123 (48.4 bits), Expect = 0.00013, P = 0.00013
Identities = 29/77 (37%), Positives = 41/77 (53%)
Query: 51 PELFGCPAGANSRWLDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKV-- 108
P L P G+++ + +CG HTA V G L+TWG ++GQLG P +V
Sbjct: 291 PALLDLPMGSDA--VKASCGSRHTAVVTRTGELYTWGWGKYGQLGHEDTTSLDRPRRVEY 348
Query: 109 ---KQLQSEFVKSISCG 122
KQLQ VK+++CG
Sbjct: 349 FVDKQLQ---VKAVTCG 362
Score = 103 (41.3 bits), Expect = 4.9e-07, Sum P(2) = 4.9e-07
Identities = 26/79 (32%), Positives = 44/79 (55%)
Query: 171 QVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKI 230
+ SCGS H ++ G L WG+ +YGQLG T L PR ++ Y F+D+ +++ +
Sbjct: 304 KASCGSRHTAVVTRTGELYTWGWGKYGQLGHEDTTS-LDRPRRVE-Y--FVDKQLQVKAV 359
Query: 231 TQVSCGEYHSAAVS-ENGE 248
T CG +++ + E G+
Sbjct: 360 T---CGPWNTYVYAVEKGK 375
Score = 100 (40.3 bits), Expect = 4.2e-18, Sum P(2) = 4.2e-18
Identities = 25/78 (32%), Positives = 40/78 (51%)
Query: 340 ILVVPNGVQLV--ACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG- 396
+L +P G V +CG HT V R G ++ WG+ YGQ +E +T P V++ V
Sbjct: 293 LLDLPMGSDAVKASCGSRHTAVVTRTGELYTWGWGKYGQLGHEDTTSLDRPRRVEYFVDK 352
Query: 397 --EVRKLAAGGGHSAVLA 412
+V+ + G ++ V A
Sbjct: 353 QLQVKAVTCGPWNTYVYA 370
Score = 87 (35.7 bits), Expect = 7.5e-11, Sum P(2) = 7.5e-11
Identities = 28/98 (28%), Positives = 42/98 (42%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
+ A ++ WG GQ G E +L P+ L L G ++A G H+
Sbjct: 173 LDAAGQVFSWGGGRHGQLGHGTLEAELE-PRLLEA-LQGLVMA------EVAAGGWHSVC 224
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSE 114
V+ G ++ WG NE GQL T + E V + +E
Sbjct: 225 VSETGDIYIWGWNESGQLALPTRNLAEDGETVAREATE 262
Score = 84 (34.6 bits), Expect = 3.9e-12, Sum P(2) = 3.9e-12
Identities = 25/72 (34%), Positives = 34/72 (47%)
Query: 289 ACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQ 348
+CG H+ +T G LY WG + GQLG T S P + YF + + V +
Sbjct: 306 SCGSRHTAVVTRTGELYTWGWGKYGQLG-HEDTTSLDR-PRRVE-YFVDKQLQV-----K 357
Query: 349 LVACGHSHTLVY 360
V CG +T VY
Sbjct: 358 AVTCGPWNTYVY 369
>ZFIN|ZDB-GENE-040426-2213 [details] [associations]
symbol:rcc2 "regulator of chromosome condensation
2" species:7955 "Danio rerio" [GO:0003674 "molecular_function"
evidence=ND] [GO:0051301 "cell division" evidence=IEA] [GO:0007067
"mitosis" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] INTERPRO:IPR000408 Pfam:PF00415
ZFIN:ZDB-GENE-040426-2213 GO:GO:0005730 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
eggNOG:COG5184 GeneTree:ENSGT00700000104160 EMBL:BC066628
IPI:IPI00486648 RefSeq:NP_998341.1 UniGene:Dr.828
ProteinModelPortal:Q6NYE2 STRING:Q6NYE2 PRIDE:Q6NYE2
Ensembl:ENSDART00000010647 GeneID:406455 KEGG:dre:406455 CTD:55920
HOGENOM:HOG000232061 HOVERGEN:HBG080538 InParanoid:Q6NYE2
OMA:FGENKLG OrthoDB:EOG4DNF4B NextBio:20818048 ArrayExpress:Q6NYE2
Bgee:Q6NYE2 Uniprot:Q6NYE2
Length = 495
Score = 246 (91.7 bits), Expect = 4.4e-18, P = 4.4e-18
Identities = 108/430 (25%), Positives = 184/430 (42%)
Query: 17 IP-AKSAIYVWGYNHSGQTGRKGRERQLRIPKQLP-----PELFGCPAGAN-SRWLDIAC 69
+P K + ++G + GRK +Q + L P +GC + S + C
Sbjct: 72 VPKVKGQLLIFGATNWDLIGRKEVPKQQAAFRNLGQNLWGPHRYGCLSDVQVSCVVSGPC 131
Query: 70 GHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAI 129
H+ + ++G L++WG N+ GQLG G + + P+ ++ L E + + +CG + T A+
Sbjct: 132 A-AHSLIITTEGKLWSWGRNDKGQLGHGDTKRLEAPKLIEGLGEEVIVAAACGRNHTLAL 190
Query: 130 AEPRENDGTISTSRLWVWGQ-NQGSNFPRLFWGA---FTPNTIICQVSCGSVHVVALSEC 185
E +GT+ T GQ QG+ + A + I+ +V+CG+ + +
Sbjct: 191 TE----NGTVYTFGENKLGQLGQGNQTDAVLSPATIQYNGQPIV-KVACGAEFSMIVDCK 245
Query: 186 GLLQAWGYNEYGQLGRGITCEGLQGPRVI--------KGYAKFLDEAPELEKIT------ 231
G L ++G EYGQLG + + + I + A F+++ + + +
Sbjct: 246 GNLYSFGCPEYGQLGHNSDGKFIARAQRIEFDCELIPRRVAIFIEKTKDGQVLPVPNVVA 305
Query: 232 -QVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALD--GIFIKDV 288
V+CG H+ + V++WG G G+LGH + E++PR V D G +
Sbjct: 306 RDVACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKD---EMVPRLVKLFDFPGRGATQI 362
Query: 289 ACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQ 348
CG S AL+ G L+ WG + + ES Y + + L ++
Sbjct: 363 YCGYQCSFALSEMGGLFFWGVTNTSR---------------ESTMYPKAVQDLCGWK-IR 406
Query: 349 LVACGHSHTLVYMRDGRIHGWGYN------SYGQAANEKSTYAWYPSPVDWCVGEVRKLA 402
+ACG S +V D I WG + YG + ST A +D E ++
Sbjct: 407 SLACGKSSIIVAADDSTI-SWGPSPTFGELGYGDNKPKSSTTAQEVKTLDGVYSE--QVV 463
Query: 403 AGGGHSAVLA 412
G HS V+A
Sbjct: 464 MGYSHSLVIA 473
Score = 236 (88.1 bits), Expect = 6.0e-17, P = 6.0e-17
Identities = 91/309 (29%), Positives = 134/309 (43%)
Query: 139 ISTS-RLWVWGQNQGSNF----------PRLFWGAFTPNTIICQVSCGSVHVVALSECGL 187
I+T +LW WG+N P+L G +I +CG H +AL+E G
Sbjct: 138 ITTEGKLWSWGRNDKGQLGHGDTKRLEAPKLIEGL--GEEVIVAAACGRNHTLALTENGT 195
Query: 188 LQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENG 247
+ +G N+ GQLG+G + + P I+ Y + P I +V+CG S V G
Sbjct: 196 VYTFGENKLGQLGQGNQTDAVLSPATIQ-Y----NGQP----IVKVACGAEFSMIVDCKG 246
Query: 248 EVYTWGLGSVGQLGHCS-------LQ--SGDKELLPRRVVAL-----DG-------IFIK 286
+Y++G GQLGH S Q D EL+PRRV DG + +
Sbjct: 247 NLYSFGCPEYGQLGHNSDGKFIARAQRIEFDCELIPRRVAIFIEKTKDGQVLPVPNVVAR 306
Query: 287 DVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPN- 345
DVACG H+ L S+ +++WG G+LG Q ++P R + + P
Sbjct: 307 DVACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKDE--MVP-------RLVKLFDFPGR 357
Query: 346 GVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPV-DWCVGEVRKLAAG 404
G + CG+ + G + WG + + +ST YP V D C ++R LA G
Sbjct: 358 GATQIYCGYQCSFALSEMGGLFFWGVTN----TSRESTM--YPKAVQDLCGWKIRSLACG 411
Query: 405 GGHSAVLAD 413
V AD
Sbjct: 412 KSSIIVAAD 420
Score = 193 (73.0 bits), Expect = 3.9e-12, P = 3.9e-12
Identities = 99/371 (26%), Positives = 154/371 (41%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
I + ++ WG N GQ G G ++L PK + E G + ACG HT A
Sbjct: 138 ITTEGKLWSWGRNDKGQLGH-GDTKRLEAPKLI--EGLG-----EEVIVAAACGRNHTLA 189
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND 136
+ +GT++T+G N+ GQLG G + Q + + ++CGA + I + + N
Sbjct: 190 LTENGTVYTFGENKLGQLGQGNQTDAVLSPATIQYNGQPIVKVACGAEFSM-IVDCKGNL 248
Query: 137 GTISTSRLWVWGQNQGSNF----PRL-FWGAFTPNTI---ICQVSCGSV----HVVALS- 183
+ G N F R+ F P + I + G V +VVA
Sbjct: 249 YSFGCPEYGQLGHNSDGKFIARAQRIEFDCELIPRRVAIFIEKTKDGQVLPVPNVVARDV 308
Query: 184 ECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDE-APELEKI--------TQVS 234
CG + + + G G + G+A+ DE P L K+ TQ+
Sbjct: 309 ACGANHTLVLDSQ----KRVFSWGFGGYGRL-GHAEQKDEMVPRLVKLFDFPGRGATQIY 363
Query: 235 CGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVH 294
CG S A+SE G ++ WG+ + S + + P+ V L G I+ +ACG
Sbjct: 364 CGYQCSFALSEMGGLFFWGVTNT---------SRESTMYPKAVQDLCGWKIRSLACGK-S 413
Query: 295 SCALTSKGALYAWGGSQA-GQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGV--QLVA 351
S + + + +WG S G+LG G P S T + + L +GV + V
Sbjct: 414 SIIVAADDSTISWGPSPTFGELGYGDNK------PKSSTTA-QEVKTL---DGVYSEQVV 463
Query: 352 CGHSHTLVYMR 362
G+SH+LV R
Sbjct: 464 MGYSHSLVIAR 474
>RGD|1563497 [details] [associations]
symbol:Sergef "secretion regulating guanine nucleotide exchange
factor" species:10116 "Rattus norvegicus" [GO:0005634 "nucleus"
evidence=ISO] [GO:0005730 "nucleolus" evidence=IEA;ISO] [GO:0005737
"cytoplasm" evidence=IEA;ISO] [GO:0045111 "intermediate filament
cytoskeleton" evidence=IEA;ISO] [GO:0050709 "negative regulation of
protein secretion" evidence=IEA;ISO] InterPro:IPR027048 RGD:1563497
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005730 GO:GO:0045111
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 GO:GO:0050709
GeneTree:ENSGT00700000104160 OrthoDB:EOG4J1183
PANTHER:PTHR22870:SF7 IPI:IPI00360920 Ensembl:ENSRNOT00000015352
UCSC:RGD:1563497 Uniprot:D3ZN16
Length = 339
Score = 237 (88.5 bits), Expect = 4.5e-18, P = 4.5e-18
Identities = 92/321 (28%), Positives = 139/321 (43%)
Query: 68 ACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQL-QSEFVKSISCGAHCT 126
+C E AV++ LF WGAN +GQLG G +E P+++ +S +KS++ G +
Sbjct: 5 SCASE---AVSAAAVLFAWGANSYGQLGLGHKEDVLLPQQLSDFCKSGCIKSVTGGGGHS 61
Query: 127 AAIAEPRENDGTISTSRLWVWGQ-NQGSNFPRLFWGAFTP--NTIICQVSCGSVHVVALS 183
+ + G + L GQ G L + P I QV+CG + L+
Sbjct: 62 VVVTD----GGGLFVCGLNKDGQLGLGHTEEVLRFTICKPLLGCPIRQVACGWDFTIMLT 117
Query: 184 ECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPEL--EKITQVSCGEYHSA 241
E G + + G N +GQLG GPR + +A E EK+ V+ G H+
Sbjct: 118 EKGQVLSCGSNAFGQLGVP------HGPRKC-----VVPQAIECLREKVVCVAAGLRHAL 166
Query: 242 AVSENGEVYTWGLGSVGQLGH--CSLQSGDKELL---PRRVVALDGIFIKDVACGGVHSC 296
A ++ G + WG G + G C Q+ L P RV L+ + G HS
Sbjct: 167 ATTDTGSTFQWGTG-LASSGRRLCPGQNLPLFLTAKEPSRVTGLESSTVVCAVAGSDHSA 225
Query: 297 ALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDT-YFRNIPILVVPNGVQLVACGHS 355
+LT G LY WG ++ GQL +F +P + YF++ V V G +
Sbjct: 226 SLTDTGELYVWGRNKHGQLA---SLATFLPLPQRVEAHYFQD-------EKVTAVWSGWT 275
Query: 356 HTLVYMRDGRIHGWGYNSYGQ 376
H + G++ WG YGQ
Sbjct: 276 HLVAKTETGKVFTWGRADYGQ 296
Score = 231 (86.4 bits), Expect = 3.0e-17, P = 3.0e-17
Identities = 94/311 (30%), Positives = 133/311 (42%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
+ A + ++ WG N GQ G G + + +P+QL F C +G + G H+
Sbjct: 11 VSAAAVLFAWGANSYGQLGL-GHKEDVLLPQQLSD--F-CKSGCIK---SVTGGGGHSVV 63
Query: 77 VASDGTLFTWGANEFGQLGDG-TEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREN 135
V G LF G N+ GQLG G TEE + K L ++ ++CG T + E
Sbjct: 64 VTDGGGLFVCGLNKDGQLGLGHTEEVLRFTI-CKPLLGCPIRQVACGWDFTIMLTEK--- 119
Query: 136 DGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIIC---QVSC---GSVHVVALSECGLLQ 189
G + + +GQ + PR P I C +V C G H +A ++ G
Sbjct: 120 -GQVLSCGSNAFGQLGVPHGPRK---CVVPQAIECLREKVVCVAAGLRHALATTDTGSTF 175
Query: 190 AWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSC--GEYHSAAVSENG 247
WG GR + C G P + AK LE T V G HSA++++ G
Sbjct: 176 QWGTG-LASSGRRL-CPGQNLPLFLT--AKEPSRVTGLESSTVVCAVAGSDHSASLTDTG 231
Query: 248 EVYTWGLGSVGQLGHCSLQSGDKELLPRRVVA--LDGIFIKDVACGGVHSCALTSKGALY 305
E+Y WG GQL SL + LP+RV A + V G H A T G ++
Sbjct: 232 ELYVWGRNKHGQLA--SLATFLP--LPQRVEAHYFQDEKVTAVWSGWTHLVAKTETGKVF 287
Query: 306 AWGGSQAGQLG 316
WG + GQLG
Sbjct: 288 TWGRADYGQLG 298
Score = 153 (58.9 bits), Expect = 4.8e-08, P = 4.8e-08
Identities = 77/255 (30%), Positives = 101/255 (39%)
Query: 173 SCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQ 232
SC S A+S +L AWG N YGQLG G E + P+ + + K I
Sbjct: 5 SCASE---AVSAAAVLFAWGANSYGQLGLGHK-EDVLLPQQLSDFCKS-------GCIKS 53
Query: 233 VSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVA--LDGIFIKDVAC 290
V+ G HS V++ G ++ GL GQLG G E + R + L G I+ VAC
Sbjct: 54 VTGGGGHSVVVTDGGGLFVCGLNKDGQLG-----LGHTEEVLRFTICKPLLGCPIRQVAC 108
Query: 291 GGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLV 350
G + LT KG + + G + GQLG+ P ++P I + V V
Sbjct: 109 GWDFTIMLTEKGQVLSCGSNAFGQLGV-PHGPRKCVVPQA---------IECLREKVVCV 158
Query: 351 ACGHSHTLVYMRDGRIHGWGYN--SYGQAANEKSTYAWY-----PSPVDWCVGEVRKLA- 402
A G H L G WG S G+ + PS V A
Sbjct: 159 AAGLRHALATTDTGSTFQWGTGLASSGRRLCPGQNLPLFLTAKEPSRVTGLESSTVVCAV 218
Query: 403 AGGGHSAVLADACSL 417
AG HSA L D L
Sbjct: 219 AGSDHSASLTDTGEL 233
Score = 149 (57.5 bits), Expect = 1.4e-07, P = 1.4e-07
Identities = 68/236 (28%), Positives = 103/236 (43%)
Query: 163 FTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLD 222
F + I V+ G H V +++ G L G N+ GQLG G T E L+ K L
Sbjct: 45 FCKSGCIKSVTGGGGHSVVVTDGGGLFVCGLNKDGQLGLGHTEEVLRFT-----ICKPLL 99
Query: 223 EAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKE-LLPRRVVALD 281
P I QV+CG + ++E G+V + G + GQLG + G ++ ++P+ + L
Sbjct: 100 GCP----IRQVACGWDFTIMLTEKGQVLSCGSNAFGQLG---VPHGPRKCVVPQAIECLR 152
Query: 282 GIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNI--P 339
+ VA G H+ A T G+ + WG GL R L P ++ F P
Sbjct: 153 EKVVC-VAAGLRHALATTDTGSTFQWG------TGLASSGRR--LCPGQNLPLFLTAKEP 203
Query: 340 ILVVPNGVQLVAC---GHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVD 392
V V C G H+ G ++ WG N +GQ A+ +T+ P V+
Sbjct: 204 SRVTGLESSTVVCAVAGSDHSASLTDTGELYVWGRNKHGQLAS-LATFLPLPQRVE 258
Score = 118 (46.6 bits), Expect = 0.00039, P = 0.00039
Identities = 46/191 (24%), Positives = 70/191 (36%)
Query: 20 KSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVAS 79
K + G N GQ G R+ +P+ + C + + +A G H A
Sbjct: 119 KGQVLSCGSNAFGQLGVPHGPRKCVVPQAIE-----C---LREKVVCVAAGLRHALATTD 170
Query: 80 DGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTI 139
G+ F WG G G+ P + + V + A+A +
Sbjct: 171 TGSTFQWGTG-LASSGRRLCPGQNLPLFLTAKEPSRVTGLESST-VVCAVAGSDHSASLT 228
Query: 140 STSRLWVWGQNQGSNFPRLFWGAFTPNTI---------ICQVSCGSVHVVALSECGLLQA 190
T L+VWG+N+ L P + + V G H+VA +E G +
Sbjct: 229 DTGELYVWGRNKHGQLASLATFLPLPQRVEAHYFQDEKVTAVWSGWTHLVAKTETGKVFT 288
Query: 191 WGYNEYGQLGR 201
WG +YGQLGR
Sbjct: 289 WGRADYGQLGR 299
>UNIPROTKB|G3V1B4 [details] [associations]
symbol:SERGEF "Secretion-regulating guanine nucleotide
exchange factor" species:9606 "Homo sapiens" [GO:0050709 "negative
regulation of protein secretion" evidence=IEA] InterPro:IPR027048
INTERPRO:IPR000408 Pfam:PF00415 EMBL:CH471064 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 PANTHER:PTHR22870:SF7 UniGene:Hs.32470
HGNC:HGNC:17499 EMBL:AC055860 EMBL:AC124058 EMBL:AC124078
ProteinModelPortal:G3V1B4 SMR:G3V1B4 Ensembl:ENST00000525422
ArrayExpress:G3V1B4 Bgee:G3V1B4 Uniprot:G3V1B4
Length = 354
Score = 239 (89.2 bits), Expect = 4.8e-18, P = 4.8e-18
Identities = 85/303 (28%), Positives = 131/303 (43%)
Query: 18 PAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAV 77
PA +A++ WG N GQ G G + + +P+QL F C + R I G H+A V
Sbjct: 12 PAAAALFAWGANSYGQLGL-GHKEDVLLPQQLND--F-CKPRSVRR---ITGGGGHSAVV 64
Query: 78 ASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRE--N 135
G LF G N+ GQLG G E + K L ++ ++CG T + E + +
Sbjct: 65 TDGGDLFVCGLNKDGQLGLGHTEDIPYFTPCKSLFGCPIQQVACGWDFTIMLTENGQVLS 124
Query: 136 DGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNE 195
G+ S +L V + P+ ++C ++ G H VA + G++ WG
Sbjct: 125 CGSNSFGQLGVPHGPRRCVVPQAI--ELHKEKVVC-IAAGLRHAVAATASGIVFQWGTG- 180
Query: 196 YGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLG 255
GR + C G P E K V G HSA++++ GEVY WG
Sbjct: 181 LASCGRRL-CPGQTLPLFFTAKEPSRVTGLENSKAMCVLAGSDHSASLTDAGEVYVWGSN 239
Query: 256 SVGQLGHCSLQSGDKELLPRRVVA--LDGIFIKDVACGGVHSCALTSKGALYAWGGSQAG 313
GQL + ++ + P+++ A + + G H A T G ++ WG + G
Sbjct: 240 KHGQLAN---EAAFLPV-PQKIEAHCFQNEKVTAIWSGWTHLVAQTETGKMFTWGRADYG 295
Query: 314 QLG 316
QLG
Sbjct: 296 QLG 298
Score = 238 (88.8 bits), Expect = 6.4e-18, P = 6.4e-18
Identities = 93/328 (28%), Positives = 144/328 (43%)
Query: 76 AVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQL-QSEFVKSISCGAHCTAAIAEPRE 134
A + LF WGAN +GQLG G +E P+++ + V+ I+ G +A + +
Sbjct: 10 AAPAAAALFAWGANSYGQLGLGHKEDVLLPQQLNDFCKPRSVRRITGGGGHSAVVTD--- 66
Query: 135 NDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTII--C---QVSCGSVHVVALSECGLLQ 189
G + L GQ + + + FTP + C QV+CG + L+E G +
Sbjct: 67 -GGDLFVCGLNKDGQLGLGHTEDIPY--FTPCKSLFGCPIQQVACGWDFTIMLTENGQVL 123
Query: 190 AWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPEL--EKITQVSCGEYHSAAVSENG 247
+ G N +GQLG GPR + +A EL EK+ ++ G H+ A + +G
Sbjct: 124 SCGSNSFGQLGVP------HGPRRC-----VVPQAIELHKEKVVCIAAGLRHAVAATASG 172
Query: 248 EVYTWGLGSVGQLGH--CSLQS-----GDKELLPRRVVALDGIFIKDVACGGVHSCALTS 300
V+ WG G + G C Q+ KE P RV L+ V G HS +LT
Sbjct: 173 IVFQWGTG-LASCGRRLCPGQTLPLFFTAKE--PSRVTGLENSKAMCVLAGSDHSASLTD 229
Query: 301 KGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTY-FRNIPILVVPNGVQLVACGHSHTLV 359
G +Y WG ++ GQL +F +P + + + F+N V + G +H +
Sbjct: 230 AGEVYVWGSNKHGQLA---NEAAFLPVPQKIEAHCFQN-------EKVTAIWSGWTHLVA 279
Query: 360 YMRDGRIHGWGYNSYGQAANEKSTY-AW 386
G++ WG YGQ + TY W
Sbjct: 280 QTETGKMFTWGRADYGQLGRKLETYEGW 307
Score = 161 (61.7 bits), Expect = 6.7e-09, P = 6.7e-09
Identities = 72/273 (26%), Positives = 114/273 (41%)
Query: 131 EPRENDGTISTSRLWVWGQNQ------GSN----FPRLFWGAFTPNTIICQVSCGSVHVV 180
EP ++ + + L+ WG N G P+ P ++ +++ G H
Sbjct: 4 EPSASEAAPAAAALFAWGANSYGQLGLGHKEDVLLPQQLNDFCKPRSVR-RITGGGGHSA 62
Query: 181 ALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHS 240
+++ G L G N+ GQLG G T E + P K L P I QV+CG +
Sbjct: 63 VVTDGGDLFVCGLNKDGQLGLGHT-EDI--PYFTP--CKSLFGCP----IQQVACGWDFT 113
Query: 241 AAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTS 300
++ENG+V + G S GQLG + G + + + + L + +A G H+ A T+
Sbjct: 114 IMLTENGQVLSCGSNSFGQLG---VPHGPRRCVVPQAIELHKEKVVCIAAGLRHAVAATA 170
Query: 301 KGALYAWGGSQA--GQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQL-VACGHSHT 357
G ++ WG A G+ QT E + + N + V G H+
Sbjct: 171 SGIVFQWGTGLASCGRRLCPGQTLPLFFTAKEPSR------VTGLENSKAMCVLAGSDHS 224
Query: 358 LVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSP 390
G ++ WG N +GQ ANE A+ P P
Sbjct: 225 ASLTDAGEVYVWGSNKHGQLANEA---AFLPVP 254
Score = 160 (61.4 bits), Expect = 8.7e-09, P = 8.7e-09
Identities = 68/237 (28%), Positives = 100/237 (42%)
Query: 188 LQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENG 247
L AWG N YGQLG G E + P+ + + K P + +++ G HSA V++ G
Sbjct: 17 LFAWGANSYGQLGLGHK-EDVLLPQQLNDFCK-----PR--SVRRITGGGGHSAVVTDGG 68
Query: 248 EVYTWGLGSVGQLGHCSLQSGDKELLP--RRVVALDGIFIKDVACGGVHSCALTSKGALY 305
+++ GL GQLG G E +P +L G I+ VACG + LT G +
Sbjct: 69 DLFVCGLNKDGQLG-----LGHTEDIPYFTPCKSLFGCPIQQVACGWDFTIMLTENGQVL 123
Query: 306 AWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGR 365
+ G + GQLG+ P ++P + + V +A G H + G
Sbjct: 124 SCGSNSFGQLGV-PHGPRRCVVPQAIELHKEK---------VVCIAAGLRHAVAATASGI 173
Query: 366 IHGWGYN--SYGQAANEKSTYAWY-----PSPVDWCVG-EVRKLAAGGGHSAVLADA 414
+ WG S G+ T + PS V + + AG HSA L DA
Sbjct: 174 VFQWGTGLASCGRRLCPGQTLPLFFTAKEPSRVTGLENSKAMCVLAGSDHSASLTDA 230
Score = 139 (54.0 bits), Expect = 2.0e-06, P = 2.0e-06
Identities = 58/183 (31%), Positives = 82/183 (44%)
Query: 240 SAAVSENGEVYTWGLGSVGQLGHCSLQSGDKE--LLPRRVVAL-DGIFIKDVACGGVHSC 296
S A ++ WG S GQLG G KE LLP+++ ++ + GG HS
Sbjct: 8 SEAAPAAAALFAWGANSYGQLG-----LGHKEDVLLPQQLNDFCKPRSVRRITGGGGHSA 62
Query: 297 ALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILV-VPNGVQLVACGHS 355
+T G L+ G ++ GQLGLG T IP YF L P +Q VACG
Sbjct: 63 VVTDGGDLFVCGLNKDGQLGLG-HTED---IP-----YFTPCKSLFGCP--IQQVACGWD 111
Query: 356 HTLVYMRDGRIHGWGYNSYGQ-AANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLADA 414
T++ +G++ G NS+GQ P ++ +V +AAG H AV A A
Sbjct: 112 FTIMLTENGQVLSCGSNSFGQLGVPHGPRRCVVPQAIELHKEKVVCIAAGLRH-AVAATA 170
Query: 415 CSL 417
+
Sbjct: 171 SGI 173
>UNIPROTKB|A7Z018 [details] [associations]
symbol:RCC1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005087 "Ran
guanyl-nucleotide exchange factor activity" evidence=IEA]
[GO:0000794 "condensed nuclear chromosome" evidence=IEA]
[GO:0000790 "nuclear chromatin" evidence=IEA] [GO:0000082 "G1/S
transition of mitotic cell cycle" evidence=IEA] [GO:0051225
"spindle assembly" evidence=IEA] [GO:0042393 "histone binding"
evidence=IEA] [GO:0031965 "nuclear membrane" evidence=IEA]
[GO:0031492 "nucleosomal DNA binding" evidence=IEA] [GO:0007090
"regulation of S phase of mitotic cell cycle" evidence=IEA]
[GO:0007088 "regulation of mitosis" evidence=IEA] [GO:0007059
"chromosome segregation" evidence=IEA] [GO:0007052 "mitotic spindle
organization" evidence=IEA] INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005737 GO:GO:0007088 GO:GO:0007059 GO:GO:0007052
GO:GO:0051225 GO:GO:0000082 GO:GO:0031965 GO:GO:0000790
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0000794
GO:GO:0005087 PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626
PROSITE:PS50012 eggNOG:COG5184 GO:GO:0007090 GO:GO:0031492
GeneTree:ENSGT00700000104160 KO:K11493 CTD:1104
HOGENOM:HOG000234341 HOVERGEN:HBG017712 OrthoDB:EOG4320Z9
EMBL:DAAA02006335 EMBL:BC153215 IPI:IPI00868581
RefSeq:NP_001098878.1 UniGene:Bt.54942 SMR:A7Z018 STRING:A7Z018
Ensembl:ENSBTAT00000032060 GeneID:534142 KEGG:bta:534142
InParanoid:A7Z018 OMA:GTESCFV NextBio:20876286 Uniprot:A7Z018
Length = 422
Score = 241 (89.9 bits), Expect = 9.1e-18, P = 9.1e-18
Identities = 102/367 (27%), Positives = 162/367 (44%)
Query: 70 GHEHTAAVASDGTLFTWGANEFGQLG-DGTEEGRKH-PEKVKQLQSEFVKSISCGAHCTA 127
G HT ++ G ++++G N+ G LG D + EG + P KV LQ + ++ +S G TA
Sbjct: 75 GGMHTVCLSKSGQVYSFGCNDEGALGRDTSVEGSEMVPGKV-DLQEKVIQ-VSAGDSHTA 132
Query: 128 AIAEPRENDGTISTSRLWVWGQNQGSN----FPRLFWGAFTPNTI-----ICQVSCGSVH 178
A+ E DG R+++WG + +N + P + + +V+ G+ H
Sbjct: 133 ALTE----DG-----RVFLWGSFRDNNGVIGLLEPMKKSMVPVQVQLSVPVVKVASGNDH 183
Query: 179 VVALSECGLLQAWGYNEYGQLGRG----ITCEGLQG-PRVIKGYAKFLDEAPELEKIT-- 231
+V L+ G L G E GQLGR G QG R++ L +
Sbjct: 184 LVMLTVDGDLYTLGSGEQGQLGRVPELFANRGGRQGLERLLVPKCVMLKSRGSRGHVRFQ 243
Query: 232 QVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVA-C 290
CG Y + A+S G VY +GL + QLG Q + +P+ + + V
Sbjct: 244 DAFCGAYFTFAISSEGHVYGFGLSNYHQLG---TQGTESCFVPQNLTSFKNSTKSWVGFS 300
Query: 291 GGVH-SCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQL 349
GG H + + S+G Y+ G ++ G+LGLG S +P T +P V
Sbjct: 301 GGQHHTVCMDSEGKAYSLGRAEYGRLGLGEGAEEKS-VP----TLIPRLPT------VSS 349
Query: 350 VACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRK-----LAAG 404
VACG S +DGR+ WG + Q + AW SPV+ ++ +++G
Sbjct: 350 VACGASVGYAVTKDGRVFAWGMGTNYQLGTGQDEDAW--SPVEMTGKQLENRVVLTVSSG 407
Query: 405 GGHSAVL 411
G H+ +L
Sbjct: 408 GQHTVLL 414
Score = 215 (80.7 bits), Expect = 8.8e-15, P = 8.8e-15
Identities = 76/267 (28%), Positives = 120/267 (44%)
Query: 165 PNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEA 224
P I+ Q G +H V LS+ G + ++G N+ G LGR + EG + ++ G
Sbjct: 66 PEDIV-QAEAGGMHTVCLSKSGQVYSFGCNDEGALGRDTSVEGSE---MVPGKVDLQ--- 118
Query: 225 PELEKITQVSCGEYHSAAVSENGEVYTWGL--GSVGQLGHCSLQSGDKELLPRRVVALDG 282
EK+ QVS G+ H+AA++E+G V+ WG + G +G L+ K ++P +V L
Sbjct: 119 ---EKVIQVSAGDSHTAALTEDGRVFLWGSFRDNNGVIG--LLEPMKKSMVPVQV-QLSV 172
Query: 283 IFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILV 342
+K VA G H LT G LY G + GQLG P+ L N + + L+
Sbjct: 173 PVVK-VASGNDHLVMLTVDGDLYTLGSGEQGQLGRVPE-----LFANRGGR--QGLERLL 224
Query: 343 VPNGVQLVA-------------CGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPS 389
VP V L + CG T +G ++G+G ++Y Q + + + P
Sbjct: 225 VPKCVMLKSRGSRGHVRFQDAFCGAYFTFAISSEGHVYGFGLSNYHQLGTQGTESCFVPQ 284
Query: 390 PVDWCVGEVRKLA--AGGGHSAVLADA 414
+ + +GG H V D+
Sbjct: 285 NLTSFKNSTKSWVGFSGGQHHTVCMDS 311
Score = 168 (64.2 bits), Expect = 1.7e-09, P = 1.7e-09
Identities = 91/377 (24%), Positives = 150/377 (39%)
Query: 19 AKSA-IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAV 77
+KS +Y +G N G GR + + + +P ++ + + ++ G HTAA+
Sbjct: 83 SKSGQVYSFGCNDEGALGR---DTSVEGSEMVPGKV-----DLQEKVIQVSAGDSHTAAL 134
Query: 78 ASDGTLFTWGA--NEFGQLGDGTEEGRKHPEKVK-QLQSEFVKSISCGAHCTAAIAEPRE 134
DG +F WG+ + G +G E +K V+ QL VK S H
Sbjct: 135 TEDGRVFLWGSFRDNNGVIGL-LEPMKKSMVPVQVQLSVPVVKVASGNDHLVMLTV---- 189
Query: 135 NDGTISTSRLWVWGQNQGSNFPRLFWGA---------FTPNTIICQ------------VS 173
DG + T L Q Q P LF P ++ +
Sbjct: 190 -DGDLYT--LGSGEQGQLGRVPELFANRGGRQGLERLLVPKCVMLKSRGSRGHVRFQDAF 246
Query: 174 CGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQV 233
CG+ A+S G + +G + Y QLG +G + V + F + +
Sbjct: 247 CGAYFTFAISSEGHVYGFGLSNYHQLGT----QGTESCFVPQNLTSFKNST---KSWVGF 299
Query: 234 SCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKEL-LPRRVVALDGIFIKDVACGG 292
S G++H+ + G+ Y+ G G+LG L G +E +P + L + VACG
Sbjct: 300 SGGQHHTVCMDSEGKAYSLGRAEYGRLG---LGEGAEEKSVPTLIPRLPTV--SSVACGA 354
Query: 293 VHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVAC 352
A+T G ++AWG QLG G ++S + + N +L V +G Q
Sbjct: 355 SVGYAVTKDGRVFAWGMGTNYQLGTGQDEDAWSPV-EMTGKQLENRVVLTVSSGGQ---- 409
Query: 353 GHSHTLVYMRDGRIHGW 369
HT++ ++D + W
Sbjct: 410 ---HTVLLVKD-KEQSW 422
Score = 156 (60.0 bits), Expect = 3.6e-08, P = 3.6e-08
Identities = 86/338 (25%), Positives = 141/338 (41%)
Query: 73 HTAAVASDGTLFTWGANEFGQLGDGTEE-GRKHPEKVKQLQSEFVKSISCGAHCTAAIAE 131
H + G + T G + GQLG G RK P V + + V++ + G H T +++
Sbjct: 27 HRSHGTEPGVVLTLGQGDVGQLGLGENVMERKKPALVS-IPEDIVQAEAGGMH-TVCLSK 84
Query: 132 PRE--NDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQ 189
+ + G L G++ + G + QVS G H AL+E G +
Sbjct: 85 SGQVYSFGCNDEGAL---GRDTSVEGSEMVPGKVDLQEKVIQVSAGDSHTAALTEDGRVF 141
Query: 190 AWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELE-KITQVSCGEYHSAAVSENGE 248
WG + G+ GL P +K + +L + +V+ G H ++ +G+
Sbjct: 142 LWG--SFRD-NNGVI--GLLEP--MK--KSMVPVQVQLSVPVVKVASGNDHLVMLTVDGD 192
Query: 249 VYTWGLGSVGQLGHC--------SLQSGDKELLPRRVVALD-G----IFIKDVACGGVHS 295
+YT G G GQLG Q ++ L+P+ V+ G + +D CG +
Sbjct: 193 LYTLGSGEQGQLGRVPELFANRGGRQGLERLLVPKCVMLKSRGSRGHVRFQDAFCGAYFT 252
Query: 296 CALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHS 355
A++S+G +Y +G S QLG Q +P ++ T F+N V G + G
Sbjct: 253 FAISSEGHVYGFGLSNYHQLGT--QGTESCFVP-QNLTSFKNSTKSWV--GF---SGGQH 304
Query: 356 HTLVYMRDGRIHGWGYNSYG-----QAANEKSTYAWYP 388
HT+ +G+ + G YG + A EKS P
Sbjct: 305 HTVCMDSEGKAYSLGRAEYGRLGLGEGAEEKSVPTLIP 342
Score = 139 (54.0 bits), Expect = 2.8e-06, P = 2.8e-06
Identities = 59/205 (28%), Positives = 89/205 (43%)
Query: 212 RVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKE 271
R+ K + D P+ +K+ +VS H + +E G V T G G VGQLG G+
Sbjct: 5 RIAKRRSPPEDALPKSKKV-KVS----HRSHGTEPGVVLTLGQGDVGQLG-----LGEN- 53
Query: 272 LLPRRVVALDGI--FIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPN 329
++ R+ AL I I GG+H+ L+ G +Y++G + G LG ++P
Sbjct: 54 VMERKKPALVSIPEDIVQAEAGGMHTVCLSKSGQVYSFGCNDEGALGRDTSVEGSEMVPG 113
Query: 330 ESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGY---NSYGQAANEKSTYAW 386
+ D + I V+ G SHT DGR+ WG N+ E +
Sbjct: 114 KVDLQEKVIQ----------VSAGDSHTAALTEDGRVFLWGSFRDNNGVIGLLEPMKKSM 163
Query: 387 YPSPVDWCVGEVRKLAAGGGHSAVL 411
P V V V K+A+G H +L
Sbjct: 164 VPVQVQLSVPVV-KVASGNDHLVML 187
Score = 135 (52.6 bits), Expect = 7.7e-06, P = 7.7e-06
Identities = 47/178 (26%), Positives = 83/178 (46%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
I ++ +Y +G ++ Q G +G E +P+ L F + W+ + G HT
Sbjct: 255 ISSEGHVYGFGLSNYHQLGTQGTESCF-VPQNLTS--F---KNSTKSWVGFSGGQHHTVC 308
Query: 77 VASDGTLFTWGANEFGQLG--DGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEP-R 133
+ S+G ++ G E+G+LG +G EE + P + +L + V S++CGA A+ + R
Sbjct: 309 MDSEGKAYSLGRAEYGRLGLGEGAEE-KSVPTLIPRLPT--VSSVACGASVGYAVTKDGR 365
Query: 134 ENDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAW 191
+ T+ GQ++ + P G N ++ VS G H V L + Q+W
Sbjct: 366 VFAWGMGTNYQLGTGQDEDAWSPVEMTGKQLENRVVLTVSSGGQHTVLLVK-DKEQSW 422
>UNIPROTKB|F1S2Q4 [details] [associations]
symbol:NEK9 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0019901 "protein kinase binding" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004674 "protein serine/threonine kinase
activity" evidence=IEA] InterPro:IPR000719 InterPro:IPR002290
InterPro:IPR008271 InterPro:IPR011009 Pfam:PF00069 PROSITE:PS00108
PROSITE:PS50011 SMART:SM00220 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005739 GO:GO:0005524 SUPFAM:SSF56112 GO:GO:0004674
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PROSITE:PS50012 GeneTree:ENSGT00700000104074 OMA:GCDGTFL
EMBL:CT737372 Ensembl:ENSSSCT00000002648 Uniprot:F1S2Q4
Length = 1004
Score = 248 (92.4 bits), Expect = 1.1e-17, P = 1.1e-17
Identities = 111/433 (25%), Positives = 180/433 (41%)
Query: 10 TARPVDNIPAK-SAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIA 68
T P+ + ++ S +YVWG G K ++L + K GC A +
Sbjct: 354 TETPIAVVTSRTSEVYVWG-------GGKSTPQKLDVIKS------GCSAR------QVC 394
Query: 69 CGHEHTAAVASDGTLFTW-----GANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGA 123
G+ H A V + L+TW G GQLG G + + P+ V++LQ + ++ +SCG
Sbjct: 395 AGNTHFAVVTVEKELYTWVNMQGGTKLHGQLGHGDKASYRQPKHVEKLQGKAIRQVSCGD 454
Query: 124 HCTAAIAEPRENDGTISTSRLWVWGQNQ--GSNFPRLFWGAFTPNTIICQVSCGSVHVVA 181
T + + + + G ++ G F N + QVSCG HVV
Sbjct: 455 DFTVCVTDEGQLYA-FGSDYYGCMGVDKVAGPEVLEPMQLNFFSNNPVEQVSCGDNHVVV 513
Query: 182 LSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSA 241
L+ + +WG EYG+LG E P+ + + P+ I V CG +
Sbjct: 514 LTRNKEVYSWGCGEYGRLGLDSE-EDYYTPQKV--------DVPKALIIVAVQCGCDGTF 564
Query: 242 AVSENGEVYTWGLGSVGQLGHCSLQSG--DKEL---LPRRV---VALDGIF--IKDVACG 291
++++G+V GL +LG SG + E +P +A F I+ VA G
Sbjct: 565 LLTQSGKVLACGLNEFNKLGLNQCMSGIINHEAYHEVPYTTSFTLAKQLSFYKIRTVAPG 624
Query: 292 GVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVP-NGVQL- 349
H+ A+ +G L +G ++ GQLG+G + I +L P G Q+
Sbjct: 625 KTHTAAIDERGRLLTFGCNKCGQLGVGNYKKRLG------------INLLGGPLGGKQVI 672
Query: 350 -VACGHSHTLVYMRDGRIHGWGYNSYGQAA---NEKS-----TYAWYPSPVDWCVGEVRK 400
V+CG T+ D I WG G+ A E+ +W P P+ + V
Sbjct: 673 RVSCGDEFTIAATDDNHIFAWGNGGNGRLAMTPTERPHGSDICTSW-PRPIFGSLHHVPD 731
Query: 401 LAAGGGHSAVLAD 413
L+ G H+ ++ +
Sbjct: 732 LSCRGWHTILIVE 744
Score = 158 (60.7 bits), Expect = 8.3e-08, P = 8.3e-08
Identities = 66/278 (23%), Positives = 120/278 (43%)
Query: 67 IACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCT 126
++CG H + + +++WG E+G+LG +EE P+KV ++ + ++ CG T
Sbjct: 504 VSCGDNHVVVLTRNKEVYSWGCGEYGRLGLDSEEDYYTPQKVDVPKALIIVAVQCGCDGT 563
Query: 127 AAIAEPRE--NDGTISTSRLWVWGQNQ---GS-NFPRLFWGAFTPN-TIICQVSC----- 174
+ + + G ++L G NQ G N +T + T+ Q+S
Sbjct: 564 FLLTQSGKVLACGLNEFNKL---GLNQCMSGIINHEAYHEVPYTTSFTLAKQLSFYKIRT 620
Query: 175 ---GSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKIT 231
G H A+ E G L +G N+ GQLG G + L G ++ G +++
Sbjct: 621 VAPGKTHTAAIDERGRLLTFGCNKCGQLGVGNYKKRL-GINLLGGPLGG-------KQVI 672
Query: 232 QVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELL----PRRVVALDGIFIKD 287
+VSCG+ + A +++ ++ WG G G+L + + PR + + D
Sbjct: 673 RVSCGDEFTIAATDDNHIFAWGNGGNGRLAMTPTERPHGSDICTSWPRPIFG-SLHHVPD 731
Query: 288 VACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFS 325
++C G H+ + K S + L +G +S S
Sbjct: 732 LSCRGWHTILIVEKVLNSKTIRSNSSGLSIGTVVQSSS 769
>UNIPROTKB|E2QYP0 [details] [associations]
symbol:NEK9 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0019901 "protein kinase binding"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0004674 "protein serine/threonine
kinase activity" evidence=IEA] InterPro:IPR000719
InterPro:IPR002290 InterPro:IPR008271 InterPro:IPR011009
Pfam:PF00069 PROSITE:PS00108 PROSITE:PS50011 SMART:SM00220
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005739 GO:GO:0005524
SUPFAM:SSF56112 GO:GO:0004674 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PROSITE:PS50012 KO:K08857
GeneTree:ENSGT00700000104074 CTD:91754 OMA:GCDGTFL
EMBL:AAEX03005855 RefSeq:XP_547912.3 Ensembl:ENSCAFT00000026967
GeneID:490790 KEGG:cfa:490790 NextBio:20863745 Uniprot:E2QYP0
Length = 976
Score = 246 (91.7 bits), Expect = 1.7e-17, P = 1.7e-17
Identities = 110/433 (25%), Positives = 180/433 (41%)
Query: 10 TARPVDNIPAK-SAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIA 68
T P+ + ++ S +YVWG G K ++L + K GC A +
Sbjct: 335 TEAPIAVVTSRTSEVYVWG-------GGKSTPQKLDVIKS------GCSAR------QVC 375
Query: 69 CGHEHTAAVASDGTLFTW-----GANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGA 123
G+ H A V + L+TW G GQLG G + + P+ V++LQ + ++ +SCG
Sbjct: 376 AGNTHFAVVTVEKELYTWVNMQGGTKLHGQLGHGDKASYRQPKHVEKLQGKAIRQVSCGD 435
Query: 124 HCTAAIAEPRENDGTISTSRLWVWGQNQ--GSNFPRLFWGAFTPNTIICQVSCGSVHVVA 181
T + + + + G ++ G F N + QVSCG HVV
Sbjct: 436 DFTVCVTDEGQLYA-FGSDYYGCMGVDKVAGPEVLEPMQLNFFLNNPVEQVSCGDNHVVV 494
Query: 182 LSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSA 241
L+ + +WG EYG+LG E P+ + + P+ I V CG +
Sbjct: 495 LTRNKEVYSWGCGEYGRLGLDSE-EDYYTPQKV--------DVPKALIIVAVQCGCDGTF 545
Query: 242 AVSENGEVYTWGLGSVGQLGHCSLQSG--DKEL---LPRRV---VALDGIF--IKDVACG 291
++++G+V GL +LG SG + E +P +A F I+ +A G
Sbjct: 546 LLTQSGKVLACGLNEFNKLGLNQCMSGIINHEAYHEIPYTTSFTLAKQLSFYKIRTIAPG 605
Query: 292 GVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVP-NGVQL- 349
H+ A+ +G L +G ++ GQLG+G + I +L P G Q+
Sbjct: 606 KTHTAAIDERGRLLTFGCNKCGQLGVGNYKKRLG------------INLLGGPLGGKQVI 653
Query: 350 -VACGHSHTLVYMRDGRIHGWGYNSYGQAA---NEKS-----TYAWYPSPVDWCVGEVRK 400
V+CG T+ D I WG G+ A E+ +W P P+ + V
Sbjct: 654 RVSCGDEFTIAATDDNHIFAWGNGGNGRLAMTPTERPHGSDICTSW-PRPIFGSLHHVPD 712
Query: 401 LAAGGGHSAVLAD 413
L+ G H+ ++ +
Sbjct: 713 LSCRGWHTILIVE 725
Score = 156 (60.0 bits), Expect = 1.3e-07, P = 1.3e-07
Identities = 61/254 (24%), Positives = 112/254 (44%)
Query: 67 IACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCT 126
++CG H + + +++WG E+G+LG +EE P+KV ++ + ++ CG T
Sbjct: 485 VSCGDNHVVVLTRNKEVYSWGCGEYGRLGLDSEEDYYTPQKVDVPKALIIVAVQCGCDGT 544
Query: 127 AAIAEPRE--NDGTISTSRLWVWGQNQ---GS-NFPRLFWGAFTPN-TIICQVSC----- 174
+ + + G ++L G NQ G N +T + T+ Q+S
Sbjct: 545 FLLTQSGKVLACGLNEFNKL---GLNQCMSGIINHEAYHEIPYTTSFTLAKQLSFYKIRT 601
Query: 175 ---GSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKIT 231
G H A+ E G L +G N+ GQLG G + L G ++ G +++
Sbjct: 602 IAPGKTHTAAIDERGRLLTFGCNKCGQLGVGNYKKRL-GINLLGGPLGG-------KQVI 653
Query: 232 QVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELL----PRRVVALDGIFIKD 287
+VSCG+ + A +++ ++ WG G G+L + + PR + + D
Sbjct: 654 RVSCGDEFTIAATDDNHIFAWGNGGNGRLAMTPTERPHGSDICTSWPRPIFG-SLHHVPD 712
Query: 288 VACGGVHSCALTSK 301
++C G H+ + K
Sbjct: 713 LSCRGWHTILIVEK 726
>SGD|S000003065 [details] [associations]
symbol:SRM1 "Nucleotide exchange factor for Gsp1p"
species:4932 "Saccharomyces cerevisiae" [GO:0005634 "nucleus"
evidence=IEA;IDA] [GO:0007067 "mitosis" evidence=IEA] [GO:0019236
"response to pheromone" evidence=IEA] [GO:0051301 "cell division"
evidence=IEA] [GO:0000790 "nuclear chromatin" evidence=IDA]
[GO:0004871 "signal transducer activity" evidence=IMP] [GO:0006810
"transport" evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=ISM] [GO:0000054
"ribosomal subunit export from nucleus" evidence=IMP] [GO:0006407
"rRNA export from nucleus" evidence=IMP] [GO:0005085
"guanyl-nucleotide exchange factor activity" evidence=IEA]
SGD:S000003065 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0016021
GO:GO:0051301 GO:GO:0007067 EMBL:BK006941 GO:GO:0000790
GO:GO:0004871 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
GO:GO:0005085 PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626
PROSITE:PS50012 eggNOG:COG5184 GO:GO:0019236 GO:GO:0000054
GeneTree:ENSGT00700000104160 GO:GO:0006407 OMA:PFEAIWA
HOGENOM:HOG000170207 OrthoDB:EOG466ZVF EMBL:M27013 EMBL:Z72619
PIR:A32320 RefSeq:NP_011418.1 PDB:3OF7 PDBsum:3OF7
ProteinModelPortal:P21827 SMR:P21827 DIP:DIP-2315N IntAct:P21827
MINT:MINT-561451 STRING:P21827 PaxDb:P21827 PeptideAtlas:P21827
EnsemblFungi:YGL097W GeneID:852782 KEGG:sce:YGL097W CYGD:YGL097w
EvolutionaryTrace:P21827 NextBio:972265 Genevestigator:P21827
GermOnline:YGL097W Uniprot:P21827
Length = 482
Score = 204 (76.9 bits), Expect = 2.0e-17, Sum P(2) = 2.0e-17
Identities = 57/208 (27%), Positives = 101/208 (48%)
Query: 169 ICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAP-EL 227
I Q++ G H++ L E G++ AWG + QLGR + ++ R+ K LD P L
Sbjct: 223 IVQLAPGKDHILFLDEEGMVFAWGNGQQNQLGRKV----MERFRL-----KTLDPRPFGL 273
Query: 228 EKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCS-LQSGDKELLPRRVVALDGIFIK 286
+ ++ GE H A++++ ++ +WGL GQ G ++ G P+R+ D + I+
Sbjct: 274 RHVKYIASGENHCFALTKDNKLVSWGLNQFGQCGVSEDVEDGALVTKPKRLALPDNVVIR 333
Query: 287 DVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNG 346
+A G HS L+ G LY+ G ++G+ P+ + R +P+ N
Sbjct: 334 SIAAGEHHSLILSQDGDLYSCGRLDMFEVGI-PKDNLPEYTYKDVHGKARAVPLPTKLNN 392
Query: 347 V---QLVACGHSHTLVYMRDGRIHGWGY 371
V + VA G H++ ++G + WG+
Sbjct: 393 VPKFKSVAAGSHHSVAVAQNGIAYSWGF 420
Score = 178 (67.7 bits), Expect = 4.1e-10, Sum P(2) = 4.1e-10
Identities = 82/331 (24%), Positives = 137/331 (41%)
Query: 46 PKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGTLFTWGA---NEFGQLGDGTEEGR 102
P ++P E F P + + +A + A+ S+G ++ WG NE G LG ++ +
Sbjct: 150 PAKIPRESFP-PLAEGHKVVQLAATDNMSCALFSNGEVYAWGTFRCNE-GILGFYQDKIK 207
Query: 103 --KHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTSRLWVWGQNQGSNFPRLFW 160
K P KV + ++ G + E +G + + WG Q + R
Sbjct: 208 IQKTPWKVPTFSKYNIVQLAPGKDHILFLDE----EGMV-----FAWGNGQQNQLGRKVM 258
Query: 161 GAFTPNTI---------ICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGP 211
F T+ + ++ G H AL++ L +WG N++GQ G E G
Sbjct: 259 ERFRLKTLDPRPFGLRHVKYIASGENHCFALTKDNKLVSWGLNQFGQCGVSEDVE--DGA 316
Query: 212 RVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWG---LGSVG----QLGHCS 264
V K K L P+ I ++ GE+HS +S++G++Y+ G + VG L +
Sbjct: 317 LVTK--PKRL-ALPDNVVIRSIAAGEHHSLILSQDGDLYSCGRLDMFEVGIPKDNLPEYT 373
Query: 265 LQS--GDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTR 322
+ G +P + K VA G HS A+ G Y+WG + +GLGP
Sbjct: 374 YKDVHGKARAVPLPTKLNNVPKFKSVAAGSHHSVAVAQNGIAYSWGFGETYAVGLGPFED 433
Query: 323 SFSLIPNESDTYFRNIPILVVPNGVQLVACG 353
+ +T ++ I++V G Q G
Sbjct: 434 DTEVPTRIKNTATQDHNIILVGCGGQFSVSG 464
Score = 166 (63.5 bits), Expect = 3.6e-09, P = 3.6e-09
Identities = 79/295 (26%), Positives = 120/295 (40%)
Query: 149 QNQGSNFPRLFWGAFTPN--TIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITC- 205
+N+ PRL F P I + G +H +AL E + +WG N+ G LGR +
Sbjct: 66 KNKEVKRPRL--NPFLPRDEAKIISFAVGGMHTLALDEESNVWSWGCNDVGALGRDTSNA 123
Query: 206 -EGLQGPRVIK------GYAKFLDEAP------------ELEKITQVSCGEYHSAAVSEN 246
E L+ G L+ P E K+ Q++ + S A+ N
Sbjct: 124 KEQLKDMDADDSSDDEDGDLNELESTPAKIPRESFPPLAEGHKVVQLAATDNMSCALFSN 183
Query: 247 GEVYTWGLG--SVGQLGHCSLQSGDK-ELLPRRVVALDGIFIKDVACGGVHSCALTSKGA 303
GEVY WG + G LG Q K + P +V I +A G H L +G
Sbjct: 184 GEVYAWGTFRCNEGILGF--YQDKIKIQKTPWKVPTFSKYNIVQLAPGKDHILFLDEEGM 241
Query: 304 LYAWGGSQAGQLGLGPQTRSFSLIPNESDTY-FRNIPILVVPNGVQLVACGHSHTLVYMR 362
++AWG Q QLG R F L + + R+ V+ +A G +H +
Sbjct: 242 VFAWGNGQQNQLGRKVMER-FRLKTLDPRPFGLRH---------VKYIASGENHCFALTK 291
Query: 363 DGRIHGWGYNSYGQA--ANEKSTYAWYPSPVDWCVGE---VRKLAAGGGHSAVLA 412
D ++ WG N +GQ + + A P + + +R +AAG HS +L+
Sbjct: 292 DNKLVSWGLNQFGQCGVSEDVEDGALVTKPKRLALPDNVVIRSIAAGEHHSLILS 346
Score = 145 (56.1 bits), Expect = 9.6e-11, Sum P(2) = 9.6e-11
Identities = 43/150 (28%), Positives = 68/150 (45%)
Query: 223 EAPELEK--ITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVAL 280
+ P K I Q++ G+ H + E G V+ WG G QLG ++ + L R L
Sbjct: 214 KVPTFSKYNIVQLAPGKDHILFLDEEGMVFAWGNGQQNQLGRKVMERFRLKTLDPRPFGL 273
Query: 281 DGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPI 340
+K +A G H ALT L +WG +Q GQ G+ +L+ +P
Sbjct: 274 R--HVKYIASGENHCFALTKDNKLVSWGLNQFGQCGVSEDVEDGALVTKPKRLA---LPD 328
Query: 341 LVVPNGVQLVACGHSHTLVYMRDGRIHGWG 370
VV ++ +A G H+L+ +DG ++ G
Sbjct: 329 NVV---IRSIAAGEHHSLILSQDGDLYSCG 355
Score = 144 (55.7 bits), Expect = 2.6e-06, Sum P(2) = 2.6e-06
Identities = 72/284 (25%), Positives = 117/284 (41%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+Y WG + G G + +I Q P + P + + +A G +H + +G
Sbjct: 186 VYAWGTFRCNE-GILGFYQD-KIKIQKTP--WKVPTFSKYNIVQLAPGKDHILFLDEEGM 241
Query: 83 LFTWGANEFGQLGDGT-EEGRKHPEKVKQLQSEFVKSISCGA-HCTAAIAEPR-ENDGTI 139
+F WG + QLG E R + VK I+ G HC A + + + G
Sbjct: 242 VFAWGNGQQNQLGRKVMERFRLKTLDPRPFGLRHVKYIASGENHCFALTKDNKLVSWGLN 301
Query: 140 STSRLWVWGQ-NQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQ 198
+ V G+ + A N +I ++ G H + LS+ G L + G + +
Sbjct: 302 QFGQCGVSEDVEDGALVTKPKRLALPDNVVIRSIAAGEHHSLILSQDGDLYSCGRLDMFE 361
Query: 199 LGRGITCEGLQGP--RVIKGYAKFLDEAPELE---KITQVSCGEYHSAAVSENGEVYTWG 253
+G I + L + + G A+ + +L K V+ G +HS AV++NG Y+WG
Sbjct: 362 VG--IPKDNLPEYTYKDVHGKARAVPLPTKLNNVPKFKSVAAGSHHSVAVAQNGIAYSWG 419
Query: 254 LGSVGQLGHCSLQSGDKELLPRRV--VALDGIFIKDVACGGVHS 295
G +G + D E+ P R+ A I V CGG S
Sbjct: 420 FGETYAVGLGPFED-DTEV-PTRIKNTATQDHNIILVGCGGQFS 461
Score = 81 (33.6 bits), Expect = 2.0e-17, Sum P(2) = 2.0e-17
Identities = 23/94 (24%), Positives = 46/94 (48%)
Query: 23 IYVWGYNHSGQTGRK--GRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASD 80
I+ WG + G + ++++ P+ L P L P ++ + A G HT A+ +
Sbjct: 48 IFCWGTGSMCELGLGPLAKNKEVKRPR-LNPFL---PRD-EAKIISFAVGGMHTLALDEE 102
Query: 81 GTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSE 114
+++WG N+ G LG T + E++K + ++
Sbjct: 103 SNVWSWGCNDVGALGRDTSNAK---EQLKDMDAD 133
Score = 42 (19.8 bits), Expect = 2.2e-13, Sum P(2) = 2.2e-13
Identities = 19/71 (26%), Positives = 25/71 (35%)
Query: 83 LFTWGANEFGQLGDGT---EEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTI 139
+F WG +LG G + K P L + K IS +A E
Sbjct: 48 IFCWGTGSMCELGLGPLAKNKEVKRPRLNPFLPRDEAKIISFAVGGMHTLALDEE----- 102
Query: 140 STSRLWVWGQN 150
S +W WG N
Sbjct: 103 --SNVWSWGCN 111
Score = 39 (18.8 bits), Expect = 4.5e-13, Sum P(2) = 4.5e-13
Identities = 7/17 (41%), Positives = 10/17 (58%)
Query: 20 KSAIYVWGYNHSGQTGR 36
+S ++ WG N G GR
Sbjct: 102 ESNVWSWGCNDVGALGR 118
>UNIPROTKB|F1S9B1 [details] [associations]
symbol:SERGEF "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0050709 "negative regulation of protein secretion"
evidence=IEA] [GO:0045111 "intermediate filament cytoskeleton"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] InterPro:IPR027048 INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005730 GO:GO:0045111 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS50012
GO:GO:0050709 GeneTree:ENSGT00700000104160 PANTHER:PTHR22870:SF7
EMBL:CU914672 EMBL:CU467662 EMBL:CU693468
Ensembl:ENSSSCT00000014607 OMA:VYQWGTG Uniprot:F1S9B1
Length = 338
Score = 232 (86.7 bits), Expect = 2.1e-17, P = 2.1e-17
Identities = 89/320 (27%), Positives = 142/320 (44%)
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQL-QSEFVKSISCGAHCTAAIAEPRENDGTIST 141
LF WGAN +GQLG G +E P+++ + + VK I+ G +A + + G++
Sbjct: 17 LFAWGANSYGQLGLGHKEDVLLPQQLSEFCKPGCVKRITGGGGHSAIVTD----QGSLFV 72
Query: 142 SRLWVWGQNQGSNFPRLFWGAFTPNTIIC---QVSCGSVHVVALSECGLLQAWGYNEYGQ 198
L GQ + + + + + C QV+CG + L++ G + + G N +GQ
Sbjct: 73 CGLNKDGQLGLGHTEDVLYFTLCKSLLGCPIQQVACGWDFTIILTKNGQVLSCGSNSFGQ 132
Query: 199 LGRGITCEGLQGPRVIKGYAKFLDEAPEL--EKITQVSCGEYHSAAVSENGEVYTWGLGS 256
LG GPR + +A E+ EK+ ++ G H+ A + +G V+ WG G
Sbjct: 133 LGVP------HGPRRC-----VVPQAIEVQREKVVSIAAGLRHALAATASGLVFQWGTG- 180
Query: 257 VGQLGH--CSLQSGDKELL---PRRV-VALDGIFIKDVACGGVHSCALTSKGALYAWGGS 310
+ G C Q+ L P +V V L+ V G HS +LT G LY WG +
Sbjct: 181 LASSGRRLCPGQTLPLFLTAKEPSKVTVGLENSQAVCVLAGSGHSASLTDAGELYVWGSN 240
Query: 311 QAGQLGLGPQTRSFSLIPNESDTY-FRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGW 369
+ GQL +F +P + + + F+N V V G +H + G++ W
Sbjct: 241 KHGQLA---SQAAFLPLPQKIEAHRFQN-------EKVAAVWSGWTHLVAQTETGKVFTW 290
Query: 370 GYNSYGQAANE-KSTYAWYP 388
G YGQ +S W P
Sbjct: 291 GRADYGQLGRTLESPEGWKP 310
Score = 229 (85.7 bits), Expect = 5.4e-17, P = 5.4e-17
Identities = 88/309 (28%), Positives = 134/309 (43%)
Query: 18 PAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAV 77
P +A++ WG N GQ G G + + +P+QL F C G R I G H+A V
Sbjct: 12 PPATALFAWGANSYGQLGL-GHKEDVLLPQQLSE--F-CKPGCVKR---ITGGGGHSAIV 64
Query: 78 ASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDG 137
G+LF G N+ GQLG G E + K L ++ ++CG T + + +G
Sbjct: 65 TDQGSLFVCGLNKDGQLGLGHTEDVLYFTLCKSLLGCPIQQVACGWDFTIILTK----NG 120
Query: 138 TISTSRLWVWGQNQGSNFPRLFWGAFTPNTI------ICQVSCGSVHVVALSECGLLQAW 191
+ + +GQ + PR P I + ++ G H +A + GL+ W
Sbjct: 121 QVLSCGSNSFGQLGVPHGPRR---CVVPQAIEVQREKVVSIAAGLRHALAATASGLVFQW 177
Query: 192 GYNEYGQLGRGITCEGLQGPRVI--KGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEV 249
G GR + C G P + K +K + E + V G HSA++++ GE+
Sbjct: 178 GTG-LASSGRRL-CPGQTLPLFLTAKEPSK-VTVGLENSQAVCVLAGSGHSASLTDAGEL 234
Query: 250 YTWGLGSVGQLGHCSLQSGDKELLPRRVVA--LDGIFIKDVACGGVHSCALTSKGALYAW 307
Y WG GQL Q+ L P+++ A + V G H A T G ++ W
Sbjct: 235 YVWGSNKHGQLAS---QAAFLPL-PQKIEAHRFQNEKVAAVWSGWTHLVAQTETGKVFTW 290
Query: 308 GGSQAGQLG 316
G + GQLG
Sbjct: 291 GRADYGQLG 299
Score = 213 (80.0 bits), Expect = 5.5e-15, P = 5.5e-15
Identities = 83/263 (31%), Positives = 120/263 (45%)
Query: 20 KSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVAS 79
+ +++V G N GQ G E L L L GCP +ACG + T +
Sbjct: 67 QGSLFVCGLNKDGQLGLGHTEDVLYFT--LCKSLLGCPIQ------QVACGWDFTIILTK 118
Query: 80 DGTLFTWGANEFGQLGDGTEEGRKH---PEKVKQLQSEFVKSISCGA-HCTAAIAEP--- 132
+G + + G+N FGQLG G + P+ + ++Q E V SI+ G H AA A
Sbjct: 119 NGQVLSCGSNSFGQLG--VPHGPRRCVVPQAI-EVQREKVVSIAAGLRHALAATASGLVF 175
Query: 133 RENDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIIC-----QVSC---GSVHVVALSE 184
+ G S+ R GQ P LF A P+ + Q C GS H +L++
Sbjct: 176 QWGTGLASSGRRLCPGQT----LP-LFLTAKEPSKVTVGLENSQAVCVLAGSGHSASLTD 230
Query: 185 CGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVS 244
G L WG N++GQL L P+ I+ + +F +E K+ V G H A +
Sbjct: 231 AGELYVWGSNKHGQLASQAAFLPL--PQKIEAH-RFQNE-----KVAAVWSGWTHLVAQT 282
Query: 245 ENGEVYTWGLGSVGQLGHCSLQS 267
E G+V+TWG GQLG +L+S
Sbjct: 283 ETGKVFTWGRADYGQLGR-TLES 304
Score = 165 (63.1 bits), Expect = 2.1e-09, P = 2.1e-09
Identities = 74/239 (30%), Positives = 99/239 (41%)
Query: 188 LQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENG 247
L AWG N YGQLG G E + P+ + + K P K +++ G HSA V++ G
Sbjct: 17 LFAWGANSYGQLGLGHK-EDVLLPQQLSEFCK-----PGCVK--RITGGGGHSAIVTDQG 68
Query: 248 EVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAW 307
++ GL GQLG L + L +L G I+ VACG + LT G + +
Sbjct: 69 SLFVCGLNKDGQLG---LGHTEDVLYFTLCKSLLGCPIQQVACGWDFTIILTKNGQVLSC 125
Query: 308 GGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIH 367
G + GQLG+ P ++P I V V +A G H L G +
Sbjct: 126 GSNSFGQLGV-PHGPRRCVVPQA---------IEVQREKVVSIAAGLRHALAATASGLVF 175
Query: 368 GWGYN--SYGQAANEKSTYAWY---PSPVDWCVGEVRKLA----AGGGHSAVLADACSL 417
WG S G+ T + P VG A AG GHSA L DA L
Sbjct: 176 QWGTGLASSGRRLCPGQTLPLFLTAKEPSKVTVGLENSQAVCVLAGSGHSASLTDAGEL 234
Score = 163 (62.4 bits), Expect = 3.5e-09, P = 3.5e-09
Identities = 70/274 (25%), Positives = 115/274 (41%)
Query: 131 EPRENDGTISTSRLWVWGQNQGSNFPRLFWG----AFTPNTI--ICQVSC------GSVH 178
EP ++ + L+ WG N ++ +L G P + C+ C G H
Sbjct: 4 EPSASEAAPPATALFAWGAN---SYGQLGLGHKEDVLLPQQLSEFCKPGCVKRITGGGGH 60
Query: 179 VVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEY 238
+++ G L G N+ GQLG G T + L K L P I QV+CG
Sbjct: 61 SAIVTDQGSLFVCGLNKDGQLGLGHTEDVLYFT-----LCKSLLGCP----IQQVACGWD 111
Query: 239 HSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCAL 298
+ +++NG+V + G S GQLG + G + + + + + + +A G H+ A
Sbjct: 112 FTIILTKNGQVLSCGSNSFGQLG---VPHGPRRCVVPQAIEVQREKVVSIAAGLRHALAA 168
Query: 299 TSKGALYAWG-GSQAGQLGLGP-QTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSH 356
T+ G ++ WG G + L P QT L E + + + + V G H
Sbjct: 169 TASGLVFQWGTGLASSGRRLCPGQTLPLFLTAKEPS----KVTVGLENSQAVCVLAGSGH 224
Query: 357 TLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSP 390
+ G ++ WG N +GQ A++ A+ P P
Sbjct: 225 SASLTDAGELYVWGSNKHGQLASQA---AFLPLP 255
>MGI|MGI:1919784 [details] [associations]
symbol:Rcc2 "regulator of chromosome condensation 2"
species:10090 "Mus musculus" [GO:0000775 "chromosome, centromeric
region" evidence=IEA] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005575 "cellular_component" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005694 "chromosome" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005856 "cytoskeleton" evidence=IEA]
[GO:0005874 "microtubule" evidence=IEA] [GO:0007049 "cell cycle"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0051301 "cell division"
evidence=IEA] MGI:MGI:1919784 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005737 GO:GO:0000775 GO:GO:0005730 GO:GO:0051301
GO:GO:0007067 GO:GO:0005819 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0005874 PRINTS:PR00633 PROSITE:PS00625
PROSITE:PS00626 PROSITE:PS50012 EMBL:AL954710 eggNOG:COG5184
GeneTree:ENSGT00700000104160 CTD:55920 HOGENOM:HOG000232061
HOVERGEN:HBG080538 OMA:FGENKLG OrthoDB:EOG4DNF4B EMBL:AK076040
EMBL:BC086666 EMBL:AK129370 IPI:IPI00222509 RefSeq:NP_776292.1
UniGene:Mm.253 ProteinModelPortal:Q8BK67 SMR:Q8BK67 STRING:Q8BK67
PhosphoSite:Q8BK67 PaxDb:Q8BK67 PRIDE:Q8BK67
Ensembl:ENSMUST00000038893 Ensembl:ENSMUST00000071169 GeneID:108911
KEGG:mmu:108911 UCSC:uc008vna.2 InParanoid:A2AWQ3 ChiTaRS:RCC2
NextBio:361459 Bgee:Q8BK67 CleanEx:MM_RCC2 Genevestigator:Q8BK67
GermOnline:ENSMUSG00000040945 Uniprot:Q8BK67
Length = 520
Score = 240 (89.5 bits), Expect = 2.4e-17, P = 2.4e-17
Identities = 104/424 (24%), Positives = 176/424 (41%)
Query: 20 KSAIYVWGYNHSGQTGRKGRERQLRIPKQLP-----PELFGCPAGANSRWLDIACGHEHT 74
K + ++G + GRK +Q + L P +GC +G R + H+
Sbjct: 101 KGQLLIFGATNWDLIGRKEVPKQQAAYRNLGQNLWGPHRYGCLSGVRVRTVVSGSCAAHS 160
Query: 75 AAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRE 134
+ ++G L++WG NE GQLG G + + P ++ L E + +CG + T A+ +
Sbjct: 161 LLITTEGKLWSWGRNEKGQLGHGDTKRVEAPRLIEALSHEAIVLAACGRNHTLALTDTGS 220
Query: 135 --NDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSEC-GLLQAW 191
G +L + Q P P I +++CG+ + L +C G L ++
Sbjct: 221 VFAFGENKMGQLGLGNQTDAVPSPAQIMYNGQP---ITKMACGAEFSM-LMDCKGNLYSF 276
Query: 192 GYNEYGQLGRGITCEGL-QGPR-------VIKGYAKFLDEAPELE-------KITQVSCG 236
G EYGQLG + + + R V + A F+++ + + + V+CG
Sbjct: 277 GCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVRDVACG 336
Query: 237 EYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALD--GIFIKDVACGGVH 294
H+ + V++WG G G+LGH + E++PR V D G + G
Sbjct: 337 ANHTLVLDSQKRVFSWGFGGYGRLGHAEQKD---EMVPRLVKLFDFPGRGATQIYAGYTC 393
Query: 295 SCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGH 354
S A++ G L+ WG + + ES Y + + L ++ +ACG
Sbjct: 394 SFAVSEVGGLFFWGATNTSR---------------ESTMYPKAVQDLCGWR-IRSLACGK 437
Query: 355 SHTLVYMRDGRIHGWGYN------SYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHS 408
S +V + I WG + YG + ST A +D E ++A G HS
Sbjct: 438 SSIIVAADESTI-SWGPSPTFGELGYGDHKPKSSTAAQEVKTLDGIFSE--QVAMGYSHS 494
Query: 409 AVLA 412
V+A
Sbjct: 495 LVIA 498
Score = 226 (84.6 bits), Expect = 9.0e-16, P = 9.0e-16
Identities = 90/313 (28%), Positives = 135/313 (43%)
Query: 139 ISTS-RLWVWGQNQGSNF----------PRLFWGAFTPNTIICQVSCGSVHVVALSECGL 187
I+T +LW WG+N+ PRL A + I+ +CG H +AL++ G
Sbjct: 163 ITTEGKLWSWGRNEKGQLGHGDTKRVEAPRLI-EALSHEAIVL-AACGRNHTLALTDTGS 220
Query: 188 LQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENG 247
+ A+G N+ GQLG G + + P I Y + P IT+++CG S + G
Sbjct: 221 VFAFGENKMGQLGLGNQTDAVPSPAQIM-Y----NGQP----ITKMACGAEFSMLMDCKG 271
Query: 248 EVYTWGLGSVGQLGHCS-------LQ--SGDKELLPRRVVAL-----DG-------IFIK 286
+Y++G GQLGH S Q D EL+PRRV DG + ++
Sbjct: 272 NLYSFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVR 331
Query: 287 DVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPN- 345
DVACG H+ L S+ +++WG G+LG Q ++P R + + P
Sbjct: 332 DVACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKDE--MVP-------RLVKLFDFPGR 382
Query: 346 GVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPV-DWCVGEVRKLAAG 404
G + G++ + G + WG A N YP V D C +R LA G
Sbjct: 383 GATQIYAGYTCSFAVSEVGGLFFWG------ATNTSRESTMYPKAVQDLCGWRIRSLACG 436
Query: 405 GGHSAVLADACSL 417
V AD ++
Sbjct: 437 KSSIIVAADESTI 449
Score = 224 (83.9 bits), Expect = 1.5e-15, P = 1.5e-15
Identities = 97/375 (25%), Positives = 163/375 (43%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
I + ++ WG N GQ G G +++ P+ + A ++ + ACG HT A
Sbjct: 163 ITTEGKLWSWGRNEKGQLGH-GDTKRVEAPRLIE-------ALSHEAIVLAACGRNHTLA 214
Query: 77 VASDGTLFTWGANEFGQLGDGTE-EGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREN 135
+ G++F +G N+ GQLG G + + P ++ + + ++CGA + + + + N
Sbjct: 215 LTDTGSVFAFGENKMGQLGLGNQTDAVPSPAQI-MYNGQPITKMACGAEFSM-LMDCKGN 272
Query: 136 DGTISTSRLWVWGQNQGSNF--------------PR---LFW-----GAF--TPNTIICQ 171
+ G N F PR +F G PN ++
Sbjct: 273 LYSFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVRD 332
Query: 172 VSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKIT 231
V+CG+ H + L + +WG+ YG+LG + + PR++K L + P T
Sbjct: 333 VACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMV-PRLVK-----LFDFPG-RGAT 385
Query: 232 QVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACG 291
Q+ G S AVSE G ++ WG + S + + P+ V L G I+ +ACG
Sbjct: 386 QIYAGYTCSFAVSEVGGLFFWGATNT---------SRESTMYPKAVQDLCGWRIRSLACG 436
Query: 292 GVHSCALTSKGALYAWGGSQA-GQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGV--Q 348
S + + + +WG S G+LG G P +S T + + L +G+ +
Sbjct: 437 K-SSIIVAADESTISWGPSPTFGELGYGDHK------P-KSSTAAQEVKTL---DGIFSE 485
Query: 349 LVACGHSHTLVYMRD 363
VA G+SH+LV RD
Sbjct: 486 QVAMGYSHSLVIARD 500
>ZFIN|ZDB-GENE-070615-14 [details] [associations]
symbol:zgc:163136 "zgc:163136" species:7955 "Danio
rerio" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0006464
"cellular protein modification process" evidence=IEA] Pfam:PF00632
InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119 INTERPRO:IPR000408
Pfam:PF00415 ZFIN:ZDB-GENE-070615-14 GO:GO:0016567 GO:GO:0005622
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 SUPFAM:SSF56204
GeneTree:ENSGT00700000104312 EMBL:BX321880 IPI:IPI00852092
Ensembl:ENSDART00000113072 OMA:CELECKL Bgee:F1Q5I9 Uniprot:F1Q5I9
Length = 997
Score = 244 (91.0 bits), Expect = 3.0e-17, P = 3.0e-17
Identities = 76/231 (32%), Positives = 111/231 (48%)
Query: 108 VKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTSRLWVWGQNQ-GS-NFPRLFWGAFTP 165
+K L++ V I+CG + A+ NDG +L+VWG+N G + G +P
Sbjct: 110 LKGLENRQVIQIACGDQHSMALT----NDG-----QLFVWGENALGQLGLRKEQAGTQSP 160
Query: 166 NTI--IC-----QVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYA 218
+ +C Q+S G H LS G++ WG N GQLG G T + P ++K +
Sbjct: 161 QHLQSLCGIPVAQISAGGNHSFVLSLSGVVFGWGSNSAGQLGLGDTTDRFI-PTIVKSLS 219
Query: 219 KFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVV 278
+K +SCG H+A +S+ G V+T+G G GQLGH SL+ E PR V
Sbjct: 220 G--------KKTVSISCGGEHTATLSKGGTVFTFGSGGFGQLGHNSLKD---EHHPRLVA 268
Query: 279 ALDGIFIKDVACGGVHSCALT-SKGALYAWGGSQAGQLGLGPQTRSFSLIP 328
L G + V CG H+ S +Y++G GQLG G Q + +P
Sbjct: 269 ELWGSKVSQVTCGRHHTLVFEDSSNQIYSFGCGMQGQLGNGEQVKQSVPLP 319
Score = 241 (89.9 bits), Expect = 6.4e-17, P = 6.4e-17
Identities = 60/214 (28%), Positives = 105/214 (49%)
Query: 226 ELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFI 285
E ++ Q++CG+ HS A++ +G+++ WG ++GQLG Q+G + P+ + +L GI +
Sbjct: 114 ENRQVIQIACGDQHSMALTNDGQLFVWGENALGQLGLRKEQAGTQS--PQHLQSLCGIPV 171
Query: 286 KDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPN 345
++ GG HS L+ G ++ WG + AGQLGLG T F IP T +++
Sbjct: 172 AQISAGGNHSFVLSLSGVVFGWGSNSAGQLGLGDTTDRF--IP----TIVKSLS----GK 221
Query: 346 GVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAG 404
++CG HT + G + +G +GQ + +P V G +V ++ G
Sbjct: 222 KTVSISCGGEHTATLSKGGTVFTFGSGGFGQLGHNSLKDEHHPRLVAELWGSKVSQVTCG 281
Query: 405 GGHSAVLADACSLKELCEFRLAESVTLSNASEIE 438
H+ V D S ++ F L N +++
Sbjct: 282 RHHTLVFED--SSNQIYSFGCGMQGQLGNGEQVK 313
Score = 218 (81.8 bits), Expect = 2.2e-14, P = 2.2e-14
Identities = 61/206 (29%), Positives = 102/206 (49%)
Query: 61 NSRWLDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEE-GRKHPEKVKQLQSEFVKSI 119
N + + IACG +H+ A+ +DG LF WG N GQLG E+ G + P+ ++ L V I
Sbjct: 115 NRQVIQIACGDQHSMALTNDGQLFVWGENALGQLGLRKEQAGTQSPQHLQSLCGIPVAQI 174
Query: 120 SCGA-HC-TAAIAEPRENDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSV 177
S G H +++ G+ S +L + G P + T+ +SCG
Sbjct: 175 SAGGNHSFVLSLSGVVFGWGSNSAGQLGL-GDTTDRFIPTIVKSLSGKKTV--SISCGGE 231
Query: 178 HVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGE 237
H LS+ G + +G +GQLG + + PR++ A+ K++QV+CG
Sbjct: 232 HTATLSKGGTVFTFGSGGFGQLGHN-SLKDEHHPRLV---AELWGS-----KVSQVTCGR 282
Query: 238 YHSAAVSENG-EVYTWGLGSVGQLGH 262
+H+ ++ ++Y++G G GQLG+
Sbjct: 283 HHTLVFEDSSNQIYSFGCGMQGQLGN 308
Score = 188 (71.2 bits), Expect = 4.4e-11, P = 4.4e-11
Identities = 59/189 (31%), Positives = 87/189 (46%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++VWG N GQ G + + + P+ L L G P I+ G H+ ++ G
Sbjct: 137 LFVWGENALGQLGLRKEQAGTQSPQHLQ-SLCGIPVA------QISAGGNHSFVLSLSGV 189
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
+F WG+N GQLG G R P VK L + SISCG TA +++ GT+ T
Sbjct: 190 VFGWGSNSAGQLGLGDTTDRFIPTIVKSLSGKKTVSISCGGEHTATLSK----GGTVFTF 245
Query: 143 RLWVWGQ---N--QGSNFPRL---FWGAFTPNTIICQVSCGSVHVVALSECG-LLQAWGY 193
+GQ N + + PRL WG+ + QV+CG H + + + ++G
Sbjct: 246 GSGGFGQLGHNSLKDEHHPRLVAELWGSK-----VSQVTCGRHHTLVFEDSSNQIYSFGC 300
Query: 194 NEYGQLGRG 202
GQLG G
Sbjct: 301 GMQGQLGNG 309
Score = 185 (70.2 bits), Expect = 2.0e-16, Sum P(2) = 2.0e-16
Identities = 58/187 (31%), Positives = 82/187 (43%)
Query: 230 ITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVA 289
+ Q+S G HS +S +G V+ WG S GQLG L +P V +L G ++
Sbjct: 171 VAQISAGGNHSFVLSLSGVVFGWGSNSAGQLG---LGDTTDRFIPTIVKSLSGKKTVSIS 227
Query: 290 CGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQL 349
CGG H+ L+ G ++ +G GQLG SL D + + + + V
Sbjct: 228 CGGEHTATLSKGGTVFTFGSGGFGQLGHN------SL----KDEHHPRLVAELWGSKVSQ 277
Query: 350 VACGHSHTLVYM-RDGRIHGWGYNSYGQAANEKSTYAWYPSPV---DWCVG-EVRKLAAG 404
V CG HTLV+ +I+ +G GQ N + P PV C + KL AG
Sbjct: 278 VTCGRHHTLVFEDSSNQIYSFGCGMQGQLGNGEQVKQSVPLPVLLPTECTEFTMEKLIAG 337
Query: 405 GGHSAVL 411
HS L
Sbjct: 338 ENHSFAL 344
Score = 166 (63.5 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 53/186 (28%), Positives = 88/186 (47%)
Query: 228 EKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKD 287
E+I + CGE + ++++G+V +V C G L R+V+
Sbjct: 77 ERIRSIVCGEAGAVLLADDGKVLVMDQSTV-----CRPLKG---LENRQVI--------Q 120
Query: 288 VACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGV 347
+ACG HS ALT+ G L+ WG + GQLGL + +S + +++ +P V
Sbjct: 121 IACGDQHSMALTNDGQLFVWGENALGQLGLRKEQAG-----TQSPQHLQSL--CGIP--V 171
Query: 348 QLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVR-KLAAGGG 406
++ G +H+ V G + GWG NS GQ +T + P+ V G+ ++ GG
Sbjct: 172 AQISAGGNHSFVLSLSGVVFGWGSNSAGQLGLGDTTDRFIPTIVKSLSGKKTVSISCGGE 231
Query: 407 HSAVLA 412
H+A L+
Sbjct: 232 HTATLS 237
Score = 102 (41.0 bits), Expect = 2.0e-16, Sum P(2) = 2.0e-16
Identities = 37/109 (33%), Positives = 52/109 (47%)
Query: 106 EKVK--QLQSEFVKSISCGAHCTAAIAEPRENDGTISTSRLWVWGQNQGSNFPRLFWGAF 163
EK++ QLQ+E ++SI CG +A+ DG ++ V Q S R G
Sbjct: 67 EKLEPLQLQNERIRSIVCGEAGAVLLAD----DG-----KVLVMDQ---STVCRPLKGL- 113
Query: 164 TPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPR 212
N + Q++CG H +AL+ G L WG N GQLG G Q P+
Sbjct: 114 -ENRQVIQIACGDQHSMALTNDGQLFVWGENALGQLGLRKEQAGTQSPQ 161
>TAIR|locus:2079147 [details] [associations]
symbol:AT3G47660 "AT3G47660" species:3702 "Arabidopsis
thaliana" [GO:0003682 "chromatin binding" evidence=ISS] [GO:0008536
"Ran GTPase binding" evidence=ISS] [GO:0046872 "metal ion binding"
evidence=IEA] InterPro:IPR000306 Pfam:PF01363 SMART:SM00064
INTERPRO:IPR000408 Pfam:PF00415 EMBL:CP002686 Gene3D:2.30.29.30
InterPro:IPR011993 GO:GO:0046872 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 Gene3D:3.30.40.10
InterPro:IPR017455 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 PROSITE:PS50178 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 IPI:IPI00548806 RefSeq:NP_190350.4 UniGene:At.48747
UniGene:At.66547 ProteinModelPortal:F4JCN3 SMR:F4JCN3 PRIDE:F4JCN3
EnsemblPlants:AT3G47660.1 GeneID:823920 KEGG:ath:AT3G47660
OMA:CLSHEIS ArrayExpress:F4JCN3 Uniprot:F4JCN3
Length = 954
Score = 243 (90.6 bits), Expect = 3.6e-17, P = 3.6e-17
Identities = 89/293 (30%), Positives = 125/293 (42%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
+ A +Y WG + G G K P + G G + I+CG HTA
Sbjct: 366 VTASGDLYAWG-DGDHNAGLLGLGSGASHWK--PVRILGQMEGIYVK--AISCGPWHTAF 420
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND 136
V S+G LFT+G FG LG G P +V+ L +CG +AA+ +
Sbjct: 421 VTSEGKLFTFGDGTFGALGHGDRISTNIPREVEALNGCRTIKAACGVWHSAAVVSVF-GE 479
Query: 137 GTISTSRLWVWGQNQGSNFP------RLFWGAFTP--NTIICQVSCGSVHVVALSECGLL 188
T S+ +L+ WG RL T T QV+CG VALS G +
Sbjct: 480 AT-SSGKLFTWGDGDDGRLGHGDIECRLIPSCVTELDTTSFQQVACGQSITVALSMSGQV 538
Query: 189 QAWGYNEYGQ-LGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENG 247
A G + + R +C ++G G K + +V+CG +H A ++
Sbjct: 539 YAMGTADPSHDIVRAPSC--IEG-----GLGKSF--------VQEVACGFHHIAVLNSKA 583
Query: 248 EVYTWGLGSVGQLGHCSLQSGDKEL--LPRRVVALDGIFIKDVACGGVHSCAL 298
EVYTWG GS GQLGH GD E +P V AL G ++ V CG ++ +
Sbjct: 584 EVYTWGKGSNGQLGH-----GDTEYRCMPTLVKALKGKQVRKVVCGSNYTATI 631
Score = 228 (85.3 bits), Expect = 1.6e-15, P = 1.6e-15
Identities = 83/303 (27%), Positives = 125/303 (41%)
Query: 23 IYVWGYN-HSGQTG----RKGRERQLRIPKQLPPELFGCPA-GANSRWLDIACGHEHTAA 76
++VWG + G G + G L LP L A A S I+CG +
Sbjct: 258 VFVWGESIGDGLLGGGMHKSGSSSSLMTDSFLPKVLKSHVALDAQS----ISCGTNYAVL 313
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRE-- 134
V G +++WG G+LG G HP+ + + V+ CG T A+ +
Sbjct: 314 VTKQGQMYSWGEESGGRLGHGVCSYVPHPKLIDEFNGSTVELADCGEFHTCAVTASGDLY 373
Query: 135 --NDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWG 192
DG + L + G P G + +SCG H ++ G L +G
Sbjct: 374 AWGDGDHNAGLLGL-GSGASHWKPVRILGQME-GIYVKAISCGPWHTAFVTSEGKLFTFG 431
Query: 193 YNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAV-------SE 245
+G LG G PR + EA + + +CG +HSAAV +
Sbjct: 432 DGTFGALGHGDRIS-TNIPREV--------EALNGCRTIKAACGVWHSAAVVSVFGEATS 482
Query: 246 NGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALY 305
+G+++TWG G G+LGH ++ L+P V LD + VACG + AL+ G +Y
Sbjct: 483 SGKLFTWGDGDDGRLGHGDIEC---RLIPSCVTELDTTSFQQVACGQSITVALSMSGQVY 539
Query: 306 AWG 308
A G
Sbjct: 540 AMG 542
Score = 220 (82.5 bits), Expect = 1.3e-14, P = 1.3e-14
Identities = 103/354 (29%), Positives = 144/354 (40%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
+ + +Y WG SG GR G +P P+L G+ D CG HT A
Sbjct: 314 VTKQGQMYSWG-EESG--GRLGHGVCSYVPH---PKLIDEFNGSTVELAD--CGEFHTCA 365
Query: 77 VASDGTLFTWGANEF--GQLGDGTEEGRKHPEKVK-QLQSEFVKSISCGAHCTAAIAEPR 133
V + G L+ WG + G LG G+ P ++ Q++ +VK+ISCG TA +
Sbjct: 366 VTASGDLYAWGDGDHNAGLLGLGSGASHWKPVRILGQMEGIYVKAISCGPWHTAFVTSEG 425
Query: 134 E----NDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVAL-SECGLL 188
+ DGT G +N PR TI + +CG H A+ S G
Sbjct: 426 KLFTFGDGTFGALG---HGDRISTNIPREVEALNGCRTI--KAACGVWHSAAVVSVFGEA 480
Query: 189 QAWG-YNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENG 247
+ G +G G G R+I LD QV+CG+ + A+S +G
Sbjct: 481 TSSGKLFTWGDGDDGRLGHGDIECRLIPSCVTELDTT----SFQQVACGQSITVALSMSG 536
Query: 248 EVYTWGLGSVGQLGHCSLQSGDKELLPRRVVA-LDGIFIKDVACGGVHSCALTSKGALYA 306
+VY G S D P + L F+++VACG H L SK +Y
Sbjct: 537 QVYAMGTAD---------PSHDIVRAPSCIEGGLGKSFVQEVACGFHHIAVLNSKAEVYT 587
Query: 307 WGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVP-NGVQL--VACGHSHT 357
WG GQLG G DT +R +P LV G Q+ V CG ++T
Sbjct: 588 WGKGSNGQLGHG-------------DTEYRCMPTLVKALKGKQVRKVVCGSNYT 628
Score = 158 (60.7 bits), Expect = 7.7e-08, P = 7.7e-08
Identities = 81/280 (28%), Positives = 117/280 (41%)
Query: 144 LWVWGQ-NQGSNFPRLFWGA--FTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQL- 199
L+ WG + + L GA + P I+ Q+ ++V A+S CG G+L
Sbjct: 372 LYAWGDGDHNAGLLGLGSGASHWKPVRILGQME--GIYVKAIS-CGPWHTAFVTSEGKLF 428
Query: 200 --GRGITCEGL-QGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAV-SENGEVYTWG-L 254
G G T L G R+ + ++ I + +CG +HSAAV S GE + G L
Sbjct: 429 TFGDG-TFGALGHGDRISTNIPREVEALNGCRTI-KAACGVWHSAAVVSVFGEATSSGKL 486
Query: 255 GSVGQLGHCSLQSGDKE--LLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQA 312
+ G L GD E L+P V LD + VACG + AL+ G +YA G +
Sbjct: 487 FTWGDGDDGRLGHGDIECRLIPSCVTELDTTSFQQVACGQSITVALSMSGQVYAMGTADP 546
Query: 313 GQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYN 372
R+ S I F VQ VACG H V ++ WG
Sbjct: 547 SH----DIVRAPSCIEGGLGKSF-----------VQEVACGFHHIAVLNSKAEVYTWGKG 591
Query: 373 SYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVL 411
S GQ + + Y P+ V G +VRK+ G ++A +
Sbjct: 592 SNGQLGHGDTEYRCMPTLVKALKGKQVRKVVCGSNYTATI 631
Score = 151 (58.2 bits), Expect = 4.5e-07, P = 4.5e-07
Identities = 37/111 (33%), Positives = 53/111 (47%)
Query: 66 DIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHC 125
++ACG H A + S ++TWG GQLG G E R P VK L+ + V+ + CG++
Sbjct: 568 EVACGFHHIAVLNSKAEVYTWGKGSNGQLGHGDTEYRCMPTLVKALKGKQVRKVVCGSNY 627
Query: 126 TAAIAEPRENDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGS 176
TA I + GT ST G N+ R + ++ C SC S
Sbjct: 628 TATICLHKPITGTDSTK---CSGCRHPFNYMRKLHNCYNCGSVFCN-SCTS 674
>ZFIN|ZDB-GENE-090311-7 [details] [associations]
symbol:si:ch211-281g13.5 "si:ch211-281g13.5"
species:7955 "Danio rerio" [GO:0006464 "cellular protein
modification process" evidence=IEA] [GO:0004842 "ubiquitin-protein
ligase activity" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] Pfam:PF00632 InterPro:IPR000569 PROSITE:PS50237
SMART:SM00119 INTERPRO:IPR000408 Pfam:PF00415
ZFIN:ZDB-GENE-090311-7 GO:GO:0016567 GO:GO:0005622
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 SUPFAM:SSF56204
eggNOG:COG5021 HOGENOM:HOG000208452 HOVERGEN:HBG050878
GeneTree:ENSGT00700000104312 EMBL:BX321880 IPI:IPI00899041
RefSeq:NP_001139103.1 UniGene:Dr.155114 Ensembl:ENSDART00000113315
GeneID:100148091 OMA:TLAWFPS NextBio:20791722 Uniprot:B8A4S7
Length = 992
Score = 243 (90.6 bits), Expect = 3.8e-17, P = 3.8e-17
Identities = 75/231 (32%), Positives = 110/231 (47%)
Query: 108 VKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTSRLWVWGQN-QGS-NFPRLFWGAFTP 165
+K L++ V I+CG + A++ NDG +L+VWG+N G + G +P
Sbjct: 109 LKSLENRQVIQIACGDQHSMALS----NDG-----QLFVWGENTHGQLGLRKEQAGTQSP 159
Query: 166 NTI--IC-----QVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYA 218
+ +C Q+S G H LS G++ WG N GQLG G T + P ++K
Sbjct: 160 QHLQSLCEIPVAQISAGGNHSFVLSLSGVVFGWGSNSAGQLGLGDTKDRFV-PTIVKSLC 218
Query: 219 KFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVV 278
+K +SCG H+A +S+ G V+T+G G GQLGH SL+ E PR +
Sbjct: 219 G--------KKTVSISCGGEHTATLSKGGTVFTFGSGGFGQLGHNSLKD---EHHPRLIA 267
Query: 279 ALDGIFIKDVACGGVHSCALTSKGAL-YAWGGSQAGQLGLGPQTRSFSLIP 328
L G + V CG H+ L Y++G GQLG G Q + +P
Sbjct: 268 ELWGSKVSQVTCGRHHTLVFEESSKLIYSFGCGMQGQLGNGEQVKQSVPLP 318
Score = 222 (83.2 bits), Expect = 8.0e-15, P = 8.0e-15
Identities = 63/206 (30%), Positives = 104/206 (50%)
Query: 61 NSRWLDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEE-GRKHPEKVKQLQSEFVKSI 119
N + + IACG +H+ A+++DG LF WG N GQLG E+ G + P+ ++ L V I
Sbjct: 114 NRQVIQIACGDQHSMALSNDGQLFVWGENTHGQLGLRKEQAGTQSPQHLQSLCEIPVAQI 173
Query: 120 SCGA-HC-TAAIAEPRENDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSV 177
S G H +++ G+ S +L + G + P + T+ +SCG
Sbjct: 174 SAGGNHSFVLSLSGVVFGWGSNSAGQLGL-GDTKDRFVPTIVKSLCGKKTV--SISCGGE 230
Query: 178 HVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGE 237
H LS+ G + +G +GQLG + + PR+I A+ K++QV+CG
Sbjct: 231 HTATLSKGGTVFTFGSGGFGQLGHN-SLKDEHHPRLI---AELWGS-----KVSQVTCGR 281
Query: 238 YHSAAVSENGE-VYTWGLGSVGQLGH 262
+H+ E+ + +Y++G G GQLG+
Sbjct: 282 HHTLVFEESSKLIYSFGCGMQGQLGN 307
Score = 221 (82.9 bits), Expect = 1.0e-14, P = 1.0e-14
Identities = 58/214 (27%), Positives = 103/214 (48%)
Query: 226 ELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFI 285
E ++ Q++CG+ HS A+S +G+++ WG + GQLG Q+G + P+ + +L I +
Sbjct: 113 ENRQVIQIACGDQHSMALSNDGQLFVWGENTHGQLGLRKEQAGTQS--PQHLQSLCEIPV 170
Query: 286 KDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPN 345
++ GG HS L+ G ++ WG + AGQLGLG F +P T ++ L
Sbjct: 171 AQISAGGNHSFVLSLSGVVFGWGSNSAGQLGLGDTKDRF--VP----TIVKS---LCGKK 221
Query: 346 GVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAG 404
V ++CG HT + G + +G +GQ + +P + G +V ++ G
Sbjct: 222 TVS-ISCGGEHTATLSKGGTVFTFGSGGFGQLGHNSLKDEHHPRLIAELWGSKVSQVTCG 280
Query: 405 GGHSAVLADACSLKELCEFRLAESVTLSNASEIE 438
H+ V ++ L + F L N +++
Sbjct: 281 RHHTLVFEESSKL--IYSFGCGMQGQLGNGEQVK 312
Score = 189 (71.6 bits), Expect = 3.4e-11, P = 3.4e-11
Identities = 60/189 (31%), Positives = 88/189 (46%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++VWG N GQ G + + + P+ L L P I+ G H+ ++ G
Sbjct: 136 LFVWGENTHGQLGLRKEQAGTQSPQHLQ-SLCEIPVA------QISAGGNHSFVLSLSGV 188
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
+F WG+N GQLG G + R P VK L + SISCG TA +++ GT+ T
Sbjct: 189 VFGWGSNSAGQLGLGDTKDRFVPTIVKSLCGKKTVSISCGGEHTATLSK----GGTVFTF 244
Query: 143 RLWVWGQ---N--QGSNFPRLF---WGAFTPNTIICQVSCGSVHVVALSECG-LLQAWGY 193
+GQ N + + PRL WG+ + QV+CG H + E L+ ++G
Sbjct: 245 GSGGFGQLGHNSLKDEHHPRLIAELWGSK-----VSQVTCGRHHTLVFEESSKLIYSFGC 299
Query: 194 NEYGQLGRG 202
GQLG G
Sbjct: 300 GMQGQLGNG 308
Score = 157 (60.3 bits), Expect = 1.0e-07, P = 1.0e-07
Identities = 51/186 (27%), Positives = 87/186 (46%)
Query: 228 EKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKD 287
E+I + CGE + ++++G+V +V C K L R+V+
Sbjct: 76 ERIRSIVCGEAGAVLLADDGKVLIMDQSTV-----CRPL---KSLENRQVI--------Q 119
Query: 288 VACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGV 347
+ACG HS AL++ G L+ WG + GQLGL + +S + +++ +P V
Sbjct: 120 IACGDQHSMALSNDGQLFVWGENTHGQLGLRKEQAG-----TQSPQHLQSL--CEIP--V 170
Query: 348 QLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPV-DWCVGEVRKLAAGGG 406
++ G +H+ V G + GWG NS GQ + + P+ V C + ++ GG
Sbjct: 171 AQISAGGNHSFVLSLSGVVFGWGSNSAGQLGLGDTKDRFVPTIVKSLCGKKTVSISCGGE 230
Query: 407 HSAVLA 412
H+A L+
Sbjct: 231 HTATLS 236
>RGD|1306897 [details] [associations]
symbol:Nek8 "NIMA-related kinase 8" species:10116 "Rattus
norvegicus" [GO:0004674 "protein serine/threonine kinase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0072372
"primary cilium" evidence=IEA;ISO] InterPro:IPR000719
InterPro:IPR002290 InterPro:IPR008271 InterPro:IPR011009
InterPro:IPR017441 Pfam:PF00069 PROSITE:PS00107 PROSITE:PS00108
PROSITE:PS50011 SMART:SM00220 RGD:1306897 INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005524 SUPFAM:SSF56112 GO:GO:0004674
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0072372
PRINTS:PR00633 PROSITE:PS50012 EMBL:CH473948 KO:K08857
GeneTree:ENSGT00700000104137 CTD:284086 OrthoDB:EOG4PZJ65
IPI:IPI00369945 RefSeq:NP_001099274.1 UniGene:Rn.144705
Ensembl:ENSRNOT00000017264 GeneID:287473 KEGG:rno:287473
NextBio:626264 Uniprot:D3ZGQ5
Length = 698
Score = 240 (89.5 bits), Expect = 4.6e-17, P = 4.6e-17
Identities = 88/305 (28%), Positives = 135/305 (44%)
Query: 67 IACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCT 126
+ACG TA + G + T+G+ G LG G+ P V+ L + ++CGA
Sbjct: 402 VACGDLFTACLTDRGIIMTFGSGSNGCLGHGSLTDISQPTIVEALLGYEMVQVACGASHV 461
Query: 127 AAIAEPREND--GTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSE 184
A++ E G RL + G + N P+ P +V CG + L+
Sbjct: 462 LALSADGELFAWGRGDGGRLGL-GTRESHNCPQQV--PMVPGQEAQRVVCGIDCSMILTS 518
Query: 185 CGLLQAWGYNEYGQLGRGITCEGLQGPRV----IKGYAKF--LDEAP-ELEKITQVSCGE 237
G + A G N + +LG + C L+ V ++ F L AP + E + V G
Sbjct: 519 PGRVLACGSNRFNKLG--LDCLSLEEEPVPHQQVEEALSFTPLGSAPLDRETLLCVDLGT 576
Query: 238 YHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCA 297
HSAAV+ +G YT+G GQLG S + P RV L+GI + VACG + A
Sbjct: 577 AHSAAVTASGACYTFGSNQHGQLGTSSRRVSRA---PCRVQGLEGIKMVMVACGDAFTVA 633
Query: 298 LTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHT 357
+ ++G +Y+WG G+LG + +T+ P V V+C H +T
Sbjct: 634 IGAEGEVYSWGKGARGRLGRRDEDAGLPRPVQLDETH---------PYTVTSVSCCHGNT 684
Query: 358 LVYMR 362
L+ +R
Sbjct: 685 LLAVR 689
Score = 227 (85.0 bits), Expect = 1.3e-15, P = 1.3e-15
Identities = 67/227 (29%), Positives = 105/227 (46%)
Query: 65 LDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAH 124
+ +ACG H A+++DG LF WG + G+LG GT E P++V + + + + CG
Sbjct: 452 VQVACGASHVLALSADGELFAWGRGDGGRLGLGTRESHNCPQQVPMVPGQEAQRVVCGID 511
Query: 125 CTAAIAEP---------REND-GT--ISTSRLWVWGQN--QGSNFPRLFWGAFTPNTIIC 170
C+ + P R N G +S V Q + +F L T++C
Sbjct: 512 CSMILTSPGRVLACGSNRFNKLGLDCLSLEEEPVPHQQVEEALSFTPLGSAPLDRETLLC 571
Query: 171 QVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKI 230
V G+ H A++ G +G N++GQLG RV + + + E K+
Sbjct: 572 -VDLGTAHSAAVTASGACYTFGSNQHGQLGTS-------SRRVSRAPCRV--QGLEGIKM 621
Query: 231 TQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRV 277
V+CG+ + A+ GEVY+WG G+ G+LG +G LPR V
Sbjct: 622 VMVACGDAFTVAIGAEGEVYSWGKGARGRLGRRDEDAG----LPRPV 664
Score = 222 (83.2 bits), Expect = 4.6e-15, P = 4.6e-15
Identities = 77/239 (32%), Positives = 111/239 (46%)
Query: 142 SRLWVWGQNQGSNFP-RLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLG 200
S ++ WG G + P RL PNT + QV+ G ++ G L W G G
Sbjct: 318 SSVYAWGG--GLSIPLRLPM----PNTEVVQVAAGRTQKAGVTRSGRLILWEAPPLGT-G 370
Query: 201 RGITCEG---LQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSV 257
G G L P+ + ++FL E I V+CG+ +A +++ G + T+G GS
Sbjct: 371 GGTLLPGAVELPQPQFV---SRFL-EGQSGVTIKHVACGDLFTACLTDRGIIMTFGSGSN 426
Query: 258 GQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGL 317
G LGH SL + P V AL G + VACG H AL++ G L+AWG G+LGL
Sbjct: 427 GCLGHGSLTDISQ---PTIVEALLGYEMVQVACGASHVLALSADGELFAWGRGDGGRLGL 483
Query: 318 GPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQ 376
G TR ES + +P +V Q V CG +++ GR+ G N + +
Sbjct: 484 G--TR-------ESHNCPQQVP-MVPGQEAQRVVCGIDCSMILTSPGRVLACGSNRFNK 532
Score = 193 (73.0 bits), Expect = 7.3e-12, P = 7.3e-12
Identities = 60/241 (24%), Positives = 106/241 (43%)
Query: 169 ICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELE 228
I V+CG + L++ G++ +G G LG G + + P +++ +
Sbjct: 399 IKHVACGDLFTACLTDRGIIMTFGSGSNGCLGHGSLTD-ISQPTIVEALLGY-------- 449
Query: 229 KITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDV 288
++ QV+CG H A+S +GE++ WG G G+LG L + + P++V + G + V
Sbjct: 450 EMVQVACGASHVLALSADGELFAWGRGDGGRLG---LGTRESHNCPQQVPMVPGQEAQRV 506
Query: 289 ACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNES-DTYFRNIPILVVPNGV 347
CG S LTS G + A G ++ +LGL + +P++ + P+ P
Sbjct: 507 VCGIDCSMILTSPGRVLACGSNRFNKLGLDCLSLEEEPVPHQQVEEALSFTPLGSAPLDR 566
Query: 348 QLVAC---GHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAG 404
+ + C G +H+ G + +G N +GQ + P V G + A
Sbjct: 567 ETLLCVDLGTAHSAAVTASGACYTFGSNQHGQLGTSSRRVSRAPCRVQGLEGIKMVMVAC 626
Query: 405 G 405
G
Sbjct: 627 G 627
>UNIPROTKB|F1NAG9 [details] [associations]
symbol:NEK9 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0004674 "protein serine/threonine kinase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0019901 "protein kinase binding"
evidence=IEA] InterPro:IPR000719 InterPro:IPR002290
InterPro:IPR008271 InterPro:IPR011009 Pfam:PF00069 PROSITE:PS00108
PROSITE:PS50011 SMART:SM00220 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005739 GO:GO:0005524 SUPFAM:SSF56112 GO:GO:0004674
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS50012 GeneTree:ENSGT00700000104074
OMA:GCDGTFL EMBL:AADN02003466 IPI:IPI00598995
Ensembl:ENSGALT00000016792 Uniprot:F1NAG9
Length = 984
Score = 242 (90.2 bits), Expect = 4.9e-17, P = 4.9e-17
Identities = 101/396 (25%), Positives = 166/396 (41%)
Query: 47 KQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGTLFTW-----GANEFGQLGDGTEEG 101
K P +L +G ++R + G+ H A V + L+TW G GQLG G
Sbjct: 366 KSTPQKLDAIKSGCSAR--QVCAGNTHFAVVTVEKELYTWVNMQGGTKLHGQLGHGDRAS 423
Query: 102 RKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRE--NDGTISTSRLWVWGQNQGSN-FPRL 158
+ P+ V++LQ + ++ +SCG T I + + G+ + + + GS L
Sbjct: 424 YRQPKHVEKLQGKAIRQVSCGDDFTVCITDEGQLYAFGSDYYGCIGI-DKAYGSEVLEPL 482
Query: 159 FWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYA 218
F N + QVSCG HV L+ + WG EYG+LG E P+ +
Sbjct: 483 QLDFFLTNPVE-QVSCGDNHVAVLTRNREVYTWGCGEYGRLGLDSE-EDHYTPQKV---- 536
Query: 219 KFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSG----DKEL-L 273
+ P+ I V CG + +++ G+V GL +LG SG D +
Sbjct: 537 ----DVPKTLNIVSVHCGCDGTFLLTQTGKVLACGLNEFNKLGLNQCTSGIINHDTYCEV 592
Query: 274 PRRV---VALDGIF--IKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIP 328
P +A F I+ ++ G H+ ++ +G L +G ++ GQLG+G +
Sbjct: 593 PYATSLTLAKQLSFYKIRTISPGKTHTASIDERGRLLTFGSNKCGQLGVGDYKKHLG--- 649
Query: 329 NESDTYFRNIPILVVP-NGVQL--VACGHSHTLVYMRDGRIHGWGYNSYGQAA---NEKS 382
I +L P G Q+ V+CG T+ D I WG G+ A E++
Sbjct: 650 ---------INLLAGPLGGKQVIRVSCGDEFTIAATDDNHIFAWGNGGNGRLAMTPTERA 700
Query: 383 -----TYAWYPSPVDWCVGEVRKLAAGGGHSAVLAD 413
+W P P+ + V L+ G H+ ++ +
Sbjct: 701 HGSDICTSW-PRPIFGSLHHVPDLSCRGWHTIIVVE 735
Score = 166 (63.5 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 65/273 (23%), Positives = 118/273 (43%)
Query: 67 IACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCT 126
++CG H A + + ++TWG E+G+LG +EE P+KV ++ + S+ CG T
Sbjct: 495 VSCGDNHVAVLTRNREVYTWGCGEYGRLGLDSEEDHYTPQKVDVPKTLNIVSVHCGCDGT 554
Query: 127 AAIAEPRE--NDGTISTSRLWVWGQNQGS-NFPRLFWGAF-TPNTIICQ--------VSC 174
+ + + G ++L + G N + T T+ Q +S
Sbjct: 555 FLLTQTGKVLACGLNEFNKLGLNQCTSGIINHDTYCEVPYATSLTLAKQLSFYKIRTISP 614
Query: 175 GSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVS 234
G H ++ E G L +G N+ GQLG G + L G ++ G +++ +VS
Sbjct: 615 GKTHTASIDERGRLLTFGSNKCGQLGVGDYKKHL-GINLLAGPLGG-------KQVIRVS 666
Query: 235 CGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELL----PRRVVALDGIFIKDVAC 290
CG+ + A +++ ++ WG G G+L + + PR + + D++C
Sbjct: 667 CGDEFTIAATDDNHIFAWGNGGNGRLAMTPTERAHGSDICTSWPRPIFG-SLHHVPDLSC 725
Query: 291 GGVHSCALTSKGALYAWGGSQAGQLGLGPQTRS 323
G H+ + K S + L +G T+S
Sbjct: 726 RGWHTIIVVEKVLNSKTIRSNSSGLSIGTVTQS 758
Score = 151 (58.2 bits), Expect = 4.7e-07, P = 4.7e-07
Identities = 54/200 (27%), Positives = 88/200 (44%)
Query: 138 TISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAW-----G 192
T TS ++VWG G + P+ A QV G+ H ++ L W G
Sbjct: 353 TSRTSEVYVWGG--GKSTPQKL-DAIKSGCSARQVCAGNTHFAVVTVEKELYTWVNMQGG 409
Query: 193 YNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTW 252
+GQLG G Q P+ ++ K +A I QVSCG+ + +++ G++Y +
Sbjct: 410 TKLHGQLGHGDRASYRQ-PKHVE---KLQGKA-----IRQVSCGDDFTVCITDEGQLYAF 460
Query: 253 GLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQA 312
G G +G G + L P ++ ++ V+CG H LT +Y WG +
Sbjct: 461 GSDYYGCIG-IDKAYGSEVLEPLQLDFFLTNPVEQVSCGDNHVAVLTRNREVYTWGCGEY 519
Query: 313 GQLGLGPQTRSFSLIPNESD 332
G+LGL + ++ P + D
Sbjct: 520 GRLGLDSEEDHYT--PQKVD 537
>UNIPROTKB|Q8TD19 [details] [associations]
symbol:NEK9 "Serine/threonine-protein kinase Nek9"
species:9606 "Homo sapiens" [GO:0004674 "protein serine/threonine
kinase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0046872
"metal ion binding" evidence=IEA] [GO:0051301 "cell division"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0019901
"protein kinase binding" evidence=IPI] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005739 "mitochondrion" evidence=IDA]
InterPro:IPR000719 InterPro:IPR002290 InterPro:IPR008271
InterPro:IPR011009 Pfam:PF00069 PROSITE:PS00107 PROSITE:PS00108
PROSITE:PS50011 SMART:SM00220 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005739 GO:GO:0005524 GO:GO:0005634 GO:GO:0051301
GO:GO:0007067 GO:GO:0046872 eggNOG:COG0515 SUPFAM:SSF56112
GO:GO:0004674 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
EMBL:AC007055 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
KO:K08857 CleanEx:HS_NEK8 EMBL:AY048580 EMBL:AY080896 EMBL:AB082526
EMBL:BC009336 EMBL:BC093881 EMBL:BC112101 IPI:IPI00301609
RefSeq:NP_149107.4 UniGene:Hs.7200 ProteinModelPortal:Q8TD19
SMR:Q8TD19 IntAct:Q8TD19 MINT:MINT-2984282 STRING:Q8TD19
PhosphoSite:Q8TD19 DMDM:116242675 PaxDb:Q8TD19 PeptideAtlas:Q8TD19
PRIDE:Q8TD19 DNASU:91754 Ensembl:ENST00000238616 GeneID:91754
KEGG:hsa:91754 UCSC:uc001xrl.3 CTD:91754 GeneCards:GC14M075548
HGNC:HGNC:18591 HPA:HPA001405 MIM:609798 neXtProt:NX_Q8TD19
PharmGKB:PA38593 HOVERGEN:HBG039572 InParanoid:Q8TD19 OMA:GCDGTFL
OrthoDB:EOG4NZTSM PhylomeDB:Q8TD19 BindingDB:Q8TD19
ChEMBL:CHEMBL5257 GenomeRNAi:91754 NextBio:77443
ArrayExpress:Q8TD19 Bgee:Q8TD19 CleanEx:HS_NEK9
Genevestigator:Q8TD19 GermOnline:ENSG00000119638 Uniprot:Q8TD19
Length = 979
Score = 241 (89.9 bits), Expect = 6.3e-17, P = 6.3e-17
Identities = 110/435 (25%), Positives = 182/435 (41%)
Query: 10 TARPVDNIPAK-SAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIA 68
T P+ + ++ S +YVWG G K ++L + K GC A +
Sbjct: 335 TEAPIAVVTSRTSEVYVWG-------GGKSTPQKLDVIKS------GCSAR------QVC 375
Query: 69 CGHEHTAAVASDGTLFTW-----GANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGA 123
G+ H A V + L+TW G GQLG G + + P+ V++LQ + ++ +SCG
Sbjct: 376 AGNTHFAVVTVEKELYTWVNMQGGTKLHGQLGHGDKASYRQPKHVEKLQGKAIRQVSCGD 435
Query: 124 HCTAAIAEPRENDGTISTSRLWVWGQNQGSNFPRLF----WGAFTPNTIICQVSCGSVHV 179
T + + + + G ++ + P + F N + QVSCG HV
Sbjct: 436 DFTVCVTDEGQLYA-FGSDYYGCMGVDKVAG-PEVLEPMQLNFFLSNPVE-QVSCGDNHV 492
Query: 180 VALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYH 239
V L+ + +WG EYG+LG E P+ + + P+ I V CG
Sbjct: 493 VVLTRNKEVYSWGCGEYGRLGLDSE-EDYYTPQKV--------DVPKALIIVAVQCGCDG 543
Query: 240 SAAVSENGEVYTWGLGSVGQLGHCSLQSG--DKEL---LPRRV---VALDGIF--IKDVA 289
+ ++++G+V GL +LG SG + E +P +A F I+ +A
Sbjct: 544 TFLLTQSGKVLACGLNEFNKLGLNQCMSGIINHEAYHEVPYTTSFTLAKQLSFYKIRTIA 603
Query: 290 CGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVP-NGVQ 348
G H+ A+ +G L +G ++ GQLG+G + I +L P G Q
Sbjct: 604 PGKTHTAAIDERGRLLTFGCNKCGQLGVGNYKKRLG------------INLLGGPLGGKQ 651
Query: 349 L--VACGHSHTLVYMRDGRIHGWGYNSYGQAA---NEKS-----TYAWYPSPVDWCVGEV 398
+ V+CG T+ D I WG G+ A E+ +W P P+ + V
Sbjct: 652 VIRVSCGDEFTIAATDDNHIFAWGNGGNGRLAMTPTERPHGSDICTSW-PRPIFGSLHHV 710
Query: 399 RKLAAGGGHSAVLAD 413
L+ G H+ ++ +
Sbjct: 711 PDLSCRGWHTILIVE 725
Score = 157 (60.3 bits), Expect = 1.0e-07, P = 1.0e-07
Identities = 61/254 (24%), Positives = 112/254 (44%)
Query: 67 IACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCT 126
++CG H + + +++WG E+G+LG +EE P+KV ++ + ++ CG T
Sbjct: 485 VSCGDNHVVVLTRNKEVYSWGCGEYGRLGLDSEEDYYTPQKVDVPKALIIVAVQCGCDGT 544
Query: 127 AAIAEPRE--NDGTISTSRLWVWGQNQ---GS-NFPRLFWGAFTPN-TIICQVSC----- 174
+ + + G ++L G NQ G N +T + T+ Q+S
Sbjct: 545 FLLTQSGKVLACGLNEFNKL---GLNQCMSGIINHEAYHEVPYTTSFTLAKQLSFYKIRT 601
Query: 175 ---GSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKIT 231
G H A+ E G L +G N+ GQLG G + L G ++ G +++
Sbjct: 602 IAPGKTHTAAIDERGRLLTFGCNKCGQLGVGNYKKRL-GINLLGGPLGG-------KQVI 653
Query: 232 QVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELL----PRRVVALDGIFIKD 287
+VSCG+ + A +++ ++ WG G G+L + + PR + + D
Sbjct: 654 RVSCGDEFTIAATDDNHIFAWGNGGNGRLAMTPTERPHGSDICTSWPRPIFG-SLHHVPD 712
Query: 288 VACGGVHSCALTSK 301
++C G H+ + K
Sbjct: 713 LSCRGWHTILIVEK 726
>RGD|1307187 [details] [associations]
symbol:Nek9 "NIMA-related kinase 9" species:10116 "Rattus
norvegicus" [GO:0004674 "protein serine/threonine kinase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005739
"mitochondrion" evidence=ISO] [GO:0019901 "protein kinase binding"
evidence=ISO] InterPro:IPR000719 InterPro:IPR002290
InterPro:IPR008271 InterPro:IPR011009 InterPro:IPR017441
Pfam:PF00069 PROSITE:PS00107 PROSITE:PS00108 PROSITE:PS50011
SMART:SM00220 RGD:1307187 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005739 GO:GO:0005524 SUPFAM:SSF56112 GO:GO:0004674
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PROSITE:PS50012 OMA:GCDGTFL OrthoDB:EOG4NZTSM IPI:IPI00870835
Ensembl:ENSRNOT00000009300 UCSC:RGD:1307187 ArrayExpress:D4A4B2
Uniprot:D4A4B2
Length = 975
Score = 240 (89.5 bits), Expect = 8.0e-17, P = 8.0e-17
Identities = 111/435 (25%), Positives = 181/435 (41%)
Query: 10 TARPVDNIPAK-SAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIA 68
T P+ + ++ S +YVWG G K ++L + K GC A +
Sbjct: 333 TEAPIAVVTSRTSEVYVWG-------GGKSTPQKLDVIKS------GCSAR------QVC 373
Query: 69 CGHEHTAAVASDGTLFTW-----GANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGA 123
G+ H A V + L+TW G GQLG G + + P+ V++LQ + + +SCG
Sbjct: 374 AGNTHFAVVTVEKELYTWVNMQGGTKLHGQLGHGDKASYRQPKHVEKLQGKAIHQVSCGD 433
Query: 124 HCTAAIAEPRENDGTISTSRLWVWGQNQGSNFPRLF----WGAFTPNTIICQVSCGSVHV 179
T + + + + G ++ S P + F N + QVSCG HV
Sbjct: 434 DFTVCVTDEGQLYA-FGSDYYGCMGVDKVSG-PEVLEPMQLNFFLSNPVE-QVSCGDNHV 490
Query: 180 VALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYH 239
V L+ + +WG EYG+LG E P+ + + P+ I V CG
Sbjct: 491 VVLTRNKEVYSWGCGEYGRLGLDSE-EDYYTPQRV--------DVPKALIIVAVQCGCDG 541
Query: 240 SAAVSENGEVYTWGLGSVGQLGHCSLQSG--DKEL---LPRRV---VALDGIF--IKDVA 289
+ ++++G+V GL +LG SG + E +P +A F I+ +A
Sbjct: 542 TFLLTQSGKVLACGLNEFNKLGLNQCMSGIINHEAYHEVPYTTSFTLAKQLSFYKIRTIA 601
Query: 290 CGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVP-NGVQ 348
G H+ A+ +G L +G ++ GQLG+G + I +L P G Q
Sbjct: 602 PGKTHTAAIDERGRLLTFGCNKCGQLGVGNYKKRLG------------INLLGGPLGGKQ 649
Query: 349 L--VACGHSHTLVYMRDGRIHGWGYNSYGQAA---NEKS-----TYAWYPSPVDWCVGEV 398
+ V+CG T+ D I WG G+ A E+ +W P P+ + V
Sbjct: 650 VIRVSCGDEFTIAATDDNHIFAWGNGGNGRLAMTPTERPHGSDICTSW-PRPIFGSLHHV 708
Query: 399 RKLAAGGGHSAVLAD 413
L+ G H+ ++ +
Sbjct: 709 PDLSCRGWHTILIVE 723
Score = 155 (59.6 bits), Expect = 1.7e-07, P = 1.7e-07
Identities = 65/278 (23%), Positives = 120/278 (43%)
Query: 67 IACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCT 126
++CG H + + +++WG E+G+LG +EE P++V ++ + ++ CG T
Sbjct: 483 VSCGDNHVVVLTRNKEVYSWGCGEYGRLGLDSEEDYYTPQRVDVPKALIIVAVQCGCDGT 542
Query: 127 AAIAEPRE--NDGTISTSRLWVWGQNQ---GS-NFPRLFWGAFTPN-TIICQVSC----- 174
+ + + G ++L G NQ G N +T + T+ Q+S
Sbjct: 543 FLLTQSGKVLACGLNEFNKL---GLNQCMSGIINHEAYHEVPYTTSFTLAKQLSFYKIRT 599
Query: 175 ---GSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKIT 231
G H A+ E G L +G N+ GQLG G + L G ++ G +++
Sbjct: 600 IAPGKTHTAAIDERGRLLTFGCNKCGQLGVGNYKKRL-GINLLGGPLGG-------KQVI 651
Query: 232 QVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELL----PRRVVALDGIFIKD 287
+VSCG+ + A +++ ++ WG G G+L + + PR + + D
Sbjct: 652 RVSCGDEFTIAATDDNHIFAWGNGGNGRLAMTPTERPHGSDICTSWPRPIFG-SLHHVPD 710
Query: 288 VACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFS 325
++C G H+ + K S + L +G +S S
Sbjct: 711 LSCRGWHTILIVEKVLNSKTIRSNSSGLSIGTVVQSSS 748
>MGI|MGI:2387995 [details] [associations]
symbol:Nek9 "NIMA (never in mitosis gene a)-related
expressed kinase 9" species:10090 "Mus musculus" [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0004672 "protein kinase
activity" evidence=IEA] [GO:0004674 "protein serine/threonine
kinase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0006468 "protein phosphorylation"
evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA] [GO:0007067
"mitosis" evidence=IEA] [GO:0016301 "kinase activity" evidence=IEA]
[GO:0016310 "phosphorylation" evidence=IEA] [GO:0016740
"transferase activity" evidence=IEA] [GO:0016772 "transferase
activity, transferring phosphorus-containing groups" evidence=IEA]
[GO:0019901 "protein kinase binding" evidence=ISO] [GO:0046872
"metal ion binding" evidence=IEA] [GO:0051301 "cell division"
evidence=IEA] InterPro:IPR000719 InterPro:IPR002290
InterPro:IPR008271 InterPro:IPR011009 Pfam:PF00069 PROSITE:PS00107
PROSITE:PS00108 PROSITE:PS50011 SMART:SM00220 MGI:MGI:2387995
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005739 GO:GO:0005524
GO:GO:0005634 GO:GO:0019901 GO:GO:0051301 GO:GO:0007067
GO:GO:0046872 eggNOG:COG0515 SUPFAM:SSF56112 GO:GO:0004674
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 EMBL:CH466590
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 KO:K08857
GeneTree:ENSGT00700000104074 CTD:91754 HOVERGEN:HBG039572
OMA:GCDGTFL OrthoDB:EOG4NZTSM EMBL:AJ489828 EMBL:BC024926
EMBL:BC117971 EMBL:BC117972 IPI:IPI00169806 RefSeq:NP_660120.2
UniGene:Mm.29071 ProteinModelPortal:Q8K1R7 SMR:Q8K1R7
DIP:DIP-56880N IntAct:Q8K1R7 STRING:Q8K1R7 PhosphoSite:Q8K1R7
PaxDb:Q8K1R7 PRIDE:Q8K1R7 Ensembl:ENSMUST00000040992 GeneID:217718
KEGG:mmu:217718 InParanoid:Q148U2 NextBio:375996 Bgee:Q8K1R7
Genevestigator:Q8K1R7 GermOnline:ENSMUSG00000034290 Uniprot:Q8K1R7
Length = 984
Score = 240 (89.5 bits), Expect = 8.1e-17, P = 8.1e-17
Identities = 111/435 (25%), Positives = 181/435 (41%)
Query: 10 TARPVDNIPAK-SAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIA 68
T P+ + ++ S +YVWG G K ++L + K GC A +
Sbjct: 335 TEAPIAVVTSRTSEVYVWG-------GGKSTPQKLDVIKS------GCSAR------QVC 375
Query: 69 CGHEHTAAVASDGTLFTW-----GANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGA 123
G+ H A V + L+TW G GQLG G + + P+ V++LQ + + +SCG
Sbjct: 376 AGNTHFAVVTVEKELYTWVNMQGGTKLHGQLGHGDKASYRQPKHVEKLQGKAIHQVSCGD 435
Query: 124 HCTAAIAEPRENDGTISTSRLWVWGQNQGSNFPRLF----WGAFTPNTIICQVSCGSVHV 179
T + + + + G ++ S P + F N + QVSCG HV
Sbjct: 436 DFTVCVTDEGQLYA-FGSDYYGCMGVDKVSG-PEVLEPMQLNFFLSNPVE-QVSCGDNHV 492
Query: 180 VALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYH 239
V L+ + +WG EYG+LG E P+ + + P+ I V CG
Sbjct: 493 VVLTRNKEVYSWGCGEYGRLGLDSE-EDYYTPQRV--------DVPKALIIVAVQCGCDG 543
Query: 240 SAAVSENGEVYTWGLGSVGQLGHCSLQSG--DKEL---LPRRV---VALDGIF--IKDVA 289
+ ++++G+V GL +LG SG + E +P +A F I+ +A
Sbjct: 544 TFLLTQSGKVLACGLNEFNKLGLNQCMSGIINHEAYHEVPYTTSFTLAKQLSFYKIRTIA 603
Query: 290 CGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVP-NGVQ 348
G H+ A+ +G L +G ++ GQLG+G + I +L P G Q
Sbjct: 604 PGKTHTAAIDERGRLLTFGCNKCGQLGVGNYKKRLG------------INLLGGPLGGKQ 651
Query: 349 L--VACGHSHTLVYMRDGRIHGWGYNSYGQAA---NEKS-----TYAWYPSPVDWCVGEV 398
+ V+CG T+ D I WG G+ A E+ +W P P+ + V
Sbjct: 652 VIRVSCGDEFTIAATDDNHIFAWGNGGNGRLAMTPTERPHGSDICTSW-PRPIFGSLHHV 710
Query: 399 RKLAAGGGHSAVLAD 413
L+ G H+ ++ +
Sbjct: 711 PDLSCRGWHTILIVE 725
Score = 155 (59.6 bits), Expect = 1.7e-07, P = 1.7e-07
Identities = 65/278 (23%), Positives = 120/278 (43%)
Query: 67 IACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCT 126
++CG H + + +++WG E+G+LG +EE P++V ++ + ++ CG T
Sbjct: 485 VSCGDNHVVVLTRNKEVYSWGCGEYGRLGLDSEEDYYTPQRVDVPKALIIVAVQCGCDGT 544
Query: 127 AAIAEPRE--NDGTISTSRLWVWGQNQ---GS-NFPRLFWGAFTPN-TIICQVSC----- 174
+ + + G ++L G NQ G N +T + T+ Q+S
Sbjct: 545 FLLTQSGKVLACGLNEFNKL---GLNQCMSGIINHEAYHEVPYTTSFTLAKQLSFYKIRT 601
Query: 175 ---GSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKIT 231
G H A+ E G L +G N+ GQLG G + L G ++ G +++
Sbjct: 602 IAPGKTHTAAIDERGRLLTFGCNKCGQLGVGNYKKRL-GINLLGGPLGG-------KQVI 653
Query: 232 QVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELL----PRRVVALDGIFIKD 287
+VSCG+ + A +++ ++ WG G G+L + + PR + + D
Sbjct: 654 RVSCGDEFTIAATDDNHIFAWGNGGNGRLAMTPTERPHGSDICTSWPRPIFG-SLHHVPD 712
Query: 288 VACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFS 325
++C G H+ + K S + L +G +S S
Sbjct: 713 LSCRGWHTILIVEKVLNSKTIRSNSSGLSIGTVVQSSS 750
>ZFIN|ZDB-GENE-090311-16 [details] [associations]
symbol:si:ch211-281g13.4 "si:ch211-281g13.4"
species:7955 "Danio rerio" [GO:0006464 "cellular protein
modification process" evidence=IEA] [GO:0004842 "ubiquitin-protein
ligase activity" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] Pfam:PF00632 InterPro:IPR000569 PROSITE:PS50237
SMART:SM00119 INTERPRO:IPR000408 Pfam:PF00415
ZFIN:ZDB-GENE-090311-16 GO:GO:0016567 GO:GO:0005622
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 SUPFAM:SSF56204
eggNOG:COG5021 HOGENOM:HOG000208452 HOVERGEN:HBG050878
GeneTree:ENSGT00700000104312 EMBL:BX321880 IPI:IPI00923765
RefSeq:NP_001139174.1 UniGene:Dr.150552 Ensembl:ENSDART00000138510
GeneID:794323 NextBio:20931808 Uniprot:B8A4S5
Length = 985
Score = 240 (89.5 bits), Expect = 8.1e-17, P = 8.1e-17
Identities = 75/231 (32%), Positives = 110/231 (47%)
Query: 108 VKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTSRLWVWGQNQGSNFPRLFWGAF--TP 165
+K L + V I+CG + A++ NDG +L+VWG+N A +P
Sbjct: 112 LKGLDNTKVIQIACGDQHSVALS----NDG-----QLFVWGENAHGQLGLRKEQALIQSP 162
Query: 166 NTI--IC-----QVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYA 218
+ +C Q+S G H LS G++ WG N GQLG G T + P ++K +
Sbjct: 163 QHLQSLCGIPVAQISAGGNHSFVLSLSGVVFGWGSNSAGQLGLGDTTDRFV-PTIVKSLS 221
Query: 219 KFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVV 278
+K +SCG H+A +S+ G V+T+G G GQLGH SL+ E PR V
Sbjct: 222 G--------KKTVSISCGGEHTATLSKGGTVFTFGSGGFGQLGHNSLKD---EHHPRLVA 270
Query: 279 ALDGIFIKDVACGGVHSCALTS-KGALYAWGGSQAGQLGLGPQTRSFSLIP 328
L G + V CG H+ L + +Y++G GQLG G Q + +P
Sbjct: 271 ELWGSKVSQVTCGRHHTLVLVALTNRIYSFGCGMQGQLGNGEQVKQSVPLP 321
Score = 223 (83.6 bits), Expect = 6.1e-15, P = 6.1e-15
Identities = 55/184 (29%), Positives = 93/184 (50%)
Query: 229 KITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDV 288
K+ Q++CG+ HS A+S +G+++ WG + GQLG Q+ + P+ + +L GI + +
Sbjct: 119 KVIQIACGDQHSVALSNDGQLFVWGENAHGQLGLRKEQALIQS--PQHLQSLCGIPVAQI 176
Query: 289 ACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQ 348
+ GG HS L+ G ++ WG + AGQLGLG T F +P T +++
Sbjct: 177 SAGGNHSFVLSLSGVVFGWGSNSAGQLGLGDTTDRF--VP----TIVKSLS----GKKTV 226
Query: 349 LVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGH 407
++CG HT + G + +G +GQ + +P V G +V ++ G H
Sbjct: 227 SISCGGEHTATLSKGGTVFTFGSGGFGQLGHNSLKDEHHPRLVAELWGSKVSQVTCGRHH 286
Query: 408 SAVL 411
+ VL
Sbjct: 287 TLVL 290
Score = 212 (79.7 bits), Expect = 1.0e-13, P = 1.0e-13
Identities = 61/206 (29%), Positives = 102/206 (49%)
Query: 61 NSRWLDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGR-KHPEKVKQLQSEFVKSI 119
N++ + IACG +H+ A+++DG LF WG N GQLG E+ + P+ ++ L V I
Sbjct: 117 NTKVIQIACGDQHSVALSNDGQLFVWGENAHGQLGLRKEQALIQSPQHLQSLCGIPVAQI 176
Query: 120 SCGA-HC-TAAIAEPRENDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSV 177
S G H +++ G+ S +L + G P + T+ +SCG
Sbjct: 177 SAGGNHSFVLSLSGVVFGWGSNSAGQLGL-GDTTDRFVPTIVKSLSGKKTV--SISCGGE 233
Query: 178 HVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGE 237
H LS+ G + +G +GQLG + + PR++ A+ K++QV+CG
Sbjct: 234 HTATLSKGGTVFTFGSGGFGQLGHN-SLKDEHHPRLV---AELWGS-----KVSQVTCGR 284
Query: 238 YHSAA-VSENGEVYTWGLGSVGQLGH 262
+H+ V+ +Y++G G GQLG+
Sbjct: 285 HHTLVLVALTNRIYSFGCGMQGQLGN 310
Score = 192 (72.6 bits), Expect = 1.6e-11, P = 1.6e-11
Identities = 60/189 (31%), Positives = 89/189 (47%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++VWG N GQ G + + ++ P+ L L G P I+ G H+ ++ G
Sbjct: 139 LFVWGENAHGQLGLRKEQALIQSPQHLQ-SLCGIPVA------QISAGGNHSFVLSLSGV 191
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
+F WG+N GQLG G R P VK L + SISCG TA +++ GT+ T
Sbjct: 192 VFGWGSNSAGQLGLGDTTDRFVPTIVKSLSGKKTVSISCGGEHTATLSK----GGTVFTF 247
Query: 143 RLWVWGQ---N--QGSNFPRL---FWGAFTPNTIICQVSCGSVHVVAL-SECGLLQAWGY 193
+GQ N + + PRL WG+ + QV+CG H + L + + ++G
Sbjct: 248 GSGGFGQLGHNSLKDEHHPRLVAELWGSK-----VSQVTCGRHHTLVLVALTNRIYSFGC 302
Query: 194 NEYGQLGRG 202
GQLG G
Sbjct: 303 GMQGQLGNG 311
Score = 185 (70.2 bits), Expect = 9.1e-11, P = 9.1e-11
Identities = 59/188 (31%), Positives = 83/188 (44%)
Query: 230 ITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVA 289
+ Q+S G HS +S +G V+ WG S GQLG L +P V +L G ++
Sbjct: 173 VAQISAGGNHSFVLSLSGVVFGWGSNSAGQLG---LGDTTDRFVPTIVKSLSGKKTVSIS 229
Query: 290 CGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQL 349
CGG H+ L+ G ++ +G GQLG SL D + + + + V
Sbjct: 230 CGGEHTATLSKGGTVFTFGSGGFGQLGHN------SL----KDEHHPRLVAELWGSKVSQ 279
Query: 350 VACGHSHTLVYMR-DGRIHGWGYNSYGQAANEKSTYAWYPSPV----DW-CVGEVRKLAA 403
V CG HTLV + RI+ +G GQ N + P PV D C + K+ A
Sbjct: 280 VTCGRHHTLVLVALTNRIYSFGCGMQGQLGNGEQVKQSVPLPVLLPTDCNCEFTMEKIIA 339
Query: 404 GGGHSAVL 411
G HS L
Sbjct: 340 GEKHSFAL 347
Score = 169 (64.5 bits), Expect = 5.1e-09, P = 5.1e-09
Identities = 54/186 (29%), Positives = 89/186 (47%)
Query: 228 EKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKD 287
EKI + CGE + +++ G+V DK + R + LD +
Sbjct: 79 EKIRSIVCGEDGAVLLADGGKVLLM----------------DKYTVCRPLKGLDNTKVIQ 122
Query: 288 VACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGV 347
+ACG HS AL++ G L+ WG + GQLGL + +LI +S + +++ +P V
Sbjct: 123 IACGDQHSVALSNDGQLFVWGENAHGQLGLRKEQ---ALI--QSPQHLQSL--CGIP--V 173
Query: 348 QLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVR-KLAAGGG 406
++ G +H+ V G + GWG NS GQ +T + P+ V G+ ++ GG
Sbjct: 174 AQISAGGNHSFVLSLSGVVFGWGSNSAGQLGLGDTTDRFVPTIVKSLSGKKTVSISCGGE 233
Query: 407 HSAVLA 412
H+A L+
Sbjct: 234 HTATLS 239
>UNIPROTKB|F1Q1C6 [details] [associations]
symbol:WBSCR16 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0005739 "mitochondrion" evidence=IEA]
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005739 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS50012
GeneTree:ENSGT00700000104312 OMA:MVTLAKS EMBL:AAEX03004216
EMBL:AAEX03004217 Ensembl:ENSCAFT00000018027 Uniprot:F1Q1C6
Length = 465
Score = 220 (82.5 bits), Expect = 3.2e-15, P = 3.2e-15
Identities = 81/316 (25%), Positives = 134/316 (42%)
Query: 20 KSAIYVWGY--NHSGQTG--RKGRERQLRIPKQLPPELFGCPAGA--NSRWLDIACGHEH 73
K VWG N Q G R +++ L P P +R L ++CG H
Sbjct: 127 KDVTKVWGMGLNKDSQLGFHRSHKDKTRGYEYVLEPSPVPLPLDRPQETRVLQVSCGRAH 186
Query: 74 TAAVASDGTLFTWGANEFGQLGDGTEEGRKHPE--KVKQLQSEF---VKSISCGAHCTAA 128
+ + +F+ G N +GQ G E + E KV ++Q +F V + CG +
Sbjct: 187 SLILTDCEGVFSMGNNAYGQCGRNVVENEIYSESHKVNRMQ-DFDGQVVQVVCGQDHSLF 245
Query: 129 IAEPRE--NDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECG 186
+ + E + G + + + G ++ P G ++ + G + +E G
Sbjct: 246 LTDKGEVYSCGWGADGQTGL-GHYDITSVPTKLGGDLAGVNVVQVATYGDCCLAVSAEGG 304
Query: 187 LLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSEN 246
L WG +EY QL + PR + F + K+ Q +CG A ++
Sbjct: 305 LF-GWGNSEYLQLASVTDSTQVNVPRCLP----FSG----VGKVKQAACGGTGCAVLNGE 355
Query: 247 GEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALD----GIFIKDVACGGVHSCALTSKG 302
G V+ WG G +G+ G +++ E++P + L G+ + + CG H ALTSKG
Sbjct: 356 GHVFVWGYGILGK-GPNLVETAFPEVIPPTLFGLTEFNPGVHVSHIWCGLSHFAALTSKG 414
Query: 303 ALYAWGGSQAGQLGLG 318
L+ WG + G LG+G
Sbjct: 415 ELFVWGKNIRGCLGIG 430
Score = 211 (79.3 bits), Expect = 9.2e-17, Sum P(2) = 9.2e-17
Identities = 64/217 (29%), Positives = 105/217 (48%)
Query: 167 TIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPE 226
T + QVSCG H + L++C + + G N YGQ GR + I + ++ +
Sbjct: 175 TRVLQVSCGRAHSLILTDCEGVFSMGNNAYGQCGRNVV------ENEIYSESHKVNRMQD 228
Query: 227 LE-KITQVSCGEYHSAAVSENGEVYTWGLGSVGQ--LGHCSLQSGDKELLPRRVVA-LDG 282
+ ++ QV CG+ HS +++ GEVY+ G G+ GQ LGH + S +P ++ L G
Sbjct: 229 FDGQVVQVVCGQDHSLFLTDKGEVYSCGWGADGQTGLGHYDITS-----VPTKLGGDLAG 283
Query: 283 IFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILV 342
+ + VA G A++++G L+ WG S+ QL + + +P R +P
Sbjct: 284 VNVVQVATYGDCCLAVSAEGGLFGWGNSEYLQLASVTDSTQVN-VP-------RCLPFSG 335
Query: 343 VPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAAN 379
V V+ ACG + V +G + WGY G+ N
Sbjct: 336 VGK-VKQAACGGTGCAVLNGEGHVFVWGYGILGKGPN 371
Score = 174 (66.3 bits), Expect = 1.7e-12, Sum P(2) = 1.7e-12
Identities = 57/193 (29%), Positives = 90/193 (46%)
Query: 223 EAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSG--DKELLPRRVVAL 280
+ P+ ++ QVSCG HS +++ V++ G + GQ G +++ + R+
Sbjct: 170 DRPQETRVLQVSCGRAHSLILTDCEGVFSMGNNAYGQCGRNVVENEIYSESHKVNRMQDF 229
Query: 281 DGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPI 340
DG ++ V CG HS LT KG +Y+ G GQ GLG + +P + +
Sbjct: 230 DGQVVQ-VVCGQDHSLFLTDKGEVYSCGWGADGQTGLGHY--DITSVPTKLGGDLAGV-- 284
Query: 341 LVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAAN-EKSTYAWYPSPVDWC-VGEV 398
N VQ+ G L +G + GWG + Y Q A+ ST P + + VG+V
Sbjct: 285 ----NVVQVATYGDC-CLAVSAEGGLFGWGNSEYLQLASVTDSTQVNVPRCLPFSGVGKV 339
Query: 399 RKLAAGGGHSAVL 411
++ A GG AVL
Sbjct: 340 KQAACGGTGCAVL 352
Score = 131 (51.2 bits), Expect = 2.5e-05, P = 2.5e-05
Identities = 37/110 (33%), Positives = 51/110 (46%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPA-GANSRWLDIACGHEHTAAVASDG 81
++VWGY G G+ + P+ +PP LFG I CG H AA+ S G
Sbjct: 358 VFVWGY---GILGKGPNLVETAFPEVIPPTLFGLTEFNPGVHVSHIWCGLSHFAALTSKG 414
Query: 82 TLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAE 131
LF WG N G LG G E + P +V + E V ++CG +A+
Sbjct: 415 ELFVWGKNIRGCLGIGRLEDQYFPWRVT-MPGEPV-DVACGVDHMVTLAK 462
Score = 66 (28.3 bits), Expect = 9.2e-17, Sum P(2) = 9.2e-17
Identities = 31/117 (26%), Positives = 52/117 (44%)
Query: 5 EIIGETARPVDNIPAKSAIYVWGYNHSGQTG-------RKGRERQL--RIPKQLPPELFG 55
+ +GE A D + +VWG++ SG G R G ER+ R P+++ P +
Sbjct: 50 QYVGERAARADRV------FVWGFSFSGALGVPTFVLPRAGPERRAGSRPPRRIQPVPYR 103
Query: 56 CPAGANSRWLDIACGHEHT--AAVASDGT-LFTWGANEFGQLGDGTEEGRKHPEKVK 109
+ + ACG+ T ++ D T ++ G N+ QLG R H +K +
Sbjct: 104 LEL--DQKISSAACGYGFTLLSSKTKDVTKVWGMGLNKDSQLGFH----RSHKDKTR 154
>UNIPROTKB|Q86SG6 [details] [associations]
symbol:NEK8 "Serine/threonine-protein kinase Nek8"
species:9606 "Homo sapiens" [GO:0004674 "protein serine/threonine
kinase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005856 "cytoskeleton"
evidence=IEA] [GO:0072372 "primary cilium" evidence=ISS]
InterPro:IPR000719 InterPro:IPR002290 InterPro:IPR008271
InterPro:IPR011009 InterPro:IPR017441 Pfam:PF00069 PROSITE:PS00107
PROSITE:PS00108 PROSITE:PS50011 SMART:SM00220 INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005524 GO:GO:0005737 GO:GO:0005856
GO:GO:0046872 eggNOG:COG0515 SUPFAM:SSF56112 GO:GO:0004674
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0072372
EMBL:CH471159 PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626
PROSITE:PS50012 KO:K08857 Orphanet:655 EMBL:AC010761 CTD:284086
HOGENOM:HOG000006908 HOVERGEN:HBG098799 EMBL:AY242354 EMBL:AY267371
EMBL:BC112240 EMBL:BC113705 EMBL:AL833909 IPI:IPI00328397
RefSeq:NP_835464.1 UniGene:Hs.448468 ProteinModelPortal:Q86SG6
SMR:Q86SG6 IntAct:Q86SG6 STRING:Q86SG6 PhosphoSite:Q86SG6
DMDM:34098463 PaxDb:Q86SG6 PRIDE:Q86SG6 DNASU:284086
Ensembl:ENST00000268766 GeneID:284086 KEGG:hsa:284086
UCSC:uc002hcp.3 GeneCards:GC17P027055 HGNC:HGNC:13387 HPA:HPA040661
HPA:HPA040679 MIM:609799 MIM:613824 neXtProt:NX_Q86SG6
PharmGKB:PA38361 InParanoid:Q86SG6 OMA:EREVFAW OrthoDB:EOG4PZJ65
GenomeRNAi:284086 NextBio:94527 ArrayExpress:Q86SG6 Bgee:Q86SG6
CleanEx:HS_NEK8 Genevestigator:Q86SG6 GermOnline:ENSG00000160602
Uniprot:Q86SG6
Length = 692
Score = 237 (88.5 bits), Expect = 9.8e-17, P = 9.8e-17
Identities = 84/303 (27%), Positives = 137/303 (45%)
Query: 67 IACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCT 126
+ACG TA + G + T+G+ G LG G+ P V+ L + ++CGA
Sbjct: 396 VACGDFFTACLTDRGIIMTFGSGSNGCLGHGSLTDISQPTIVEALLGYEMVQVACGASHV 455
Query: 127 AAIAEPREND--GTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSE 184
A++ RE G + RL + G + + P+ P +V CG + L+
Sbjct: 456 LALSTERELFAWGRGDSGRLGL-GTRESHSCPQQV--PMPPGQEAQRVVCGIDSSMILTV 512
Query: 185 CGLLQAWGYNEYGQLGRGITCEGLQG-P-RVIKGYAKF--LDEAP-ELEKITQVSCGEYH 239
G A G N + +LG G + P + ++ F L AP + E + + G H
Sbjct: 513 PGQALACGSNRFNKLGLDHLSLGEEPVPHQQVEEALSFTLLGSAPLDQEPLLSIDLGTAH 572
Query: 240 SAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALT 299
SAAV+ +G+ YT+G GQLG + + G + P +V L+GI + VACG + A+
Sbjct: 573 SAAVTASGDCYTFGSNQHGQLG-TNTRRGSRA--PCKVQGLEGIKMAMVACGDAFTVAIG 629
Query: 300 SKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLV 359
++ +Y+WG G+LG + +T+ P V V+C H +TL+
Sbjct: 630 AESEVYSWGKGARGRLGRRDEDAGLPRPVQLDETH---------PYTVTSVSCCHGNTLL 680
Query: 360 YMR 362
+R
Sbjct: 681 AVR 683
Score = 211 (79.3 bits), Expect = 7.4e-14, P = 7.4e-14
Identities = 73/253 (28%), Positives = 116/253 (45%)
Query: 142 SRLWVWGQNQGS--NFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQL 199
S ++ WG G+ P L NT + QV+ G ++ G L W G
Sbjct: 312 SSVYAWGGGLGTPLRLPML-------NTEVVQVAAGRTQKAGVTRSGRLILWEAPPLGAG 364
Query: 200 GRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQ 259
G + ++ P+ + ++FL E I V+CG++ +A +++ G + T+G GS G
Sbjct: 365 GGSLLPGAVEQPQP-QFISRFL-EGQSGVTIKHVACGDFFTACLTDRGIIMTFGSGSNGC 422
Query: 260 LGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGP 319
LGH SL + P V AL G + VACG H AL+++ L+AWG +G+LGLG
Sbjct: 423 LGHGSLTDISQ---PTIVEALLGYEMVQVACGASHVLALSTERELFAWGRGDSGRLGLG- 478
Query: 320 QTRSFSLIPNESDTYFRNIPILVVPNG--VQLVACGHSHTLVYMRDGRIHGWGYNSYGQA 377
TR ES + + +P+ P G Q V CG +++ G+ G N + +
Sbjct: 479 -TR-------ESHSCPQQVPM---PPGQEAQRVVCGIDSSMILTVPGQALACGSNRFNKL 527
Query: 378 ANEKSTYAWYPSP 390
+ + P P
Sbjct: 528 GLDHLSLGEEPVP 540
Score = 195 (73.7 bits), Expect = 4.3e-12, P = 4.3e-12
Identities = 60/226 (26%), Positives = 101/226 (44%)
Query: 65 LDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAH 124
+ +ACG H A++++ LF WG + G+LG GT E P++V + + + CG
Sbjct: 446 VQVACGASHVLALSTERELFAWGRGDSGRLGLGTRESHSCPQQVPMPPGQEAQRVVCGID 505
Query: 125 CTAAIAEPREN--DGTISTSRLWVWGQNQGSN-FPR----------LFWGAFTPNTIICQ 171
+ + P + G+ ++L + + G P L A +
Sbjct: 506 SSMILTVPGQALACGSNRFNKLGLDHLSLGEEPVPHQQVEEALSFTLLGSAPLDQEPLLS 565
Query: 172 VSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKIT 231
+ G+ H A++ G +G N++GQLG T G + P ++G E K+
Sbjct: 566 IDLGTAHSAAVTASGDCYTFGSNQHGQLGTN-TRRGSRAPCKVQGL--------EGIKMA 616
Query: 232 QVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRV 277
V+CG+ + A+ EVY+WG G+ G+LG +G LPR V
Sbjct: 617 MVACGDAFTVAIGAESEVYSWGKGARGRLGRRDEDAG----LPRPV 658
Score = 167 (63.8 bits), Expect = 5.2e-09, P = 5.2e-09
Identities = 59/250 (23%), Positives = 105/250 (42%)
Query: 169 ICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELE 228
I V+CG L++ G++ +G G LG G + + P +++ +
Sbjct: 393 IKHVACGDFFTACLTDRGIIMTFGSGSNGCLGHGSLTD-ISQPTIVEALLGY-------- 443
Query: 229 KITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDV 288
++ QV+CG H A+S E++ WG G G+LG L + + P++V G + V
Sbjct: 444 EMVQVACGASHVLALSTERELFAWGRGDSGRLG---LGTRESHSCPQQVPMPPGQEAQRV 500
Query: 289 ACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNE------SDTYFRNIPILV 342
CG S LT G A G ++ +LGL + +P++ S T + P+
Sbjct: 501 VCGIDSSMILTVPGQALACGSNRFNKLGLDHLSLGEEPVPHQQVEEALSFTLLGSAPLDQ 560
Query: 343 VPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKL 401
P + + G +H+ G + +G N +GQ + P V G ++ +
Sbjct: 561 EP--LLSIDLGTAHSAAVTASGDCYTFGSNQHGQLGTNTRRGSRAPCKVQGLEGIKMAMV 618
Query: 402 AAGGGHSAVL 411
A G + +
Sbjct: 619 ACGDAFTVAI 628
>ZFIN|ZDB-GENE-020509-1 [details] [associations]
symbol:nek8 "NIMA (never in mitosis gene a)-related
kinase 8" species:7955 "Danio rerio" [GO:0004672 "protein kinase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0006468 "protein phosphorylation" evidence=IEA] [GO:0016772
"transferase activity, transferring phosphorus-containing groups"
evidence=IEA] [GO:0004674 "protein serine/threonine kinase
activity" evidence=IEA] [GO:0016301 "kinase activity" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0007049 "cell
cycle" evidence=IEA] [GO:0016310 "phosphorylation" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0007067 "mitosis"
evidence=IEA] [GO:0016740 "transferase activity" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0061326 "renal tubule development" evidence=IMP]
[GO:0072116 "pronephros formation" evidence=IGI] [GO:0072372
"primary cilium" evidence=IDA] [GO:0001947 "heart looping"
evidence=IGI] InterPro:IPR000719 InterPro:IPR002290
InterPro:IPR008271 InterPro:IPR011009 InterPro:IPR017441
Pfam:PF00069 PROSITE:PS00107 PROSITE:PS00108 PROSITE:PS50011
SMART:SM00220 INTERPRO:IPR000408 Pfam:PF00415
ZFIN:ZDB-GENE-020509-1 GO:GO:0005524 GO:GO:0005737 GO:GO:0051301
GO:GO:0007067 GO:GO:0046872 eggNOG:COG0515 SUPFAM:SSF56112
GO:GO:0004674 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
GO:GO:0072372 GO:GO:0001947 PRINTS:PR00633 PROSITE:PS00625
PROSITE:PS00626 PROSITE:PS50012 KO:K08857 EMBL:AF407580
IPI:IPI00770181 RefSeq:NP_620776.1 UniGene:Dr.12587
ProteinModelPortal:Q90XC2 GeneID:171094 KEGG:dre:171094 CTD:284086
HOGENOM:HOG000006908 HOVERGEN:HBG098799 InParanoid:Q90XC2
NextBio:20797120 ArrayExpress:Q90XC2 GO:GO:0072116 GO:GO:0061326
Uniprot:Q90XC2
Length = 697
Score = 236 (88.1 bits), Expect = 1.3e-16, P = 1.3e-16
Identities = 83/296 (28%), Positives = 134/296 (45%)
Query: 31 SGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGTLFTWGANE 90
SG+ G Q++ P+ + L G +G + ++CG T + G + T+G+
Sbjct: 371 SGEPTLPGAVEQMQ-PQFISRFLEG-QSGVTIK--SVSCGDLFTTCLTDRGIIMTFGSGS 426
Query: 91 FGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRE--NDGTISTSRLWVWG 148
G LG G P+ V+ L + +SCGA A+ RE + G RL +
Sbjct: 427 NGCLGHGNFNDVTQPKIVEALLGYELVQVSCGASHVLAVTNEREVFSWGRGDNGRLGLAT 486
Query: 149 QNQGSNFPRLFW--GAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCE 206
Q+ N P+ F ++C V C + +S + A G N + +LG
Sbjct: 487 QDS-HNCPQQVSLPADFEAQRVLCGVDCSMI----MSTQHQILACGNNRFNKLGLD-KVS 540
Query: 207 GLQGP----RVIKGYA-KFLDEAP-ELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQL 260
G + P +V + + + + AP EKI + G HS AV+E G+ +T+G GQL
Sbjct: 541 GTEEPSSFCQVEEVHLFQLVQSAPLNTEKIVYIDIGTAHSVAVTEKGQCFTFGSNQHGQL 600
Query: 261 GHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLG 316
G CS + + +P +V L GI + ACG + A+ ++G +Y WG G+LG
Sbjct: 601 G-CSHRRSSR--VPYQVSGLQGITM--AACGDAFTLAIGAEGEVYTWGKGARGRLG 651
Score = 187 (70.9 bits), Expect = 3.3e-11, P = 3.3e-11
Identities = 86/349 (24%), Positives = 144/349 (41%)
Query: 61 NSRWLDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEG---RKHPEKVKQL---QSE 114
N+ + ++ G V G L TW A G G+ T G + P+ + + QS
Sbjct: 339 NTEVIQVSLGRTQKMGVTKSGRLITWEAPSVGS-GEPTLPGAVEQMQPQFISRFLEGQSG 397
Query: 115 F-VKSISCGAHCTAAIAEPRENDGTISTSRLWVWGQNQGSNF--PRLFWGAFTPNTIICQ 171
+KS+SCG T + + R T + G ++ P++ A ++ Q
Sbjct: 398 VTIKSVSCGDLFTTCLTD-RGIIMTFGSGSNGCLGHGNFNDVTQPKIV-EALLGYELV-Q 454
Query: 172 VSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKIT 231
VSCG+ HV+A++ + +WG + G+LG T + P+ + A F EA + +
Sbjct: 455 VSCGASHVLAVTNEREVFSWGRGDNGRLGLA-TQDSHNCPQQVSLPADF--EAQRV--LC 509
Query: 232 QVSCG----EYHSAAVSENGEVYTWGLGSVGQL----GHCSLQSGDK-ELLPRRVVALDG 282
V C H N GL V C ++ +L+ + +
Sbjct: 510 GVDCSMIMSTQHQILACGNNRFNKLGLDKVSGTEEPSSFCQVEEVHLFQLVQSAPLNTEK 569
Query: 283 IFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILV 342
I D+ G HS A+T KG + +G +Q GQLG + RS S +P +
Sbjct: 570 IVYIDI--GTAHSVAVTEKGQCFTFGSNQHGQLGCSHR-RS-SRVPYQVSGL-------- 617
Query: 343 VPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPV 391
G+ + ACG + TL +G ++ WG + G+ ++ + P PV
Sbjct: 618 --QGITMAACGDAFTLAIGAEGEVYTWGKGARGRLGRKEEDFG-IPKPV 663
>UNIPROTKB|F1MM88 [details] [associations]
symbol:NEK9 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0019901 "protein kinase binding" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004674 "protein serine/threonine kinase
activity" evidence=IEA] InterPro:IPR000719 InterPro:IPR002290
InterPro:IPR008271 InterPro:IPR011009 Pfam:PF00069 PROSITE:PS00108
PROSITE:PS50011 SMART:SM00220 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005739 GO:GO:0005524 SUPFAM:SSF56112 GO:GO:0004674
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PROSITE:PS50012 GeneTree:ENSGT00700000104074 OMA:GCDGTFL
EMBL:DAAA02029619 IPI:IPI00714098 Ensembl:ENSBTAT00000022098
Uniprot:F1MM88
Length = 994
Score = 238 (88.8 bits), Expect = 1.4e-16, P = 1.4e-16
Identities = 102/390 (26%), Positives = 164/390 (42%)
Query: 10 TARPVDNIPAK-SAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIA 68
T P+ + ++ S +YVWG G K ++L + K GC A +
Sbjct: 352 TEAPIAVVTSRTSEVYVWG-------GGKSTPQKLDVIKS------GCSAR------QVC 392
Query: 69 CGHEHTAAVASDGTLFTW-----GANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGA 123
G+ H A V + L+TW G GQLG G + + P+ V++LQ + ++ +SCG
Sbjct: 393 AGNTHFAVVTVEKELYTWVNMQGGTKLHGQLGHGDKASYRQPKHVEKLQGKAIRQVSCGD 452
Query: 124 HCTAAIAEPRENDGTISTSRLWVWGQNQ--GSNFPRLFWGAFTPNTIICQVSCGSVHVVA 181
T + + + + G ++ G+ F + + QVSCG HVV
Sbjct: 453 DFTVCVTDEGQLYA-FGSDYYGCMGVDKVAGAEVLEPMQLDFFLSNPVEQVSCGDNHVVV 511
Query: 182 LSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSA 241
L+ + +WG EYG+LG E P+ + + P+ I V CG +
Sbjct: 512 LTRNKEVYSWGCGEYGRLGLDSE-EDYYTPQKV--------DVPKALIIVAVQCGCDGTF 562
Query: 242 AVSENGEVYTWGLGSVGQLGHCSLQSG--DKEL---LPRRV---VALDGIF--IKDVACG 291
++++G+V GL +LG SG + E +P +A F I+ +A G
Sbjct: 563 LLTQSGKVLACGLNEFNKLGLNQCMSGIINHEAYHEVPYTTSFTLAKQLSFYKIRTIAPG 622
Query: 292 GVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVP-NGVQL- 349
H+ AL +G L +G ++ GQLG+G + I +L P G Q+
Sbjct: 623 KTHTAALDERGRLLTFGCNKCGQLGVGNYKKRLG------------INLLGGPLGGKQVI 670
Query: 350 -VACGHSHTLVYMRDGRIHGWGYNSYGQAA 378
V+CG T+ D I WG G+ A
Sbjct: 671 RVSCGDEFTIAATDDNHIFAWGNGGNGRLA 700
Score = 200 (75.5 bits), Expect = 2.1e-12, P = 2.1e-12
Identities = 82/322 (25%), Positives = 134/322 (41%)
Query: 17 IPAKSAIYVW-----GYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGH 71
+ + +Y W G GQ G G + R PK + +L G R ++CG
Sbjct: 401 VTVEKELYTWVNMQGGTKLHGQLGH-GDKASYRQPKHVE-KL----QGKAIR--QVSCGD 452
Query: 72 EHTAAVASDGTLFTWGANEFGQLGDGTEEGRK--HPEKVKQLQSEFVKSISCGAHCTAAI 129
+ T V +G L+ +G++ +G +G G + P ++ S V+ +SCG + +
Sbjct: 453 DFTVCVTDEGQLYAFGSDYYGCMGVDKVAGAEVLEPMQLDFFLSNPVEQVSCGDNHVVVL 512
Query: 130 AEPRE--NDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNT-IICQVSCGSVHVVALSECG 186
+E + G RL + + P+ P II V CG L++ G
Sbjct: 513 TRNKEVYSWGCGEYGRLGL-DSEEDYYTPQK---VDVPKALIIVAVQCGCDGTFLLTQSG 568
Query: 187 LLQAWGYNEYGQLGRGITCEGLQGPRVIKG--YAKFLDEAPELE--KITQVSCGEYHSAA 242
+ A G NE+ +LG G+ Y A +L KI ++ G+ H+AA
Sbjct: 569 KVLACGLNEFNKLGLNQCMSGIINHEAYHEVPYTTSFTLAKQLSFYKIRTIAPGKTHTAA 628
Query: 243 VSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVA--LDGIFIKDVACGGVHSCALTS 300
+ E G + T+G GQLG K+ L ++ L G + V+CG + A T
Sbjct: 629 LDERGRLLTFGCNKCGQLG----VGNYKKRLGINLLGGPLGGKQVIRVSCGDEFTIAATD 684
Query: 301 KGALYAWGGSQAGQLGLGPQTR 322
++AWG G+L + P R
Sbjct: 685 DNHIFAWGNGGNGRLAMTPTER 706
Score = 192 (72.6 bits), Expect = 1.6e-11, P = 1.6e-11
Identities = 51/163 (31%), Positives = 75/163 (46%)
Query: 232 QVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELL--PRRVVALDGIFIKDVA 289
QV G H A V+ E+YTW G H L GDK P+ V L G I+ V+
Sbjct: 390 QVCAGNTHFAVVTVEKELYTWVNMQGGTKLHGQLGHGDKASYRQPKHVEKLQGKAIRQVS 449
Query: 290 CGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQL 349
CG + +T +G LYA+G G +G+ + L P + D + N P V+
Sbjct: 450 CGDDFTVCVTDEGQLYAFGSDYYGCMGVDKVAGAEVLEPMQLDFFLSN-P-------VEQ 501
Query: 350 VACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVD 392
V+CG +H +V R+ ++ WG YG+ + + P VD
Sbjct: 502 VSCGDNHVVVLTRNKEVYSWGCGEYGRLGLDSEEDYYTPQKVD 544
>MGI|MGI:1890646 [details] [associations]
symbol:Nek8 "NIMA (never in mitosis gene a)-related
expressed kinase 8" species:10090 "Mus musculus" [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0004672 "protein kinase
activity" evidence=IEA] [GO:0004674 "protein serine/threonine
kinase activity" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005856 "cytoskeleton" evidence=IEA]
[GO:0005929 "cilium" evidence=IEA] [GO:0006468 "protein
phosphorylation" evidence=IEA] [GO:0016301 "kinase activity"
evidence=IEA] [GO:0016310 "phosphorylation" evidence=IEA]
[GO:0016740 "transferase activity" evidence=IEA] [GO:0016772
"transferase activity, transferring phosphorus-containing groups"
evidence=IEA] [GO:0042995 "cell projection" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0072372 "primary
cilium" evidence=IDA] InterPro:IPR000719 InterPro:IPR002290
InterPro:IPR008271 InterPro:IPR011009 InterPro:IPR017441
Pfam:PF00069 PROSITE:PS00107 PROSITE:PS00108 PROSITE:PS50011
SMART:SM00220 MGI:MGI:1890646 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005524 GO:GO:0005737 GO:GO:0005856 GO:GO:0046872
eggNOG:COG0515 SUPFAM:SSF56112 GO:GO:0004674 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0072372 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 KO:K08857
GeneTree:ENSGT00700000104137 CTD:284086 HOGENOM:HOG000006908
HOVERGEN:HBG098799 OMA:EREVFAW OrthoDB:EOG4PZJ65 EMBL:AF407579
EMBL:AK154358 EMBL:BC070457 IPI:IPI00135930 RefSeq:NP_543125.1
UniGene:Mm.23788 ProteinModelPortal:Q91ZR4 SMR:Q91ZR4 IntAct:Q91ZR4
MINT:MINT-1341145 STRING:Q91ZR4 PhosphoSite:Q91ZR4 PRIDE:Q91ZR4
Ensembl:ENSMUST00000017549 GeneID:140859 KEGG:mmu:140859
InParanoid:Q91ZR4 NextBio:370021 Bgee:Q91ZR4 Genevestigator:Q91ZR4
GermOnline:ENSMUSG00000017405 Uniprot:Q91ZR4
Length = 698
Score = 235 (87.8 bits), Expect = 1.7e-16, P = 1.7e-16
Identities = 85/303 (28%), Positives = 136/303 (44%)
Query: 67 IACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCT 126
+ACG TA + G + T+G+ G LG G P V+ L + ++CGA
Sbjct: 402 VACGDLFTACLTDRGIIMTFGSGSNGCLGHGNLTDISQPTIVEALLGYEMVQVACGASHV 461
Query: 127 AAIAEPREND--GTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSE 184
A++ E G RL + G + N P+ P +V CG + L+
Sbjct: 462 LALSTDGELFAWGRGDGGRLGL-GTRESHNCPQQV--PVAPGQEAQRVVCGIDSSMILTS 518
Query: 185 CGLLQAWGYNEYGQLGRG-ITCEGLQGP-RVIKGYAKF--LDEAP-ELEKITQVSCGEYH 239
G + A G N + +LG ++ + P + ++ F L AP + E + V G H
Sbjct: 519 PGRVLACGSNRFNKLGLDHLSLDEEPVPYQQVEEALSFTPLGSAPLDQEPLLCVDLGTAH 578
Query: 240 SAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALT 299
SAA++ +G+ YT+G GQLG S + P RV L+GI + VACG + A+
Sbjct: 579 SAAITASGDCYTFGSNQHGQLGTSSRRVSRA---PCRVQGLEGIKMVMVACGDAFTVAVG 635
Query: 300 SKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLV 359
++G +Y+WG G+LG + +T+ P +V V+C H +TL+
Sbjct: 636 AEGEVYSWGKGTRGRLGRRDEDAGLPRPVQLDETH----PYMVTS-----VSCCHGNTLL 686
Query: 360 YMR 362
+R
Sbjct: 687 AVR 689
Score = 211 (79.3 bits), Expect = 7.6e-14, P = 7.6e-14
Identities = 75/241 (31%), Positives = 108/241 (44%)
Query: 142 SRLWVWGQNQGS--NFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQL 199
S ++ WG S P L NT + QV+ G ++ G L W G
Sbjct: 318 SSVYAWGGGLSSPLRLPML-------NTEVVQVAAGRTQKAGVTRSGRLILWEAPPLGA- 369
Query: 200 GRGITCEG---LQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGS 256
G G G L P+ + ++FL E I V+CG+ +A +++ G + T+G GS
Sbjct: 370 GGGTLLPGAVELPQPQFV---SRFL-EGQSGVTIKHVACGDLFTACLTDRGIIMTFGSGS 425
Query: 257 VGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLG 316
G LGH +L + P V AL G + VACG H AL++ G L+AWG G+LG
Sbjct: 426 NGCLGHGNLTDISQ---PTIVEALLGYEMVQVACGASHVLALSTDGELFAWGRGDGGRLG 482
Query: 317 LGPQTRSFSLIPNESDTYFRNIPILVVPNG-VQLVACGHSHTLVYMRDGRIHGWGYNSYG 375
LG TR ES + +P V P Q V CG +++ GR+ G N +
Sbjct: 483 LG--TR-------ESHNCPQQVP--VAPGQEAQRVVCGIDSSMILTSPGRVLACGSNRFN 531
Query: 376 Q 376
+
Sbjct: 532 K 532
Score = 206 (77.6 bits), Expect = 2.7e-13, P = 2.7e-13
Identities = 63/227 (27%), Positives = 103/227 (45%)
Query: 65 LDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAH 124
+ +ACG H A+++DG LF WG + G+LG GT E P++V + + + CG
Sbjct: 452 VQVACGASHVLALSTDGELFAWGRGDGGRLGLGTRESHNCPQQVPVAPGQEAQRVVCGID 511
Query: 125 CTAAIAEPRE--NDGTISTSRLWV-----------WGQ-NQGSNFPRLFWGAFTPNTIIC 170
+ + P G+ ++L + + Q + +F L ++C
Sbjct: 512 SSMILTSPGRVLACGSNRFNKLGLDHLSLDEEPVPYQQVEEALSFTPLGSAPLDQEPLLC 571
Query: 171 QVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKI 230
V G+ H A++ G +G N++GQLG RV + + + E K+
Sbjct: 572 -VDLGTAHSAAITASGDCYTFGSNQHGQLGTS-------SRRVSRAPCRV--QGLEGIKM 621
Query: 231 TQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRV 277
V+CG+ + AV GEVY+WG G+ G+LG +G LPR V
Sbjct: 622 VMVACGDAFTVAVGAEGEVYSWGKGTRGRLGRRDEDAG----LPRPV 664
Score = 190 (71.9 bits), Expect = 1.6e-11, P = 1.6e-11
Identities = 62/250 (24%), Positives = 106/250 (42%)
Query: 169 ICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELE 228
I V+CG + L++ G++ +G G LG G + + P +++ +
Sbjct: 399 IKHVACGDLFTACLTDRGIIMTFGSGSNGCLGHGNLTD-ISQPTIVEALLGY-------- 449
Query: 229 KITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDV 288
++ QV+CG H A+S +GE++ WG G G+LG L + + P++V G + V
Sbjct: 450 EMVQVACGASHVLALSTDGELFAWGRGDGGRLG---LGTRESHNCPQQVPVAPGQEAQRV 506
Query: 289 ACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNES-DTYFRNIPILVVPNGV 347
CG S LTS G + A G ++ +LGL + +P + + P+ P
Sbjct: 507 VCGIDSSMILTSPGRVLACGSNRFNKLGLDHLSLDEEPVPYQQVEEALSFTPLGSAPLDQ 566
Query: 348 QLVAC---GHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAG 404
+ + C G +H+ G + +G N +GQ + P V G + A
Sbjct: 567 EPLLCVDLGTAHSAAITASGDCYTFGSNQHGQLGTSSRRVSRAPCRVQGLEGIKMVMVAC 626
Query: 405 GGHSAVLADA 414
G V A
Sbjct: 627 GDAFTVAVGA 636
>UNIPROTKB|E1B8U7 [details] [associations]
symbol:RCCD1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005886 "plasma membrane" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005886 GO:GO:0005737 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012
OMA:ERPGAWF GeneTree:ENSGT00700000104312 EMBL:DAAA02052163
IPI:IPI00710464 UniGene:Bt.111664 Ensembl:ENSBTAT00000024803
NextBio:20875558 Uniprot:E1B8U7
Length = 377
Score = 175 (66.7 bits), Expect = 1.8e-16, Sum P(2) = 1.8e-16
Identities = 40/102 (39%), Positives = 62/102 (60%)
Query: 224 APELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGI 283
AP L + ++ G H+ + G+V++WG G GQLGH +L++ E PR + AL G+
Sbjct: 156 APTL-RARRLELGAEHALLLDAAGQVFSWGAGRHGQLGHGTLEA---EPEPRLLEALQGL 211
Query: 284 FIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFS 325
+ +VA GG HS L+ G +Y WG +++GQL L P T+S +
Sbjct: 212 RMAEVAAGGWHSVCLSETGDIYIWGWNESGQLAL-P-TKSLA 251
Score = 141 (54.7 bits), Expect = 5.4e-14, Sum P(2) = 5.4e-14
Identities = 39/108 (36%), Positives = 60/108 (55%)
Query: 189 QAWGYNEYG-QLGRGITCE-GLQGPRV-IKGYAKFLDEAPELEKITQVSCGEYHSAAVSE 245
+A G E G ++ RG E G P + ++ + LD +P E + +VSCG H+A ++
Sbjct: 260 EASGLEEDGSEVKRGSAGEDGAPAPFIAVQPFPALLDLSPGSEAV-KVSCGSRHTAVLTR 318
Query: 246 NGEVYTWGLGSVGQLGHCSLQSGDKELLPRRV-VALDG-IFIKDVACG 291
GE+YTWG G GQLGH + D+ P RV +D + ++ V+CG
Sbjct: 319 TGELYTWGWGKYGQLGHKDTTTLDR---PCRVEYFVDKQLQVRTVSCG 363
Score = 138 (53.6 bits), Expect = 3.3e-12, Sum P(2) = 3.3e-12
Identities = 32/102 (31%), Positives = 51/102 (50%)
Query: 159 FWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYA 218
F+ P ++ G+ H + L G + +WG +GQLG G T E PR++
Sbjct: 151 FYRPLAPTLRARRLELGAEHALLLDAAGQVFSWGAGRHGQLGHG-TLEAEPEPRLL---- 205
Query: 219 KFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQL 260
EA + ++ +V+ G +HS +SE G++Y WG GQL
Sbjct: 206 ----EALQGLRMAEVAAGGWHSVCLSETGDIYIWGWNESGQL 243
Score = 132 (51.5 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 54/184 (29%), Positives = 84/184 (45%)
Query: 63 RWLDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCG 122
R ++A G H+ ++ G ++ WG NE GQL T KS++
Sbjct: 212 RMAEVAAGGWHSVCLSETGDIYIWGWNESGQLALPT------------------KSLAED 253
Query: 123 AHCTAAIAEPRENDGTISTSRLWVWGQNQGSNFPRLFWGAF------TPNTIICQVSCGS 176
TA A E DG S + G++ G+ P + F +P + +VSCGS
Sbjct: 254 GKTTAGEASGLEEDG--SEVKRGSAGED-GAPAPFIAVQPFPALLDLSPGSEAVKVSCGS 310
Query: 177 VHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCG 236
H L+ G L WG+ +YGQLG T L P ++ Y F+D+ +L+ + VSCG
Sbjct: 311 RHTAVLTRTGELYTWGWGKYGQLGHKDTTT-LDRPCRVE-Y--FVDK--QLQ-VRTVSCG 363
Query: 237 EYHS 240
+++
Sbjct: 364 PWNT 367
Score = 116 (45.9 bits), Expect = 0.00079, P = 0.00079
Identities = 35/108 (32%), Positives = 49/108 (45%)
Query: 32 GQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGTLFTWGANEF 91
G G G I Q P L G+ + + ++CG HTA + G L+TWG ++
Sbjct: 274 GSAGEDGAPAPF-IAVQPFPALLDLSPGSEA--VKVSCGSRHTAVLTRTGELYTWGWGKY 330
Query: 92 GQLGDGTEEGRKHPEKV-----KQLQSEFVKSISCGAHCTAAIAEPRE 134
GQLG P +V KQLQ V+++SCG T A +E
Sbjct: 331 GQLGHKDTTTLDRPCRVEYFVDKQLQ---VRTVSCGPWNTYVYAVEKE 375
Score = 113 (44.8 bits), Expect = 5.4e-14, Sum P(2) = 5.4e-14
Identities = 29/102 (28%), Positives = 46/102 (45%)
Query: 50 PPELFGCPAGANSRWLDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVK 109
PP F P R + G EH + + G +F+WGA GQLG GT E P ++
Sbjct: 149 PP--FYRPLAPTLRARRLELGAEHALLLDAAGQVFSWGAGRHGQLGHGTLEAEPEPRLLE 206
Query: 110 QLQSEFVKSISCGAHCTAAIAEPRENDGTISTSRLWVWGQNQ 151
LQ + ++ G + ++E T +++WG N+
Sbjct: 207 ALQGLRMAEVAAGGWHSVCLSE---------TGDIYIWGWNE 239
Score = 99 (39.9 bits), Expect = 1.8e-16, Sum P(2) = 1.8e-16
Identities = 22/66 (33%), Positives = 36/66 (54%)
Query: 350 VACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG---EVRKLAAGGG 406
V+CG HT V R G ++ WG+ YGQ ++ +T P V++ V +VR ++ G
Sbjct: 306 VSCGSRHTAVLTRTGELYTWGWGKYGQLGHKDTTTLDRPCRVEYFVDKQLQVRTVSCGPW 365
Query: 407 HSAVLA 412
++ V A
Sbjct: 366 NTYVYA 371
Score = 88 (36.0 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 23/78 (29%), Positives = 35/78 (44%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
+ A ++ WG GQ G E + P+ P L G R ++A G H+
Sbjct: 174 LDAAGQVFSWGAGRHGQLGHGTLEAE---PE---PRLLEALQGL--RMAEVAAGGWHSVC 225
Query: 77 VASDGTLFTWGANEFGQL 94
++ G ++ WG NE GQL
Sbjct: 226 LSETGDIYIWGWNESGQL 243
Score = 86 (35.3 bits), Expect = 7.4e-11, Sum P(2) = 7.4e-11
Identities = 26/73 (35%), Positives = 36/73 (49%)
Query: 288 VACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGV 347
V+CG H+ LT G LY WG + GQLG T + P + YF + + V
Sbjct: 306 VSCGSRHTAVLTRTGELYTWGWGKYGQLG-HKDTTTLDR-PCRVE-YFVDKQLQV----- 357
Query: 348 QLVACGHSHTLVY 360
+ V+CG +T VY
Sbjct: 358 RTVSCGPWNTYVY 370
>UNIPROTKB|C9JQZ4 [details] [associations]
symbol:RCC1 "Regulator of chromosome condensation"
species:9606 "Homo sapiens" [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0031965 "nuclear
membrane" evidence=IDA] INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0031965 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
EMBL:AL513497 HGNC:HGNC:1913 HOGENOM:HOG000234341 IPI:IPI00925791
ProteinModelPortal:C9JQZ4 SMR:C9JQZ4 STRING:C9JQZ4
Ensembl:ENST00000430407 ArrayExpress:C9JQZ4 Bgee:C9JQZ4
Uniprot:C9JQZ4
Length = 283
Score = 211 (79.3 bits), Expect = 1.8e-16, P = 1.8e-16
Identities = 70/239 (29%), Positives = 113/239 (47%)
Query: 165 PNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEA 224
P ++ Q G +H V LS+ G + ++G N+ G LGR + EG + ++ G +
Sbjct: 66 PEDVV-QAEAGGMHTVCLSKSGQVYSFGCNDEGALGRDTSVEGSE---MVPGKVELQ--- 118
Query: 225 PELEKITQVSCGEYHSAAVSENGEVYTWGL--GSVGQLGHCSLQSGDKELLPRRVVALDG 282
EK+ QVS G+ H+AA++++G V+ WG + G +G L+ K ++P +V LD
Sbjct: 119 ---EKVVQVSAGDSHTAALTDDGRVFLWGSFRDNNGVIG--LLEPMKKSMVPVQV-QLDV 172
Query: 283 IFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILV 342
+K VA G H LT+ G LY G + GQLG P+ L N + + L+
Sbjct: 173 PVVK-VASGNDHLVMLTADGDLYTLGCGEQGQLGRVPE-----LFANRGGR--QGLERLL 224
Query: 343 VPNGVQLVA-------------CGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYP 388
VP V L + CG T +G ++G+G ++Y Q + + P
Sbjct: 225 VPKCVMLKSRGSRGHVRFQDAFCGAYFTFAISHEGHVYGFGLSNYHQLGTPGTESCFIP 283
Score = 162 (62.1 bits), Expect = 2.4e-09, P = 2.4e-09
Identities = 78/288 (27%), Positives = 122/288 (42%)
Query: 1 MDINEIIGETARPVDNIPAKSAIYVWGYNHSGQTGR-----KGRERQL----RIPKQLPP 51
M I + P D IP + V +HS + G +G QL + ++ P
Sbjct: 1 MSPKRIAKRRSPPADAIPKSKKVKVSHRSHSTEPGLVLTLGQGDVGQLGLGENVMERKKP 60
Query: 52 ELFGCPAGANSRWLDIACGHEHTAAVASDGTLFTWGANEFGQLG-DGTEEGRKH-PEKVK 109
L P + G HT ++ G ++++G N+ G LG D + EG + P KV
Sbjct: 61 ALVSIPEDV----VQAEAGGMHTVCLSKSGQVYSFGCNDEGALGRDTSVEGSEMVPGKV- 115
Query: 110 QLQSEFVKSISCGAHCTAAIAEPRENDGTISTSRLWVWGQNQGSN----FPRLFWGAFTP 165
+LQ + V+ +S G TAA+ + DG R+++WG + +N + P
Sbjct: 116 ELQEKVVQ-VSAGDSHTAALTD----DG-----RVFLWGSFRDNNGVIGLLEPMKKSMVP 165
Query: 166 NTI-----ICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRG----ITCEGLQG-PRVIK 215
+ + +V+ G+ H+V L+ G L G E GQLGR G QG R++
Sbjct: 166 VQVQLDVPVVKVASGNDHLVMLTADGDLYTLGCGEQGQLGRVPELFANRGGRQGLERLLV 225
Query: 216 GYAKFLDEAPELEKIT--QVSCGEYHSAAVSENGEVYTWGLGSVGQLG 261
L + CG Y + A+S G VY +GL + QLG
Sbjct: 226 PKCVMLKSRGSRGHVRFQDAFCGAYFTFAISHEGHVYGFGLSNYHQLG 273
>UNIPROTKB|F1RMH6 [details] [associations]
symbol:RCCD1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005886 "plasma membrane" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005886 GO:GO:0005737 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012
OMA:ERPGAWF GeneTree:ENSGT00700000104312 EMBL:CT868688
Ensembl:ENSSSCT00000002041 Uniprot:F1RMH6
Length = 382
Score = 169 (64.5 bits), Expect = 2.1e-16, Sum P(3) = 2.1e-16
Identities = 36/94 (38%), Positives = 59/94 (62%)
Query: 224 APELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGI 283
AP L + ++ G H+ + G+V++WG G GQLGH +L++ ++E PR + AL G+
Sbjct: 161 APTL-RARRLELGAEHALLLDAAGQVFSWGGGRHGQLGHGTLEA-ERE--PRVLEALQGL 216
Query: 284 FIKDVACGGVHSCALTSKGALYAWGGSQAGQLGL 317
+ +VA GG HS ++ G +Y WG +++GQL L
Sbjct: 217 PMAEVAAGGWHSVCVSETGDIYIWGWNESGQLAL 250
Score = 144 (55.7 bits), Expect = 1.9e-13, Sum P(3) = 1.9e-13
Identities = 34/102 (33%), Positives = 51/102 (50%)
Query: 159 FWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYA 218
F+ P ++ G+ H + L G + +WG +GQLG G T E + PRV++
Sbjct: 156 FYRPLAPTLRARRLELGAEHALLLDAAGQVFSWGGGRHGQLGHG-TLEAEREPRVLEA-- 212
Query: 219 KFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQL 260
L P + +V+ G +HS VSE G++Y WG GQL
Sbjct: 213 --LQGLP----MAEVAAGGWHSVCVSETGDIYIWGWNESGQL 248
Score = 130 (50.8 bits), Expect = 1.3e-12, Sum P(2) = 1.3e-12
Identities = 39/106 (36%), Positives = 54/106 (50%)
Query: 192 GYNEYGQLGRGITCEGLQG---PRV-IKGYAKFLDEAPELEKITQVSCGEYHSAAVSENG 247
G NE G + T EG G P + ++ + LD P + SCG H+A V+ G
Sbjct: 268 GLNEDGSEAKRAT-EGEDGGPTPFIAVQPFPALLD-LPLGSDAVKASCGSRHTAVVTRTG 325
Query: 248 EVYTWGLGSVGQLGHCSLQSGDKELLPRRV-VALDG-IFIKDVACG 291
E+YTWG G GQLGH S D+ P RV +D + ++ V+CG
Sbjct: 326 ELYTWGWGKYGQLGHKDTTSLDR---PCRVEYFVDKQLQVRTVSCG 368
Score = 126 (49.4 bits), Expect = 6.4e-05, P = 6.4e-05
Identities = 38/118 (32%), Positives = 54/118 (45%)
Query: 27 GYNHSGQTGRKGRERQLRIPKQL----P-PELFGCPAGANSRWLDIACGHEHTAAVASDG 81
G N G ++ E + P P P L P G+++ + +CG HTA V G
Sbjct: 268 GLNEDGSEAKRATEGEDGGPTPFIAVQPFPALLDLPLGSDA--VKASCGSRHTAVVTRTG 325
Query: 82 TLFTWGANEFGQLGDGTEEGRKHPEKV-----KQLQSEFVKSISCGAHCTAAIAEPRE 134
L+TWG ++GQLG P +V KQLQ V+++SCG T A +E
Sbjct: 326 ELYTWGWGKYGQLGHKDTTSLDRPCRVEYFVDKQLQ---VRTVSCGPWNTYVFAVEKE 380
Score = 120 (47.3 bits), Expect = 0.00027, Sum P(2) = 0.00027
Identities = 50/175 (28%), Positives = 78/175 (44%)
Query: 66 DIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHC 125
++A G H+ V+ G ++ WG NE GQL R E K + + G+
Sbjct: 220 EVAAGGWHSVCVSETGDIYIWGWNESGQLA---LPARSLAEDGKTITGDAPGLNEDGSE- 275
Query: 126 TAAIAEPRENDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSEC 185
A A E+ G T + V FP L + + + SCGS H ++
Sbjct: 276 -AKRATEGEDGGP--TPFIAV------QPFPALLDLPLGSDAV--KASCGSRHTAVVTRT 324
Query: 186 GLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHS 240
G L WG+ +YGQLG T L P ++ Y F+D+ +L+ + VSCG +++
Sbjct: 325 GELYTWGWGKYGQLGHKDTTS-LDRPCRVE-Y--FVDK--QLQ-VRTVSCGPWNT 372
Score = 112 (44.5 bits), Expect = 1.3e-12, Sum P(2) = 1.3e-12
Identities = 28/102 (27%), Positives = 46/102 (45%)
Query: 50 PPELFGCPAGANSRWLDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVK 109
PP F P R + G EH + + G +F+WG GQLG GT E + P ++
Sbjct: 154 PP--FYRPLAPTLRARRLELGAEHALLLDAAGQVFSWGGGRHGQLGHGTLEAEREPRVLE 211
Query: 110 QLQSEFVKSISCGAHCTAAIAEPRENDGTISTSRLWVWGQNQ 151
LQ + ++ G + ++E T +++WG N+
Sbjct: 212 ALQGLPMAEVAAGGWHSVCVSE---------TGDIYIWGWNE 244
Score = 100 (40.3 bits), Expect = 2.1e-16, Sum P(3) = 2.1e-16
Identities = 25/78 (32%), Positives = 41/78 (52%)
Query: 340 ILVVPNGVQLV--ACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG- 396
+L +P G V +CG HT V R G ++ WG+ YGQ ++ +T P V++ V
Sbjct: 299 LLDLPLGSDAVKASCGSRHTAVVTRTGELYTWGWGKYGQLGHKDTTSLDRPCRVEYFVDK 358
Query: 397 --EVRKLAAGGGHSAVLA 412
+VR ++ G ++ V A
Sbjct: 359 QLQVRTVSCGPWNTYVFA 376
Score = 92 (37.4 bits), Expect = 3.4e-07, Sum P(2) = 3.4e-07
Identities = 25/78 (32%), Positives = 36/78 (46%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
+ A ++ WG GQ G E + R P+ L L G P ++A G H+
Sbjct: 179 LDAAGQVFSWGGGRHGQLGHGTLEAE-REPRVLEA-LQGLPMA------EVAAGGWHSVC 230
Query: 77 VASDGTLFTWGANEFGQL 94
V+ G ++ WG NE GQL
Sbjct: 231 VSETGDIYIWGWNESGQL 248
Score = 80 (33.2 bits), Expect = 2.1e-06, Sum P(3) = 2.1e-06
Identities = 22/65 (33%), Positives = 33/65 (50%)
Query: 169 ICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDE-APEL 227
+ +V+ G H V +SE G + WG+NE GQL G + I G A L+E E
Sbjct: 218 MAEVAAGGWHSVCVSETGDIYIWGWNESGQLALPARSLAEDG-KTITGDAPGLNEDGSEA 276
Query: 228 EKITQ 232
++ T+
Sbjct: 277 KRATE 281
Score = 78 (32.5 bits), Expect = 3.3e-11, Sum P(3) = 3.3e-11
Identities = 24/72 (33%), Positives = 35/72 (48%)
Query: 289 ACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQ 348
+CG H+ +T G LY WG + GQLG T S P + YF + + V +
Sbjct: 312 SCGSRHTAVVTRTGELYTWGWGKYGQLG-HKDTTSLDR-PCRVE-YFVDKQLQV-----R 363
Query: 349 LVACGHSHTLVY 360
V+CG +T V+
Sbjct: 364 TVSCGPWNTYVF 375
Score = 42 (19.8 bits), Expect = 2.1e-16, Sum P(3) = 2.1e-16
Identities = 19/62 (30%), Positives = 29/62 (46%)
Query: 22 AIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDG 81
A + +G+ GQ GR RQ+ P+ P E+ P GA+ ++ +TA V G
Sbjct: 8 AWFGFGFCGFGQALGSGRGRQVYSPE--PLEV---P-GASLDVCRVSASWSYTATVTRGG 61
Query: 82 TL 83
L
Sbjct: 62 RL 63
>UNIPROTKB|C9JMJ4 [details] [associations]
symbol:RCC1 "Regulator of chromosome condensation"
species:9606 "Homo sapiens" [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0031965 "nuclear
membrane" evidence=IDA] INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0031965 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
EMBL:AL513497 HGNC:HGNC:1913 HOGENOM:HOG000234341 IPI:IPI00925317
ProteinModelPortal:C9JMJ4 SMR:C9JMJ4 STRING:C9JMJ4
Ensembl:ENST00000419074 ArrayExpress:C9JMJ4 Bgee:C9JMJ4
Uniprot:C9JMJ4
Length = 272
Score = 210 (79.0 bits), Expect = 2.4e-16, P = 2.4e-16
Identities = 69/227 (30%), Positives = 110/227 (48%)
Query: 165 PNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEA 224
P ++ Q G +H V LS+ G + ++G N+ G LGR + EG + ++ G +
Sbjct: 66 PEDVV-QAEAGGMHTVCLSKSGQVYSFGCNDEGALGRDTSVEGSE---MVPGKVELQ--- 118
Query: 225 PELEKITQVSCGEYHSAAVSENGEVYTWGL--GSVGQLGHCSLQSGDKELLPRRVVALDG 282
EK+ QVS G+ H+AA++++G V+ WG + G +G L+ K ++P +V LD
Sbjct: 119 ---EKVVQVSAGDSHTAALTDDGRVFLWGSFRDNNGVIG--LLEPMKKSMVPVQV-QLDV 172
Query: 283 IFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILV 342
+K VA G H LT+ G LY G + GQLG P+ L N + + L+
Sbjct: 173 PVVK-VASGNDHLVMLTADGDLYTLGCGEQGQLGRVPE-----LFANRGGR--QGLERLL 224
Query: 343 VPNGVQLVA-------------CGHSHTLVYMRDGRIHGWGYNSYGQ 376
VP V L + CG T +G ++G+G ++Y Q
Sbjct: 225 VPKCVMLKSRGSRGHVRFQDAFCGAYFTFAISHEGHVYGFGLSNYHQ 271
Score = 156 (60.0 bits), Expect = 1.0e-08, P = 1.0e-08
Identities = 77/287 (26%), Positives = 121/287 (42%)
Query: 1 MDINEIIGETARPVDNIPAKSAIYVWGYNHSGQTGR-----KGRERQL----RIPKQLPP 51
M I + P D IP + V +HS + G +G QL + ++ P
Sbjct: 1 MSPKRIAKRRSPPADAIPKSKKVKVSHRSHSTEPGLVLTLGQGDVGQLGLGENVMERKKP 60
Query: 52 ELFGCPAGANSRWLDIACGHEHTAAVASDGTLFTWGANEFGQLG-DGTEEGRKH-PEKVK 109
L P + G HT ++ G ++++G N+ G LG D + EG + P KV
Sbjct: 61 ALVSIPEDV----VQAEAGGMHTVCLSKSGQVYSFGCNDEGALGRDTSVEGSEMVPGKV- 115
Query: 110 QLQSEFVKSISCGAHCTAAIAEPRENDGTISTSRLWVWGQNQGSN----FPRLFWGAFTP 165
+LQ + V+ +S G TAA+ + DG R+++WG + +N + P
Sbjct: 116 ELQEKVVQ-VSAGDSHTAALTD----DG-----RVFLWGSFRDNNGVIGLLEPMKKSMVP 165
Query: 166 NTI-----ICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRG----ITCEGLQG-PRVIK 215
+ + +V+ G+ H+V L+ G L G E GQLGR G QG R++
Sbjct: 166 VQVQLDVPVVKVASGNDHLVMLTADGDLYTLGCGEQGQLGRVPELFANRGGRQGLERLLV 225
Query: 216 GYAKFLDEAPELEKIT--QVSCGEYHSAAVSENGEVYTWGLGSVGQL 260
L + CG Y + A+S G VY +GL + QL
Sbjct: 226 PKCVMLKSRGSRGHVRFQDAFCGAYFTFAISHEGHVYGFGLSNYHQL 272
Score = 137 (53.3 bits), Expect = 1.7e-06, P = 1.7e-06
Identities = 72/261 (27%), Positives = 108/261 (41%)
Query: 212 RVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKE 271
R+ K + D P+ +K+ +VS H + +E G V T G G VGQLG G+
Sbjct: 5 RIAKRRSPPADAIPKSKKV-KVS----HRSHSTEPGLVLTLGQGDVGQLG-----LGEN- 53
Query: 272 LLPRRVVALDGIFIKDVA---CGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIP 328
++ R+ AL I +DV GG+H+ L+ G +Y++G + G LG ++P
Sbjct: 54 VMERKKPALVSI-PEDVVQAEAGGMHTVCLSKSGQVYSFGCNDEGALGRDTSVEGSEMVP 112
Query: 329 NESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGY---NSYGQAANEKSTYA 385
+ + + V V+ G SHT DGR+ WG N+ E +
Sbjct: 113 GKVE----------LQEKVVQVSAGDSHTAALTDDGRVFLWGSFRDNNGVIGLLEPMKKS 162
Query: 386 WYPSPVDWCVGEVRKLAAGGGHSAVL-ADACSLKELCEFRLAESVTLSNASEI-EDVASR 443
P V V V K+A+G H +L AD +L E L E+ + R
Sbjct: 163 MVPVQVQLDVPVV-KVASGNDHLVMLTADG----DLYTLGCGEQGQLGRVPELFANRGGR 217
Query: 444 TGSEAL-ARLCERLREHSLHG 463
G E L C L+ G
Sbjct: 218 QGLERLLVPKCVMLKSRGSRG 238
Score = 128 (50.1 bits), Expect = 1.8e-05, P = 1.8e-05
Identities = 65/260 (25%), Positives = 110/260 (42%)
Query: 73 HTAAVASDGTLFTWGANEFGQLGDGTEE-GRKHPEKVKQLQSEFVKSISCGAHCTAAIAE 131
H + G + T G + GQLG G RK P V + + V++ + G H T +++
Sbjct: 27 HRSHSTEPGLVLTLGQGDVGQLGLGENVMERKKPALVS-IPEDVVQAEAGGMH-TVCLSK 84
Query: 132 PRE--NDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQ 189
+ + G L G++ + G + QVS G H AL++ G +
Sbjct: 85 SGQVYSFGCNDEGAL---GRDTSVEGSEMVPGKVELQEKVVQVSAGDSHTAALTDDGRVF 141
Query: 190 AWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELE-KITQVSCGEYHSAAVSENGE 248
WG + G+ GL P +K + +L+ + +V+ G H ++ +G+
Sbjct: 142 LWG--SFRD-NNGVI--GLLEP--MK--KSMVPVQVQLDVPVVKVASGNDHLVMLTADGD 192
Query: 249 VYTWGLGSVGQLGHC-SL------QSGDKELLPRRVVALDG------IFIKDVACGGVHS 295
+YT G G GQLG L + G + LL + V L + +D CG +
Sbjct: 193 LYTLGCGEQGQLGRVPELFANRGGRQGLERLLVPKCVMLKSRGSRGHVRFQDAFCGAYFT 252
Query: 296 CALTSKGALYAWGGSQAGQL 315
A++ +G +Y +G S QL
Sbjct: 253 FAISHEGHVYGFGLSNYHQL 272
>GENEDB_PFALCIPARUM|PFE0420c [details] [associations]
symbol:PFE0420c "guanidine nucleotide exchange
factor, putative" species:5833 "Plasmodium falciparum" [GO:0006323
"DNA packaging" evidence=ISS] [GO:0020011 "apicoplast"
evidence=RCA] INTERPRO:IPR000408 Pfam:PF00415 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 GO:GO:0006323 EMBL:AL844504
GenomeReviews:AL844504_GR RefSeq:XP_001351643.1
ProteinModelPortal:Q8I418 EnsemblProtists:PFE0420c:mRNA
GeneID:812857 KEGG:pfa:PFE0420c EuPathDB:PlasmoDB:PF3D7_0508500
HOGENOM:HOG000284105 ProtClustDB:CLSZ2446497 Uniprot:Q8I418
Length = 2606
Score = 157 (60.3 bits), Expect = 2.7e-16, Sum P(4) = 2.7e-16
Identities = 45/143 (31%), Positives = 69/143 (48%)
Query: 168 IICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPEL 227
++ S GS H +A + G + +WGY G+LG G + P++IKG
Sbjct: 440 VVIHCSAGSKHSLACNLHGDIYSWGYGGNGRLGLG-NIKSYNKPQLIKGLRN-------- 490
Query: 228 EKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELL-PRRVVALD-GIFI 285
++I V G HS + N VYTWG G +LGH + D ++ P+ V L+ +
Sbjct: 491 KRILYVCAGTSHSGCIDSNYNVYTWGNGKFYKLGH---GNDDIDIYYPKLVECLNHNKKV 547
Query: 286 KDVACGGVHSCALTSKGALYAWG 308
++ G +S AL KG +Y WG
Sbjct: 548 CMLSFGCFNSLALNVKGDVYVWG 570
Score = 135 (52.6 bits), Expect = 1.7e-14, Sum P(4) = 1.7e-14
Identities = 57/223 (25%), Positives = 94/223 (42%)
Query: 184 ECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAV 243
ECG L WG E G++G G+ + QG ++ ++ KI + S G HS +
Sbjct: 903 ECGDLYIWGNAESGKVGLGV--DYTQGCILLPRKINIIN------KIYKCSLGNSHSLFL 954
Query: 244 SENGEVYTWGLGSVGQLG--HCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSK 301
+ E+Y G + G+LG S + +P +V+ + I+IKD+ G +S L+
Sbjct: 955 TNTNELYVCGSNNNGRLGLFEKSKMVCNIVSVPTKVILHNNIYIKDILAGNTYSIILSVD 1014
Query: 302 GALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYM 361
G +Y +G G G S +I + + I + NG + H
Sbjct: 1015 GFIYIFGEFIKGSNG-NSNNMSCEVI-----SLYNEITNVKYMNGK------YEHVFFLT 1062
Query: 362 RDGRIHGWGYNSYGQAA--NEK-STYAWYPSPVDWCVGEVRKL 401
D ++ G G N Q NEK + Y P + + + E K+
Sbjct: 1063 YDNKLFGIGNNKNCQILCDNEKENNYIKKPKLITYFLKENNKI 1105
Score = 121 (47.7 bits), Expect = 8.7e-15, Sum P(4) = 8.7e-15
Identities = 29/89 (32%), Positives = 46/89 (51%)
Query: 230 ITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVA 289
+ S G HS A + +G++Y+WG G G+LG +++S +K P+ + L I V
Sbjct: 441 VIHCSAGSKHSLACNLHGDIYSWGYGGNGRLGLGNIKSYNK---PQLIKGLRNKRILYVC 497
Query: 290 CGGVHSCALTSKGALYAWGGSQAGQLGLG 318
G HS + S +Y WG + +LG G
Sbjct: 498 AGTSHSGCIDSNYNVYTWGNGKFYKLGHG 526
Score = 110 (43.8 bits), Expect = 1.7e-14, Sum P(4) = 1.7e-14
Identities = 44/159 (27%), Positives = 72/159 (45%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
IY WGY +G+ G G + P QL L N R L + G H+ + S+
Sbjct: 460 IYSWGYGGNGRLGL-GNIKSYNKP-QLIKGL------RNKRILYVCAGTSHSGCIDSNYN 511
Query: 83 LFTWGANEFGQLGDGTEE-GRKHPEKVKQLQ-SEFVKSISCGAHCTAAIAEPRENDGTIS 140
++TWG +F +LG G ++ +P+ V+ L ++ V +S G C ++A + D
Sbjct: 512 VYTWGNGKFYKLGHGNDDIDIYYPKLVECLNHNKKVCMLSFG--CFNSLALNVKGD---- 565
Query: 141 TSRLWVWGQ-NQGSNFPRLFWGAFTPNTIICQVSCGSVH 178
++VWG N +N+ + P I C S+H
Sbjct: 566 ---VYVWGTFNITNNYVNYYISKL-PKQINTNYKCISIH 600
Score = 106 (42.4 bits), Expect = 2.7e-16, Sum P(4) = 2.7e-16
Identities = 18/48 (37%), Positives = 29/48 (60%)
Query: 61 NSRWLDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKV 108
N++ I+CG HT A+ + G L++WG N FG +G+GT + P +
Sbjct: 348 NTKIKFISCGDMHTLAICTGGVLYSWGYNNFGCIGNGTNQNVYEPTPI 395
Score = 106 (42.4 bits), Expect = 2.7e-05, Sum P(2) = 2.7e-05
Identities = 34/110 (30%), Positives = 53/110 (48%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGAN---SRWLDIACGHEHTAAVAS 79
+Y GYN +G+ G G + + K+ FG P N ++ + IACG+ + V+
Sbjct: 773 VYTAGYNKNGELGN-G---EFNLKKK-----FGVPILLNICVNKIIKIACGYNYVLCVSD 823
Query: 80 DGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAI 129
G ++ WG N+ QLG G + P VK L + V +I G +A I
Sbjct: 824 VGLVYGWGKNDKSQLGIGVIKDFYEPVHVKNLTN--VINIFAGYDHSACI 871
Score = 104 (41.7 bits), Expect = 2.1e-10, Sum P(3) = 2.1e-10
Identities = 26/90 (28%), Positives = 44/90 (48%)
Query: 229 KITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDV 288
K+ + ++ S + E+G+VYT G G+LG+ K +P + IK +
Sbjct: 753 KVKIIDGSDHFSVFLLESGKVYTAGYNKNGELGNGEFNLKKKFGVPILLNICVNKIIK-I 811
Query: 289 ACGGVHSCALTSKGALYAWGGSQAGQLGLG 318
ACG + ++ G +Y WG + QLG+G
Sbjct: 812 ACGYNYVLCVSDVGLVYGWGKNDKSQLGIG 841
Score = 101 (40.6 bits), Expect = 8.7e-15, Sum P(4) = 8.7e-15
Identities = 20/49 (40%), Positives = 30/49 (61%)
Query: 166 NTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVI 214
NT I +SCG +H +A+ G+L +WGYN +G +G G T + + P I
Sbjct: 348 NTKIKFISCGDMHTLAICTGGVLYSWGYNNFGCIGNG-TNQNVYEPTPI 395
Score = 101 (40.6 bits), Expect = 2.9e-09, Sum P(4) = 2.9e-09
Identities = 29/128 (22%), Positives = 56/128 (43%)
Query: 68 ACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTA 127
+ G +H+ A G +++WG G+LG G + P+ +K L+++ + + G +
Sbjct: 445 SAGSKHSLACNLHGDIYSWGYGGNGRLGLGNIKSYNKPQLIKGLRNKRILYVCAGTSHSG 504
Query: 128 AIAEPRENDGTISTSRLWVWGQNQGS---NFPRLFWGAFTPNTIICQVSCGSVHVVALSE 184
I + N T + + G +P+L N +C +S G + +AL+
Sbjct: 505 CI-DSNYNVYTWGNGKFYKLGHGNDDIDIYYPKLV-ECLNHNKKVCMLSFGCFNSLALNV 562
Query: 185 CGLLQAWG 192
G + WG
Sbjct: 563 KGDVYVWG 570
Score = 100 (40.3 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 20/67 (29%), Positives = 36/67 (53%)
Query: 329 NESDTYFRNIPILVV-PNG---VQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTY 384
N+ D +F P+ +V P ++ ++CG HTL G ++ WGYN++G N +
Sbjct: 330 NKHD-WFTPFPMKIVFPKKNTKIKFISCGDMHTLAICTGGVLYSWGYNNFGCIGNGTNQN 388
Query: 385 AWYPSPV 391
+ P+P+
Sbjct: 389 VYEPTPI 395
Score = 92 (37.4 bits), Expect = 3.2e-10, Sum P(4) = 3.2e-10
Identities = 29/89 (32%), Positives = 41/89 (46%)
Query: 175 GSVHV-VALSECGLLQAWGYNEYGQLGRG-ITCEGLQGPRVIKGYAKFLDEAPELEKITQ 232
GS H V L E G + GYN+ G+LG G + G ++ + KI +
Sbjct: 759 GSDHFSVFLLESGKVYTAGYNKNGELGNGEFNLKKKFGVPILLNIC--------VNKIIK 810
Query: 233 VSCGEYHSAAVSENGEVYTWGLGSVGQLG 261
++CG + VS+ G VY WG QLG
Sbjct: 811 IACGYNYVLCVSDVGLVYGWGKNDKSQLG 839
Score = 86 (35.3 bits), Expect = 2.7e-16, Sum P(4) = 2.7e-16
Identities = 28/93 (30%), Positives = 47/93 (50%)
Query: 292 GVHSCALTSKGALYAWGGSQAGQLGLGPQ-TRSFSLIPNESDTYFRNIPILVVPNGVQLV 350
GV++ + G LY WG +++G++GLG T+ L+P R I I+ N +
Sbjct: 895 GVNNYSSDECGDLYIWGNAESGKVGLGVDYTQGCILLP-------RKINII---NKIYKC 944
Query: 351 ACGHSHTLVYMRDGRIHGWGYNSYGQAAN-EKS 382
+ G+SH+L ++ G N+ G+ EKS
Sbjct: 945 SLGNSHSLFLTNTNELYVCGSNNNGRLGLFEKS 977
Score = 85 (35.0 bits), Expect = 8.7e-15, Sum P(4) = 8.7e-15
Identities = 25/74 (33%), Positives = 34/74 (45%)
Query: 67 IACGHEHTAAVA---SDGTLFTWGANEFGQLGDGTEEGR-KHPEKVKQLQSEFVKSISCG 122
I+ G +H A VA + ++FTWG N QLG G +P V S V SI C
Sbjct: 22 ISTGLDHYACVAYYKNKPSIFTWGGNSCNQLGLGINNRFVNNPTVVCFFDSFIVASICCT 81
Query: 123 AHCTAAIAEPREND 136
+ T + + ND
Sbjct: 82 NYATFVLVKKNVND 95
Score = 84 (34.6 bits), Expect = 4.2e-16, Sum P(4) = 4.2e-16
Identities = 36/124 (29%), Positives = 54/124 (43%)
Query: 291 GGVH-SCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPIL--VVPNGV 347
G H S L G +Y G ++ G+LG G F+L F +PIL + N +
Sbjct: 759 GSDHFSVFLLESGKVYTAGYNKNGELGNG----EFNLKKK-----F-GVPILLNICVNKI 808
Query: 348 QLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGH 407
+ACG+++ L G ++GWG N Q + P V + V + AG H
Sbjct: 809 IKIACGYNYVLCVSDVGLVYGWGKNDKSQLGIGVIKDFYEPVHVK-NLTNVINIFAGYDH 867
Query: 408 SAVL 411
SA +
Sbjct: 868 SACI 871
Score = 84 (34.6 bits), Expect = 1.7e-14, Sum P(4) = 1.7e-14
Identities = 16/38 (42%), Positives = 26/38 (68%)
Query: 166 NTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGI 203
N II +++CG +V+ +S+ GL+ WG N+ QLG G+
Sbjct: 806 NKII-KIACGYNYVLCVSDVGLVYGWGKNDKSQLGIGV 842
Score = 84 (34.6 bits), Expect = 3.3e-05, Sum P(3) = 3.3e-05
Identities = 15/44 (34%), Positives = 25/44 (56%)
Query: 285 IKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIP 328
IK ++CG +H+ A+ + G LY+WG + G +G G + P
Sbjct: 351 IKFISCGDMHTLAICTGGVLYSWGYNNFGCIGNGTNQNVYEPTP 394
Score = 83 (34.3 bits), Expect = 1.1e-06, Sum P(3) = 1.1e-06
Identities = 14/39 (35%), Positives = 25/39 (64%)
Query: 229 KITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQS 267
KI +SCG+ H+ A+ G +Y+WG + G +G+ + Q+
Sbjct: 350 KIKFISCGDMHTLAICTGGVLYSWGYNNFGCIGNGTNQN 388
Score = 81 (33.6 bits), Expect = 2.5e-08, Sum P(4) = 2.5e-08
Identities = 27/106 (25%), Positives = 49/106 (46%)
Query: 148 GQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEG 207
G + N P+L G N I V G+ H + + WG ++ +LG G
Sbjct: 474 GNIKSYNKPQLIKGL--RNKRILYVCAGTSHSGCIDSNYNVYTWGNGKFYKLGHGNDDID 531
Query: 208 LQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWG 253
+ P++++ L+ +K+ +S G ++S A++ G+VY WG
Sbjct: 532 IYYPKLVE----CLNHN---KKVCMLSFGCFNSLALNVKGDVYVWG 570
Score = 70 (29.7 bits), Expect = 8.7e-15, Sum P(4) = 8.7e-15
Identities = 20/77 (25%), Positives = 42/77 (54%)
Query: 341 LVVPNGVQLVACGHSHTLVYMRD-GRIHGWGYNSYGQAAN-EKSTYAWYPSPV--DWCVG 396
LV+ + V+++ G H V++ + G+++ GYN G+ N E + + P+ + CV
Sbjct: 748 LVLKSKVKIID-GSDHFSVFLLESGKVYTAGYNKNGELGNGEFNLKKKFGVPILLNICVN 806
Query: 397 EVRKLAAGGGHSAVLAD 413
++ K+A G + ++D
Sbjct: 807 KIIKIACGYNYVLCVSD 823
Score = 51 (23.0 bits), Expect = 4.3e-05, Sum P(3) = 4.3e-05
Identities = 9/26 (34%), Positives = 13/26 (50%)
Query: 351 ACGHSHTLVYMRDGRIHGWGYNSYGQ 376
+ G H+L G I+ WGY G+
Sbjct: 445 SAGSKHSLACNLHGDIYSWGYGGNGR 470
Score = 44 (20.5 bits), Expect = 1.7e-14, Sum P(4) = 1.7e-14
Identities = 7/13 (53%), Positives = 9/13 (69%)
Query: 23 IYVWGYNHSGQTG 35
+Y WGYN+ G G
Sbjct: 370 LYSWGYNNFGCIG 382
Score = 40 (19.1 bits), Expect = 2.7e-16, Sum P(4) = 2.7e-16
Identities = 7/16 (43%), Positives = 9/16 (56%)
Query: 20 KSAIYVWGYNHSGQTG 35
K +I+ WG N Q G
Sbjct: 38 KPSIFTWGGNSCNQLG 53
>UNIPROTKB|Q8I418 [details] [associations]
symbol:RCC1 "Guanidine nucleotide exchange factor"
species:36329 "Plasmodium falciparum 3D7" [GO:0006323 "DNA
packaging" evidence=ISS] [GO:0020011 "apicoplast" evidence=RCA]
INTERPRO:IPR000408 Pfam:PF00415 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 GO:GO:0006323 EMBL:AL844504
GenomeReviews:AL844504_GR RefSeq:XP_001351643.1
ProteinModelPortal:Q8I418 EnsemblProtists:PFE0420c:mRNA
GeneID:812857 KEGG:pfa:PFE0420c EuPathDB:PlasmoDB:PF3D7_0508500
HOGENOM:HOG000284105 ProtClustDB:CLSZ2446497 Uniprot:Q8I418
Length = 2606
Score = 157 (60.3 bits), Expect = 2.7e-16, Sum P(4) = 2.7e-16
Identities = 45/143 (31%), Positives = 69/143 (48%)
Query: 168 IICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPEL 227
++ S GS H +A + G + +WGY G+LG G + P++IKG
Sbjct: 440 VVIHCSAGSKHSLACNLHGDIYSWGYGGNGRLGLG-NIKSYNKPQLIKGLRN-------- 490
Query: 228 EKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELL-PRRVVALD-GIFI 285
++I V G HS + N VYTWG G +LGH + D ++ P+ V L+ +
Sbjct: 491 KRILYVCAGTSHSGCIDSNYNVYTWGNGKFYKLGH---GNDDIDIYYPKLVECLNHNKKV 547
Query: 286 KDVACGGVHSCALTSKGALYAWG 308
++ G +S AL KG +Y WG
Sbjct: 548 CMLSFGCFNSLALNVKGDVYVWG 570
Score = 135 (52.6 bits), Expect = 1.7e-14, Sum P(4) = 1.7e-14
Identities = 57/223 (25%), Positives = 94/223 (42%)
Query: 184 ECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAV 243
ECG L WG E G++G G+ + QG ++ ++ KI + S G HS +
Sbjct: 903 ECGDLYIWGNAESGKVGLGV--DYTQGCILLPRKINIIN------KIYKCSLGNSHSLFL 954
Query: 244 SENGEVYTWGLGSVGQLG--HCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSK 301
+ E+Y G + G+LG S + +P +V+ + I+IKD+ G +S L+
Sbjct: 955 TNTNELYVCGSNNNGRLGLFEKSKMVCNIVSVPTKVILHNNIYIKDILAGNTYSIILSVD 1014
Query: 302 GALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYM 361
G +Y +G G G S +I + + I + NG + H
Sbjct: 1015 GFIYIFGEFIKGSNG-NSNNMSCEVI-----SLYNEITNVKYMNGK------YEHVFFLT 1062
Query: 362 RDGRIHGWGYNSYGQAA--NEK-STYAWYPSPVDWCVGEVRKL 401
D ++ G G N Q NEK + Y P + + + E K+
Sbjct: 1063 YDNKLFGIGNNKNCQILCDNEKENNYIKKPKLITYFLKENNKI 1105
Score = 121 (47.7 bits), Expect = 8.7e-15, Sum P(4) = 8.7e-15
Identities = 29/89 (32%), Positives = 46/89 (51%)
Query: 230 ITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVA 289
+ S G HS A + +G++Y+WG G G+LG +++S +K P+ + L I V
Sbjct: 441 VIHCSAGSKHSLACNLHGDIYSWGYGGNGRLGLGNIKSYNK---PQLIKGLRNKRILYVC 497
Query: 290 CGGVHSCALTSKGALYAWGGSQAGQLGLG 318
G HS + S +Y WG + +LG G
Sbjct: 498 AGTSHSGCIDSNYNVYTWGNGKFYKLGHG 526
Score = 110 (43.8 bits), Expect = 1.7e-14, Sum P(4) = 1.7e-14
Identities = 44/159 (27%), Positives = 72/159 (45%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
IY WGY +G+ G G + P QL L N R L + G H+ + S+
Sbjct: 460 IYSWGYGGNGRLGL-GNIKSYNKP-QLIKGL------RNKRILYVCAGTSHSGCIDSNYN 511
Query: 83 LFTWGANEFGQLGDGTEE-GRKHPEKVKQLQ-SEFVKSISCGAHCTAAIAEPRENDGTIS 140
++TWG +F +LG G ++ +P+ V+ L ++ V +S G C ++A + D
Sbjct: 512 VYTWGNGKFYKLGHGNDDIDIYYPKLVECLNHNKKVCMLSFG--CFNSLALNVKGD---- 565
Query: 141 TSRLWVWGQ-NQGSNFPRLFWGAFTPNTIICQVSCGSVH 178
++VWG N +N+ + P I C S+H
Sbjct: 566 ---VYVWGTFNITNNYVNYYISKL-PKQINTNYKCISIH 600
Score = 106 (42.4 bits), Expect = 2.7e-16, Sum P(4) = 2.7e-16
Identities = 18/48 (37%), Positives = 29/48 (60%)
Query: 61 NSRWLDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKV 108
N++ I+CG HT A+ + G L++WG N FG +G+GT + P +
Sbjct: 348 NTKIKFISCGDMHTLAICTGGVLYSWGYNNFGCIGNGTNQNVYEPTPI 395
Score = 106 (42.4 bits), Expect = 2.7e-05, Sum P(2) = 2.7e-05
Identities = 34/110 (30%), Positives = 53/110 (48%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGAN---SRWLDIACGHEHTAAVAS 79
+Y GYN +G+ G G + + K+ FG P N ++ + IACG+ + V+
Sbjct: 773 VYTAGYNKNGELGN-G---EFNLKKK-----FGVPILLNICVNKIIKIACGYNYVLCVSD 823
Query: 80 DGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAI 129
G ++ WG N+ QLG G + P VK L + V +I G +A I
Sbjct: 824 VGLVYGWGKNDKSQLGIGVIKDFYEPVHVKNLTN--VINIFAGYDHSACI 871
Score = 104 (41.7 bits), Expect = 2.1e-10, Sum P(3) = 2.1e-10
Identities = 26/90 (28%), Positives = 44/90 (48%)
Query: 229 KITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDV 288
K+ + ++ S + E+G+VYT G G+LG+ K +P + IK +
Sbjct: 753 KVKIIDGSDHFSVFLLESGKVYTAGYNKNGELGNGEFNLKKKFGVPILLNICVNKIIK-I 811
Query: 289 ACGGVHSCALTSKGALYAWGGSQAGQLGLG 318
ACG + ++ G +Y WG + QLG+G
Sbjct: 812 ACGYNYVLCVSDVGLVYGWGKNDKSQLGIG 841
Score = 101 (40.6 bits), Expect = 8.7e-15, Sum P(4) = 8.7e-15
Identities = 20/49 (40%), Positives = 30/49 (61%)
Query: 166 NTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVI 214
NT I +SCG +H +A+ G+L +WGYN +G +G G T + + P I
Sbjct: 348 NTKIKFISCGDMHTLAICTGGVLYSWGYNNFGCIGNG-TNQNVYEPTPI 395
Score = 101 (40.6 bits), Expect = 2.9e-09, Sum P(4) = 2.9e-09
Identities = 29/128 (22%), Positives = 56/128 (43%)
Query: 68 ACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTA 127
+ G +H+ A G +++WG G+LG G + P+ +K L+++ + + G +
Sbjct: 445 SAGSKHSLACNLHGDIYSWGYGGNGRLGLGNIKSYNKPQLIKGLRNKRILYVCAGTSHSG 504
Query: 128 AIAEPRENDGTISTSRLWVWGQNQGS---NFPRLFWGAFTPNTIICQVSCGSVHVVALSE 184
I + N T + + G +P+L N +C +S G + +AL+
Sbjct: 505 CI-DSNYNVYTWGNGKFYKLGHGNDDIDIYYPKLV-ECLNHNKKVCMLSFGCFNSLALNV 562
Query: 185 CGLLQAWG 192
G + WG
Sbjct: 563 KGDVYVWG 570
Score = 100 (40.3 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 20/67 (29%), Positives = 36/67 (53%)
Query: 329 NESDTYFRNIPILVV-PNG---VQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTY 384
N+ D +F P+ +V P ++ ++CG HTL G ++ WGYN++G N +
Sbjct: 330 NKHD-WFTPFPMKIVFPKKNTKIKFISCGDMHTLAICTGGVLYSWGYNNFGCIGNGTNQN 388
Query: 385 AWYPSPV 391
+ P+P+
Sbjct: 389 VYEPTPI 395
Score = 92 (37.4 bits), Expect = 3.2e-10, Sum P(4) = 3.2e-10
Identities = 29/89 (32%), Positives = 41/89 (46%)
Query: 175 GSVHV-VALSECGLLQAWGYNEYGQLGRG-ITCEGLQGPRVIKGYAKFLDEAPELEKITQ 232
GS H V L E G + GYN+ G+LG G + G ++ + KI +
Sbjct: 759 GSDHFSVFLLESGKVYTAGYNKNGELGNGEFNLKKKFGVPILLNIC--------VNKIIK 810
Query: 233 VSCGEYHSAAVSENGEVYTWGLGSVGQLG 261
++CG + VS+ G VY WG QLG
Sbjct: 811 IACGYNYVLCVSDVGLVYGWGKNDKSQLG 839
Score = 86 (35.3 bits), Expect = 2.7e-16, Sum P(4) = 2.7e-16
Identities = 28/93 (30%), Positives = 47/93 (50%)
Query: 292 GVHSCALTSKGALYAWGGSQAGQLGLGPQ-TRSFSLIPNESDTYFRNIPILVVPNGVQLV 350
GV++ + G LY WG +++G++GLG T+ L+P R I I+ N +
Sbjct: 895 GVNNYSSDECGDLYIWGNAESGKVGLGVDYTQGCILLP-------RKINII---NKIYKC 944
Query: 351 ACGHSHTLVYMRDGRIHGWGYNSYGQAAN-EKS 382
+ G+SH+L ++ G N+ G+ EKS
Sbjct: 945 SLGNSHSLFLTNTNELYVCGSNNNGRLGLFEKS 977
Score = 85 (35.0 bits), Expect = 8.7e-15, Sum P(4) = 8.7e-15
Identities = 25/74 (33%), Positives = 34/74 (45%)
Query: 67 IACGHEHTAAVA---SDGTLFTWGANEFGQLGDGTEEGR-KHPEKVKQLQSEFVKSISCG 122
I+ G +H A VA + ++FTWG N QLG G +P V S V SI C
Sbjct: 22 ISTGLDHYACVAYYKNKPSIFTWGGNSCNQLGLGINNRFVNNPTVVCFFDSFIVASICCT 81
Query: 123 AHCTAAIAEPREND 136
+ T + + ND
Sbjct: 82 NYATFVLVKKNVND 95
Score = 84 (34.6 bits), Expect = 4.2e-16, Sum P(4) = 4.2e-16
Identities = 36/124 (29%), Positives = 54/124 (43%)
Query: 291 GGVH-SCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPIL--VVPNGV 347
G H S L G +Y G ++ G+LG G F+L F +PIL + N +
Sbjct: 759 GSDHFSVFLLESGKVYTAGYNKNGELGNG----EFNLKKK-----F-GVPILLNICVNKI 808
Query: 348 QLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGH 407
+ACG+++ L G ++GWG N Q + P V + V + AG H
Sbjct: 809 IKIACGYNYVLCVSDVGLVYGWGKNDKSQLGIGVIKDFYEPVHVK-NLTNVINIFAGYDH 867
Query: 408 SAVL 411
SA +
Sbjct: 868 SACI 871
Score = 84 (34.6 bits), Expect = 1.7e-14, Sum P(4) = 1.7e-14
Identities = 16/38 (42%), Positives = 26/38 (68%)
Query: 166 NTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGI 203
N II +++CG +V+ +S+ GL+ WG N+ QLG G+
Sbjct: 806 NKII-KIACGYNYVLCVSDVGLVYGWGKNDKSQLGIGV 842
Score = 84 (34.6 bits), Expect = 3.3e-05, Sum P(3) = 3.3e-05
Identities = 15/44 (34%), Positives = 25/44 (56%)
Query: 285 IKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIP 328
IK ++CG +H+ A+ + G LY+WG + G +G G + P
Sbjct: 351 IKFISCGDMHTLAICTGGVLYSWGYNNFGCIGNGTNQNVYEPTP 394
Score = 83 (34.3 bits), Expect = 1.1e-06, Sum P(3) = 1.1e-06
Identities = 14/39 (35%), Positives = 25/39 (64%)
Query: 229 KITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQS 267
KI +SCG+ H+ A+ G +Y+WG + G +G+ + Q+
Sbjct: 350 KIKFISCGDMHTLAICTGGVLYSWGYNNFGCIGNGTNQN 388
Score = 81 (33.6 bits), Expect = 2.5e-08, Sum P(4) = 2.5e-08
Identities = 27/106 (25%), Positives = 49/106 (46%)
Query: 148 GQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEG 207
G + N P+L G N I V G+ H + + WG ++ +LG G
Sbjct: 474 GNIKSYNKPQLIKGL--RNKRILYVCAGTSHSGCIDSNYNVYTWGNGKFYKLGHGNDDID 531
Query: 208 LQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWG 253
+ P++++ L+ +K+ +S G ++S A++ G+VY WG
Sbjct: 532 IYYPKLVE----CLNHN---KKVCMLSFGCFNSLALNVKGDVYVWG 570
Score = 70 (29.7 bits), Expect = 8.7e-15, Sum P(4) = 8.7e-15
Identities = 20/77 (25%), Positives = 42/77 (54%)
Query: 341 LVVPNGVQLVACGHSHTLVYMRD-GRIHGWGYNSYGQAAN-EKSTYAWYPSPV--DWCVG 396
LV+ + V+++ G H V++ + G+++ GYN G+ N E + + P+ + CV
Sbjct: 748 LVLKSKVKIID-GSDHFSVFLLESGKVYTAGYNKNGELGNGEFNLKKKFGVPILLNICVN 806
Query: 397 EVRKLAAGGGHSAVLAD 413
++ K+A G + ++D
Sbjct: 807 KIIKIACGYNYVLCVSD 823
Score = 51 (23.0 bits), Expect = 4.3e-05, Sum P(3) = 4.3e-05
Identities = 9/26 (34%), Positives = 13/26 (50%)
Query: 351 ACGHSHTLVYMRDGRIHGWGYNSYGQ 376
+ G H+L G I+ WGY G+
Sbjct: 445 SAGSKHSLACNLHGDIYSWGYGGNGR 470
Score = 44 (20.5 bits), Expect = 1.7e-14, Sum P(4) = 1.7e-14
Identities = 7/13 (53%), Positives = 9/13 (69%)
Query: 23 IYVWGYNHSGQTG 35
+Y WGYN+ G G
Sbjct: 370 LYSWGYNNFGCIG 382
Score = 40 (19.1 bits), Expect = 2.7e-16, Sum P(4) = 2.7e-16
Identities = 7/16 (43%), Positives = 9/16 (56%)
Query: 20 KSAIYVWGYNHSGQTG 35
K +I+ WG N Q G
Sbjct: 38 KPSIFTWGGNSCNQLG 53
>UNIPROTKB|E2QZC2 [details] [associations]
symbol:NEK8 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004674 "protein serine/threonine kinase activity"
evidence=IEA] InterPro:IPR000719 InterPro:IPR002290
InterPro:IPR008271 InterPro:IPR011009 InterPro:IPR017441
Pfam:PF00069 PROSITE:PS00107 PROSITE:PS00108 PROSITE:PS50011
SMART:SM00220 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005524
SUPFAM:SSF56112 GO:GO:0004674 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS50012
Ensembl:ENSCAFT00000029828 Uniprot:E2QZC2
Length = 701
Score = 232 (86.7 bits), Expect = 3.6e-16, P = 3.6e-16
Identities = 86/303 (28%), Positives = 134/303 (44%)
Query: 67 IACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCT 126
+ACG TA + G + T+G+ G LG G+ P V+ L + ++CGA
Sbjct: 405 VACGDLFTACLTDRGIIMTFGSGSNGCLGHGSLNDISQPTIVEALLGYEMVQVACGASHV 464
Query: 127 AAIAEPREND--GTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSE 184
A++ RE G RL + G + + P+ + P +V CG + L+
Sbjct: 465 LALSTERELFAWGRGDGGRLGL-GTRESHSCPQQV--SMPPGQEAQRVVCGIDSSMILTV 521
Query: 185 CGLLQAWGYNEYGQLGRGITCEGLQ-GP-RVIKGYAKF--LDEAP-ELEKITQVSCGEYH 239
G A G N + +LG G + P + ++ F L AP + E + V G H
Sbjct: 522 PGRALACGSNRFNKLGLDRLSLGEEPAPNQQVEEALSFTPLGSAPFDREPLLSVDLGTAH 581
Query: 240 SAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALT 299
SAAV+ +G+ YT+G GQLG + P +V L I I VACG + A+
Sbjct: 582 SAAVTASGDCYTFGSNQHGQLG---TNARRVSRAPCQVQGLQNIKIAMVACGDAFTVAVG 638
Query: 300 SKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLV 359
++G +Y+WG G+LG + P + D + P V V+C H +TL+
Sbjct: 639 AEGEVYSWGKGARGRLGRRDEDAGLPR-PVQLDE--------IHPYTVTSVSCCHGNTLL 689
Query: 360 YMR 362
+R
Sbjct: 690 AVR 692
Score = 207 (77.9 bits), Expect = 2.1e-13, P = 2.1e-13
Identities = 67/227 (29%), Positives = 102/227 (44%)
Query: 166 NTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAP 225
NT + QV+ G ++ G L W G G G G + + ++FL E
Sbjct: 340 NTEVVQVAAGRTQKAGVTRSGRLILWEAPPLGA-GGGALLPGAVEQQQPQFVSRFL-EGQ 397
Query: 226 ELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFI 285
I V+CG+ +A +++ G + T+G GS G LGH SL + P V AL G +
Sbjct: 398 SGVTIKHVACGDLFTACLTDRGIIMTFGSGSNGCLGHGSLNDISQ---PTIVEALLGYEM 454
Query: 286 KDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPN 345
VACG H AL+++ L+AWG G+LGLG TR P + + +P
Sbjct: 455 VQVACGASHVLALSTERELFAWGRGDGGRLGLG--TRESHSCPQQ----------VSMPP 502
Query: 346 G--VQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSP 390
G Q V CG +++ GR G N + + ++ + P+P
Sbjct: 503 GQEAQRVVCGIDSSMILTVPGRALACGSNRFNKLGLDRLSLGEEPAP 549
Score = 203 (76.5 bits), Expect = 5.8e-13, P = 5.8e-13
Identities = 67/243 (27%), Positives = 105/243 (43%)
Query: 65 LDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAH 124
+ +ACG H A++++ LF WG + G+LG GT E P++V + + + CG
Sbjct: 455 VQVACGASHVLALSTERELFAWGRGDGGRLGLGTRESHSCPQQVSMPPGQEAQRVVCGID 514
Query: 125 CTAAIAEP-------RENDGTISTSRLWVWGQNQGSNFPRLFWGAFTP-------NTIIC 170
+ + P + RL + G+ N +FTP +
Sbjct: 515 SSMILTVPGRALACGSNRFNKLGLDRLSL-GEEPAPNQQVEEALSFTPLGSAPFDREPLL 573
Query: 171 QVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKI 230
V G+ H A++ G +G N++GQLG + P ++G KI
Sbjct: 574 SVDLGTAHSAAVTASGDCYTFGSNQHGQLGTNARRVS-RAPCQVQGLQNI--------KI 624
Query: 231 TQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIF---IKD 287
V+CG+ + AV GEVY+WG G+ G+LG +G LPR V LD I +
Sbjct: 625 AMVACGDAFTVAVGAEGEVYSWGKGARGRLGRRDEDAG----LPRPV-QLDEIHPYTVTS 679
Query: 288 VAC 290
V+C
Sbjct: 680 VSC 682
Score = 168 (64.2 bits), Expect = 4.1e-09, P = 4.1e-09
Identities = 54/212 (25%), Positives = 92/212 (43%)
Query: 169 ICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELE 228
I V+CG + L++ G++ +G G LG G + + P +++ +
Sbjct: 402 IKHVACGDLFTACLTDRGIIMTFGSGSNGCLGHG-SLNDISQPTIVEALLGY-------- 452
Query: 229 KITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDV 288
++ QV+CG H A+S E++ WG G G+LG L + + P++V G + V
Sbjct: 453 EMVQVACGASHVLALSTERELFAWGRGDGGRLG---LGTRESHSCPQQVSMPPGQEAQRV 509
Query: 289 ACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNES-DTYFRNIPILVVP--- 344
CG S LT G A G ++ +LGL + PN+ + P+ P
Sbjct: 510 VCGIDSSMILTVPGRALACGSNRFNKLGLDRLSLGEEPAPNQQVEEALSFTPLGSAPFDR 569
Query: 345 NGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQ 376
+ V G +H+ G + +G N +GQ
Sbjct: 570 EPLLSVDLGTAHSAAVTASGDCYTFGSNQHGQ 601
>UNIPROTKB|H0YEL8 [details] [associations]
symbol:SERGEF "Secretion-regulating guanine nucleotide
exchange factor" species:9606 "Homo sapiens" [GO:0050709 "negative
regulation of protein secretion" evidence=IEA] InterPro:IPR027048
INTERPRO:IPR000408 Pfam:PF00415 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 PANTHER:PTHR22870:SF7 HGNC:HGNC:17499 EMBL:AC055860
EMBL:AC124058 EMBL:AC124078 Ensembl:ENST00000529151 Uniprot:H0YEL8
Length = 299
Score = 215 (80.7 bits), Expect = 4.7e-16, P = 4.7e-16
Identities = 76/287 (26%), Positives = 117/287 (40%)
Query: 168 IICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPEL 227
++C ++ G H VA + G++ WG GR + C G P E
Sbjct: 19 VVC-IAAGLRHAVAATASGIVFQWGTG-LASCGRRL-CPGQTLPLFFTAKEPSRVTGLEN 75
Query: 228 EKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVA--LDGIFI 285
K V G HSA++++ GEVY WG GQL + ++ + P+++ A +
Sbjct: 76 SKAMCVLAGSDHSASLTDAGEVYVWGSNKHGQLAN---EAAFLPV-PQKIEAHCFQNEKV 131
Query: 286 KDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQT-RSFSLIPNESDTYFR-NIPILVV 343
+ G H A T G ++ WG + GQLG +T + L + D++ + P +
Sbjct: 132 TAIWSGWTHLVAQTETGKMFTWGRADYGQLGRKLETYEGWKL--EKQDSFLPCSRPPNSM 189
Query: 344 PN------GVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE 397
P+ G V+CG H L + G + WG+N +G + W P PV +
Sbjct: 190 PSSPHCLTGATEVSCGSEHNLAII-GGVCYSWGWNEHGMCGDGTEANVWAPKPVQALLSS 248
Query: 398 VRKLAA-GGGHSAVLADACSLKELCEFRLAESVTLSNASEIEDVASR 443
L G GHS L C L VT + IED S+
Sbjct: 249 SGLLVGCGAGHSLAL---CQLPAHPALVQDPKVTYLSPDAIEDTESQ 292
Score = 159 (61.0 bits), Expect = 6.8e-09, P = 6.8e-09
Identities = 70/258 (27%), Positives = 102/258 (39%)
Query: 67 IACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGR--------KHPEKVKQLQSEFVKS 118
IA G H A + G +F WG G G+ K P +V L++
Sbjct: 22 IAAGLRHAVAATASGIVFQWGTG-LASCGRRLCPGQTLPLFFTAKEPSRVTGLENSKAMC 80
Query: 119 ISCGAHCTAAIAEPRENDGTISTSRLWVWGQNQGSNFPRLFWGAFTP-----------NT 167
+ G+ +A++ + E ++VWG N+ AF P N
Sbjct: 81 VLAGSDHSASLTDAGE---------VYVWGSNKHGQLANE--AAFLPVPQKIEAHCFQNE 129
Query: 168 IICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGI-TCEG--LQGPRVIKGYAKFLDEA 224
+ + G H+VA +E G + WG +YGQLGR + T EG L+ ++ +
Sbjct: 130 KVTAIWSGWTHLVAQTETGKMFTWGRADYGQLGRKLETYEGWKLEKQDSFLPCSRPPNSM 189
Query: 225 PE----LEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVAL 280
P L T+VSCG H+ A+ G Y+WG G C + P+ V AL
Sbjct: 190 PSSPHCLTGATEVSCGSEHNLAII-GGVCYSWGWNEHGM---CGDGTEANVWAPKPVQAL 245
Query: 281 DGIFIKDVACGGVHSCAL 298
V CG HS AL
Sbjct: 246 LSSSGLLVGCGAGHSLAL 263
Score = 158 (60.7 bits), Expect = 8.8e-09, P = 8.8e-09
Identities = 48/168 (28%), Positives = 74/168 (44%)
Query: 228 EKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGH--CSLQS-----GDKELLPRRVVAL 280
EK+ ++ G H+ A + +G V+ WG G + G C Q+ KE P RV L
Sbjct: 17 EKVVCIAAGLRHAVAATASGIVFQWGTG-LASCGRRLCPGQTLPLFFTAKE--PSRVTGL 73
Query: 281 DGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTY-FRNIP 339
+ V G HS +LT G +Y WG ++ GQL +F +P + + + F+N
Sbjct: 74 ENSKAMCVLAGSDHSASLTDAGEVYVWGSNKHGQLA---NEAAFLPVPQKIEAHCFQN-- 128
Query: 340 ILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTY-AW 386
V + G +H + G++ WG YGQ + TY W
Sbjct: 129 -----EKVTAIWSGWTHLVAQTETGKMFTWGRADYGQLGRKLETYEGW 171
Score = 134 (52.2 bits), Expect = 4.8e-06, P = 4.8e-06
Identities = 37/117 (31%), Positives = 54/117 (46%)
Query: 23 IYVWGYNHSGQTGRK-----G--RERQLR-IPKQLPPELFGCPAGANSRWLDIACGHEHT 74
++ WG GQ GRK G E+Q +P PP + +++CG EH
Sbjct: 150 MFTWGRADYGQLGRKLETYEGWKLEKQDSFLPCSRPPNSMPSSPHCLTGATEVSCGSEHN 209
Query: 75 AAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAE 131
A+ G ++WG NE G GDGTE P+ V+ L S + CGA + A+ +
Sbjct: 210 LAIIG-GVCYSWGWNEHGMCGDGTEANVWAPKPVQALLSSSGLLVGCGAGHSLALCQ 265
>TAIR|locus:2090136 [details] [associations]
symbol:AT3G15430 "AT3G15430" species:3702 "Arabidopsis
thaliana" [GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] [GO:0008536 "Ran GTPase binding"
evidence=ISS] [GO:0006486 "protein glycosylation" evidence=RCA]
INTERPRO:IPR000408 Pfam:PF00415 EMBL:CP002686 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 EMBL:AB022218 EMBL:AC024081 HSSP:P18754
EMBL:AY150379 IPI:IPI00535822 RefSeq:NP_566512.1 RefSeq:NP_974323.1
UniGene:At.24353 ProteinModelPortal:Q9LDU3 SMR:Q9LDU3 IntAct:Q9LDU3
EnsemblPlants:AT3G15430.1 EnsemblPlants:AT3G15430.2 GeneID:820782
KEGG:ath:AT3G15430 TAIR:At3g15430 InParanoid:Q9LDU3 OMA:GDNERAQ
PhylomeDB:Q9LDU3 ProtClustDB:CLSN2688406 Genevestigator:Q9LDU3
Uniprot:Q9LDU3
Length = 488
Score = 227 (85.0 bits), Expect = 5.9e-16, P = 5.9e-16
Identities = 86/318 (27%), Positives = 138/318 (43%)
Query: 67 IACGHEHTAAVASDGTLFTWGANEFGQLGD-GTEEGRKHPEKVKQLQSEFVKSISCGAHC 125
++ H+A V G + T G N G T P+ V+ L+ K ++ G H
Sbjct: 168 VSATQNHSAFVLQSGQVLTCGDNSSHCCGHLDTSRPIFRPKLVEALKGTPCKQVAAGLHF 227
Query: 126 TAAIAEPRE--NDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALS 183
T ++ G+ + +L G P++ T ++ Q++ G +V+A++
Sbjct: 228 TVFLSREGHAYTCGSNTHGQLG-HGDTLDRPVPKVVEFLKTIGPVV-QIAAGPSYVLAVT 285
Query: 184 ECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAV 243
+ G + ++G LG G + LQ PRVI+ + + + I +VS G+ H+ A+
Sbjct: 286 QDGSVYSFGSGSNFCLGHGEQQDELQ-PRVIQAFKR------KGIHILRVSAGDEHAVAL 338
Query: 244 SENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGA 303
NG VYTWG G G LGH DK + P+ +V L+ V + L G
Sbjct: 339 DSNGRVYTWGKGYCGALGHGD--ENDK-ITPQVLVNLNNCLAVQVCARKRKTFVLVEGGL 395
Query: 304 LYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFR-NIPILVVPNGVQLVACGHSHTLVYMR 362
LY +G G LG P SD R + + P+ V V+ G HT+V +
Sbjct: 396 LYGFGWMGFGSLGF-PDR-------GVSDKVLRPRVLECLKPHRVSQVSTGLYHTIVVTQ 447
Query: 363 DGRIHGWGYNSYGQAANE 380
GRI G+G N Q ++
Sbjct: 448 RGRIFGFGDNERAQLGHD 465
Score = 166 (63.5 bits), Expect = 3.7e-09, P = 3.7e-09
Identities = 68/254 (26%), Positives = 117/254 (46%)
Query: 24 YVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGTL 83
Y G N GQ G G +PK + F G + IA G + AV DG++
Sbjct: 238 YTCGSNTHGQLGH-GDTLDRPVPKVVE---FLKTIGPV---VQIAAGPSYVLAVTQDGSV 290
Query: 84 FTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTSR 143
+++G+ LG G ++ P ++ + + + + A A+A +++G R
Sbjct: 291 YSFGSGSNFCLGHGEQQDELQPRVIQAFKRKGIHILRVSAGDEHAVA--LDSNG-----R 343
Query: 144 LWVWGQNQ-GSNFPRLFWGAFTPNTIICQVSCGSVHVVA-------LSECGLLQAWGYNE 195
++ WG+ G+ TP ++ +C +V V A L E GLL +G+
Sbjct: 344 VYTWGKGYCGALGHGDENDKITPQVLVNLNNCLAVQVCARKRKTFVLVEGGLLYGFGWMG 403
Query: 196 YGQLG---RGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTW 252
+G LG RG++ + L+ PRV+ E + +++QVS G YH+ V++ G ++ +
Sbjct: 404 FGSLGFPDRGVSDKVLR-PRVL--------ECLKPHRVSQVSTGLYHTIVVTQRGRIFGF 454
Query: 253 GLGSVGQLGHCSLQ 266
G QLGH SL+
Sbjct: 455 GDNERAQLGHDSLR 468
Score = 131 (51.2 bits), Expect = 2.7e-05, P = 2.7e-05
Identities = 49/152 (32%), Positives = 72/152 (47%)
Query: 223 EAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDG 282
E P ++ QVS + HSA V ++G+V T G S GH L + P+ V AL G
Sbjct: 158 EFPFPAQVAQVSATQNHSAFVLQSGQVLTCGDNSSHCCGH--LDTSRPIFRPKLVEALKG 215
Query: 283 IFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNI-PIL 341
K VA G + L+ +G Y G + GQLG G T +P + + + I P+
Sbjct: 216 TPCKQVAAGLHFTVFLSREGHAYTCGSNTHGQLGHG-DTLDRP-VPKVVE-FLKTIGPV- 271
Query: 342 VVPNGVQLVACGHSHTLVYMRDGRIHGWGYNS 373
VQ +A G S+ L +DG ++ +G S
Sbjct: 272 -----VQ-IAAGPSYVLAVTQDGSVYSFGSGS 297
>UNIPROTKB|E1BX75 [details] [associations]
symbol:ALS2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005543 "phospholipid binding" evidence=IEA]
[GO:0001662 "behavioral fear response" evidence=IEA] [GO:0001726
"ruffle" evidence=IEA] [GO:0001881 "receptor recycling"
evidence=IEA] [GO:0005769 "early endosome" evidence=IEA]
[GO:0005813 "centrosome" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0006979 "response to oxidative stress"
evidence=IEA] [GO:0007528 "neuromuscular junction development"
evidence=IEA] [GO:0007626 "locomotory behavior" evidence=IEA]
[GO:0008104 "protein localization" evidence=IEA] [GO:0014069
"postsynaptic density" evidence=IEA] [GO:0016050 "vesicle
organization" evidence=IEA] [GO:0016197 "endosomal transport"
evidence=IEA] [GO:0017112 "Rab guanyl-nucleotide exchange factor
activity" evidence=IEA] [GO:0017137 "Rab GTPase binding"
evidence=IEA] [GO:0030027 "lamellipodium" evidence=IEA] [GO:0030676
"Rac guanyl-nucleotide exchange factor activity" evidence=IEA]
[GO:0031982 "vesicle" evidence=IEA] [GO:0032313 "regulation of Rab
GTPase activity" evidence=IEA] [GO:0032855 "positive regulation of
Rac GTPase activity" evidence=IEA] [GO:0035249 "synaptic
transmission, glutamatergic" evidence=IEA] [GO:0042803 "protein
homodimerization activity" evidence=IEA] [GO:0043234 "protein
complex" evidence=IEA] [GO:0043539 "protein serine/threonine kinase
activator activity" evidence=IEA] [GO:0048812 "neuron projection
morphogenesis" evidence=IEA] [GO:0051036 "regulation of endosome
size" evidence=IEA] InterPro:IPR000219 InterPro:IPR001849
Pfam:PF00621 PROSITE:PS50003 PROSITE:PS50010 SMART:SM00233
INTERPRO:IPR000408 Pfam:PF00415 Pfam:PF02204 GO:GO:0005829
GO:GO:0005813 GO:GO:0043234 GO:GO:0014069 GO:GO:0008104
GO:GO:0006979 GO:GO:0005543 Gene3D:2.30.29.30 InterPro:IPR011993
GO:GO:0043539 GO:GO:0016197 Gene3D:1.20.900.10 SUPFAM:SSF48065
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
InterPro:IPR003409 InterPro:IPR003123 Pfam:PF02493 SMART:SM00698
PROSITE:PS51205 GeneTree:ENSGT00600000084242 OMA:AKPAIDF
GO:GO:0005769 GO:GO:0017112 GO:GO:0030676 GO:GO:0032855
GO:GO:0001881 GO:GO:0051036 GO:GO:0032313 GO:GO:0016050
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 EMBL:AADN02019863
IPI:IPI00580588 Ensembl:ENSGALT00000013707 Uniprot:E1BX75
Length = 1651
Score = 163 (62.4 bits), Expect = 7.1e-16, Sum P(2) = 7.1e-16
Identities = 68/213 (31%), Positives = 97/213 (45%)
Query: 211 PRVIK--GYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSG 268
PR+++ G AK A +T GE + S EV++WG G GQLGH G
Sbjct: 488 PRLLRKVGRAKMRTVA-----LTPTYSGEADALLPSLRTEVWSWGRGKDGQLGH-----G 537
Query: 269 D--KELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSL 326
D L P V +LDG + ++ GG HS ALT+K +Y+WG + GQLG T S +
Sbjct: 538 DVLPRLQPLCVKSLDGKEVIQLSAGGHHSLALTAKSQVYSWGSNIFGQLG---HTNSPTT 594
Query: 327 IPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQ--AANEKSTY 384
+P + V +GV A G ++L ++ D G GQ A + S
Sbjct: 595 VPRLAK---------VCGDGVWSTAAGSDYSL-FLADEEDFQPGLYYCGQETATDNLSEN 644
Query: 385 AWYPSPVDW--C--VGEVRKLAAGGGHSAVLAD 413
+PV C +G + + AGG + VL D
Sbjct: 645 NCSKNPVLLLSCSKIGYISNVIAGGDNCLVLVD 677
Score = 154 (59.3 bits), Expect = 4.1e-07, P = 4.1e-07
Identities = 59/201 (29%), Positives = 90/201 (44%)
Query: 230 ITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVV---ALDGIFIK 286
+ Q + G H ++E GEVY S G+L +SG +E + L G +
Sbjct: 43 VLQAALGTNHGLLLTEGGEVY-----SFGKL---PWRSGPEEFCANSPILENTLLGQHVI 94
Query: 287 DVACGGVHSCALTSKGALYAWGGSQAGQLGLG-----PQTRSFSLIPNESDTYFRNIPIL 341
VA G H+ A+T G +Y WG + +GQ + P+ + S+ ++S+T P+L
Sbjct: 95 TVAAGSFHNGAVTEGGVVYMWGNNSSGQCAVANQPYVPEPQPISI--SDSETS----PLL 148
Query: 342 VVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTY-AWYPSPVDWCVGEV-R 399
V +QL ACG HTL I WG S Q +T+ P V+ G V
Sbjct: 149 SV-RVLQL-ACGEEHTLALSLSREIWAWG--SGCQLGLITTTFPVTKPQKVEHLAGRVVL 204
Query: 400 KLAAGGGHSAVLADACSLKEL 420
++A G HS L ++E+
Sbjct: 205 QIACGAYHSLALVQCLPVQEM 225
Score = 142 (55.0 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 66/220 (30%), Positives = 100/220 (45%)
Query: 88 ANEFG-QLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTSRLWV 146
ANE G Q G G+ G PE +K + E VK S ++++ + RE + + RL +
Sbjct: 424 ANEPGPQPGSGST-G---PEALKDSREEQVKLESMQGKKSSSLVDIREEESEGGSRRLSL 479
Query: 147 WGQ-NQGSNFPRLFW--GAFTPNTI-ICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRG 202
G +Q S PRL G T+ + G + S + +WG + GQLG G
Sbjct: 480 PGLLSQVS--PRLLRKVGRAKMRTVALTPTYSGEADALLPSLRTEVWSWGRGKDGQLGHG 537
Query: 203 ITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGH 262
LQ P +K LD +++ Q+S G +HS A++ +VY+WG GQLGH
Sbjct: 538 DVLPRLQ-PLCVKS----LDG----KEVIQLSAGGHHSLALTAKSQVYSWGSNIFGQLGH 588
Query: 263 CSLQSGDKELLPRRV-VALDGIFIKDVACGGVHSCALTSK 301
+ +PR V DG++ A G +S L +
Sbjct: 589 ----TNSPTTVPRLAKVCGDGVW--STAAGSDYSLFLADE 622
Score = 125 (49.1 bits), Expect = 7.1e-16, Sum P(2) = 7.1e-16
Identities = 35/112 (31%), Positives = 54/112 (48%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGA--NSRWLDIACGHEHTAAVASD 80
+Y+WG N SGQ Q +P+ P + + R L +ACG EHT A++
Sbjct: 112 VYMWGNNSSGQCAVAN---QPYVPEPQPISISDSETSPLLSVRVLQLACGEEHTLALSLS 168
Query: 81 GTLFTWGANEFGQLG-DGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAE 131
++ WG+ QLG T P+KV+ L V I+CGA+ + A+ +
Sbjct: 169 REIWAWGSG--CQLGLITTTFPVTKPQKVEHLAGRVVLQIACGAYHSLALVQ 218
Score = 107 (42.7 bits), Expect = 5.2e-14, Sum P(2) = 5.2e-14
Identities = 35/129 (27%), Positives = 55/129 (42%)
Query: 65 LDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAH 124
+ +A G H AV G ++ WG N GQ + P+ + SE +S
Sbjct: 94 ITVAAGSFHNGAVTEGGVVYMWGNNSSGQCAVANQPYVPEPQPISISDSETSPLLSVRV- 152
Query: 125 CTAAIAEPRENDGTISTSR-LWVWGQN-Q-G---SNFP--RLFWGAFTPNTIICQVSCGS 176
A E E+ +S SR +W WG Q G + FP + ++ Q++CG+
Sbjct: 153 LQLACGE--EHTLALSLSREIWAWGSGCQLGLITTTFPVTKPQKVEHLAGRVVLQIACGA 210
Query: 177 VHVVALSEC 185
H +AL +C
Sbjct: 211 YHSLALVQC 219
Score = 79 (32.9 bits), Expect = 2.5e-06, Sum P(3) = 2.5e-06
Identities = 46/214 (21%), Positives = 82/214 (38%)
Query: 105 PEKVKQLQSEFVKSISCGAHCTAAIAEPR--ENDGTISTSR--LWVWGQNQ------GSN 154
P + Q+ ++ + T A+ E D + + R +W WG+ + G
Sbjct: 480 PGLLSQVSPRLLRKVGRAKMRTVALTPTYSGEADALLPSLRTEVWSWGRGKDGQLGHGDV 539
Query: 155 FPRL--FWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPR 212
PRL + Q+S G H +AL+ + +WG N +GQLG P
Sbjct: 540 LPRLQPLCVKSLDGKEVIQLSAGGHHSLALTAKSQVYSWGSNIFGQLGH------TNSPT 593
Query: 213 VIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQ-LGHCSLQSGDKE 271
+ AK + + + G +S +++ E + GL GQ +L +
Sbjct: 594 TVPRLAKVCGDG-----VWSTAAGSDYSLFLADE-EDFQPGLYYCGQETATDNLSENNCS 647
Query: 272 LLPRRVVALDGI-FIKDVACGGVHSCALTSKGAL 304
P +++ I +I +V GG + L K +
Sbjct: 648 KNPVLLLSCSKIGYISNVIAGGDNCLVLVDKNIM 681
Score = 77 (32.2 bits), Expect = 6.7e-11, Sum P(2) = 6.7e-11
Identities = 46/187 (24%), Positives = 75/187 (40%)
Query: 75 AAVASD-GTLFTWGAN--EFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAE 131
AA+ ++ G L T G FG+L R PE+ S +++ G H A
Sbjct: 46 AALGTNHGLLLTEGGEVYSFGKL-----PWRSGPEEFCA-NSPILENTLLGQHVITVAAG 99
Query: 132 PRENDGTISTSRLWVWGQNQG-----SNFP--------RLFWGAFTP--NTIICQVSCGS 176
N +++WG N +N P + +P + + Q++CG
Sbjct: 100 SFHNGAVTEGGVVYMWGNNSSGQCAVANQPYVPEPQPISISDSETSPLLSVRVLQLACGE 159
Query: 177 VHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCG 236
H +ALS + AWG QLG T + P+ ++ A + + Q++CG
Sbjct: 160 EHTLALSLSREIWAWGSG--CQLGLITTTFPVTKPQKVEHLAGRV--------VLQIACG 209
Query: 237 EYHSAAV 243
YHS A+
Sbjct: 210 AYHSLAL 216
Score = 38 (18.4 bits), Expect = 2.5e-06, Sum P(3) = 2.5e-06
Identities = 7/19 (36%), Positives = 12/19 (63%)
Query: 356 HTLVYMRDGRIHGWGYNSY 374
H + Y ++G++ G G SY
Sbjct: 1091 HYVGYWKEGKMCGHGVYSY 1109
>UNIPROTKB|E1B827 [details] [associations]
symbol:NEK8 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0072372 "primary cilium" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0004674 "protein serine/threonine kinase
activity" evidence=IEA] InterPro:IPR000719 InterPro:IPR002290
InterPro:IPR008271 InterPro:IPR011009 InterPro:IPR017441
Pfam:PF00069 PROSITE:PS00107 PROSITE:PS00108 PROSITE:PS50011
SMART:SM00220 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005524
SUPFAM:SSF56112 GO:GO:0004674 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0072372 PRINTS:PR00633 PROSITE:PS50012
GeneTree:ENSGT00700000104137 OMA:EREVFAW EMBL:DAAA02048605
EMBL:DAAA02048606 IPI:IPI00700790 Ensembl:ENSBTAT00000020643
Uniprot:E1B827
Length = 698
Score = 234 (87.4 bits), Expect = 9.5e-16, Sum P(2) = 9.5e-16
Identities = 88/304 (28%), Positives = 133/304 (43%)
Query: 67 IACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCT 126
+ACG TA + G + T+G+ G LG G P V+ L + ++CGA
Sbjct: 402 VACGDLFTACLTDRGIIMTFGSGSNGCLGHGGLNDISQPTIVEALLGYEMVQVACGASHV 461
Query: 127 AAIAEPREND--GTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSE 184
A++ RE G RL + G + + P+ P +V CG V L+
Sbjct: 462 LALSTERELFAWGRGDGGRLGL-GTRESHSCPQQV--PMPPGQEAQRVICGIDSSVILTV 518
Query: 185 CGLLQAWGYNEYGQLGRGITCEGLQGPRV---IKGYAKF--LDEAP-ELEKITQVSCGEY 238
G A G N + +LG G + P + ++ F L AP + E + V G
Sbjct: 519 PGQALACGSNRFNKLGLDHLSLG-EEPALHQQVEEALNFTPLGSAPLDQEPLLSVDLGTA 577
Query: 239 HSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCAL 298
HSAAV+ +G+ YT+G GQLG + P +V L GI I VACG + A+
Sbjct: 578 HSAAVTASGDCYTFGSNQHGQLG---TNARRVSRAPCQVQGLQGIKIAMVACGDAFTVAI 634
Query: 299 TSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTL 358
++G +Y+WG G+LG + + P + D P V V+C H +TL
Sbjct: 635 GAEGEVYSWGKGARGRLGRRDEDAALPR-PVQLDE--------TQPYTVTSVSCCHGNTL 685
Query: 359 VYMR 362
+ +R
Sbjct: 686 LAIR 689
Score = 210 (79.0 bits), Expect = 5.0e-13, Sum P(2) = 5.0e-13
Identities = 95/351 (27%), Positives = 143/351 (40%)
Query: 61 NSRWLDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEG---RKHPEKVKQL---QSE 114
N+ + +A G A V G L W A G G G ++ P+ V + QS
Sbjct: 337 NTEVVQVAAGRTQKAGVTRSGRLILWEAPPLGAGGGALLPGAVEQQQPQFVSRFLEGQSG 396
Query: 115 F-VKSISCGAHCTAAIAEPR--ENDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQ 171
+K ++CG TA + + G+ S L G N S P + + Q
Sbjct: 397 VTIKHVACGDLFTACLTDRGIIMTFGSGSNGCLGHGGLNDISQ-PTIVEALLGYEMV--Q 453
Query: 172 VSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKIT 231
V+CG+ HV+ALS L AWG + G+LG G T E P+ + P ++
Sbjct: 454 VACGASHVLALSTERELFAWGRGDGGRLGLG-TRESHSCPQQVP--------MPPGQEAQ 504
Query: 232 QVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRV-----------VAL 280
+V CG S ++ G+ G +LG L G++ L ++V L
Sbjct: 505 RVICGIDSSVILTVPGQALACGSNRFNKLGLDHLSLGEEPALHQQVEEALNFTPLGSAPL 564
Query: 281 DGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPI 340
D + V G HS A+T+ G Y +G +Q GQLG R S P + + I I
Sbjct: 565 DQEPLLSVDLGTAHSAAVTASGDCYTFGSNQHGQLGTN--ARRVSRAPCQVQG-LQGIKI 621
Query: 341 LVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPV 391
+VACG + T+ +G ++ WG + G+ A P PV
Sbjct: 622 A-------MVACGDAFTVAIGAEGEVYSWGKGARGRLGRRDEDAA-LPRPV 664
Score = 159 (61.0 bits), Expect = 2.3e-07, Sum P(2) = 2.3e-07
Identities = 57/248 (22%), Positives = 101/248 (40%)
Query: 169 ICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELE 228
I V+CG + L++ G++ +G G LG G + P +++ +
Sbjct: 399 IKHVACGDLFTACLTDRGIIMTFGSGSNGCLGHG-GLNDISQPTIVEALLGY-------- 449
Query: 229 KITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDV 288
++ QV+CG H A+S E++ WG G G+LG L + + P++V G + V
Sbjct: 450 EMVQVACGASHVLALSTERELFAWGRGDGGRLG---LGTRESHSCPQQVPMPPGQEAQRV 506
Query: 289 ACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFS-LIPNESDTYFRNIPILVVP--- 344
CG S LT G A G ++ +LGL + + + + P+ P
Sbjct: 507 ICGIDSSVILTVPGQALACGSNRFNKLGLDHLSLGEEPALHQQVEEALNFTPLGSAPLDQ 566
Query: 345 NGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAA 403
+ V G +H+ G + +G N +GQ + P V G ++ +A
Sbjct: 567 EPLLSVDLGTAHSAAVTASGDCYTFGSNQHGQLGTNARRVSRAPCQVQGLQGIKIAMVAC 626
Query: 404 GGGHSAVL 411
G + +
Sbjct: 627 GDAFTVAI 634
Score = 38 (18.4 bits), Expect = 9.5e-16, Sum P(2) = 9.5e-16
Identities = 8/17 (47%), Positives = 10/17 (58%)
Query: 11 ARPVDNIPAKSAIYVWG 27
ARP P S++Y WG
Sbjct: 309 ARPAIP-PPLSSVYTWG 324
>UNIPROTKB|E1BIS5 [details] [associations]
symbol:WBSCR16 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005739 "mitochondrion" evidence=IEA]
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005739 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 GeneTree:ENSGT00700000104312 CTD:81554 OMA:MVTLAKS
EMBL:DAAA02058190 IPI:IPI00705939 RefSeq:NP_001179275.1
UniGene:Bt.1520 Ensembl:ENSBTAT00000015608 GeneID:513273
KEGG:bta:513273 NextBio:20870790 Uniprot:E1BIS5
Length = 464
Score = 219 (82.2 bits), Expect = 1.0e-15, Sum P(2) = 1.0e-15
Identities = 96/362 (26%), Positives = 152/362 (41%)
Query: 20 KSAIYVWGY--NHSGQTG----RKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEH 73
K VWG N Q G RK + R + P +R L ++CG H
Sbjct: 126 KDITKVWGMGLNKDSQLGFHRSRKDKTRGYEYVLEPSPVPLPLDRPQETRVLQVSCGRAH 185
Query: 74 TAAVASDGT-LFTWGANEFGQLGDGTEEGRKHPE--KVKQLQSEF---VKSISCGAHCTA 127
+ V +DG +F+ G N +GQ G E + E +V ++Q +F V ++CG +
Sbjct: 186 SL-VLTDGEGVFSMGNNSYGQCGRKVVENEIYSESHRVHRMQ-DFDGQVVQVACGQDHSL 243
Query: 128 AIAEPRE--NDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSEC 185
+ + E + G + + + N S +L G + QV+ +A+S
Sbjct: 244 FLTDQGEVYSCGWGADGQTGLGHYNITSTPTKL--GGDLAGVNVVQVATYGDCCLAVSAD 301
Query: 186 GLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSE 245
G L WG +EY QL + PR + F + ++ Q +CG A ++
Sbjct: 302 GGLFGWGNSEYLQLASVTDSTQVNVPRCLP----FSG----VGQVKQAACGGTGCAVLNG 353
Query: 246 NGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALD----GIFIKDVACGGVHSCALTSK 301
G V+ WG G +G+ G L++ E++P + L G+ + + CG H ALT++
Sbjct: 354 EGHVFVWGYGILGK-GPNLLETALPEMIPPTLFGLSEFNPGVQVSRIRCGLSHFAALTNR 412
Query: 302 GALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQL-VACGHSHTLVY 360
G L+ WG + G LG+G D YF P V G + VACG H +
Sbjct: 413 GELFVWGKNIRGCLGIG----------RLEDQYF---PWRVTMPGEPMDVACGVDHMVTL 459
Query: 361 MR 362
R
Sbjct: 460 AR 461
Score = 197 (74.4 bits), Expect = 3.6e-13, Sum P(2) = 3.6e-13
Identities = 63/217 (29%), Positives = 103/217 (47%)
Query: 167 TIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPE 226
T + QVSCG H + L++ + + G N YGQ GR + I + + +
Sbjct: 174 TRVLQVSCGRAHSLVLTDGEGVFSMGNNSYGQCGRKVV------ENEIYSESHRVHRMQD 227
Query: 227 LE-KITQVSCGEYHSAAVSENGEVYTWGLGSVGQ--LGHCSLQSGDKELLPRRVVA-LDG 282
+ ++ QV+CG+ HS +++ GEVY+ G G+ GQ LGH ++ S P ++ L G
Sbjct: 228 FDGQVVQVACGQDHSLFLTDQGEVYSCGWGADGQTGLGHYNITS-----TPTKLGGDLAG 282
Query: 283 IFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILV 342
+ + VA G A+++ G L+ WG S+ QL + + +P R +P
Sbjct: 283 VNVVQVATYGDCCLAVSADGGLFGWGNSEYLQLASVTDSTQVN-VP-------RCLPFSG 334
Query: 343 VPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAAN 379
V V+ ACG + V +G + WGY G+ N
Sbjct: 335 VGQ-VKQAACGGTGCAVLNGEGHVFVWGYGILGKGPN 370
Score = 158 (60.7 bits), Expect = 9.5e-09, Sum P(2) = 9.5e-09
Identities = 67/249 (26%), Positives = 99/249 (39%)
Query: 169 ICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELE 228
+ QV+CG H + L++ G + + G+ GQ G G P + G +L
Sbjct: 232 VVQVACGQDHSLFLTDQGEVYSCGWGADGQTGLG-HYNITSTPTKLGG---------DLA 281
Query: 229 KITQVSCGEYHSA--AVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIF-I 285
+ V Y AVS +G ++ WG QL S+ + +PR + G+ +
Sbjct: 282 GVNVVQVATYGDCCLAVSADGGLFGWGNSEYLQLA--SVTDSTQVNVPR-CLPFSGVGQV 338
Query: 286 KDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPN 345
K ACGG L +G ++ WG G LG GP +L T F +
Sbjct: 339 KQAACGGTGCAVLNGEGHVFVWG---YGILGKGPNLLETALPEMIPPTLFG---LSEFNP 392
Query: 346 GVQL--VACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAA 403
GVQ+ + CG SH G + WG N G + ++P V GE +A
Sbjct: 393 GVQVSRIRCGLSHFAALTNRGELFVWGKNIRGCLGIGRLEDQYFPWRVTM-PGEPMDVAC 451
Query: 404 GGGHSAVLA 412
G H LA
Sbjct: 452 GVDHMVTLA 460
Score = 47 (21.6 bits), Expect = 1.0e-15, Sum P(2) = 1.0e-15
Identities = 11/31 (35%), Positives = 16/31 (51%)
Query: 5 EIIGETARPVDNIPAKSAIYVWGYNHSGQTG 35
+ +GE A D I +VWG++ SG G
Sbjct: 49 QYVGERATRADRI------FVWGFSFSGALG 73
>DICTYBASE|DDB_G0269934 [details] [associations]
symbol:DDB_G0269934 "Ras GTPase activation
domain-containing protein" species:44689 "Dictyostelium discoideum"
[GO:0051056 "regulation of small GTPase mediated signal
transduction" evidence=IEA] [GO:0043547 "positive regulation of
GTPase activity" evidence=IEA] [GO:0035023 "regulation of Rho
protein signal transduction" evidence=IEA] [GO:0007165 "signal
transduction" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0005096 "GTPase activator activity" evidence=IEA]
[GO:0005089 "Rho guanyl-nucleotide exchange factor activity"
evidence=IEA] InterPro:IPR000219 InterPro:IPR001936
InterPro:IPR008936 Pfam:PF00616 Pfam:PF00621 PROSITE:PS50010
PROSITE:PS50018 SMART:SM00323 dictyBase:DDB_G0269934
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0007165 EMBL:AAFI02000005
GO:GO:0005096 GO:GO:0043547 SUPFAM:SSF48350 GO:GO:0005622
GO:GO:0005089 Gene3D:1.20.900.10 SUPFAM:SSF48065 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0035023 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 Gene3D:1.10.506.10 eggNOG:COG5261
RefSeq:XP_646416.1 ProteinModelPortal:Q55CR5
EnsemblProtists:DDB0233497 GeneID:8617373 KEGG:ddi:DDB_G0269934
InParanoid:Q55CR5 OMA:SHTEYEN Uniprot:Q55CR5
Length = 2044
Score = 233 (87.1 bits), Expect = 1.3e-15, P = 1.3e-15
Identities = 70/250 (28%), Positives = 111/250 (44%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWL-DIACGHEHTA 75
+ A + WG +GQ G Q+ PK + S W+ + CG +HT
Sbjct: 819 VRANGELLTWGVGENGQLGHGDTNNQIE-PKIIQ--------SLTSFWITQVQCGEKHTI 869
Query: 76 AVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGA-HCTAAIAEPRE 134
+ +G +++WGA+E+GQLG G P +V L+ V I+ G+ HC A + +E
Sbjct: 870 CLTKNGKVYSWGASEYGQLGLGDVTQHSSPMQVSALEKYNVLQIASGSTHC-AVLTTSKE 928
Query: 135 NDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYN 194
+ G + P L I ++ CG A++ECG + WG
Sbjct: 929 ---VLVFGNGAAMGAASVVSLPTLV--PSLKYLHIDRLCCGHYSTAAITECGDVYTWGTG 983
Query: 195 EYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGL 254
+ +LG G P++I EA + I Q+SCG H+A ++++G ++T G
Sbjct: 984 Q--ELGHGGNSTETS-PKLI--------EALRNQSIRQISCGGRHTAFLTDSGRIFTCGK 1032
Query: 255 GSVGQLGHCS 264
S GQLG S
Sbjct: 1033 DSFGQLGQMS 1042
Score = 228 (85.3 bits), Expect = 6.8e-14, Sum P(2) = 6.8e-14
Identities = 56/157 (35%), Positives = 80/157 (50%)
Query: 169 ICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELE 228
IC +S GS + L+E G + WG + G+ P++ F E+ L
Sbjct: 751 ICSISSGSYYSSVLTENGDVYLWGRGAVKT--PAVPILGI--PQIEDQLLPFKLES--LS 804
Query: 229 KITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDV 288
+ VS G H AAV NGE+ TWG+G GQLGH + ++ P+ + +L +I V
Sbjct: 805 DVVSVSIGFCHGAAVRANGELLTWGVGENGQLGHGDTNN---QIEPKIIQSLTSFWITQV 861
Query: 289 ACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFS 325
CG H+ LT G +Y+WG S+ GQLGLG T+ S
Sbjct: 862 QCGEKHTICLTKNGKVYSWGASEYGQLGLGDVTQHSS 898
Score = 207 (77.9 bits), Expect = 1.4e-11, Sum P(2) = 1.4e-11
Identities = 68/241 (28%), Positives = 108/241 (44%)
Query: 188 LQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENG 247
L WG +LG +T + P + F P+ I +S G Y+S+ ++ENG
Sbjct: 715 LMTWGSASNCKLGFKVTAKDQSQPTPER-LPNF--NIPD---ICSISSGSYYSSVLTENG 768
Query: 248 EVYTWGLGSVGQ--LGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALY 305
+VY WG G+V + + + +LLP ++ +L + V+ G H A+ + G L
Sbjct: 769 DVYLWGRGAVKTPAVPILGIPQIEDQLLPFKLESLSDVV--SVSIGFCHGAAVRANGELL 826
Query: 306 AWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGR 365
WG + GQLG G +S T F + V CG HT+ ++G+
Sbjct: 827 TWGVGENGQLGHGDTNNQIEPKIIQSLTSF----------WITQVQCGEKHTICLTKNGK 876
Query: 366 IHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE---VRKLAAGGGHSAVLADACSLKELCE 422
++ WG + YGQ T + SP+ E V ++A+G H AVL + KE+
Sbjct: 877 VYSWGASEYGQLGLGDVTQ--HSSPMQVSALEKYNVLQIASGSTHCAVLTTS---KEVLV 931
Query: 423 F 423
F
Sbjct: 932 F 932
Score = 195 (73.7 bits), Expect = 1.8e-11, P = 1.8e-11
Identities = 80/325 (24%), Positives = 137/325 (42%)
Query: 7 IGETA-RPVDNIPAKSAIYVWGYNHSGQTGRK--GRERQLRIPKQLPPELFGCPAGANSR 63
+ TA R ++ + WG + + G K +++ P++LP F P +
Sbjct: 698 LSSTAHRSAIHLDTSRGLMTWGSASNCKLGFKVTAKDQSQPTPERLPN--FNIPDICS-- 753
Query: 64 WLDIACGHEHTAAVASDGTLFTWGANEFGQ-----LGDGTEEGRKHPEKVKQLQSEFVKS 118
I+ G +++ + +G ++ WG LG E + P K++ L V S
Sbjct: 754 ---ISSGSYYSSVLTENGDVYLWGRGAVKTPAVPILGIPQIEDQLLPFKLESLSD--VVS 808
Query: 119 ISCG-AHCTAAIAEPRENDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSV 177
+S G H A A + + G P++ + T + I QV CG
Sbjct: 809 VSIGFCHGAAVRANGELLTWGVGENGQLGHGDTNNQIEPKIIQ-SLT-SFWITQVQCGEK 866
Query: 178 HVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGE 237
H + L++ G + +WG +EYGQLG G + P + K+ + Q++ G
Sbjct: 867 HTICLTKNGKVYSWGASEYGQLGLGDVTQH-SSPMQVSALEKY--------NVLQIASGS 917
Query: 238 YHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCA 297
H A ++ + EV +G G+ +G S+ S LP V +L + I + CG + A
Sbjct: 918 THCAVLTTSKEVLVFGNGAA--MGAASVVS-----LPTLVPSLKYLHIDRLCCGHYSTAA 970
Query: 298 LTSKGALYAWG-GSQAGQLGLGPQT 321
+T G +Y WG G + G G +T
Sbjct: 971 ITECGDVYTWGTGQELGHGGNSTET 995
Score = 189 (71.6 bits), Expect = 8.2e-11, P = 8.2e-11
Identities = 81/304 (26%), Positives = 129/304 (42%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+Y+WG G + L IP Q+ +L + S + ++ G H AAV ++G
Sbjct: 770 VYLWG---RGAV-KTPAVPILGIP-QIEDQLLPFKLESLSDVVSVSIGFCHGAAVRANGE 824
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
L TWG E GQLG G + P+ ++ L S ++ + CG T + +
Sbjct: 825 LLTWGVGENGQLGHGDTNNQIEPKIIQSLTSFWITQVQCGEKHTICLTK---------NG 875
Query: 143 RLWVWGQNQGSNFPRLFWGAFTPNTIICQVSC-GSVHVVALSE----CGLLQAWGYNEYG 197
+++ WG S + +L G T ++ QVS +V+ ++ C +L E
Sbjct: 876 KVYSWG---ASEYGQLGLGDVTQHSSPMQVSALEKYNVLQIASGSTHCAVLTT--SKEVL 930
Query: 198 QLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSV 257
G G G + + L I ++ CG Y +AA++E G+VYTWG G
Sbjct: 931 VFGNGAA----MGAASVVSLPTLVPSLKYLH-IDRLCCGHYSTAAITECGDVYTWGTGQ- 984
Query: 258 GQLGHC--SLQSGDK--ELLPR---RVVALDG---IFIKDVACGGVHSCALTSKGALYAW 307
+LGH S ++ K E L R ++ G F+ D G + +C S G L
Sbjct: 985 -ELGHGGNSTETSPKLIEALRNQSIRQISCGGRHTAFLTD--SGRIFTCGKDSFGQLGQM 1041
Query: 308 GGSQ 311
G Q
Sbjct: 1042 SGDQ 1045
Score = 165 (63.1 bits), Expect = 5.3e-07, Sum P(2) = 5.3e-07
Identities = 34/87 (39%), Positives = 49/87 (56%)
Query: 230 ITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVA 289
I ++ CG Y +AA++E G+VYTWG G +LGH E P+ + AL I+ ++
Sbjct: 958 IDRLCCGHYSTAAITECGDVYTWGTGQ--ELGH---GGNSTETSPKLIEALRNQSIRQIS 1012
Query: 290 CGGVHSCALTSKGALYAWGGSQAGQLG 316
CGG H+ LT G ++ G GQLG
Sbjct: 1013 CGGRHTAFLTDSGRIFTCGKDSFGQLG 1039
Score = 152 (58.6 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 42/130 (32%), Positives = 67/130 (51%)
Query: 169 ICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELE 228
I ++ CG A++ECG + WG + +LG G P++I EA +
Sbjct: 958 IDRLCCGHYSTAAITECGDVYTWGTGQ--ELGHGGNSTETS-PKLI--------EALRNQ 1006
Query: 229 KITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDV 288
I Q+SCG H+A ++++G ++T G S GQLG SGD+ P+R+ +L V
Sbjct: 1007 SIRQISCGGRHTAFLTDSGRIFTCGKDSFGQLGQ---MSGDQNK-PKRIESLTKTTFISV 1062
Query: 289 ACGGVHSCAL 298
+CG ++ AL
Sbjct: 1063 SCGENYNVAL 1072
Score = 139 (54.0 bits), Expect = 0.00032, Sum P(2) = 0.00032
Identities = 39/119 (32%), Positives = 59/119 (49%)
Query: 67 IACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCT 126
+ CGH TAA+ G ++TWG + +LG G P+ ++ L+++ ++ ISCG T
Sbjct: 961 LCCGHYSTAAITECGDVYTWGTGQ--ELGHGGNSTETSPKLIEALRNQSIRQISCGGRHT 1018
Query: 127 AAIAEPRE--NDGTISTSRLWVWGQNQGS-NFPRLFWGAFTPNTIICQVSCGSVHVVAL 182
A + + G S +L GQ G N P+ + T T I VSCG + VAL
Sbjct: 1019 AFLTDSGRIFTCGKDSFGQL---GQMSGDQNKPKRI-ESLTKTTFI-SVSCGENYNVAL 1072
Score = 39 (18.8 bits), Expect = 6.8e-14, Sum P(2) = 6.8e-14
Identities = 8/26 (30%), Positives = 13/26 (50%)
Query: 39 RERQLRIPKQLPPELFGCPAGANSRW 64
+++Q + P Q PP+ PA W
Sbjct: 146 QQQQQQPPSQQPPKSTSPPALPRREW 171
>MGI|MGI:2137600 [details] [associations]
symbol:Wbscr16 "Williams-Beuren syndrome chromosome region
16 homolog (human)" species:10090 "Mus musculus" [GO:0005087 "Ran
guanyl-nucleotide exchange factor activity" evidence=NAS]
[GO:0005739 "mitochondrion" evidence=IDA] [GO:0050790 "regulation
of catalytic activity" evidence=NAS] MGI:MGI:2137600
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005739 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0005087 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 eggNOG:COG5184
GeneTree:ENSGT00700000104312 CTD:81554 HOGENOM:HOG000232125
HOVERGEN:HBG054246 OMA:MVTLAKS OrthoDB:EOG4F1X33 EMBL:AK017733
EMBL:BC024714 EMBL:BC055335 IPI:IPI00111460 RefSeq:NP_291050.1
UniGene:Mm.29508 ProteinModelPortal:Q9CYF5 SMR:Q9CYF5 STRING:Q9CYF5
PhosphoSite:Q9CYF5 PRIDE:Q9CYF5 Ensembl:ENSMUST00000076228
GeneID:94254 KEGG:mmu:94254 InParanoid:Q9CYF5 NextBio:352275
Bgee:Q9CYF5 Genevestigator:Q9CYF5 GermOnline:ENSMUSG00000061979
Uniprot:Q9CYF5
Length = 461
Score = 217 (81.4 bits), Expect = 2.1e-15, Sum P(2) = 2.1e-15
Identities = 84/316 (26%), Positives = 134/316 (42%)
Query: 20 KSAIYVWGY--NHSGQTG----RKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEH 73
K VWG N Q G RK + R + P ++ L ++CG H
Sbjct: 123 KDVTKVWGMGLNKDSQLGFHRSRKDKTRGYEYVLEPSPVPLPLDRPQETKVLQVSCGRAH 182
Query: 74 TAAVASDGTLFTWGANEFGQLGDGTEEGRKHPE--KVKQLQSEF---VKSISCGAHCTAA 128
+ + +F+ G N GQ G E + E KV ++Q +F V + CG +
Sbjct: 183 SLVLTDREGVFSMGNNSHGQCGRKVVEDEVYSESHKVHRMQ-DFDGQVVQVVCGQDHSLF 241
Query: 129 IAEPRE--NDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECG 186
+ + E + G + + + N S P G T++ QV+ +ALS G
Sbjct: 242 LTDKGEVYSCGWGADGQTGLGHYNITST-PSKLGGDLAGVTVV-QVATYGDCCLALSADG 299
Query: 187 LLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSEN 246
+ WG +EY QL + PR + F + K+ QV+CG A ++
Sbjct: 300 GVFGWGNSEYLQLASVTDSTQVNVPRCLP----FSG----VGKVKQVACGGTGCAVLNAE 351
Query: 247 GEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDG----IFIKDVACGGVHSCALTSKG 302
G V+ WG G +G+ G L++ E++P + L + + + CG H ALT+KG
Sbjct: 352 GHVFVWGYGILGK-GPKLLETAIPEMIPPTLFGLTEFNPEVQVSQIRCGLSHFAALTNKG 410
Query: 303 ALYAWGGSQAGQLGLG 318
L+ WG + G LG+G
Sbjct: 411 ELFVWGKNIRGCLGIG 426
Score = 189 (71.6 bits), Expect = 3.7e-12, Sum P(2) = 3.7e-12
Identities = 63/213 (29%), Positives = 102/213 (47%)
Query: 167 TIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPE 226
T + QVSCG H + L++ + + G N +GQ GR + + V K + +
Sbjct: 171 TKVLQVSCGRAHSLVLTDREGVFSMGNNSHGQCGRKVVED-----EVYSESHK-VHRMQD 224
Query: 227 LE-KITQVSCGEYHSAAVSENGEVYTWGLGSVGQ--LGHCSLQSGDKELLPRRVVALDGI 283
+ ++ QV CG+ HS +++ GEVY+ G G+ GQ LGH ++ S +L L G+
Sbjct: 225 FDGQVVQVVCGQDHSLFLTDKGEVYSCGWGADGQTGLGHYNITSTPSKLGGD----LAGV 280
Query: 284 FIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVV 343
+ VA G AL++ G ++ WG S+ QL + + +P R +P V
Sbjct: 281 TVVQVATYGDCCLALSADGGVFGWGNSEYLQLASVTDSTQVN-VP-------RCLPFSGV 332
Query: 344 PNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQ 376
V+ VACG + V +G + WGY G+
Sbjct: 333 GK-VKQVACGGTGCAVLNAEGHVFVWGYGILGK 364
Score = 182 (69.1 bits), Expect = 2.3e-11, Sum P(2) = 2.3e-11
Identities = 75/285 (26%), Positives = 121/285 (42%)
Query: 20 KSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVAS 79
+ ++ G N GQ GRK E ++ + + + + + CG +H+ +
Sbjct: 189 REGVFSMGNNSHGQCGRKVVEDEVYSESHKVHRM----QDFDGQVVQVVCGQDHSLFLTD 244
Query: 80 DGTLFT--WGANEFGQLGDGTEEGRKHPEKVK-QLQSEFVKSISCGAHCTAAIAEPREND 136
G +++ WGA+ GQ G G P K+ L V ++ C A++
Sbjct: 245 KGEVYSCGWGAD--GQTGLGHYNITSTPSKLGGDLAGVTVVQVATYGDCCLALSADGGVF 302
Query: 137 GTISTSRLWVWGQNQGS--NFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYN 194
G ++ L + + N PR F+ + QV+CG L+ G + WGY
Sbjct: 303 GWGNSEYLQLASVTDSTQVNVPRCL--PFSGVGKVKQVACGGTGCAVLNAEGHVFVWGY- 359
Query: 195 EYGQLGRGITCEGLQGPRVIKGYAKFLDEA-PELEKITQVSCGEYHSAAVSENGEVYTWG 253
G LG+G P +I L E PE++ ++Q+ CG H AA++ GE++ WG
Sbjct: 360 --GILGKGPKLLETAIPEMIPPTLFGLTEFNPEVQ-VSQIRCGLSHFAALTNKGELFVWG 416
Query: 254 LGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCAL 298
G LG L+ + P RV + G + DVACG H L
Sbjct: 417 KNIRGCLGIGRLED---QYFPWRVT-MPGEPV-DVACGVDHMVTL 456
Score = 160 (61.4 bits), Expect = 7.1e-09, Sum P(2) = 7.1e-09
Identities = 66/247 (26%), Positives = 99/247 (40%)
Query: 169 ICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELE 228
+ QV CG H + L++ G + + G+ GQ G G P + G +L
Sbjct: 229 VVQVVCGQDHSLFLTDKGEVYSCGWGADGQTGLG-HYNITSTPSKLGG---------DLA 278
Query: 229 KITQVSCGEYHSA--AVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIF-I 285
+T V Y A+S +G V+ WG QL S+ + +PR + G+ +
Sbjct: 279 GVTVVQVATYGDCCLALSADGGVFGWGNSEYLQLA--SVTDSTQVNVPR-CLPFSGVGKV 335
Query: 286 KDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPN 345
K VACGG L ++G ++ WG G LG GP+ ++ T F +
Sbjct: 336 KQVACGGTGCAVLNAEGHVFVWG---YGILGKGPKLLETAIPEMIPPTLF-GLTEFNPEV 391
Query: 346 GVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGG 405
V + CG SH G + WG N G + ++P V GE +A G
Sbjct: 392 QVSQIRCGLSHFAALTNKGELFVWGKNIRGCLGIGRLEDQYFPWRVTM-PGEPVDVACGV 450
Query: 406 GHSAVLA 412
H LA
Sbjct: 451 DHMVTLA 457
Score = 144 (55.7 bits), Expect = 9.1e-07, P = 9.1e-07
Identities = 38/114 (33%), Positives = 56/114 (49%)
Query: 19 AKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPA-GANSRWLDIACGHEHTAAV 77
A+ ++VWGY G G+ + + IP+ +PP LFG + I CG H AA+
Sbjct: 350 AEGHVFVWGY---GILGKGPKLLETAIPEMIPPTLFGLTEFNPEVQVSQIRCGLSHFAAL 406
Query: 78 ASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAE 131
+ G LF WG N G LG G E + P +V + E V ++CG +A+
Sbjct: 407 TNKGELFVWGKNIRGCLGIGRLEDQYFPWRVT-MPGEPV-DVACGVDHMVTLAK 458
Score = 46 (21.3 bits), Expect = 2.1e-15, Sum P(2) = 2.1e-15
Identities = 10/31 (32%), Positives = 16/31 (51%)
Query: 5 EIIGETARPVDNIPAKSAIYVWGYNHSGQTG 35
+ +GE A D + +VWG++ SG G
Sbjct: 46 QYVGERAARADRV------FVWGFSFSGALG 70
>DICTYBASE|DDB_G0276527 [details] [associations]
symbol:DDB_G0276527 "putative bifunctional
serine/threonine-protein kinase/ubiquitin-protein ligase
DDB_G0276527" species:44689 "Dictyostelium discoideum" [GO:0016772
"transferase activity, transferring phosphorus-containing groups"
evidence=IEA] [GO:0006468 "protein phosphorylation" evidence=IEA]
[GO:0006464 "cellular protein modification process" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0004674 "protein serine/threonine kinase
activity" evidence=IEA] [GO:0004672 "protein kinase activity"
evidence=IEA] [GO:0016874 "ligase activity" evidence=IEA]
[GO:0016740 "transferase activity" evidence=IEA] [GO:0016310
"phosphorylation" evidence=IEA] [GO:0016301 "kinase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA] Pfam:PF00632
InterPro:IPR000569 InterPro:IPR000719 InterPro:IPR008271
InterPro:IPR011009 Pfam:PF00069 PROSITE:PS00107 PROSITE:PS00108
PROSITE:PS50011 PROSITE:PS50237 SMART:SM00119 UniPathway:UPA00143
dictyBase:DDB_G0276527 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005524 eggNOG:COG0515 SUPFAM:SSF56112 GO:GO:0004674
GO:GO:0005622 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626
PROSITE:PS50012 EMBL:AAFI02000015 SUPFAM:SSF56204 HSSP:Q9H0M0
RefSeq:XP_643080.1 ProteinModelPortal:Q8SSY6
EnsemblProtists:DDB0219986 GeneID:8620484 KEGG:ddi:DDB_G0276527
InParanoid:Q8SSY6 OMA:IITIIVE Uniprot:Q8SSY6
Length = 1887
Score = 215 (80.7 bits), Expect = 1.1e-13, P = 1.1e-13
Identities = 94/377 (24%), Positives = 159/377 (42%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+Y +G G+ G G PK + E F + R + IA G +H+ A+ G
Sbjct: 209 LYTFGDGLLGKLGH-GNLESYSSPKLV--EFF--QTKPSLRVVSIANGGKHSLALTICGK 263
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
+++WG N+ QLG G + + QL + + + + N+
Sbjct: 264 VYSWGGNDSCQLGLGNGSSSSY-YSLPQLINFNISYNNNNNNNNNNSTNNNNNNNNDGAQ 322
Query: 143 RLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRG 202
+ + QN SN ++ I ++SCG+ +++ GLL +G ++G+LG G
Sbjct: 323 QQFSLSQNSSSNNNKIK---------IVKLSCGTNRSAVITDKGLLFTFGRGDHGRLGLG 373
Query: 203 ITCEGLQG-PRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLG 261
+Q P++++ I +S G HS ++ G V+++G GQLG
Sbjct: 374 EQSLLMQSTPKLVQSLQGHF--------IIDMSSGGGHSLVLTNKGLVFSFGRNDQGQLG 425
Query: 262 -HCSLQSGDKELLPRRVVALDG--------IFIKDVACGGVHSCALTSKGALYAWGGSQA 312
C +++ +P+++ I I V+ GG HS A++ YAWG S
Sbjct: 426 IGCF---SNQQTIPKQIQWFQTSQQQQQQPINIIKVSAGGYHSIAISDNNDTYAWGRSDY 482
Query: 313 GQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQL-------VACGHSHTLVYMRDGR 365
G LG I + D RN+P+L+ N V + V+ G H + DG
Sbjct: 483 GVLGTS--------IDVQGD---RNLPVLINSNSVVVDNVKFIDVSSGFQHNVAMSIDGS 531
Query: 366 IHGWGYNSYGQAANEKS 382
++ WG N+ GQ KS
Sbjct: 532 LYSWGCNA-GQRLGFKS 547
Score = 210 (79.0 bits), Expect = 2.1e-15, Sum P(2) = 2.1e-15
Identities = 54/165 (32%), Positives = 83/165 (50%)
Query: 169 ICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELE 228
I +S G H + L+ GL+ ++G N+ GQLG G P+ I+ + + +
Sbjct: 394 IIDMSSGGGHSLVLTNKGLVFSFGRNDQGQLGIGCFSNQQTIPKQIQWFQTSQQQQQQPI 453
Query: 229 KITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKEL---LPRRVVALDGIFI 285
I +VS G YHS A+S+N + Y WG G LG GD+ L + V +D +
Sbjct: 454 NIIKVSAGGYHSIAISDNNDTYAWGRSDYGVLGTSIDVQGDRNLPVLINSNSVVVDNVKF 513
Query: 286 KDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNE 330
DV+ G H+ A++ G+LY+WG AGQ LG ++ L P +
Sbjct: 514 IDVSSGFQHNVAMSIDGSLYSWG-CNAGQR-LGFKSDENQLTPKK 556
Score = 195 (73.7 bits), Expect = 1.7e-11, P = 1.7e-11
Identities = 60/222 (27%), Positives = 105/222 (47%)
Query: 67 IACGHEHTAAVASDGTLFTWGANEFGQLGDGTEE--GRKHPEKVKQLQSEFVKSISCGAH 124
++CG +A + G LFT+G + G+LG G + + P+ V+ LQ F+ +S G
Sbjct: 343 LSCGTNRSAVITDKGLLFTFGRGDHGRLGLGEQSLLMQSTPKLVQSLQGHFIIDMSSGGG 402
Query: 125 CTAAIAEPRE--NDGTISTSRLWVWGQNQGSNFPR-LFWGAFT------PNTIICQVSCG 175
+ + + G +L + + P+ + W + P II +VS G
Sbjct: 403 HSLVLTNKGLVFSFGRNDQGQLGIGCFSNQQTIPKQIQWFQTSQQQQQQPINII-KVSAG 461
Query: 176 SVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQG-PRVIKGYAKFLDEAPELEKITQVS 234
H +A+S+ AWG ++YG LG I +G + P +I + +D K VS
Sbjct: 462 GYHSIAISDNNDTYAWGRSDYGVLGTSIDVQGDRNLPVLINSNSVVVDNV----KFIDVS 517
Query: 235 CGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRR 276
G H+ A+S +G +Y+WG + +LG +S + +L P++
Sbjct: 518 SGFQHNVAMSIDGSLYSWGCNAGQRLG---FKSDENQLTPKK 556
Score = 178 (67.7 bits), Expect = 1.2e-09, P = 1.2e-09
Identities = 38/102 (37%), Positives = 60/102 (58%)
Query: 228 EKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKD 287
+KI +S G HS+ +++ G +YT+G G +G+LGH +L+S L + +
Sbjct: 188 QKIVLISTGAIHSSFITDQGNLYTFGDGLLGKLGHGNLESYSSPKLVEFFQTKPSLRVVS 247
Query: 288 VACGGVHSCALTSKGALYAWGGSQAGQLGLGP-QTRSFSLIP 328
+A GG HS ALT G +Y+WGG+ + QLGLG + S+ +P
Sbjct: 248 IANGGKHSLALTICGKVYSWGGNDSCQLGLGNGSSSSYYSLP 289
Score = 114 (45.2 bits), Expect = 2.8e-08, Sum P(2) = 2.8e-08
Identities = 36/148 (24%), Positives = 65/148 (43%)
Query: 134 ENDGTISTSRLWVWGQN----QGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQ 189
+ D S + +WG + N + + I +S G++H +++ G L
Sbjct: 151 DKDELESDHYITIWGNGIRNYKNCNMSSIGFSEMYNQQKIVLISTGAIHSSFITDQGNLY 210
Query: 190 AWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEV 249
+G G+LG G E P++++ F P L ++ ++ G HS A++ G+V
Sbjct: 211 TFGDGLLGKLGHG-NLESYSSPKLVE----FFQTKPSL-RVVSIANGGKHSLALTICGKV 264
Query: 250 YTWGLGSVGQLGHCSLQSGDKELLPRRV 277
Y+WG QLG + S LP+ +
Sbjct: 265 YSWGGNDSCQLGLGNGSSSSYYSLPQLI 292
Score = 104 (41.7 bits), Expect = 2.8e-08, Sum P(2) = 2.8e-08
Identities = 37/141 (26%), Positives = 61/141 (43%)
Query: 283 IFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILV 342
I I ++CG S +T KG L+ +G G+LGLG Q SL+ + +++
Sbjct: 338 IKIVKLSCGTNRSAVITDKGLLFTFGRGDHGRLGLGEQ----SLLMQSTPKLVQSLQGHF 393
Query: 343 VPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAA-NEKSTYAWYPSPVDWCVGE---- 397
+ + ++ G H+LV G + +G N GQ S P + W
Sbjct: 394 IID----MSSGGGHSLVLTNKGLVFSFGRNDQGQLGIGCFSNQQTIPKQIQWFQTSQQQQ 449
Query: 398 -----VRKLAAGGGHSAVLAD 413
+ K++AGG HS ++D
Sbjct: 450 QQPINIIKVSAGGYHSIAISD 470
Score = 80 (33.2 bits), Expect = 9.4e-05, Sum P(2) = 9.4e-05
Identities = 36/136 (26%), Positives = 57/136 (41%)
Query: 70 GHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAI 129
GHE + SD + WG N + E Q + + IS GA ++ I
Sbjct: 148 GHEDKDELESDHYITIWG-NGIRNYKNCNMSSIGFSEMYNQQK---IVLISTGAIHSSFI 203
Query: 130 AEPRENDGTISTSRLWVWGQNQGSNF--PRLFWGAFT-PNTIICQVSCGSVHVVALSECG 186
+ + N T L G ++ P+L T P+ + ++ G H +AL+ CG
Sbjct: 204 TD-QGNLYTFGDGLLGKLGHGNLESYSSPKLVEFFQTKPSLRVVSIANGGKHSLALTICG 262
Query: 187 LLQAWGYNEYGQLGRG 202
+ +WG N+ QLG G
Sbjct: 263 KVYSWGGNDSCQLGLG 278
Score = 72 (30.4 bits), Expect = 2.1e-15, Sum P(2) = 2.1e-15
Identities = 15/48 (31%), Positives = 26/48 (54%)
Query: 67 IACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSE 114
I+ G H++ + G L+T+G G+LG G E P+ V+ Q++
Sbjct: 193 ISTGAIHSSFITDQGNLYTFGDGLLGKLGHGNLESYSSPKLVEFFQTK 240
>UNIPROTKB|C9JW69 [details] [associations]
symbol:RCC1 "Regulator of chromosome condensation"
species:9606 "Homo sapiens" [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0031965 "nuclear
membrane" evidence=IDA] INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0031965 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
EMBL:AL513497 HGNC:HGNC:1913 HOGENOM:HOG000234341 IPI:IPI00787306
ProteinModelPortal:C9JW69 SMR:C9JW69 STRING:C9JW69
Ensembl:ENST00000411533 ArrayExpress:C9JW69 Bgee:C9JW69
Uniprot:C9JW69
Length = 372
Score = 218 (81.8 bits), Expect = 2.4e-15, P = 2.4e-15
Identities = 75/267 (28%), Positives = 122/267 (45%)
Query: 165 PNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEA 224
P ++ Q G +H V LS+ G + ++G N+ G LGR + EG + ++ G +
Sbjct: 83 PEDVV-QAEAGGMHTVCLSKSGQVYSFGCNDEGALGRDTSVEGSE---MVPGKVELQ--- 135
Query: 225 PELEKITQVSCGEYHSAAVSENGEVYTWGL--GSVGQLGHCSLQSGDKELLPRRVVALDG 282
EK+ QVS G+ H+AA++++G V+ WG + G +G L+ K ++P +V LD
Sbjct: 136 ---EKVVQVSAGDSHTAALTDDGRVFLWGSFRDNNGVIG--LLEPMKKSMVPVQV-QLDV 189
Query: 283 IFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILV 342
+K VA G H LT+ G LY G + GQLG P+ L N + + L+
Sbjct: 190 PVVK-VASGNDHLVMLTADGDLYTLGCGEQGQLGRVPE-----LFANRGGR--QGLERLL 241
Query: 343 VPNGVQLVA-------------CGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPS 389
VP V L + CG T +G ++G+G ++Y Q + + P
Sbjct: 242 VPKCVMLKSRGSRGHVRFQDAFCGAYFTFAISHEGHVYGFGLSNYHQLGTPGTESCFIPQ 301
Query: 390 PVDWCVGEVRKLA--AGGGHSAVLADA 414
+ + +GG H V D+
Sbjct: 302 NLTSFKNSTKSWVGFSGGQHHTVCMDS 328
Score = 192 (72.6 bits), Expect = 2.4e-12, P = 2.4e-12
Identities = 88/306 (28%), Positives = 136/306 (44%)
Query: 70 GHEHTAAVASDGTLFTWGANEFGQLG-DGTEEGRKH-PEKVKQLQSEFVKSISCGAHCTA 127
G HT ++ G ++++G N+ G LG D + EG + P KV +LQ + V+ +S G TA
Sbjct: 92 GGMHTVCLSKSGQVYSFGCNDEGALGRDTSVEGSEMVPGKV-ELQEKVVQ-VSAGDSHTA 149
Query: 128 AIAEPRENDGTISTSRLWVWGQNQGSN----FPRLFWGAFTPNTI-----ICQVSCGSVH 178
A+ + DG R+++WG + +N + P + + +V+ G+ H
Sbjct: 150 ALTD----DG-----RVFLWGSFRDNNGVIGLLEPMKKSMVPVQVQLDVPVVKVASGNDH 200
Query: 179 VVALSECGLLQAWGYNEYGQLGRG----ITCEGLQG-PRVIKGYAKFLDEAPELEKIT-- 231
+V L+ G L G E GQLGR G QG R++ L +
Sbjct: 201 LVMLTADGDLYTLGCGEQGQLGRVPELFANRGGRQGLERLLVPKCVMLKSRGSRGHVRFQ 260
Query: 232 QVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVA-C 290
CG Y + A+S G VY +GL + QLG +S +P+ + + V
Sbjct: 261 DAFCGAYFTFAISHEGHVYGFGLSNYHQLGTPGTESC---FIPQNLTSFKNSTKSWVGFS 317
Query: 291 GGVH-SCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQL 349
GG H + + S+G Y+ G ++ G+LGLG S IP T +P V
Sbjct: 318 GGQHHTVCMDSEGKAYSLGRAEYGRLGLGEGAEEKS-IP----TLISRLP------AVSS 366
Query: 350 VACGHS 355
VACG S
Sbjct: 367 VACGAS 372
Score = 163 (62.4 bits), Expect = 4.6e-09, P = 4.6e-09
Identities = 87/337 (25%), Positives = 144/337 (42%)
Query: 68 ACGHEHTAAVASDGTLFTWGANEFGQLGDGTEE-GRKHPEKVKQLQSEFVKSISCGAHCT 126
+C H + G + T G + GQLG G RK P V + + V++ + G H T
Sbjct: 39 SCQVSHRSHSTEPGLVLTLGQGDVGQLGLGENVMERKKPALVS-IPEDVVQAEAGGMH-T 96
Query: 127 AAIAEPRE--NDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSE 184
+++ + + G L G++ + G + QVS G H AL++
Sbjct: 97 VCLSKSGQVYSFGCNDEGAL---GRDTSVEGSEMVPGKVELQEKVVQVSAGDSHTAALTD 153
Query: 185 CGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELE-KITQVSCGEYHSAAV 243
G + WG + G+ GL P +K + +L+ + +V+ G H +
Sbjct: 154 DGRVFLWG--SFRD-NNGVI--GLLEP--MK--KSMVPVQVQLDVPVVKVASGNDHLVML 204
Query: 244 SENGEVYTWGLGSVGQLGHC--------SLQSGDKELLPRRVVALD-G----IFIKDVAC 290
+ +G++YT G G GQLG Q ++ L+P+ V+ G + +D C
Sbjct: 205 TADGDLYTLGCGEQGQLGRVPELFANRGGRQGLERLLVPKCVMLKSRGSRGHVRFQDAFC 264
Query: 291 GGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLV 350
G + A++ +G +Y +G S QLG P T S IP ++ T F+N V G
Sbjct: 265 GAYFTFAISHEGHVYGFGLSNYHQLGT-PGTES-CFIP-QNLTSFKNSTKSWV--GF--- 316
Query: 351 ACGHSHTLVYMRDGRIHGWGYNSYG-----QAANEKS 382
+ G HT+ +G+ + G YG + A EKS
Sbjct: 317 SGGQHHTVCMDSEGKAYSLGRAEYGRLGLGEGAEEKS 353
Score = 137 (53.3 bits), Expect = 3.6e-06, P = 3.6e-06
Identities = 67/239 (28%), Positives = 97/239 (40%)
Query: 234 SCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVA---C 290
SC H + +E G V T G G VGQLG G+ ++ R+ AL I +DV
Sbjct: 39 SCQVSHRSHSTEPGLVLTLGQGDVGQLG-----LGEN-VMERKKPALVSI-PEDVVQAEA 91
Query: 291 GGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLV 350
GG+H+ L+ G +Y++G + G LG ++P + + + V V
Sbjct: 92 GGMHTVCLSKSGQVYSFGCNDEGALGRDTSVEGSEMVPGKVE----------LQEKVVQV 141
Query: 351 ACGHSHTLVYMRDGRIHGWGY---NSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGH 407
+ G SHT DGR+ WG N+ E + P V V V K+A+G H
Sbjct: 142 SAGDSHTAALTDDGRVFLWGSFRDNNGVIGLLEPMKKSMVPVQVQLDVPVV-KVASGNDH 200
Query: 408 SAVL-ADACSLKELCEFRLAESVTLSNASEI-EDVASRTGSEAL-ARLCERLREHSLHG 463
+L AD +L E L E+ + R G E L C L+ G
Sbjct: 201 LVMLTADG----DLYTLGCGEQGQLGRVPELFANRGGRQGLERLLVPKCVMLKSRGSRG 255
Score = 115 (45.5 bits), Expect = 0.0010, P = 0.0010
Identities = 74/300 (24%), Positives = 116/300 (38%)
Query: 19 AKSA-IYVWGYNHSGQTGRKGR-ERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
+KS +Y +G N G GR E +P ++ EL + + ++ G HTAA
Sbjct: 100 SKSGQVYSFGCNDEGALGRDTSVEGSEMVPGKV--EL-------QEKVVQVSAGDSHTAA 150
Query: 77 VASDGTLFTWGA--NEFGQLGDGTEEGRKHPEKVK-QLQSEFVKSISCGAHCTAAIAEPR 133
+ DG +F WG+ + G +G E +K V+ QL VK S H A
Sbjct: 151 LTDDGRVFLWGSFRDNNGVIGL-LEPMKKSMVPVQVQLDVPVVKVASGNDHLVMLTA--- 206
Query: 134 ENDGTISTSRLWVWGQNQGSNFPRLFWGA---------FTPNTIICQ------------V 172
DG + T L Q Q P LF P ++ +
Sbjct: 207 --DGDLYT--LGCGEQGQLGRVPELFANRGGRQGLERLLVPKCVMLKSRGSRGHVRFQDA 262
Query: 173 SCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQ 232
CG+ A+S G + +G + Y QLG G + + + F + +
Sbjct: 263 FCGAYFTFAISHEGHVYGFGLSNYHQLGT----PGTESCFIPQNLTSFKNST---KSWVG 315
Query: 233 VSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKEL-LPRRVVALDGIFIKDVACG 291
S G++H+ + G+ Y+ G G+LG L G +E +P + L + VACG
Sbjct: 316 FSGGQHHTVCMDSEGKAYSLGRAEYGRLG---LGEGAEEKSIPTLISRLPAV--SSVACG 370
>RGD|1307558 [details] [associations]
symbol:Wbscr16 "Williams-Beuren syndrome chromosome region 16"
species:10116 "Rattus norvegicus" [GO:0005739 "mitochondrion"
evidence=IEA;ISO] RGD:1307558 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005739 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
EMBL:CH473973 PRINTS:PR00633 PROSITE:PS50012
GeneTree:ENSGT00700000104312 CTD:81554 OMA:MVTLAKS
OrthoDB:EOG4F1X33 IPI:IPI00189798 RefSeq:NP_001101802.1
UniGene:Rn.40552 Ensembl:ENSRNOT00000002032 GeneID:360796
KEGG:rno:360796 UCSC:RGD:1307558 NextBio:674123 Uniprot:D4AE90
Length = 461
Score = 215 (80.7 bits), Expect = 3.6e-15, Sum P(2) = 3.6e-15
Identities = 84/316 (26%), Positives = 135/316 (42%)
Query: 20 KSAIYVWGY--NHSGQTG----RKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEH 73
K VWG N Q G RK + R + P ++ L ++CG H
Sbjct: 123 KDVTKVWGMGLNKDSQLGFHRSRKDKTRGYEYVLEPSPVPLPLDRPQETKVLQVSCGRAH 182
Query: 74 TAAVASDGTLFTWGANEFGQLGDGTEEGRKHPE--KVKQLQSEF---VKSISCGAHCTAA 128
+ + +F+ G N GQ G E + E KV ++Q +F V + CG +
Sbjct: 183 SLVLTDREGVFSMGNNAHGQCGRKVVEDEVYSESHKVHRMQ-DFEGQVVQVVCGQDHSLF 241
Query: 129 IAEPRE--NDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECG 186
+ + E + G + + + N S P G T++ QV+ +ALS G
Sbjct: 242 LTDKGEVYSCGWGADGQTGLGHYNITST-PSKLGGDLAGVTVV-QVATYGDCCLALSADG 299
Query: 187 LLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSEN 246
+ WG +EY QL + PR + F + K+ QV+CG A ++E
Sbjct: 300 GVFGWGNSEYLQLASVTDSTQVNVPRCLP----FSG----VGKVKQVACGGTGCAILNEE 351
Query: 247 GEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDG----IFIKDVACGGVHSCALTSKG 302
G V+ WG G +G+ + S ++ E++P + L + + + CG H ALT+KG
Sbjct: 352 GHVFVWGYGILGKGPNLS-ETALPEMIPPTLFGLTEFNPEVKVSQIRCGLSHFAALTNKG 410
Query: 303 ALYAWGGSQAGQLGLG 318
L+ WG + G LG+G
Sbjct: 411 ELFVWGKNIRGCLGIG 426
Score = 198 (74.8 bits), Expect = 3.4e-13, Sum P(2) = 3.4e-13
Identities = 65/220 (29%), Positives = 104/220 (47%)
Query: 167 TIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPE 226
T + QVSCG H + L++ + + G N +GQ GR + + V K + +
Sbjct: 171 TKVLQVSCGRAHSLVLTDREGVFSMGNNAHGQCGRKVVED-----EVYSESHK-VHRMQD 224
Query: 227 LE-KITQVSCGEYHSAAVSENGEVYTWGLGSVGQ--LGHCSLQSGDKELLPRRVVALDGI 283
E ++ QV CG+ HS +++ GEVY+ G G+ GQ LGH ++ S +L L G+
Sbjct: 225 FEGQVVQVVCGQDHSLFLTDKGEVYSCGWGADGQTGLGHYNITSTPSKLGGD----LAGV 280
Query: 284 FIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVV 343
+ VA G AL++ G ++ WG S+ QL + + +P R +P V
Sbjct: 281 TVVQVATYGDCCLALSADGGVFGWGNSEYLQLASVTDSTQVN-VP-------RCLPFSGV 332
Query: 344 PNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKST 383
V+ VACG + + +G + WGY G+ N T
Sbjct: 333 GK-VKQVACGGTGCAILNEEGHVFVWGYGILGKGPNLSET 371
Score = 192 (72.6 bits), Expect = 1.7e-12, Sum P(2) = 1.7e-12
Identities = 77/285 (27%), Positives = 121/285 (42%)
Query: 20 KSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVAS 79
+ ++ G N GQ GRK E ++ + + + + CG +H+ +
Sbjct: 189 REGVFSMGNNAHGQCGRKVVEDEVYSESHKVHRM----QDFEGQVVQVVCGQDHSLFLTD 244
Query: 80 DGTLFT--WGANEFGQLGDGTEEGRKHPEKVK-QLQSEFVKSISCGAHCTAAIAEPREND 136
G +++ WGA+ GQ G G P K+ L V ++ C A++
Sbjct: 245 KGEVYSCGWGAD--GQTGLGHYNITSTPSKLGGDLAGVTVVQVATYGDCCLALSADGGVF 302
Query: 137 GTISTSRLWVWGQNQGS--NFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYN 194
G ++ L + + N PR F+ + QV+CG L+E G + WGY
Sbjct: 303 GWGNSEYLQLASVTDSTQVNVPRCL--PFSGVGKVKQVACGGTGCAILNEEGHVFVWGY- 359
Query: 195 EYGQLGRGITCEGLQGPRVIKGYAKFLDEA-PELEKITQVSCGEYHSAAVSENGEVYTWG 253
G LG+G P +I L E PE+ K++Q+ CG H AA++ GE++ WG
Sbjct: 360 --GILGKGPNLSETALPEMIPPTLFGLTEFNPEV-KVSQIRCGLSHFAALTNKGELFVWG 416
Query: 254 LGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCAL 298
G LG L+ + P RV + G + DVACG H L
Sbjct: 417 KNIRGCLGIGRLED---QYFPWRVT-MPGEPV-DVACGVDHMVTL 456
Score = 160 (61.4 bits), Expect = 7.1e-09, Sum P(2) = 7.1e-09
Identities = 67/247 (27%), Positives = 97/247 (39%)
Query: 169 ICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELE 228
+ QV CG H + L++ G + + G+ GQ G G P + G +L
Sbjct: 229 VVQVVCGQDHSLFLTDKGEVYSCGWGADGQTGLG-HYNITSTPSKLGG---------DLA 278
Query: 229 KITQVSCGEYHSA--AVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIF-I 285
+T V Y A+S +G V+ WG QL S+ + +PR + G+ +
Sbjct: 279 GVTVVQVATYGDCCLALSADGGVFGWGNSEYLQLA--SVTDSTQVNVPR-CLPFSGVGKV 335
Query: 286 KDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPN 345
K VACGG L +G ++ WG G LG GP +L T F +
Sbjct: 336 KQVACGGTGCAILNEEGHVFVWG---YGILGKGPNLSETALPEMIPPTLF-GLTEFNPEV 391
Query: 346 GVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGG 405
V + CG SH G + WG N G + ++P V GE +A G
Sbjct: 392 KVSQIRCGLSHFAALTNKGELFVWGKNIRGCLGIGRLEDQYFPWRVTM-PGEPVDVACGV 450
Query: 406 GHSAVLA 412
H LA
Sbjct: 451 DHMVTLA 457
Score = 46 (21.3 bits), Expect = 3.6e-15, Sum P(2) = 3.6e-15
Identities = 10/31 (32%), Positives = 16/31 (51%)
Query: 5 EIIGETARPVDNIPAKSAIYVWGYNHSGQTG 35
+ +GE A D + +VWG++ SG G
Sbjct: 46 QYVGERAARADRV------FVWGFSFSGALG 70
>UNIPROTKB|F1RNC5 [details] [associations]
symbol:NEK8 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0004674
"protein serine/threonine kinase activity" evidence=IEA]
InterPro:IPR000719 InterPro:IPR002290 InterPro:IPR008271
InterPro:IPR011009 InterPro:IPR017441 Pfam:PF00069 PROSITE:PS00107
PROSITE:PS00108 PROSITE:PS50011 SMART:SM00220 INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005524 SUPFAM:SSF56112 GO:GO:0004674
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS50012 GeneTree:ENSGT00700000104137
EMBL:FP016171 Ensembl:ENSSSCT00000019338 OMA:EPASHQQ Uniprot:F1RNC5
Length = 700
Score = 228 (85.3 bits), Expect = 4.6e-15, Sum P(2) = 4.6e-15
Identities = 84/303 (27%), Positives = 131/303 (43%)
Query: 67 IACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCT 126
+ACG TA + G + T+G+ G LG G+ P V+ L + ++CGA
Sbjct: 404 VACGDLFTACLTDRGIIMTFGSGSNGCLGHGSLNDISQPTIVEALLGYEMVQVACGASHV 463
Query: 127 AAIAEPREND--GTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSE 184
A++ RE G RL + G + P+L P +V CG + L+
Sbjct: 464 LALSTERELFAWGRGDGGRLGL-GTRESHCCPQLV--PMPPGQEAQRVVCGIDSSMILTV 520
Query: 185 CGLLQAWGYNEYGQLGRGITCEGLQ-GP-RVIKGYAKF--LDEAP-ELEKITQVSCGEYH 239
G A G N + +LG G + P + ++ F L AP + E + V G H
Sbjct: 521 PGQALACGSNRFNKLGLDPLSLGEEPAPHQQVEEAVTFTPLGSAPLDQEPLLSVDLGPAH 580
Query: 240 SAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALT 299
S ++ +G+ YT+G GQLG + P RV L GI I VACG + A+
Sbjct: 581 SLLLTASGDCYTFGSNQHGQLG---TNARRVSRAPCRVQGLQGIKISTVACGDAFTVAIG 637
Query: 300 SKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLV 359
++G +++WG G+LG + +T+ P V V+C H +TL+
Sbjct: 638 AEGEVFSWGKGARGRLGRKDEDAGLPRPVQLDETH---------PYTVTSVSCCHGNTLL 688
Query: 360 YMR 362
+R
Sbjct: 689 AVR 691
Score = 203 (76.5 bits), Expect = 3.1e-12, Sum P(2) = 3.1e-12
Identities = 65/227 (28%), Positives = 103/227 (45%)
Query: 166 NTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAP 225
NT + QV+ G ++ G L W G G + ++ P+ + ++FL E
Sbjct: 339 NTEVVQVAAGRTQKAGVTRSGRLILWEAPPLGAGGGALLPGAIEQPQP-QFVSRFL-EGQ 396
Query: 226 ELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFI 285
I V+CG+ +A +++ G + T+G GS G LGH SL + P V AL G +
Sbjct: 397 SGVTIKHVACGDLFTACLTDRGIIMTFGSGSNGCLGHGSLNDISQ---PTIVEALLGYEM 453
Query: 286 KDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPN 345
VACG H AL+++ L+AWG G+LGLG TR P ++ +P
Sbjct: 454 VQVACGASHVLALSTERELFAWGRGDGGRLGLG--TRESHCCPQ----------LVPMPP 501
Query: 346 G--VQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSP 390
G Q V CG +++ G+ G N + + + + P+P
Sbjct: 502 GQEAQRVVCGIDSSMILTVPGQALACGSNRFNKLGLDPLSLGEEPAP 548
Score = 180 (68.4 bits), Expect = 1.1e-09, Sum P(2) = 1.1e-09
Identities = 60/248 (24%), Positives = 105/248 (42%)
Query: 169 ICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELE 228
I V+CG + L++ G++ +G G LG G + + P +++ +
Sbjct: 401 IKHVACGDLFTACLTDRGIIMTFGSGSNGCLGHG-SLNDISQPTIVEALLGY-------- 451
Query: 229 KITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDV 288
++ QV+CG H A+S E++ WG G G+LG L + + P+ V G + V
Sbjct: 452 EMVQVACGASHVLALSTERELFAWGRGDGGRLG---LGTRESHCCPQLVPMPPGQEAQRV 508
Query: 289 ACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNES-DTYFRNIPILVVP--- 344
CG S LT G A G ++ +LGL P + P++ + P+ P
Sbjct: 509 VCGIDSSMILTVPGQALACGSNRFNKLGLDPLSLGEEPAPHQQVEEAVTFTPLGSAPLDQ 568
Query: 345 NGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAA 403
+ V G +H+L+ G + +G N +GQ + P V G ++ +A
Sbjct: 569 EPLLSVDLGPAHSLLLTASGDCYTFGSNQHGQLGTNARRVSRAPCRVQGLQGIKISTVAC 628
Query: 404 GGGHSAVL 411
G + +
Sbjct: 629 GDAFTVAI 636
Score = 177 (67.4 bits), Expect = 2.4e-09, Sum P(2) = 2.4e-09
Identities = 59/226 (26%), Positives = 99/226 (43%)
Query: 65 LDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAH 124
+ +ACG H A++++ LF WG + G+LG GT E P+ V + + + CG
Sbjct: 454 VQVACGASHVLALSTERELFAWGRGDGGRLGLGTRESHCCPQLVPMPPGQEAQRVVCGID 513
Query: 125 CTAAIAEPREN--DGTISTSRLWV----WGQNQGSNFPRLFWGAFTP-------NTIICQ 171
+ + P + G+ ++L + G+ + FTP +
Sbjct: 514 SSMILTVPGQALACGSNRFNKLGLDPLSLGEEPAPHQQVEEAVTFTPLGSAPLDQEPLLS 573
Query: 172 VSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKIT 231
V G H + L+ G +G N++GQLG + P ++G KI+
Sbjct: 574 VDLGPAHSLLLTASGDCYTFGSNQHGQLGTNARRVS-RAPCRVQGLQGI--------KIS 624
Query: 232 QVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRV 277
V+CG+ + A+ GEV++WG G+ G+LG +G LPR V
Sbjct: 625 TVACGDAFTVAIGAEGEVFSWGKGARGRLGRKDEDAG----LPRPV 666
Score = 38 (18.4 bits), Expect = 4.6e-15, Sum P(2) = 4.6e-15
Identities = 8/17 (47%), Positives = 10/17 (58%)
Query: 11 ARPVDNIPAKSAIYVWG 27
ARP P S++Y WG
Sbjct: 311 ARPAIP-PPLSSVYTWG 326
>DICTYBASE|DDB_G0282575 [details] [associations]
symbol:DDB_G0282575 "putative GTPase activating
protein (GAP)" species:44689 "Dictyostelium discoideum" [GO:0032851
"positive regulation of Rab GTPase activity" evidence=IEA]
[GO:0032313 "regulation of Rab GTPase activity" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005097 "Rab GTPase
activator activity" evidence=IEA] InterPro:IPR000195 Pfam:PF00566
PROSITE:PS50086 SMART:SM00164 dictyBase:DDB_G0282575
INTERPRO:IPR000408 Pfam:PF00415 EMBL:AAFI02000047 GO:GO:0005622
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 eggNOG:COG5210
GO:GO:0005097 GO:GO:0032851 SUPFAM:SSF47923 RefSeq:XP_640136.1
ProteinModelPortal:Q54SA3 EnsemblProtists:DDB0235329 GeneID:8623673
KEGG:ddi:DDB_G0282575 InParanoid:Q54SA3 OMA:NIVFRIW Uniprot:Q54SA3
Length = 1194
Score = 166 (63.5 bits), Expect = 2.6e-10, Sum P(2) = 2.6e-10
Identities = 40/103 (38%), Positives = 59/103 (57%)
Query: 223 EAPELEK--ITQVSCGEYHSAAVSENGEVYTWGLG-SVGQLGH--CSLQSGDKELLPR-- 275
E PEL K I Q+SCG H+ +S++G++Y+WG S GQLGH Q G + + +
Sbjct: 31 EVPELNKKNIVQLSCGSTHTLVLSDSGDLYSWGSSNSSGQLGHGDSKNQYGKPKNIKKFS 90
Query: 276 RVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLG 318
+ AL G + V+ G + LT +G++Y WG + GQL LG
Sbjct: 91 LIKALSGDSVIQVSTGLDFTFVLTDQGSIYNWGSNIEGQLALG 133
Score = 163 (62.4 bits), Expect = 4.7e-15, Sum P(3) = 4.7e-15
Identities = 49/148 (33%), Positives = 74/148 (50%)
Query: 166 NTI-ICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGL-QGPRVIKGYAKFLDE 223
N+I I Q+SCGS H++ALS+ + +WG E+G+LG G + Q PR I K
Sbjct: 367 NSIKIIQISCGSNHILALSDQYHVYSWGSAEHGKLGHGEDYSFVSQNPRWINSPKKIKSL 426
Query: 224 APELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGI 283
+ + VS G H A++ + + TWG GS GQLG +RV+ +
Sbjct: 427 QEKGVTVISVSSGYSHCMALTLDSGILTWGKGSDGQLGTGFRHDIWSPFEIKRVIDKNEK 486
Query: 284 FIKDVACGGVHSCALT-SKGALYAWGGS 310
++ + CG +S +T K LY +G S
Sbjct: 487 IVQ-ICCGYFNSFFITLEKRELYQFGWS 513
Score = 148 (57.2 bits), Expect = 2.0e-13, Sum P(2) = 2.0e-13
Identities = 40/126 (31%), Positives = 64/126 (50%)
Query: 140 STSRLWVWGQ--NQGSN--FPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGY-N 194
++ +++ WG+ NQG + I+ Q+SCGS H + LS+ G L +WG N
Sbjct: 8 NSKQIFYWGRGVNQGDKHIIEPIEVPELNKKNIV-QLSCGSTHTLVLSDSGDLYSWGSSN 66
Query: 195 EYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGL 254
GQLG G + P+ IK ++ L +A + + QVS G + +++ G +Y WG
Sbjct: 67 SSGQLGHGDSKNQYGKPKNIKKFS--LIKALSGDSVIQVSTGLDFTFVLTDQGSIYNWGS 124
Query: 255 GSVGQL 260
GQL
Sbjct: 125 NIEGQL 130
Score = 148 (57.2 bits), Expect = 2.1e-13, Sum P(3) = 2.1e-13
Identities = 37/113 (32%), Positives = 55/113 (48%)
Query: 213 VIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGH---CSLQSGD 269
VI + + + KI Q+SCG H A+S+ VY+WG G+LGH S S +
Sbjct: 354 VINNELQMMTDQMNSIKIIQISCGSNHILALSDQYHVYSWGSAEHGKLGHGEDYSFVSQN 413
Query: 270 KELL--PRRVVALD--GIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLG 318
+ P+++ +L G+ + V+ G H ALT + WG GQLG G
Sbjct: 414 PRWINSPKKIKSLQEKGVTVISVSSGYSHCMALTLDSGILTWGKGSDGQLGTG 466
Score = 141 (54.7 bits), Expect = 7.2e-06, P = 7.2e-06
Identities = 44/133 (33%), Positives = 61/133 (45%)
Query: 248 EVYTWGLGSVGQLGHCSLQSGDKELL-PRRVVALDGIFIKDVACGGVHSCALTSKGALYA 306
+++ WG G V Q GDK ++ P V L+ I ++CG H+ L+ G LY+
Sbjct: 11 QIFYWGRG-VNQ--------GDKHIIEPIEVPELNKKNIVQLSCGSTHTLVLSDSGDLYS 61
Query: 307 WGGSQA-GQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGR 365
WG S + GQLG G + N F I L + +Q V+ G T V G
Sbjct: 62 WGSSNSSGQLGHGDSKNQYGKPKNIKK--FSLIKALSGDSVIQ-VSTGLDFTFVLTDQGS 118
Query: 366 IHGWGYNSYGQAA 378
I+ WG N GQ A
Sbjct: 119 IYNWGSNIEGQLA 131
Score = 114 (45.2 bits), Expect = 2.0e-13, Sum P(2) = 2.0e-13
Identities = 49/201 (24%), Positives = 79/201 (39%)
Query: 280 LDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIP 339
++ I I ++CG H AL+ + +Y+WG ++ G+LG G S P ++ + I
Sbjct: 366 MNSIKIIQISCGSNHILALSDQYHVYSWGSAEHGKLGHGEDYSFVSQNPRWINSP-KKIK 424
Query: 340 ILVVPNGVQL--VACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE 397
L GV + V+ G+SH + D I WG S GQ W P + + +
Sbjct: 425 SLQ-EKGVTVISVSSGYSHCMALTLDSGILTWGKGSDGQLGTGFRHDIWSPFEIKRVIDK 483
Query: 398 VRKLAA-GGGHSAVLADACSLKELCEFRLAESVTLSNASEIEDVASRTGSEALARLCERL 456
K+ G+ +EL +F S+ L + +I L
Sbjct: 484 NEKIVQICCGYFNSFFITLEKRELYQF--GWSIPLGKSDDILIPTKFIWLNPLKNKNNNN 541
Query: 457 REHSLHGDEFDCDDDTRNGND 477
D+ D DD+ N ND
Sbjct: 542 ENEDKKDDDDDNDDEDEN-ND 561
Score = 112 (44.5 bits), Expect = 5.4e-08, Sum P(3) = 5.4e-08
Identities = 28/76 (36%), Positives = 39/76 (51%)
Query: 229 KITQVSCGEYHSAAVSENGEVYTWGLGSVGQLG----HCSLQSGDKELLPRRVVALDGIF 284
+I Q+S G H+ ++ENGE + G G GQLG H S+ P + AL F
Sbjct: 565 RIKQISSGYSHTLILNENGECLSIGQGEFGQLGIPLDHSSIDKDSFVNYPTVIPALLPYF 624
Query: 285 IKDVACGGVHSCALTS 300
++ V CG HS A+ S
Sbjct: 625 VESVQCGRWHSVAIVS 640
Score = 104 (41.7 bits), Expect = 5.4e-08, Sum P(3) = 5.4e-08
Identities = 37/132 (28%), Positives = 58/132 (43%)
Query: 65 LDIACGHEHTAAVASDGTLFTWGANEFGQLGDG------TEEGR--KHPEKVKQLQSEFV 116
+ I+CG H A++ +++WG+ E G+LG G ++ R P+K+K LQ + V
Sbjct: 372 IQISCGSNHILALSDQYHVYSWGSAEHGKLGHGEDYSFVSQNPRWINSPKKIKSLQEKGV 431
Query: 117 K--SISCG-AHCTAAIAEPRENDGTISTSRLWVWGQNQ----GSNFPRLFWGAFT----- 164
S+S G +HC A + S + WG+ G+ F W F
Sbjct: 432 TVISVSSGYSHCMALTLD----------SGILTWGKGSDGQLGTGFRHDIWSPFEIKRVI 481
Query: 165 -PNTIICQVSCG 175
N I Q+ CG
Sbjct: 482 DKNEKIVQICCG 493
Score = 100 (40.3 bits), Expect = 8.0e-10, Sum P(3) = 8.0e-10
Identities = 43/155 (27%), Positives = 72/155 (46%)
Query: 110 QLQSEFVKSISCGAHCTAAIAEPRE--NDGTISTSRLW------VWGQN-QGSNFPRLFW 160
Q+ S + ISCG++ A+++ + G+ +L QN + N P+
Sbjct: 365 QMNSIKIIQISCGSNHILALSDQYHVYSWGSAEHGKLGHGEDYSFVSQNPRWINSPKKIK 424
Query: 161 GAFTPNTIICQVSCGSVHVVALS-ECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAK 219
+ VS G H +AL+ + G+L WG GQLG G + + P IK +
Sbjct: 425 SLQEKGVTVISVSSGYSHCMALTLDSGIL-TWGKGSDGQLGTGFRHD-IWSPFEIK---R 479
Query: 220 FLDEAPELEKITQVSCGEYHSAAVS-ENGEVYTWG 253
+D+ EKI Q+ CG ++S ++ E E+Y +G
Sbjct: 480 VIDKN---EKIVQICCGYFNSFFITLEKRELYQFG 511
Score = 93 (37.8 bits), Expect = 4.7e-15, Sum P(3) = 4.7e-15
Identities = 18/58 (31%), Positives = 34/58 (58%)
Query: 65 LDIACGHEHTAAVASDGTLFTWGA-NEFGQLGDGTEEGRK-HPEKVKQLQSEFVKSIS 120
+ ++CG HT ++ G L++WG+ N GQLG G + + P+ +K+ +K++S
Sbjct: 41 VQLSCGSTHTLVLSDSGDLYSWGSSNSSGQLGHGDSKNQYGKPKNIKKFS--LIKALS 96
Score = 91 (37.1 bits), Expect = 7.5e-15, Sum P(3) = 7.5e-15
Identities = 24/86 (27%), Positives = 39/86 (45%)
Query: 23 IYVWGY-NHSGQTGRKGRERQLRIPKQLPP-ELFGCPAGANSRWLDIACGHEHTAAVASD 80
+Y WG N SGQ G + Q PK + L +G + + ++ G + T +
Sbjct: 59 LYSWGSSNSSGQLGHGDSKNQYGKPKNIKKFSLIKALSGDSV--IQVSTGLDFTFVLTDQ 116
Query: 81 GTLFTWGANEFGQLGDGTEEGRKHPE 106
G+++ WG+N GQL G + E
Sbjct: 117 GSIYNWGSNIEGQLALGQPVNKNEKE 142
Score = 82 (33.9 bits), Expect = 2.7e-12, Sum P(3) = 2.7e-12
Identities = 34/119 (28%), Positives = 58/119 (48%)
Query: 95 GDGTEEGRKH---PEKVKQLQSEFVKSISCGAHCTAAIAEPRE--NDGTISTSRLWVWG- 148
G G +G KH P +V +L + + +SCG+ T +++ + + G+ ++S G
Sbjct: 16 GRGVNQGDKHIIEPIEVPELNKKNIVQLSCGSTHTLVLSDSGDLYSWGSSNSSGQLGHGD 75
Query: 149 -QNQ-GS--NFPRL-FWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRG 202
+NQ G N + A + +++I QVS G L++ G + WG N GQL G
Sbjct: 76 SKNQYGKPKNIKKFSLIKALSGDSVI-QVSTGLDFTFVLTDQGSIYNWGSNIEGQLALG 133
Score = 81 (33.6 bits), Expect = 8.0e-10, Sum P(3) = 8.0e-10
Identities = 29/85 (34%), Positives = 41/85 (48%)
Query: 285 IKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVP 344
IK ++ G H+ L G + G + GQLG+ P S S+ + Y IP L+ P
Sbjct: 566 IKQISSGYSHTLILNENGECLSIGQGEFGQLGI-PLDHS-SIDKDSFVNYPTVIPALL-P 622
Query: 345 NGVQLVACG--HSHTLVYMRDGRIH 367
V+ V CG HS +V R+ R H
Sbjct: 623 YFVESVQCGRWHSVAIVSNRNLRDH 647
Score = 79 (32.9 bits), Expect = 0.00012, Sum P(3) = 0.00012
Identities = 23/79 (29%), Positives = 35/79 (44%)
Query: 169 ICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEA-PEL 227
I Q+S G H + L+E G + G E+GQLG + + + Y + P
Sbjct: 566 IKQISSGYSHTLILNENGECLSIGQGEFGQLGIPLDHSSIDKDSFVN-YPTVIPALLPYF 624
Query: 228 EKITQVSCGEYHSAAVSEN 246
+ V CG +HS A+ N
Sbjct: 625 --VESVQCGRWHSVAIVSN 641
Score = 65 (27.9 bits), Expect = 4.7e-15, Sum P(3) = 4.7e-15
Identities = 18/83 (21%), Positives = 39/83 (46%)
Query: 345 NGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQ-------AANEKSTYAWYPSPVDWCVGE 397
N ++ ++ G+SHTL+ +G G +GQ ++ +K ++ YP+ + +
Sbjct: 564 NRIKQISSGYSHTLILNENGECLSIGQGEFGQLGIPLDHSSIDKDSFVNYPTVIPALLPY 623
Query: 398 -VRKLAAGGGHSAVLADACSLKE 419
V + G HS + +L++
Sbjct: 624 FVESVQCGRWHSVAIVSNRNLRD 646
Score = 39 (18.8 bits), Expect = 1.4e-09, Sum P(3) = 1.4e-09
Identities = 7/14 (50%), Positives = 9/14 (64%)
Query: 20 KSAIYVWGYNHSGQ 33
+ +IY WG N GQ
Sbjct: 116 QGSIYNWGSNIEGQ 129
>UNIPROTKB|Q96I51 [details] [associations]
symbol:WBSCR16 "Williams-Beuren syndrome chromosomal region
16 protein" species:9606 "Homo sapiens" [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
[GO:0005575 "cellular_component" evidence=ND] INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005739 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626
PROSITE:PS50012 eggNOG:COG5184 Orphanet:904 MIM:194050
EMBL:AF410455 EMBL:AL136804 EMBL:CH471292 EMBL:BC007823
EMBL:BC019008 IPI:IPI00305992 RefSeq:NP_110425.1 UniGene:Hs.723684
ProteinModelPortal:Q96I51 SMR:Q96I51 IntAct:Q96I51 STRING:Q96I51
PhosphoSite:Q96I51 DMDM:116242843 PaxDb:Q96I51 PeptideAtlas:Q96I51
PRIDE:Q96I51 DNASU:81554 Ensembl:ENST00000329959 GeneID:81554
KEGG:hsa:81554 UCSC:uc003ubr.3 CTD:81554 GeneCards:GC07M074456
HGNC:HGNC:14948 neXtProt:NX_Q96I51 PharmGKB:PA37941
HOGENOM:HOG000232125 HOVERGEN:HBG054246 InParanoid:Q96I51
OMA:MVTLAKS OrthoDB:EOG4F1X33 PhylomeDB:Q96I51 ChiTaRS:WBSCR16
GenomeRNAi:81554 NextBio:71806 ArrayExpress:Q96I51 Bgee:Q96I51
CleanEx:HS_WBSCR16 Genevestigator:Q96I51 GermOnline:ENSG00000174374
Uniprot:Q96I51
Length = 464
Score = 214 (80.4 bits), Expect = 4.9e-15, Sum P(2) = 4.9e-15
Identities = 83/311 (26%), Positives = 136/311 (43%)
Query: 25 VWGY--NHSGQTG-RKGRERQLR-IPKQLPPELFGCPAGA--NSRWLDIACGHEHTAAVA 78
VWG N Q G + R+ + R L P P +R L ++CG H+ +
Sbjct: 131 VWGMGLNKDSQLGFHRSRKDKTRGYEYVLEPSPVSLPLDRPQETRVLQVSCGRAHSLVLT 190
Query: 79 SDGTLFTWGANEFGQLGDGTEEGRKHPE--KVKQLQSEF---VKSISCGAHCTAAIAEPR 133
+F+ G N +GQ G E + E +V ++Q +F V ++CG + + +
Sbjct: 191 DREGVFSMGNNSYGQCGRKVVENEIYSESHRVHRMQ-DFDGQVVQVACGQDHSLFLTDKG 249
Query: 134 E--NDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAW 191
E + G + + + N S+ +L G + QV+ +A+S G L W
Sbjct: 250 EVYSCGWGADGQTGLGHYNITSSPTKL--GGDLAGVNVIQVATYGDCCLAVSADGGLFGW 307
Query: 192 GYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYT 251
G +EY QL + PR + F + K+ Q +CG A ++ G V+
Sbjct: 308 GNSEYLQLASVTDSTQVNVPRCLH----FSG----VGKVRQAACGGTGCAVLNGEGHVFV 359
Query: 252 WGLGSVGQLGHCSLQSGDKELLPRRVVALDG----IFIKDVACGGVHSCALTSKGALYAW 307
WG G +G+ G ++S E++P + L I + + CG H ALT+KG L+ W
Sbjct: 360 WGYGILGK-GPNLVESAVPEMIPPTLFGLTEFNPEIQVSRIRCGLSHFAALTNKGELFVW 418
Query: 308 GGSQAGQLGLG 318
G + G LG+G
Sbjct: 419 GKNIRGCLGIG 429
Score = 193 (73.0 bits), Expect = 1.3e-12, Sum P(2) = 1.3e-12
Identities = 61/216 (28%), Positives = 101/216 (46%)
Query: 167 TIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPE 226
T + QVSCG H + L++ + + G N YGQ GR + I + + +
Sbjct: 174 TRVLQVSCGRAHSLVLTDREGVFSMGNNSYGQCGRKVV------ENEIYSESHRVHRMQD 227
Query: 227 LE-KITQVSCGEYHSAAVSENGEVYTWGLGSVGQ--LGHCSLQSGDKELLPRRVVALDGI 283
+ ++ QV+CG+ HS +++ GEVY+ G G+ GQ LGH ++ S +L L G+
Sbjct: 228 FDGQVVQVACGQDHSLFLTDKGEVYSCGWGADGQTGLGHYNITSSPTKLGGD----LAGV 283
Query: 284 FIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVV 343
+ VA G A+++ G L+ WG S+ QL + + +P +F +
Sbjct: 284 NVIQVATYGDCCLAVSADGGLFGWGNSEYLQLASVTDSTQVN-VPR--CLHFSGV----- 335
Query: 344 PNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAAN 379
V+ ACG + V +G + WGY G+ N
Sbjct: 336 -GKVRQAACGGTGCAVLNGEGHVFVWGYGILGKGPN 370
Score = 190 (71.9 bits), Expect = 2.9e-12, Sum P(2) = 2.9e-12
Identities = 76/254 (29%), Positives = 111/254 (43%)
Query: 169 ICQVSCGSVHVVALSECG-LLQAWGY--NEYGQLG----RGITCEGLQGPRVIKGYAKFL 221
I +CG + S+ + + WG N+ QLG R G + + L
Sbjct: 109 ISSAACGYGFTLLSSKTADVTKVWGMGLNKDSQLGFHRSRKDKTRGYEYVLEPSPVSLPL 168
Query: 222 DEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSG--DKELLPRRVVA 279
D P+ ++ QVSCG HS +++ V++ G S GQ G +++ + R+
Sbjct: 169 DR-PQETRVLQVSCGRAHSLVLTDREGVFSMGNNSYGQCGRKVVENEIYSESHRVHRMQD 227
Query: 280 LDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIP 339
DG ++ VACG HS LT KG +Y+ G GQ GLG + S D
Sbjct: 228 FDGQVVQ-VACGQDHSLFLTDKGEVYSCGWGADGQTGLGHYNITSSPTKLGGD------- 279
Query: 340 ILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAAN-EKSTYAWYPSPVDWC-VGE 397
L N +Q+ G L DG + GWG + Y Q A+ ST P + + VG+
Sbjct: 280 -LAGVNVIQVATYGDC-CLAVSADGGLFGWGNSEYLQLASVTDSTQVNVPRCLHFSGVGK 337
Query: 398 VRKLAAGGGHSAVL 411
VR+ A GG AVL
Sbjct: 338 VRQAACGGTGCAVL 351
Score = 180 (68.4 bits), Expect = 4.0e-11, Sum P(2) = 4.0e-11
Identities = 74/285 (25%), Positives = 121/285 (42%)
Query: 20 KSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVAS 79
+ ++ G N GQ GRK E ++ + + + + +ACG +H+ +
Sbjct: 192 REGVFSMGNNSYGQCGRKVVENEIYSESHRVHRM----QDFDGQVVQVACGQDHSLFLTD 247
Query: 80 DGTLFT--WGANEFGQLGDGTEEGRKHPEKVK-QLQSEFVKSISCGAHCTAAIAEPREND 136
G +++ WGA+ GQ G G P K+ L V ++ C A++
Sbjct: 248 KGEVYSCGWGAD--GQTGLGHYNITSSPTKLGGDLAGVNVIQVATYGDCCLAVSADGGLF 305
Query: 137 GTISTSRLWVWGQNQGS--NFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYN 194
G ++ L + + N PR F+ + Q +CG L+ G + WGY
Sbjct: 306 GWGNSEYLQLASVTDSTQVNVPRCLH--FSGVGKVRQAACGGTGCAVLNGEGHVFVWGY- 362
Query: 195 EYGQLGRGITCEGLQGPRVIKGYAKFLDEA-PELEKITQVSCGEYHSAAVSENGEVYTWG 253
G LG+G P +I L E PE++ ++++ CG H AA++ GE++ WG
Sbjct: 363 --GILGKGPNLVESAVPEMIPPTLFGLTEFNPEIQ-VSRIRCGLSHFAALTNKGELFVWG 419
Query: 254 LGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCAL 298
G LG L+ + P RV + G + DVACG H L
Sbjct: 420 KNIRGCLGIGRLED---QYFPWRVT-MPGEPV-DVACGVDHMVTL 459
Score = 134 (52.2 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 36/110 (32%), Positives = 53/110 (48%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPA-GANSRWLDIACGHEHTAAVASDG 81
++VWGY G G+ + +P+ +PP LFG + I CG H AA+ + G
Sbjct: 357 VFVWGY---GILGKGPNLVESAVPEMIPPTLFGLTEFNPEIQVSRIRCGLSHFAALTNKG 413
Query: 82 TLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAE 131
LF WG N G LG G E + P +V + E V ++CG +A+
Sbjct: 414 ELFVWGKNIRGCLGIGRLEDQYFPWRVT-MPGEPV-DVACGVDHMVTLAK 461
Score = 46 (21.3 bits), Expect = 4.9e-15, Sum P(2) = 4.9e-15
Identities = 10/31 (32%), Positives = 16/31 (51%)
Query: 5 EIIGETARPVDNIPAKSAIYVWGYNHSGQTG 35
+ +GE A D + +VWG++ SG G
Sbjct: 49 QYVGERAARADRV------FVWGFSFSGALG 73
>DICTYBASE|DDB_G0284187 [details] [associations]
symbol:Dd5P2 "inositol 5-phosphatase" species:44689
"Dictyostelium discoideum" [GO:0046856 "phosphatidylinositol
dephosphorylation" evidence=IDA] [GO:0046855 "inositol phosphate
dephosphorylation" evidence=IDA] [GO:0034485
"phosphatidylinositol-3,4,5-trisphosphate 5-phosphatase activity"
evidence=IDA] [GO:0004445 "inositol-polyphosphate 5-phosphatase
activity" evidence=IDA] [GO:0004439
"phosphatidylinositol-4,5-bisphosphate 5-phosphatase activity"
evidence=IDA] [GO:0046854 "phosphatidylinositol phosphorylation"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
InterPro:IPR000300 SMART:SM00128 dictyBase:DDB_G0284187
INTERPRO:IPR000408 Pfam:PF00415 GenomeReviews:CM000153_GR
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 InterPro:IPR005135
SUPFAM:SSF56219 EMBL:AAFI02000064 GO:GO:0046854 GO:GO:0046855
GO:GO:0004439 GO:GO:0046856 GO:GO:0004445 eggNOG:COG5411
GO:GO:0034485 RefSeq:XP_638694.1 ProteinModelPortal:Q54PV1
EnsemblProtists:DDB0191414 GeneID:8624525 KEGG:ddi:DDB_G0284187
InParanoid:Q54PV1 OMA:SHEKMER Uniprot:Q54PV1
Length = 1800
Score = 227 (85.0 bits), Expect = 4.9e-15, P = 4.9e-15
Identities = 87/336 (25%), Positives = 144/336 (42%)
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
L+TWG + G + +K+P L S + +S G + +AAI N+ +
Sbjct: 4 LYTWGKGKTGNTCHNID--KKYPSPPSVLISLNLDQLSMGPNHSAAIV----NNECL--- 54
Query: 143 RLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRG 202
+WG+ G LF + + VSCG H + L+ + + G+N+ GQLG
Sbjct: 55 ---MWGEVMGRKHTTLFKIVWKRRVV--SVSCGFNHTLLLTSEYKIFSMGFNQTGQLGIE 109
Query: 203 ITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGH 262
+ P + +KF + ++ G SAA++E G++Y WG + GQLG+
Sbjct: 110 NVVDSAV-PLPVDTLSKF--------NVIKIKAGNNVSAAITEAGDLYCWGSSAYGQLGN 160
Query: 263 CSLQSGDKELLPRRVV-AL-------DGIF----IKDVACGGVHSCALTSKGALYAWGGS 310
+ + P ++ L D I+ ++ G H+ A+++ GA+++WG +
Sbjct: 161 GKMNAKLHSFTPTTILNPLIPDAEKDDPIYQNLQYTNICFGAQHTIAISTTGAIFSWGSN 220
Query: 311 QAGQLGLGPQTRSFSLIPNESDTYFR----NIPIL--VVPNG---------VQLVACGHS 355
Q GQLGLG +P D F +I L +V V +ACG+
Sbjct: 221 QYGQLGLGHCNAKLVPVPIHLDNSFERRAGHINSLGEIVTTDFTAKTIHRIVVDIACGNF 280
Query: 356 HTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPV 391
H+ + +G + WG N YGQ S P V
Sbjct: 281 HSALLTLEGDLFLWGSNQYGQLGQGDSLDQSVPKTV 316
Score = 169 (64.5 bits), Expect = 5.0e-13, Sum P(2) = 5.0e-13
Identities = 50/162 (30%), Positives = 81/162 (50%)
Query: 175 GSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIK---------GYAKFLDE-- 223
G+ H +A+S G + +WG N+YGQLG G C P I G+ L E
Sbjct: 201 GAQHTIAISTTGAIFSWGSNQYGQLGLG-HCNAKLVPVPIHLDNSFERRAGHINSLGEIV 259
Query: 224 -----APELEKIT-QVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRV 277
A + +I ++CG +HSA ++ G+++ WG GQLG S D+ + P+ V
Sbjct: 260 TTDFTAKTIHRIVVDIACGNFHSALLTLEGDLFLWGSNQYGQLGQGD--SLDQSV-PKTV 316
Query: 278 V-ALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLG 318
+L+ + I +A G H+ LT + ++ +G ++ QLG G
Sbjct: 317 KGSLEFVKINRMALGNNHTILLTKEQDVFTFGSNEFYQLGHG 358
Score = 152 (58.6 bits), Expect = 2.4e-13, Sum P(2) = 2.4e-13
Identities = 35/116 (30%), Positives = 64/116 (55%)
Query: 162 AFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFL 221
A T + I+ ++CG+ H L+ G L WG N+YGQLG+G + + P+ +KG +F+
Sbjct: 265 AKTIHRIVVDIACGNFHSALLTLEGDLFLWGSNQYGQLGQGDSLDQ-SVPKTVKGSLEFV 323
Query: 222 DEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRV 277
KI +++ G H+ +++ +V+T+G QLGH S+ ++ P ++
Sbjct: 324 -------KINRMALGNNHTILLTKEQDVFTFGSNEFYQLGHGSIGGKNRLYFPTQI 372
Score = 133 (51.9 bits), Expect = 2.1e-11, Sum P(2) = 2.1e-11
Identities = 49/160 (30%), Positives = 71/160 (44%)
Query: 63 RWLDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCG 122
R + ++CG HT + S+ +F+ G N+ GQLG P V L V I G
Sbjct: 75 RVVSVSCGFNHTLLLTSEYKIFSMGFNQTGQLGIENVVDSAVPLPVDTLSKFNVIKIKAG 134
Query: 123 AHCTAAIAEPRENDGTISTSRLWVWGQ-NQGSNFPRLFWGAFTPNTII------------ 169
+ +AAI E G + +GQ G +L +FTP TI+
Sbjct: 135 NNVSAAITEA----GDLYCWGSSAYGQLGNGKMNAKLH--SFTPTTILNPLIPDAEKDDP 188
Query: 170 ----CQVS--C-GSVHVVALSECGLLQAWGYNEYGQLGRG 202
Q + C G+ H +A+S G + +WG N+YGQLG G
Sbjct: 189 IYQNLQYTNICFGAQHTIAISTTGAIFSWGSNQYGQLGLG 228
Score = 128 (50.1 bits), Expect = 0.00070, Sum P(2) = 0.00070
Identities = 33/99 (33%), Positives = 53/99 (53%)
Query: 65 LDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVK--SISCG 122
+DIACG+ H+A + +G LF WG+N++GQLG G + P+ VK EFVK ++ G
Sbjct: 273 VDIACGNFHSALLTLEGDLFLWGSNQYGQLGQGDSLDQSVPKTVKG-SLEFVKINRMALG 331
Query: 123 AHCTAAIAEPRENDG-TISTSRLWVWGQNQGSNFPRLFW 160
+ T + +E D T ++ + G RL++
Sbjct: 332 NNHTILLT--KEQDVFTFGSNEFYQLGHGSIGGKNRLYF 368
Score = 114 (45.2 bits), Expect = 2.1e-11, Sum P(2) = 2.1e-11
Identities = 28/92 (30%), Positives = 48/92 (52%)
Query: 285 IKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVP 344
+ D+ACG HS LT +G L+ WG +Q GQLG G SL + T ++ + +
Sbjct: 272 VVDIACGNFHSALLTLEGDLFLWGSNQYGQLGQGD-----SLDQSVPKTVKGSLEFVKIN 326
Query: 345 NGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQ 376
+A G++HT++ ++ + +G N + Q
Sbjct: 327 R----MALGNNHTILLTKEQDVFTFGSNEFYQ 354
Score = 113 (44.8 bits), Expect = 2.4e-13, Sum P(2) = 2.4e-13
Identities = 27/82 (32%), Positives = 43/82 (52%)
Query: 23 IYVWGYNHSGQTGRKGRERQLR------IPKQLPPELF-GCPAGANSRWLDIACGHEHTA 75
+Y WG + GQ G +L I L P+ P N ++ +I G +HT
Sbjct: 147 LYCWGSSAYGQLGNGKMNAKLHSFTPTTILNPLIPDAEKDDPIYQNLQYTNICFGAQHTI 206
Query: 76 AVASDGTLFTWGANEFGQLGDG 97
A+++ G +F+WG+N++GQLG G
Sbjct: 207 AISTTGAIFSWGSNQYGQLGLG 228
Score = 92 (37.4 bits), Expect = 5.0e-13, Sum P(2) = 5.0e-13
Identities = 24/82 (29%), Positives = 40/82 (48%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
I+ G+N QTG+ G E + LP + + + I G+ +AA+ G
Sbjct: 95 IFSMGFN---QTGQLGIENVVDSAVPLPVDTL-----SKFNVIKIKAGNNVSAAITEAGD 146
Query: 83 LFTWGANEFGQLGDGTEEGRKH 104
L+ WG++ +GQLG+G + H
Sbjct: 147 LYCWGSSAYGQLGNGKMNAKLH 168
Score = 50 (22.7 bits), Expect = 7.5e-07, Sum P(2) = 7.5e-07
Identities = 19/66 (28%), Positives = 29/66 (43%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLD-IACGHEHTAAVASDG 81
+Y WG G+TG + P PP + N LD ++ G H+AA+ ++
Sbjct: 4 LYTWG---KGKTGNTCHNIDKKYPS--PPSVL---ISLN---LDQLSMGPNHSAAIVNNE 52
Query: 82 TLFTWG 87
L WG
Sbjct: 53 CLM-WG 57
Score = 46 (21.3 bits), Expect = 1.9e-06, Sum P(2) = 1.9e-06
Identities = 9/19 (47%), Positives = 10/19 (52%)
Query: 17 IPAKSAIYVWGYNHSGQTG 35
I AI+ WG N GQ G
Sbjct: 208 ISTTGAIFSWGSNQYGQLG 226
>TAIR|locus:2205794 [details] [associations]
symbol:AT1G27060 species:3702 "Arabidopsis thaliana"
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] [GO:0008536 "Ran GTPase binding"
evidence=ISS] INTERPRO:IPR000408 Pfam:PF00415 EMBL:CP002684
GenomeReviews:CT485782_GR Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012
eggNOG:COG5184 EMBL:BT030023 IPI:IPI00535833 RefSeq:NP_174026.1
UniGene:At.41142 UniGene:At.50938 ProteinModelPortal:A2RVN2
SMR:A2RVN2 DNASU:839595 EnsemblPlants:AT1G27060.1 GeneID:839595
KEGG:ath:AT1G27060 TAIR:At1g27060 HOGENOM:HOG000236375
InParanoid:A2RVN2 OMA:GYIYAWG PhylomeDB:A2RVN2
ProtClustDB:CLSN2682864 Genevestigator:A2RVN2 Uniprot:A2RVN2
Length = 386
Score = 215 (80.7 bits), Expect = 6.3e-15, P = 6.3e-15
Identities = 70/226 (30%), Positives = 106/226 (46%)
Query: 190 AWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEV 249
+WG GQLG + L P+++ L P I+ ++CG H A++ G+V
Sbjct: 19 SWGAGTDGQLGTTKLQDELL-PQLLS-----LTSLPS---ISMLACGGAHVIALTSGGKV 69
Query: 250 YTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGG 309
+TWG GS GQLGH + + LP+ V D I A G HS ++ G ++ G
Sbjct: 70 FTWGRGSSGQLGHGDILN---ITLPKLVSFFDDSVITQAAAGWSHSGFVSDSGCIFTCGN 126
Query: 310 SQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGW 369
GQLG G T S S S +F N + V++VACG H+LV ++ G+
Sbjct: 127 GSFGQLGHG-DTLSLSTPAKVS--HFNN-------DSVKMVACGMRHSLVLFAGNQVCGF 176
Query: 370 GYNSYGQA--ANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLA 412
G GQ ++++ P V EV +++A G HSA ++
Sbjct: 177 GSGKRGQLGFSSDRIKSVNLPCVVSGLKDVEVVRISANGDHSAAIS 222
Score = 205 (77.2 bits), Expect = 9.0e-14, P = 9.0e-14
Identities = 80/255 (31%), Positives = 111/255 (43%)
Query: 68 ACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTA 127
A G H+ V+ G +FT G FGQLG G P KV ++ VK ++CG +
Sbjct: 106 AAGWSHSGFVSDSGCIFTCGNGSFGQLGHGDTLSLSTPAKVSHFNNDSVKMVACGMRHSL 165
Query: 128 AIAEPRENDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVS-CGSVHVVALSECG 186
+ + G S R GQ G + R+ + N + C VS V VV +S G
Sbjct: 166 VLFAGNQVCGFGSGKR----GQ-LGFSSDRIK----SVN-LPCVVSGLKDVEVVRISANG 215
Query: 187 LLQAWGYNEYGQL---GRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAV 243
A + GQ GRG C G GP V +A P +V+ G H+ +
Sbjct: 216 DHSA-AISADGQFFSWGRGF-C-G--GPDV---HAP--QSLPSPLSFREVAVGWNHALLL 265
Query: 244 SENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGA 303
+ +GEV+ G Q LQ E L +V DG+ + +A G HS A+T G
Sbjct: 266 TVDGEVFKLGSTLNKQPEKQQLQIDSSEALFEKVPDFDGVKVMQIAAGAEHSAAVTENGE 325
Query: 304 LYAWGGSQAGQLGLG 318
+ WG + GQLGLG
Sbjct: 326 VKTWGWGEHGQLGLG 340
Score = 168 (64.2 bits), Expect = 1.4e-09, P = 1.4e-09
Identities = 58/169 (34%), Positives = 85/169 (50%)
Query: 245 ENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGI-FIKDVACGGVHSCALTSKGA 303
E +V++WG G+ GQLG LQ ELLP+ +++L + I +ACGG H ALTS G
Sbjct: 13 EEEQVWSWGAGTDGQLGTTKLQD---ELLPQ-LLSLTSLPSISMLACGGAHVIALTSGGK 68
Query: 304 LYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRD 363
++ WG +GQLG G + +L P + ++F + I Q A G SH+
Sbjct: 69 VFTWGRGSSGQLGHG-DILNITL-P-KLVSFFDDSVI------TQ-AAAGWSHSGFVSDS 118
Query: 364 GRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVL 411
G I G S+GQ + + P+ V + V+ +A G HS VL
Sbjct: 119 GCIFTCGNGSFGQLGHGDTLSLSTPAKVSHFNNDSVKMVACGMRHSLVL 167
Score = 160 (61.4 bits), Expect = 2.0e-13, Sum P(2) = 2.0e-13
Identities = 62/240 (25%), Positives = 101/240 (42%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ WG GQ G + +L +P+ L L P+ + +ACG H A+ S G
Sbjct: 17 VWSWGAGTDGQLGTTKLQDEL-LPQLL--SLTSLPSISM-----LACGGAHVIALTSGGK 68
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
+FTWG GQLG G P+ V + + G + +++ G I T
Sbjct: 69 VFTWGRGSSGQLGHGDILNITLPKLVSFFDDSVITQAAAGWSHSGFVSD----SGCIFTC 124
Query: 143 RLWVWGQNQGSNFPRLFWGAFTP---NTIICQVSCGSVHVVALSECGLLQAWGYNEYGQL 199
+GQ + L A N + V+CG H + L + +G + GQL
Sbjct: 125 GNGSFGQLGHGDTLSLSTPAKVSHFNNDSVKMVACGMRHSLVLFAGNQVCGFGSGKRGQL 184
Query: 200 G-RGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVG 258
G + + P V+ G ++E + ++S HSAA+S +G+ ++WG G G
Sbjct: 185 GFSSDRIKSVNLPCVVSGLK-------DVE-VVRISANGDHSAAISADGQFFSWGRGFCG 236
Score = 135 (52.6 bits), Expect = 6.5e-06, P = 6.5e-06
Identities = 51/195 (26%), Positives = 83/195 (42%)
Query: 228 EKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKD 287
+ + V+CG HS + +V +G G GQLG S + L P V L + +
Sbjct: 152 DSVKMVACGMRHSLVLFAGNQVCGFGSGKRGQLGFSSDRIKSVNL-PCVVSGLKDVEVVR 210
Query: 288 VACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGV 347
++ G HS A+++ G ++WG G GP + +P S FR
Sbjct: 211 ISANGDHSAAISADGQFFSWGRGFCG----GPDVHAPQSLP--SPLSFRE---------- 254
Query: 348 QLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEK----STYAWYPSPVDWCVGEVRKLAA 403
VA G +H L+ DG + G Q ++ S+ A + D+ +V ++AA
Sbjct: 255 --VAVGWNHALLLTVDGEVFKLGSTLNKQPEKQQLQIDSSEALFEKVPDFDGVKVMQIAA 312
Query: 404 GGGHSAVLADACSLK 418
G HSA + + +K
Sbjct: 313 GAEHSAAVTENGEVK 327
Score = 119 (46.9 bits), Expect = 0.00038, P = 0.00038
Identities = 40/115 (34%), Positives = 56/115 (48%)
Query: 32 GQTGRKGRERQ-LRIPKQLPPELFG-CPAGANSRWLDIACGHEHTAAVASDGTLFTWGAN 89
G T K E+Q L+I LF P + + IA G EH+AAV +G + TWG
Sbjct: 275 GSTLNKQPEKQQLQIDSS--EALFEKVPDFDGVKVMQIAAGAEHSAAVTENGEVKTWGWG 332
Query: 90 EFGQLGDGTEEGRKHPEKVK----QLQSEFVKSISCGAHCTAAIAEPRENDGTIS 140
E GQLG G + PE V L+++ +K + CG+ T A+ +E T S
Sbjct: 333 EHGQLGLGNTNDQTSPELVSLGSIDLRTKEIK-VYCGSGFTYAVKRKQELSPTSS 386
Score = 87 (35.7 bits), Expect = 2.0e-13, Sum P(2) = 2.0e-13
Identities = 23/93 (24%), Positives = 44/93 (47%)
Query: 286 KDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPN 345
++VA G H+ LT G ++ G + L P+ + + + S+ F +P +
Sbjct: 253 REVAVGWNHALLLTVDGEVFKLGST----LNKQPEKQQLQI--DSSEALFEKVPDF---D 303
Query: 346 GVQL--VACGHSHTLVYMRDGRIHGWGYNSYGQ 376
GV++ +A G H+ +G + WG+ +GQ
Sbjct: 304 GVKVMQIAAGAEHSAAVTENGEVKTWGWGEHGQ 336
>UNIPROTKB|C9JRH2 [details] [associations]
symbol:RCC1 "Regulator of chromosome condensation"
species:9606 "Homo sapiens" [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0031965 "nuclear
membrane" evidence=IDA] INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0031965 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
EMBL:AL513497 HGNC:HGNC:1913 HOGENOM:HOG000234341 OrthoDB:EOG4320Z9
IPI:IPI00927389 ProteinModelPortal:C9JRH2 SMR:C9JRH2 STRING:C9JRH2
Ensembl:ENST00000427469 ArrayExpress:C9JRH2 Bgee:C9JRH2
Uniprot:C9JRH2
Length = 230
Score = 195 (73.7 bits), Expect = 1.0e-14, P = 1.0e-14
Identities = 54/158 (34%), Positives = 85/158 (53%)
Query: 165 PNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEA 224
P ++ Q G +H V LS+ G + ++G N+ G LGR + EG + ++ G +
Sbjct: 66 PEDVV-QAEAGGMHTVCLSKSGQVYSFGCNDEGALGRDTSVEGSE---MVPGKVELQ--- 118
Query: 225 PELEKITQVSCGEYHSAAVSENGEVYTWGL--GSVGQLGHCSLQSGDKELLPRRVVALDG 282
EK+ QVS G+ H+AA++++G V+ WG + G +G L+ K ++P +V LD
Sbjct: 119 ---EKVVQVSAGDSHTAALTDDGRVFLWGSFRDNNGVIG--LLEPMKKSMVPVQV-QLDV 172
Query: 283 IFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQ 320
+K VA G H LT+ G LY G + GQLG P+
Sbjct: 173 PVVK-VASGNDHLVMLTADGDLYTLGCGEQGQLGRVPE 209
Score = 152 (58.6 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 51/190 (26%), Positives = 88/190 (46%)
Query: 183 SECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAA 242
+E GL+ G + GQLG G + P ++ PE + Q G H+
Sbjct: 32 TEPGLVLTLGQGDVGQLGLGENVMERKKPALVS--------IPE--DVVQAEAGGMHTVC 81
Query: 243 VSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKG 302
+S++G+VY++G G LG + G E++P +V + + V+ G H+ ALT G
Sbjct: 82 LSKSGQVYSFGCNDEGALGRDTSVEGS-EMVPGKVELQEKVV--QVSAGDSHTAALTDDG 138
Query: 303 ALYAWGG--SQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNG----VQLVACGHSH 356
++ WG G +GL + S++P + ++P++ V +G V L A G +
Sbjct: 139 RVFLWGSFRDNNGVIGLLEPMKK-SMVPVQVQL---DVPVVKVASGNDHLVMLTADGDLY 194
Query: 357 TLVYMRDGRI 366
TL G++
Sbjct: 195 TLGCGEQGQL 204
Score = 145 (56.1 bits), Expect = 8.8e-08, P = 8.8e-08
Identities = 71/248 (28%), Positives = 107/248 (43%)
Query: 212 RVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKE 271
R+ K + D P+ +K+ +VS H + +E G V T G G VGQLG G+
Sbjct: 5 RIAKRRSPPADAIPKSKKV-KVS----HRSHSTEPGLVLTLGQGDVGQLG-----LGEN- 53
Query: 272 LLPRRVVALDGIFIKDVA---CGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIP 328
++ R+ AL I +DV GG+H+ L+ G +Y++G + G LG ++P
Sbjct: 54 VMERKKPALVSI-PEDVVQAEAGGMHTVCLSKSGQVYSFGCNDEGALGRDTSVEGSEMVP 112
Query: 329 NESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGY---NSYGQAANEKSTYA 385
+ + + V V+ G SHT DGR+ WG N+ E +
Sbjct: 113 GKVE----------LQEKVVQVSAGDSHTAALTDDGRVFLWGSFRDNNGVIGLLEPMKKS 162
Query: 386 WYPSPVDWCVGEVRKLAAGGGHSAVL-ADACSLKELCEFRLAESVTLSNASEIEDVASRT 444
P V V V K+A+G H +L AD +L E L E+ A+R
Sbjct: 163 MVPVQVQLDVPVV-KVASGNDHLVMLTADG----DLYTLGCGEQGQLGRVPEL--FANRG 215
Query: 445 GSEALARL 452
G + L RL
Sbjct: 216 GRQGLERL 223
Score = 128 (50.1 bits), Expect = 1.0e-05, P = 1.0e-05
Identities = 60/221 (27%), Positives = 97/221 (43%)
Query: 1 MDINEIIGETARPVDNIPAKSAIYVWGYNHSGQTGR-----KGRERQL----RIPKQLPP 51
M I + P D IP + V +HS + G +G QL + ++ P
Sbjct: 1 MSPKRIAKRRSPPADAIPKSKKVKVSHRSHSTEPGLVLTLGQGDVGQLGLGENVMERKKP 60
Query: 52 ELFGCPAGANSRWLDIACGHEHTAAVASDGTLFTWGANEFGQLG-DGTEEGRKH-PEKVK 109
L P + G HT ++ G ++++G N+ G LG D + EG + P KV
Sbjct: 61 ALVSIPEDV----VQAEAGGMHTVCLSKSGQVYSFGCNDEGALGRDTSVEGSEMVPGKV- 115
Query: 110 QLQSEFVKSISCGAHCTAAIAEPRENDGTISTSRLWVWGQNQGSN----FPRLFWGAFTP 165
+LQ + V+ +S G TAA+ + DG R+++WG + +N + P
Sbjct: 116 ELQEKVVQ-VSAGDSHTAALTD----DG-----RVFLWGSFRDNNGVIGLLEPMKKSMVP 165
Query: 166 NTI-----ICQVSCGSVHVVALSECGLLQAWGYNEYGQLGR 201
+ + +V+ G+ H+V L+ G L G E GQLGR
Sbjct: 166 VQVQLDVPVVKVASGNDHLVMLTADGDLYTLGCGEQGQLGR 206
>UNIPROTKB|F1P3N0 [details] [associations]
symbol:WBSCR16 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005739 "mitochondrion" evidence=IEA]
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005739 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS50012
GeneTree:ENSGT00700000104312 OMA:MVTLAKS EMBL:AADN02026016
EMBL:AADN02026017 IPI:IPI00579944 Ensembl:ENSGALT00000001779
Uniprot:F1P3N0
Length = 454
Score = 213 (80.0 bits), Expect = 1.8e-14, P = 1.8e-14
Identities = 96/353 (27%), Positives = 143/353 (40%)
Query: 25 VWGY--NHSGQTG--RKGRERQLRIPKQLPPELFGCPAGA--NSRWLDIACGHEHTAAVA 78
VWG N Q G R R+R L P P +R L ++CG H+ +
Sbjct: 122 VWGMGLNKDSQLGFQRSIRDRTKGYEYVLEPSPIPLPLEKPQKTRVLQVSCGRAHSLVLT 181
Query: 79 SDGTLFTWGANEFGQLGDGTEEGRKHPEK--VKQLQSEF---VKSISCGAHCTAAIAEPR 133
+FT G N +GQ G E + E + QL ++F V + CG + R
Sbjct: 182 DSEGVFTMGNNSYGQCGRKVVEDEIYSESHLIHQL-NDFDSRVVQVVCGQDHSLF----R 236
Query: 134 ENDGTISTSRLWVWGQNQGSNF-----PRLFWGAFTPNTIICQVSCGSVHVVALSECGLL 188
G + GQ ++ P G I+ QVS +A+S+ G L
Sbjct: 237 TKKGAVFACGWGADGQTGLGHYNITSVPTKLGGDIAGVNIV-QVSSYGDCCLAVSDEGDL 295
Query: 189 QAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGE 248
WG +EY QL + PR + F ++ KI + +CG + ++E G
Sbjct: 296 FGWGNSEYLQLASVTETTQVNVPR----HLPF-----KIGKIKEAACGGTGNIVLTEEGA 346
Query: 249 VYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDG----IFIKDVACGGVHSCALTSKGAL 304
V+ WG G +G+ G ++ E++P + + + V CG H ALT++G L
Sbjct: 347 VFVWGYGILGK-GPNLTETAVPEMIPPSLFGWSDFSSDVRVARVRCGLSHFAALTNRGEL 405
Query: 305 YAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILV-VPNGVQLVACGHSH 356
+ WG + G LG+G D YF P V +P V VACG H
Sbjct: 406 FVWGKNLRGCLGIGRM----------EDQYF---PWRVTIPGEVVDVACGVDH 445
Score = 192 (72.6 bits), Expect = 4.2e-12, P = 4.2e-12
Identities = 75/285 (26%), Positives = 124/285 (43%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ G N GQ GRK E ++ L +L +SR + + CG +H+ G
Sbjct: 186 VFTMGNNSYGQCGRKVVEDEIYSESHLIHQL----NDFDSRVVQVVCGQDHSLFRTKKGA 241
Query: 83 LFT--WGANEFGQLGDGTEEGRKHPEKVK-QLQSEFVKSISCGAHCTAAIAEPRENDGTI 139
+F WGA+ GQ G G P K+ + + +S C A+++ + G
Sbjct: 242 VFACGWGAD--GQTGLGHYNITSVPTKLGGDIAGVNIVQVSSYGDCCLAVSDEGDLFGWG 299
Query: 140 STSRLWVWGQNQGS--NFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYG 197
++ L + + + N PR F I + +CG + L+E G + WGY G
Sbjct: 300 NSEYLQLASVTETTQVNVPRHL--PFKIGKIK-EAACGGTGNIVLTEEGAVFVWGY---G 353
Query: 198 QLGRGITCEGLQGPRVIK----GYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWG 253
LG+G P +I G++ F + ++ +V CG H AA++ GE++ WG
Sbjct: 354 ILGKGPNLTETAVPEMIPPSLFGWSDFSSDV----RVARVRCGLSHFAALTNRGELFVWG 409
Query: 254 LGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCAL 298
G LG ++ + P RV + G + DVACG H ++
Sbjct: 410 KNLRGCLGIGRMED---QYFPWRVT-IPGEVV-DVACGVDHMVSM 449
Score = 186 (70.5 bits), Expect = 1.9e-11, P = 1.9e-11
Identities = 68/254 (26%), Positives = 117/254 (46%)
Query: 169 ICQVSCG-SVHVVALSECGLLQAWGY--NEYGQLG--RGITCEGLQGPRVIKGYAKFLD- 222
I +CG +++ + + + WG N+ QLG R I V++ L
Sbjct: 100 ITSAACGYGFTLLSSNTTDITKVWGMGLNKDSQLGFQRSIRDRTKGYEYVLEPSPIPLPL 159
Query: 223 EAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSG--DKELLPRRVVAL 280
E P+ ++ QVSCG HS ++++ V+T G S GQ G ++ + L ++
Sbjct: 160 EKPQKTRVLQVSCGRAHSLVLTDSEGVFTMGNNSYGQCGRKVVEDEIYSESHLIHQLNDF 219
Query: 281 DGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPI 340
D ++ V CG HS T KGA++A G GQ GLG + + +P + + I
Sbjct: 220 DSRVVQ-VVCGQDHSLFRTKKGAVFACGWGADGQTGLGHY--NITSVPTKLGGDIAGVNI 276
Query: 341 LVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAAN-EKSTYAWYPSPVDWCVGEVR 399
VQ+ + G L +G + GWG + Y Q A+ ++T P + + +G+++
Sbjct: 277 ------VQVSSYGDC-CLAVSDEGDLFGWGNSEYLQLASVTETTQVNVPRHLPFKIGKIK 329
Query: 400 KLAAGGGHSAVLAD 413
+ A GG + VL +
Sbjct: 330 EAACGGTGNIVLTE 343
Score = 154 (59.3 bits), Expect = 7.0e-08, P = 7.0e-08
Identities = 54/195 (27%), Positives = 86/195 (44%)
Query: 20 KSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVAS 79
K A++ G+ GQTG G +P +L ++ AG N + ++ + AV+
Sbjct: 239 KGAVFACGWGADGQTGL-GHYNITSVPTKLGGDI----AGVNI--VQVSSYGDCCLAVSD 291
Query: 80 DGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTI 139
+G LF WG +E+ QL TE + + + + +K +CG + E +G +
Sbjct: 292 EGDLFGWGNSEYLQLASVTETTQVNVPRHLPFKIGKIKEAACGGTGNIVLTE----EGAV 347
Query: 140 STSRLWVWG-QNQGSNF----------PRLF-WGAFTPNTIICQVSCGSVHVVALSECGL 187
+W +G +G N P LF W F+ + + +V CG H AL+ G
Sbjct: 348 F---VWGYGILGKGPNLTETAVPEMIPPSLFGWSDFSSDVRVARVRCGLSHFAALTNRGE 404
Query: 188 LQAWGYNEYGQLGRG 202
L WG N G LG G
Sbjct: 405 LFVWGKNLRGCLGIG 419
Score = 151 (58.2 bits), Expect = 1.5e-07, P = 1.5e-07
Identities = 37/112 (33%), Positives = 57/112 (50%)
Query: 20 KSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFG-CPAGANSRWLDIACGHEHTAAVA 78
+ A++VWGY G G+ + +P+ +PP LFG ++ R + CG H AA+
Sbjct: 344 EGAVFVWGY---GILGKGPNLTETAVPEMIPPSLFGWSDFSSDVRVARVRCGLSHFAALT 400
Query: 79 SDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGA-HCTAAI 129
+ G LF WG N G LG G E + P +V + E V ++CG H + +
Sbjct: 401 NRGELFVWGKNLRGCLGIGRMEDQYFPWRVT-IPGEVV-DVACGVDHMVSMV 450
>UNIPROTKB|J9NZT9 [details] [associations]
symbol:HERC3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005622 "intracellular" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
Pfam:PF00632 InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0016567 GO:GO:0005622
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 SUPFAM:SSF56204
GeneTree:ENSGT00660000095216 EMBL:AAEX03016754 EMBL:AAEX03016753
Ensembl:ENSCAFT00000045241 Uniprot:J9NZT9
Length = 865
Score = 217 (81.4 bits), Expect = 2.3e-14, P = 2.3e-14
Identities = 53/134 (39%), Positives = 74/134 (55%)
Query: 186 GLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSE 245
G + WG N GQLG E + P + K L +K+ +SCGE H+A +++
Sbjct: 24 GAVFGWGMNNAGQLGLSDE-EDRESPC----HVKLL----RTQKVVYISCGEEHTAVLTK 74
Query: 246 NGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALT-SKGAL 304
+G V+T+G GS GQLGH S+ E+ PRRV+ L G + +ACG H+ A S G +
Sbjct: 75 SGGVFTFGAGSCGQLGHDSMND---EVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLI 131
Query: 305 YAWGGSQAGQLGLG 318
YA+G GQLG G
Sbjct: 132 YAFGCGAKGQLGTG 145
Score = 176 (67.0 bits), Expect = 7.4e-10, P = 7.4e-10
Identities = 50/142 (35%), Positives = 71/142 (50%)
Query: 79 SDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRE--ND 136
++G +F WG N GQLG EE R+ P VK L+++ V ISCG TA + +
Sbjct: 22 AEGAVFGWGMNNAGQLGLSDEEDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTF 81
Query: 137 GTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVA-LSECGLLQAWGYNE 195
G S +L N N PR + + Q++CG H +A + GL+ A+G
Sbjct: 82 GAGSCGQLGHDSMNDEVN-PRRVLELM--GSEVTQIACGRQHTLAFVPSSGLIYAFGCGA 138
Query: 196 YGQLGRGITCEGLQGPRVIKGY 217
GQLG G TC ++ P +KGY
Sbjct: 139 KGQLGTGHTCN-VKCPSPVKGY 159
Score = 157 (60.3 bits), Expect = 8.8e-08, P = 8.8e-08
Identities = 38/116 (32%), Positives = 59/116 (50%)
Query: 13 PVDNIPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHE 72
P+ + PA+ A++ WG N++GQ G E + P + +L + + I+CG E
Sbjct: 16 PLPSQPAEGAVFGWGMNNAGQLGLSDEEDR-ESPCHV--KLL-----RTQKVVYISCGEE 67
Query: 73 HTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAA 128
HTA + G +FT+GA GQLG + +P +V +L V I+CG T A
Sbjct: 68 HTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLA 123
Score = 141 (54.7 bits), Expect = 4.9e-06, P = 4.9e-06
Identities = 42/146 (28%), Positives = 69/146 (47%)
Query: 247 GEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYA 306
G V+ WG+ + GQLG + D+E P V L + ++CG H+ LT G ++
Sbjct: 24 GAVFGWGMNNAGQLGLSDEE--DRES-PCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFT 80
Query: 307 WGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYM-RDGR 365
+G GQLG + + + P R + + ++ + V +ACG HTL ++ G
Sbjct: 81 FGAGSCGQLG--HDSMNDEVNP-------RRV-LELMGSEVTQIACGRQHTLAFVPSSGL 130
Query: 366 IHGWGYNSYGQAANEKSTYAWYPSPV 391
I+ +G + GQ + PSPV
Sbjct: 131 IYAFGCGAKGQLGTGHTCNVKCPSPV 156
>MGI|MGI:1921268 [details] [associations]
symbol:Als2 "amyotrophic lateral sclerosis 2 (juvenile)"
species:10090 "Mus musculus" [GO:0001662 "behavioral fear response"
evidence=IMP] [GO:0001726 "ruffle" evidence=IDA] [GO:0001881
"receptor recycling" evidence=IMP] [GO:0005085 "guanyl-nucleotide
exchange factor activity" evidence=IEA] [GO:0005089 "Rho
guanyl-nucleotide exchange factor activity" evidence=IEA]
[GO:0005097 "Rab GTPase activator activity" evidence=ISO]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005543
"phospholipid binding" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISO] [GO:0005737
"cytoplasm" evidence=ISO;IDA] [GO:0005769 "early endosome"
evidence=ISO] [GO:0005813 "centrosome" evidence=ISO;IDA]
[GO:0005829 "cytosol" evidence=ISO] [GO:0006979 "response to
oxidative stress" evidence=IMP] [GO:0007032 "endosome organization"
evidence=ISO] [GO:0007041 "lysosomal transport" evidence=ISO]
[GO:0007409 "axonogenesis" evidence=ISO] [GO:0007528 "neuromuscular
junction development" evidence=IMP] [GO:0007626 "locomotory
behavior" evidence=IMP] [GO:0008104 "protein localization"
evidence=IMP] [GO:0008219 "cell death" evidence=ISO] [GO:0014069
"postsynaptic density" evidence=IDA] [GO:0016020 "membrane"
evidence=ISO] [GO:0016050 "vesicle organization" evidence=IDA]
[GO:0016197 "endosomal transport" evidence=IMP] [GO:0016601 "Rac
protein signal transduction" evidence=ISO] [GO:0017112 "Rab
guanyl-nucleotide exchange factor activity" evidence=ISO]
[GO:0017137 "Rab GTPase binding" evidence=ISO] [GO:0030027
"lamellipodium" evidence=IDA] [GO:0030424 "axon" evidence=ISO]
[GO:0030425 "dendrite" evidence=ISO] [GO:0030426 "growth cone"
evidence=ISO] [GO:0030675 "Rac GTPase activator activity"
evidence=ISO] [GO:0030676 "Rac guanyl-nucleotide exchange factor
activity" evidence=ISO] [GO:0031982 "vesicle" evidence=ISO]
[GO:0032313 "regulation of Rab GTPase activity" evidence=IDA]
[GO:0032855 "positive regulation of Rac GTPase activity"
evidence=ISO] [GO:0035023 "regulation of Rho protein signal
transduction" evidence=IEA] [GO:0035249 "synaptic transmission,
glutamatergic" evidence=IMP] [GO:0042802 "identical protein
binding" evidence=ISO] [GO:0042803 "protein homodimerization
activity" evidence=ISO] [GO:0043005 "neuron projection"
evidence=ISO] [GO:0043025 "neuronal cell body" evidence=ISO]
[GO:0043197 "dendritic spine" evidence=IDA] [GO:0043231
"intracellular membrane-bounded organelle" evidence=ISO]
[GO:0043234 "protein complex" evidence=ISO] [GO:0043539 "protein
serine/threonine kinase activator activity" evidence=ISO]
[GO:0045860 "positive regulation of protein kinase activity"
evidence=ISO] [GO:0048365 "Rac GTPase binding" evidence=ISO]
[GO:0048812 "neuron projection morphogenesis" evidence=ISO]
[GO:0051260 "protein homooligomerization" evidence=ISO] [GO:0071902
"positive regulation of protein serine/threonine kinase activity"
evidence=ISO] InterPro:IPR000219 InterPro:IPR001849 Pfam:PF00621
PROSITE:PS00741 PROSITE:PS50003 PROSITE:PS50010 SMART:SM00233
MGI:MGI:1921268 INTERPRO:IPR000408 Pfam:PF00415 Pfam:PF02204
GO:GO:0005829 GO:GO:0043234 GO:GO:0042803 GO:GO:0014069
GO:GO:0008104 GO:GO:0006979 GO:GO:0005543 Gene3D:2.30.29.30
InterPro:IPR011993 GO:GO:0007528 GO:GO:0048812 GO:GO:0007626
GO:GO:0035249 GO:GO:0043539 GO:GO:0030027 GO:GO:0016197
GO:GO:0030426 Gene3D:1.20.900.10 SUPFAM:SSF48065 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 EMBL:CH466548 GO:GO:0001726
eggNOG:COG4642 InterPro:IPR003409 InterPro:IPR003123 Pfam:PF02493
SMART:SM00698 PROSITE:PS51205 GeneTree:ENSGT00600000084242
CTD:57679 HOVERGEN:HBG037320 KO:K04575 OMA:AKPAIDF
OrthoDB:EOG4FTVZP ChiTaRS:ALS2 GO:GO:0005769 GO:GO:0031982
GO:GO:0017137 GO:GO:0017112 GO:GO:0030676 GO:GO:0001662
GO:GO:0032855 GO:GO:0001881 GO:GO:0051036 GO:GO:0032313
GO:GO:0016050 PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626
PROSITE:PS50012 EMBL:AB053307 EMBL:AC153652 EMBL:BC031479
EMBL:BC046828 EMBL:AK014320 IPI:IPI00170364 IPI:IPI00309844
RefSeq:NP_001153420.2 RefSeq:NP_082993.4 RefSeq:NP_666221.1
UniGene:Mm.272078 STRING:Q920R0 PhosphoSite:Q920R0 PaxDb:Q920R0
PRIDE:Q920R0 Ensembl:ENSMUST00000027178 Ensembl:ENSMUST00000163058
GeneID:74018 KEGG:mmu:74018 UCSC:uc007bdm.2 UCSC:uc007bdn.2
HOGENOM:HOG000033908 InParanoid:Q920R0 NextBio:339546
Genevestigator:Q920R0 GermOnline:ENSMUSG00000026024 Uniprot:Q920R0
Length = 1651
Score = 154 (59.3 bits), Expect = 2.8e-14, Sum P(2) = 2.8e-14
Identities = 62/193 (32%), Positives = 81/193 (41%)
Query: 230 ITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGD--KELLPRRVVALDGIFIKD 287
+T GE + S EV+TWG G GQLGH GD L P V LDG +
Sbjct: 503 LTPTYSGEADALLPSLRTEVWTWGKGKEGQLGH-----GDVLPRLQPLCVKCLDGKEVIH 557
Query: 288 VACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGV 347
+ GG HS ALT+K +Y+WG + GQLG +E T + + NGV
Sbjct: 558 LEAGGSHSLALTAKSQVYSWGSNTFGQLG-----------HSEFPTTVPRLSKVSSENGV 606
Query: 348 QLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPS----PVDW-C--VGEVRK 400
VA G ++L + Y S Q E T PS PV C +G + +
Sbjct: 607 WSVAAGQDYSLFLVDTEDFQPGLYYSGRQDRAEGDTLPENPSGTKTPVLLSCSKLGYISR 666
Query: 401 LAAGGGHSAVLAD 413
+ AG L D
Sbjct: 667 VTAGKDSYLALVD 679
Score = 151 (58.2 bits), Expect = 8.7e-07, P = 8.7e-07
Identities = 59/197 (29%), Positives = 84/197 (42%)
Query: 230 ITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVV---ALDGIFIK 286
+ Q + G H ++E+GEVY++G +S E+ P + AL G +
Sbjct: 43 VLQAALGVRHGVLLTEDGEVYSFGT--------LPWKSESAEICPSSPLLESALVGHHVI 94
Query: 287 DVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIP-NESDTYFRNIPILVVPN 345
VA G HS A+T G +Y WG + AGQ + Q P + SD+ P L V
Sbjct: 95 TVATGSFHSGAVTESGVVYMWGENAAGQCAVANQQYVPEPSPVSISDS--ETSPSLAV-R 151
Query: 346 GVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTY-AWYPSPVDWCVGEV-RKLAA 403
+QL ACG HTL I WG Q +T+ P V+ G V ++A
Sbjct: 152 ILQL-ACGEEHTLALSLSREIWAWGTGC--QLGLITTTFPVTKPQKVEHLAGRVVLQVAC 208
Query: 404 GGGHSAVLADACSLKEL 420
G HS L ++L
Sbjct: 209 GAFHSLALVQCLPPQDL 225
Score = 149 (57.5 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 49/166 (29%), Positives = 76/166 (45%)
Query: 136 DGTISTSRLWVWGQNQGSNFPR--LFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGY 193
DG + + W P L A + +I V+ GS H A++E G++ WG
Sbjct: 59 DGEVYSFGTLPWKSESAEICPSSPLLESALVGHHVIT-VATGSFHSGAVTESGVVYMWGE 117
Query: 194 NEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELE-KITQVSCGEYHSAAVSENGEVYTW 252
N GQ + + P + + +P L +I Q++CGE H+ A+S + E++ W
Sbjct: 118 NAAGQCAVA-NQQYVPEPSPVS--ISDSETSPSLAVRILQLACGEEHTLALSLSREIWAW 174
Query: 253 GLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCAL 298
G G QLG + + P++V L G + VACG HS AL
Sbjct: 175 GTGC--QLG--LITTTFPVTKPQKVEHLAGRVVLQVACGAFHSLAL 216
Score = 131 (51.2 bits), Expect = 8.9e-12, Sum P(2) = 8.9e-12
Identities = 56/198 (28%), Positives = 89/198 (44%)
Query: 105 PEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTSRLWVWGQ-NQGSNFPRLFWGAF 163
PE +K L+ E VK S ++++ + RE + + RL + G +Q S PRL A
Sbjct: 437 PESLKDLREEQVKQESLQGKKSSSLMDIREEELEGGSRRLSLPGLLSQVS--PRLLRKAA 494
Query: 164 ---TPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKF 220
T ++ G + S + WG + GQLG G LQ P +K
Sbjct: 495 RVKTRTVVLTPTYSGEADALLPSLRTEVWTWGKGKEGQLGHGDVLPRLQ-PLCVK----C 549
Query: 221 LDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVAL 280
LD +++ + G HS A++ +VY+WG + GQLGH + L +V +
Sbjct: 550 LDG----KEVIHLEAGGSHSLALTAKSQVYSWGSNTFGQLGHSEFPTTVPRL--SKVSSE 603
Query: 281 DGIFIKDVACGGVHSCAL 298
+G++ VA G +S L
Sbjct: 604 NGVW--SVAAGQDYSLFL 619
Score = 119 (46.9 bits), Expect = 2.8e-14, Sum P(2) = 2.8e-14
Identities = 32/118 (27%), Positives = 54/118 (45%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANS--RWLDIACGHEHT 74
+ +Y+WG N +GQ ++ +P+ P + + R L +ACG EHT
Sbjct: 106 VTESGVVYMWGENAAGQCAVANQQY---VPEPSPVSISDSETSPSLAVRILQLACGEEHT 162
Query: 75 AAVASDGTLFTWGANEFGQLG-DGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAE 131
A++ ++ WG QLG T P+KV+ L V ++CGA + A+ +
Sbjct: 163 LALSLSREIWAWGTG--CQLGLITTTFPVTKPQKVEHLAGRVVLQVACGAFHSLALVQ 218
Score = 112 (44.5 bits), Expect = 1.5e-13, Sum P(2) = 1.5e-13
Identities = 37/129 (28%), Positives = 57/129 (44%)
Query: 65 LDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAH 124
+ +A G H+ AV G ++ WG N GQ ++ P V SE S++
Sbjct: 94 ITVATGSFHSGAVTESGVVYMWGENAAGQCAVANQQYVPEPSPVSISDSETSPSLAVRI- 152
Query: 125 CTAAIAEPRENDGTISTSR-LWVWGQN-Q-G---SNFP--RLFWGAFTPNTIICQVSCGS 176
A E E+ +S SR +W WG Q G + FP + ++ QV+CG+
Sbjct: 153 LQLACGE--EHTLALSLSREIWAWGTGCQLGLITTTFPVTKPQKVEHLAGRVVLQVACGA 210
Query: 177 VHVVALSEC 185
H +AL +C
Sbjct: 211 FHSLALVQC 219
Score = 79 (32.9 bits), Expect = 3.9e-10, Sum P(2) = 3.9e-10
Identities = 51/211 (24%), Positives = 83/211 (39%)
Query: 49 LPPELFGCPAGANSRWLDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKV 108
L PE P L A G H + DG +++ FG L +E P
Sbjct: 30 LTPERL--PGWGGKTVLQAALGVRHGVLLTEDGEVYS-----FGTLPWKSESAEICPS-- 80
Query: 109 KQLQSEFVKSISCGAHCTAAIAEPRENDGTISTSRL-WVWGQNQGSNFP---RLFWGAFT 164
S ++S G H +A + G ++ S + ++WG+N + + +
Sbjct: 81 ----SPLLESALVGHH-VITVATGSFHSGAVTESGVVYMWGENAAGQCAVANQQYVPEPS 135
Query: 165 PNTI------------ICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPR 212
P +I I Q++CG H +ALS + AWG QLG T + P+
Sbjct: 136 PVSISDSETSPSLAVRILQLACGEEHTLALSLSREIWAWGTG--CQLGLITTTFPVTKPQ 193
Query: 213 VIKGYAKFLDEAPELEKITQVSCGEYHSAAV 243
++ A + + QV+CG +HS A+
Sbjct: 194 KVEHLAGRV--------VLQVACGAFHSLAL 216
>ZFIN|ZDB-GENE-080929-1 [details] [associations]
symbol:als2b "amyotrophic lateral sclerosis 2b
(juvenile)" species:7955 "Danio rerio" [GO:0035023 "regulation of
Rho protein signal transduction" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0005089 "Rho guanyl-nucleotide
exchange factor activity" evidence=IEA] [GO:0005543 "phospholipid
binding" evidence=IEA] InterPro:IPR000219 InterPro:IPR001849
Pfam:PF00621 PROSITE:PS50010 SMART:SM00233 INTERPRO:IPR000408
Pfam:PF00415 Pfam:PF02204 ZFIN:ZDB-GENE-080929-1 GO:GO:0005543
Gene3D:2.30.29.30 InterPro:IPR011993 GO:GO:0005622 GO:GO:0005089
Gene3D:1.20.900.10 SUPFAM:SSF48065 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0035023 InterPro:IPR003409
InterPro:IPR003123 Pfam:PF02493 SMART:SM00698 PROSITE:PS51205
GeneTree:ENSGT00600000084242 KO:K04575 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 EMBL:CU570787 EMBL:BX927225
EMBL:CU915284 IPI:IPI01024580 RefSeq:XP_002662342.2
UniGene:Dr.158633 Ensembl:ENSDART00000149896 GeneID:100318899
KEGG:dre:100318899 CTD:100318899 Uniprot:F8W4K3
Length = 1681
Score = 178 (67.7 bits), Expect = 6.6e-09, Sum P(2) = 6.6e-09
Identities = 60/196 (30%), Positives = 91/196 (46%)
Query: 105 PEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTSRLWVWGQNQGSNFPRLFWGAFT 164
PE+V L S V + GA + E G + + W QNQ S+ + +
Sbjct: 31 PERV--LLSRPVLQAALGARHGVLLVE----GGQVYSFGELPWKQNQTSSAEPILEAVLS 84
Query: 165 PNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGR-GITCEGLQGPRVIKGYAKFLDE 223
++ V+ GS H ++E G + WG N +GQ G G++ + P + G
Sbjct: 85 EQRVVF-VAAGSAHSGVVTEDGGVHMWGENVHGQCGLLGLSV--IPNPTPV-GVLDSEAT 140
Query: 224 APELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELL-PRRVVALDG 282
P+ KI +V+CG+ H+ A+S EV+ WG G QLG L + + P++V L G
Sbjct: 141 PPQTVKILEVACGDQHTLALSAKHEVWAWGSGC--QLG---LNTSTFPVWKPQKVDHLSG 195
Query: 283 IFIKDVACGGVHSCAL 298
+ VACG HS AL
Sbjct: 196 RHVLQVACGSAHSVAL 211
Score = 172 (65.6 bits), Expect = 4.6e-09, P = 4.6e-09
Identities = 63/205 (30%), Positives = 88/205 (42%)
Query: 215 KGYAKFLDEAPE---LEK-ITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDK 270
KGY+ APE L + + Q + G H + E G+VY S G+L Q+
Sbjct: 23 KGYS--YSTAPERVLLSRPVLQAALGARHGVLLVEGGQVY-----SFGELPWKQNQTSSA 75
Query: 271 ELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNE 330
E + V++ + VA G HS +T G ++ WG + GQ GL S+IPN
Sbjct: 76 EPILEAVLSEQRVVF--VAAGSAHSGVVTEDGGVHMWGENVHGQCGL----LGLSVIPNP 129
Query: 331 SDTYFRNIPILVVPNGVQL--VACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTY-AWY 387
+ + P V++ VACG HTL + WG S Q ST+ W
Sbjct: 130 TPVGVLDSEA-TPPQTVKILEVACGDQHTLALSAKHEVWAWG--SGCQLGLNTSTFPVWK 186
Query: 388 PSPVDWCVGE-VRKLAAGGGHSAVL 411
P VD G V ++A G HS L
Sbjct: 187 PQKVDHLSGRHVLQVACGSAHSVAL 211
Score = 154 (59.3 bits), Expect = 4.8e-14, Sum P(2) = 4.8e-14
Identities = 64/234 (27%), Positives = 107/234 (45%)
Query: 195 EYGQLGRGITCEGLQG---PRVIKGYAKFLDEAPELEKITQVSCG--EYHSAAVSENGEV 249
E +L R ++ GL PR+++ ++ P + + S G E + S EV
Sbjct: 497 EEAELSRRLSLPGLLSQVSPRLLRRTSR-----PRMRAVPLASGGIPETDAHLPSLQTEV 551
Query: 250 YTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGG 309
++WG G GQLGH L L P V +L+G + VA G HS ALT++ +++WG
Sbjct: 552 WSWGQGQDGQLGHGDLLP---RLQPDCVKSLNGKEVLKVAAGAHHSLALTAQSQVFSWGC 608
Query: 310 SQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQ---LVACGHS-HTLVYMRDGR 365
+ +GQLG +F + SD I + + G+Q L+A G ++Y +
Sbjct: 609 NTSGQLGHMESPTTFPQLTKLSD----GIRVWDIGAGLQHTLLLADGDCIQPILYYSGQQ 664
Query: 366 IHGWGYNSYGQAANEKSTYAWYPSPVDWCV--GEVRKLAAGGGHSAVLADACSL 417
+ + + + + Y P + +C+ G V + AGG A L D C++
Sbjct: 665 VKEVPEPT--EEEEQTAEYTQQPVLLPFCMNLGYVSSVYAGGRTCAALTD-CNV 715
Score = 127 (49.8 bits), Expect = 0.00035, P = 0.00035
Identities = 40/139 (28%), Positives = 64/139 (46%)
Query: 228 EKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKE----LLPRRVVALDGI 283
+++ V+ G HS V+E+G V+ WG GQ G L +L +
Sbjct: 86 QRVVFVAAGSAHSGVVTEDGGVHMWGENVHGQCGLLGLSVIPNPTPVGVLDSEATPPQTV 145
Query: 284 FIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVV 343
I +VACG H+ AL++K ++AWG QLGL T +F + + + +L V
Sbjct: 146 KILEVACGDQHTLALSAKHEVWAWGSGC--QLGLN--TSTFPVWKPQKVDHLSGRHVLQV 201
Query: 344 PNGVQLVACGHSHTLVYMR 362
ACG +H++ +R
Sbjct: 202 -------ACGSAHSVALVR 213
Score = 117 (46.2 bits), Expect = 4.8e-14, Sum P(2) = 4.8e-14
Identities = 34/111 (30%), Positives = 52/111 (46%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANS--RWLDIACGHEHTAAVASD 80
+++WG N GQ G G IP P + A + L++ACG +HT A+++
Sbjct: 107 VHMWGENVHGQCGLLGLSV---IPNPTPVGVLDSEATPPQTVKILEVACGDQHTLALSAK 163
Query: 81 GTLFTWGANEFGQLGDGTEEGRK-HPEKVKQLQSEFVKSISCG-AHCTAAI 129
++ WG+ QLG T P+KV L V ++CG AH A +
Sbjct: 164 HEVWAWGSG--CQLGLNTSTFPVWKPQKVDHLSGRHVLQVACGSAHSVALV 212
Score = 109 (43.4 bits), Expect = 3.2e-13, Sum P(2) = 3.2e-13
Identities = 42/142 (29%), Positives = 57/142 (40%)
Query: 60 ANSRWLDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEF---- 115
+ R + +A G H+ V DG + WG N GQ G +P V L SE
Sbjct: 84 SEQRVVFVAAGSAHSGVVTEDGGVHMWGENVHGQCGLLGLSVIPNPTPVGVLDSEATPPQ 143
Query: 116 -VK--SISCGAHCTAAIAEPRENDGTISTSRLWVWGQN-----QGSNFPRLFWGAFTPNT 167
VK ++CG T A++ E +W WG S FP W +
Sbjct: 144 TVKILEVACGDQHTLALSAKHE---------VWAWGSGCQLGLNTSTFP--VWKPQKVDH 192
Query: 168 I----ICQVSCGSVHVVALSEC 185
+ + QV+CGS H VAL C
Sbjct: 193 LSGRHVLQVACGSAHSVALVRC 214
Score = 42 (19.8 bits), Expect = 6.6e-09, Sum P(2) = 6.6e-09
Identities = 12/33 (36%), Positives = 17/33 (51%)
Query: 342 VVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSY 374
VV N L +C H +DG++HG+G Y
Sbjct: 1118 VVSNKT-LNSCDHYQG--QWKDGKMHGFGTFRY 1147
>UNIPROTKB|Q83CB0 [details] [associations]
symbol:CBU_1217 "Hypothetical membrane spanning protein"
species:227377 "Coxiella burnetii RSA 493" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
INTERPRO:IPR000408 Pfam:PF00415 EMBL:AE016828
GenomeReviews:AE016828_GR Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS50012 OMA:GYIYAWG
RefSeq:NP_820212.1 ProteinModelPortal:Q83CB0 GeneID:1209121
KEGG:cbu:CBU_1217 PATRIC:17931169 HOGENOM:HOG000029001
ProtClustDB:CLSK914618 BioCyc:CBUR227377:GJ7S-1203-MONOMER
Uniprot:Q83CB0
Length = 497
Score = 210 (79.0 bits), Expect = 5.0e-14, P = 5.0e-14
Identities = 100/379 (26%), Positives = 164/379 (43%)
Query: 19 AKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVA 78
A++ ++ WG N++GQ G ++ P ++P + F P A ++ + +A
Sbjct: 85 ARAGVWGWGNNYTGQLDF-GNIHEMTKPARIPLDSF-IPEMAPDDYVV-----QFASADF 137
Query: 79 SDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAA--IAEPREND 136
G + A GQL + + E++ +SEF++ + T +++ R
Sbjct: 138 LSGKARSLVATRQGQLHE------YYWERISNTRSEFIQHRHYELNVTIVQLLSDYRHAF 191
Query: 137 GTISTSRLWVWGQN------QGSNF----PRLFWGAFTPNTI-----ICQVSCGSVHVVA 181
++ WG N G F P F P + I Q++ ++VA
Sbjct: 192 ILTEEGGIYGWGFNISGELGLGDRFERSQPTELPQNFFPYLLERGDRIVQLNFADRYLVA 251
Query: 182 LSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSA 241
+ G + WG+N G+LG + L P V + F + P+ + I QV G+ H+
Sbjct: 252 RTAQGHVYVWGFNYRGRLGLDDEQDRLH-P-VELSWDFFPEWHPD-DYIIQVVVGDRHTL 308
Query: 242 AVSENGEVYTWGLGSVGQLGHCSLQSGDKE-LLP-RRVVAL--DGIFIKDVACGGVHSCA 297
A+++ G +Y WG S GQLG Q ++ LLP R L I ++ GG S A
Sbjct: 309 ALTQLGYIYAWGKNSYGQLGFRDQQDRNRPALLPWNRFPGLLERNDRIIELIAGGARSLA 368
Query: 298 LTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHT 357
T +G +Y WG G P+ R ++ E+ YF + + V+L+A G HT
Sbjct: 369 RTEQGFIYIWGARWLLVRG-DPEFRHHPMLLTEN--YFPGLRRRG-DHLVELIA-GPDHT 423
Query: 358 LVYMRDGRIHGWGYNSYGQ 376
L G I+ WG N YGQ
Sbjct: 424 LARTEQGYIYAWGRNYYGQ 442
Score = 209 (78.6 bits), Expect = 6.5e-14, P = 6.5e-14
Identities = 72/264 (27%), Positives = 110/264 (41%)
Query: 71 HEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIA 130
+ H + +G ++ WG N G+LG G R P ++ Q + F + G
Sbjct: 187 YRHAFILTEEGGIYGWGFNISGELGLGDRFERSQPTELPQ--NFFPYLLERGDRIVQLNF 244
Query: 131 EPRENDGTISTSRLWVWGQN----------QGSNFP-RLFWGAFT---PNTIICQVSCGS 176
R + ++VWG N Q P L W F P+ I QV G
Sbjct: 245 ADRYLVARTAQGHVYVWGFNYRGRLGLDDEQDRLHPVELSWDFFPEWHPDDYIIQVVVGD 304
Query: 177 VHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCG 236
H +AL++ G + AWG N YGQLG + P ++ + +F ++I ++ G
Sbjct: 305 RHTLALTQLGYIYAWGKNSYGQLGFRDQ-QDRNRPALLP-WNRFPGLLERNDRIIELIAG 362
Query: 237 EYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALD--GIFIKDVACGGVH 294
S A +E G +Y WG + G + L L G + ++ G H
Sbjct: 363 GARSLARTEQGFIYIWGARWLLVRGDPEFRHHPMLLTENYFPGLRRRGDHLVELIAGPDH 422
Query: 295 SCALTSKGALYAWGGSQAGQLGLG 318
+ A T +G +YAWG + GQLGLG
Sbjct: 423 TLARTEQGYIYAWGRNYYGQLGLG 446
Score = 174 (66.3 bits), Expect = 5.1e-10, P = 5.1e-10
Identities = 65/258 (25%), Positives = 101/258 (39%)
Query: 20 KSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVAS 79
+ IY WG+N SG+ G R + + P +LP F R + + + A +
Sbjct: 196 EGGIYGWGFNISGELGLGDRFERSQ-PTELPQNFFPYLLERGDRIVQLNFADRYLVARTA 254
Query: 80 DGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTI 139
G ++ WG N G+LG E+ R HP +L +F + + R
Sbjct: 255 QGHVYVWGFNYRGRLGLDDEQDRLHPV---ELSWDFFPEWHPDDYIIQVVVGDRHTLALT 311
Query: 140 STSRLWVWGQN----------QGSNFPRLF-WGAFTP----NTIICQVSCGSVHVVALSE 184
++ WG+N Q N P L W F N I ++ G +A +E
Sbjct: 312 QLGYIYAWGKNSYGQLGFRDQQDRNRPALLPWNRFPGLLERNDRIIELIAGGARSLARTE 371
Query: 185 CGLLQAWGYNEYGQLGRGITCEGLQGPRVI-KGYAKFLDEAPELEKITQVSCGEYHSAAV 243
G + WG L RG E P ++ + Y L + + ++ G H+ A
Sbjct: 372 QGFIYIWGARWL--LVRGDP-EFRHHPMLLTENYFPGLRRRGD--HLVELIAGPDHTLAR 426
Query: 244 SENGEVYTWGLGSVGQLG 261
+E G +Y WG GQLG
Sbjct: 427 TEQGYIYAWGRNYYGQLG 444
Score = 173 (66.0 bits), Expect = 6.5e-10, P = 6.5e-10
Identities = 54/199 (27%), Positives = 90/199 (45%)
Query: 19 AKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWL-DIACGHEHTAAV 77
A+ +YVWG+N+ G+ G + +L P +L + F P ++ + G HT A+
Sbjct: 254 AQGHVYVWGFNYRGRLGLDDEQDRLH-PVELSWDFF--PEWHPDDYIIQVVVGDRHTLAL 310
Query: 78 ASDGTLFTWGANEFGQLGDGTEEGRKHPEKVK--------QLQSEFVKSISCGAHCTAAI 129
G ++ WG N +GQLG ++ R P + + ++ I+ GA ++
Sbjct: 311 TQLGYIYAWGKNSYGQLGFRDQQDRNRPALLPWNRFPGLLERNDRIIELIAGGAR---SL 367
Query: 130 AEPRENDGTISTSR-LWVWGQNQGSNFPRLFWGAFTPNTI-----ICQVSCGSVHVVALS 183
A + I +R L V G + + P L + P + ++ G H +A +
Sbjct: 368 ARTEQGFIYIWGARWLLVRGDPEFRHHPMLLTENYFPGLRRRGDHLVELIAGPDHTLART 427
Query: 184 ECGLLQAWGYNEYGQLGRG 202
E G + AWG N YGQLG G
Sbjct: 428 EQGYIYAWGRNYYGQLGLG 446
>TIGR_CMR|CBU_1217 [details] [associations]
symbol:CBU_1217 "hypothetical protein" species:227377
"Coxiella burnetii RSA 493" [GO:0008150 "biological_process"
evidence=ND] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005575 "cellular_component" evidence=ND] INTERPRO:IPR000408
Pfam:PF00415 EMBL:AE016828 GenomeReviews:AE016828_GR
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS50012 OMA:GYIYAWG RefSeq:NP_820212.1
ProteinModelPortal:Q83CB0 GeneID:1209121 KEGG:cbu:CBU_1217
PATRIC:17931169 HOGENOM:HOG000029001 ProtClustDB:CLSK914618
BioCyc:CBUR227377:GJ7S-1203-MONOMER Uniprot:Q83CB0
Length = 497
Score = 210 (79.0 bits), Expect = 5.0e-14, P = 5.0e-14
Identities = 100/379 (26%), Positives = 164/379 (43%)
Query: 19 AKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVA 78
A++ ++ WG N++GQ G ++ P ++P + F P A ++ + +A
Sbjct: 85 ARAGVWGWGNNYTGQLDF-GNIHEMTKPARIPLDSF-IPEMAPDDYVV-----QFASADF 137
Query: 79 SDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAA--IAEPREND 136
G + A GQL + + E++ +SEF++ + T +++ R
Sbjct: 138 LSGKARSLVATRQGQLHE------YYWERISNTRSEFIQHRHYELNVTIVQLLSDYRHAF 191
Query: 137 GTISTSRLWVWGQN------QGSNF----PRLFWGAFTPNTI-----ICQVSCGSVHVVA 181
++ WG N G F P F P + I Q++ ++VA
Sbjct: 192 ILTEEGGIYGWGFNISGELGLGDRFERSQPTELPQNFFPYLLERGDRIVQLNFADRYLVA 251
Query: 182 LSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSA 241
+ G + WG+N G+LG + L P V + F + P+ + I QV G+ H+
Sbjct: 252 RTAQGHVYVWGFNYRGRLGLDDEQDRLH-P-VELSWDFFPEWHPD-DYIIQVVVGDRHTL 308
Query: 242 AVSENGEVYTWGLGSVGQLGHCSLQSGDKE-LLP-RRVVAL--DGIFIKDVACGGVHSCA 297
A+++ G +Y WG S GQLG Q ++ LLP R L I ++ GG S A
Sbjct: 309 ALTQLGYIYAWGKNSYGQLGFRDQQDRNRPALLPWNRFPGLLERNDRIIELIAGGARSLA 368
Query: 298 LTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHT 357
T +G +Y WG G P+ R ++ E+ YF + + V+L+A G HT
Sbjct: 369 RTEQGFIYIWGARWLLVRG-DPEFRHHPMLLTEN--YFPGLRRRG-DHLVELIA-GPDHT 423
Query: 358 LVYMRDGRIHGWGYNSYGQ 376
L G I+ WG N YGQ
Sbjct: 424 LARTEQGYIYAWGRNYYGQ 442
Score = 209 (78.6 bits), Expect = 6.5e-14, P = 6.5e-14
Identities = 72/264 (27%), Positives = 110/264 (41%)
Query: 71 HEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIA 130
+ H + +G ++ WG N G+LG G R P ++ Q + F + G
Sbjct: 187 YRHAFILTEEGGIYGWGFNISGELGLGDRFERSQPTELPQ--NFFPYLLERGDRIVQLNF 244
Query: 131 EPRENDGTISTSRLWVWGQN----------QGSNFP-RLFWGAFT---PNTIICQVSCGS 176
R + ++VWG N Q P L W F P+ I QV G
Sbjct: 245 ADRYLVARTAQGHVYVWGFNYRGRLGLDDEQDRLHPVELSWDFFPEWHPDDYIIQVVVGD 304
Query: 177 VHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCG 236
H +AL++ G + AWG N YGQLG + P ++ + +F ++I ++ G
Sbjct: 305 RHTLALTQLGYIYAWGKNSYGQLGFRDQ-QDRNRPALLP-WNRFPGLLERNDRIIELIAG 362
Query: 237 EYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALD--GIFIKDVACGGVH 294
S A +E G +Y WG + G + L L G + ++ G H
Sbjct: 363 GARSLARTEQGFIYIWGARWLLVRGDPEFRHHPMLLTENYFPGLRRRGDHLVELIAGPDH 422
Query: 295 SCALTSKGALYAWGGSQAGQLGLG 318
+ A T +G +YAWG + GQLGLG
Sbjct: 423 TLARTEQGYIYAWGRNYYGQLGLG 446
Score = 174 (66.3 bits), Expect = 5.1e-10, P = 5.1e-10
Identities = 65/258 (25%), Positives = 101/258 (39%)
Query: 20 KSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVAS 79
+ IY WG+N SG+ G R + + P +LP F R + + + A +
Sbjct: 196 EGGIYGWGFNISGELGLGDRFERSQ-PTELPQNFFPYLLERGDRIVQLNFADRYLVARTA 254
Query: 80 DGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTI 139
G ++ WG N G+LG E+ R HP +L +F + + R
Sbjct: 255 QGHVYVWGFNYRGRLGLDDEQDRLHPV---ELSWDFFPEWHPDDYIIQVVVGDRHTLALT 311
Query: 140 STSRLWVWGQN----------QGSNFPRLF-WGAFTP----NTIICQVSCGSVHVVALSE 184
++ WG+N Q N P L W F N I ++ G +A +E
Sbjct: 312 QLGYIYAWGKNSYGQLGFRDQQDRNRPALLPWNRFPGLLERNDRIIELIAGGARSLARTE 371
Query: 185 CGLLQAWGYNEYGQLGRGITCEGLQGPRVI-KGYAKFLDEAPELEKITQVSCGEYHSAAV 243
G + WG L RG E P ++ + Y L + + ++ G H+ A
Sbjct: 372 QGFIYIWGARWL--LVRGDP-EFRHHPMLLTENYFPGLRRRGD--HLVELIAGPDHTLAR 426
Query: 244 SENGEVYTWGLGSVGQLG 261
+E G +Y WG GQLG
Sbjct: 427 TEQGYIYAWGRNYYGQLG 444
Score = 173 (66.0 bits), Expect = 6.5e-10, P = 6.5e-10
Identities = 54/199 (27%), Positives = 90/199 (45%)
Query: 19 AKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWL-DIACGHEHTAAV 77
A+ +YVWG+N+ G+ G + +L P +L + F P ++ + G HT A+
Sbjct: 254 AQGHVYVWGFNYRGRLGLDDEQDRLH-PVELSWDFF--PEWHPDDYIIQVVVGDRHTLAL 310
Query: 78 ASDGTLFTWGANEFGQLGDGTEEGRKHPEKVK--------QLQSEFVKSISCGAHCTAAI 129
G ++ WG N +GQLG ++ R P + + ++ I+ GA ++
Sbjct: 311 TQLGYIYAWGKNSYGQLGFRDQQDRNRPALLPWNRFPGLLERNDRIIELIAGGAR---SL 367
Query: 130 AEPRENDGTISTSR-LWVWGQNQGSNFPRLFWGAFTPNTI-----ICQVSCGSVHVVALS 183
A + I +R L V G + + P L + P + ++ G H +A +
Sbjct: 368 ARTEQGFIYIWGARWLLVRGDPEFRHHPMLLTENYFPGLRRRGDHLVELIAGPDHTLART 427
Query: 184 ECGLLQAWGYNEYGQLGRG 202
E G + AWG N YGQLG G
Sbjct: 428 EQGYIYAWGRNYYGQLGLG 446
>UNIPROTKB|Q5BIW4 [details] [associations]
symbol:ALS2 "Alsin" species:9598 "Pan troglodytes"
[GO:0001662 "behavioral fear response" evidence=ISS] [GO:0001726
"ruffle" evidence=ISS] [GO:0001881 "receptor recycling"
evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS] [GO:0005769
"early endosome" evidence=ISS] [GO:0005829 "cytosol" evidence=ISS]
[GO:0006979 "response to oxidative stress" evidence=ISS]
[GO:0007528 "neuromuscular junction development" evidence=ISS]
[GO:0007626 "locomotory behavior" evidence=ISS] [GO:0008104
"protein localization" evidence=ISS] [GO:0014069 "postsynaptic
density" evidence=ISS] [GO:0016050 "vesicle organization"
evidence=ISS] [GO:0016197 "endosomal transport" evidence=ISS]
[GO:0017112 "Rab guanyl-nucleotide exchange factor activity"
evidence=ISS] [GO:0017137 "Rab GTPase binding" evidence=ISS]
[GO:0030027 "lamellipodium" evidence=ISS] [GO:0030425 "dendrite"
evidence=ISS] [GO:0030676 "Rac guanyl-nucleotide exchange factor
activity" evidence=ISS] [GO:0031982 "vesicle" evidence=ISS]
[GO:0032313 "regulation of Rab GTPase activity" evidence=ISS]
[GO:0032855 "positive regulation of Rac GTPase activity"
evidence=ISS] [GO:0035249 "synaptic transmission, glutamatergic"
evidence=ISS] [GO:0042803 "protein homodimerization activity"
evidence=ISS] [GO:0043197 "dendritic spine" evidence=ISS]
[GO:0043234 "protein complex" evidence=ISS] [GO:0043539 "protein
serine/threonine kinase activator activity" evidence=ISS]
[GO:0045860 "positive regulation of protein kinase activity"
evidence=ISS] [GO:0048812 "neuron projection morphogenesis"
evidence=ISS] [GO:0051036 "regulation of endosome size"
evidence=ISS] [GO:0071902 "positive regulation of protein
serine/threonine kinase activity" evidence=ISS] [GO:0005813
"centrosome" evidence=ISS] [GO:0005085 "guanyl-nucleotide exchange
factor activity" evidence=ISS] InterPro:IPR000219
InterPro:IPR001849 Pfam:PF00621 PROSITE:PS00741 PROSITE:PS50003
PROSITE:PS50010 SMART:SM00233 INTERPRO:IPR000408 Pfam:PF00415
Pfam:PF02204 GO:GO:0005829 GO:GO:0043234 GO:GO:0042803
GO:GO:0014069 GO:GO:0008104 GO:GO:0006979 GO:GO:0005543
Gene3D:2.30.29.30 InterPro:IPR011993 GO:GO:0007528 GO:GO:0048812
GO:GO:0007626 GO:GO:0035249 GO:GO:0043539 GO:GO:0030027
GO:GO:0016197 Gene3D:1.20.900.10 SUPFAM:SSF48065 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0001726 eggNOG:COG4642
InterPro:IPR003409 InterPro:IPR003123 Pfam:PF02493 SMART:SM00698
PROSITE:PS51205 CTD:57679 HOVERGEN:HBG037320 KO:K04575
OrthoDB:EOG4FTVZP GO:GO:0005769 GO:GO:0031982 GO:GO:0017137
GO:GO:0017112 GO:GO:0030676 GO:GO:0001662 GO:GO:0032855
GO:GO:0001881 GO:GO:0051036 GO:GO:0032313 GO:GO:0016050
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
HOGENOM:HOG000033908 EMBL:BK005194 RefSeq:NP_001073389.1
UniGene:Ptr.813 ProteinModelPortal:Q5BIW4 STRING:Q5BIW4
PRIDE:Q5BIW4 GeneID:470613 KEGG:ptr:470613 InParanoid:Q5BIW4
NextBio:20847741 Uniprot:Q5BIW4
Length = 1657
Score = 161 (61.7 bits), Expect = 7.1e-08, P = 7.1e-08
Identities = 59/197 (29%), Positives = 84/197 (42%)
Query: 230 ITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVV---ALDGIFIK 286
+ Q + G H ++E+GEVY++G +SG E+ P + AL G ++
Sbjct: 43 VLQAALGVKHGVLLTEDGEVYSFGT--------LPWRSGPVEICPSSPILENALVGQYVV 94
Query: 287 DVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNE-SDTYFRNIPILVVPN 345
VA G HS A+T G Y WG + AGQ + Q + PN S P+L V
Sbjct: 95 TVATGSFHSGAVTDNGVAYMWGENSAGQCAVANQ--QYVPEPNPVSIADSEASPLLAV-R 151
Query: 346 GVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTY-AWYPSPVDWCVGEV-RKLAA 403
+QL ACG HTL I WG Q + + P V+ G V ++A
Sbjct: 152 ILQL-ACGEEHTLALSISREIWAWGTGC--QLGLITTAFPVTKPQKVEHLAGRVVLQVAC 208
Query: 404 GGGHSAVLADACSLKEL 420
G HS L ++L
Sbjct: 209 GAFHSLALVQCLPSQDL 225
Score = 154 (59.3 bits), Expect = 5.9e-14, Sum P(2) = 5.9e-14
Identities = 38/89 (42%), Positives = 47/89 (52%)
Query: 230 ITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGD--KELLPRRVVALDGIFIKD 287
+T GE + S EV+TWG G GQLGH GD L P V LDG +
Sbjct: 509 LTPTYSGEADALLPSLRTEVWTWGKGKEGQLGH-----GDVLPRLQPLCVKCLDGKEVIH 563
Query: 288 VACGGVHSCALTSKGALYAWGGSQAGQLG 316
+ GG HS ALT+K +Y+WG + GQLG
Sbjct: 564 LEAGGYHSLALTAKSQVYSWGSNTFGQLG 592
Score = 145 (56.1 bits), Expect = 1.8e-05, Sum P(2) = 1.8e-05
Identities = 64/238 (26%), Positives = 99/238 (41%)
Query: 134 ENDGTISTSRLWVWGQNQGSNFP----RL-FWGAFTPNTIICQVSCGSVHVVALSECGLL 188
E +G+ + +W Q +FP RL WG T + Q + G H V L+E G +
Sbjct: 10 EAEGSKERGLVHIW---QAGSFPITPERLPGWGGKT----VLQAALGVKHGVLLTEDGEV 62
Query: 189 QAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGE 248
++G T GP I + L+ A + + V+ G +HS AV++NG
Sbjct: 63 YSFG-----------TLPWRSGPVEICPSSPILENALVGQYVVTVATGSFHSGAVTDNGV 111
Query: 249 VYTWGLGSVGQLGHCSLQ----SGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGAL 304
Y WG S GQ + Q + L + I +ACG H+ AL+ +
Sbjct: 112 AYMWGENSAGQCAVANQQYVPEPNPVSIADSEASPLLAVRILQLACGEEHTLALSISREI 171
Query: 305 YAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMR 362
+AWG QLGL T +F + + + +L V ACG H+L ++
Sbjct: 172 WAWG--TGCQLGL--ITTAFPVTKPQKVEHLAGRVVLQV-------ACGAFHSLALVQ 218
Score = 116 (45.9 bits), Expect = 5.9e-14, Sum P(2) = 5.9e-14
Identities = 33/111 (29%), Positives = 52/111 (46%)
Query: 24 YVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGA--NSRWLDIACGHEHTAAVASDG 81
Y+WG N +GQ ++ +P+ P + A R L +ACG EHT A++
Sbjct: 113 YMWGENSAGQCAVANQQY---VPEPNPVSIADSEASPLLAVRILQLACGEEHTLALSISR 169
Query: 82 TLFTWGANEFGQLG-DGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAE 131
++ WG QLG T P+KV+ L V ++CGA + A+ +
Sbjct: 170 EIWAWGTG--CQLGLITTAFPVTKPQKVEHLAGRVVLQVACGAFHSLALVQ 218
Score = 106 (42.4 bits), Expect = 6.4e-13, Sum P(2) = 6.4e-13
Identities = 33/133 (24%), Positives = 52/133 (39%)
Query: 67 IACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEF-------VKSI 119
+A G H+ AV +G + WG N GQ ++ P V SE + +
Sbjct: 96 VATGSFHSGAVTDNGVAYMWGENSAGQCAVANQQYVPEPNPVSIADSEASPLLAVRILQL 155
Query: 120 SCGAHCTAAIAEPRENDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTI-------ICQV 172
+CG T A++ RE +W WG + P + + QV
Sbjct: 156 ACGEEHTLALSISRE---------IWAWGTGCQLGLITTAFPVTKPQKVEHLAGRVVLQV 206
Query: 173 SCGSVHVVALSEC 185
+CG+ H +AL +C
Sbjct: 207 ACGAFHSLALVQC 219
Score = 71 (30.1 bits), Expect = 3.2e-05, Sum P(2) = 3.2e-05
Identities = 21/77 (27%), Positives = 33/77 (42%)
Query: 134 ENDGTISTSR--LWVWGQNQ------GSNFPRL--FWGAFTPNTIICQVSCGSVHVVALS 183
E D + + R +W WG+ + G PRL + + G H +AL+
Sbjct: 516 EADALLPSLRTEVWTWGKGKEGQLGHGDVLPRLQPLCVKCLDGKEVIHLEAGGYHSLALT 575
Query: 184 ECGLLQAWGYNEYGQLG 200
+ +WG N +GQLG
Sbjct: 576 AKSQVYSWGSNTFGQLG 592
Score = 68 (29.0 bits), Expect = 6.4e-05, Sum P(2) = 6.4e-05
Identities = 55/218 (25%), Positives = 89/218 (40%)
Query: 166 NTIICQVSCGS---VHVVALSECGLLQAWGY-NEYGQLGRGITCE-GLQGPRVIKGYAKF 220
N+++ VSC S V V A E G L N Y CE G Q G +
Sbjct: 393 NSLV--VSCASAVGVRVAATYEAGALSLKKVMNFYSTT----PCETGAQAGSSAIG-PEG 445
Query: 221 LDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRV--V 278
L ++ E E++ Q S S+++ + E T G GS +L L S L R+ V
Sbjct: 446 LKDSRE-EQVKQESMQGKKSSSLVDIREEETEG-GS-RRLSLPGLLSQVSPRLLRKAARV 502
Query: 279 ALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNI 338
+ + G + + + ++ WG + GQLG G ++P + +
Sbjct: 503 KTRTVVLTPTYSGEADALLPSLRTEVWTWGKGKEGQLGHG------DVLPRLQPLCVKCL 556
Query: 339 PILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQ 376
V + L A G+ H+L +++ WG N++GQ
Sbjct: 557 DGKEV---IHLEAGGY-HSLALTAKSQVYSWGSNTFGQ 590
Score = 43 (20.2 bits), Expect = 1.8e-05, Sum P(2) = 1.8e-05
Identities = 16/44 (36%), Positives = 17/44 (38%)
Query: 369 WGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVL 411
WG GQ + P V G EV L AGG HS L
Sbjct: 531 WGKGKEGQLGHGDVLPRLQPLCVKCLDGKEVIHLEAGGYHSLAL 574
>UNIPROTKB|Q96Q42 [details] [associations]
symbol:ALS2 "Alsin" species:9606 "Homo sapiens" [GO:0005543
"phospholipid binding" evidence=IEA] [GO:0001662 "behavioral fear
response" evidence=IEA] [GO:0001701 "in utero embryonic
development" evidence=IEA] [GO:0001881 "receptor recycling"
evidence=IEA] [GO:0006979 "response to oxidative stress"
evidence=IEA] [GO:0007409 "axonogenesis" evidence=IEA] [GO:0007528
"neuromuscular junction development" evidence=IEA] [GO:0007626
"locomotory behavior" evidence=IEA] [GO:0008104 "protein
localization" evidence=IEA] [GO:0008219 "cell death" evidence=IEA]
[GO:0014069 "postsynaptic density" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0016050 "vesicle organization"
evidence=IEA] [GO:0016197 "endosomal transport" evidence=IEA]
[GO:0016601 "Rac protein signal transduction" evidence=IEA]
[GO:0030424 "axon" evidence=IEA] [GO:0032313 "regulation of Rab
GTPase activity" evidence=IEA] [GO:0035249 "synaptic transmission,
glutamatergic" evidence=IEA] [GO:0043025 "neuronal cell body"
evidence=IEA] [GO:0017112 "Rab guanyl-nucleotide exchange factor
activity" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0031982 "vesicle" evidence=IDA] [GO:0005769 "early endosome"
evidence=IDA] [GO:0007032 "endosome organization" evidence=IGI;NAS]
[GO:0043234 "protein complex" evidence=IDA] [GO:0005085
"guanyl-nucleotide exchange factor activity" evidence=IDA]
[GO:0017137 "Rab GTPase binding" evidence=NAS;IDA] [GO:0051036
"regulation of endosome size" evidence=IEP] [GO:0032855 "positive
regulation of Rac GTPase activity" evidence=IDA] [GO:0035022
"positive regulation of Rac protein signal transduction"
evidence=IC] [GO:0030425 "dendrite" evidence=IDA] [GO:0048812
"neuron projection morphogenesis" evidence=IDA] [GO:0043539
"protein serine/threonine kinase activator activity" evidence=IDA]
[GO:0045860 "positive regulation of protein kinase activity"
evidence=IDA] [GO:0001726 "ruffle" evidence=ISS] [GO:0030027
"lamellipodium" evidence=ISS] [GO:0005087 "Ran guanyl-nucleotide
exchange factor activity" evidence=NAS] [GO:0030676 "Rac
guanyl-nucleotide exchange factor activity" evidence=IDA]
[GO:0042803 "protein homodimerization activity" evidence=IPI]
[GO:0030426 "growth cone" evidence=ISS] [GO:0005813 "centrosome"
evidence=IDA] [GO:0071902 "positive regulation of protein
serine/threonine kinase activity" evidence=IDA] InterPro:IPR000219
InterPro:IPR001849 Pfam:PF00621 PROSITE:PS00741 PROSITE:PS50003
PROSITE:PS50010 SMART:SM00233 EMBL:AB053305 EMBL:AB053306
INTERPRO:IPR000408 Pfam:PF00415 Pfam:PF02204 GO:GO:0005829
GO:GO:0005813 GO:GO:0043234 GO:GO:0014069 GO:GO:0008104
GO:GO:0006979 GO:GO:0016020 GO:GO:0005543 Gene3D:2.30.29.30
InterPro:IPR011993 GO:GO:0008219 EMBL:CH471063 GO:GO:0030424
GO:GO:0043025 GO:GO:0030425 GO:GO:0007528 GO:GO:0001701
GO:GO:0048812 GO:GO:0007626 GO:GO:0035249 GO:GO:0043539
GO:GO:0030027 GO:GO:0016197 GO:GO:0030426 Gene3D:1.20.900.10
SUPFAM:SSF48065 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0007409 GO:GO:0001726 GO:GO:0016601
GO:GO:0007032 eggNOG:COG4642 InterPro:IPR003409 InterPro:IPR003123
Pfam:PF02493 SMART:SM00698 PROSITE:PS51205 EMBL:AF391100
EMBL:AB046783 EMBL:AK023024 EMBL:AC007242 EMBL:AC007279
EMBL:BC029174 IPI:IPI00242146 IPI:IPI00295004 IPI:IPI00295005
RefSeq:NP_001129217.1 RefSeq:NP_065970.2 UniGene:Hs.471096
UniGene:Hs.621812 ProteinModelPortal:Q96Q42 SMR:Q96Q42
MINT:MINT-1632128 STRING:Q96Q42 PhosphoSite:Q96Q42 DMDM:296434394
PaxDb:Q96Q42 PRIDE:Q96Q42 Ensembl:ENST00000264276
Ensembl:ENST00000467448 GeneID:57679 KEGG:hsa:57679 UCSC:uc002uyo.3
UCSC:uc002uyq.3 UCSC:uc002uyr.3 CTD:57679 GeneCards:GC02M202564
H-InvDB:HIX0200249 HGNC:HGNC:443 HPA:HPA046588 MIM:205100
MIM:606352 MIM:606353 MIM:607225 neXtProt:NX_Q96Q42 Orphanet:803
Orphanet:293168 Orphanet:300605 Orphanet:247604 PharmGKB:PA24732
HOVERGEN:HBG037320 InParanoid:Q96Q42 KO:K04575 OMA:AKPAIDF
OrthoDB:EOG4FTVZP ChiTaRS:ALS2 GenomeRNAi:57679 NextBio:64490
ArrayExpress:Q96Q42 Bgee:Q96Q42 CleanEx:HS_ALS2
Genevestigator:Q96Q42 GermOnline:ENSG00000003393 GO:GO:0005769
GO:GO:0031982 GO:GO:0017137 GO:GO:0017112 GO:GO:0030676
GO:GO:0005087 GO:GO:0001662 GO:GO:0032855 GO:GO:0035022
GO:GO:0001881 GO:GO:0051036 GO:GO:0032313 GO:GO:0016050
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
Uniprot:Q96Q42
Length = 1657
Score = 160 (61.4 bits), Expect = 9.2e-08, P = 9.2e-08
Identities = 59/197 (29%), Positives = 84/197 (42%)
Query: 230 ITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVV---ALDGIFIK 286
+ Q + G H ++E+GEVY++G +SG E+ P + AL G ++
Sbjct: 43 VLQAALGVKHGVLLTEDGEVYSFGT--------LPWRSGPVEICPSSPILENALVGQYVI 94
Query: 287 DVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNE-SDTYFRNIPILVVPN 345
VA G HS A+T G Y WG + AGQ + Q + PN S P+L V
Sbjct: 95 TVATGSFHSGAVTDNGVAYMWGENSAGQCAVANQ--QYVPEPNPVSIADSEASPLLAV-R 151
Query: 346 GVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTY-AWYPSPVDWCVGEV-RKLAA 403
+QL ACG HTL I WG Q + + P V+ G V ++A
Sbjct: 152 ILQL-ACGEEHTLALSISREIWAWGTGC--QLGLITTAFPVTKPQKVEHLAGRVVLQVAC 208
Query: 404 GGGHSAVLADACSLKEL 420
G HS L ++L
Sbjct: 209 GAFHSLALVQCLPSQDL 225
Score = 154 (59.3 bits), Expect = 5.9e-14, Sum P(2) = 5.9e-14
Identities = 38/89 (42%), Positives = 47/89 (52%)
Query: 230 ITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGD--KELLPRRVVALDGIFIKD 287
+T GE + S EV+TWG G GQLGH GD L P V LDG +
Sbjct: 509 LTPTYSGEADALLPSLRTEVWTWGKGKEGQLGH-----GDVLPRLQPLCVKCLDGKEVIH 563
Query: 288 VACGGVHSCALTSKGALYAWGGSQAGQLG 316
+ GG HS ALT+K +Y+WG + GQLG
Sbjct: 564 LEAGGYHSLALTAKSQVYSWGSNTFGQLG 592
Score = 144 (55.7 bits), Expect = 2.3e-05, Sum P(2) = 2.3e-05
Identities = 64/238 (26%), Positives = 99/238 (41%)
Query: 134 ENDGTISTSRLWVWGQNQGSNFP----RL-FWGAFTPNTIICQVSCGSVHVVALSECGLL 188
E +G+ + +W Q +FP RL WG T + Q + G H V L+E G +
Sbjct: 10 EAEGSKERGLVHIW---QAGSFPITPERLPGWGGKT----VLQAALGVKHGVLLTEDGEV 62
Query: 189 QAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGE 248
++G T GP I + L+ A + + V+ G +HS AV++NG
Sbjct: 63 YSFG-----------TLPWRSGPVEICPSSPILENALVGQYVITVATGSFHSGAVTDNGV 111
Query: 249 VYTWGLGSVGQLGHCSLQ----SGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGAL 304
Y WG S GQ + Q + L + I +ACG H+ AL+ +
Sbjct: 112 AYMWGENSAGQCAVANQQYVPEPNPVSIADSEASPLLAVRILQLACGEEHTLALSISREI 171
Query: 305 YAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMR 362
+AWG QLGL T +F + + + +L V ACG H+L ++
Sbjct: 172 WAWG--TGCQLGL--ITTAFPVTKPQKVEHLAGRVVLQV-------ACGAFHSLALVQ 218
Score = 116 (45.9 bits), Expect = 5.9e-14, Sum P(2) = 5.9e-14
Identities = 33/111 (29%), Positives = 52/111 (46%)
Query: 24 YVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGA--NSRWLDIACGHEHTAAVASDG 81
Y+WG N +GQ ++ +P+ P + A R L +ACG EHT A++
Sbjct: 113 YMWGENSAGQCAVANQQY---VPEPNPVSIADSEASPLLAVRILQLACGEEHTLALSISR 169
Query: 82 TLFTWGANEFGQLG-DGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAE 131
++ WG QLG T P+KV+ L V ++CGA + A+ +
Sbjct: 170 EIWAWGTG--CQLGLITTAFPVTKPQKVEHLAGRVVLQVACGAFHSLALVQ 218
Score = 107 (42.7 bits), Expect = 5.0e-13, Sum P(2) = 5.0e-13
Identities = 33/135 (24%), Positives = 53/135 (39%)
Query: 65 LDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEF-------VK 117
+ +A G H+ AV +G + WG N GQ ++ P V SE +
Sbjct: 94 ITVATGSFHSGAVTDNGVAYMWGENSAGQCAVANQQYVPEPNPVSIADSEASPLLAVRIL 153
Query: 118 SISCGAHCTAAIAEPRENDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTI-------IC 170
++CG T A++ RE +W WG + P + +
Sbjct: 154 QLACGEEHTLALSISRE---------IWAWGTGCQLGLITTAFPVTKPQKVEHLAGRVVL 204
Query: 171 QVSCGSVHVVALSEC 185
QV+CG+ H +AL +C
Sbjct: 205 QVACGAFHSLALVQC 219
Score = 71 (30.1 bits), Expect = 3.2e-05, Sum P(2) = 3.2e-05
Identities = 21/77 (27%), Positives = 33/77 (42%)
Query: 134 ENDGTISTSR--LWVWGQNQ------GSNFPRL--FWGAFTPNTIICQVSCGSVHVVALS 183
E D + + R +W WG+ + G PRL + + G H +AL+
Sbjct: 516 EADALLPSLRTEVWTWGKGKEGQLGHGDVLPRLQPLCVKCLDGKEVIHLEAGGYHSLALT 575
Query: 184 ECGLLQAWGYNEYGQLG 200
+ +WG N +GQLG
Sbjct: 576 AKSQVYSWGSNTFGQLG 592
Score = 43 (20.2 bits), Expect = 2.3e-05, Sum P(2) = 2.3e-05
Identities = 16/44 (36%), Positives = 17/44 (38%)
Query: 369 WGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVL 411
WG GQ + P V G EV L AGG HS L
Sbjct: 531 WGKGKEGQLGHGDVLPRLQPLCVKCLDGKEVIHLEAGGYHSLAL 574
>RGD|1310372 [details] [associations]
symbol:Als2 "amyotrophic lateral sclerosis 2 (juvenile)"
species:10116 "Rattus norvegicus" [GO:0001662 "behavioral fear
response" evidence=IEA;ISO] [GO:0001701 "in utero embryonic
development" evidence=IEP] [GO:0001726 "ruffle" evidence=IEA;ISO]
[GO:0001881 "receptor recycling" evidence=IEA;ISO] [GO:0003674
"molecular_function" evidence=ND] [GO:0005085 "guanyl-nucleotide
exchange factor activity" evidence=ISO;ISS] [GO:0005543
"phospholipid binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=ISO;IDA] [GO:0005769 "early endosome" evidence=ISO;ISS]
[GO:0005813 "centrosome" evidence=IEA;ISO] [GO:0005829 "cytosol"
evidence=ISO;ISS] [GO:0006979 "response to oxidative stress"
evidence=IEA;ISO] [GO:0007032 "endosome organization" evidence=ISO]
[GO:0007409 "axonogenesis" evidence=IMP] [GO:0007528 "neuromuscular
junction development" evidence=IEA;ISO] [GO:0007626 "locomotory
behavior" evidence=IEA;ISO] [GO:0008104 "protein localization"
evidence=IEA;ISO] [GO:0008219 "cell death" evidence=IMP]
[GO:0014069 "postsynaptic density" evidence=IEA;ISO] [GO:0016020
"membrane" evidence=IDA] [GO:0016050 "vesicle organization"
evidence=IEA;ISO] [GO:0016197 "endosomal transport"
evidence=IEA;ISO] [GO:0016601 "Rac protein signal transduction"
evidence=IDA] [GO:0017112 "Rab guanyl-nucleotide exchange factor
activity" evidence=ISO;ISS] [GO:0017137 "Rab GTPase binding"
evidence=ISO;ISS] [GO:0030027 "lamellipodium" evidence=IEA;ISO]
[GO:0030424 "axon" evidence=IDA] [GO:0030425 "dendrite"
evidence=ISO;ISS;IDA] [GO:0030426 "growth cone" evidence=IDA]
[GO:0030676 "Rac guanyl-nucleotide exchange factor activity"
evidence=ISO;ISS] [GO:0031982 "vesicle" evidence=ISO;ISS]
[GO:0032313 "regulation of Rab GTPase activity" evidence=IEA;ISO]
[GO:0032855 "positive regulation of Rac GTPase activity"
evidence=ISO;ISS] [GO:0035249 "synaptic transmission,
glutamatergic" evidence=IEA;ISO] [GO:0042803 "protein
homodimerization activity" evidence=ISO;ISS] [GO:0043005 "neuron
projection" evidence=IDA] [GO:0043025 "neuronal cell body"
evidence=IDA] [GO:0043197 "dendritic spine" evidence=ISO]
[GO:0043231 "intracellular membrane-bounded organelle"
evidence=IDA] [GO:0043234 "protein complex" evidence=ISO;ISS]
[GO:0043539 "protein serine/threonine kinase activator activity"
evidence=ISO;ISS] [GO:0045860 "positive regulation of protein
kinase activity" evidence=ISO;ISS] [GO:0048812 "neuron projection
morphogenesis" evidence=ISO;ISS] [GO:0051036 "regulation of
endosome size" evidence=ISO;ISS] [GO:0071902 "positive regulation
of protein serine/threonine kinase activity" evidence=ISO]
InterPro:IPR000219 InterPro:IPR001849 Pfam:PF00621 PROSITE:PS00741
PROSITE:PS50003 PROSITE:PS50010 SMART:SM00233 RGD:1310372
INTERPRO:IPR000408 Pfam:PF00415 Pfam:PF02204 GO:GO:0005829
GO:GO:0005813 GO:GO:0043234 GO:GO:0042803 GO:GO:0014069
GO:GO:0008104 GO:GO:0006979 GO:GO:0016020 GO:GO:0005543
Gene3D:2.30.29.30 InterPro:IPR011993 GO:GO:0008219 GO:GO:0030424
GO:GO:0043025 GO:GO:0030425 GO:GO:0007528 GO:GO:0001701
GO:GO:0007626 GO:GO:0035249 GO:GO:0043539 GO:GO:0016197
GO:GO:0030426 Gene3D:1.20.900.10 SUPFAM:SSF48065 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0007409 GO:GO:0016601
eggNOG:COG4642 InterPro:IPR003409 InterPro:IPR003123 Pfam:PF02493
SMART:SM00698 PROSITE:PS51205 GeneTree:ENSGT00600000084242
CTD:57679 HOVERGEN:HBG037320 KO:K04575 OrthoDB:EOG4FTVZP
GO:GO:0005769 GO:GO:0031982 GO:GO:0017137 GO:GO:0017112
GO:GO:0030676 GO:GO:0001662 GO:GO:0032855 GO:GO:0001881
GO:GO:0051036 GO:GO:0032313 GO:GO:0016050 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
HOGENOM:HOG000033908 EMBL:AABR03068212 EMBL:BK005190
IPI:IPI00366955 RefSeq:NP_001013431.1 UniGene:Rn.219733
ProteinModelPortal:P0C5Y8 STRING:P0C5Y8 PhosphoSite:P0C5Y8
Ensembl:ENSRNOT00000035209 GeneID:363235 KEGG:rno:363235
UCSC:RGD:1310372 InParanoid:P0C5Y8 NextBio:682932
Genevestigator:P0C5Y8 Uniprot:P0C5Y8
Length = 1651
Score = 158 (60.7 bits), Expect = 7.0e-14, Sum P(2) = 7.0e-14
Identities = 69/221 (31%), Positives = 91/221 (41%)
Query: 230 ITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGD--KELLPRRVVALDGIFIKD 287
+T GE + S EV+TWG G GQLGH GD L P V LDG +
Sbjct: 503 LTPTYSGEADALLPSLRTEVWTWGKGKEGQLGH-----GDVLPRLQPLCVKCLDGKEVIH 557
Query: 288 VACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGV 347
+ GG HS ALT+K +Y+WG + GQLG +E T + + +GV
Sbjct: 558 LEAGGSHSLALTAKSQVYSWGSNTFGQLG-----------HSEFPTTVPRLSKVSSESGV 606
Query: 348 QLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPS----PVDW-C--VGEVRK 400
VA GH ++L + Y S Q E T PS PV C +G + +
Sbjct: 607 WSVAAGHGYSLFLVDTEDFQPGLYYSGRQDRAEGDTLPENPSGTTTPVLLSCSKLGYISR 666
Query: 401 LAAGGGHSAVLADACSL---KELCEFRLAESVTLSNASEIE 438
+ AG L D + L E E S SEI+
Sbjct: 667 VTAGKDSYLALVDKNIMGYIASLHELATTERRFYSKLSEIK 707
Score = 155 (59.6 bits), Expect = 3.2e-07, P = 3.2e-07
Identities = 59/197 (29%), Positives = 85/197 (43%)
Query: 230 ITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVV---ALDGIFIK 286
+ Q + G H ++E+GEVY++G +S E+ P + AL G +
Sbjct: 43 VLQAALGVKHGVLLTEDGEVYSFGT--------LPWKSEAAEICPSSPLLESALVGHHVV 94
Query: 287 DVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIP-NESDTYFRNIPILVVPN 345
VA G HS A+T G +Y WG + AGQ + Q P + SD+ P+L V
Sbjct: 95 TVATGSFHSGAVTESGVVYMWGENAAGQCAVANQQYVSEPSPVSISDS--ETSPLLAV-R 151
Query: 346 GVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTY-AWYPSPVDWCVGEV-RKLAA 403
+QL ACG HTL I WG Q +T+ P V+ G V ++A
Sbjct: 152 ILQL-ACGEEHTLALSISREIWAWGTGC--QLGLITTTFPVTKPQKVEHLAGRVVLQVAC 208
Query: 404 GGGHSAVLADACSLKEL 420
G HS L ++L
Sbjct: 209 GAFHSLALVQCLPPQDL 225
Score = 146 (56.5 bits), Expect = 3.0e-06, P = 3.0e-06
Identities = 42/131 (32%), Positives = 66/131 (50%)
Query: 169 ICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELE 228
+ V+ GS H A++E G++ WG N GQ + + P + + +P L
Sbjct: 93 VVTVATGSFHSGAVTESGVVYMWGENAAGQCAVA-NQQYVSEPSPVS--ISDSETSPLLA 149
Query: 229 -KITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKD 287
+I Q++CGE H+ A+S + E++ WG G QLG + + P++V L G +
Sbjct: 150 VRILQLACGEEHTLALSISREIWAWGTGC--QLG--LITTTFPVTKPQKVEHLAGRVVLQ 205
Query: 288 VACGGVHSCAL 298
VACG HS AL
Sbjct: 206 VACGAFHSLAL 216
Score = 142 (55.0 bits), Expect = 8.2e-06, P = 8.2e-06
Identities = 77/309 (24%), Positives = 124/309 (40%)
Query: 10 TARPVDNIPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLP------PELFGCPAGANSR 63
+AR + P + + S + ++ ER+ ++P+ P P+L P + S
Sbjct: 326 SARTAPSYPDTQTVTAYLQKLSEHSVKENHEREEKLPQVQPLVEEAVPDLHSPPTTSTSA 385
Query: 64 W--LDIACGHE---HTAAVASDGTLFTWGANEFGQLGD---GTEEGRKH--PEKVKQLQS 113
L ++C AA G L F G G PE +K L+
Sbjct: 386 LNSLVVSCASAVGVRVAATYEAGALSLKKVMNFYSTAPCEPGAPSGTASTGPESLKDLRE 445
Query: 114 EFVKSISCGAHCTAAIAEPRENDGTISTSRLWVWGQ-NQGSNFPRLFWGAF---TPNTII 169
E VK S ++++ + RE + + RL + G +Q S PRL A T ++
Sbjct: 446 EQVKQESLQGKKSSSLMDIREEESEGGSRRLSLPGLLSQVS--PRLLRKAARVKTRTVVL 503
Query: 170 CQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEK 229
G + S + WG + GQLG G LQ P +K LD ++
Sbjct: 504 TPTYSGEADALLPSLRTEVWTWGKGKEGQLGHGDVLPRLQ-PLCVK----CLDG----KE 554
Query: 230 ITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVA 289
+ + G HS A++ +VY+WG + GQLGH + L +V + G++ VA
Sbjct: 555 VIHLEAGGSHSLALTAKSQVYSWGSNTFGQLGHSEFPTTVPRL--SKVSSESGVW--SVA 610
Query: 290 CGGVHSCAL 298
G +S L
Sbjct: 611 AGHGYSLFL 619
Score = 111 (44.1 bits), Expect = 7.0e-14, Sum P(2) = 7.0e-14
Identities = 33/117 (28%), Positives = 54/117 (46%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLP-PELFGCPAGANSRWLDIACGHEHTA 75
+ +Y+WG N +GQ ++ + P + + P A R L +ACG EHT
Sbjct: 106 VTESGVVYMWGENAAGQCA-VANQQYVSEPSPVSISDSETSPLLA-VRILQLACGEEHTL 163
Query: 76 AVASDGTLFTWGANEFGQLG-DGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAE 131
A++ ++ WG QLG T P+KV+ L V ++CGA + A+ +
Sbjct: 164 ALSISREIWAWGTG--CQLGLITTTFPVTKPQKVEHLAGRVVLQVACGAFHSLALVQ 218
Score = 107 (42.7 bits), Expect = 1.8e-13, Sum P(2) = 1.8e-13
Identities = 36/133 (27%), Positives = 56/133 (42%)
Query: 67 IACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEF-------VKSI 119
+A G H+ AV G ++ WG N GQ ++ P V SE + +
Sbjct: 96 VATGSFHSGAVTESGVVYMWGENAAGQCAVANQQYVSEPSPVSISDSETSPLLAVRILQL 155
Query: 120 SCGAHCTAAIAEPRENDGTISTSRLWVWGQN-Q-G---SNFP--RLFWGAFTPNTIICQV 172
+CG T A++ RE +W WG Q G + FP + ++ QV
Sbjct: 156 ACGEEHTLALSISRE---------IWAWGTGCQLGLITTTFPVTKPQKVEHLAGRVVLQV 206
Query: 173 SCGSVHVVALSEC 185
+CG+ H +AL +C
Sbjct: 207 ACGAFHSLALVQC 219
Score = 82 (33.9 bits), Expect = 7.0e-11, Sum P(2) = 7.0e-11
Identities = 51/211 (24%), Positives = 84/211 (39%)
Query: 49 LPPELFGCPAGANSRWLDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKV 108
L PE P L A G +H + DG +++ FG L +E P
Sbjct: 30 LTPERL--PGWGGKTVLQAALGVKHGVLLTEDGEVYS-----FGTLPWKSEAAEICPS-- 80
Query: 109 KQLQSEFVKSISCGAHCTAAIAEPRENDGTISTSRL-WVWGQNQGSNFP---RLFWGAFT 164
S ++S G H +A + G ++ S + ++WG+N + + +
Sbjct: 81 ----SPLLESALVGHH-VVTVATGSFHSGAVTESGVVYMWGENAAGQCAVANQQYVSEPS 135
Query: 165 PNTI------------ICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPR 212
P +I I Q++CG H +ALS + AWG QLG T + P+
Sbjct: 136 PVSISDSETSPLLAVRILQLACGEEHTLALSISREIWAWGTG--CQLGLITTTFPVTKPQ 193
Query: 213 VIKGYAKFLDEAPELEKITQVSCGEYHSAAV 243
++ A + + QV+CG +HS A+
Sbjct: 194 KVEHLAGRV--------VLQVACGAFHSLAL 216
>UNIPROTKB|F1SI31 [details] [associations]
symbol:ALS2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0051036 "regulation of endosome size" evidence=IEA]
[GO:0048812 "neuron projection morphogenesis" evidence=IEA]
[GO:0043539 "protein serine/threonine kinase activator activity"
evidence=IEA] [GO:0043234 "protein complex" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0035249 "synaptic transmission, glutamatergic" evidence=IEA]
[GO:0032855 "positive regulation of Rac GTPase activity"
evidence=IEA] [GO:0032313 "regulation of Rab GTPase activity"
evidence=IEA] [GO:0031982 "vesicle" evidence=IEA] [GO:0030676 "Rac
guanyl-nucleotide exchange factor activity" evidence=IEA]
[GO:0030027 "lamellipodium" evidence=IEA] [GO:0017137 "Rab GTPase
binding" evidence=IEA] [GO:0017112 "Rab guanyl-nucleotide exchange
factor activity" evidence=IEA] [GO:0016197 "endosomal transport"
evidence=IEA] [GO:0016050 "vesicle organization" evidence=IEA]
[GO:0014069 "postsynaptic density" evidence=IEA] [GO:0008104
"protein localization" evidence=IEA] [GO:0007626 "locomotory
behavior" evidence=IEA] [GO:0007528 "neuromuscular junction
development" evidence=IEA] [GO:0006979 "response to oxidative
stress" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0005813 "centrosome" evidence=IEA] [GO:0005769 "early endosome"
evidence=IEA] [GO:0001881 "receptor recycling" evidence=IEA]
[GO:0001726 "ruffle" evidence=IEA] [GO:0001662 "behavioral fear
response" evidence=IEA] [GO:0005543 "phospholipid binding"
evidence=IEA] InterPro:IPR000219 InterPro:IPR001849 Pfam:PF00621
PROSITE:PS50003 PROSITE:PS50010 SMART:SM00233 INTERPRO:IPR000408
Pfam:PF00415 Pfam:PF02204 GO:GO:0005829 GO:GO:0005813 GO:GO:0043234
GO:GO:0014069 GO:GO:0008104 GO:GO:0006979 GO:GO:0005543
Gene3D:2.30.29.30 InterPro:IPR011993 GO:GO:0007528 GO:GO:0048812
GO:GO:0007626 GO:GO:0035249 GO:GO:0043539 GO:GO:0016197
Gene3D:1.20.900.10 SUPFAM:SSF48065 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 InterPro:IPR003409
InterPro:IPR003123 Pfam:PF02493 SMART:SM00698 PROSITE:PS51205
GeneTree:ENSGT00600000084242 OMA:AKPAIDF GO:GO:0005769
GO:GO:0017112 GO:GO:0030676 GO:GO:0001662 GO:GO:0032855
GO:GO:0001881 GO:GO:0051036 GO:GO:0032313 GO:GO:0016050
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012
Ensembl:ENSSSCT00000017539 Uniprot:F1SI31
Length = 1644
Score = 166 (63.5 bits), Expect = 2.0e-08, P = 2.0e-08
Identities = 60/197 (30%), Positives = 86/197 (43%)
Query: 230 ITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVV---ALDGIFIK 286
+ Q + G H ++E+GEVY++G +S EL P + AL G ++
Sbjct: 43 VLQAALGVKHGVLLTEDGEVYSFGT--------LPWRSEPAELCPSSPILENALVGQYVV 94
Query: 287 DVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNE-SDTYFRNIPILVVPN 345
VA G HS A+T G +Y WG + AGQ + Q + PN S + P+L V
Sbjct: 95 TVATGSFHSGAVTESGVVYMWGENSAGQCAVANQ--QYVPEPNPVSISDSETSPLLAV-R 151
Query: 346 GVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTY-AWYPSPVDWCVGEV-RKLAA 403
+QL ACG HTL I WG Q +T+ P V+ G V ++A
Sbjct: 152 ILQL-ACGEEHTLALSISREIWAWGTGC--QLGLITTTFPVTKPQKVEHLAGRVVLQVAC 208
Query: 404 GGGHSAVLADACSLKEL 420
G HS L ++L
Sbjct: 209 GAFHSLALVQCLPSQDL 225
Score = 153 (58.9 bits), Expect = 7.4e-14, Sum P(2) = 7.4e-14
Identities = 38/89 (42%), Positives = 47/89 (52%)
Query: 230 ITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGD--KELLPRRVVALDGIFIKD 287
+T GE + S EV+TWG G GQLGH GD L P V LDG +
Sbjct: 503 LTPTYSGEADALLPSLRTEVWTWGKGKDGQLGH-----GDVLPRLQPLCVKCLDGKEVIH 557
Query: 288 VACGGVHSCALTSKGALYAWGGSQAGQLG 316
+ GG HS ALT+K +Y+WG + GQLG
Sbjct: 558 LEAGGYHSLALTAKSQVYSWGSNTFGQLG 586
Score = 142 (55.0 bits), Expect = 4.8e-05, Sum P(2) = 4.8e-05
Identities = 61/234 (26%), Positives = 98/234 (41%)
Query: 133 RENDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWG 192
+E +G+ + VW S P G +T T++ Q + G H V L+E G + ++G
Sbjct: 9 QEAEGSKERGLVHVWQAGSCSVTPERLPG-WTGKTVL-QAALGVKHGVLLTEDGEVYSFG 66
Query: 193 YNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTW 252
T P + + L+ A + + V+ G +HS AV+E+G VY W
Sbjct: 67 -----------TLPWRSEPAELCPSSPILENALVGQYVVTVATGSFHSGAVTESGVVYMW 115
Query: 253 GLGSVGQLGHCSLQ----SGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWG 308
G S GQ + Q + L + I +ACG H+ AL+ ++AWG
Sbjct: 116 GENSAGQCAVANQQYVPEPNPVSISDSETSPLLAVRILQLACGEEHTLALSISREIWAWG 175
Query: 309 GSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMR 362
QLGL T +F + + + +L V ACG H+L ++
Sbjct: 176 --TGCQLGL--ITTTFPVTKPQKVEHLAGRVVLQV-------ACGAFHSLALVQ 218
Score = 137 (53.3 bits), Expect = 2.9e-05, P = 2.9e-05
Identities = 49/162 (30%), Positives = 74/162 (45%)
Query: 105 PEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTSRLWVWGQ-NQGSNFPRLFWGAF 163
PE +K + E VK S ++++ + RE + T RL + G +Q S PRL A
Sbjct: 437 PEGLKDSREEQVKQESMQGKKSSSLVDIREEESEGGTRRLSLPGLLSQVS--PRLLRRAA 494
Query: 164 ---TPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKF 220
T ++ G + S + WG + GQLG G LQ P +K
Sbjct: 495 RVKTRTVVLTPTYSGEADALLPSLRTEVWTWGKGKDGQLGHGDVLPRLQ-PLCVK----C 549
Query: 221 LDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGH 262
LD +++ + G YHS A++ +VY+WG + GQLGH
Sbjct: 550 LDG----KEVIHLEAGGYHSLALTAKSQVYSWGSNTFGQLGH 587
Score = 116 (45.9 bits), Expect = 7.4e-14, Sum P(2) = 7.4e-14
Identities = 32/118 (27%), Positives = 53/118 (44%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGA--NSRWLDIACGHEHT 74
+ +Y+WG N +GQ ++ +P+ P + R L +ACG EHT
Sbjct: 106 VTESGVVYMWGENSAGQCAVANQQY---VPEPNPVSISDSETSPLLAVRILQLACGEEHT 162
Query: 75 AAVASDGTLFTWGANEFGQLG-DGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAE 131
A++ ++ WG QLG T P+KV+ L V ++CGA + A+ +
Sbjct: 163 LALSISREIWAWGTG--CQLGLITTTFPVTKPQKVEHLAGRVVLQVACGAFHSLALVQ 218
Score = 107 (42.7 bits), Expect = 6.3e-13, Sum P(2) = 6.3e-13
Identities = 36/133 (27%), Positives = 56/133 (42%)
Query: 67 IACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEF-------VKSI 119
+A G H+ AV G ++ WG N GQ ++ P V SE + +
Sbjct: 96 VATGSFHSGAVTESGVVYMWGENSAGQCAVANQQYVPEPNPVSISDSETSPLLAVRILQL 155
Query: 120 SCGAHCTAAIAEPRENDGTISTSRLWVWGQN-Q-G---SNFP--RLFWGAFTPNTIICQV 172
+CG T A++ RE +W WG Q G + FP + ++ QV
Sbjct: 156 ACGEEHTLALSISRE---------IWAWGTGCQLGLITTTFPVTKPQKVEHLAGRVVLQV 206
Query: 173 SCGSVHVVALSEC 185
+CG+ H +AL +C
Sbjct: 207 ACGAFHSLALVQC 219
Score = 81 (33.6 bits), Expect = 3.1e-10, Sum P(2) = 3.1e-10
Identities = 45/202 (22%), Positives = 81/202 (40%)
Query: 57 PAGANSRWLDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFV 116
P L A G +H + DG ++++G + + E P L ++V
Sbjct: 36 PGWTGKTVLQAALGVKHGVLLTEDGEVYSFGTLPWRS--EPAELCPSSPILENALVGQYV 93
Query: 117 KSISCGAHCTAAIAEPRENDGTISTSRLWVWGQNQGSNFP---RLFWGAFTPNTI----- 168
+++ G+ + A+ E G + ++WG+N + + P +I
Sbjct: 94 VTVATGSFHSGAVTE----SGVV-----YMWGENSAGQCAVANQQYVPEPNPVSISDSET 144
Query: 169 -------ICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFL 221
I Q++CG H +ALS + AWG QLG T + P+ ++ A +
Sbjct: 145 SPLLAVRILQLACGEEHTLALSISREIWAWGTG--CQLGLITTTFPVTKPQKVEHLAGRV 202
Query: 222 DEAPELEKITQVSCGEYHSAAV 243
+ QV+CG +HS A+
Sbjct: 203 --------VLQVACGAFHSLAL 216
Score = 73 (30.8 bits), Expect = 1.9e-05, Sum P(2) = 1.9e-05
Identities = 55/218 (25%), Positives = 87/218 (39%)
Query: 166 NTIICQVSCGS---VHVVALSECGLLQAWGY-NEYGQLGRGITCE-GLQGPRVIKGYAKF 220
N+++ VSC S V V A E G L N Y + CE G Q G +
Sbjct: 387 NSLV--VSCASAVGVRVAATYEAGALSLKKVMNFYST----VPCEPGAQAGSSSMG-PEG 439
Query: 221 LDEAPELEKITQVSC-GEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRV-V 278
L ++ E E++ Q S G+ S+ V E G + G S S LL R V
Sbjct: 440 LKDSRE-EQVKQESMQGKKSSSLVDIREEESEGGTRRLSLPGLLSQVS--PRLLRRAARV 496
Query: 279 ALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNI 338
+ + G + + + ++ WG + GQLG G ++P + +
Sbjct: 497 KTRTVVLTPTYSGEADALLPSLRTEVWTWGKGKDGQLGHG------DVLPRLQPLCVKCL 550
Query: 339 PILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQ 376
V + L A G+ H+L +++ WG N++GQ
Sbjct: 551 DGKEV---IHLEAGGY-HSLALTAKSQVYSWGSNTFGQ 584
Score = 42 (19.8 bits), Expect = 4.8e-05, Sum P(2) = 4.8e-05
Identities = 16/44 (36%), Positives = 17/44 (38%)
Query: 369 WGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVL 411
WG GQ + P V G EV L AGG HS L
Sbjct: 525 WGKGKDGQLGHGDVLPRLQPLCVKCLDGKEVIHLEAGGYHSLAL 568
>UNIPROTKB|F1MDF3 [details] [associations]
symbol:ALS2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0051036 "regulation of endosome size" evidence=IEA]
[GO:0048812 "neuron projection morphogenesis" evidence=IEA]
[GO:0043539 "protein serine/threonine kinase activator activity"
evidence=IEA] [GO:0043234 "protein complex" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0035249 "synaptic transmission, glutamatergic" evidence=IEA]
[GO:0032855 "positive regulation of Rac GTPase activity"
evidence=IEA] [GO:0032313 "regulation of Rab GTPase activity"
evidence=IEA] [GO:0031982 "vesicle" evidence=IEA] [GO:0030676 "Rac
guanyl-nucleotide exchange factor activity" evidence=IEA]
[GO:0030027 "lamellipodium" evidence=IEA] [GO:0017137 "Rab GTPase
binding" evidence=IEA] [GO:0017112 "Rab guanyl-nucleotide exchange
factor activity" evidence=IEA] [GO:0016197 "endosomal transport"
evidence=IEA] [GO:0016050 "vesicle organization" evidence=IEA]
[GO:0014069 "postsynaptic density" evidence=IEA] [GO:0008104
"protein localization" evidence=IEA] [GO:0007626 "locomotory
behavior" evidence=IEA] [GO:0007528 "neuromuscular junction
development" evidence=IEA] [GO:0006979 "response to oxidative
stress" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0005813 "centrosome" evidence=IEA] [GO:0005769 "early endosome"
evidence=IEA] [GO:0001881 "receptor recycling" evidence=IEA]
[GO:0001726 "ruffle" evidence=IEA] [GO:0001662 "behavioral fear
response" evidence=IEA] [GO:0005543 "phospholipid binding"
evidence=IEA] InterPro:IPR000219 InterPro:IPR001849 Pfam:PF00621
PROSITE:PS50010 SMART:SM00233 INTERPRO:IPR000408 Pfam:PF00415
Pfam:PF02204 GO:GO:0005829 GO:GO:0005813 GO:GO:0043234
GO:GO:0014069 GO:GO:0008104 GO:GO:0006979 GO:GO:0005543
Gene3D:2.30.29.30 InterPro:IPR011993 GO:GO:0007528 GO:GO:0048812
GO:GO:0007626 GO:GO:0035249 GO:GO:0043539 GO:GO:0016197
Gene3D:1.20.900.10 SUPFAM:SSF48065 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 InterPro:IPR003409
InterPro:IPR003123 Pfam:PF02493 SMART:SM00698 PROSITE:PS51205
GeneTree:ENSGT00600000084242 OMA:AKPAIDF GO:GO:0005769
GO:GO:0017112 GO:GO:0030676 GO:GO:0001662 GO:GO:0032855
GO:GO:0001881 GO:GO:0051036 GO:GO:0032313 GO:GO:0016050
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 EMBL:DAAA02005594
EMBL:DAAA02005595 EMBL:DAAA02005596 IPI:IPI00905690
Ensembl:ENSBTAT00000060956 Uniprot:F1MDF3
Length = 1661
Score = 154 (59.3 bits), Expect = 9.5e-14, Sum P(2) = 9.5e-14
Identities = 38/89 (42%), Positives = 47/89 (52%)
Query: 230 ITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGD--KELLPRRVVALDGIFIKD 287
+T GE + S EV+TWG G GQLGH GD L P V LDG +
Sbjct: 513 LTPTYSGEADALLPSLRTEVWTWGKGKEGQLGH-----GDVLPRLQPLCVKCLDGKEVIH 567
Query: 288 VACGGVHSCALTSKGALYAWGGSQAGQLG 316
+ GG HS ALT+K +Y+WG + GQLG
Sbjct: 568 LEAGGYHSLALTAKSQVYSWGSNTFGQLG 596
Score = 148 (57.2 bits), Expect = 3.9e-08, Sum P(2) = 3.9e-08
Identities = 53/201 (26%), Positives = 88/201 (43%)
Query: 105 PEKVKQLQSEFVKSISCGAHCTAAIAEP-RENDGTISTSRLWVWGQNQGSNFPR--LFWG 161
PE++ + V + G + E + +DG + + W P +
Sbjct: 32 PERLPGWGGKTVLHAALGVKHGVLLTEVFKPSDGEVYSFGTLPWRSEPAETCPSNPILES 91
Query: 162 AFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFL 221
A ++ V+ GS H A+++ G++ WG N GQ C P V + +
Sbjct: 92 ALVGQYVVT-VATGSFHTGAVTDSGVVYMWGENSAGQ------CAVANQPYVPEPNPVSI 144
Query: 222 DEA---PELE-KITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRV 277
++ P L +I Q++CGE H+ A+S + E++ WG G QLG + + P++V
Sbjct: 145 SDSETSPLLAVRILQLACGEEHTLALSLSREIWAWGTGC--QLG--LITTTFPVTKPQKV 200
Query: 278 VALDGIFIKDVACGGVHSCAL 298
L G + VACG HS AL
Sbjct: 201 EHLAGRVVLQVACGAFHSLAL 221
Score = 143 (55.4 bits), Expect = 6.5e-06, P = 6.5e-06
Identities = 54/179 (30%), Positives = 75/179 (41%)
Query: 248 EVYTWGLGSVGQLGHCSLQSGDKELLPRRVV---ALDGIFIKDVACGGVHSCALTSKGAL 304
EV+ G V G +S E P + AL G ++ VA G H+ A+T G +
Sbjct: 58 EVFKPSDGEVYSFGTLPWRSEPAETCPSNPILESALVGQYVVTVATGSFHTGAVTDSGVV 117
Query: 305 YAWGGSQAGQLGLGPQTRSFSLIPNE-SDTYFRNIPILVVPNGVQLVACGHSHTLVYMRD 363
Y WG + AGQ + Q + PN S + P+L V +QL ACG HTL
Sbjct: 118 YMWGENSAGQCAVANQP--YVPEPNPVSISDSETSPLLAV-RILQL-ACGEEHTLALSLS 173
Query: 364 GRIHGWGYNSYGQAANEKSTY-AWYPSPVDWCVGEV-RKLAAGGGHSAVLADACSLKEL 420
I WG Q +T+ P V+ G V ++A G HS L ++L
Sbjct: 174 REIWAWGTGC--QLGLITTTFPVTKPQKVEHLAGRVVLQVACGAFHSLALVQCLPSQDL 230
Score = 136 (52.9 bits), Expect = 8.5e-12, Sum P(2) = 8.5e-12
Identities = 56/198 (28%), Positives = 89/198 (44%)
Query: 105 PEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTSRLWVWGQ-NQGSNFPRLFWGAF 163
PE +K + E VK S ++++ + RE + + RL + G +Q S PRL A
Sbjct: 447 PEGLKDSREEQVKQESMQGKKSSSLVDIREEESEGGSRRLSLPGLLSQVS--PRLLRKAA 504
Query: 164 ---TPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKF 220
T ++ G + S + WG + GQLG G LQ P +K
Sbjct: 505 RVKTRTVVLTPTYSGEADALLPSLRTEVWTWGKGKEGQLGHGDVLPRLQ-PLCVK----C 559
Query: 221 LDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVAL 280
LD +++ + G YHS A++ +VY+WG + GQLGH + L +V +
Sbjct: 560 LDG----KEVIHLEAGGYHSLALTAKSQVYSWGSNTFGQLGHSDFPTTVPRLA--KVNSE 613
Query: 281 DGIFIKDVACGGVHSCAL 298
+G++ VA G +S L
Sbjct: 614 NGVW--SVAAGQDYSLFL 629
Score = 114 (45.2 bits), Expect = 9.5e-14, Sum P(2) = 9.5e-14
Identities = 33/112 (29%), Positives = 51/112 (45%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGA--NSRWLDIACGHEHTAAVASD 80
+Y+WG N +GQ Q +P+ P + R L +ACG EHT A++
Sbjct: 117 VYMWGENSAGQCAVAN---QPYVPEPNPVSISDSETSPLLAVRILQLACGEEHTLALSLS 173
Query: 81 GTLFTWGANEFGQLG-DGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAE 131
++ WG QLG T P+KV+ L V ++CGA + A+ +
Sbjct: 174 REIWAWGTG--CQLGLITTTFPVTKPQKVEHLAGRVVLQVACGAFHSLALVQ 223
Score = 108 (43.1 bits), Expect = 4.0e-13, Sum P(2) = 4.0e-13
Identities = 37/133 (27%), Positives = 55/133 (41%)
Query: 67 IACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEF-------VKSI 119
+A G HT AV G ++ WG N GQ + P V SE + +
Sbjct: 101 VATGSFHTGAVTDSGVVYMWGENSAGQCAVANQPYVPEPNPVSISDSETSPLLAVRILQL 160
Query: 120 SCGAHCTAAIAEPRENDGTISTSRLWVWGQN-Q-G---SNFP--RLFWGAFTPNTIICQV 172
+CG T A++ RE +W WG Q G + FP + ++ QV
Sbjct: 161 ACGEEHTLALSLSRE---------IWAWGTGCQLGLITTTFPVTKPQKVEHLAGRVVLQV 211
Query: 173 SCGSVHVVALSEC 185
+CG+ H +AL +C
Sbjct: 212 ACGAFHSLALVQC 224
Score = 66 (28.3 bits), Expect = 3.9e-08, Sum P(2) = 3.9e-08
Identities = 29/111 (26%), Positives = 49/111 (44%)
Query: 304 LYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRD 363
++ WG + GQLG G ++P + + V + L A G+ H+L
Sbjct: 532 VWTWGKGKEGQLGHG------DVLPRLQPLCVKCLDGKEV---IHLEAGGY-HSLALTAK 581
Query: 364 GRIHGWGYNSYGQAANEK-STYAWYPSPVDWCVGEVRKLAAGGGHSAVLAD 413
+++ WG N++GQ + T + V+ G V +AAG +S L D
Sbjct: 582 SQVYSWGSNTFGQLGHSDFPTTVPRLAKVNSENG-VWSVAAGQDYSLFLVD 631
>UNIPROTKB|E1BRZ2 [details] [associations]
symbol:NEK8 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0004674 "protein serine/threonine kinase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0072372
"primary cilium" evidence=IEA] InterPro:IPR000719
InterPro:IPR002290 InterPro:IPR008271 InterPro:IPR011009
InterPro:IPR017441 Pfam:PF00069 PROSITE:PS00107 PROSITE:PS00108
PROSITE:PS50011 SMART:SM00220 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005524 SUPFAM:SSF56112 GO:GO:0004674 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0072372 PRINTS:PR00633
PROSITE:PS50012 GeneTree:ENSGT00700000104137 OMA:EREVFAW
EMBL:AADN02025864 IPI:IPI00574044 ProteinModelPortal:E1BRZ2
Ensembl:ENSGALT00000006340 Uniprot:E1BRZ2
Length = 689
Score = 209 (78.6 bits), Expect = 1.2e-13, P = 1.2e-13
Identities = 82/303 (27%), Positives = 128/303 (42%)
Query: 67 IACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCT 126
++CG TA + G + T+G+ G LG G P+ V+ L + ++CGA
Sbjct: 402 VSCGDLFTACLTDRGIIMTFGSGSNGCLGHGNFTDVSQPKIVEALLGYEMVQVACGASHV 461
Query: 127 AAIAEPREND--GTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSE 184
A++ RE G RL + G + N P+ A P +V CG + L+
Sbjct: 462 LAVSNEREVFAWGRGDNGRLGL-GTLECHNSPQQV--AVPPEHEAQRVICGIDSSMVLTV 518
Query: 185 CGLLQAWGYNEYGQLG--RGITCEGLQGPRVIKGYAKFL--DEAP-ELEKITQVSCGEYH 239
+ A G N +LG R + E ++ F AP E + G H
Sbjct: 519 NNQILACGSNRCNKLGLDRISSAEEPSPEDQVEEATVFTCAQSAPLNQEPVVCADIGTAH 578
Query: 240 SAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALT 299
SAAV+ +G+ YT+G GQLG S ++ +P VV L + + VACG + A+
Sbjct: 579 SAAVTASGQCYTFGSNQHGQLGTNSCRNSR---VPHLVVGLRAMKVTVVACGDAFTVAIG 635
Query: 300 SKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLV 359
+ G + WG G+LG + +T+ P V VAC H +TL+
Sbjct: 636 ADGEVCTWGKGARGRLGRKDEETGMPRPVQLEETH---------PYVVTSVACCHGNTLL 686
Query: 360 YMR 362
++
Sbjct: 687 AVK 689
Score = 199 (75.1 bits), Expect = 1.6e-12, P = 1.6e-12
Identities = 90/352 (25%), Positives = 144/352 (40%)
Query: 61 NSRWLDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEG---RKHPEKVKQL---QSE 114
N+ + ++ G A V G L W A G G + G + P+ V + QS
Sbjct: 337 NTEVVQVSAGRTQKAGVTKSGRLIMWEAPPMGTAGGPSLPGATEQLQPQFVSRFLEGQSG 396
Query: 115 F-VKSISCGAHCTAAIAEPRENDGTISTSRLWVWGQNQGSNF--PRLFWGAFTPNTIICQ 171
+K +SCG TA + + R T + G ++ P++ + Q
Sbjct: 397 VTIKHVSCGDLFTACLTD-RGIIMTFGSGSNGCLGHGNFTDVSQPKIVEALLGYEMV--Q 453
Query: 172 VSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKIT 231
V+CG+ HV+A+S + AWG + G+LG G T E P+ + P +
Sbjct: 454 VACGASHVLAVSNEREVFAWGRGDNGRLGLG-TLECHNSPQQVA--------VPPEHEAQ 504
Query: 232 QVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFI------ 285
+V CG S ++ N ++ G +LG + S + E P V +F
Sbjct: 505 RVICGIDSSMVLTVNNQILACGSNRCNKLGLDRISSAE-EPSPEDQVEEATVFTCAQSAP 563
Query: 286 ---KDVAC---GGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIP 339
+ V C G HS A+T+ G Y +G +Q GQLG R+ S +P+ +
Sbjct: 564 LNQEPVVCADIGTAHSAAVTASGQCYTFGSNQHGQLGTN-SCRN-SRVPH--------LV 613
Query: 340 ILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPV 391
+ + V +VACG + T+ DG + WG + G+ K P PV
Sbjct: 614 VGLRAMKVTVVACGDAFTVAIGADGEVCTWGKGARGRLGR-KDEETGMPRPV 664
Score = 197 (74.4 bits), Expect = 2.6e-12, P = 2.6e-12
Identities = 71/232 (30%), Positives = 108/232 (46%)
Query: 166 NTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGR----GITCEGLQGPRVIKGYAKFL 221
NT + QVS G +++ G L W G G G T E LQ P+ + ++FL
Sbjct: 337 NTEVVQVSAGRTQKAGVTKSGRLIMWEAPPMGTAGGPSLPGAT-EQLQ-PQFV---SRFL 391
Query: 222 DEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALD 281
E I VSCG+ +A +++ G + T+G GS G LGH + + P+ V AL
Sbjct: 392 -EGQSGVTIKHVSCGDLFTACLTDRGIIMTFGSGSNGCLGHGNFTDVSQ---PKIVEALL 447
Query: 282 GIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPIL 341
G + VACG H A++++ ++AWG G+LGLG T P + +
Sbjct: 448 GYEMVQVACGASHVLAVSNEREVFAWGRGDNGRLGLG--TLECHNSPQQ---------VA 496
Query: 342 VVP-NGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVD 392
V P + Q V CG ++V + +I G N + ++ + A PSP D
Sbjct: 497 VPPEHEAQRVICGIDSSMVLTVNNQILACGSNRCNKLGLDRISSAEEPSPED 548
>UNIPROTKB|F1RJL0 [details] [associations]
symbol:WBSCR16 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005739 "mitochondrion" evidence=IEA]
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005739 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 GeneTree:ENSGT00700000104312 OMA:MVTLAKS
EMBL:FP326664 RefSeq:XP_003354559.2 Ensembl:ENSSSCT00000008468
GeneID:100513850 KEGG:ssc:100513850 Uniprot:F1RJL0
Length = 470
Score = 201 (75.8 bits), Expect = 1.3e-13, Sum P(2) = 1.3e-13
Identities = 79/304 (25%), Positives = 138/304 (45%)
Query: 27 GYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT-LFT 85
G++ S + +G E L P +P L P ++ L ++CG H+ V +DG +F+
Sbjct: 149 GFHRSRKDKTRGYEYVLE-PSPVPLPLHR-PQ--ETQVLQVSCGRAHSL-VLTDGEGVFS 203
Query: 86 WGANEFGQLGDGTEEGRKHPE--KVKQLQSEF---VKSISCGAHCTAAIAEPRE--NDGT 138
G N +GQ G E + E KV ++Q +F V ++CG + + + E + G
Sbjct: 204 MGNNSYGQCGRKVVENEIYSESHKVHRMQ-DFDGQVVQVACGQDHSLFLTDKGEVYSCGW 262
Query: 139 ISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQ 198
+ + + G ++ P G ++ QV+ +A+S G L WG +EY Q
Sbjct: 263 GADGQTGL-GHYNITSAPTKLGGDLAGVNVV-QVATYGDCCLAVSADGSLFGWGNSEYLQ 320
Query: 199 LGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVG 258
L + PR + F + ++ Q +CG A ++ G V+ WG G +G
Sbjct: 321 LASVTDSTQVNVPRCLP----FSG----VGQVKQAACGGTGCAVLNGEGHVFVWGYGILG 372
Query: 259 QLGHCSLQSGDKELLPRRVVALDG----IFIKDVACGGVHSCALTSKGALYAWGGSQAGQ 314
+ G +++ E++P + L + + + CG H ALT +G L+ WG + G
Sbjct: 373 K-GPNLVETALPEMIPPTLFGLTELNPEVRVSRIRCGLSHFAALTDRGELFVWGKNIRGC 431
Query: 315 LGLG 318
LG+G
Sbjct: 432 LGIG 435
Score = 199 (75.1 bits), Expect = 2.3e-13, Sum P(2) = 2.3e-13
Identities = 63/216 (29%), Positives = 103/216 (47%)
Query: 167 TIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPE 226
T + QVSCG H + L++ + + G N YGQ GR + I + + +
Sbjct: 180 TQVLQVSCGRAHSLVLTDGEGVFSMGNNSYGQCGRKVV------ENEIYSESHKVHRMQD 233
Query: 227 LE-KITQVSCGEYHSAAVSENGEVYTWGLGSVGQ--LGHCSLQSGDKELLPRRVVALDGI 283
+ ++ QV+CG+ HS +++ GEVY+ G G+ GQ LGH ++ S +L L G+
Sbjct: 234 FDGQVVQVACGQDHSLFLTDKGEVYSCGWGADGQTGLGHYNITSAPTKLGGD----LAGV 289
Query: 284 FIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVV 343
+ VA G A+++ G+L+ WG S+ QL + + +P R +P V
Sbjct: 290 NVVQVATYGDCCLAVSADGSLFGWGNSEYLQLASVTDSTQVN-VP-------RCLPFSGV 341
Query: 344 PNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAAN 379
V+ ACG + V +G + WGY G+ N
Sbjct: 342 GQ-VKQAACGGTGCAVLNGEGHVFVWGYGILGKGPN 376
Score = 186 (70.5 bits), Expect = 6.9e-12, Sum P(2) = 6.9e-12
Identities = 60/191 (31%), Positives = 90/191 (47%)
Query: 225 PELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSG--DKELLPRRVVALDG 282
P+ ++ QVSCG HS +++ V++ G S GQ G +++ + R+ DG
Sbjct: 177 PQETQVLQVSCGRAHSLVLTDGEGVFSMGNNSYGQCGRKVVENEIYSESHKVHRMQDFDG 236
Query: 283 IFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILV 342
++ VACG HS LT KG +Y+ G GQ GLG + + P + +
Sbjct: 237 QVVQ-VACGQDHSLFLTDKGEVYSCGWGADGQTGLGHY--NITSAPTKLGGDLAGV---- 289
Query: 343 VPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAAN-EKSTYAWYPSPVDWC-VGEVRK 400
N VQ+ G L DG + GWG + Y Q A+ ST P + + VG+V++
Sbjct: 290 --NVVQVATYGDC-CLAVSADGSLFGWGNSEYLQLASVTDSTQVNVPRCLPFSGVGQVKQ 346
Query: 401 LAAGGGHSAVL 411
A GG AVL
Sbjct: 347 AACGGTGCAVL 357
Score = 183 (69.5 bits), Expect = 1.5e-11, Sum P(2) = 1.5e-11
Identities = 74/282 (26%), Positives = 121/282 (42%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ G N GQ GRK E ++ + + + + +ACG +H+ + G
Sbjct: 201 VFSMGNNSYGQCGRKVVENEIYSESHKVHRM----QDFDGQVVQVACGQDHSLFLTDKGE 256
Query: 83 LFT--WGANEFGQLGDGTEEGRKHPEKVK-QLQSEFVKSISCGAHCTAAIAEPRENDGTI 139
+++ WGA+ GQ G G P K+ L V ++ C A++ G
Sbjct: 257 VYSCGWGAD--GQTGLGHYNITSAPTKLGGDLAGVNVVQVATYGDCCLAVSADGSLFGWG 314
Query: 140 STSRLWVWGQNQGS--NFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYG 197
++ L + + N PR F+ + Q +CG L+ G + WGY G
Sbjct: 315 NSEYLQLASVTDSTQVNVPRCL--PFSGVGQVKQAACGGTGCAVLNGEGHVFVWGY---G 369
Query: 198 QLGRGITCEGLQGPRVIKGYAKFLDEA-PELEKITQVSCGEYHSAAVSENGEVYTWGLGS 256
LG+G P +I L E PE+ +++++ CG H AA+++ GE++ WG
Sbjct: 370 ILGKGPNLVETALPEMIPPTLFGLTELNPEV-RVSRIRCGLSHFAALTDRGELFVWGKNI 428
Query: 257 VGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCAL 298
G LG L+ + P RV + G + DVACG H L
Sbjct: 429 RGCLGIGRLED---QYFPWRVT-MPGEPV-DVACGVDHMVTL 465
Score = 158 (60.7 bits), Expect = 9.9e-09, Sum P(2) = 9.9e-09
Identities = 66/247 (26%), Positives = 97/247 (39%)
Query: 169 ICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELE 228
+ QV+CG H + L++ G + + G+ GQ G G P + G +L
Sbjct: 238 VVQVACGQDHSLFLTDKGEVYSCGWGADGQTGLG-HYNITSAPTKLGG---------DLA 287
Query: 229 KITQVSCGEYHSA--AVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIF-I 285
+ V Y AVS +G ++ WG QL S+ + +PR + G+ +
Sbjct: 288 GVNVVQVATYGDCCLAVSADGSLFGWGNSEYLQLA--SVTDSTQVNVPR-CLPFSGVGQV 344
Query: 286 KDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPN 345
K ACGG L +G ++ WG G LG GP +L T F + L
Sbjct: 345 KQAACGGTGCAVLNGEGHVFVWG---YGILGKGPNLVETALPEMIPPTLF-GLTELNPEV 400
Query: 346 GVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGG 405
V + CG SH G + WG N G + ++P V GE +A G
Sbjct: 401 RVSRIRCGLSHFAALTDRGELFVWGKNIRGCLGIGRLEDQYFPWRVTM-PGEPVDVACGV 459
Query: 406 GHSAVLA 412
H LA
Sbjct: 460 DHMVTLA 466
Score = 135 (52.6 bits), Expect = 3.6e-06, Sum P(2) = 3.6e-06
Identities = 55/196 (28%), Positives = 83/196 (42%)
Query: 20 KSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVAS 79
K +Y G+ GQTG G P +L +L AG N + +A + AV++
Sbjct: 254 KGEVYSCGWGADGQTGL-GHYNITSAPTKLGGDL----AGVNV--VQVATYGDCCLAVSA 306
Query: 80 DGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEF-VKSISCGAHCTAAIAEPRENDGT 138
DG+LF WG +E+ QL T+ + + + VK +CG A + +G
Sbjct: 307 DGSLFGWGNSEYLQLASVTDSTQVNVPRCLPFSGVGQVKQAACGGTGCAVL----NGEGH 362
Query: 139 ISTSRLWVWG-QNQGSNF----------PRLFW-GAFTPNTIICQVSCGSVHVVALSECG 186
+ +W +G +G N P LF P + ++ CG H AL++ G
Sbjct: 363 VF---VWGYGILGKGPNLVETALPEMIPPTLFGLTELNPEVRVSRIRCGLSHFAALTDRG 419
Query: 187 LLQAWGYNEYGQLGRG 202
L WG N G LG G
Sbjct: 420 ELFVWGKNIRGCLGIG 435
Score = 47 (21.6 bits), Expect = 1.3e-13, Sum P(2) = 1.3e-13
Identities = 11/31 (35%), Positives = 16/31 (51%)
Query: 5 EIIGETARPVDNIPAKSAIYVWGYNHSGQTG 35
+ +GE A D I +VWG++ SG G
Sbjct: 55 QYVGERAARADRI------FVWGFSFSGALG 79
>UNIPROTKB|E2RSG1 [details] [associations]
symbol:ALS2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0035023 "regulation of Rho protein signal
transduction" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0005543 "phospholipid binding" evidence=IEA]
[GO:0005089 "Rho guanyl-nucleotide exchange factor activity"
evidence=IEA] InterPro:IPR000219 InterPro:IPR001849 Pfam:PF00621
PROSITE:PS50010 SMART:SM00233 INTERPRO:IPR000408 Pfam:PF00415
Pfam:PF02204 GO:GO:0005543 Gene3D:2.30.29.30 InterPro:IPR011993
GO:GO:0005622 GO:GO:0005089 Gene3D:1.20.900.10 SUPFAM:SSF48065
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0035023
InterPro:IPR003409 InterPro:IPR003123 Pfam:PF02493 SMART:SM00698
PROSITE:PS51205 GeneTree:ENSGT00600000084242 KO:K04575 OMA:AKPAIDF
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 EMBL:AAEX03018021
RefSeq:XP_003640234.1 Ensembl:ENSCAFT00000019642 GeneID:100856109
KEGG:cfa:100856109 Uniprot:E2RSG1
Length = 1656
Score = 156 (60.0 bits), Expect = 2.5e-07, P = 2.5e-07
Identities = 56/196 (28%), Positives = 81/196 (41%)
Query: 230 ITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVV---ALDGIFIK 286
+ Q + G H ++E+GEVY++G +S E+ P + AL G F+
Sbjct: 43 VLQAALGVKHGVLLTEDGEVYSFGT--------LPWRSEPAEICPSCPILENALIGQFVV 94
Query: 287 DVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNG 346
VA G H+ A+T G Y WG + AGQ + Q + PN L+
Sbjct: 95 TVASGSFHNGAVTESGVAYMWGENSAGQCAVANQ--QYVPEPNPVSISDSETSSLLAVRI 152
Query: 347 VQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTY-AWYPSPVDWCVGEV-RKLAAG 404
+QL ACG HTL I WG Q +T+ P V+ G V ++A G
Sbjct: 153 LQL-ACGEEHTLALSISREIWAWGTGC--QLGLITTTFPVTKPQKVEHLAGRVVLQVACG 209
Query: 405 GGHSAVLADACSLKEL 420
HS L ++L
Sbjct: 210 AFHSLALVQCLPSQDL 225
Score = 152 (58.6 bits), Expect = 1.5e-13, Sum P(2) = 1.5e-13
Identities = 38/89 (42%), Positives = 47/89 (52%)
Query: 230 ITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGD--KELLPRRVVALDGIFIKD 287
+T GE + S EV+TWG G GQLGH GD L P V LDG +
Sbjct: 508 LTPTYSGEADALLPSLRTEVWTWGKGKEGQLGH-----GDVLPRLQPLCVKCLDGKEVIY 562
Query: 288 VACGGVHSCALTSKGALYAWGGSQAGQLG 316
+ GG HS ALT+K +Y+WG + GQLG
Sbjct: 563 LEAGGYHSLALTAKSQVYSWGSNTFGQLG 591
Score = 144 (55.7 bits), Expect = 5.0e-06, P = 5.0e-06
Identities = 85/319 (26%), Positives = 132/319 (41%)
Query: 5 EIIGETARP-VDNIPA---KSAI--YVWGYN-HS----GQTGRKGRERQLRIPKQLPPEL 53
EI+G T P NIP+ A+ Y+ + HS + G+K Q + + +P L
Sbjct: 322 EIMGTTEIPSAQNIPSYPDTQAVNEYMQKLSDHSVRDNSENGKKPMPSQPLVEEAVP-NL 380
Query: 54 FGCPAGANSRW--LDIACGHE---HTAAVASDGTLFTWGANEFGQLGD---GTEEGRKH- 104
P + S L ++C AA G L F GT+ G
Sbjct: 381 HSPPTTSTSALNSLVVSCASAVGVRVAATYEAGALSLKKVMNFYSTAPCEPGTQAGSSSI 440
Query: 105 -PEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTSRLWVWGQ-NQGSNFPRLFWGA 162
PE +K + E VK S ++++ + RE + + RL + G +Q S PRL A
Sbjct: 441 GPEGLKDSREEQVKQESMQGKKSSSLVDIREEESEGGSRRLSLPGLLSQVS--PRLLRKA 498
Query: 163 F---TPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAK 219
T ++ G + S + WG + GQLG G LQ P +K
Sbjct: 499 ARVKTRTVVLTPTYSGEADALLPSLRTEVWTWGKGKEGQLGHGDVLPRLQ-PLCVK---- 553
Query: 220 FLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVA 279
LD +++ + G YHS A++ +VY+WG + GQLGH + L +V +
Sbjct: 554 CLDG----KEVIYLEAGGYHSLALTAKSQVYSWGSNTFGQLGHYDFPTTVPRLA--KVSS 607
Query: 280 LDGIFIKDVACGGVHSCAL 298
+G++ VA G +S L
Sbjct: 608 ENGVW--SVAAGQDYSLFL 624
Score = 137 (53.3 bits), Expect = 0.00076, Sum P(3) = 0.00076
Identities = 40/130 (30%), Positives = 63/130 (48%)
Query: 169 ICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELE 228
+ V+ GS H A++E G+ WG N GQ + + P + + +
Sbjct: 93 VVTVASGSFHNGAVTESGVAYMWGENSAGQCAVA-NQQYVPEPNPVS-ISDSETSSLLAV 150
Query: 229 KITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDV 288
+I Q++CGE H+ A+S + E++ WG G QLG + + P++V L G + V
Sbjct: 151 RILQLACGEEHTLALSISREIWAWGTGC--QLG--LITTTFPVTKPQKVEHLAGRVVLQV 206
Query: 289 ACGGVHSCAL 298
ACG HS AL
Sbjct: 207 ACGAFHSLAL 216
Score = 114 (45.2 bits), Expect = 1.5e-13, Sum P(2) = 1.5e-13
Identities = 32/111 (28%), Positives = 52/111 (46%)
Query: 24 YVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGA--NSRWLDIACGHEHTAAVASDG 81
Y+WG N +GQ ++ +P+ P + + R L +ACG EHT A++
Sbjct: 113 YMWGENSAGQCAVANQQY---VPEPNPVSISDSETSSLLAVRILQLACGEEHTLALSISR 169
Query: 82 TLFTWGANEFGQLG-DGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAE 131
++ WG QLG T P+KV+ L V ++CGA + A+ +
Sbjct: 170 EIWAWGTG--CQLGLITTTFPVTKPQKVEHLAGRVVLQVACGAFHSLALVQ 218
Score = 108 (43.1 bits), Expect = 6.5e-13, Sum P(2) = 6.5e-13
Identities = 37/127 (29%), Positives = 53/127 (41%)
Query: 67 IACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCT 126
+A G H AV G + WG N GQ ++ P V SE S+
Sbjct: 96 VASGSFHNGAVTESGVAYMWGENSAGQCAVANQQYVPEPNPVSISDSE-TSSLLAVRILQ 154
Query: 127 AAIAEPRENDGTISTSR-LWVWGQN-Q-G---SNFP--RLFWGAFTPNTIICQVSCGSVH 178
A E E+ +S SR +W WG Q G + FP + ++ QV+CG+ H
Sbjct: 155 LACGE--EHTLALSISREIWAWGTGCQLGLITTTFPVTKPQKVEHLAGRVVLQVACGAFH 212
Query: 179 VVALSEC 185
+AL +C
Sbjct: 213 SLALVQC 219
Score = 81 (33.6 bits), Expect = 4.0e-10, Sum P(2) = 4.0e-10
Identities = 46/193 (23%), Positives = 77/193 (39%)
Query: 57 PAGANSRWLDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFV 116
P L A G +H + DG ++++G + + E P L +FV
Sbjct: 36 PGWGGKTVLQAALGVKHGVLLTEDGEVYSFGTLPWRS--EPAEICPSCPILENALIGQFV 93
Query: 117 KSISCGAHCTAAIAEPREND--GTISTSRLWVWGQNQGSN-FPRLFWGAFTPNTI---IC 170
+++ G+ A+ E G S + V Q P + T + + I
Sbjct: 94 VTVASGSFHNGAVTESGVAYMWGENSAGQCAVANQQYVPEPNPVSISDSETSSLLAVRIL 153
Query: 171 QVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKI 230
Q++CG H +ALS + AWG QLG T + P+ ++ A + +
Sbjct: 154 QLACGEEHTLALSISREIWAWGTG--CQLGLITTTFPVTKPQKVEHLAGRV--------V 203
Query: 231 TQVSCGEYHSAAV 243
QV+CG +HS A+
Sbjct: 204 LQVACGAFHSLAL 216
Score = 42 (19.8 bits), Expect = 0.00076, Sum P(3) = 0.00076
Identities = 16/44 (36%), Positives = 17/44 (38%)
Query: 369 WGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVL 411
WG GQ + P V G EV L AGG HS L
Sbjct: 530 WGKGKEGQLGHGDVLPRLQPLCVKCLDGKEVIYLEAGGYHSLAL 573
Score = 37 (18.1 bits), Expect = 0.00076, Sum P(3) = 0.00076
Identities = 6/12 (50%), Positives = 9/12 (75%)
Query: 309 GSQAGQLGLGPQ 320
G+QAG +GP+
Sbjct: 432 GTQAGSSSIGPE 443
>UNIPROTKB|F1NXI7 [details] [associations]
symbol:SERGEF "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0050709 "negative regulation of protein
secretion" evidence=IEA] InterPro:IPR027048 INTERPRO:IPR000408
Pfam:PF00415 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012
GeneTree:ENSGT00700000104160 PANTHER:PTHR22870:SF7
EMBL:AADN02030419 EMBL:AADN02030421 EMBL:AADN02030420
IPI:IPI00587804 Ensembl:ENSGALT00000010065 Uniprot:F1NXI7
Length = 231
Score = 184 (69.8 bits), Expect = 1.6e-13, P = 1.6e-13
Identities = 65/226 (28%), Positives = 100/226 (44%)
Query: 172 VSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKIT 231
++C S H++ + C L+ G N YGQLG G E + P+++K D + + + I
Sbjct: 4 IACHS-HLILRATCVCLK--GANSYGQLGLGHK-EDVLVPQLLK------DVSCKCQDIK 53
Query: 232 QVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACG 291
++ G HSA ++ GE++ G GQLG L + L AL G +++VACG
Sbjct: 54 SIAGGGGHSAVITGAGELFVCGHNKAGQLG---LNHTEDVLCFTLCTALSGFCVQEVACG 110
Query: 292 GVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVA 351
+ L G + + G + GQLG+ PQ LIP + + + G+ A
Sbjct: 111 WDFTIILGRAGLVLSCGSNAFGQLGV-PQISGPCLIPQKIKQSLKEKAV-----GI---A 161
Query: 352 CGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE 397
G H L G + WG G A+ K + PV W E
Sbjct: 162 AGLRHALAATESGLVFQWGT---GMASRAKRVHQGKTLPVFWAAKE 204
Score = 160 (61.4 bits), Expect = 8.9e-10, P = 8.9e-10
Identities = 72/249 (28%), Positives = 108/249 (43%)
Query: 66 DIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHC 125
+IAC H H A+ L GAN +GQLG G H E V L + +K +SC
Sbjct: 3 NIAC-HSHLILRATCVCLK--GANSYGQLGLG------HKEDV--LVPQLLKDVSCKCQD 51
Query: 126 TAAIAEPRENDGTIS-TSRLWVWGQNQ----GSNFPR--LFWGAFTPNTIIC--QVSCGS 176
+IA + I+ L+V G N+ G N L + T + C +V+CG
Sbjct: 52 IKSIAGGGGHSAVITGAGELFVCGHNKAGQLGLNHTEDVLCFTLCTALSGFCVQEVACGW 111
Query: 177 VHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCG 236
+ L GL+ + G N +GQLG + GP +I K ++ + EK ++ G
Sbjct: 112 DFTIILGRAGLVLSCGSNAFGQLG----VPQISGPCLIPQKIK---QSLK-EKAVGIAAG 163
Query: 237 EYHSAAVSENGEVYTWGLGSVGQLGHCSLQS------GDKELLPRRVVALDGIFIKDVAC 290
H+ A +E+G V+ WG G + KE P + L+ + +K VA
Sbjct: 164 LRHALAATESGLVFQWGTGMASRAKRVHQGKTLPVFWAAKE--PCEIKGLEDVKVKRVAA 221
Query: 291 GGVHSCALT 299
G H +LT
Sbjct: 222 GSYHCVSLT 230
Score = 121 (47.7 bits), Expect = 6.9e-05, P = 6.9e-05
Identities = 56/192 (29%), Positives = 78/192 (40%)
Query: 2 DINEIIGETARPVDNIPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGAN 61
DI I G I ++V G+N +GQ G E L C A +
Sbjct: 51 DIKSIAGGGGHSAV-ITGAGELFVCGHNKAGQLGLNHTEDVLCFTL--------CTALSG 101
Query: 62 SRWLDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGR-KHPEKVKQLQSEFVKSIS 120
++ACG + T + G + + G+N FGQLG G P+K+KQ E I+
Sbjct: 102 FCVQEVACGWDFTIILGRAGLVLSCGSNAFGQLGVPQISGPCLIPQKIKQSLKEKAVGIA 161
Query: 121 CGA-HCTAAIAEPREND-GTISTSRLWVWGQNQGSNFPRLFWGAFTPNTI-------ICQ 171
G H AA GT SR +QG P +FW A P I + +
Sbjct: 162 AGLRHALAATESGLVFQWGTGMASR--AKRVHQGKTLP-VFWAAKEPCEIKGLEDVKVKR 218
Query: 172 VSCGSVHVVALS 183
V+ GS H V+L+
Sbjct: 219 VAAGSYHCVSLT 230
>FB|FBgn0002638 [details] [associations]
symbol:Rcc1 "Regulator of chromosome condensation 1 ortholog
(H. sapiens)" species:7227 "Drosophila melanogaster" [GO:0005634
"nucleus" evidence=ISS;NAS;IDA] [GO:0007417 "central nervous system
development" evidence=IDA] [GO:0030261 "chromosome condensation"
evidence=ISS] [GO:0003682 "chromatin binding" evidence=ISS;IDA]
[GO:0007076 "mitotic chromosome condensation" evidence=NAS]
[GO:0005087 "Ran guanyl-nucleotide exchange factor activity"
evidence=ISS;NAS] [GO:0005737 "cytoplasm" evidence=NAS] [GO:0007346
"regulation of mitotic cell cycle" evidence=IDA] [GO:0006607
"NLS-bearing substrate import into nucleus" evidence=IMP]
[GO:0000793 "condensed chromosome" evidence=IDA] [GO:0046822
"regulation of nucleocytoplasmic transport" evidence=IMP]
[GO:0050767 "regulation of neurogenesis" evidence=IMP] [GO:0022008
"neurogenesis" evidence=IMP] INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005634 GO:GO:0007346 GO:GO:0005737 EMBL:AE014296
GO:GO:0051301 GO:GO:0007067 GO:GO:0007417 GO:GO:0046822
GO:GO:0003682 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
GO:GO:0005085 PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626
PROSITE:PS50012 eggNOG:COG5184 GO:GO:0050767 PDB:3MVD PDBsum:3MVD
GeneTree:ENSGT00700000104160 EMBL:X58530 EMBL:AY070540 PIR:S15028
RefSeq:NP_523943.1 RefSeq:NP_729118.1 RefSeq:NP_729119.1
UniGene:Dm.8023 ProteinModelPortal:P25171 SMR:P25171 DIP:DIP-17766N
IntAct:P25171 MINT:MINT-781282 STRING:P25171 PaxDb:P25171
EnsemblMetazoa:FBtr0077074 EnsemblMetazoa:FBtr0077075
EnsemblMetazoa:FBtr0077076 GeneID:38669 KEGG:dme:Dmel_CG10480
CTD:38669 FlyBase:FBgn0002638 InParanoid:P25171 KO:K11493
OMA:PFEAIWA OrthoDB:EOG437PW4 PhylomeDB:P25171 ChiTaRS:Bj1
GenomeRNAi:38669 NextBio:809817 Bgee:P25171 GermOnline:CG10480
Uniprot:P25171
Length = 547
Score = 204 (76.9 bits), Expect = 2.9e-13, P = 2.9e-13
Identities = 107/421 (25%), Positives = 178/421 (42%)
Query: 31 SGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGTLFTWGANE 90
+G G+ G + K+L P + G P +DI+ G H + G ++++G N+
Sbjct: 49 NGDVGQLGLGEDILERKRLSP-VAGIPDA-----VDISAGGMHNLVLTKSGDIYSFGCND 102
Query: 91 FGQLG-DGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTSRLWVWGQ 149
G LG D +E+G + + L + + IS G +A + E DG R++ WG
Sbjct: 103 EGALGRDTSEDGSESKPDLIDLPGKAL-CISAGDSHSACLLE----DG-----RVFAWGS 152
Query: 150 NQGS--NFPRLFWG-AFTP-----NTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGR 201
+ S N G TP T+ C ++ G+ H+V L+ G + G E GQLGR
Sbjct: 153 FRDSHGNMGLTIDGNKRTPIDLMEGTVCCSIASGADHLVILTTAGKVFTVGCAEQGQLGR 212
Query: 202 ----GITCEGLQGPR-VIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGS 256
I+ EG +G R +++ + A E I + + S+ ++ GL +
Sbjct: 213 LSERSISGEGRRGKRDLLRPTQLIITRAKPFEAIWATNYCTFMRE--SQTQVIWATGLNN 270
Query: 257 VGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLG 316
QL H + + L P + D I+ +A G H+ LT+ G + G+LG
Sbjct: 271 FKQLAH-ETKGKEFALTPIKTELKD---IRHIAGGQHHTVILTTDLKCSVVGRPEYGRLG 326
Query: 317 LGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQ 376
LG ++ E T + + +V G V C ++ T+ DG+++ WG Q
Sbjct: 327 LGDVK---DVV--EKPTIVKKLTEKIVSVGCGEV-CSYAVTI----DGKLYSWGSGVNNQ 376
Query: 377 AANEKSTYAWYPSPV--DWCVGEVRKLAAGGGHSAVL---ADACSLKELCEFRLAESVTL 431
P V G+ LA+GGG A+ AD KE +++ S ++
Sbjct: 377 LGVGDGDDELEPIVVVSKNTQGKHMLLASGGGQHAIFLVKADKQDQKENVPVKVSGSSSI 436
Query: 432 S 432
S
Sbjct: 437 S 437
Score = 143 (55.4 bits), Expect = 1.6e-06, P = 1.6e-06
Identities = 52/173 (30%), Positives = 80/173 (46%)
Query: 247 GEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGI-FIKDVACGGVHSCALTSKGALY 305
G V G G VGQLG G+ L +R+ + GI D++ GG+H+ LT G +Y
Sbjct: 42 GNVLVCGNGDVGQLG-----LGEDILERKRLSPVAGIPDAVDISAGGMHNLVLTKSGDIY 96
Query: 306 AWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILV-VPNGVQLVACGHSHTLVYMRDG 364
++G + G LG R S +ES P L+ +P ++ G SH+ + DG
Sbjct: 97 SFGCNDEGALG-----RDTSEDGSESK------PDLIDLPGKALCISAGDSHSACLLEDG 145
Query: 365 RIHGWGY--NSYGQAANEKSTYAWYPSPVDWCVGEVR-KLAAGGGHSAVLADA 414
R+ WG +S+G + +P+D G V +A+G H +L A
Sbjct: 146 RVFAWGSFRDSHGNMG--LTIDGNKRTPIDLMEGTVCCSIASGADHLVILTTA 196
>UNIPROTKB|F1NDJ4 [details] [associations]
symbol:RCCD1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IEA] INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005886 GO:GO:0005737 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PROSITE:PS00626 PROSITE:PS50012
GeneTree:ENSGT00700000104312 EMBL:AADN02038799 IPI:IPI00812606
Ensembl:ENSGALT00000038135 OMA:GHKDTSS Uniprot:F1NDJ4
Length = 221
Score = 141 (54.7 bits), Expect = 3.5e-13, Sum P(2) = 3.5e-13
Identities = 41/114 (35%), Positives = 55/114 (48%)
Query: 214 IKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELL 273
I+ + LD P + VSCG H+AA++ GE+ TWG G GQLGH S D
Sbjct: 103 IQAFPALLD-LPLEPAVAAVSCGSRHTAALTRGGELNTWGWGKYGQLGHGDRASCDH--- 158
Query: 274 PRRVVAL--DGIFIKDVACG--GVHSCALTSKGALYAWGGSQAGQLGLGPQTRS 323
PRRV L +G+ ++V CG + C L A + S A L G + S
Sbjct: 159 PRRVEQLWAEGLRAQEVVCGPWNTYVCVLQQGEARDSHAPSTALALQAGTELGS 212
Score = 141 (54.7 bits), Expect = 2.1e-07, P = 2.1e-07
Identities = 31/60 (51%), Positives = 40/60 (66%)
Query: 258 GQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGL 317
GQLGH SL+S E PR V AL G+ ++ VA GG HS ++ G LY WG +++GQLGL
Sbjct: 11 GQLGHGSLES---EQQPRLVEALGGVPMRAVAAGGWHSACVSDGGDLYVWGWNESGQLGL 67
Score = 128 (50.1 bits), Expect = 2.8e-08, Sum P(2) = 2.8e-08
Identities = 24/58 (41%), Positives = 36/58 (62%)
Query: 67 IACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKS--ISCG 122
++CG HTAA+ G L TWG ++GQLG G HP +V+QL +E +++ + CG
Sbjct: 121 VSCGSRHTAALTRGGELNTWGWGKYGQLGHGDRASCDHPRRVEQLWAEGLRAQEVVCG 178
Score = 105 (42.0 bits), Expect = 1.7e-08, Sum P(2) = 1.7e-08
Identities = 32/95 (33%), Positives = 45/95 (47%)
Query: 155 FPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVI 214
FP L P + VSCGS H AL+ G L WG+ +YGQLG G RV
Sbjct: 106 FPALLDLPLEP--AVAAVSCGSRHTAALTRGGELNTWGWGKYGQLGHGDRASCDHPRRVE 163
Query: 215 KGYAKFLDEAPELEKITQVSCGEYHS-AAVSENGE 248
+ +A+ L + +V CG +++ V + GE
Sbjct: 164 QLWAEGL-------RAQEVVCGPWNTYVCVLQQGE 191
Score = 90 (36.7 bits), Expect = 3.5e-13, Sum P(2) = 3.5e-13
Identities = 27/74 (36%), Positives = 38/74 (51%)
Query: 22 AIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDG 81
+++V + H GQ G E + + P+ L L G P A +A G H+A V+ G
Sbjct: 2 SVHVSPHRH-GQLGHGSLESEQQ-PR-LVEALGGVPMRA------VAAGGWHSACVSDGG 52
Query: 82 TLFTWGANEFGQLG 95
L+ WG NE GQLG
Sbjct: 53 DLYVWGWNESGQLG 66
Score = 72 (30.4 bits), Expect = 2.5e-11, Sum P(2) = 2.5e-11
Identities = 14/29 (48%), Positives = 18/29 (62%)
Query: 172 VSCGSVHVVALSECGLLQAWGYNEYGQLG 200
V+ G H +S+ G L WG+NE GQLG
Sbjct: 38 VAAGGWHSACVSDGGDLYVWGWNESGQLG 66
Score = 64 (27.6 bits), Expect = 1.7e-10, Sum P(2) = 1.7e-10
Identities = 18/60 (30%), Positives = 31/60 (51%)
Query: 92 GQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTSRLWVWGQNQ 151
GQLG G+ E + P V+ L +++++ G +A ++ DG L+VWG N+
Sbjct: 11 GQLGHGSLESEQQPRLVEALGGVPMRAVAAGGWHSACVS-----DG----GDLYVWGWNE 61
Score = 60 (26.2 bits), Expect = 4.4e-10, Sum P(2) = 4.4e-10
Identities = 10/17 (58%), Positives = 12/17 (70%)
Query: 23 IYVWGYNHSGQTGRKGR 39
+YVWG+N SGQ G R
Sbjct: 54 LYVWGWNESGQLGLPSR 70
>ZFIN|ZDB-GENE-070402-2 [details] [associations]
symbol:als2a "amyotrophic lateral sclerosis 2a
(juvenile)" species:7955 "Danio rerio" [GO:0035023 "regulation of
Rho protein signal transduction" evidence=IEA] [GO:0005089 "Rho
guanyl-nucleotide exchange factor activity" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0043025 "neuronal
cell body" evidence=ISS] [GO:0030425 "dendrite" evidence=ISS]
[GO:0005769 "early endosome" evidence=ISS] [GO:0016197 "endosomal
transport" evidence=ISS] [GO:0035249 "synaptic transmission,
glutamatergic" evidence=ISS] [GO:0005813 "centrosome" evidence=ISS]
[GO:0014069 "postsynaptic density" evidence=ISS] [GO:0007528
"neuromuscular junction development" evidence=ISS] [GO:0030424
"axon" evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS]
[GO:0043197 "dendritic spine" evidence=ISS] [GO:0007409
"axonogenesis" evidence=ISS] [GO:0016050 "vesicle organization"
evidence=ISS] [GO:0017137 "Rab GTPase binding" evidence=ISS]
[GO:0017112 "Rab guanyl-nucleotide exchange factor activity"
evidence=ISS] InterPro:IPR000219 Pfam:PF00621 PROSITE:PS50010
INTERPRO:IPR000408 Pfam:PF00415 Pfam:PF02204 ZFIN:ZDB-GENE-070402-2
Gene3D:2.30.29.30 InterPro:IPR011993 GO:GO:0005622 GO:GO:0005089
Gene3D:1.20.900.10 SUPFAM:SSF48065 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0035023 InterPro:IPR003409
InterPro:IPR003123 Pfam:PF02493 SMART:SM00698 PROSITE:PS51205
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 EMBL:BK005193
UniGene:Dr.102729 ProteinModelPortal:I7L9G3 Uniprot:I7L9G3
Length = 1590
Score = 176 (67.0 bits), Expect = 1.8e-12, Sum P(2) = 1.8e-12
Identities = 47/132 (35%), Positives = 68/132 (51%)
Query: 169 ICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEA--PE 226
+ VS GS H A++E GL+ WG N YGQ G T + + P + DE P+
Sbjct: 82 VISVSAGSYHCSAVTEDGLVLMWGENSYGQCGVSGT-DRVPSPTPVTVVD---DETHPPQ 137
Query: 227 LEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIK 286
L ++ V+CG H+ A+S EV+ WG G QLG + + P++V L G ++
Sbjct: 138 LVRVLNVACGAQHTLALSNKHEVWAWGSGC--QLG--LVTNVFPVWKPQKVEHLVGRYVV 193
Query: 287 DVACGGVHSCAL 298
+ACG HS AL
Sbjct: 194 QIACGAFHSLAL 205
Score = 143 (55.4 bits), Expect = 1.7e-05, Sum P(2) = 1.7e-05
Identities = 46/142 (32%), Positives = 69/142 (48%)
Query: 228 EKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDG----- 282
+ + VS G YH +AV+E+G V WG S GQ C + D+ P V +D
Sbjct: 80 QHVISVSAGSYHCSAVTEDGLVLMWGENSYGQ---CGVSGTDRVPSPTPVTVVDDETHPP 136
Query: 283 --IFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPI 340
+ + +VACG H+ AL++K ++AWG QLGL T F + + +
Sbjct: 137 QLVRVLNVACGAQHTLALSNKHEVWAWGSGC--QLGL--VTNVFPVWKPQK------VEH 186
Query: 341 LVVPNGVQLVACGHSHTLVYMR 362
LV VQ +ACG H+L ++
Sbjct: 187 LVGRYVVQ-IACGAFHSLALVQ 207
Score = 140 (54.3 bits), Expect = 4.2e-13, Sum P(2) = 4.2e-13
Identities = 45/140 (32%), Positives = 69/140 (49%)
Query: 229 KITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGD--KELLPRRVVALDGIFIK 286
+ + S E + S EV++WG G GQLGH GD L P + +L +
Sbjct: 502 RAVRASTSESRNLLPSLFTEVWSWGKGHEGQLGH-----GDYLPRLQPLCIKSLSKKEVV 556
Query: 287 DVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNG 346
+ G HS ALT++ +Y+WG + GQLG + S S +PN + V +G
Sbjct: 557 KITAGANHSLALTAQCQVYSWGSEKFGQLG---RMNSPSTVPN----------LTTVSDG 603
Query: 347 VQL--VACGHSHTLVYMRDG 364
+++ VA G +HTL+ + DG
Sbjct: 604 IRVWDVAAGQTHTLL-LADG 622
Score = 134 (52.2 bits), Expect = 1.9e-12, Sum P(2) = 1.9e-12
Identities = 41/128 (32%), Positives = 58/128 (45%)
Query: 190 AWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEV 249
+WG GQLG G LQ P IK +K +++ +++ G HS A++ +V
Sbjct: 524 SWGKGHEGQLGHGDYLPRLQ-PLCIKSLSK--------KEVVKITAGANHSLALTAQCQV 574
Query: 250 YTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYA--- 306
Y+WG GQLG + S +P DGI + DVA G H+ L G Y
Sbjct: 575 YSWGSEKFGQLGRMNSPS----TVPNLTTVSDGIRVWDVAAGQTHTLLLAD-GDCYQPIL 629
Query: 307 -WGGSQAG 313
+ G Q G
Sbjct: 630 YYSGEQIG 637
Score = 133 (51.9 bits), Expect = 0.00020, Sum P(2) = 0.00020
Identities = 57/203 (28%), Positives = 79/203 (38%)
Query: 215 KGYAKFLDEAPE---LEK-ITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDK 270
+GY F +PE L + + + G H + E G+VY S G+ ++
Sbjct: 17 QGY--FCSVSPEKLLLSRPVLHAALGSLHGLLLIEGGQVY-----SFGEQPWKPVEPPPA 69
Query: 271 ELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNE 330
L+ L G + V+ G H A+T G + WG + GQ G+ R S P
Sbjct: 70 SLVLEST--LSGQHVISVSAGSYHCSAVTEDGLVLMWGENSYGQCGVSGTDRVPSPTPVT 127
Query: 331 SDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYN-SYGQAANEKSTYAWYPS 389
+ P LV V VACG HTL + WG G N W P
Sbjct: 128 VVDDETHPPQLV---RVLNVACGAQHTLALSNKHEVWAWGSGCQLGLVTNVFPV--WKPQ 182
Query: 390 PVDWCVGE-VRKLAAGGGHSAVL 411
V+ VG V ++A G HS L
Sbjct: 183 KVEHLVGRYVVQIACGAFHSLAL 205
Score = 122 (48.0 bits), Expect = 4.2e-13, Sum P(2) = 4.2e-13
Identities = 34/112 (30%), Positives = 55/112 (49%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANS--RWLDIACGHEHTAAVASD 80
+ +WG N GQ G G +R +P P + R L++ACG +HT A+++
Sbjct: 101 VLMWGENSYGQCGVSGTDR---VPSPTPVTVVDDETHPPQLVRVLNVACGAQHTLALSNK 157
Query: 81 GTLFTWGANEFGQLGDGTEEGRK-HPEKVKQLQSEFVKSISCGAHCTAAIAE 131
++ WG+ QLG T P+KV+ L +V I+CGA + A+ +
Sbjct: 158 HEVWAWGSG--CQLGLVTNVFPVWKPQKVEHLVGRYVVQIACGAFHSLALVQ 207
Score = 112 (44.5 bits), Expect = 4.6e-12, Sum P(2) = 4.6e-12
Identities = 34/133 (25%), Positives = 56/133 (42%)
Query: 65 LDIACGHEHTAAVASDGTLFTWGANEFGQLG-DGTEEGRKHPEKVKQLQSEF-------V 116
+ ++ G H +AV DG + WG N +GQ G GT+ P V + E V
Sbjct: 83 ISVSAGSYHCSAVTEDGLVLMWGENSYGQCGVSGTDRVPS-PTPVTVVDDETHPPQLVRV 141
Query: 117 KSISCGAHCTAAIAEPRENDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTI-------I 169
+++CGA T A++ E +W WG + + P + +
Sbjct: 142 LNVACGAQHTLALSNKHE---------VWAWGSGCQLGLVTNVFPVWKPQKVEHLVGRYV 192
Query: 170 CQVSCGSVHVVAL 182
Q++CG+ H +AL
Sbjct: 193 VQIACGAFHSLAL 205
Score = 78 (32.5 bits), Expect = 1.8e-12, Sum P(2) = 1.8e-12
Identities = 29/111 (26%), Positives = 49/111 (44%)
Query: 304 LYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRD 363
+++WG GQLG G +P +++ V V++ A G +H+L
Sbjct: 522 VWSWGKGHEGQLGHG------DYLPRLQPLCIKSLSKKEV---VKITA-GANHSLALTAQ 571
Query: 364 GRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLAD 413
+++ WG +GQ S + P+ G V +AAG H+ +LAD
Sbjct: 572 CQVYSWGSEKFGQLGRMNSP-STVPNLTTVSDGIRVWDVAAGQTHTLLLAD 621
Score = 74 (31.1 bits), Expect = 7.2e-06, Sum P(3) = 7.2e-06
Identities = 29/133 (21%), Positives = 60/133 (45%)
Query: 127 AAIAEPRENDGTISTSRLWVWGQNQ------GSNFPRL---FWGAFTPNTIICQVSCGSV 177
A+ +E R ++ T +W WG+ G PRL + + ++ +++ G+
Sbjct: 506 ASTSESRNLLPSLFTE-VWSWGKGHEGQLGHGDYLPRLQPLCIKSLSKKEVV-KITAGAN 563
Query: 178 HVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGE 237
H +AL+ + +WG ++GQLGR + P + D ++ V+ G+
Sbjct: 564 HSLALTAQCQVYSWGSEKFGQLGR------MNSPSTVPNLTTVSDGI----RVWDVAAGQ 613
Query: 238 YHSAAVSENGEVY 250
H+ +++ G+ Y
Sbjct: 614 THTLLLAD-GDCY 625
Score = 65 (27.9 bits), Expect = 3.2e-07, Sum P(2) = 3.2e-07
Identities = 36/139 (25%), Positives = 59/139 (42%)
Query: 111 LQSEFVKSISCGA-HCTAAIAEPREND-GTISTSRLWVWGQNQ-GSNFPRLFWGAFT--P 165
L + V S+S G+ HC+A + G S + V G ++ S P T P
Sbjct: 77 LSGQHVISVSAGSYHCSAVTEDGLVLMWGENSYGQCGVSGTDRVPSPTPVTVVDDETHPP 136
Query: 166 NTI-ICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEA 224
+ + V+CG+ H +ALS + AWG QLG + P+ ++
Sbjct: 137 QLVRVLNVACGAQHTLALSNKHEVWAWGSG--CQLGLVTNVFPVWKPQKVEHLVG----- 189
Query: 225 PELEKITQVSCGEYHSAAV 243
+ Q++CG +HS A+
Sbjct: 190 ---RYVVQIACGAFHSLAL 205
Score = 45 (20.9 bits), Expect = 4.7e-09, Sum P(2) = 4.7e-09
Identities = 9/21 (42%), Positives = 11/21 (52%)
Query: 397 EVRKLAAGGGHSAVLADACSL 417
EV K+ AG HS L C +
Sbjct: 554 EVVKITAGANHSLALTAQCQV 574
Score = 41 (19.5 bits), Expect = 7.2e-06, Sum P(3) = 7.2e-06
Identities = 21/69 (30%), Positives = 28/69 (40%)
Query: 246 NGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACG-GVHSCALTSKGAL 304
+GEVY + GH L+SG K P G +++ G GV C S+G
Sbjct: 1090 SGEVYEGSFRENMRHGHGMLRSG-KVASPSSSSVFVGQWVQGKRTGYGV--CDDFSRGEK 1146
Query: 305 YA--WGGSQ 311
Y W Q
Sbjct: 1147 YMGIWHDDQ 1155
>UNIPROTKB|I3L8I2 [details] [associations]
symbol:LOC100737658 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0004674
"protein serine/threonine kinase activity" evidence=IEA]
InterPro:IPR000719 InterPro:IPR008271 InterPro:IPR011009
InterPro:IPR017441 Pfam:PF00069 PROSITE:PS00107 PROSITE:PS00108
PROSITE:PS50011 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005524
SUPFAM:SSF56112 GO:GO:0004674 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS50012
GeneTree:ENSGT00700000104137 Ensembl:ENSSSCT00000025619
Uniprot:I3L8I2
Length = 676
Score = 203 (76.5 bits), Expect = 5.5e-13, P = 5.5e-13
Identities = 83/304 (27%), Positives = 131/304 (43%)
Query: 67 IACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCT 126
+ACG TA + G + T+G+ G LG G+ P V+ L + ++CGA
Sbjct: 387 VACGDLFTACLTDRGIIMTFGSGSNGCLGHGSLNDISQPTIVEALLGYEMVQVACGASHV 446
Query: 127 AAIAEPREND--GTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSE 184
A++ RE G RL + G + P+L P +V CG + L+
Sbjct: 447 LALSTERELFAWGRGDGGRLGL-GTRESHCCPQLV--PMPPGQEAQRVVCGIDSSMILTV 503
Query: 185 CGLLQAWGYNEYGQLGRGITCEGLQ-GP-RVIKGYAKF--LDEAP-ELEKITQVSCGEYH 239
G A G N + +LG G + P + ++ F L AP + E + V G H
Sbjct: 504 PGQALACGSNRFNKLGLDPLSLGEEPAPHQQVEEAVTFTPLGSAPLDQEPLLSVDLGTAH 563
Query: 240 SAAVSE-NGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCAL 298
SAAV+ +G+ YT+G + ++ P RV L GI I VACG + A+
Sbjct: 564 SAAVTXASGDCYTFG-SNARRVSRA----------PCRVQGLQGIKISTVACGDAFTVAI 612
Query: 299 TSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTL 358
++G +++WG G+LG + +T+ P V V+C H +TL
Sbjct: 613 GAEGEVFSWGKGARGRLGRKDEDAGLPRPVQLDETH---------PYTVTSVSCCHGNTL 663
Query: 359 VYMR 362
+ +R
Sbjct: 664 LAVR 667
Score = 183 (69.5 bits), Expect = 8.7e-11, P = 8.7e-11
Identities = 66/232 (28%), Positives = 106/232 (45%)
Query: 166 NTIICQVSCGSVHVVALSECGLLQAWGY--NEYGQLGRG---ITCEGLQGPRVIKGYAKF 220
NT + QV+ G ++ C L A ++ LG G + ++ P+ + ++F
Sbjct: 317 NTEVVQVAAGRTQKAGVTRCLPLPAPSPVPSQAPPLGAGGGALLPGAIEQPQP-QFVSRF 375
Query: 221 LDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVAL 280
L E I V+CG+ +A +++ G + T+G GS G LGH SL + P V AL
Sbjct: 376 L-EGQSGVTIKHVACGDLFTACLTDRGIIMTFGSGSNGCLGHGSLNDISQ---PTIVEAL 431
Query: 281 DGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPI 340
G + VACG H AL+++ L+AWG G+LGLG TR P +
Sbjct: 432 LGYEMVQVACGASHVLALSTERELFAWGRGDGGRLGLG--TRESHCCPQ----------L 479
Query: 341 LVVPNG--VQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSP 390
+ +P G Q V CG +++ G+ G N + + + + P+P
Sbjct: 480 VPMPPGQEAQRVVCGIDSSMILTVPGQALACGSNRFNKLGLDPLSLGEEPAP 531
Score = 106 (42.4 bits), Expect = 0.00020, Sum P(2) = 0.00020
Identities = 20/68 (29%), Positives = 34/68 (50%)
Query: 65 LDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAH 124
+ +ACG H A++++ LF WG + G+LG GT E P+ V + + + CG
Sbjct: 437 VQVACGASHVLALSTERELFAWGRGDGGRLGLGTRESHCCPQLVPMPPGQEAQRVVCGID 496
Query: 125 CTAAIAEP 132
+ + P
Sbjct: 497 SSMILTVP 504
Score = 65 (27.9 bits), Expect = 0.00020, Sum P(2) = 0.00020
Identities = 14/45 (31%), Positives = 21/45 (46%)
Query: 347 VQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPV 391
+ VACG + T+ +G + WG + G+ K A P PV
Sbjct: 599 ISTVACGDAFTVAIGAEGEVFSWGKGARGRLGR-KDEDAGLPRPV 642
>UNIPROTKB|I3L5B6 [details] [associations]
symbol:LOC100737658 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0004674
"protein serine/threonine kinase activity" evidence=IEA]
InterPro:IPR000719 InterPro:IPR008271 InterPro:IPR011009
InterPro:IPR017441 Pfam:PF00069 PROSITE:PS00107 PROSITE:PS00108
PROSITE:PS50011 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005524
SUPFAM:SSF56112 GO:GO:0004674 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS50012
GeneTree:ENSGT00700000104137 Ensembl:ENSSSCT00000029356 OMA:PEREMAM
Uniprot:I3L5B6
Length = 680
Score = 203 (76.5 bits), Expect = 5.5e-13, P = 5.5e-13
Identities = 83/304 (27%), Positives = 131/304 (43%)
Query: 67 IACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCT 126
+ACG TA + G + T+G+ G LG G+ P V+ L + ++CGA
Sbjct: 391 VACGDLFTACLTDRGIIMTFGSGSNGCLGHGSLNDISQPTIVEALLGYEMVQVACGASHV 450
Query: 127 AAIAEPREND--GTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSE 184
A++ RE G RL + G + P+L P +V CG + L+
Sbjct: 451 LALSTERELFAWGRGDGGRLGL-GTRESHCCPQLV--PMPPGQEAQRVVCGIDSSMILTV 507
Query: 185 CGLLQAWGYNEYGQLGRGITCEGLQ-GP-RVIKGYAKF--LDEAP-ELEKITQVSCGEYH 239
G A G N + +LG G + P + ++ F L AP + E + V G H
Sbjct: 508 PGQALACGSNRFNKLGLDPLSLGEEPAPHQQVEEAVTFTPLGSAPLDQEPLLSVDLGTAH 567
Query: 240 SAAVSE-NGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCAL 298
SAAV+ +G+ YT+G + ++ P RV L GI I VACG + A+
Sbjct: 568 SAAVTXASGDCYTFG-SNARRVSRA----------PCRVQGLQGIKISTVACGDAFTVAI 616
Query: 299 TSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTL 358
++G +++WG G+LG + +T+ P V V+C H +TL
Sbjct: 617 GAEGEVFSWGKGARGRLGRKDEDAGLPRPVQLDETH---------PYTVTSVSCCHGNTL 667
Query: 359 VYMR 362
+ +R
Sbjct: 668 LAVR 671
Score = 183 (69.5 bits), Expect = 8.8e-11, P = 8.8e-11
Identities = 66/232 (28%), Positives = 106/232 (45%)
Query: 166 NTIICQVSCGSVHVVALSECGLLQAWGY--NEYGQLGRG---ITCEGLQGPRVIKGYAKF 220
NT + QV+ G ++ C L A ++ LG G + ++ P+ + ++F
Sbjct: 321 NTEVVQVAAGRTQKAGVTRCLPLPAPSPVPSQAPPLGAGGGALLPGAIEQPQP-QFVSRF 379
Query: 221 LDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVAL 280
L E I V+CG+ +A +++ G + T+G GS G LGH SL + P V AL
Sbjct: 380 L-EGQSGVTIKHVACGDLFTACLTDRGIIMTFGSGSNGCLGHGSLNDISQ---PTIVEAL 435
Query: 281 DGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPI 340
G + VACG H AL+++ L+AWG G+LGLG TR P +
Sbjct: 436 LGYEMVQVACGASHVLALSTERELFAWGRGDGGRLGLG--TRESHCCPQ----------L 483
Query: 341 LVVPNG--VQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSP 390
+ +P G Q V CG +++ G+ G N + + + + P+P
Sbjct: 484 VPMPPGQEAQRVVCGIDSSMILTVPGQALACGSNRFNKLGLDPLSLGEEPAP 535
Score = 106 (42.4 bits), Expect = 0.00020, Sum P(2) = 0.00020
Identities = 20/68 (29%), Positives = 34/68 (50%)
Query: 65 LDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAH 124
+ +ACG H A++++ LF WG + G+LG GT E P+ V + + + CG
Sbjct: 441 VQVACGASHVLALSTERELFAWGRGDGGRLGLGTRESHCCPQLVPMPPGQEAQRVVCGID 500
Query: 125 CTAAIAEP 132
+ + P
Sbjct: 501 SSMILTVP 508
Score = 65 (27.9 bits), Expect = 0.00020, Sum P(2) = 0.00020
Identities = 14/45 (31%), Positives = 21/45 (46%)
Query: 347 VQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPV 391
+ VACG + T+ +G + WG + G+ K A P PV
Sbjct: 603 ISTVACGDAFTVAIGAEGEVFSWGKGARGRLGR-KDEDAGLPRPV 646
>FB|FBgn0000247 [details] [associations]
symbol:ca "claret" species:7227 "Drosophila melanogaster"
[GO:0006727 "ommochrome biosynthetic process" evidence=IMP]
[GO:0006856 "eye pigment precursor transport" evidence=TAS]
[GO:0017137 "Rab GTPase binding" evidence=IPI] [GO:0005622
"intracellular" evidence=IDA] [GO:0008057 "eye pigment granule
organization" evidence=IMP] [GO:0005085 "guanyl-nucleotide exchange
factor activity" evidence=IPI] [GO:0017112 "Rab guanyl-nucleotide
exchange factor activity" evidence=IPI] [GO:0060967 "negative
regulation of gene silencing by RNA" evidence=IMP]
INTERPRO:IPR000408 Pfam:PF00415 EMBL:AE014297 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PROSITE:PS50012 GO:GO:0008057
GO:GO:0060967 GO:GO:0006727 GO:GO:0006856
GeneTree:ENSGT00700000104208 FlyBase:FBgn0000247 EMBL:BT057978
RefSeq:NP_733309.3 UniGene:Dm.6851 SMR:Q9VAG5 MINT:MINT-1644098
STRING:Q9VAG5 EnsemblMetazoa:FBtr0085484 GeneID:43518
KEGG:dme:Dmel_CG31037 UCSC:CG31037-RA CTD:43518 InParanoid:Q9VAG5
OMA:DNTLHIV GenomeRNAi:43518 NextBio:834351 Uniprot:Q9VAG5
Length = 1961
Score = 162 (62.1 bits), Expect = 8.4e-13, Sum P(2) = 8.4e-13
Identities = 73/268 (27%), Positives = 115/268 (42%)
Query: 61 NSRWLDIACGHEHTAAVASDGTLFTWGAN---EFGQLGDGTEEGRK-HPEKVKQLQSEF- 115
+SR+ I+ G + A V DGT + WG++ + TE H K L S+
Sbjct: 1114 SSRFKPISAGCAYCACVV-DGTAYFWGSSGIPSYYSAQKSTEPPEPAHAVKSLDLLSQLN 1172
Query: 116 --VKSISCGAHCTAAIAEPREND-GTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQV 172
V +I CG T + G + +L + Q + P L N I +
Sbjct: 1173 LQVHAIKCGRQHTLILTNNGLYSLGNNNLCQLGIGRHMQMALQPMLVTALDGMN--ITML 1230
Query: 173 SCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYA-KFLDEAPELEKIT 231
G H A+++ G L WG+ YGQLG+G +CE + P+++ + K + + T
Sbjct: 1231 EAGQYHNAAVAD-GKLYMWGWGIYGQLGQG-SCENIATPQLVSFFKFKKILQISLGHAHT 1288
Query: 232 QVSCG--EYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGD-KELLPRRVVALDGIFIKDV 288
V CG H A E++ +G GQLG + GD K LP R+ D ++ +
Sbjct: 1289 LVLCGAPNSHMEANHCGNELFVFGSNHFGQLGTGNSDHGDTKTNLPVRLEVGD-CSLRLI 1347
Query: 289 ACGGVHSCALTSKGALYAWGGS-QAGQL 315
+ A+ + L+ WG S QA +L
Sbjct: 1348 HTKFFTNLAVDEQDRLFTWGSSPQALRL 1375
Score = 134 (52.2 bits), Expect = 7.3e-05, P = 7.3e-05
Identities = 48/161 (29%), Positives = 74/161 (45%)
Query: 166 NTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAP 225
N + + CG H + L+ GL G N QLG G + P ++ LD
Sbjct: 1172 NLQVHAIKCGRQHTLILTNNGLYSL-GNNNLCQLGIGRHMQMALQPMLVTA----LDGM- 1225
Query: 226 ELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQS-GDKELLP----RRVVAL 280
IT + G+YH+AAV++ G++Y WG G GQLG S ++ +L+ ++++ +
Sbjct: 1226 ---NITMLEAGQYHNAAVAD-GKLYMWGWGIYGQLGQGSCENIATPQLVSFFKFKKILQI 1281
Query: 281 D-GIFIKDVACGGV--HSCALTSKGALYAWGGSQAGQLGLG 318
G V CG H A L+ +G + GQLG G
Sbjct: 1282 SLGHAHTLVLCGAPNSHMEANHCGNELFVFGSNHFGQLGTG 1322
Score = 126 (49.4 bits), Expect = 2.0e-09, Sum P(2) = 2.0e-09
Identities = 44/136 (32%), Positives = 61/136 (44%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
I + +Y G N+ Q G GR Q+ L P L G N L+ G H AA
Sbjct: 1187 ILTNNGLYSLGNNNLCQLGI-GRHMQMA----LQPMLVTALDGMNITMLE--AGQYHNAA 1239
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCG-AHCTAAIAEPREN 135
VA DG L+ WG +GQLG G+ E P+ V + + + IS G AH P +
Sbjct: 1240 VA-DGKLYMWGWGIYGQLGQGSCENIATPQLVSFFKFKKILQISLGHAHTLVLCGAPNSH 1298
Query: 136 -DGTISTSRLWVWGQN 150
+ + L+V+G N
Sbjct: 1299 MEANHCGNELFVFGSN 1314
Score = 103 (41.3 bits), Expect = 2.0e-09, Sum P(2) = 2.0e-09
Identities = 30/103 (29%), Positives = 50/103 (48%)
Query: 221 LDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKE--LLPRRVV 278
+D + +I Q+S G +H +S + +YTWG QLG + D+ L P +
Sbjct: 1494 VDTSEVAGRILQISSGLFHFCLISSSCTLYTWGKNLEHQLG---TEDKDRRAVLKPSPID 1550
Query: 279 ALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLG--LGP 319
+++ D CG + +T+ + A+GG+ GQ G LGP
Sbjct: 1551 SIERPMYVD--CGSDFTLVMTTDHVVRAFGGNSNGQCGRDLGP 1591
Score = 98 (39.6 bits), Expect = 8.4e-13, Sum P(2) = 8.4e-13
Identities = 30/96 (31%), Positives = 42/96 (43%)
Query: 285 IKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVP 344
I ++ G H C ++S LY WG + QLG + R L P+ D+ R P+ V
Sbjct: 1503 ILQISSGLFHFCLISSSCTLYTWGKNLEHQLGTEDKDRRAVLKPSPIDSIER--PMYV-- 1558
Query: 345 NGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANE 380
CG TLV D + +G NS GQ +
Sbjct: 1559 ------DCGSDFTLVMTTDHVVRAFGGNSNGQCGRD 1588
Score = 82 (33.9 bits), Expect = 0.00028, Sum P(2) = 0.00028
Identities = 25/88 (28%), Positives = 41/88 (46%)
Query: 19 AKSAIYVWGYNHSGQTGRKGRERQLRIPKQLP----PELFGCPAGANSRWLDIACG--HE 72
A +Y+WG+ GQ G+ G + P+ + ++ G ++ L + CG +
Sbjct: 1241 ADGKLYMWGWGIYGQLGQ-GSCENIATPQLVSFFKFKKILQISLG-HAHTL-VLCGAPNS 1297
Query: 73 HTAAVASDGTLFTWGANEFGQLGDGTEE 100
H A LF +G+N FGQLG G +
Sbjct: 1298 HMEANHCGNELFVFGSNHFGQLGTGNSD 1325
Score = 69 (29.3 bits), Expect = 6.2e-06, Sum P(2) = 6.2e-06
Identities = 33/113 (29%), Positives = 46/113 (40%)
Query: 169 ICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELE 228
I Q+S G H +S L WG N QLG E V+K +D +E
Sbjct: 1503 ILQISSGLFHFCLISSSCTLYTWGKNLEHQLGT----EDKDRRAVLKPSP--IDS---IE 1553
Query: 229 KITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDK-ELLPRRVVAL 280
+ V CG + ++ + V +G S GQ C G E + +RVV L
Sbjct: 1554 RPMYVDCGSDFTLVMTTDHVVRAFGGNSNGQ---CGRDLGPSVERMRQRVVCL 1603
>RGD|1312048 [details] [associations]
symbol:Mycbp2 "MYC binding protein 2, E3 ubiquitin protein
ligase" species:10116 "Rattus norvegicus" [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0008045
"motor neuron axon guidance" evidence=ISO] [GO:0015630 "microtubule
cytoskeleton" evidence=ISO] [GO:0021785 "branchiomotor neuron axon
guidance" evidence=ISO] [GO:0021952 "central nervous system
projection neuron axonogenesis" evidence=ISO] [GO:0030424 "axon"
evidence=ISO] [GO:0032880 "regulation of protein localization"
evidence=ISO] [GO:0042803 "protein homodimerization activity"
evidence=ISO] [GO:0048667 "cell morphogenesis involved in neuron
differentiation" evidence=ISO] [GO:0051493 "regulation of
cytoskeleton organization" evidence=ISO] InterPro:IPR027047
RGD:1312048 INTERPRO:IPR000408 Pfam:PF00415 Gene3D:2.60.40.10
InterPro:IPR013783 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 InterPro:IPR014756 SUPFAM:SSF81296 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 InterPro:IPR012983 Pfam:PF08005
InterPro:IPR017868 Pfam:PF00630 PROSITE:PS50194 EMBL:CH473951
PANTHER:PTHR12846 IPI:IPI00950595 UniGene:Rn.13538
Ensembl:ENSRNOT00000064927 UCSC:RGD:1312048 Uniprot:D4A722
Length = 2667
Score = 155 (59.6 bits), Expect = 1.1e-12, Sum P(2) = 1.1e-12
Identities = 36/88 (40%), Positives = 47/88 (53%)
Query: 229 KITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDV 288
+ QVSCG +HS + ENG+VYT+G G GQLGH + S P V AL G + V
Sbjct: 917 RAVQVSCGFHHSVVLMENGDVYTFGYGQHGQLGHGDVNSRG---CPTLVQALPGPSTQ-V 972
Query: 289 ACGGVHSCALTSKGALYAWGGSQAGQLG 316
G H+ L G ++ +G GQLG
Sbjct: 973 TAGSNHTAVLVMDGQVFTFGSFSKGQLG 1000
Score = 107 (42.7 bits), Expect = 1.1e-12, Sum P(2) = 1.1e-12
Identities = 47/178 (26%), Positives = 79/178 (44%)
Query: 57 PAGANSRWLDIACGHE--HTAAVASDGTLFTWGANEFGQLGDGTEEGRKH-PEKVKQLQS 113
P + + + + GH+ H VA DG++F G+ G+ G+ + R+ P K K++
Sbjct: 551 PITKSPKIVHFSVGHDGSHALLVAEDGSVFFTGSASKGEDGESAKSRRQSKPYKPKKIIK 610
Query: 114 EFVKSISCGAHCTAAIAEPRENDGTISTSRLWVWGQNQ-GSNFPRLFWGAFTPNTIICQV 172
K + C A C + DG L+++G++ S+ L + + QV
Sbjct: 611 MEGKIVVCTA-CNNGSSSVISKDG-----ELYMFGKDAIYSDSSSLV--SDLKGHFVTQV 662
Query: 173 SCGSVHVVALSECGLLQAWGYNEYGQLGR--GITCEGLQGPRVIKGYAKFLDEAPELE 228
+ G H L + G + +G N GQ GR G +G +G V + A +DE E E
Sbjct: 663 AMGKAHTCVLMKNGEVWTFGVNNKGQCGRDTGAMNQGGKGFGV-ENMATAMDEDLEEE 719
Score = 101 (40.6 bits), Expect = 6.6e-07, Sum P(2) = 6.6e-07
Identities = 32/91 (35%), Positives = 41/91 (45%)
Query: 288 VACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILV--VPN 345
V+CG HS L G +Y +G Q GQLG G D R P LV +P
Sbjct: 921 VSCGFHHSVVLMENGDVYTFGYGQHGQLGHG-------------DVNSRGCPTLVQALPG 967
Query: 346 GVQLVACGHSHTLVYMRDGRIHGWGYNSYGQ 376
V G +HT V + DG++ +G S GQ
Sbjct: 968 PSTQVTAGSNHTAVLVMDGQVFTFGSFSKGQ 998
Score = 97 (39.2 bits), Expect = 1.7e-06, Sum P(2) = 1.7e-06
Identities = 20/62 (32%), Positives = 33/62 (53%)
Query: 350 VACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSA 409
V+CG H++V M +G ++ +GY +GQ + P+ V G ++ AG H+A
Sbjct: 921 VSCGFHHSVVLMENGDVYTFGYGQHGQLGHGDVNSRGCPTLVQALPGPSTQVTAGSNHTA 980
Query: 410 VL 411
VL
Sbjct: 981 VL 982
Score = 92 (37.4 bits), Expect = 6.3e-05, Sum P(2) = 6.3e-05
Identities = 23/83 (27%), Positives = 40/83 (48%)
Query: 229 KITQVSCGE--YHSAAVSENGEVYTWGLGSVGQLGHCSL-QSGDKELLPRRVVALDGIFI 285
KI S G H+ V+E+G V+ G S G+ G + + K P++++ ++G +
Sbjct: 557 KIVHFSVGHDGSHALLVAEDGSVFFTGSASKGEDGESAKSRRQSKPYKPKKIIKMEGKIV 616
Query: 286 KDVACGGVHSCALTSKGALYAWG 308
AC S ++ G LY +G
Sbjct: 617 VCTACNNGSSSVISKDGELYMFG 639
Score = 91 (37.1 bits), Expect = 8.0e-05, Sum P(2) = 8.0e-05
Identities = 31/120 (25%), Positives = 50/120 (41%)
Query: 197 GQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGS 256
G +G E + R K Y E + + +C S+ +S++GE+Y +G +
Sbjct: 583 GSASKGEDGESAKSRRQSKPYKPKKIIKMEGKIVVCTACNNGSSSVISKDGELYMFGKDA 642
Query: 257 VGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLG 316
+ D L V L G F+ VA G H+C L G ++ +G + GQ G
Sbjct: 643 I---------YSDSSSL---VSDLKGHFVTQVAMGKAHTCVLMKNGEVWTFGVNNKGQCG 690
Score = 39 (18.8 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 6/14 (42%), Positives = 10/14 (71%)
Query: 23 IYVWGYNHSGQTGR 36
++ +G N+ GQ GR
Sbjct: 678 VWTFGVNNKGQCGR 691
>UNIPROTKB|E9PMV6 [details] [associations]
symbol:SERGEF "Secretion-regulating guanine nucleotide
exchange factor" species:9606 "Homo sapiens" [GO:0050709 "negative
regulation of protein secretion" evidence=IEA] InterPro:IPR027048
INTERPRO:IPR000408 Pfam:PF00415 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS50012
PANTHER:PTHR22870:SF7 HGNC:HGNC:17499 EMBL:AC055860 EMBL:AC124058
EMBL:AC124078 IPI:IPI00976302 ProteinModelPortal:E9PMV6 SMR:E9PMV6
Ensembl:ENST00000529728 ArrayExpress:E9PMV6 Bgee:E9PMV6
Uniprot:E9PMV6
Length = 229
Score = 174 (66.3 bits), Expect = 1.9e-12, P = 1.9e-12
Identities = 63/216 (29%), Positives = 95/216 (43%)
Query: 182 LSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPEL--EKITQVSCGEYH 239
L+E G + + G N +GQLG GPR + +A EL EK+ ++ G H
Sbjct: 2 LTENGQVLSCGSNSFGQLGVP------HGPRRC-----VVPQAIELHKEKVVCIAAGLRH 50
Query: 240 SAAVSENGEVYTWGLGSVGQLGH--CSLQS-----GDKELLPRRVVALDGIFIKDVACGG 292
+ A + +G V+ WG G + G C Q+ KE P RV L+ V G
Sbjct: 51 AVAATASGIVFQWGTG-LASCGRRLCPGQTLPLFFTAKE--PSRVTGLENSKAMCVLAGS 107
Query: 293 VHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTY-FRNIPILVVPNGVQLVA 351
HS +LT G +Y WG ++ GQL +F +P + + + F+N V +
Sbjct: 108 DHSASLTDAGEVYVWGSNKHGQLA---NEAAFLPVPQKIEAHCFQN-------EKVTAIW 157
Query: 352 CGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTY-AW 386
G +H + G++ WG YGQ + TY W
Sbjct: 158 SGWTHLVAQTETGKMFTWGRADYGQLGRKLETYEGW 193
Score = 158 (60.7 bits), Expect = 1.5e-09, P = 1.5e-09
Identities = 61/200 (30%), Positives = 92/200 (46%)
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKH---PEKVKQLQSEFVKSISCGA-HCTAAIAEP 132
+ +G + + G+N FGQLG G + P+ + +L E V I+ G H AA A
Sbjct: 2 LTENGQVLSCGSNSFGQLG--VPHGPRRCVVPQAI-ELHKEKVVCIAAGLRHAVAATASG 58
Query: 133 ---RENDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTI--------ICQVSCGSVHVVA 181
+ G S R GQ P LF+ A P+ + +C V GS H +
Sbjct: 59 IVFQWGTGLASCGRRLCPGQT----LP-LFFTAKEPSRVTGLENSKAMC-VLAGSDHSAS 112
Query: 182 LSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSA 241
L++ G + WG N++GQL L P+ I+ + F +E K+T + G H
Sbjct: 113 LTDAGEVYVWGSNKHGQLANEAAF--LPVPQKIEAHC-FQNE-----KVTAIWSGWTHLV 164
Query: 242 AVSENGEVYTWGLGSVGQLG 261
A +E G+++TWG GQLG
Sbjct: 165 AQTETGKMFTWGRADYGQLG 184
Score = 115 (45.5 bits), Expect = 0.00034, P = 0.00034
Identities = 52/201 (25%), Positives = 80/201 (39%)
Query: 27 GYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGTLFTW 86
G N GQ G R+ +P+ + EL + + IA G H A + G +F W
Sbjct: 12 GSNSFGQLGVPHGPRRCVVPQAI--ELH------KEKVVCIAAGLRHAVAATASGIVFQW 63
Query: 87 GANEFGQLGDGTEEGR--------KHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGT 138
G G G+ K P +V L++ + G+ +A++ + E
Sbjct: 64 GTG-LASCGRRLCPGQTLPLFFTAKEPSRVTGLENSKAMCVLAGSDHSASLTDAGE---- 118
Query: 139 ISTSRLWVWGQNQGSNFPRLFWGAFTP-----------NTIICQVSCGSVHVVALSECGL 187
++VWG N+ AF P N + + G H+VA +E G
Sbjct: 119 -----VYVWGSNKHGQLANE--AAFLPVPQKIEAHCFQNEKVTAIWSGWTHLVAQTETGK 171
Query: 188 LQAWGYNEYGQLGRGI-TCEG 207
+ WG +YGQLGR + T EG
Sbjct: 172 MFTWGRADYGQLGRKLETYEG 192
>FB|FBgn0030600 [details] [associations]
symbol:hiw "highwire" species:7227 "Drosophila melanogaster"
[GO:0008582 "regulation of synaptic growth at neuromuscular
junction" evidence=IMP;TAS] [GO:0016023 "cytoplasmic
membrane-bounded vesicle" evidence=IDA] [GO:0005886 "plasma
membrane" evidence=IDA] [GO:0007628 "adult walking behavior"
evidence=NAS] [GO:0040011 "locomotion" evidence=NAS] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0030514 "negative regulation
of BMP signaling pathway" evidence=IGI] [GO:0005515 "protein
binding" evidence=IPI] [GO:0045886 "negative regulation of synaptic
growth at neuromuscular junction" evidence=IMP] [GO:0030509 "BMP
signaling pathway" evidence=IPI] [GO:0016567 "protein
ubiquitination" evidence=ISS] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=ISS] [GO:0006914 "autophagy" evidence=IDA]
[GO:0050808 "synapse organization" evidence=IDA] InterPro:IPR001841
InterPro:IPR027047 PROSITE:PS50089 SMART:SM00184
UniPathway:UPA00143 INTERPRO:IPR000408 Pfam:PF00415 Prosite:PS00518
GO:GO:0005886 GO:GO:0005634 Gene3D:2.60.40.10 InterPro:IPR013783
GO:GO:0046872 EMBL:AE014298 GO:GO:0008270 GO:GO:0006914
GO:GO:0040011 GO:GO:0050808 GO:GO:0006351 GO:GO:0016023
GO:GO:0045886 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
GO:GO:0030509 Gene3D:3.30.40.10 InterPro:IPR014756
InterPro:IPR013083 SUPFAM:SSF81296 InterPro:IPR008979
SUPFAM:SSF49785 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00625
PROSITE:PS00626 PROSITE:PS50012 InterPro:IPR004939 PROSITE:PS51284
GO:GO:0007628 eggNOG:COG5184 GO:GO:0030514 InterPro:IPR012983
Pfam:PF08005 InterPro:IPR017868 PROSITE:PS50194 EMBL:AF262977
EMBL:AY113376 RefSeq:NP_511159.3 UniGene:Dm.3259
ProteinModelPortal:Q9NB71 SMR:Q9NB71 IntAct:Q9NB71 STRING:Q9NB71
EnsemblMetazoa:FBtr0073970 GeneID:32429 KEGG:dme:Dmel_CG32592
UCSC:CG32592-RA CTD:32429 FlyBase:FBgn0030600
GeneTree:ENSGT00390000011403 InParanoid:Q9NB71 KO:K10693
OMA:DAQCQEY OrthoDB:EOG4ZPC91 PhylomeDB:Q9NB71 ChiTaRS:hiw
GenomeRNAi:32429 NextBio:778423 Bgee:Q9NB71 GermOnline:CG32592
PANTHER:PTHR12846 Uniprot:Q9NB71
Length = 5233
Score = 165 (63.1 bits), Expect = 2.6e-12, Sum P(3) = 2.6e-12
Identities = 53/146 (36%), Positives = 71/146 (48%)
Query: 197 GQLGRGITCEGLQGPRVI-KGYAKFLDEAPELEKIT------QVSCGEYHSAAVSENGEV 249
G+L G G P + K + AP+L ++T QV+CG +H+ ++ GEV
Sbjct: 928 GELETGAAGGGAATPTDLDKDPPRVAPLAPQLLQLTSSSPVVQVACGLHHTVVLTLAGEV 987
Query: 250 YTWGLGSVGQLGHCSLQ--SGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAW 307
YT+G GQLG LQ SG P RV + G I VA G H+ LTSKG +Y +
Sbjct: 988 YTFGSNQYGQLGSGDLQPVSG-----PVRV-QVPGA-ISQVAAGSNHTVLLTSKGMVYTF 1040
Query: 308 GGSQAGQLGLGPQTRSFSLIPNESDT 333
G Q GQLG P P + D+
Sbjct: 1041 GNYQKGQLGRLPSDYGLKPPPQDDDS 1066
Score = 123 (48.4 bits), Expect = 8.3e-08, Sum P(3) = 8.3e-08
Identities = 36/109 (33%), Positives = 49/109 (44%)
Query: 285 IKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILV-V 343
+ VACG H+ LT G +Y +G +Q GQLG G L P P+ V V
Sbjct: 968 VVQVACGLHHTVVLTLAGEVYTFGSNQYGQLGSG------DLQPVSG-------PVRVQV 1014
Query: 344 PNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVD 392
P + VA G +HT++ G ++ +G GQ S Y P P D
Sbjct: 1015 PGAISQVAAGSNHTVLLTSKGMVYTFGNYQKGQLGRLPSDYGLKPPPQD 1063
Score = 107 (42.7 bits), Expect = 2.6e-12, Sum P(3) = 2.6e-12
Identities = 37/141 (26%), Positives = 63/141 (44%)
Query: 67 IACGHE--HTAAVASDGTLFTWGANEFGQLGDGTEEGRK----HPEKVKQLQSEFVKSIS 120
+A GH+ H V DGT+F G G+ GD ++ R+ P+K+ ++ V +
Sbjct: 654 VAVGHDGIHALLVNDDGTVFFAGTARRGEDGDSSKNRRQPKAVKPKKMTKIDGHVVVHAA 713
Query: 121 CGAHCTAAIAEPRENDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVV 180
C +A + + T +L ++G++ F + +V+ G H V
Sbjct: 714 CNNGTSAFVTK---------TGKLIMYGKDTAHCDAMGFVSELLEQHVT-KVALGKAHCV 763
Query: 181 ALSECGLLQAWGYNEYGQLGR 201
AL+ G L ++G N GQ GR
Sbjct: 764 ALNAKGQLFSFGLNNKGQCGR 784
Score = 86 (35.3 bits), Expect = 0.00047, Sum P(3) = 0.00047
Identities = 21/62 (33%), Positives = 31/62 (50%)
Query: 350 VACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSA 409
VACG HT+V G ++ +G N YGQ + P V G + ++AAG H+
Sbjct: 971 VACGLHHTVVLTLAGEVYTFGSNQYGQLGSGDLQPVSGPVRVQ-VPGAISQVAAGSNHTV 1029
Query: 410 VL 411
+L
Sbjct: 1030 LL 1031
Score = 74 (31.1 bits), Expect = 0.00016, Sum P(3) = 0.00016
Identities = 14/42 (33%), Positives = 28/42 (66%)
Query: 220 FLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLG 261
F+ E E + +T+V+ G+ H A++ G+++++GL + GQ G
Sbjct: 743 FVSELLE-QHVTKVALGKAHCVALNAKGQLFSFGLNNKGQCG 783
Score = 49 (22.3 bits), Expect = 1.8e-06, Sum P(3) = 1.8e-06
Identities = 12/33 (36%), Positives = 19/33 (57%)
Query: 19 AKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPP 51
AK ++ +G N+ GQ GR + L+ K +PP
Sbjct: 767 AKGQLFSFGLNNKGQCGRIFNK--LQPVKDVPP 797
Score = 42 (19.8 bits), Expect = 2.6e-12, Sum P(3) = 2.6e-12
Identities = 10/26 (38%), Positives = 14/26 (53%)
Query: 411 LADACSLKELCEFRLAESVTLSNASE 436
LAD+ +LK + EFR +S E
Sbjct: 4879 LADSKTLKAMVEFRDGSHTIISGPQE 4904
>FB|FBgn0045980 [details] [associations]
symbol:niki "nimA-like kinase" species:7227 "Drosophila
melanogaster" [GO:0004702 "receptor signaling protein
serine/threonine kinase activity" evidence=ISS;NAS] [GO:0006468
"protein phosphorylation" evidence=IEA;NAS] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0048812 "neuron projection
morphogenesis" evidence=IMP] InterPro:IPR000719 InterPro:IPR002290
InterPro:IPR008271 InterPro:IPR011009 InterPro:IPR017441
Pfam:PF00069 PROSITE:PS00107 PROSITE:PS00108 PROSITE:PS50011
SMART:SM00220 INTERPRO:IPR000408 Pfam:PF00415 EMBL:AE014297
GO:GO:0005524 eggNOG:COG0515 SUPFAM:SSF56112 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004702 HSSP:O14965
PRINTS:PR00633 PROSITE:PS50012 KO:K08857
GeneTree:ENSGT00700000104137 RefSeq:NP_651293.1 UniGene:Dm.27397
ProteinModelPortal:Q9VC32 SMR:Q9VC32 PRIDE:Q9VC32
EnsemblMetazoa:FBtr0084737 GeneID:42959 KEGG:dme:Dmel_CG10951
UCSC:CG10951-RA CTD:42959 FlyBase:FBgn0045980 InParanoid:Q9VC32
OMA:WRHYPTK OrthoDB:EOG4FJ6QP PhylomeDB:Q9VC32 GenomeRNAi:42959
NextBio:831528 ArrayExpress:Q9VC32 Bgee:Q9VC32 Uniprot:Q9VC32
Length = 841
Score = 198 (74.8 bits), Expect = 2.7e-12, P = 2.7e-12
Identities = 71/261 (27%), Positives = 114/261 (43%)
Query: 65 LDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKH-PEKVKQLQSEFVKSISCGA 123
+D+A H V DG+ + WG GQLG E KH P +++ +++ V S G
Sbjct: 455 VDVAMSDSHFVVVNEDGSAYAWGEGTHGQLGLTALEAWKHYPSRMESVRNYHVVSACAGD 514
Query: 124 HCTAAIAEPRENDGTISTSRLWVWGQNQGSNF--PRLFWGAFTPNTIICQVSCGSVHVVA 181
T + + S + L + GQ++ N+ P+L A + + QV+ G HV+A
Sbjct: 515 GFTILVTQAGSLLSCGSNAHLAL-GQDEQRNYHSPKLI--ARLADVRVEQVAAGLQHVLA 571
Query: 182 LSECGLLQAWGYNEYGQLGRGITCEGLQGP-RVIKGYAKFLDEAPELEKITQVSCGEYHS 240
LS G + WG + G LG G + + P +++ + K K +++ CG S
Sbjct: 572 LSREGAVYVWGTSTCGALGLGNYQQQQKFPQKILLSHVK--------TKPSKIYCGPDTS 623
Query: 241 AAVSENGEVYTWGLGSVGQLGH---CSLQSGDKELLPRRVVALDGIFIKDVAC-GGVHSC 296
A + NGE++ G +LG + + K LP +V AC HS
Sbjct: 624 AVLFANGELHVCGSNDYNKLGFQRSAKITAFKKVQLPHKVTQ---------ACFSSTHSV 674
Query: 297 ALTSKGALYAWGGSQAGQLGL 317
L G +Y G + GQ G+
Sbjct: 675 FLVEGGYVYTMGRNAEGQRGI 695
Score = 164 (62.8 bits), Expect = 1.5e-08, P = 1.5e-08
Identities = 53/218 (24%), Positives = 89/218 (40%)
Query: 165 PNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEA 224
P +I V+ H V ++E G AWG +GQLG L K Y ++
Sbjct: 450 PKAVIVDVAMSDSHFVVVNEDGSAYAWGEGTHGQLG-------LTALEAWKHYPSRMESV 502
Query: 225 PELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIF 284
+ G+ + V++ G + + G + LG ++ P+ + L +
Sbjct: 503 RNYH-VVSACAGDGFTILVTQAGSLLSCGSNAHLALGQDEQRNYHS---PKLIARLADVR 558
Query: 285 IKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVP 344
++ VA G H AL+ +GA+Y WG S G LGLG + + + I + V
Sbjct: 559 VEQVAAGLQHVLALSREGAVYVWGTSTCGALGLGNY--------QQQQKFPQKILLSHVK 610
Query: 345 NGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKS 382
+ CG + V +G +H G N Y + ++S
Sbjct: 611 TKPSKIYCGPDTSAVLFANGELHVCGSNDYNKLGFQRS 648
Score = 153 (58.9 bits), Expect = 2.3e-07, P = 2.3e-07
Identities = 73/301 (24%), Positives = 112/301 (37%)
Query: 24 YVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGTL 83
Y WG GQ G E P ++ + N + G T V G+L
Sbjct: 474 YAWGEGTHGQLGLTALEAWKHYPSRME-------SVRNYHVVSACAGDGFTILVTQAGSL 526
Query: 84 FTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND----GTI 139
+ G+N LG + P+ + +L V+ ++ G A++ RE GT
Sbjct: 527 LSCGSNAHLALGQDEQRNYHSPKLIARLADVRVEQVAAGLQHVLALS--REGAVYVWGTS 584
Query: 140 STSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQL 199
+ L + Q FP+ + T ++ CG L G L G N+Y +L
Sbjct: 585 TCGALGLGNYQQQQKFPQKILLSHV-KTKPSKIYCGPDTSAVLFANGELHVCGSNDYNKL 643
Query: 200 GRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQ 259
G Q I + K + P K+TQ HS + E G VYT G + GQ
Sbjct: 644 G-------FQRSAKITAFKKV--QLPH--KVTQACFSSTHSVFLVEGGYVYTMGRNAEGQ 692
Query: 260 LG--HCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGL 317
G HC+ S D P V ++ +I C + + + WG ++ G G+
Sbjct: 693 RGIRHCN--SVDH---PTLVDSVKSRYIVKANCSDQCTIVASEDNIITVWG-TRNGLPGI 746
Query: 318 G 318
G
Sbjct: 747 G 747
Score = 127 (49.8 bits), Expect = 0.00016, P = 0.00016
Identities = 41/155 (26%), Positives = 66/155 (42%)
Query: 223 EAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDG 282
+ P I V+ + H V+E+G Y WG G+ GQLG +L++ P R+ ++
Sbjct: 447 QLPPKAVIVDVAMSDSHFVVVNEDGSAYAWGEGTHGQLGLTALEAWKH--YPSRMESVRN 504
Query: 283 IFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFS--LIPNESDTYFRNIPI 340
+ G + +T G+L + G + LG Q S LI +D
Sbjct: 505 YHVVSACAGDGFTILVTQAGSLLSCGSNAHLALGQDEQRNYHSPKLIARLADVR------ 558
Query: 341 LVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYG 375
V+ VA G H L R+G ++ WG ++ G
Sbjct: 559 ------VEQVAAGLQHVLALSREGAVYVWGTSTCG 587
>UNIPROTKB|E1BH40 [details] [associations]
symbol:MYCBP2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0051493 "regulation of cytoskeleton organization"
evidence=IEA] [GO:0042803 "protein homodimerization activity"
evidence=IEA] [GO:0032880 "regulation of protein localization"
evidence=IEA] [GO:0030424 "axon" evidence=IEA] [GO:0021952 "central
nervous system projection neuron axonogenesis" evidence=IEA]
[GO:0021785 "branchiomotor neuron axon guidance" evidence=IEA]
[GO:0015630 "microtubule cytoskeleton" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0004842 "ubiquitin-protein
ligase activity" evidence=IEA] InterPro:IPR001841
InterPro:IPR027047 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
INTERPRO:IPR000408 Pfam:PF00415 Gene3D:2.60.40.10
InterPro:IPR013783 GO:GO:0015630 GO:GO:0046872 GO:GO:0030424
GO:GO:0008270 GO:GO:0032880 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0021952 Gene3D:3.30.40.10 InterPro:IPR014756
InterPro:IPR013083 SUPFAM:SSF81296 InterPro:IPR008979
SUPFAM:SSF49785 GO:GO:0051493 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 InterPro:IPR004939 PROSITE:PS51284
InterPro:IPR012983 Pfam:PF08005 InterPro:IPR017868 Pfam:PF00630
PROSITE:PS50194 GeneTree:ENSGT00390000011403 KO:K10693
PANTHER:PTHR12846 CTD:23077 GO:GO:0021785 OMA:LLSILHW
EMBL:DAAA02033607 EMBL:DAAA02033608 EMBL:DAAA02033609
EMBL:DAAA02033610 IPI:IPI00705654 RefSeq:NP_001179746.1
UniGene:Bt.105085 Ensembl:ENSBTAT00000025100 GeneID:534496
KEGG:bta:534496 NextBio:20876421 Uniprot:E1BH40
Length = 4640
Score = 159 (61.0 bits), Expect = 3.3e-12, Sum P(4) = 3.3e-12
Identities = 39/91 (42%), Positives = 50/91 (54%)
Query: 226 ELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFI 285
EL + QVSCG +HS + ENG+VYT+G G GQLGH + S P V AL G
Sbjct: 901 ELRAV-QVSCGFHHSVVLMENGDVYTFGYGQHGQLGHGDVNSRG---CPTLVQALPGPST 956
Query: 286 KDVACGGVHSCALTSKGALYAWGGSQAGQLG 316
+ V G H+ AL G ++ +G GQLG
Sbjct: 957 Q-VTAGSNHTAALLMDGQVFTFGSFSKGQLG 986
Score = 110 (43.8 bits), Expect = 3.3e-12, Sum P(4) = 3.3e-12
Identities = 46/181 (25%), Positives = 84/181 (46%)
Query: 57 PAGANSRWLDIACGHE--HTAAVASDGTLFTWGANEFGQLGDGTEEGRKH----PEKVKQ 110
P + + + + GH+ H VA DG++F G+ G+ G+ T+ R+ P+K+ +
Sbjct: 537 PITKSPKIVHFSVGHDGSHALLVAEDGSIFFTGSASKGEDGESTKSRRQSKPYKPKKIIK 596
Query: 111 LQSEFVKSISCGAHCTAAIAEPRENDGTISTSRLWVWGQNQ-GSNFPRLFWGAFTPNTII 169
++ + V +C ++ I++ DG L+++G++ S+ L +
Sbjct: 597 MEGKIVVYTACNNGSSSVISK----DG-----ELYMFGKDAIYSDSSSLVTDL--KGHFV 645
Query: 170 CQVSCGSVHVVALSECGLLQAWGYNEYGQLGR--GITCEGLQGPRVIKGYAKFLDEAPEL 227
QV+ G H L + G + +G N GQ GR G +G +G V + A +DE E
Sbjct: 646 TQVAMGKAHTCVLMKNGEVWTFGVNNKGQCGRDTGAMNQGGKGFGV-ENMATAMDEDLEE 704
Query: 228 E 228
E
Sbjct: 705 E 705
Score = 98 (39.6 bits), Expect = 7.7e-06, Sum P(4) = 7.7e-06
Identities = 31/91 (34%), Positives = 40/91 (43%)
Query: 288 VACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILV--VPN 345
V+CG HS L G +Y +G Q GQLG G D R P LV +P
Sbjct: 907 VSCGFHHSVVLMENGDVYTFGYGQHGQLGHG-------------DVNSRGCPTLVQALPG 953
Query: 346 GVQLVACGHSHTLVYMRDGRIHGWGYNSYGQ 376
V G +HT + DG++ +G S GQ
Sbjct: 954 PSTQVTAGSNHTAALLMDGQVFTFGSFSKGQ 984
Score = 95 (38.5 bits), Expect = 0.00025, Sum P(3) = 0.00025
Identities = 31/120 (25%), Positives = 50/120 (41%)
Query: 197 GQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGS 256
G +G E + R K Y E + + +C S+ +S++GE+Y +G +
Sbjct: 569 GSASKGEDGESTKSRRQSKPYKPKKIIKMEGKIVVYTACNNGSSSVISKDGELYMFGKDA 628
Query: 257 VGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLG 316
+ D L V L G F+ VA G H+C L G ++ +G + GQ G
Sbjct: 629 I---------YSDSSSL---VTDLKGHFVTQVAMGKAHTCVLMKNGEVWTFGVNNKGQCG 676
Score = 93 (37.8 bits), Expect = 6.7e-06, Sum P(3) = 6.7e-06
Identities = 19/62 (30%), Positives = 32/62 (51%)
Query: 350 VACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSA 409
V+CG H++V M +G ++ +GY +GQ + P+ V G ++ AG H+A
Sbjct: 907 VSCGFHHSVVLMENGDVYTFGYGQHGQLGHGDVNSRGCPTLVQALPGPSTQVTAGSNHTA 966
Query: 410 VL 411
L
Sbjct: 967 AL 968
Score = 91 (37.1 bits), Expect = 0.00062, Sum P(3) = 0.00062
Identities = 22/83 (26%), Positives = 40/83 (48%)
Query: 229 KITQVSCGE--YHSAAVSENGEVYTWGLGSVGQLGHCSL-QSGDKELLPRRVVALDGIFI 285
KI S G H+ V+E+G ++ G S G+ G + + K P++++ ++G +
Sbjct: 543 KIVHFSVGHDGSHALLVAEDGSIFFTGSASKGEDGESTKSRRQSKPYKPKKIIKMEGKIV 602
Query: 286 KDVACGGVHSCALTSKGALYAWG 308
AC S ++ G LY +G
Sbjct: 603 VYTACNNGSSSVISKDGELYMFG 625
Score = 49 (22.3 bits), Expect = 3.3e-12, Sum P(4) = 3.3e-12
Identities = 15/46 (32%), Positives = 26/46 (56%)
Query: 411 LADACSLKELCEFRLAESVTLSNASEI-EDVASRTGSE--ALARLC 453
LAD+ ++K + EFR +++SE SR+G+E A+ +C
Sbjct: 4291 LADSKTMKAMVEFREHTGKPTTSSSEACRFCGSRSGTELSAVGSVC 4336
Score = 40 (19.1 bits), Expect = 3.3e-12, Sum P(4) = 3.3e-12
Identities = 7/20 (35%), Positives = 11/20 (55%)
Query: 396 GEVRKLAAGGGHSAVLADAC 415
GE+ +LA GG + + C
Sbjct: 3187 GEMAQLAVGGPEKDTICELC 3206
Score = 39 (18.8 bits), Expect = 2.9e-05, Sum P(4) = 2.9e-05
Identities = 6/14 (42%), Positives = 10/14 (71%)
Query: 23 IYVWGYNHSGQTGR 36
++ +G N+ GQ GR
Sbjct: 664 VWTFGVNNKGQCGR 677
Score = 37 (18.1 bits), Expect = 1.3e-11, Sum P(3) = 1.3e-11
Identities = 12/36 (33%), Positives = 14/36 (38%)
Query: 393 WCVGEVRKLAAGGGHSAVLADACSLKELCEFRLAES 428
W GE K+A S C + L FRL S
Sbjct: 3834 WKDGESTKIAGQISASVAQQRNCEAETLRVFRLITS 3869
>UNIPROTKB|F1NZF2 [details] [associations]
symbol:MYCBP2 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0015630 "microtubule cytoskeleton" evidence=IEA] [GO:0021785
"branchiomotor neuron axon guidance" evidence=IEA] [GO:0021952
"central nervous system projection neuron axonogenesis"
evidence=IEA] [GO:0030424 "axon" evidence=IEA] [GO:0032880
"regulation of protein localization" evidence=IEA] [GO:0042803
"protein homodimerization activity" evidence=IEA] [GO:0051493
"regulation of cytoskeleton organization" evidence=IEA]
InterPro:IPR001841 InterPro:IPR027047 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 INTERPRO:IPR000408 Pfam:PF00415 Gene3D:2.60.40.10
InterPro:IPR013783 GO:GO:0015630 GO:GO:0046872 GO:GO:0030424
GO:GO:0008270 GO:GO:0032880 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 Gene3D:3.30.40.10 InterPro:IPR014756
InterPro:IPR013083 SUPFAM:SSF81296 InterPro:IPR008979
SUPFAM:SSF49785 GO:GO:0051493 PRINTS:PR00633 PROSITE:PS50012
InterPro:IPR004939 PROSITE:PS51284 InterPro:IPR012983 Pfam:PF08005
InterPro:IPR017868 Pfam:PF00630 PROSITE:PS50194
GeneTree:ENSGT00390000011403 PANTHER:PTHR12846 OMA:LLSILHW
EMBL:AC149787 EMBL:AADN02042674 IPI:IPI00599046
Ensembl:ENSGALT00000027346 Uniprot:F1NZF2
Length = 4580
Score = 153 (58.9 bits), Expect = 4.3e-12, Sum P(3) = 4.3e-12
Identities = 38/91 (41%), Positives = 49/91 (53%)
Query: 226 ELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFI 285
EL + QVSCG +HS + ENG+VYT+G G GQLGH + S P V AL G
Sbjct: 839 ELRAV-QVSCGFHHSVILMENGDVYTFGYGQHGQLGHGDVNSRG---CPTLVQALPGPST 894
Query: 286 KDVACGGVHSCALTSKGALYAWGGSQAGQLG 316
+ V G H+ L G ++ +G GQLG
Sbjct: 895 Q-VTAGSNHTAILLMDGQVFTFGSFSKGQLG 924
Score = 119 (46.9 bits), Expect = 4.3e-12, Sum P(3) = 4.3e-12
Identities = 53/209 (25%), Positives = 96/209 (45%)
Query: 31 SGQTGRKGRERQLRIPKQLPP--ELFGCPAGANSRWLDIACGHE--HTAAVASDGTLFTW 86
SG+ G+ + L I + P + P + + + + GH+ H VA DG++F
Sbjct: 447 SGKIYYTGKYQSLGIKQGGPSAGKWVELPITKSPKIIQFSVGHDGSHALLVADDGSIFFT 506
Query: 87 GANEFGQLGDGTEEGRKH----PEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
G+ G+ G+ T+ R+ P+K+ +++ + V S +C ++ I++ DG
Sbjct: 507 GSASKGEDGESTKSRRQSKPYKPKKIIKMEGKIVISTACNNGSSSVISK----DG----- 557
Query: 143 RLWVWGQNQ-GSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGR 201
L+++G++ S+ L + QV+ G H L + G + +G N GQ GR
Sbjct: 558 ELYMFGKDAIYSDSTSLVTDL--KGHFVTQVAMGKAHTCVLMKNGEVWTFGVNNKGQCGR 615
Query: 202 --GITCEGLQGPRVIKGYAKFLDEAPELE 228
G +G +G V + A +DE E E
Sbjct: 616 DTGSMSQGGKGFGV-ENMATAMDEDLEEE 643
Score = 100 (40.3 bits), Expect = 1.3e-06, Sum P(4) = 1.3e-06
Identities = 31/91 (34%), Positives = 41/91 (45%)
Query: 288 VACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILV--VPN 345
V+CG HS L G +Y +G Q GQLG G D R P LV +P
Sbjct: 845 VSCGFHHSVILMENGDVYTFGYGQHGQLGHG-------------DVNSRGCPTLVQALPG 891
Query: 346 GVQLVACGHSHTLVYMRDGRIHGWGYNSYGQ 376
V G +HT + + DG++ +G S GQ
Sbjct: 892 PSTQVTAGSNHTAILLMDGQVFTFGSFSKGQ 922
Score = 95 (38.5 bits), Expect = 1.2e-06, Sum P(3) = 1.2e-06
Identities = 18/62 (29%), Positives = 33/62 (53%)
Query: 350 VACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSA 409
V+CG H+++ M +G ++ +GY +GQ + P+ V G ++ AG H+A
Sbjct: 845 VSCGFHHSVILMENGDVYTFGYGQHGQLGHGDVNSRGCPTLVQALPGPSTQVTAGSNHTA 904
Query: 410 VL 411
+L
Sbjct: 905 IL 906
Score = 94 (38.1 bits), Expect = 0.00047, Sum P(3) = 0.00047
Identities = 31/120 (25%), Positives = 50/120 (41%)
Query: 197 GQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGS 256
G +G E + R K Y E + + +C S+ +S++GE+Y +G +
Sbjct: 507 GSASKGEDGESTKSRRQSKPYKPKKIIKMEGKIVISTACNNGSSSVISKDGELYMFGKDA 566
Query: 257 VGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLG 316
+ D L V L G F+ VA G H+C L G ++ +G + GQ G
Sbjct: 567 I---------YSDSTSL---VTDLKGHFVTQVAMGKAHTCVLMKNGEVWTFGVNNKGQCG 614
Score = 45 (20.9 bits), Expect = 4.4e-12, Sum P(4) = 4.4e-12
Identities = 14/46 (30%), Positives = 25/46 (54%)
Query: 411 LADACSLKELCEFRLAESVTLSNASEI-EDVASRTGSE--ALARLC 453
LAD+ ++K + EFR +++SE R+G+E A+ +C
Sbjct: 4231 LADSKTMKAMVEFREQTGKPTTSSSEACRFCGCRSGTELSAVGSVC 4276
Score = 40 (19.1 bits), Expect = 4.4e-12, Sum P(4) = 4.4e-12
Identities = 7/20 (35%), Positives = 11/20 (55%)
Query: 396 GEVRKLAAGGGHSAVLADAC 415
GE+ +LA GG + + C
Sbjct: 3127 GEMAQLAVGGPEKDTICELC 3146
Score = 39 (18.8 bits), Expect = 4.3e-12, Sum P(3) = 4.3e-12
Identities = 20/77 (25%), Positives = 23/77 (29%)
Query: 393 WCVGEVRKLAAGGGHSAVLADACSLKELCEFRLAESVTLSNASEIEDVASRTGSEALARL 452
W GE K+A S C + L FRL S D E A L
Sbjct: 3774 WKDGESIKIAGQISASVAQQRNCESETLRVFRLITSQVFGKLIS-GDAEPTPEQEEKALL 3832
Query: 453 CERLREHSLHGDEFDCD 469
E +H D D
Sbjct: 3833 SSPEGEEKVHNATSDAD 3849
Score = 39 (18.8 bits), Expect = 0.00028, Sum P(4) = 0.00028
Identities = 6/14 (42%), Positives = 10/14 (71%)
Query: 23 IYVWGYNHSGQTGR 36
++ +G N+ GQ GR
Sbjct: 602 VWTFGVNNKGQCGR 615
>MGI|MGI:2179432 [details] [associations]
symbol:Mycbp2 "MYC binding protein 2" species:10090 "Mus
musculus" [GO:0005515 "protein binding" evidence=IPI] [GO:0005634
"nucleus" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0008045 "motor neuron axon
guidance" evidence=IMP] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0015630 "microtubule cytoskeleton" evidence=IDA]
[GO:0016874 "ligase activity" evidence=IEA] [GO:0021785
"branchiomotor neuron axon guidance" evidence=IMP] [GO:0021952
"central nervous system projection neuron axonogenesis"
evidence=IMP] [GO:0030424 "axon" evidence=IDA] [GO:0032880
"regulation of protein localization" evidence=IMP] [GO:0042803
"protein homodimerization activity" evidence=IPI] [GO:0046872
"metal ion binding" evidence=IEA] [GO:0048667 "cell morphogenesis
involved in neuron differentiation" evidence=IMP] [GO:0051493
"regulation of cytoskeleton organization" evidence=IMP]
InterPro:IPR001841 InterPro:IPR027047 Pfam:PF13639 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 UniPathway:UPA00143 MGI:MGI:2179432
INTERPRO:IPR000408 Pfam:PF00415 Prosite:PS00518 GO:GO:0005634
Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0015630 GO:GO:0006355
GO:GO:0046872 GO:GO:0016874 GO:GO:0030424 GO:GO:0008270
GO:GO:0032880 GO:GO:0006351 GO:GO:0016567 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0021952 Gene3D:3.30.40.10
InterPro:IPR014756 InterPro:IPR013083 SUPFAM:SSF81296
InterPro:IPR008979 SUPFAM:SSF49785 GO:GO:0051493 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 CleanEx:MM_PAM
InterPro:IPR004939 PROSITE:PS51284 InterPro:IPR012983 Pfam:PF08005
InterPro:IPR017868 Pfam:PF00630 PROSITE:PS50194 KO:K10693
PANTHER:PTHR12846 CTD:23077 eggNOG:NOG240798 HOVERGEN:HBG053153
OrthoDB:EOG4VQ9NB ChiTaRS:MYCBP2 GO:GO:0021785 EMBL:AY325887
EMBL:BC059257 IPI:IPI00380409 IPI:IPI00608114 RefSeq:NP_997098.2
UniGene:Mm.6478 PDB:3GBW PDB:3HWJ PDBsum:3GBW PDBsum:3HWJ
ProteinModelPortal:Q7TPH6 SMR:Q7TPH6 IntAct:Q7TPH6 STRING:Q7TPH6
PhosphoSite:Q7TPH6 PaxDb:Q7TPH6 PRIDE:Q7TPH6 DNASU:105689
GeneID:105689 KEGG:mmu:105689 UCSC:uc007uwl.1 HOGENOM:HOG000112908
InParanoid:Q7TPH6 EvolutionaryTrace:Q7TPH6 NextBio:357830
CleanEx:MM_MYCBP2 Genevestigator:Q7TPH6
GermOnline:ENSMUSG00000033004 Uniprot:Q7TPH6
Length = 4711
Score = 158 (60.7 bits), Expect = 4.5e-12, Sum P(4) = 4.5e-12
Identities = 38/91 (41%), Positives = 49/91 (53%)
Query: 226 ELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFI 285
EL + QVSCG +HS + ENG+VYT+G G GQLGH + S P V AL G
Sbjct: 901 ELRAV-QVSCGFHHSVVLMENGDVYTFGYGQHGQLGHGDVNSRG---CPTLVQALPGPST 956
Query: 286 KDVACGGVHSCALTSKGALYAWGGSQAGQLG 316
+ AC H+ L G ++ +G GQLG
Sbjct: 957 QVTACSN-HTAVLLMDGQVFTFGSFSKGQLG 986
Score = 110 (43.8 bits), Expect = 4.5e-12, Sum P(4) = 4.5e-12
Identities = 46/181 (25%), Positives = 85/181 (46%)
Query: 57 PAGANSRWLDIACGHE--HTAAVASDGTLFTWGANEFGQLGDGTEEGRKH----PEKVKQ 110
P + + + + GH+ H VA DG++F G+ G+ G+ T+ R+ P+K+ +
Sbjct: 537 PITKSPKIVHFSVGHDGSHALLVAEDGSVFFTGSASKGEDGESTKSRRQSKPYKPKKIIK 596
Query: 111 LQSEFVKSISCGAHCTAAIAEPRENDGTISTSRLWVWGQNQ-GSNFPRLFWGAFTPNTII 169
++ + V +C ++ I++ DG L+++G++ S+ L + +
Sbjct: 597 MEGKIVVYTACNNGSSSVISK----DG-----ELYMFGKDAIYSDSSSLV--SDLKGHFV 645
Query: 170 CQVSCGSVHVVALSECGLLQAWGYNEYGQLGR--GITCEGLQGPRVIKGYAKFLDEAPEL 227
QV+ G H L + G + +G N GQ GR G +G +G V + A +DE E
Sbjct: 646 TQVAMGKAHTCVLMKNGEVWTFGVNNKGQCGRDTGAMNQGGKGFGV-ENMATAMDEDLEE 704
Query: 228 E 228
E
Sbjct: 705 E 705
Score = 101 (40.6 bits), Expect = 4.2e-06, Sum P(4) = 4.2e-06
Identities = 33/92 (35%), Positives = 43/92 (46%)
Query: 288 VACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILV--VPN 345
V+CG HS L G +Y +G Q GQLG G D R P LV +P
Sbjct: 907 VSCGFHHSVVLMENGDVYTFGYGQHGQLGHG-------------DVNSRGCPTLVQALPG 953
Query: 346 -GVQLVACGHSHTLVYMRDGRIHGWGYNSYGQ 376
Q+ AC + HT V + DG++ +G S GQ
Sbjct: 954 PSTQVTACSN-HTAVLLMDGQVFTFGSFSKGQ 984
Score = 88 (36.0 bits), Expect = 2.2e-05, Sum P(3) = 2.2e-05
Identities = 19/62 (30%), Positives = 32/62 (51%)
Query: 350 VACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSA 409
V+CG H++V M +G ++ +GY +GQ + P+ V G ++ A H+A
Sbjct: 907 VSCGFHHSVVLMENGDVYTFGYGQHGQLGHGDVNSRGCPTLVQALPGPSTQVTACSNHTA 966
Query: 410 VL 411
VL
Sbjct: 967 VL 968
Score = 49 (22.3 bits), Expect = 4.5e-12, Sum P(4) = 4.5e-12
Identities = 15/46 (32%), Positives = 26/46 (56%)
Query: 411 LADACSLKELCEFRLAESVTLSNASEI-EDVASRTGSE--ALARLC 453
LAD+ ++K + EFR +++SE SR+G+E A+ +C
Sbjct: 4362 LADSKTMKAMVEFREHTGKPTTSSSEACRFCGSRSGTELSAVGSVC 4407
Score = 40 (19.1 bits), Expect = 4.5e-12, Sum P(4) = 4.5e-12
Identities = 7/20 (35%), Positives = 11/20 (55%)
Query: 396 GEVRKLAAGGGHSAVLADAC 415
GE+ +LA GG + + C
Sbjct: 3259 GEMAQLAVGGPEKDTICELC 3278
Score = 40 (19.1 bits), Expect = 8.6e-12, Sum P(3) = 8.6e-12
Identities = 12/36 (33%), Positives = 15/36 (41%)
Query: 393 WCVGEVRKLAAGGGHSAVLADACSLKELCEFRLAES 428
W GE K+A S +C + L FRL S
Sbjct: 3905 WKDGESTKIAGQISASVAQQRSCEAETLRVFRLITS 3940
Score = 39 (18.8 bits), Expect = 3.9e-05, Sum P(4) = 3.9e-05
Identities = 6/14 (42%), Positives = 10/14 (71%)
Query: 23 IYVWGYNHSGQTGR 36
++ +G N+ GQ GR
Sbjct: 664 VWTFGVNNKGQCGR 677
>UNIPROTKB|F1PB36 [details] [associations]
symbol:MYCBP2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
InterPro:IPR001841 InterPro:IPR027047 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 INTERPRO:IPR000408 Pfam:PF00415 Gene3D:2.60.40.10
InterPro:IPR013783 GO:GO:0046872 GO:GO:0008270 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 Gene3D:3.30.40.10
InterPro:IPR014756 InterPro:IPR013083 SUPFAM:SSF81296
InterPro:IPR008979 SUPFAM:SSF49785 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 InterPro:IPR004939 PROSITE:PS51284
InterPro:IPR012983 Pfam:PF08005 InterPro:IPR017868 Pfam:PF00630
PROSITE:PS50194 GeneTree:ENSGT00390000011403 PANTHER:PTHR12846
EMBL:AAEX03013255 EMBL:AAEX03013256 EMBL:AAEX03013257
Ensembl:ENSCAFT00000008311 Uniprot:F1PB36
Length = 4640
Score = 155 (59.6 bits), Expect = 7.0e-12, Sum P(4) = 7.0e-12
Identities = 38/91 (41%), Positives = 49/91 (53%)
Query: 226 ELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFI 285
EL + QVSCG +HS + ENG+VYT+G G GQLGH + S P V AL G
Sbjct: 901 ELRAV-QVSCGFHHSVVLMENGDVYTFGYGQHGQLGHGDVNSRG---CPTLVQALPGPST 956
Query: 286 KDVACGGVHSCALTSKGALYAWGGSQAGQLG 316
+ V G H+ L G ++ +G GQLG
Sbjct: 957 Q-VTAGSNHTAVLLMDGQVFTFGSFSKGQLG 986
Score = 111 (44.1 bits), Expect = 7.0e-12, Sum P(4) = 7.0e-12
Identities = 52/209 (24%), Positives = 95/209 (45%)
Query: 31 SGQTGRKGRERQLRIPKQLPP--ELFGCPAGANSRWLDIACGHE--HTAAVASDGTLFTW 86
SG+ G+ + L I + P + P + + + + GH+ H VA DG++F
Sbjct: 509 SGKIYYTGKYQSLGIKQGGPSAGKWVELPITKSPKIVHFSVGHDGSHALLVAEDGSIFFT 568
Query: 87 GANEFGQLGDGTEEGRKH----PEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
G+ G+ G+ T+ R+ P+K+ +++ + V +C ++ I++ DG
Sbjct: 569 GSASKGEDGESTKSRRQSKPYKPKKIIKMEGKIVVYTACNNGSSSVISK----DG----- 619
Query: 143 RLWVWGQNQ-GSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGR 201
L+++G++ S+ L + QV+ G H L + G + +G N GQ GR
Sbjct: 620 ELYMFGKDAIYSDSSSLVTDL--KGHFVTQVAMGKAHTCVLMKNGEVWTFGVNNKGQCGR 677
Query: 202 --GITCEGLQGPRVIKGYAKFLDEAPELE 228
G +G +G V + A +DE E E
Sbjct: 678 DTGAMNQGGKGFGV-ENMATAMDEDLEEE 705
Score = 102 (41.0 bits), Expect = 2.5e-06, Sum P(4) = 2.5e-06
Identities = 32/91 (35%), Positives = 41/91 (45%)
Query: 288 VACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILV--VPN 345
V+CG HS L G +Y +G Q GQLG G D R P LV +P
Sbjct: 907 VSCGFHHSVVLMENGDVYTFGYGQHGQLGHG-------------DVNSRGCPTLVQALPG 953
Query: 346 GVQLVACGHSHTLVYMRDGRIHGWGYNSYGQ 376
V G +HT V + DG++ +G S GQ
Sbjct: 954 PSTQVTAGSNHTAVLLMDGQVFTFGSFSKGQ 984
Score = 97 (39.2 bits), Expect = 2.1e-06, Sum P(3) = 2.1e-06
Identities = 20/62 (32%), Positives = 33/62 (53%)
Query: 350 VACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSA 409
V+CG H++V M +G ++ +GY +GQ + P+ V G ++ AG H+A
Sbjct: 907 VSCGFHHSVVLMENGDVYTFGYGQHGQLGHGDVNSRGCPTLVQALPGPSTQVTAGSNHTA 966
Query: 410 VL 411
VL
Sbjct: 967 VL 968
Score = 95 (38.5 bits), Expect = 9.7e-05, Sum P(3) = 9.7e-05
Identities = 31/120 (25%), Positives = 50/120 (41%)
Query: 197 GQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGS 256
G +G E + R K Y E + + +C S+ +S++GE+Y +G +
Sbjct: 569 GSASKGEDGESTKSRRQSKPYKPKKIIKMEGKIVVYTACNNGSSSVISKDGELYMFGKDA 628
Query: 257 VGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLG 316
+ D L V L G F+ VA G H+C L G ++ +G + GQ G
Sbjct: 629 I---------YSDSSSL---VTDLKGHFVTQVAMGKAHTCVLMKNGEVWTFGVNNKGQCG 676
Score = 91 (37.1 bits), Expect = 0.00024, Sum P(3) = 0.00024
Identities = 22/83 (26%), Positives = 40/83 (48%)
Query: 229 KITQVSCGE--YHSAAVSENGEVYTWGLGSVGQLGHCSL-QSGDKELLPRRVVALDGIFI 285
KI S G H+ V+E+G ++ G S G+ G + + K P++++ ++G +
Sbjct: 543 KIVHFSVGHDGSHALLVAEDGSIFFTGSASKGEDGESTKSRRQSKPYKPKKIIKMEGKIV 602
Query: 286 KDVACGGVHSCALTSKGALYAWG 308
AC S ++ G LY +G
Sbjct: 603 VYTACNNGSSSVISKDGELYMFG 625
Score = 49 (22.3 bits), Expect = 7.0e-12, Sum P(4) = 7.0e-12
Identities = 15/46 (32%), Positives = 26/46 (56%)
Query: 411 LADACSLKELCEFRLAESVTLSNASEI-EDVASRTGSE--ALARLC 453
LAD+ ++K + EFR +++SE SR+G+E A+ +C
Sbjct: 4291 LADSKTMKAMVEFREHTGKPTTSSSEACRFCGSRSGTELSAVGSVC 4336
Score = 40 (19.1 bits), Expect = 7.0e-12, Sum P(4) = 7.0e-12
Identities = 7/20 (35%), Positives = 11/20 (55%)
Query: 396 GEVRKLAAGGGHSAVLADAC 415
GE+ +LA GG + + C
Sbjct: 3187 GEMAQLAVGGPEKDTICELC 3206
Score = 39 (18.8 bits), Expect = 7.6e-05, Sum P(4) = 7.6e-05
Identities = 6/14 (42%), Positives = 10/14 (71%)
Query: 23 IYVWGYNHSGQTGR 36
++ +G N+ GQ GR
Sbjct: 664 VWTFGVNNKGQCGR 677
Score = 37 (18.1 bits), Expect = 2.8e-11, Sum P(3) = 2.8e-11
Identities = 12/36 (33%), Positives = 14/36 (38%)
Query: 393 WCVGEVRKLAAGGGHSAVLADACSLKELCEFRLAES 428
W GE K+A S C + L FRL S
Sbjct: 3834 WKDGESTKIAGQISASVAQQRNCEAETLRVFRLITS 3869
>UNIPROTKB|J9PB77 [details] [associations]
symbol:MYCBP2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
InterPro:IPR001841 InterPro:IPR027047 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 INTERPRO:IPR000408 Pfam:PF00415 Gene3D:2.60.40.10
InterPro:IPR013783 GO:GO:0046872 GO:GO:0008270 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 Gene3D:3.30.40.10
InterPro:IPR014756 InterPro:IPR013083 SUPFAM:SSF81296
InterPro:IPR008979 SUPFAM:SSF49785 PROSITE:PS00626 PROSITE:PS50012
InterPro:IPR004939 PROSITE:PS51284 InterPro:IPR012983 Pfam:PF08005
InterPro:IPR017868 Pfam:PF00630 PROSITE:PS50194
GeneTree:ENSGT00390000011403 PANTHER:PTHR12846 OMA:LLSILHW
EMBL:AAEX03013255 EMBL:AAEX03013256 EMBL:AAEX03013257
Ensembl:ENSCAFT00000044597 Uniprot:J9PB77
Length = 4727
Score = 155 (59.6 bits), Expect = 7.6e-12, Sum P(4) = 7.6e-12
Identities = 38/91 (41%), Positives = 49/91 (53%)
Query: 226 ELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFI 285
EL + QVSCG +HS + ENG+VYT+G G GQLGH + S P V AL G
Sbjct: 939 ELRAV-QVSCGFHHSVVLMENGDVYTFGYGQHGQLGHGDVNSRG---CPTLVQALPGPST 994
Query: 286 KDVACGGVHSCALTSKGALYAWGGSQAGQLG 316
+ V G H+ L G ++ +G GQLG
Sbjct: 995 Q-VTAGSNHTAVLLMDGQVFTFGSFSKGQLG 1024
Score = 111 (44.1 bits), Expect = 7.6e-12, Sum P(4) = 7.6e-12
Identities = 52/209 (24%), Positives = 95/209 (45%)
Query: 31 SGQTGRKGRERQLRIPKQLPP--ELFGCPAGANSRWLDIACGHE--HTAAVASDGTLFTW 86
SG+ G+ + L I + P + P + + + + GH+ H VA DG++F
Sbjct: 547 SGKIYYTGKYQSLGIKQGGPSAGKWVELPITKSPKIVHFSVGHDGSHALLVAEDGSIFFT 606
Query: 87 GANEFGQLGDGTEEGRKH----PEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
G+ G+ G+ T+ R+ P+K+ +++ + V +C ++ I++ DG
Sbjct: 607 GSASKGEDGESTKSRRQSKPYKPKKIIKMEGKIVVYTACNNGSSSVISK----DG----- 657
Query: 143 RLWVWGQNQ-GSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGR 201
L+++G++ S+ L + QV+ G H L + G + +G N GQ GR
Sbjct: 658 ELYMFGKDAIYSDSSSLVTDL--KGHFVTQVAMGKAHTCVLMKNGEVWTFGVNNKGQCGR 715
Query: 202 --GITCEGLQGPRVIKGYAKFLDEAPELE 228
G +G +G V + A +DE E E
Sbjct: 716 DTGAMNQGGKGFGV-ENMATAMDEDLEEE 743
Score = 102 (41.0 bits), Expect = 2.7e-06, Sum P(4) = 2.7e-06
Identities = 32/91 (35%), Positives = 41/91 (45%)
Query: 288 VACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILV--VPN 345
V+CG HS L G +Y +G Q GQLG G D R P LV +P
Sbjct: 945 VSCGFHHSVVLMENGDVYTFGYGQHGQLGHG-------------DVNSRGCPTLVQALPG 991
Query: 346 GVQLVACGHSHTLVYMRDGRIHGWGYNSYGQ 376
V G +HT V + DG++ +G S GQ
Sbjct: 992 PSTQVTAGSNHTAVLLMDGQVFTFGSFSKGQ 1022
Score = 97 (39.2 bits), Expect = 2.2e-06, Sum P(3) = 2.2e-06
Identities = 20/62 (32%), Positives = 33/62 (53%)
Query: 350 VACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSA 409
V+CG H++V M +G ++ +GY +GQ + P+ V G ++ AG H+A
Sbjct: 945 VSCGFHHSVVLMENGDVYTFGYGQHGQLGHGDVNSRGCPTLVQALPGPSTQVTAGSNHTA 1004
Query: 410 VL 411
VL
Sbjct: 1005 VL 1006
Score = 95 (38.5 bits), Expect = 0.00010, Sum P(3) = 0.00010
Identities = 31/120 (25%), Positives = 50/120 (41%)
Query: 197 GQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGS 256
G +G E + R K Y E + + +C S+ +S++GE+Y +G +
Sbjct: 607 GSASKGEDGESTKSRRQSKPYKPKKIIKMEGKIVVYTACNNGSSSVISKDGELYMFGKDA 666
Query: 257 VGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLG 316
+ D L V L G F+ VA G H+C L G ++ +G + GQ G
Sbjct: 667 I---------YSDSSSL---VTDLKGHFVTQVAMGKAHTCVLMKNGEVWTFGVNNKGQCG 714
Score = 91 (37.1 bits), Expect = 0.00025, Sum P(3) = 0.00025
Identities = 22/83 (26%), Positives = 40/83 (48%)
Query: 229 KITQVSCGE--YHSAAVSENGEVYTWGLGSVGQLGHCSL-QSGDKELLPRRVVALDGIFI 285
KI S G H+ V+E+G ++ G S G+ G + + K P++++ ++G +
Sbjct: 581 KIVHFSVGHDGSHALLVAEDGSIFFTGSASKGEDGESTKSRRQSKPYKPKKIIKMEGKIV 640
Query: 286 KDVACGGVHSCALTSKGALYAWG 308
AC S ++ G LY +G
Sbjct: 641 VYTACNNGSSSVISKDGELYMFG 663
Score = 49 (22.3 bits), Expect = 7.6e-12, Sum P(4) = 7.6e-12
Identities = 15/46 (32%), Positives = 26/46 (56%)
Query: 411 LADACSLKELCEFRLAESVTLSNASEI-EDVASRTGSE--ALARLC 453
LAD+ ++K + EFR +++SE SR+G+E A+ +C
Sbjct: 4378 LADSKTMKAMVEFREHTGKPTTSSSEACRFCGSRSGTELSAVGSVC 4423
Score = 40 (19.1 bits), Expect = 7.6e-12, Sum P(4) = 7.6e-12
Identities = 7/20 (35%), Positives = 11/20 (55%)
Query: 396 GEVRKLAAGGGHSAVLADAC 415
GE+ +LA GG + + C
Sbjct: 3277 GEMAQLAVGGPEKDTICELC 3296
Score = 39 (18.8 bits), Expect = 8.2e-05, Sum P(4) = 8.2e-05
Identities = 6/14 (42%), Positives = 10/14 (71%)
Query: 23 IYVWGYNHSGQTGR 36
++ +G N+ GQ GR
Sbjct: 702 VWTFGVNNKGQCGR 715
Score = 37 (18.1 bits), Expect = 2.9e-11, Sum P(3) = 2.9e-11
Identities = 12/36 (33%), Positives = 14/36 (38%)
Query: 393 WCVGEVRKLAAGGGHSAVLADACSLKELCEFRLAES 428
W GE K+A S C + L FRL S
Sbjct: 3924 WKDGESTKIAGQISASVAQQRNCEAETLRVFRLITS 3959
>UNIPROTKB|F1RP77 [details] [associations]
symbol:MYCBP2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0051493 "regulation of cytoskeleton organization"
evidence=IEA] [GO:0042803 "protein homodimerization activity"
evidence=IEA] [GO:0032880 "regulation of protein localization"
evidence=IEA] [GO:0030424 "axon" evidence=IEA] [GO:0021952 "central
nervous system projection neuron axonogenesis" evidence=IEA]
[GO:0021785 "branchiomotor neuron axon guidance" evidence=IEA]
[GO:0015630 "microtubule cytoskeleton" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0004842 "ubiquitin-protein
ligase activity" evidence=IEA] InterPro:IPR001841
InterPro:IPR027047 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
INTERPRO:IPR000408 Pfam:PF00415 Gene3D:2.60.40.10
InterPro:IPR013783 GO:GO:0015630 GO:GO:0046872 GO:GO:0030424
GO:GO:0008270 GO:GO:0032880 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0021952 Gene3D:3.30.40.10 InterPro:IPR014756
InterPro:IPR013083 SUPFAM:SSF81296 InterPro:IPR008979
SUPFAM:SSF49785 GO:GO:0051493 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 InterPro:IPR004939 PROSITE:PS51284
InterPro:IPR012983 Pfam:PF08005 InterPro:IPR017868 Pfam:PF00630
PROSITE:PS50194 GeneTree:ENSGT00390000011403 PANTHER:PTHR12846
GO:GO:0021785 OMA:LLSILHW EMBL:CU457401 EMBL:CT978653 EMBL:CU041349
Ensembl:ENSSSCT00000010386 Uniprot:F1RP77
Length = 4460
Score = 155 (59.6 bits), Expect = 7.6e-12, Sum P(4) = 7.6e-12
Identities = 38/91 (41%), Positives = 49/91 (53%)
Query: 226 ELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFI 285
EL + QVSCG +HS + ENG+VYT+G G GQLGH + S P V AL G
Sbjct: 814 ELRAV-QVSCGFHHSVVLMENGDVYTFGYGQHGQLGHGDVNSRG---CPTLVQALPGPST 869
Query: 286 KDVACGGVHSCALTSKGALYAWGGSQAGQLG 316
+ V G H+ L G ++ +G GQLG
Sbjct: 870 Q-VTAGSNHTAVLLMDGQVFTFGSFSKGQLG 899
Score = 110 (43.8 bits), Expect = 7.6e-12, Sum P(4) = 7.6e-12
Identities = 46/181 (25%), Positives = 84/181 (46%)
Query: 57 PAGANSRWLDIACGHE--HTAAVASDGTLFTWGANEFGQLGDGTEEGRKH----PEKVKQ 110
P + + + + GH+ H VA DG++F G+ G+ G+ T+ R+ P+K+ +
Sbjct: 450 PITKSPKIVHFSVGHDGSHALLVAEDGSIFFTGSASKGEDGESTKSRRQSKPYKPKKIIK 509
Query: 111 LQSEFVKSISCGAHCTAAIAEPRENDGTISTSRLWVWGQNQ-GSNFPRLFWGAFTPNTII 169
++ + V +C ++ I++ DG L+++G++ S+ L +
Sbjct: 510 MEGKIVVYTACNNGSSSVISK----DG-----ELYMFGKDAIYSDSSSLVTDL--KGHFV 558
Query: 170 CQVSCGSVHVVALSECGLLQAWGYNEYGQLGR--GITCEGLQGPRVIKGYAKFLDEAPEL 227
QV+ G H L + G + +G N GQ GR G +G +G V + A +DE E
Sbjct: 559 TQVAMGKAHTCVLMKNGEVWTFGVNNKGQCGRDTGAMNQGGKGFGV-ENMATAMDEDLEE 617
Query: 228 E 228
E
Sbjct: 618 E 618
Score = 102 (41.0 bits), Expect = 2.7e-06, Sum P(4) = 2.7e-06
Identities = 32/91 (35%), Positives = 41/91 (45%)
Query: 288 VACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILV--VPN 345
V+CG HS L G +Y +G Q GQLG G D R P LV +P
Sbjct: 820 VSCGFHHSVVLMENGDVYTFGYGQHGQLGHG-------------DVNSRGCPTLVQALPG 866
Query: 346 GVQLVACGHSHTLVYMRDGRIHGWGYNSYGQ 376
V G +HT V + DG++ +G S GQ
Sbjct: 867 PSTQVTAGSNHTAVLLMDGQVFTFGSFSKGQ 897
Score = 97 (39.2 bits), Expect = 2.4e-06, Sum P(3) = 2.4e-06
Identities = 20/62 (32%), Positives = 33/62 (53%)
Query: 350 VACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSA 409
V+CG H++V M +G ++ +GY +GQ + P+ V G ++ AG H+A
Sbjct: 820 VSCGFHHSVVLMENGDVYTFGYGQHGQLGHGDVNSRGCPTLVQALPGPSTQVTAGSNHTA 879
Query: 410 VL 411
VL
Sbjct: 880 VL 881
Score = 95 (38.5 bits), Expect = 8.6e-05, Sum P(3) = 8.6e-05
Identities = 31/120 (25%), Positives = 50/120 (41%)
Query: 197 GQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGS 256
G +G E + R K Y E + + +C S+ +S++GE+Y +G +
Sbjct: 482 GSASKGEDGESTKSRRQSKPYKPKKIIKMEGKIVVYTACNNGSSSVISKDGELYMFGKDA 541
Query: 257 VGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLG 316
+ D L V L G F+ VA G H+C L G ++ +G + GQ G
Sbjct: 542 I---------YSDSSSL---VTDLKGHFVTQVAMGKAHTCVLMKNGEVWTFGVNNKGQCG 589
Score = 91 (37.1 bits), Expect = 0.00021, Sum P(3) = 0.00021
Identities = 22/83 (26%), Positives = 40/83 (48%)
Query: 229 KITQVSCGE--YHSAAVSENGEVYTWGLGSVGQLGHCSL-QSGDKELLPRRVVALDGIFI 285
KI S G H+ V+E+G ++ G S G+ G + + K P++++ ++G +
Sbjct: 456 KIVHFSVGHDGSHALLVAEDGSIFFTGSASKGEDGESTKSRRQSKPYKPKKIIKMEGKIV 515
Query: 286 KDVACGGVHSCALTSKGALYAWG 308
AC S ++ G LY +G
Sbjct: 516 VYTACNNGSSSVISKDGELYMFG 538
Score = 49 (22.3 bits), Expect = 7.6e-12, Sum P(4) = 7.6e-12
Identities = 15/46 (32%), Positives = 26/46 (56%)
Query: 411 LADACSLKELCEFRLAESVTLSNASEI-EDVASRTGSE--ALARLC 453
LAD+ ++K + EFR +++SE SR+G+E A+ +C
Sbjct: 4204 LADSKTMKAMVEFREHTGKPTTSSSEACRFCGSRSGTELSAVGSVC 4249
Score = 40 (19.1 bits), Expect = 7.6e-12, Sum P(4) = 7.6e-12
Identities = 7/20 (35%), Positives = 11/20 (55%)
Query: 396 GEVRKLAAGGGHSAVLADAC 415
GE+ +LA GG + + C
Sbjct: 3100 GEMAQLAVGGPEKDTICELC 3119
Score = 39 (18.8 bits), Expect = 6.6e-05, Sum P(4) = 6.6e-05
Identities = 6/14 (42%), Positives = 10/14 (71%)
Query: 23 IYVWGYNHSGQTGR 36
++ +G N+ GQ GR
Sbjct: 577 VWTFGVNNKGQCGR 590
Score = 37 (18.1 bits), Expect = 3.1e-11, Sum P(3) = 3.1e-11
Identities = 12/36 (33%), Positives = 14/36 (38%)
Query: 393 WCVGEVRKLAAGGGHSAVLADACSLKELCEFRLAES 428
W GE K+A S C + L FRL S
Sbjct: 3747 WKDGESTKIAGQISASVAQQRNCEAETLRVFRLITS 3782
>UNIPROTKB|O75592 [details] [associations]
symbol:MYCBP2 "Probable E3 ubiquitin-protein ligase MYCBP2"
species:9606 "Homo sapiens" [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0015630 "microtubule cytoskeleton"
evidence=IEA] [GO:0021785 "branchiomotor neuron axon guidance"
evidence=IEA] [GO:0021952 "central nervous system projection neuron
axonogenesis" evidence=IEA] [GO:0030424 "axon" evidence=IEA]
[GO:0032880 "regulation of protein localization" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0051493 "regulation of cytoskeleton organization" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR001841
InterPro:IPR027047 Pfam:PF13639 PROSITE:PS50089 PROSITE:PS50119
SMART:SM00184 UniPathway:UPA00143 INTERPRO:IPR000408 Pfam:PF00415
Prosite:PS00518 GO:GO:0005634 Gene3D:2.60.40.10 InterPro:IPR013783
GO:GO:0015630 GO:GO:0006355 GO:GO:0046872 GO:GO:0016874
GO:GO:0030424 GO:GO:0008270 GO:GO:0032880 GO:GO:0006351
GO:GO:0016567 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
GO:GO:0021952 Gene3D:3.30.40.10 InterPro:IPR014756
InterPro:IPR013083 SUPFAM:SSF81296 InterPro:IPR008979
SUPFAM:SSF49785 GO:GO:0051493 PRINTS:PR00633 PROSITE:PS00625
PROSITE:PS00626 PROSITE:PS50012 CleanEx:HS_PAM InterPro:IPR004939
PROSITE:PS51284 InterPro:IPR012983 Pfam:PF08005 EMBL:AC001226
InterPro:IPR017868 EMBL:CH471093 PROSITE:PS50194 KO:K10693
PANTHER:PTHR12846 EMBL:AF075587 EMBL:AL159154 EMBL:AL159158
EMBL:AL359257 EMBL:AB020723 EMBL:BC037971 EMBL:AF083244
IPI:IPI00289776 IPI:IPI01014189 RefSeq:NP_055872.4
UniGene:Hs.591221 ProteinModelPortal:O75592 SMR:O75592
DIP:DIP-28142N IntAct:O75592 MINT:MINT-1632199 STRING:O75592
PhosphoSite:O75592 PaxDb:O75592 PRIDE:O75592
Ensembl:ENST00000357337 Ensembl:ENST00000544440 GeneID:23077
KEGG:hsa:23077 UCSC:uc010aev.3 CTD:23077 GeneCards:GC13M077618
HGNC:HGNC:23386 HPA:HPA039945 MIM:610392 neXtProt:NX_O75592
PharmGKB:PA134871126 eggNOG:NOG240798 HOVERGEN:HBG053153
InParanoid:O75592 OrthoDB:EOG4VQ9NB ChiTaRS:MYCBP2 GenomeRNAi:23077
NextBio:44191 ArrayExpress:O75592 Bgee:O75592 CleanEx:HS_MYCBP2
Genevestigator:O75592 GermOnline:ENSG00000005810 GO:GO:0021785
Uniprot:O75592
Length = 4640
Score = 155 (59.6 bits), Expect = 8.9e-12, Sum P(4) = 8.9e-12
Identities = 38/91 (41%), Positives = 49/91 (53%)
Query: 226 ELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFI 285
EL + QVSCG +HS + ENG+VYT+G G GQLGH + S P V AL G
Sbjct: 901 ELRAV-QVSCGFHHSVVLMENGDVYTFGYGQHGQLGHGDVNSRG---CPTLVQALPGPST 956
Query: 286 KDVACGGVHSCALTSKGALYAWGGSQAGQLG 316
+ V G H+ L G ++ +G GQLG
Sbjct: 957 Q-VTAGSNHTAVLLMDGQVFTFGSFSKGQLG 986
Score = 110 (43.8 bits), Expect = 8.9e-12, Sum P(4) = 8.9e-12
Identities = 46/181 (25%), Positives = 84/181 (46%)
Query: 57 PAGANSRWLDIACGHE--HTAAVASDGTLFTWGANEFGQLGDGTEEGRKH----PEKVKQ 110
P + + + + GH+ H VA DG++F G+ G+ G+ T+ R+ P+K+ +
Sbjct: 537 PITKSPKIVHFSVGHDGSHALLVAEDGSIFFTGSASKGEDGESTKSRRQSKPYKPKKIIK 596
Query: 111 LQSEFVKSISCGAHCTAAIAEPRENDGTISTSRLWVWGQNQ-GSNFPRLFWGAFTPNTII 169
++ + V +C ++ I++ DG L+++G++ S+ L +
Sbjct: 597 MEGKIVVYTACNNGSSSVISK----DG-----ELYMFGKDAIYSDSSSLVTDL--KGHFV 645
Query: 170 CQVSCGSVHVVALSECGLLQAWGYNEYGQLGR--GITCEGLQGPRVIKGYAKFLDEAPEL 227
QV+ G H L + G + +G N GQ GR G +G +G V + A +DE E
Sbjct: 646 TQVAMGKAHTCVLMKNGEVWTFGVNNKGQCGRDTGAMNQGGKGFGV-ENMATAMDEDLEE 704
Query: 228 E 228
E
Sbjct: 705 E 705
Score = 102 (41.0 bits), Expect = 3.2e-06, Sum P(4) = 3.2e-06
Identities = 32/91 (35%), Positives = 41/91 (45%)
Query: 288 VACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILV--VPN 345
V+CG HS L G +Y +G Q GQLG G D R P LV +P
Sbjct: 907 VSCGFHHSVVLMENGDVYTFGYGQHGQLGHG-------------DVNSRGCPTLVQALPG 953
Query: 346 GVQLVACGHSHTLVYMRDGRIHGWGYNSYGQ 376
V G +HT V + DG++ +G S GQ
Sbjct: 954 PSTQVTAGSNHTAVLLMDGQVFTFGSFSKGQ 984
Score = 97 (39.2 bits), Expect = 2.7e-06, Sum P(3) = 2.7e-06
Identities = 20/62 (32%), Positives = 33/62 (53%)
Query: 350 VACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSA 409
V+CG H++V M +G ++ +GY +GQ + P+ V G ++ AG H+A
Sbjct: 907 VSCGFHHSVVLMENGDVYTFGYGQHGQLGHGDVNSRGCPTLVQALPGPSTQVTAGSNHTA 966
Query: 410 VL 411
VL
Sbjct: 967 VL 968
Score = 95 (38.5 bits), Expect = 9.7e-05, Sum P(3) = 9.7e-05
Identities = 31/120 (25%), Positives = 50/120 (41%)
Query: 197 GQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGS 256
G +G E + R K Y E + + +C S+ +S++GE+Y +G +
Sbjct: 569 GSASKGEDGESTKSRRQSKPYKPKKIIKMEGKIVVYTACNNGSSSVISKDGELYMFGKDA 628
Query: 257 VGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLG 316
+ D L V L G F+ VA G H+C L G ++ +G + GQ G
Sbjct: 629 I---------YSDSSSL---VTDLKGHFVTQVAMGKAHTCVLMKNGEVWTFGVNNKGQCG 676
Score = 91 (37.1 bits), Expect = 0.00024, Sum P(3) = 0.00024
Identities = 22/83 (26%), Positives = 40/83 (48%)
Query: 229 KITQVSCGE--YHSAAVSENGEVYTWGLGSVGQLGHCSL-QSGDKELLPRRVVALDGIFI 285
KI S G H+ V+E+G ++ G S G+ G + + K P++++ ++G +
Sbjct: 543 KIVHFSVGHDGSHALLVAEDGSIFFTGSASKGEDGESTKSRRQSKPYKPKKIIKMEGKIV 602
Query: 286 KDVACGGVHSCALTSKGALYAWG 308
AC S ++ G LY +G
Sbjct: 603 VYTACNNGSSSVISKDGELYMFG 625
Score = 49 (22.3 bits), Expect = 8.9e-12, Sum P(4) = 8.9e-12
Identities = 15/46 (32%), Positives = 26/46 (56%)
Query: 411 LADACSLKELCEFRLAESVTLSNASEI-EDVASRTGSE--ALARLC 453
LAD+ ++K + EFR +++SE SR+G+E A+ +C
Sbjct: 4291 LADSKTMKAMVEFREHTGKPTTSSSEACRFCGSRSGTELSAVGSVC 4336
Score = 40 (19.1 bits), Expect = 8.9e-12, Sum P(4) = 8.9e-12
Identities = 7/20 (35%), Positives = 11/20 (55%)
Query: 396 GEVRKLAAGGGHSAVLADAC 415
GE+ +LA GG + + C
Sbjct: 3187 GEMAQLAVGGPEKDTICELC 3206
Score = 39 (18.8 bits), Expect = 7.6e-05, Sum P(4) = 7.6e-05
Identities = 6/14 (42%), Positives = 10/14 (71%)
Query: 23 IYVWGYNHSGQTGR 36
++ +G N+ GQ GR
Sbjct: 664 VWTFGVNNKGQCGR 677
Score = 37 (18.1 bits), Expect = 3.5e-11, Sum P(3) = 3.5e-11
Identities = 12/36 (33%), Positives = 14/36 (38%)
Query: 393 WCVGEVRKLAAGGGHSAVLADACSLKELCEFRLAES 428
W GE K+A S C + L FRL S
Sbjct: 3834 WKDGESTKIAGQISASVAQQRNCEAETLRVFRLITS 3869
>UNIPROTKB|J3KPZ3 [details] [associations]
symbol:MYCBP2 "Probable E3 ubiquitin-protein ligase MYCBP2"
species:9606 "Homo sapiens" [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR027047 Pfam:PF13639
PROSITE:PS50089 SMART:SM00184 INTERPRO:IPR000408 Pfam:PF00415
Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0046872 GO:GO:0008270
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
Gene3D:3.30.40.10 InterPro:IPR014756 InterPro:IPR013083
SUPFAM:SSF81296 InterPro:IPR008979 SUPFAM:SSF49785 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 InterPro:IPR004939 PROSITE:PS51284
InterPro:IPR012983 Pfam:PF08005 EMBL:AC001226 InterPro:IPR017868
PROSITE:PS50194 KO:K10693 PANTHER:PTHR12846 EMBL:AL159154
EMBL:AL159158 EMBL:AL359257 RefSeq:NP_055872.4 UniGene:Hs.591221
GeneID:23077 KEGG:hsa:23077 CTD:23077 HGNC:HGNC:23386
ChiTaRS:MYCBP2 OMA:LLSILHW ProteinModelPortal:J3KPZ3
Ensembl:ENST00000407578 Uniprot:J3KPZ3
Length = 4678
Score = 155 (59.6 bits), Expect = 9.1e-12, Sum P(4) = 9.1e-12
Identities = 38/91 (41%), Positives = 49/91 (53%)
Query: 226 ELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFI 285
EL + QVSCG +HS + ENG+VYT+G G GQLGH + S P V AL G
Sbjct: 939 ELRAV-QVSCGFHHSVVLMENGDVYTFGYGQHGQLGHGDVNSRG---CPTLVQALPGPST 994
Query: 286 KDVACGGVHSCALTSKGALYAWGGSQAGQLG 316
+ V G H+ L G ++ +G GQLG
Sbjct: 995 Q-VTAGSNHTAVLLMDGQVFTFGSFSKGQLG 1024
Score = 110 (43.8 bits), Expect = 9.1e-12, Sum P(4) = 9.1e-12
Identities = 46/181 (25%), Positives = 84/181 (46%)
Query: 57 PAGANSRWLDIACGHE--HTAAVASDGTLFTWGANEFGQLGDGTEEGRKH----PEKVKQ 110
P + + + + GH+ H VA DG++F G+ G+ G+ T+ R+ P+K+ +
Sbjct: 575 PITKSPKIVHFSVGHDGSHALLVAEDGSIFFTGSASKGEDGESTKSRRQSKPYKPKKIIK 634
Query: 111 LQSEFVKSISCGAHCTAAIAEPRENDGTISTSRLWVWGQNQ-GSNFPRLFWGAFTPNTII 169
++ + V +C ++ I++ DG L+++G++ S+ L +
Sbjct: 635 MEGKIVVYTACNNGSSSVISK----DG-----ELYMFGKDAIYSDSSSLVTDL--KGHFV 683
Query: 170 CQVSCGSVHVVALSECGLLQAWGYNEYGQLGR--GITCEGLQGPRVIKGYAKFLDEAPEL 227
QV+ G H L + G + +G N GQ GR G +G +G V + A +DE E
Sbjct: 684 TQVAMGKAHTCVLMKNGEVWTFGVNNKGQCGRDTGAMNQGGKGFGV-ENMATAMDEDLEE 742
Query: 228 E 228
E
Sbjct: 743 E 743
Score = 102 (41.0 bits), Expect = 3.3e-06, Sum P(4) = 3.3e-06
Identities = 32/91 (35%), Positives = 41/91 (45%)
Query: 288 VACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILV--VPN 345
V+CG HS L G +Y +G Q GQLG G D R P LV +P
Sbjct: 945 VSCGFHHSVVLMENGDVYTFGYGQHGQLGHG-------------DVNSRGCPTLVQALPG 991
Query: 346 GVQLVACGHSHTLVYMRDGRIHGWGYNSYGQ 376
V G +HT V + DG++ +G S GQ
Sbjct: 992 PSTQVTAGSNHTAVLLMDGQVFTFGSFSKGQ 1022
Score = 97 (39.2 bits), Expect = 2.8e-06, Sum P(3) = 2.8e-06
Identities = 20/62 (32%), Positives = 33/62 (53%)
Query: 350 VACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSA 409
V+CG H++V M +G ++ +GY +GQ + P+ V G ++ AG H+A
Sbjct: 945 VSCGFHHSVVLMENGDVYTFGYGQHGQLGHGDVNSRGCPTLVQALPGPSTQVTAGSNHTA 1004
Query: 410 VL 411
VL
Sbjct: 1005 VL 1006
Score = 95 (38.5 bits), Expect = 9.9e-05, Sum P(3) = 9.9e-05
Identities = 31/120 (25%), Positives = 50/120 (41%)
Query: 197 GQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGS 256
G +G E + R K Y E + + +C S+ +S++GE+Y +G +
Sbjct: 607 GSASKGEDGESTKSRRQSKPYKPKKIIKMEGKIVVYTACNNGSSSVISKDGELYMFGKDA 666
Query: 257 VGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLG 316
+ D L V L G F+ VA G H+C L G ++ +G + GQ G
Sbjct: 667 I---------YSDSSSL---VTDLKGHFVTQVAMGKAHTCVLMKNGEVWTFGVNNKGQCG 714
Score = 91 (37.1 bits), Expect = 0.00025, Sum P(3) = 0.00025
Identities = 22/83 (26%), Positives = 40/83 (48%)
Query: 229 KITQVSCGE--YHSAAVSENGEVYTWGLGSVGQLGHCSL-QSGDKELLPRRVVALDGIFI 285
KI S G H+ V+E+G ++ G S G+ G + + K P++++ ++G +
Sbjct: 581 KIVHFSVGHDGSHALLVAEDGSIFFTGSASKGEDGESTKSRRQSKPYKPKKIIKMEGKIV 640
Query: 286 KDVACGGVHSCALTSKGALYAWG 308
AC S ++ G LY +G
Sbjct: 641 VYTACNNGSSSVISKDGELYMFG 663
Score = 49 (22.3 bits), Expect = 9.1e-12, Sum P(4) = 9.1e-12
Identities = 15/46 (32%), Positives = 26/46 (56%)
Query: 411 LADACSLKELCEFRLAESVTLSNASEI-EDVASRTGSE--ALARLC 453
LAD+ ++K + EFR +++SE SR+G+E A+ +C
Sbjct: 4329 LADSKTMKAMVEFREHTGKPTTSSSEACRFCGSRSGTELSAVGSVC 4374
Score = 40 (19.1 bits), Expect = 9.1e-12, Sum P(4) = 9.1e-12
Identities = 7/20 (35%), Positives = 11/20 (55%)
Query: 396 GEVRKLAAGGGHSAVLADAC 415
GE+ +LA GG + + C
Sbjct: 3225 GEMAQLAVGGPEKDTICELC 3244
Score = 39 (18.8 bits), Expect = 7.9e-05, Sum P(4) = 7.9e-05
Identities = 6/14 (42%), Positives = 10/14 (71%)
Query: 23 IYVWGYNHSGQTGR 36
++ +G N+ GQ GR
Sbjct: 702 VWTFGVNNKGQCGR 715
Score = 37 (18.1 bits), Expect = 3.6e-11, Sum P(3) = 3.6e-11
Identities = 12/36 (33%), Positives = 14/36 (38%)
Query: 393 WCVGEVRKLAAGGGHSAVLADACSLKELCEFRLAES 428
W GE K+A S C + L FRL S
Sbjct: 3872 WKDGESTKIAGQISASVAQQRNCEAETLRVFRLITS 3907
>UNIPROTKB|D4A2D3 [details] [associations]
symbol:Mycbp2 "Protein Mycbp2" species:10116 "Rattus
norvegicus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR027047 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 RGD:1312048 INTERPRO:IPR000408 Pfam:PF00415
Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0015630 GO:GO:0046872
GO:GO:0030424 GO:GO:0008270 GO:GO:0032880 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0021952 Gene3D:3.30.40.10
InterPro:IPR014756 InterPro:IPR013083 SUPFAM:SSF81296
InterPro:IPR008979 SUPFAM:SSF49785 GO:GO:0051493 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 InterPro:IPR004939 PROSITE:PS51284
InterPro:IPR012983 Pfam:PF08005 InterPro:IPR017868 Pfam:PF00630
PROSITE:PS50194 GeneTree:ENSGT00390000011403 PANTHER:PTHR12846
OrthoDB:EOG4VQ9NB GO:GO:0021785 IPI:IPI00765932
ProteinModelPortal:D4A2D3 Ensembl:ENSRNOT00000014583
ArrayExpress:D4A2D3 Uniprot:D4A2D3
Length = 4715
Score = 155 (59.6 bits), Expect = 1.9e-11, Sum P(4) = 1.9e-11
Identities = 36/88 (40%), Positives = 47/88 (53%)
Query: 229 KITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDV 288
+ QVSCG +HS + ENG+VYT+G G GQLGH + S P V AL G + V
Sbjct: 903 RAVQVSCGFHHSVVLMENGDVYTFGYGQHGQLGHGDVNSRG---CPTLVQALPGPSTQ-V 958
Query: 289 ACGGVHSCALTSKGALYAWGGSQAGQLG 316
G H+ L G ++ +G GQLG
Sbjct: 959 TAGSNHTAVLVMDGQVFTFGSFSKGQLG 986
Score = 107 (42.7 bits), Expect = 1.9e-11, Sum P(4) = 1.9e-11
Identities = 47/178 (26%), Positives = 79/178 (44%)
Query: 57 PAGANSRWLDIACGHE--HTAAVASDGTLFTWGANEFGQLGDGTEEGRKH-PEKVKQLQS 113
P + + + + GH+ H VA DG++F G+ G+ G+ + R+ P K K++
Sbjct: 537 PITKSPKIVHFSVGHDGSHALLVAEDGSVFFTGSASKGEDGESAKSRRQSKPYKPKKIIK 596
Query: 114 EFVKSISCGAHCTAAIAEPRENDGTISTSRLWVWGQNQ-GSNFPRLFWGAFTPNTIICQV 172
K + C A C + DG L+++G++ S+ L + + QV
Sbjct: 597 MEGKIVVCTA-CNNGSSSVISKDG-----ELYMFGKDAIYSDSSSLV--SDLKGHFVTQV 648
Query: 173 SCGSVHVVALSECGLLQAWGYNEYGQLGR--GITCEGLQGPRVIKGYAKFLDEAPELE 228
+ G H L + G + +G N GQ GR G +G +G V + A +DE E E
Sbjct: 649 AMGKAHTCVLMKNGEVWTFGVNNKGQCGRDTGAMNQGGKGFGV-ENMATAMDEDLEEE 705
Score = 101 (40.6 bits), Expect = 8.6e-06, Sum P(4) = 8.6e-06
Identities = 32/91 (35%), Positives = 41/91 (45%)
Query: 288 VACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILV--VPN 345
V+CG HS L G +Y +G Q GQLG G D R P LV +P
Sbjct: 907 VSCGFHHSVVLMENGDVYTFGYGQHGQLGHG-------------DVNSRGCPTLVQALPG 953
Query: 346 GVQLVACGHSHTLVYMRDGRIHGWGYNSYGQ 376
V G +HT V + DG++ +G S GQ
Sbjct: 954 PSTQVTAGSNHTAVLVMDGQVFTFGSFSKGQ 984
Score = 97 (39.2 bits), Expect = 5.8e-06, Sum P(3) = 5.8e-06
Identities = 20/62 (32%), Positives = 33/62 (53%)
Query: 350 VACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSA 409
V+CG H++V M +G ++ +GY +GQ + P+ V G ++ AG H+A
Sbjct: 907 VSCGFHHSVVLMENGDVYTFGYGQHGQLGHGDVNSRGCPTLVQALPGPSTQVTAGSNHTA 966
Query: 410 VL 411
VL
Sbjct: 967 VL 968
Score = 92 (37.4 bits), Expect = 0.00020, Sum P(3) = 0.00020
Identities = 23/83 (27%), Positives = 40/83 (48%)
Query: 229 KITQVSCGE--YHSAAVSENGEVYTWGLGSVGQLGHCSL-QSGDKELLPRRVVALDGIFI 285
KI S G H+ V+E+G V+ G S G+ G + + K P++++ ++G +
Sbjct: 543 KIVHFSVGHDGSHALLVAEDGSVFFTGSASKGEDGESAKSRRQSKPYKPKKIIKMEGKIV 602
Query: 286 KDVACGGVHSCALTSKGALYAWG 308
AC S ++ G LY +G
Sbjct: 603 VCTACNNGSSSVISKDGELYMFG 625
Score = 91 (37.1 bits), Expect = 0.00025, Sum P(3) = 0.00025
Identities = 31/120 (25%), Positives = 50/120 (41%)
Query: 197 GQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGS 256
G +G E + R K Y E + + +C S+ +S++GE+Y +G +
Sbjct: 569 GSASKGEDGESAKSRRQSKPYKPKKIIKMEGKIVVCTACNNGSSSVISKDGELYMFGKDA 628
Query: 257 VGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLG 316
+ D L V L G F+ VA G H+C L G ++ +G + GQ G
Sbjct: 629 I---------YSDSSSL---VSDLKGHFVTQVAMGKAHTCVLMKNGEVWTFGVNNKGQCG 676
Score = 49 (22.3 bits), Expect = 1.9e-11, Sum P(4) = 1.9e-11
Identities = 15/46 (32%), Positives = 26/46 (56%)
Query: 411 LADACSLKELCEFRLAESVTLSNASEI-EDVASRTGSE--ALARLC 453
LAD+ ++K + EFR +++SE SR+G+E A+ +C
Sbjct: 4366 LADSKTMKAMVEFREHTGKPTTSSSEACRFCGSRSGTELSAVGSVC 4411
Score = 40 (19.1 bits), Expect = 1.9e-11, Sum P(4) = 1.9e-11
Identities = 7/20 (35%), Positives = 11/20 (55%)
Query: 396 GEVRKLAAGGGHSAVLADAC 415
GE+ +LA GG + + C
Sbjct: 3262 GEMAQLAVGGPEKDTICELC 3281
Score = 40 (19.1 bits), Expect = 3.7e-11, Sum P(3) = 3.7e-11
Identities = 12/36 (33%), Positives = 15/36 (41%)
Query: 393 WCVGEVRKLAAGGGHSAVLADACSLKELCEFRLAES 428
W GE K+A S +C + L FRL S
Sbjct: 3909 WKDGESTKIAGQISASVAQQRSCEAETLRVFRLITS 3944
Score = 39 (18.8 bits), Expect = 8.1e-05, Sum P(4) = 8.1e-05
Identities = 6/14 (42%), Positives = 10/14 (71%)
Query: 23 IYVWGYNHSGQTGR 36
++ +G N+ GQ GR
Sbjct: 664 VWTFGVNNKGQCGR 677
>DICTYBASE|DDB_G0280093 [details] [associations]
symbol:gacGG "RhoGAP domain-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0007165 "signal
transduction" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0043547 "positive regulation of GTPase activity"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005096
"GTPase activator activity" evidence=IEA] InterPro:IPR000198
InterPro:IPR008936 Pfam:PF00620 PROSITE:PS50238 SMART:SM00324
dictyBase:DDB_G0280093 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005737 GO:GO:0007165 GO:GO:0005096 GO:GO:0043547
Gene3D:1.10.555.10 SUPFAM:SSF48350 GenomeReviews:CM000152_GR
EMBL:AAFI02000035 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
eggNOG:COG5184 HSSP:Q07960 RefSeq:XP_641238.1
ProteinModelPortal:Q54VW7 EnsemblProtists:DDB0233849 GeneID:8622369
KEGG:ddi:DDB_G0280093 InParanoid:Q54VW7 OMA:INSIVEC Uniprot:Q54VW7
Length = 1203
Score = 177 (67.4 bits), Expect = 5.4e-11, Sum P(2) = 5.4e-11
Identities = 75/252 (29%), Positives = 108/252 (42%)
Query: 70 GHEHTAAVASDGTLFTWGANEFGQLGDGTE-EGRKHPEKVKQLQSEFVKSISCGAHCTAA 128
G+ H+ A+ G L+ WG N QL P K++ + ++ VKSISCG + +AA
Sbjct: 42 GYNHSLALTETGELYGWGDNRHHQLSSNKAITSIDKPIKIQVIPNQRVKSISCGGNFSAA 101
Query: 129 IAEPRENDGTISTSRLWVWGQN-QGSNFPRLFWGAFTPNTIICQVSCGSVH--VVALS-- 183
I E +G L+VWG +G + C VS G H VVA S
Sbjct: 102 IME----NGL-----LYVWGTLIEGGKCTESPTKVDLLKGVTC-VSIGINHCAVVADSPT 151
Query: 184 --ECGLLQAWGYNEYGQLGRGITCEGL-QGPR-VIKGYAKFLDEAPELEKITQVSCGEYH 239
E + WG N GQLG + + + PR V G K V CGE
Sbjct: 152 TPEKRSVYTWGTNRKGQLG--VVGDSITNAPRRVTLG-----------SKAISVCCGEEF 198
Query: 240 SAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALT 299
+AA+ E EV+ WG Q+ CS S + +P V G I +++C + A +
Sbjct: 199 TAAIVEGNEVFVWGYNKSRQI--CSNNSDEIISIP--VKPFLGRDIVELSCTKNYIAARS 254
Query: 300 SKGALYAWGGSQ 311
G + WG ++
Sbjct: 255 GVGNVCVWGSNE 266
Score = 165 (63.1 bits), Expect = 1.1e-09, Sum P(2) = 1.1e-09
Identities = 56/181 (30%), Positives = 86/181 (47%)
Query: 144 LWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGI 203
L+ WG ++ S P + PN IC + G H +AL+E G L WG N + QL
Sbjct: 16 LYCWG-DKFSGKPT--FNPLIPN--ICFMDNGYNHSLALTETGELYGWGDNRHHQLSSNK 70
Query: 204 TCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHC 263
+ P IK + P +++ +SCG SAA+ ENG +Y WG G G C
Sbjct: 71 AITSIDKP--IK-----IQVIPN-QRVKSISCGGNFSAAIMENGLLYVWGTLIEG--GKC 120
Query: 264 SLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTS-------KGALYAWGGSQAGQLG 316
+ +S P +V L G+ + G++ CA+ + K ++Y WG ++ GQLG
Sbjct: 121 T-ES------PTKVDLLKGVTCVSI---GINHCAVVADSPTTPEKRSVYTWGTNRKGQLG 170
Query: 317 L 317
+
Sbjct: 171 V 171
Score = 163 (62.4 bits), Expect = 3.0e-08, P = 3.0e-08
Identities = 61/242 (25%), Positives = 95/242 (39%)
Query: 18 PAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAV 77
P K ++Y WG N GQ G G + P+++ S+ + + CG E TAA+
Sbjct: 153 PEKRSVYTWGTNRKGQLGVVG-DSITNAPRRVT---------LGSKAISVCCGEEFTAAI 202
Query: 78 ASDGTLFTWGANEFGQL-GDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND 136
+F WG N+ Q+ + ++E P VK + +SC + AA R
Sbjct: 203 VEGNEVFVWGYNKSRQICSNNSDEIISIP--VKPFLGRDIVELSCTKNYIAA----RSGV 256
Query: 137 GTISTSRLWVWGQNQGSNFPRLFWGAFT--PNTIICQVSCGSVHVVALSECGLLQAWGYN 194
G + VWG N+ R+ F PN I Q+S + H++ LSE G + +WG +
Sbjct: 257 GNVC-----VWGSNE--QVCRIGDDKFINFPNKIK-QISASTSHILVLSEKGEIFSWGNS 308
Query: 195 EYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGL 254
E QL + G K + + + VY+WG
Sbjct: 309 EDNQLSHKLDVNSSPNINSSSGTTTPTTNTTTTTKKSTLQFNNVYQLEGRNVLSVYSWGK 368
Query: 255 GS 256
S
Sbjct: 369 SS 370
Score = 129 (50.5 bits), Expect = 3.0e-08, Sum P(2) = 3.0e-08
Identities = 74/249 (29%), Positives = 103/249 (41%)
Query: 27 GYNHS---GQTGR-----KGRERQLRIPKQL-----PPELFGCPAGANSRWLDIACGHEH 73
GYNHS +TG R QL K + P ++ P N R I+CG
Sbjct: 42 GYNHSLALTETGELYGWGDNRHHQLSSNKAITSIDKPIKIQVIP---NQRVKSISCGGNF 98
Query: 74 TAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGA-HCTAAIAE- 131
+AA+ +G L+ WG G G TE P KV L+ V +S G HC A +A+
Sbjct: 99 SAAIMENGLLYVWGTLIEG--GKCTES----PTKVDLLKG--VTCVSIGINHC-AVVADS 149
Query: 132 ---PREND----GTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSE 184
P + GT +L V G + +N PR T + V CG A+ E
Sbjct: 150 PTTPEKRSVYTWGTNRKGQLGVVGDSI-TNAPR----RVTLGSKAISVCCGEEFTAAIVE 204
Query: 185 CGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVS 244
+ WGYN+ Q+ + E + P +K FL I ++SC + + AA S
Sbjct: 205 GNEVFVWGYNKSRQICSNNSDEIISIP--VK---PFLGR-----DIVELSCTKNYIAARS 254
Query: 245 ENGEVYTWG 253
G V WG
Sbjct: 255 GVGNVCVWG 263
Score = 84 (34.6 bits), Expect = 3.0e-08, Sum P(2) = 3.0e-08
Identities = 39/150 (26%), Positives = 63/150 (42%)
Query: 230 ITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELL--PRRVVALDGIFIKD 287
I ++SC + + AA S G V WG S Q+ C + GD + + P + IK
Sbjct: 240 IVELSCTKNYIAARSGVGNVCVWG--SNEQV--CRI--GDDKFINFPNK--------IKQ 285
Query: 288 VACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGV 347
++ H L+ KG +++WG S+ QL S I + S T P
Sbjct: 286 ISASTSHILVLSEKGEIFSWGNSEDNQLSHKLDVNSSPNINSSSGT---TTPTTNTTTTT 342
Query: 348 QLVACGHSHTLVYMRDGR----IHGWGYNS 373
+ ++ VY +GR ++ WG +S
Sbjct: 343 KKSTLQFNN--VYQLEGRNVLSVYSWGKSS 370
Score = 60 (26.2 bits), Expect = 5.4e-11, Sum P(2) = 5.4e-11
Identities = 11/37 (29%), Positives = 19/37 (51%)
Query: 344 PNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANE 380
PN ++ ++ SH LV G I WG + Q +++
Sbjct: 280 PNKIKQISASTSHILVLSEKGEIFSWGNSEDNQLSHK 316
>UNIPROTKB|F1MD33 [details] [associations]
symbol:F1MD33 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0042462 "eye photoreceptor cell development"
evidence=IEA] [GO:0007601 "visual perception" evidence=IEA]
[GO:0005929 "cilium" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] INTERPRO:IPR000408 Pfam:PF00415 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 GeneTree:ENSGT00700000104160 EMBL:DAAA02073693
IPI:IPI00698306 Ensembl:ENSBTAT00000005090 OMA:SAEKHET
Uniprot:F1MD33
Length = 158
Score = 157 (60.3 bits), Expect = 1.3e-10, P = 1.3e-10
Identities = 61/173 (35%), Positives = 81/173 (46%)
Query: 186 GLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSE 245
G + A G N GQLG G T E R F KI Q+S G SAA++
Sbjct: 3 GQVYATGGNNEGQLGLGDTDE-----RSAFHLISFFTSQ---HKIKQLSAGSNTSAALTA 54
Query: 246 NGEVYTWGLGSVGQLG-HCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGAL 304
GE+YT+G G+LG L K +P+ V + I+ VACGG H+ LT K A+
Sbjct: 55 EGELYTFGEPESGKLGLPPKLLVNHK--VPQLVPGISEKVIQ-VACGGGHTVVLTEK-AV 110
Query: 305 YAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHT 357
Y +G Q GQLGLG +F+ +E + V + V CG +HT
Sbjct: 111 YTFGLGQFGQLGLG----TFTFETSEP-----KVIESVKDKKISHVCCGENHT 154
Score = 135 (52.6 bits), Expect = 3.2e-08, P = 3.2e-08
Identities = 47/174 (27%), Positives = 79/174 (45%)
Query: 81 GTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEF-VKSISCGAHCTAAIAEPRENDGTI 139
G ++ G N GQLG G + R + S+ +K +S G++ +AA+ E
Sbjct: 3 GQVYATGGNNEGQLGLGDTDERSAFHLISFFTSQHKIKQLSAGSNTSAALTAEGE----- 57
Query: 140 STSRLWVWGQNQGSNF---PRLFWGAFTPNTI------ICQVSCGSVHVVALSECGLLQA 190
L+ +G+ + P+L P + + QV+CG H V L+E +
Sbjct: 58 ----LYTFGEPESGKLGLPPKLLVNHKVPQLVPGISEKVIQVACGGGHTVVLTEKAVY-T 112
Query: 191 WGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVS 244
+G ++GQLG G P+VI E+ + +KI+ V CGE H+A ++
Sbjct: 113 FGLGQFGQLGLGTFTFETSEPKVI--------ESVKDKKISHVCCGENHTALIT 158
Score = 132 (51.5 bits), Expect = 6.8e-08, P = 6.8e-08
Identities = 45/138 (32%), Positives = 67/138 (48%)
Query: 163 FTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLD 222
FT I Q+S GS AL+ G L +G E G+LG P+++ + K
Sbjct: 33 FTSQHKIKQLSAGSNTSAALTAEGELYTFGEPESGKLGLP--------PKLLVNH-KVPQ 83
Query: 223 EAPEL-EKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALD 281
P + EK+ QV+CG H+ ++E VYT+GLG GQLG + E P+ + ++
Sbjct: 84 LVPGISEKVIQVACGGGHTVVLTEKA-VYTFGLGQFGQLGLGTFTFETSE--PKVIESVK 140
Query: 282 GIFIKDVACGGVHSCALT 299
I V CG H+ +T
Sbjct: 141 DKKISHVCCGENHTALIT 158
Score = 126 (49.4 bits), Expect = 3.0e-07, P = 3.0e-07
Identities = 51/174 (29%), Positives = 80/174 (45%)
Query: 247 GEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIF-----IKDVACGGVHSCALTSK 301
G+VY G + GQLG GD + R L F IK ++ G S ALT++
Sbjct: 3 GQVYATGGNNEGQLG-----LGDTD--ERSAFHLISFFTSQHKIKQLSAGSNTSAALTAE 55
Query: 302 GALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILV--VPNGVQLVACGHSHTLV 359
G LY +G ++G+LGL P+ L+ N +P LV + V VACG HT+V
Sbjct: 56 GELYTFGEPESGKLGLPPK-----LLVNHK------VPQLVPGISEKVIQVACGGGHTVV 104
Query: 360 YMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE--VRKLAAGGGHSAVL 411
+ + ++ +G +GQ T+ V V + + + G H+A++
Sbjct: 105 -LTEKAVYTFGLGQFGQLGLGTFTFETSEPKVIESVKDKKISHVCCGENHTALI 157
Score = 117 (46.2 bits), Expect = 2.8e-06, P = 2.8e-06
Identities = 32/114 (28%), Positives = 61/114 (53%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
+ A+ +Y +G SG+ G + L + ++P +L P G + + + +ACG HT
Sbjct: 52 LTAEGELYTFGEPESGKLGLPPK---LLVNHKVP-QLV--P-GISEKVIQVACGGGHTV- 103
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGR-KHPEKVKQLQSEFVKSISCGAHCTAAI 129
V ++ ++T+G +FGQLG GT P+ ++ ++ + + + CG + TA I
Sbjct: 104 VLTEKAVYTFGLGQFGQLGLGTFTFETSEPKVIESVKDKKISHVCCGENHTALI 157
>FB|FBgn0031769 [details] [associations]
symbol:CG9135 species:7227 "Drosophila melanogaster"
[GO:0005085 "guanyl-nucleotide exchange factor activity"
evidence=ISS] [GO:0008150 "biological_process" evidence=ND]
[GO:0005875 "microtubule associated complex" evidence=IDA]
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005875 EMBL:AE014134
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 eggNOG:COG5184
GeneTree:ENSGT00700000104160 OMA:FGENKLG EMBL:AY058682
EMBL:AM294309 EMBL:AM294310 EMBL:AM294311 EMBL:AM294312
EMBL:AM294313 EMBL:AM294314 EMBL:AM294315 EMBL:AM294316
EMBL:AM294317 EMBL:AM294318 EMBL:FM245376 EMBL:FM245377
EMBL:FM245378 EMBL:FM245379 EMBL:FM245380 EMBL:FM245381
EMBL:FM245382 EMBL:FM245383 EMBL:FM245384 EMBL:FM245385
EMBL:FM245386 EMBL:FM245387 RefSeq:NP_608985.1 RefSeq:NP_723150.1
UniGene:Dm.4234 HSSP:P18754 SMR:Q9VMI5 IntAct:Q9VMI5
MINT:MINT-744911 STRING:Q9VMI5 EnsemblMetazoa:FBtr0079185
EnsemblMetazoa:FBtr0079186 GeneID:33850 KEGG:dme:Dmel_CG9135
UCSC:CG9135-RA FlyBase:FBgn0031769 InParanoid:Q9VMI5
OrthoDB:EOG4QV9T7 ChiTaRS:CG9135 GenomeRNAi:33850 NextBio:785598
Uniprot:Q9VMI5
Length = 487
Score = 179 (68.1 bits), Expect = 1.4e-10, P = 1.4e-10
Identities = 83/353 (23%), Positives = 141/353 (39%)
Query: 34 TGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHE--HTAAVASDGTLFTWGANEF 91
TG++ R+ ++ P L+ ++ +A G HT + D +G N
Sbjct: 90 TGKRDRKNVTKVR----PNLYSFHRFTEEKYRYVASGPSAAHTILINMDRKALGFGRNPS 145
Query: 92 GQLGDGTE-EGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTSRLWVWGQN 150
GQLG + + + P + L+ + + G H T + + GT+ + G+N
Sbjct: 146 GQLGLSQDIKLAEKPTIIPALEQLNIVQAAVGRHHTLFLTDT----GTV-----YACGEN 196
Query: 151 QGSN--FPRLFWGAFTPNTI------ICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRG 202
+ ++P I I ++ CG+ V L G L +G EYGQLG
Sbjct: 197 KSGQCGVGNTHANIYSPTPINYRGPPIIRIGCGAEFSVILDIKGSLHTFGLPEYGQLGHN 256
Query: 203 ------ITCEGLQ-----GPRVIKGYAKFLDEA---P-ELEKITQVSCGEYHSAAVSENG 247
+ L P+ + Y + E P + +I +CG H+ A+
Sbjct: 257 TDAKYFVNANKLSFHFETSPKKVVLYIEKSKEGHVTPVDGVQIVDFACGNNHTVAIDSKK 316
Query: 248 EVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALD--GIFIKDVACGGVHSCALTSKGALY 305
VY+WG G G+LGH + E++PR + D G + V CG S + G L+
Sbjct: 317 RVYSWGFGGFGRLGHAEPKD---EMVPRLMKFFDTQGRGGRSVFCGSTFSLIVNELGLLF 373
Query: 306 AWG-GSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHT 357
+G + G+ + P+ N +D N I++ + L+A G S T
Sbjct: 374 LFGQNKKTGEANMYPKPVQDLSGWNITDIGCANTSIMISADDT-LIAWGASPT 425
Score = 154 (59.3 bits), Expect = 7.9e-08, P = 7.9e-08
Identities = 90/357 (25%), Positives = 148/357 (41%)
Query: 26 WGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGTLFT 85
+G N SGQ G + +++ ++ P + PA + A G HT + GT++
Sbjct: 140 FGRNPSGQLGLS---QDIKLAEK--PTII--PALEQLNIVQAAVGRHHTLFLTDTGTVYA 192
Query: 86 WGANEFGQLGDGTEEGRKH-PEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTSRL 144
G N+ GQ G G + P + ++ I CGA + + + G++ T L
Sbjct: 193 CGENKSGQCGVGNTHANIYSPTPINYRGPPIIR-IGCGAEFSVIL----DIKGSLHTFGL 247
Query: 145 WVWGQNQGSNFPRLFWGA------F--TPNTIICQVSCGSV-HVVALSECGLLQ-AWGYN 194
+GQ + + F A F +P ++ + HV + ++ A G N
Sbjct: 248 PEYGQLGHNTDAKYFVNANKLSFHFETSPKKVVLYIEKSKEGHVTPVDGVQIVDFACGNN 307
Query: 195 EYGQLG--RGITCEGLQGPRVIKGYAKFLDE-APELEKI--TQ------VSCGEYHSAAV 243
+ + + G G + G+A+ DE P L K TQ V CG S V
Sbjct: 308 HTVAIDSKKRVYSWGFGGFGRL-GHAEPKDEMVPRLMKFFDTQGRGGRSVFCGSTFSLIV 366
Query: 244 SENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGA 303
+E G ++ +G ++G+ + P+ V L G I D+ C S +++
Sbjct: 367 NELGLLFLFGQNK---------KTGEANMYPKPVQDLSGWNITDIGCANT-SIMISADDT 416
Query: 304 LYAWGGSQA-GQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLV 359
L AWG S G+LG+G +S S +P E NI I P V G+SHT++
Sbjct: 417 LIAWGASPTFGELGIGEFQKS-STVPKEVPK-LDNIKI---PQ----VTMGYSHTVL 464
Score = 130 (50.8 bits), Expect = 3.4e-05, P = 3.4e-05
Identities = 64/240 (26%), Positives = 99/240 (41%)
Query: 169 ICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVI--KGYAKF-LDEAP 225
I Q + G H + L++ G + A G N+ GQ G G T + P I +G +
Sbjct: 171 IVQAAVGRHHTLFLTDTGTVYACGENKSGQCGVGNTHANIYSPTPINYRGPPIIRIGCGA 230
Query: 226 ELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQ-LGHCSLQSGDKELLPRRVVA----- 279
E I + G H+ + E G++ G + + + + S E P++VV
Sbjct: 231 EFSVILDIK-GSLHTFGLPEYGQL---GHNTDAKYFVNANKLSFHFETSPKKVVLYIEKS 286
Query: 280 -------LDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLG-PQTRSFSLIPNES 331
+DG+ I D ACG H+ A+ SK +Y+WG G+LG P+ +
Sbjct: 287 KEGHVTPVDGVQIVDFACGNNHTVAIDSKKRVYSWGFGGFGRLGHAEPKDEMVPRLMKFF 346
Query: 332 DTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPV 391
DT R G + V CG + +L+ G + +G N AN YP PV
Sbjct: 347 DTQGR---------GGRSVFCGSTFSLIVNELGLLFLFGQNKKTGEAN------MYPKPV 391
Score = 117 (46.2 bits), Expect = 0.00092, P = 0.00092
Identities = 43/161 (26%), Positives = 73/161 (45%)
Query: 228 EKITQVSCGEY--HSAAVSENGEVYTWGLGSVGQLGHCS-LQSGDKELLPRRVVALDGIF 284
EK V+ G H+ ++ + + +G GQLG ++ +K P + AL+ +
Sbjct: 114 EKYRYVASGPSAAHTILINMDRKALGFGRNPSGQLGLSQDIKLAEK---PTIIPALEQLN 170
Query: 285 IKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVP 344
I A G H+ LT G +YA G +++GQ G+G T + P + +R PI+
Sbjct: 171 IVQAAVGRHHTLFLTDTGTVYACGENKSGQCGVG-NTHANIYSPTPIN--YRGPPII--- 224
Query: 345 NGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAA-NEKSTY 384
+ CG +++ G +H +G YGQ N + Y
Sbjct: 225 ----RIGCGAEFSVILDIKGSLHTFGLPEYGQLGHNTDAKY 261
>UNIPROTKB|F1NXV1 [details] [associations]
symbol:IBTK "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005634 "nucleus" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0019901 "protein kinase binding" evidence=IEA]
[GO:0030292 "protein tyrosine kinase inhibitor activity"
evidence=IEA] [GO:0051209 "release of sequestered calcium ion into
cytosol" evidence=IEA] InterPro:IPR002110 InterPro:IPR000210
InterPro:IPR013069 Pfam:PF00651 PROSITE:PS50088 PROSITE:PS50097
SMART:SM00225 SMART:SM00248 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005634 GO:GO:0005737 GO:GO:0051209 Gene3D:1.25.40.20
InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403 PROSITE:PS50297
Gene3D:3.30.710.10 InterPro:IPR011333 SUPFAM:SSF54695
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS50012 GO:GO:0030292 OMA:VSALHHK
GeneTree:ENSGT00700000104160 EMBL:AADN02002424 EMBL:AADN02002425
IPI:IPI00590269 Ensembl:ENSGALT00000025575 Uniprot:F1NXV1
Length = 1359
Score = 158 (60.7 bits), Expect = 1.5e-10, Sum P(2) = 1.5e-10
Identities = 60/204 (29%), Positives = 95/204 (46%)
Query: 177 VHVV-ALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEK-ITQVS 234
+HVV ++ + WG N LG G G Q K + + +D P I QV
Sbjct: 135 IHVVFKKTDLTEVYTWGNNINFTLGHG----GQQS----KHHPELVDLFPRNSVYIKQVV 186
Query: 235 CGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKE--LLPRRVVALDGIFIKDVACGG 292
++HS +S G++YT G G G+LGH GD++ L+PR V L +A
Sbjct: 187 LCKFHSVFLSHKGQIYTCGHGQGGRLGH-----GDEQTCLVPRLVEGLSSHQCSQIAAAK 241
Query: 293 VHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVAC 352
H+ LT G +Y +G + QLG+ P + S +P + +N+ +V VA
Sbjct: 242 DHTVVLTEDGCVYTFGLNTFHQLGILPPPANCS-VPRQVQA--KNLKGRMVIG----VAA 294
Query: 353 GHSHTLVYMRDGRIHGWGYNSYGQ 376
G HT+++ ++ ++ G N GQ
Sbjct: 295 GRFHTVLWTKEA-VYTMGLNG-GQ 316
Score = 97 (39.2 bits), Expect = 0.00053, Sum P(2) = 0.00053
Identities = 60/253 (23%), Positives = 103/253 (40%)
Query: 12 RPVDNIPAKS---AIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLD-- 66
RP+ + K+ +Y WG N + G G++ + P+ + +LF P NS ++
Sbjct: 133 RPIHVVFKKTDLTEVYTWGNNINFTLGHGGQQSKHH-PELV--DLF--PR--NSVYIKQV 185
Query: 67 IACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCT 126
+ C H+ ++ G ++T G + G+LG G E+ P V+ L S I+ T
Sbjct: 186 VLCKF-HSVFLSHKGQIYTCGHGQGGRLGHGDEQTCLVPRLVEGLSSHQCSQIAAAKDHT 244
Query: 127 AAIAEPRENDGTISTSRLWVWGQ------NQGSNFPRLFWGAFTPNTIICQVSCGSVHVV 180
+ E DG + T L + Q + PR ++ V+ G H V
Sbjct: 245 VVLTE----DGCVYTFGLNTFHQLGILPPPANCSVPRQVQAKNLKGRMVIGVAAGRFHTV 300
Query: 181 ALSECGLLQAWGYNEYGQLGRGITCEG---LQGPRVIKGYAKFLDEAPELEKITQVSCGE 237
++ + G N GQLG + G + PR + D + L VS +
Sbjct: 301 LWTK-EAVYTMGLNG-GQLGYLLDPNGEKCVTAPRQVSAL-HHKDVSVSL-----VSASD 352
Query: 238 YHSAAVSENGEVY 250
+ V+E G++Y
Sbjct: 353 GATVCVTERGDIY 365
Score = 77 (32.2 bits), Expect = 1.5e-10, Sum P(2) = 1.5e-10
Identities = 15/37 (40%), Positives = 24/37 (64%)
Query: 417 LKELCEFRLAESVTLSNASEIEDVASRTGSEALARLC 453
LKE+CE +AE +TL NA+E+ + ++ +E L C
Sbjct: 860 LKEICEVAIAEKLTLKNAAELLEFSAMYNAEQLKLSC 896
>WB|WBGene00021461 [details] [associations]
symbol:nekl-1 species:6239 "Caenorhabditis elegans"
[GO:0004672 "protein kinase activity" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0006468 "protein phosphorylation"
evidence=IEA] [GO:0004674 "protein serine/threonine kinase
activity" evidence=IEA] [GO:0004713 "protein tyrosine kinase
activity" evidence=IEA] InterPro:IPR000719 InterPro:IPR002290
InterPro:IPR008271 InterPro:IPR011009 InterPro:IPR017441
Pfam:PF00069 PROSITE:PS00107 PROSITE:PS00108 PROSITE:PS50011
SMART:SM00220 INTERPRO:IPR000408 GO:GO:0005524 eggNOG:COG0515
SUPFAM:SSF56112 GO:GO:0004674 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS50012 EMBL:FO081209
KO:K08857 GeneTree:ENSGT00700000104137 RefSeq:NP_490968.2
ProteinModelPortal:Q6AW07 SMR:Q6AW07 EnsemblMetazoa:Y39G10AR.3
GeneID:189769 KEGG:cel:CELE_Y39G10AR.3 UCSC:Y39G10AR.3 CTD:189769
WormBase:Y39G10AR.3 HOGENOM:HOG000017263 InParanoid:Q6AW07
OMA:RNDNTEL NextBio:943564 Uniprot:Q6AW07
Length = 998
Score = 183 (69.5 bits), Expect = 1.5e-10, P = 1.5e-10
Identities = 79/322 (24%), Positives = 129/322 (40%)
Query: 67 IACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCT 126
+A HT + +D LF +G N GQLG G ++ V+ L+ ++S+ G + +
Sbjct: 472 VALSKTHTMVLTNDNELFGFGDNSCGQLGFGKFSKMENGRLVESLKGRDIQSVGVGNYFS 531
Query: 127 AAIAEPRENDGTISTSRLWVWGQN-QGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSEC 185
+ R T T++ G++ + S P L N I + CG HVVA+ E
Sbjct: 532 VICCD-RGTLLTFGTAKNLGLGKDAKDSAKPMLLEQLLREN--IKDIYCGHDHVVAVLES 588
Query: 186 GLLQAWGYNEYGQLGRGITCEGLQGPRVI-------KGYAKFLDEAPELEKITQVSCGEY 238
G WG N+YGQLG T E P + Y F P +KI G+
Sbjct: 589 GECLGWGSNQYGQLGLP-TLEHFFAPTKVFFLNEATALYGPFQIPMPSNKKIVYGKAGKD 647
Query: 239 HSAAVSENGEVYTWG------LGSVGQLGHCSLQSGDKELLPRRVVALDGI--FIKDVAC 290
+ +S++G + G L ++G + + + L G + D +
Sbjct: 648 ATMLLSDDGSLIAMGSNKHNKLNLTQRVGFFTKEKKTPNDYVNKPTILQGFPERVVDFSV 707
Query: 291 GGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNI-PIL-VVPNGVQ 348
G HS + G + +G + +LGLG N R + P+ ++ +
Sbjct: 708 GSYHSGVILESGQVMIFGRNDNTELGLG----------NSQKMAVRCVKPVKSLLHHACT 757
Query: 349 LVACGHSHTLVYMRDGRIHGWG 370
V CG TLV + ++ WG
Sbjct: 758 HVLCGDGFTLVSTTEQELYFWG 779
Score = 145 (56.1 bits), Expect = 2.1e-06, P = 2.1e-06
Identities = 45/171 (26%), Positives = 71/171 (41%)
Query: 221 LDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVAL 280
+ + P I QV+ + H+ ++ + E++ +G S GQLG + R V +L
Sbjct: 460 IPDLPSRISIKQVALSKTHTMVLTNDNELFGFGDNSCGQLGFGKFSKMENG---RLVESL 516
Query: 281 DGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPI 340
G I+ V G S +G L +G A LGLG + S P + R
Sbjct: 517 KGRDIQSVGVGNYFSVICCDRGTLLTFG--TAKNLGLGKDAKD-SAKPMLLEQLLRE--- 570
Query: 341 LVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPV 391
++ + CGH H + + G GWG N YGQ + + P+ V
Sbjct: 571 -----NIKDIYCGHDHVVAVLESGECLGWGSNQYGQLGLPTLEHFFAPTKV 616
Score = 145 (56.1 bits), Expect = 2.1e-06, P = 2.1e-06
Identities = 59/219 (26%), Positives = 94/219 (42%)
Query: 165 PNTI-ICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDE 223
P+ I I QV+ H + L+ L +G N GQLG G + ++ R+++ K D
Sbjct: 464 PSRISIKQVALSKTHTMVLTNDNELFGFGDNSCGQLGFGKFSK-MENGRLVESL-KGRD- 520
Query: 224 APELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGI 283
I V G Y S + G + T+G LG + S K +L +++ +
Sbjct: 521 ------IQSVGVGNYFSVICCDRGTLLTFGTAKNLGLGKDAKDSA-KPMLLEQLLREN-- 571
Query: 284 FIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFS----LIPNESDTYFRNIP 339
IKD+ CG H A+ G WG +Q GQLGL F+ NE+ +
Sbjct: 572 -IKDIYCGHDHVVAVLESGECLGWGSNQYGQLGLPTLEHFFAPTKVFFLNEATALYGPFQ 630
Query: 340 ILVVPNGVQLV--ACGHSHTLVYMRDGRIHGWGYNSYGQ 376
I +P+ ++V G T++ DG + G N + +
Sbjct: 631 I-PMPSNKKIVYGKAGKDATMLLSDDGSLIAMGSNKHNK 668
>DICTYBASE|DDB_G0282381 [details] [associations]
symbol:gefC "Ras nucleotide exchange factor"
species:44689 "Dictyostelium discoideum" [GO:0051056 "regulation of
small GTPase mediated signal transduction" evidence=IEA]
[GO:0035023 "regulation of Rho protein signal transduction"
evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0005089 "Rho guanyl-nucleotide exchange factor
activity" evidence=IEA] [GO:0005085 "guanyl-nucleotide exchange
factor activity" evidence=IEA] InterPro:IPR000219
InterPro:IPR000651 InterPro:IPR001895 InterPro:IPR008937
InterPro:IPR019804 Pfam:PF00617 Pfam:PF00618 Pfam:PF00621
PROSITE:PS00720 PROSITE:PS00741 PROSITE:PS50009 PROSITE:PS50010
PROSITE:PS50212 SMART:SM00147 SMART:SM00229 dictyBase:DDB_G0282381
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0007264 EMBL:AAFI02000047
GenomeReviews:CM000152_GR GO:GO:0005622 GO:GO:0005089
Gene3D:1.20.900.10 SUPFAM:SSF48065 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0035023 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 eggNOG:COG5184
Gene3D:1.10.840.10 InterPro:IPR023578 SUPFAM:SSF48366
PANTHER:PTHR23113 HSSP:Q07889 EMBL:AY160092 RefSeq:XP_640241.1
ProteinModelPortal:Q8IS20 STRING:Q8IS20 EnsemblProtists:DDB0215004
GeneID:8623780 KEGG:ddi:DDB_G0282381 InParanoid:Q8IS20 OMA:SIATIRG
Uniprot:Q8IS20
Length = 1457
Score = 173 (66.0 bits), Expect = 1.8e-10, Sum P(2) = 1.8e-10
Identities = 50/173 (28%), Positives = 82/173 (47%)
Query: 164 TPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYA----- 218
+P I QV+ G+ H+V L+E G + WG N GQLG + + Q ++ + +
Sbjct: 330 SPLNTIKQVALGNYHIVLLTEGGNVWTWGSNSNGQLGYLVDTQQQQQQQLQQQQSMSSLQ 389
Query: 219 -KFLDEAPE---LE-----KITQVSCGEY------HSAAVSENGEVYTWGLGSVGQLGHC 263
+P L+ K+ ++ C +Y ++AA++E GE+Y WG+ G+LG
Sbjct: 390 PSASSSSPSSSSLQTTCTPKMVEIKCVKYIATGVKNTAALTEWGELYMWGINEHGELG-- 447
Query: 264 SLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGS-QAGQL 315
L P RV+ L + +AC HS T G +Y WG S + G++
Sbjct: 448 -LGDTIDRRTPTRVIRLKNEVVSTIACSSTHSACYTESGKMYVWGQSDETGKI 499
Score = 144 (55.7 bits), Expect = 1.7e-09, Sum P(2) = 1.7e-09
Identities = 44/147 (29%), Positives = 69/147 (46%)
Query: 172 VSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKIT 231
++ G + AL+E G L WG NE+G+LG G T + RVI+ L E ++
Sbjct: 419 IATGVKNTAALTEWGELYMWGINEHGELGLGDTIDRRTPTRVIR-----LKN----EVVS 469
Query: 232 QVSCGEYHSAAVSENGEVYTWGLGS-VGQL----GHCSLQSG-DKELLPRRVVALDGIF- 284
++C HSA +E+G++Y WG G++ + S D+E+ + G F
Sbjct: 470 TIACSSTHSACYTESGKMYVWGQSDETGKIQAIPSPLPIHSYLDREIKSPNGGGVGGFFG 529
Query: 285 ----IKDVACGGVHSCALTSKGALYAW 307
IK +ACG LT G ++ W
Sbjct: 530 GGGKIKQLACGQRCIAVLTQMGEVFMW 556
Score = 133 (51.9 bits), Expect = 0.00033, Sum P(2) = 0.00033
Identities = 56/238 (23%), Positives = 99/238 (41%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+Y+WG N G+ G I ++ P + N IAC H+A G
Sbjct: 435 LYMWGINEHGELGLGDT-----IDRRTPTRVIRLK---NEVVSTIACSSTHSACYTESGK 486
Query: 83 LFTWG-ANEFGQLGDGTEEGRKHPEKVKQLQSE-------F------VKSISCGAHCTAA 128
++ WG ++E G++ H ++++S F +K ++CG C A
Sbjct: 487 MYVWGQSDETGKIQAIPSPLPIHSYLDREIKSPNGGGVGGFFGGGGKIKQLACGQRCIAV 546
Query: 129 IAEPRENDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLL 188
+ + E +++W + G P A N + + G+ H+V L++ G +
Sbjct: 547 LTQMGE---------VFMW-EIPGIPIP--LRNALE-NHSVRNIVMGNFHLVCLTDSGEV 593
Query: 189 QAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSEN 246
G N+ GQLGR + P ++K + D E + ++ GE+HS A+ EN
Sbjct: 594 VTIGRNKTGQLGR---TDAENEPGIVKQLSFDPDGLNSDEFVVSIAAGEFHSVALVEN 648
Score = 131 (51.2 bits), Expect = 2.4e-08, Sum P(3) = 2.4e-08
Identities = 30/84 (35%), Positives = 49/84 (58%)
Query: 67 IACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCT 126
IA G ++TAA+ G L+ WG NE G+LG G R+ P +V +L++E V +I+C + +
Sbjct: 419 IATGVKNTAALTEWGELYMWGINEHGELGLGDTIDRRTPTRVIRLKNEVVSTIACSSTHS 478
Query: 127 AAIAEPRENDGTISTSRLWVWGQN 150
A E + +++VWGQ+
Sbjct: 479 ACYTE---------SGKMYVWGQS 493
Score = 114 (45.2 bits), Expect = 1.9e-10, Sum P(3) = 1.9e-10
Identities = 41/150 (27%), Positives = 65/150 (43%)
Query: 285 IKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVV- 343
+K +A G ++ ALT G LY WG ++ G+LGLG DT R P V+
Sbjct: 416 VKYIATGVKNTAALTEWGELYMWGINEHGELGLG-------------DTIDRRTPTRVIR 462
Query: 344 -PNGV-QLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKL 401
N V +AC +H+ Y G+++ WG + + ++ + P P+ + K
Sbjct: 463 LKNEVVSTIACSSTHSACYTESGKMYVWGQSD--ETGKIQAIPS--PLPIHSYLDREIKS 518
Query: 402 AAGGGHSAVLADACSLKEL-CEFRLAESVT 430
GGG +K+L C R +T
Sbjct: 519 PNGGGVGGFFGGGGKIKQLACGQRCIAVLT 548
Score = 107 (42.7 bits), Expect = 1.9e-10, Sum P(3) = 1.9e-10
Identities = 21/43 (48%), Positives = 28/43 (65%)
Query: 220 FLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGH 262
FL+ +P L I QV+ G YH ++E G V+TWG S GQLG+
Sbjct: 326 FLENSP-LNTIKQVALGNYHIVLLTEGGNVWTWGSNSNGQLGY 367
Score = 87 (35.7 bits), Expect = 2.4e-08, Sum P(3) = 2.4e-08
Identities = 23/82 (28%), Positives = 39/82 (47%)
Query: 221 LDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVAL 280
L A E + + G +H ++++GEV T G GQLG ++ + ++ +
Sbjct: 565 LRNALENHSVRNIVMGNFHLVCLTDSGEVVTIGRNKTGQLGRTDAEN-EPGIVKQLSFDP 623
Query: 281 DGI----FIKDVACGGVHSCAL 298
DG+ F+ +A G HS AL
Sbjct: 624 DGLNSDEFVVSIAAGEFHSVAL 645
Score = 82 (33.9 bits), Expect = 1.7e-09, Sum P(2) = 1.7e-09
Identities = 15/47 (31%), Positives = 28/47 (59%)
Query: 67 IACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQS 113
+A G+ H + G ++TWG+N GQLG + ++ ++++Q QS
Sbjct: 338 VALGNYHIVLLTEGGNVWTWGSNSNGQLGYLVDTQQQQQQQLQQQQS 384
Score = 70 (29.7 bits), Expect = 4.9e-05, Sum P(2) = 4.9e-05
Identities = 17/65 (26%), Positives = 36/65 (55%)
Query: 191 WGYNEYGQLGRG-ITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEV 249
+G+ G LG G IT + P+ + + + +D+ ++ +V+CG YH+ V+++ +
Sbjct: 6 FGHGSNGALGLGKITDDTCPTPQKVNYFTE-IDK-----RVKKVACGSYHTVFVTDDEHL 59
Query: 250 YTWGL 254
Y G+
Sbjct: 60 YICGI 64
Score = 65 (27.9 bits), Expect = 1.7e-05, Sum P(3) = 1.7e-05
Identities = 26/105 (24%), Positives = 40/105 (38%)
Query: 311 QAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWG 370
Q L P S S P+ S P +V V+ +A G +T G ++ WG
Sbjct: 382 QQSMSSLQPSASSSS--PSSSSLQTTCTPKMVEIKCVKYIATGVKNTAALTEWGELYMWG 439
Query: 371 YNSYGQAANEKSTYAWYPSPVDWCVGEV-RKLAAGGGHSAVLADA 414
N +G+ + P+ V EV +A HSA ++
Sbjct: 440 INEHGELGLGDTIDRRTPTRVIRLKNEVVSTIACSSTHSACYTES 484
Score = 61 (26.5 bits), Expect = 1.8e-10, Sum P(2) = 1.8e-10
Identities = 16/54 (29%), Positives = 29/54 (53%)
Query: 82 TLFTWGANEFGQLGDG--TEEGRKHPEKVKQLQS--EFVKSISCGAHCTAAIAE 131
++FT+G G LG G T++ P+KV + VK ++CG++ T + +
Sbjct: 2 SVFTFGHGSNGALGLGKITDDTCPTPQKVNYFTEIDKRVKKVACGSYHTVFVTD 55
Score = 49 (22.3 bits), Expect = 3.1e-09, Sum P(3) = 3.1e-09
Identities = 16/66 (24%), Positives = 27/66 (40%)
Query: 22 AIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDG 81
+++ +G+ +G G G+ P P+ + R +ACG HT V D
Sbjct: 2 SVFTFGHGSNGALGL-GKITDDTCPT---PQKVNYFTEIDKRVKKVACGSYHTVFVTDDE 57
Query: 82 TLFTWG 87
L+ G
Sbjct: 58 HLYICG 63
Score = 42 (19.8 bits), Expect = 2.4e-08, Sum P(3) = 2.4e-08
Identities = 6/13 (46%), Positives = 9/13 (69%)
Query: 23 IYVWGYNHSGQTG 35
++ WG N +GQ G
Sbjct: 354 VWTWGSNSNGQLG 366
Score = 38 (18.4 bits), Expect = 3.9e-08, Sum P(3) = 3.9e-08
Identities = 6/14 (42%), Positives = 11/14 (78%)
Query: 171 QVSCGSVHVVALSE 184
+V+CGS H V +++
Sbjct: 42 KVACGSYHTVFVTD 55
>UNIPROTKB|F1MMV0 [details] [associations]
symbol:IBTK "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0051209 "release of sequestered calcium ion into
cytosol" evidence=IEA] [GO:0030292 "protein tyrosine kinase
inhibitor activity" evidence=IEA] [GO:0019901 "protein kinase
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR002110
InterPro:IPR000210 InterPro:IPR013069 Pfam:PF00651 PROSITE:PS50088
PROSITE:PS50097 SMART:SM00225 SMART:SM00248 INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005634 GO:GO:0005737 GO:GO:0051209
Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403
PROSITE:PS50297 Gene3D:3.30.710.10 InterPro:IPR011333
SUPFAM:SSF54695 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PROSITE:PS50012 GO:GO:0030292 OMA:VSALHHK
GeneTree:ENSGT00700000104160 EMBL:DAAA02025482 EMBL:DAAA02025483
IPI:IPI00708608 Ensembl:ENSBTAT00000038116 Uniprot:F1MMV0
Length = 1353
Score = 168 (64.2 bits), Expect = 2.4e-10, Sum P(3) = 2.4e-10
Identities = 73/252 (28%), Positives = 110/252 (43%)
Query: 73 HTAAVASDGT-LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSE--FVKSIS-CGAHCTAA 128
H +D T ++TWG N LG G++ + HPE V ++K + C H +
Sbjct: 133 HVVFKNTDPTDVYTWGDNTNFTLGHGSQNSKHHPELVDLFSRSGIYIKQVVLCKFH-SVF 191
Query: 129 IAEPRE--NDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECG 186
+++ + G RL G Q PRL G N QV+ H V L+E G
Sbjct: 192 LSQKGQVYTCGHGPGGRLG-HGDEQTCLVPRLVEGLSGHNC--SQVAAAKDHTVVLTEDG 248
Query: 187 LLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSEN 246
+ +G N + QLG PR ++ AK+L I V+ G +H+ +
Sbjct: 249 CVYTFGLNIFHQLGLIPPPSSCNVPRQMQ--AKYLKG----RTIIGVAAGRFHTVLWTRE 302
Query: 247 GEVYTWGLGSVGQLGHCSLQSGDKELL-PRRVVALD--GIFIKDVACGGVHSCALTSKGA 303
VYT GL GQLG+ +G+K + PR+V AL I + VA + +T+KG
Sbjct: 303 A-VYTMGLNG-GQLGYLLDPNGEKCVTAPRQVSALHHKDITLSLVAASDGATVCVTTKGD 360
Query: 304 LYAWGGSQAGQL 315
+Y Q +L
Sbjct: 361 IYLLADYQCKKL 372
Score = 161 (61.7 bits), Expect = 1.4e-09, Sum P(3) = 1.4e-09
Identities = 52/150 (34%), Positives = 76/150 (50%)
Query: 230 ITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKE--LLPRRVVALDGIFIKD 287
I QV ++HS +S+ G+VYT G G G+LGH GD++ L+PR V L G
Sbjct: 179 IKQVVLCKFHSVFLSQKGQVYTCGHGPGGRLGH-----GDEQTCLVPRLVEGLSGHNCSQ 233
Query: 288 VACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDT-YFRNIPILVVPNG 346
VA H+ LT G +Y +G + QLGL P S + +P + Y + I+ G
Sbjct: 234 VAAAKDHTVVLTEDGCVYTFGLNIFHQLGLIPPPSSCN-VPRQMQAKYLKGRTII----G 288
Query: 347 VQLVACGHSHTLVYMRDGRIHGWGYNSYGQ 376
V A G HT+++ R+ ++ G N GQ
Sbjct: 289 V---AAGRFHTVLWTREA-VYTMGLNG-GQ 313
Score = 127 (49.8 bits), Expect = 6.3e-06, Sum P(3) = 6.3e-06
Identities = 44/130 (33%), Positives = 61/130 (46%)
Query: 248 EVYTWGLGSVGQLGHCSLQSGDK-ELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYA 306
+VYTWG + LGH S S EL+ + + GI+IK V HS L+ KG +Y
Sbjct: 143 DVYTWGDNTNFTLGHGSQNSKHHPELVD--LFSRSGIYIKQVVLCKFHSVFLSQKGQVYT 200
Query: 307 WGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRI 366
G G+LG G + L+P R + L N Q VA HT+V DG +
Sbjct: 201 CGHGPGGRLGHGDEQTC--LVP-------RLVEGLSGHNCSQ-VAAAKDHTVVLTEDGCV 250
Query: 367 HGWGYNSYGQ 376
+ +G N + Q
Sbjct: 251 YTFGLNIFHQ 260
Score = 71 (30.1 bits), Expect = 2.4e-10, Sum P(3) = 2.4e-10
Identities = 15/37 (40%), Positives = 22/37 (59%)
Query: 417 LKELCEFRLAESVTLSNASEIEDVASRTGSEALARLC 453
LKE+CE L E +TL NA+ + + A+ +E L C
Sbjct: 859 LKEICEVALTEKLTLKNAAMLLEFAAMYNAEQLKLSC 895
Score = 37 (18.1 bits), Expect = 2.4e-10, Sum P(3) = 2.4e-10
Identities = 8/22 (36%), Positives = 11/22 (50%)
Query: 398 VRKLAAGGGHSAVLADACSLKE 419
++K+ GGH D LKE
Sbjct: 379 LKKVLVSGGHMEYKVDPEHLKE 400
Score = 37 (18.1 bits), Expect = 6.3e-07, Sum P(3) = 6.3e-07
Identities = 12/47 (25%), Positives = 21/47 (44%)
Query: 421 CEFRLAESVTLSNASEIEDVASRTGSEALARLCERLRE-HSLHGDEF 466
C F + +S ++ EI V+S + E +L E ++H F
Sbjct: 523 CNFAVLQSDPKTSLYEIPTVSSSSFFEEFGKLLRETDEMDNIHDVTF 569
>ZFIN|ZDB-GENE-030616-132 [details] [associations]
symbol:mycbp2 "MYC binding protein 2" species:7955
"Danio rerio" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA;IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0021986 "habenula
development" evidence=IMP] [GO:0016198 "axon choice point
recognition" evidence=IMP] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0007411 "axon guidance" evidence=IMP] [GO:0031290 "retinal
ganglion cell axon guidance" evidence=IMP] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0042068 "regulation of pteridine
metabolic process" evidence=IMP] InterPro:IPR001841
InterPro:IPR027047 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
INTERPRO:IPR000408 Pfam:PF00415 ZFIN:ZDB-GENE-030616-132
GO:GO:0005737 Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0046872
GO:GO:0008270 GO:GO:0016198 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 Gene3D:3.30.40.10 InterPro:IPR014756
InterPro:IPR013083 SUPFAM:SSF81296 InterPro:IPR008979
SUPFAM:SSF49785 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 InterPro:IPR004939 PROSITE:PS51284 GO:GO:0031290
InterPro:IPR012983 Pfam:PF08005 InterPro:IPR017868 Pfam:PF00630
PROSITE:PS50194 GeneTree:ENSGT00390000011403 PANTHER:PTHR12846
GO:GO:0021986 EMBL:BX510646 EMBL:AL840634 EMBL:CR628366
EMBL:CU138551 IPI:IPI00993071 Ensembl:ENSDART00000124901
ArrayExpress:F1QI76 Bgee:F1QI76 GO:GO:0042068 Uniprot:F1QI76
Length = 4648
Score = 156 (60.0 bits), Expect = 2.8e-10, Sum P(5) = 2.8e-10
Identities = 38/91 (41%), Positives = 49/91 (53%)
Query: 226 ELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFI 285
EL + QVSCG +HS + ENG+VYT+G G GQLGH + S P V AL G
Sbjct: 924 ELRAV-QVSCGFHHSVVLMENGDVYTFGYGQHGQLGHGDVNSRGS---PTLVQALPGPST 979
Query: 286 KDVACGGVHSCALTSKGALYAWGGSQAGQLG 316
+ V G H+ L G ++ +G GQLG
Sbjct: 980 Q-VTAGSNHTAVLLMDGQVFTFGSFSKGQLG 1009
Score = 103 (41.3 bits), Expect = 2.8e-10, Sum P(5) = 2.8e-10
Identities = 46/207 (22%), Positives = 90/207 (43%)
Query: 31 SGQTGRKGRERQLRIPKQLPP--ELFGCPAGANSRWLDIACGHE--HTAAVASDGTLFTW 86
SG+ G+ + L I + P + P + + + + GH+ H VA DG++F
Sbjct: 538 SGKIYYTGKYQSLGIKQGGPSSGKWVELPVTKSPKIVQFSVGHDGSHALLVAEDGSVFFT 597
Query: 87 GANEFGQLGDGTEEGRK----HPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
G+ G+ G+ T+ R+ P+K+ +L+++ +C ++ + + DG
Sbjct: 598 GSASKGEDGESTKSRRQPKPYKPKKMIKLETKMAVYTACNNGSSSIVTK----DG----- 648
Query: 143 RLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRG 202
L+++G++ + + + QV+ G H L++ G + +G N GQ GR
Sbjct: 649 ELYMFGKDAIYSDSTCQVSDLKGH-FVTQVAMGKAHTCVLTKSGEVWTFGVNNKGQCGRD 707
Query: 203 ITCEGLQGPRV-IKGYAKFLDEAPELE 228
G ++ A +DE E E
Sbjct: 708 TGAMSQAGKAFGVENMATAMDEDLEDE 734
Score = 101 (40.6 bits), Expect = 9.9e-05, Sum P(4) = 9.9e-05
Identities = 32/91 (35%), Positives = 41/91 (45%)
Query: 288 VACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILV--VPN 345
V+CG HS L G +Y +G Q GQLG G D R P LV +P
Sbjct: 930 VSCGFHHSVVLMENGDVYTFGYGQHGQLGHG-------------DVNSRGSPTLVQALPG 976
Query: 346 GVQLVACGHSHTLVYMRDGRIHGWGYNSYGQ 376
V G +HT V + DG++ +G S GQ
Sbjct: 977 PSTQVTAGSNHTAVLLMDGQVFTFGSFSKGQ 1007
Score = 98 (39.6 bits), Expect = 0.00061, Sum P(4) = 0.00061
Identities = 32/120 (26%), Positives = 50/120 (41%)
Query: 197 GQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGS 256
G +G E + R K Y E + +C S+ V+++GE+Y +G +
Sbjct: 598 GSASKGEDGESTKSRRQPKPYKPKKMIKLETKMAVYTACNNGSSSIVTKDGELYMFGKDA 657
Query: 257 VGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLG 316
+ C Q D L G F+ VA G H+C LT G ++ +G + GQ G
Sbjct: 658 IYSDSTC--QVSD----------LKGHFVTQVAMGKAHTCVLTKSGEVWTFGVNNKGQCG 705
Score = 97 (39.2 bits), Expect = 0.00061, Sum P(4) = 0.00061
Identities = 20/62 (32%), Positives = 33/62 (53%)
Query: 350 VACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSA 409
V+CG H++V M +G ++ +GY +GQ + P+ V G ++ AG H+A
Sbjct: 930 VSCGFHHSVVLMENGDVYTFGYGQHGQLGHGDVNSRGSPTLVQALPGPSTQVTAGSNHTA 989
Query: 410 VL 411
VL
Sbjct: 990 VL 991
Score = 43 (20.2 bits), Expect = 2.8e-10, Sum P(5) = 2.8e-10
Identities = 14/46 (30%), Positives = 25/46 (54%)
Query: 411 LADACSLKELCEFRLAESVTLSNASEI-EDVASRTGSE--ALARLC 453
LAD+ ++K + EFR S++S+ +R G+E A+ +C
Sbjct: 4299 LADSKTMKAMVEFREHTGKPASSSSDACRFCGTRHGTELSAVGSVC 4344
Score = 41 (19.5 bits), Expect = 2.8e-10, Sum P(5) = 2.8e-10
Identities = 10/32 (31%), Positives = 16/32 (50%)
Query: 318 GPQTRSFSLIPNESDTYFRNIPILVVPNGVQL 349
G + S + P S + +N+P V P+ V L
Sbjct: 2806 GRSSPSSTSSPRSSSPHDKNLPAKVSPSKVHL 2837
Score = 40 (19.1 bits), Expect = 0.00025, Sum P(5) = 0.00025
Identities = 13/31 (41%), Positives = 16/31 (51%)
Query: 123 AHCTAAIA---EPRENDGTISTSRLWVWGQN 150
+H AAI E E +GTI+ L GQN
Sbjct: 421 SHNMAAIKINPETLEQEGTITVPGLQADGQN 451
Score = 39 (18.8 bits), Expect = 2.8e-10, Sum P(5) = 2.8e-10
Identities = 7/20 (35%), Positives = 11/20 (55%)
Query: 396 GEVRKLAAGGGHSAVLADAC 415
GE+ +LA GG + + C
Sbjct: 3198 GEMAQLAMGGPEKDTICELC 3217
Score = 39 (18.8 bits), Expect = 0.00030, Sum P(5) = 0.00030
Identities = 6/14 (42%), Positives = 10/14 (71%)
Query: 23 IYVWGYNHSGQTGR 36
++ +G N+ GQ GR
Sbjct: 693 VWTFGVNNKGQCGR 706
Score = 37 (18.1 bits), Expect = 4.2e-10, Sum P(4) = 4.2e-10
Identities = 12/36 (33%), Positives = 14/36 (38%)
Query: 393 WCVGEVRKLAAGGGHSAVLADACSLKELCEFRLAES 428
W GE K+A S C + L FRL S
Sbjct: 3845 WKEGESIKIAGQISASVAQQKNCEAETLRVFRLITS 3880
>UNIPROTKB|F1RQL8 [details] [associations]
symbol:IBTK "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0051209 "release of sequestered calcium ion into
cytosol" evidence=IEA] [GO:0030292 "protein tyrosine kinase
inhibitor activity" evidence=IEA] [GO:0019901 "protein kinase
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR002110
InterPro:IPR000210 InterPro:IPR013069 Pfam:PF00651 PROSITE:PS50088
PROSITE:PS50097 SMART:SM00225 SMART:SM00248 INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005634 GO:GO:0005737 GO:GO:0051209
Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403
PROSITE:PS50297 Gene3D:3.30.710.10 InterPro:IPR011333
SUPFAM:SSF54695 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS50012 GO:GO:0030292
OMA:VSALHHK GeneTree:ENSGT00700000104160 EMBL:CU392845
Ensembl:ENSSSCT00000004926 Uniprot:F1RQL8
Length = 1346
Score = 172 (65.6 bits), Expect = 3.5e-10, Sum P(3) = 3.5e-10
Identities = 74/252 (29%), Positives = 110/252 (43%)
Query: 73 HTAAVASDGT-LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSE--FVKSIS-CGAHCTAA 128
H +D T ++TWG N LG G++ + HPE V ++K + C H +
Sbjct: 133 HVVFKNTDPTDVYTWGDNTNFTLGHGSQNSKHHPELVDLFSRSGVYIKQVVLCKFH-SVF 191
Query: 129 IAEPRE--NDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECG 186
+++ + G RL G Q PRL G N QV+ H V L+E G
Sbjct: 192 LSQKGQVYTCGHGPGGRLG-HGDEQTCLVPRLVEGLSGHNC--SQVAAAKDHTVVLTEDG 248
Query: 187 LLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSEN 246
+ +G N + QLG PR ++ AK+L I V+ G +H+ +
Sbjct: 249 CVYTFGLNIFHQLGIIPPPSNCNVPRQMQ--AKYLKG----RTIIGVAAGRFHTVLWTRE 302
Query: 247 GEVYTWGLGSVGQLGHCSLQSGDKELL-PRRVVALD--GIFIKDVACGGVHSCALTSKGA 303
VYT GL GQLGH SG+K + PR+V AL I + VA + +T++G
Sbjct: 303 A-VYTLGLNG-GQLGHLLDPSGEKCVTAPRQVSALHHKDIALSLVAASDGATVCVTARGD 360
Query: 304 LYAWGGSQAGQL 315
+Y Q +L
Sbjct: 361 IYLLADYQCKKL 372
Score = 156 (60.0 bits), Expect = 1.9e-08, Sum P(3) = 1.9e-08
Identities = 56/189 (29%), Positives = 92/189 (48%)
Query: 191 WGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVY 250
WG N LG G + P ++ +++ ++++ V C ++HS +S+ G+VY
Sbjct: 147 WGDNTNFTLGHG-SQNSKHHPELVDLFSR---SGVYIKQV--VLC-KFHSVFLSQKGQVY 199
Query: 251 TWGLGSVGQLGHCSLQSGDKE--LLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWG 308
T G G G+LGH GD++ L+PR V L G VA H+ LT G +Y +G
Sbjct: 200 TCGHGPGGRLGH-----GDEQTCLVPRLVEGLSGHNCSQVAAAKDHTVVLTEDGCVYTFG 254
Query: 309 GSQAGQLGLGPQTRSFSLIPNESDT-YFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIH 367
+ QLG+ P + + +P + Y + I+ GV A G HT+++ R+ ++
Sbjct: 255 LNIFHQLGIIPPPSNCN-VPRQMQAKYLKGRTII----GV---AAGRFHTVLWTREA-VY 305
Query: 368 GWGYNSYGQ 376
G N GQ
Sbjct: 306 TLGLNG-GQ 313
Score = 65 (27.9 bits), Expect = 3.5e-10, Sum P(3) = 3.5e-10
Identities = 14/37 (37%), Positives = 21/37 (56%)
Query: 417 LKELCEFRLAESVTLSNASEIEDVASRTGSEALARLC 453
LKE+CE L E +TL N+ + + A+ +E L C
Sbjct: 857 LKEICEVALTEKLTLKNSVMLLEFAAMYNAEQLKLSC 893
Score = 37 (18.1 bits), Expect = 3.5e-10, Sum P(3) = 3.5e-10
Identities = 8/22 (36%), Positives = 11/22 (50%)
Query: 398 VRKLAAGGGHSAVLADACSLKE 419
++K+ GGH D LKE
Sbjct: 379 LKKVLVSGGHMEYKVDPEHLKE 400
>MGI|MGI:1918677 [details] [associations]
symbol:Ibtk "inhibitor of Bruton agammaglobulinemia tyrosine
kinase" species:10090 "Mus musculus" [GO:0001933 "negative
regulation of protein phosphorylation" evidence=ISO] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0016020 "membrane" evidence=IEA]
[GO:0019901 "protein kinase binding" evidence=ISO] [GO:0030292
"protein tyrosine kinase inhibitor activity" evidence=ISO]
[GO:0051209 "release of sequestered calcium ion into cytosol"
evidence=ISO] [GO:0061099 "negative regulation of protein tyrosine
kinase activity" evidence=ISO] InterPro:IPR002110
InterPro:IPR000210 InterPro:IPR013069 Pfam:PF00651 PROSITE:PS50088
PROSITE:PS50097 SMART:SM00225 SMART:SM00248 MGI:MGI:1918677
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005634 GO:GO:0005737
GO:GO:0016020 GO:GO:0051209 Gene3D:1.25.40.20 InterPro:IPR020683
Pfam:PF12796 SUPFAM:SSF48403 PROSITE:PS50297 EMBL:CH466522
Gene3D:3.30.710.10 InterPro:IPR011333 SUPFAM:SSF54695
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 eggNOG:COG5184
GO:GO:0030292 CTD:25998 HOVERGEN:HBG081779 OMA:VSALHHK
OrthoDB:EOG4J6RQ1 ChiTaRS:IBTK EMBL:BC137798 EMBL:AK030895
EMBL:AK077387 EMBL:AK129353 IPI:IPI00660767 IPI:IPI00750982
RefSeq:NP_001074751.1 UniGene:Mm.22315 UniGene:Mm.487092
ProteinModelPortal:Q6ZPR6 SMR:Q6ZPR6 PhosphoSite:Q6ZPR6
PaxDb:Q6ZPR6 PRIDE:Q6ZPR6 Ensembl:ENSMUST00000039213 GeneID:108837
KEGG:mmu:108837 GeneTree:ENSGT00700000104160 HOGENOM:HOG000090207
InParanoid:Q6ZPR6 NextBio:361375 Bgee:Q6ZPR6 Genevestigator:Q6ZPR6
Uniprot:Q6ZPR6
Length = 1352
Score = 166 (63.5 bits), Expect = 4.4e-10, Sum P(2) = 4.4e-10
Identities = 71/242 (29%), Positives = 107/242 (44%)
Query: 73 HTAAVASDGT-LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSE--FVKSIS-CGAHCTAA 128
H +D T ++TWG N LG G++ + HPE + +VK + C H +
Sbjct: 133 HVVFKDTDPTEVYTWGDNTNFTLGHGSQNSKHHPELLDLFSRSGVYVKQVVLCKFH-SVF 191
Query: 129 IAEPRE--NDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECG 186
+++ + G RL G Q PRL G N QV+ H V L++ G
Sbjct: 192 LSQKGQVYTCGHGRGGRLG-HGDEQTCLVPRLVEGLSGHNC--SQVAAAKDHTVVLTDDG 248
Query: 187 LLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSEN 246
+ +G N + QLG PR I+ AK+L I V+ G +H+ +
Sbjct: 249 CVYTFGLNMFHQLGIIPPPASCNVPRQIQ--AKYLKG----RTIIGVAAGRFHTVLWTRE 302
Query: 247 GEVYTWGLGSVGQLGHCSLQSGDKELL-PRRVVALD--GIFIKDVACGGVHSCALTSKGA 303
VYT GL GQLGH +G+K + PR+V AL I + VA + +T++G
Sbjct: 303 A-VYTLGLNG-GQLGHLLDPNGEKCVTTPRQVSALHHKDIAVSLVAASDGATVCVTTRGD 360
Query: 304 LY 305
+Y
Sbjct: 361 IY 362
Score = 159 (61.0 bits), Expect = 2.5e-09, Sum P(2) = 2.5e-09
Identities = 50/150 (33%), Positives = 76/150 (50%)
Query: 230 ITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKE--LLPRRVVALDGIFIKD 287
+ QV ++HS +S+ G+VYT G G G+LGH GD++ L+PR V L G
Sbjct: 179 VKQVVLCKFHSVFLSQKGQVYTCGHGRGGRLGH-----GDEQTCLVPRLVEGLSGHNCSQ 233
Query: 288 VACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDT-YFRNIPILVVPNG 346
VA H+ LT G +Y +G + QLG+ P S + +P + Y + I+ G
Sbjct: 234 VAAAKDHTVVLTDDGCVYTFGLNMFHQLGIIPPPASCN-VPRQIQAKYLKGRTII----G 288
Query: 347 VQLVACGHSHTLVYMRDGRIHGWGYNSYGQ 376
V A G HT+++ R+ ++ G N GQ
Sbjct: 289 V---AAGRFHTVLWTREA-VYTLGLNG-GQ 313
Score = 132 (51.5 bits), Expect = 2.1e-06, Sum P(2) = 2.1e-06
Identities = 44/130 (33%), Positives = 62/130 (47%)
Query: 248 EVYTWGLGSVGQLGHCSLQSGDK-ELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYA 306
EVYTWG + LGH S S ELL + + G+++K V HS L+ KG +Y
Sbjct: 143 EVYTWGDNTNFTLGHGSQNSKHHPELLD--LFSRSGVYVKQVVLCKFHSVFLSQKGQVYT 200
Query: 307 WGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRI 366
G + G+LG G + L+P R + L N Q VA HT+V DG +
Sbjct: 201 CGHGRGGRLGHGDEQTC--LVP-------RLVEGLSGHNCSQ-VAAAKDHTVVLTDDGCV 250
Query: 367 HGWGYNSYGQ 376
+ +G N + Q
Sbjct: 251 YTFGLNMFHQ 260
Score = 64 (27.6 bits), Expect = 4.4e-10, Sum P(2) = 4.4e-10
Identities = 14/37 (37%), Positives = 22/37 (59%)
Query: 417 LKELCEFRLAESVTLSNASEIEDVASRTGSEALARLC 453
LKE+CE L E++TL NA+ + + A+ + L C
Sbjct: 860 LKEICEVALTENLTLKNAAMLLEFAALYNAGQLKLSC 896
Score = 37 (18.1 bits), Expect = 2.6e-07, Sum P(2) = 2.6e-07
Identities = 13/47 (27%), Positives = 20/47 (42%)
Query: 421 CEFRLAESVTLSNASEIEDVASRTGSEALARLCERLRE-HSLHGDEF 466
C F + +S ++ EI V+S + E +L E S H F
Sbjct: 523 CNFAILQSDPKTSLYEIPVVSSSSFFEEFGKLLRETDEMDSFHDVTF 569
>UNIPROTKB|E9PDR5 [details] [associations]
symbol:IBTK "Inhibitor of Bruton tyrosine kinase"
species:9606 "Homo sapiens" [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] InterPro:IPR002110
InterPro:IPR000210 InterPro:IPR013069 Pfam:PF00651 PROSITE:PS50088
PROSITE:PS50097 SMART:SM00225 SMART:SM00248 INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005634 Gene3D:1.25.40.20 InterPro:IPR020683
Pfam:PF12796 SUPFAM:SSF48403 PROSITE:PS50297 Gene3D:3.30.710.10
InterPro:IPR011333 SUPFAM:SSF54695 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PROSITE:PS50012 EMBL:AL050333
HGNC:HGNC:17853 ChiTaRS:IBTK IPI:IPI00964822
ProteinModelPortal:E9PDR5 SMR:E9PDR5 Ensembl:ENST00000503631
UCSC:uc011dyw.1 ArrayExpress:E9PDR5 Bgee:E9PDR5 Uniprot:E9PDR5
Length = 1152
Score = 163 (62.4 bits), Expect = 1.2e-09, Sum P(3) = 1.2e-09
Identities = 73/243 (30%), Positives = 108/243 (44%)
Query: 73 HTAAVASDGT-LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSE--FVKSIS-CGAHCTAA 128
H +D T ++TWG N LG G++ + HPE V ++K + C H +
Sbjct: 133 HVVFKNTDPTDVYTWGDNTNFTLGHGSQNSKHHPELVDLFSRSGIYIKQVVLCKFH-SVF 191
Query: 129 IAEPRE--NDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECG 186
+++ + G RL G Q PRL G N QV+ H V L+E G
Sbjct: 192 LSQKGQVYTCGHGPGGRLG-HGDEQTCLVPRLVEGLNGHNC--SQVAAAKDHTVVLTEDG 248
Query: 187 LLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSEN 246
+ +G N + QLG PR I+ AK+L I V+ G +H+ +
Sbjct: 249 CVYTFGLNIFHQLGIIPPPSSCNVPRQIQ--AKYLKG----RTIIGVAAGRFHTVLWTRE 302
Query: 247 GEVYTWGLGSVGQLGHCSLQ-SGDKELL-PRRVVALD--GIFIKDVACGGVHSCALTSKG 302
VYT GL GQLG C L +G+K + PR+V AL I + VA + +T++G
Sbjct: 303 A-VYTMGLNG-GQLG-CLLDPNGEKCVTAPRQVSALHHKDIALSLVAASDGATVCVTTRG 359
Query: 303 ALY 305
+Y
Sbjct: 360 DIY 362
Score = 159 (61.0 bits), Expect = 3.4e-09, Sum P(3) = 3.4e-09
Identities = 51/150 (34%), Positives = 77/150 (51%)
Query: 230 ITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKE--LLPRRVVALDGIFIKD 287
I QV ++HS +S+ G+VYT G G G+LGH GD++ L+PR V L+G
Sbjct: 179 IKQVVLCKFHSVFLSQKGQVYTCGHGPGGRLGH-----GDEQTCLVPRLVEGLNGHNCSQ 233
Query: 288 VACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDT-YFRNIPILVVPNG 346
VA H+ LT G +Y +G + QLG+ P S + +P + Y + I+ G
Sbjct: 234 VAAAKDHTVVLTEDGCVYTFGLNIFHQLGIIPPPSSCN-VPRQIQAKYLKGRTII----G 288
Query: 347 VQLVACGHSHTLVYMRDGRIHGWGYNSYGQ 376
V A G HT+++ R+ ++ G N GQ
Sbjct: 289 V---AAGRFHTVLWTREA-VYTMGLNG-GQ 313
Score = 126 (49.4 bits), Expect = 1.2e-05, Sum P(3) = 1.2e-05
Identities = 44/130 (33%), Positives = 61/130 (46%)
Query: 248 EVYTWGLGSVGQLGHCSLQSGDK-ELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYA 306
+VYTWG + LGH S S EL+ + + GI+IK V HS L+ KG +Y
Sbjct: 143 DVYTWGDNTNFTLGHGSQNSKHHPELVD--LFSRSGIYIKQVVLCKFHSVFLSQKGQVYT 200
Query: 307 WGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRI 366
G G+LG G + L+P R + L N Q VA HT+V DG +
Sbjct: 201 CGHGPGGRLGHGDEQTC--LVP-------RLVEGLNGHNCSQ-VAAAKDHTVVLTEDGCV 250
Query: 367 HGWGYNSYGQ 376
+ +G N + Q
Sbjct: 251 YTFGLNIFHQ 260
Score = 67 (28.6 bits), Expect = 1.2e-09, Sum P(3) = 1.2e-09
Identities = 14/37 (37%), Positives = 22/37 (59%)
Query: 417 LKELCEFRLAESVTLSNASEIEDVASRTGSEALARLC 453
LKE+CE L E +TL NA+ + + A+ ++ L C
Sbjct: 658 LKEICEVALTEKLTLKNAAMLLEFAAMYSAKQLKLSC 694
Score = 37 (18.1 bits), Expect = 1.2e-09, Sum P(3) = 1.2e-09
Identities = 8/22 (36%), Positives = 11/22 (50%)
Query: 398 VRKLAAGGGHSAVLADACSLKE 419
++K+ GGH D LKE
Sbjct: 379 LKKVLVSGGHMEYKVDPEHLKE 400
>UNIPROTKB|E7EPI0 [details] [associations]
symbol:IBTK "Inhibitor of Bruton tyrosine kinase"
species:9606 "Homo sapiens" [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] InterPro:IPR002110
InterPro:IPR000210 InterPro:IPR013069 Pfam:PF00651 PROSITE:PS50088
PROSITE:PS50097 SMART:SM00225 SMART:SM00248 INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005634 Gene3D:1.25.40.20 InterPro:IPR020683
Pfam:PF12796 SUPFAM:SSF48403 PROSITE:PS50297 Gene3D:3.30.710.10
InterPro:IPR011333 SUPFAM:SSF54695 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PROSITE:PS50012 EMBL:AL050333
HGNC:HGNC:17853 ChiTaRS:IBTK IPI:IPI00964356
ProteinModelPortal:E7EPI0 SMR:E7EPI0 Ensembl:ENST00000510291
UCSC:uc011dyv.1 ArrayExpress:E7EPI0 Bgee:E7EPI0 Uniprot:E7EPI0
Length = 1338
Score = 163 (62.4 bits), Expect = 2.1e-09, Sum P(3) = 2.1e-09
Identities = 73/243 (30%), Positives = 108/243 (44%)
Query: 73 HTAAVASDGT-LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSE--FVKSIS-CGAHCTAA 128
H +D T ++TWG N LG G++ + HPE V ++K + C H +
Sbjct: 133 HVVFKNTDPTDVYTWGDNTNFTLGHGSQNSKHHPELVDLFSRSGIYIKQVVLCKFH-SVF 191
Query: 129 IAEPRE--NDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECG 186
+++ + G RL G Q PRL G N QV+ H V L+E G
Sbjct: 192 LSQKGQVYTCGHGPGGRLG-HGDEQTCLVPRLVEGLNGHNC--SQVAAAKDHTVVLTEDG 248
Query: 187 LLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSEN 246
+ +G N + QLG PR I+ AK+L I V+ G +H+ +
Sbjct: 249 CVYTFGLNIFHQLGIIPPPSSCNVPRQIQ--AKYLKG----RTIIGVAAGRFHTVLWTRE 302
Query: 247 GEVYTWGLGSVGQLGHCSLQ-SGDKELL-PRRVVALD--GIFIKDVACGGVHSCALTSKG 302
VYT GL GQLG C L +G+K + PR+V AL I + VA + +T++G
Sbjct: 303 A-VYTMGLNG-GQLG-CLLDPNGEKCVTAPRQVSALHHKDIALSLVAASDGATVCVTTRG 359
Query: 303 ALY 305
+Y
Sbjct: 360 DIY 362
Score = 159 (61.0 bits), Expect = 5.6e-09, Sum P(3) = 5.6e-09
Identities = 51/150 (34%), Positives = 77/150 (51%)
Query: 230 ITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKE--LLPRRVVALDGIFIKD 287
I QV ++HS +S+ G+VYT G G G+LGH GD++ L+PR V L+G
Sbjct: 179 IKQVVLCKFHSVFLSQKGQVYTCGHGPGGRLGH-----GDEQTCLVPRLVEGLNGHNCSQ 233
Query: 288 VACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDT-YFRNIPILVVPNG 346
VA H+ LT G +Y +G + QLG+ P S + +P + Y + I+ G
Sbjct: 234 VAAAKDHTVVLTEDGCVYTFGLNIFHQLGIIPPPSSCN-VPRQIQAKYLKGRTII----G 288
Query: 347 VQLVACGHSHTLVYMRDGRIHGWGYNSYGQ 376
V A G HT+++ R+ ++ G N GQ
Sbjct: 289 V---AAGRFHTVLWTREA-VYTMGLNG-GQ 313
Score = 126 (49.4 bits), Expect = 1.9e-05, Sum P(3) = 1.9e-05
Identities = 44/130 (33%), Positives = 61/130 (46%)
Query: 248 EVYTWGLGSVGQLGHCSLQSGDK-ELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYA 306
+VYTWG + LGH S S EL+ + + GI+IK V HS L+ KG +Y
Sbjct: 143 DVYTWGDNTNFTLGHGSQNSKHHPELVD--LFSRSGIYIKQVVLCKFHSVFLSQKGQVYT 200
Query: 307 WGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRI 366
G G+LG G + L+P R + L N Q VA HT+V DG +
Sbjct: 201 CGHGPGGRLGHGDEQTC--LVP-------RLVEGLNGHNCSQ-VAAAKDHTVVLTEDGCV 250
Query: 367 HGWGYNSYGQ 376
+ +G N + Q
Sbjct: 251 YTFGLNIFHQ 260
Score = 67 (28.6 bits), Expect = 2.1e-09, Sum P(3) = 2.1e-09
Identities = 14/37 (37%), Positives = 22/37 (59%)
Query: 417 LKELCEFRLAESVTLSNASEIEDVASRTGSEALARLC 453
LKE+CE L E +TL NA+ + + A+ ++ L C
Sbjct: 859 LKEICEVALTEKLTLKNAAMLLEFAAMYSAKQLKLSC 895
Score = 40 (19.1 bits), Expect = 1.1e-06, Sum P(3) = 1.1e-06
Identities = 13/47 (27%), Positives = 21/47 (44%)
Query: 421 CEFRLAESVTLSNASEIEDVASRTGSEALARLCERLRE-HSLHGDEF 466
C F + +S ++ EI V+S + E +L E S+H F
Sbjct: 522 CNFAILQSDPKTSLYEIPAVSSSSFFEEFGKLLREADEMDSIHDVTF 568
Score = 37 (18.1 bits), Expect = 2.1e-09, Sum P(3) = 2.1e-09
Identities = 8/22 (36%), Positives = 11/22 (50%)
Query: 398 VRKLAAGGGHSAVLADACSLKE 419
++K+ GGH D LKE
Sbjct: 379 LKKVLVSGGHMEYKVDPEHLKE 400
>UNIPROTKB|Q9P2D0 [details] [associations]
symbol:IBTK "Inhibitor of Bruton tyrosine kinase"
species:9606 "Homo sapiens" [GO:0016020 "membrane" evidence=IEA]
[GO:0001933 "negative regulation of protein phosphorylation"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0019901
"protein kinase binding" evidence=IDA] [GO:0030292 "protein
tyrosine kinase inhibitor activity" evidence=IDA] [GO:0051209
"release of sequestered calcium ion into cytosol" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0061099 "negative regulation of protein tyrosine
kinase activity" evidence=IDA] InterPro:IPR002110
InterPro:IPR000210 InterPro:IPR013069 Pfam:PF00651 PROSITE:PS50088
PROSITE:PS50097 SMART:SM00225 SMART:SM00248 INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005634 GO:GO:0005737 GO:GO:0019901
GO:GO:0016020 Pathway_Interaction_DB:bcr_5pathway GO:GO:0051209
Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403
PROSITE:PS50297 Gene3D:3.30.710.10 InterPro:IPR011333
SUPFAM:SSF54695 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
eggNOG:COG5184 GO:GO:0030292 EMBL:DQ005633 EMBL:DQ005634
EMBL:DQ005635 EMBL:AB037838 EMBL:AL050333 EMBL:BC027490
EMBL:BC038244 EMBL:BC042171 EMBL:BC113696 EMBL:BC113698
EMBL:AL050018 EMBL:AF235049 IPI:IPI00792333 IPI:IPI00829736
IPI:IPI00910313 PIR:T08705 RefSeq:NP_056340.2 UniGene:Hs.306425
ProteinModelPortal:Q9P2D0 SMR:Q9P2D0 IntAct:Q9P2D0 MINT:MINT-215747
STRING:Q9P2D0 PhosphoSite:Q9P2D0 DMDM:134034141 PaxDb:Q9P2D0
PRIDE:Q9P2D0 DNASU:25998 Ensembl:ENST00000306270 GeneID:25998
KEGG:hsa:25998 UCSC:uc003pjl.1 UCSC:uc003pjm.2 CTD:25998
GeneCards:GC06M082879 HGNC:HGNC:17853 HPA:HPA023826 MIM:606457
neXtProt:NX_Q9P2D0 PharmGKB:PA134898277 HOVERGEN:HBG081779
InParanoid:Q9P2D0 OMA:VSALHHK OrthoDB:EOG4J6RQ1 ChiTaRS:IBTK
GenomeRNAi:25998 NextBio:47714 ArrayExpress:Q9P2D0 Bgee:Q9P2D0
Genevestigator:Q9P2D0 Uniprot:Q9P2D0
Length = 1353
Score = 163 (62.4 bits), Expect = 2.2e-09, Sum P(3) = 2.2e-09
Identities = 73/243 (30%), Positives = 108/243 (44%)
Query: 73 HTAAVASDGT-LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSE--FVKSIS-CGAHCTAA 128
H +D T ++TWG N LG G++ + HPE V ++K + C H +
Sbjct: 133 HVVFKNTDPTDVYTWGDNTNFTLGHGSQNSKHHPELVDLFSRSGIYIKQVVLCKFH-SVF 191
Query: 129 IAEPRE--NDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECG 186
+++ + G RL G Q PRL G N QV+ H V L+E G
Sbjct: 192 LSQKGQVYTCGHGPGGRLG-HGDEQTCLVPRLVEGLNGHNC--SQVAAAKDHTVVLTEDG 248
Query: 187 LLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSEN 246
+ +G N + QLG PR I+ AK+L I V+ G +H+ +
Sbjct: 249 CVYTFGLNIFHQLGIIPPPSSCNVPRQIQ--AKYLKG----RTIIGVAAGRFHTVLWTRE 302
Query: 247 GEVYTWGLGSVGQLGHCSLQ-SGDKELL-PRRVVALD--GIFIKDVACGGVHSCALTSKG 302
VYT GL GQLG C L +G+K + PR+V AL I + VA + +T++G
Sbjct: 303 A-VYTMGLNG-GQLG-CLLDPNGEKCVTAPRQVSALHHKDIALSLVAASDGATVCVTTRG 359
Query: 303 ALY 305
+Y
Sbjct: 360 DIY 362
Score = 159 (61.0 bits), Expect = 5.8e-09, Sum P(3) = 5.8e-09
Identities = 51/150 (34%), Positives = 77/150 (51%)
Query: 230 ITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKE--LLPRRVVALDGIFIKD 287
I QV ++HS +S+ G+VYT G G G+LGH GD++ L+PR V L+G
Sbjct: 179 IKQVVLCKFHSVFLSQKGQVYTCGHGPGGRLGH-----GDEQTCLVPRLVEGLNGHNCSQ 233
Query: 288 VACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDT-YFRNIPILVVPNG 346
VA H+ LT G +Y +G + QLG+ P S + +P + Y + I+ G
Sbjct: 234 VAAAKDHTVVLTEDGCVYTFGLNIFHQLGIIPPPSSCN-VPRQIQAKYLKGRTII----G 288
Query: 347 VQLVACGHSHTLVYMRDGRIHGWGYNSYGQ 376
V A G HT+++ R+ ++ G N GQ
Sbjct: 289 V---AAGRFHTVLWTREA-VYTMGLNG-GQ 313
Score = 126 (49.4 bits), Expect = 2.0e-05, Sum P(3) = 2.0e-05
Identities = 44/130 (33%), Positives = 61/130 (46%)
Query: 248 EVYTWGLGSVGQLGHCSLQSGDK-ELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYA 306
+VYTWG + LGH S S EL+ + + GI+IK V HS L+ KG +Y
Sbjct: 143 DVYTWGDNTNFTLGHGSQNSKHHPELVD--LFSRSGIYIKQVVLCKFHSVFLSQKGQVYT 200
Query: 307 WGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRI 366
G G+LG G + L+P R + L N Q VA HT+V DG +
Sbjct: 201 CGHGPGGRLGHGDEQTC--LVP-------RLVEGLNGHNCSQ-VAAAKDHTVVLTEDGCV 250
Query: 367 HGWGYNSYGQ 376
+ +G N + Q
Sbjct: 251 YTFGLNIFHQ 260
Score = 67 (28.6 bits), Expect = 2.2e-09, Sum P(3) = 2.2e-09
Identities = 14/37 (37%), Positives = 22/37 (59%)
Query: 417 LKELCEFRLAESVTLSNASEIEDVASRTGSEALARLC 453
LKE+CE L E +TL NA+ + + A+ ++ L C
Sbjct: 859 LKEICEVALTEKLTLKNAAMLLEFAAMYSAKQLKLSC 895
Score = 40 (19.1 bits), Expect = 1.1e-06, Sum P(3) = 1.1e-06
Identities = 13/47 (27%), Positives = 21/47 (44%)
Query: 421 CEFRLAESVTLSNASEIEDVASRTGSEALARLCERLRE-HSLHGDEF 466
C F + +S ++ EI V+S + E +L E S+H F
Sbjct: 522 CNFAILQSDPKTSLYEIPAVSSSSFFEEFGKLLREADEMDSIHDVTF 568
Score = 37 (18.1 bits), Expect = 2.2e-09, Sum P(3) = 2.2e-09
Identities = 8/22 (36%), Positives = 11/22 (50%)
Query: 398 VRKLAAGGGHSAVLADACSLKE 419
++K+ GGH D LKE
Sbjct: 379 LKKVLVSGGHMEYKVDPEHLKE 400
>UNIPROTKB|B4DFC0 [details] [associations]
symbol:SERGEF "Secretion-regulating guanine nucleotide
exchange factor" species:9606 "Homo sapiens" [GO:0050709 "negative
regulation of protein secretion" evidence=IEA] InterPro:IPR027048
INTERPRO:IPR000408 Pfam:PF00415 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS50012
PANTHER:PTHR22870:SF7 UniGene:Hs.32470 HGNC:HGNC:17499
EMBL:AC055860 EMBL:AC124058 EMBL:AC124078 EMBL:AK294022
IPI:IPI00977685 SMR:B4DFC0 STRING:B4DFC0 Ensembl:ENST00000532265
UCSC:uc010rcz.1 Uniprot:B4DFC0
Length = 174
Score = 144 (55.7 bits), Expect = 3.4e-09, P = 3.4e-09
Identities = 55/181 (30%), Positives = 84/181 (46%)
Query: 182 LSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPEL--EKITQVSCGEYH 239
L+E G + + G N +GQLG GPR + +A EL EK+ ++ G H
Sbjct: 2 LTENGQVLSCGSNSFGQLGVP------HGPRRC-----VVPQAIELHKEKVVCIAAGLRH 50
Query: 240 SAAVSENGEVYTWGLGSVGQLGH--CSLQS-----GDKELLPRRVVALDGIFIKDVACGG 292
+ A + +G V+ WG G + G C Q+ KE P RV L+ V G
Sbjct: 51 AVAATASGIVFQWGTG-LASCGRRLCPGQTLPLFFTAKE--PSRVTGLENSKAMCVLAGS 107
Query: 293 VHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTY-FRNIPILVVPNG-VQLV 350
HS +LT G +Y WG ++ GQL +F +P + + + F+N + + +G LV
Sbjct: 108 DHSASLTDAGEVYVWGSNKHGQLA---NEAAFLPVPQKIEAHCFQNEKVTAIWSGWTHLV 164
Query: 351 A 351
A
Sbjct: 165 A 165
Score = 117 (46.2 bits), Expect = 4.2e-05, P = 4.2e-05
Identities = 41/151 (27%), Positives = 65/151 (43%)
Query: 243 VSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKG 302
++ENG+V + G S GQLG + G + + + + L + +A G H+ A T+ G
Sbjct: 2 LTENGQVLSCGSNSFGQLG---VPHGPRRCVVPQAIELHKEKVVCIAAGLRHAVAATASG 58
Query: 303 ALYAWGGSQA--GQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQL-VACGHSHTLV 359
++ WG A G+ QT E + + N + V G H+
Sbjct: 59 IVFQWGTGLASCGRRLCPGQTLPLFFTAKEPSR------VTGLENSKAMCVLAGSDHSAS 112
Query: 360 YMRDGRIHGWGYNSYGQAANEKSTYAWYPSP 390
G ++ WG N +GQ ANE A+ P P
Sbjct: 113 LTDAGEVYVWGSNKHGQLANEA---AFLPVP 140
>UNIPROTKB|E9PR50 [details] [associations]
symbol:SERGEF "Secretion-regulating guanine nucleotide
exchange factor" species:9606 "Homo sapiens" [GO:0050709 "negative
regulation of protein secretion" evidence=IEA] InterPro:IPR027048
INTERPRO:IPR000408 Pfam:PF00415 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS50012
PANTHER:PTHR22870:SF7 HGNC:HGNC:17499 EMBL:AC055860 EMBL:AC124058
EMBL:AC124078 IPI:IPI00983666 ProteinModelPortal:E9PR50 SMR:E9PR50
Ensembl:ENST00000530613 ArrayExpress:E9PR50 Bgee:E9PR50
Uniprot:E9PR50
Length = 165
Score = 144 (55.7 bits), Expect = 3.4e-09, P = 3.4e-09
Identities = 55/181 (30%), Positives = 84/181 (46%)
Query: 182 LSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPEL--EKITQVSCGEYH 239
L+E G + + G N +GQLG GPR + +A EL EK+ ++ G H
Sbjct: 2 LTENGQVLSCGSNSFGQLGVP------HGPRRC-----VVPQAIELHKEKVVCIAAGLRH 50
Query: 240 SAAVSENGEVYTWGLGSVGQLGH--CSLQS-----GDKELLPRRVVALDGIFIKDVACGG 292
+ A + +G V+ WG G + G C Q+ KE P RV L+ V G
Sbjct: 51 AVAATASGIVFQWGTG-LASCGRRLCPGQTLPLFFTAKE--PSRVTGLENSKAMCVLAGS 107
Query: 293 VHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTY-FRNIPILVVPNG-VQLV 350
HS +LT G +Y WG ++ GQL +F +P + + + F+N + + +G LV
Sbjct: 108 DHSASLTDAGEVYVWGSNKHGQLA---NEAAFLPVPQKIEAHCFQNEKVTAIWSGWTHLV 164
Query: 351 A 351
A
Sbjct: 165 A 165
Score = 117 (46.2 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 41/151 (27%), Positives = 65/151 (43%)
Query: 243 VSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKG 302
++ENG+V + G S GQLG + G + + + + L + +A G H+ A T+ G
Sbjct: 2 LTENGQVLSCGSNSFGQLG---VPHGPRRCVVPQAIELHKEKVVCIAAGLRHAVAATASG 58
Query: 303 ALYAWGGSQA--GQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQL-VACGHSHTLV 359
++ WG A G+ QT E + + N + V G H+
Sbjct: 59 IVFQWGTGLASCGRRLCPGQTLPLFFTAKEPSR------VTGLENSKAMCVLAGSDHSAS 112
Query: 360 YMRDGRIHGWGYNSYGQAANEKSTYAWYPSP 390
G ++ WG N +GQ ANE A+ P P
Sbjct: 113 LTDAGEVYVWGSNKHGQLANEA---AFLPVP 140
>RGD|1311697 [details] [associations]
symbol:Ibtk "inhibitor of Bruton agammaglobulinemia tyrosine
kinase" species:10116 "Rattus norvegicus" [GO:0001933 "negative
regulation of protein phosphorylation" evidence=ISO] [GO:0005634
"nucleus" evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO]
[GO:0019901 "protein kinase binding" evidence=ISO] [GO:0030292
"protein tyrosine kinase inhibitor activity" evidence=ISO]
[GO:0051209 "release of sequestered calcium ion into cytosol"
evidence=ISO] [GO:0061099 "negative regulation of protein tyrosine
kinase activity" evidence=ISO] [GO:0005730 "nucleolus"
evidence=ISO] InterPro:IPR002110 InterPro:IPR000210
InterPro:IPR013069 Pfam:PF00651 PROSITE:PS50088 PROSITE:PS50097
SMART:SM00225 SMART:SM00248 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005634 GO:GO:0005737 GO:GO:0051209 Gene3D:1.25.40.20
InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403 PROSITE:PS50297
Gene3D:3.30.710.10 InterPro:IPR011333 SUPFAM:SSF54695
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS50012 GO:GO:0030292 OrthoDB:EOG4J6RQ1
GeneTree:ENSGT00700000104160 IPI:IPI00370548
Ensembl:ENSRNOT00000056930 ArrayExpress:D3ZH46 Uniprot:D3ZH46
Length = 1352
Score = 141 (54.7 bits), Expect = 6.3e-09, Sum P(2) = 6.3e-09
Identities = 37/103 (35%), Positives = 55/103 (53%)
Query: 230 ITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKE--LLPRRVVALDGIFIKD 287
+ QV ++HS +S+ G+VYT G G G+LGH GD++ L+PR V L G
Sbjct: 179 VKQVVLCKFHSVFLSQQGQVYTCGHGRGGRLGH-----GDEQTCLVPRLVEGLSGHSCSQ 233
Query: 288 VACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNE 330
VA H+ LT G +Y +G + QLG+ P S + +P +
Sbjct: 234 VAAAKDHTVVLTEDGCVYTFGLNTFHQLGIIPPPSSCN-VPRQ 275
Score = 119 (46.9 bits), Expect = 1.5e-06, Sum P(2) = 1.5e-06
Identities = 41/130 (31%), Positives = 62/130 (47%)
Query: 248 EVYTWGLGSVGQLGHCSLQSGDK-ELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYA 306
EVYTWG + LGH S S ELL + + +++K V HS L+ +G +Y
Sbjct: 143 EVYTWGDNTNFTLGHGSQNSKHHPELLD--LFSRSRVYVKQVVLCKFHSVFLSQQGQVYT 200
Query: 307 WGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRI 366
G + G+LG G + L+P R + L + Q VA HT+V DG +
Sbjct: 201 CGHGRGGRLGHGDEQTC--LVP-------RLVEGLSGHSCSQ-VAAAKDHTVVLTEDGCV 250
Query: 367 HGWGYNSYGQ 376
+ +G N++ Q
Sbjct: 251 YTFGLNTFHQ 260
Score = 99 (39.9 bits), Expect = 0.00020, Sum P(2) = 0.00020
Identities = 33/115 (28%), Positives = 55/115 (47%)
Query: 148 GQNQGSNFPRLFWGAFTPNTI-ICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCE 206
G + P L F+ + + + QV H V LS+ G + G+ G+LG G
Sbjct: 158 GSQNSKHHPELL-DLFSRSRVYVKQVVLCKFHSVFLSQQGQVYTCGHGRGGRLGHGDEQT 216
Query: 207 GLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLG 261
L PR+++G + +QV+ + H+ ++E+G VYT+GL + QLG
Sbjct: 217 CLV-PRLVEGLSG--------HSCSQVAAAKDHTVVLTEDGCVYTFGLNTFHQLG 262
Score = 99 (39.9 bits), Expect = 0.00020, Sum P(2) = 0.00020
Identities = 38/133 (28%), Positives = 55/133 (41%)
Query: 73 HTAAVASDGT-LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSE--FVKSIS-CGAHCTAA 128
H +D T ++TWG N LG G++ + HPE + +VK + C H
Sbjct: 133 HVVFKNTDPTEVYTWGDNTNFTLGHGSQNSKHHPELLDLFSRSRVYVKQVVLCKFHSVFL 192
Query: 129 IAEPREND-GTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGL 187
+ + G RL G Q PRL G + QV+ H V L+E G
Sbjct: 193 SQQGQVYTCGHGRGGRLG-HGDEQTCLVPRLVEGLSGHSC--SQVAAAKDHTVVLTEDGC 249
Query: 188 LQAWGYNEYGQLG 200
+ +G N + QLG
Sbjct: 250 VYTFGLNTFHQLG 262
Score = 79 (32.9 bits), Expect = 6.3e-09, Sum P(2) = 6.3e-09
Identities = 17/37 (45%), Positives = 24/37 (64%)
Query: 417 LKELCEFRLAESVTLSNASEIEDVASRTGSEALARLC 453
LKE+CE LAE++TL NA+ + + AS +E L C
Sbjct: 860 LKEMCEVALAENLTLKNAAMLLEFASMYNAEQLKLSC 896
Score = 37 (18.1 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 13/47 (27%), Positives = 20/47 (42%)
Query: 421 CEFRLAESVTLSNASEIEDVASRTGSEALARLCERLRE-HSLHGDEF 466
C F + +S ++ EI V+S + E +L E S H F
Sbjct: 523 CNFAILQSDPKTSLYEIPVVSSSSFFEEFGKLLRETDEMDSFHDVTF 569
>UNIPROTKB|E9PS70 [details] [associations]
symbol:SERGEF "Secretion-regulating guanine nucleotide
exchange factor" species:9606 "Homo sapiens" [GO:0050709 "negative
regulation of protein secretion" evidence=IEA] InterPro:IPR027048
INTERPRO:IPR000408 Pfam:PF00415 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS50012
PANTHER:PTHR22870:SF7 HGNC:HGNC:17499 EMBL:AC055860 EMBL:AC124058
EMBL:AC124078 IPI:IPI00985461 ProteinModelPortal:E9PS70 SMR:E9PS70
Ensembl:ENST00000532389 ArrayExpress:E9PS70 Bgee:E9PS70
Uniprot:E9PS70
Length = 137
Score = 133 (51.9 bits), Expect = 5.3e-08, P = 5.3e-08
Identities = 47/143 (32%), Positives = 67/143 (46%)
Query: 182 LSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPEL--EKITQVSCGEYH 239
L+E G + + G N +GQLG GPR + +A EL EK+ ++ G H
Sbjct: 2 LTENGQVLSCGSNSFGQLGVP------HGPRRC-----VVPQAIELHKEKVVCIAAGLRH 50
Query: 240 SAAVSENGEVYTWGLGSVGQLGH--CSLQS-----GDKELLPRRVVALDGIFIKDVACGG 292
+ A + +G V+ WG G + G C Q+ KE P RV L+ V G
Sbjct: 51 AVAATASGIVFQWGTG-LASCGRRLCPGQTLPLFFTAKE--PSRVTGLENSKAMCVLAGS 107
Query: 293 VHSCALTSKGALYAWGGSQAGQL 315
HS +LT G +Y WG ++ GQL
Sbjct: 108 DHSASLTDAGEVYVWGSNKHGQL 130
Score = 115 (45.5 bits), Expect = 4.6e-06, P = 4.6e-06
Identities = 38/141 (26%), Positives = 61/141 (43%)
Query: 243 VSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKG 302
++ENG+V + G S GQLG + G + + + + L + +A G H+ A T+ G
Sbjct: 2 LTENGQVLSCGSNSFGQLG---VPHGPRRCVVPQAIELHKEKVVCIAAGLRHAVAATASG 58
Query: 303 ALYAWGGSQA--GQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQL-VACGHSHTLV 359
++ WG A G+ QT E + + N + V G H+
Sbjct: 59 IVFQWGTGLASCGRRLCPGQTLPLFFTAKEPSR------VTGLENSKAMCVLAGSDHSAS 112
Query: 360 YMRDGRIHGWGYNSYGQAANE 380
G ++ WG N +GQ ANE
Sbjct: 113 LTDAGEVYVWGSNKHGQLANE 133
Score = 107 (42.7 bits), Expect = 3.4e-05, P = 3.4e-05
Identities = 29/95 (30%), Positives = 42/95 (44%)
Query: 168 IICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPEL 227
++C ++ G H VA + G++ WG GR + C G P E
Sbjct: 41 VVC-IAAGLRHAVAATASGIVFQWGTG-LASCGRRL-CPGQTLPLFFTAKEPSRVTGLEN 97
Query: 228 EKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGH 262
K V G HSA++++ GEVY WG GQL +
Sbjct: 98 SKAMCVLAGSDHSASLTDAGEVYVWGSNKHGQLAN 132
Score = 100 (40.3 bits), Expect = 0.00019, P = 0.00019
Identities = 42/138 (30%), Positives = 63/138 (45%)
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKH---PEKVKQLQSEFVKSISCGA-HCTAAIAEP 132
+ +G + + G+N FGQLG G + P+ + +L E V I+ G H AA A
Sbjct: 2 LTENGQVLSCGSNSFGQLG--VPHGPRRCVVPQAI-ELHKEKVVCIAAGLRHAVAATASG 58
Query: 133 ---RENDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTI--------ICQVSCGSVHVVA 181
+ G S R GQ P LF+ A P+ + +C V GS H +
Sbjct: 59 IVFQWGTGLASCGRRLCPGQT----LP-LFFTAKEPSRVTGLENSKAMC-VLAGSDHSAS 112
Query: 182 LSECGLLQAWGYNEYGQL 199
L++ G + WG N++GQL
Sbjct: 113 LTDAGEVYVWGSNKHGQL 130
>DICTYBASE|DDB_G0289237 [details] [associations]
symbol:tirA "Toll-Interleukin (TIR) receptor
domain-containing protein" species:44689 "Dictyostelium discoideum"
[GO:0008283 "cell proliferation" evidence=IMP] [GO:0006952 "defense
response" evidence=IMP] [GO:0007165 "signal transduction"
evidence=IEA] InterPro:IPR000157 InterPro:IPR002110 Pfam:PF13676
PROSITE:PS50088 PROSITE:PS50104 SMART:SM00248 InterPro:IPR001357
dictyBase:DDB_G0289237 Pfam:PF00533 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0007165 GO:GO:0006952 GO:GO:0008283 Gene3D:1.25.40.20
InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403 PROSITE:PS50297
GenomeReviews:CM000154_GR GO:GO:0005622 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 EMBL:AAFI02000131
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 SMART:SM00292
SUPFAM:SSF52113 PROSITE:PS50172 SUPFAM:SSF52200 RefSeq:XP_636358.1
ProteinModelPortal:Q54HT1 EnsemblProtists:DDB0232375 GeneID:8627031
KEGG:ddi:DDB_G0289237 eggNOG:NOG261364 InParanoid:Q54HT1
OMA:WRAEITR Uniprot:Q54HT1
Length = 1336
Score = 161 (61.7 bits), Expect = 5.5e-08, P = 5.5e-08
Identities = 59/215 (27%), Positives = 99/215 (46%)
Query: 196 YGQLGRGITCEGLQGPRV-IKGYAKFLDEAPELEKITQV---SCGEYHSAAVSENGEVYT 251
+ Q +G++C + R I G K + +L QV S G HS + ++T
Sbjct: 342 FEQSSKGLSCMITEDNRCYIWGNIKSNQKVEQLADHYQVDYCSVGGSHSVMIKRG--IHT 399
Query: 252 WGLGSVGQLGH------CSLQSGDKELL-----PRRVVALDGIFIKDV---ACGGVHSCA 297
GL GQLG+ C G+ +L+ R + ++ F+K V +CG +
Sbjct: 400 VGLNKFGQLGYKNGNTNCIGGGGNNKLMIENQIQRSISIINQNFLKKVLMVSCGKDFNVL 459
Query: 298 LTSKGALYAWGGSQAGQLGLG--PQTRSFSL-IPNESDTYFRNIPILVVPNGVQLVACGH 354
LT++G +++WG + GQLGLG ++ + + N D Y N + ++CG
Sbjct: 460 LTNEGQVFSWGKNDQGQLGLGNSDSKENYEIKLVNFDDPYDSNSNKFI-----SFISCGG 514
Query: 355 SHTLVY----MRDG--RIHGWGYNSYGQAANEKST 383
+H++ DG R++GWG NS GQ + S+
Sbjct: 515 NHSIAIESNSSTDGNCRLYGWGSNSQGQIGEKYSS 549
Score = 153 (58.9 bits), Expect = 4.1e-07, P = 4.1e-07
Identities = 60/196 (30%), Positives = 91/196 (46%)
Query: 142 SRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLG- 200
+R ++WG N SN ++ A C V G H V + G+ G N++GQLG
Sbjct: 357 NRCYIWG-NIKSN-QKVEQLADHYQVDYCSV--GGSHSVMIKR-GI-HTVGLNKFGQLGY 410
Query: 201 -RGIT-CEGLQGPR--VIKGYAK---FLDEAPELEKITQVSCGEYHSAAVSENGEVYTWG 253
G T C G G +I+ + + L+K+ VSCG+ + ++ G+V++WG
Sbjct: 411 KNGNTNCIGGGGNNKLMIENQIQRSISIINQNFLKKVLMVSCGKDFNVLLTNEGQVFSWG 470
Query: 254 LGSVGQLGHCSLQSGDKELLPRRVVALD-------GIFIKDVACGGVHSCALTSKGA--- 303
GQLG + S KE ++V D FI ++CGG HS A+ S +
Sbjct: 471 KNDQGQLGLGN--SDSKENYEIKLVNFDDPYDSNSNKFISFISCGGNHSIAIESNSSTDG 528
Query: 304 ---LYAWGGSQAGQLG 316
LY WG + GQ+G
Sbjct: 529 NCRLYGWGSNSQGQIG 544
Score = 138 (53.6 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 43/155 (27%), Positives = 70/155 (45%)
Query: 16 NIPAKSAIYVWGYNHSGQTGRK---------GRERQLRIPKQLPPELFGCPAGANSRWLD 66
++ K I+ G N GQ G K G +L I Q+ + + L
Sbjct: 390 SVMIKRGIHTVGLNKFGQLGYKNGNTNCIGGGGNNKLMIENQIQRSISIINQNFLKKVLM 449
Query: 67 IACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPE-KVKQLQ-------SEFVKS 118
++CG + + ++G +F+WG N+ GQLG G + +++ E K+ ++F+
Sbjct: 450 VSCGKDFNVLLTNEGQVFSWGKNDQGQLGLGNSDSKENYEIKLVNFDDPYDSNSNKFISF 509
Query: 119 ISCGAHCTAAIAEPRENDGTISTSRLWVWGQN-QG 152
ISCG + + AI DG RL+ WG N QG
Sbjct: 510 ISCGGNHSIAIESNSSTDGNC---RLYGWGSNSQG 541
>WB|WBGene00012370 [details] [associations]
symbol:W09G3.7 species:6239 "Caenorhabditis elegans"
[GO:0045132 "meiotic chromosome segregation" evidence=IMP]
INTERPRO:IPR000408 Pfam:PF00415 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0045132 PRINTS:PR00633
PROSITE:PS50012 EMBL:AL032625 GeneTree:ENSGT00700000104312
EMBL:Z82080 EMBL:AL023854 RefSeq:NP_001021671.2
ProteinModelPortal:G5EEZ1 SMR:G5EEZ1 PRIDE:G5EEZ1
EnsemblMetazoa:W09G3.7a GeneID:173245 KEGG:cel:CELE_W09G3.7
CTD:173245 WormBase:W09G3.7a OMA:RKKVDCA NextBio:878861
Uniprot:G5EEZ1
Length = 404
Score = 150 (57.9 bits), Expect = 1.5e-07, P = 1.5e-07
Identities = 59/190 (31%), Positives = 79/190 (41%)
Query: 226 ELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVA--LDGI 283
E KI +VS A SENGE++ WG GQ + + +L R VA L I
Sbjct: 231 EGSKIQKVSGSTDTLLACSENGEIFIWGQTEYGQAAGAT---DEIQLNTSRHVANSLGPI 287
Query: 284 FIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVV 343
D V A S+G ++ WG G LG+GP+ S P + D P L
Sbjct: 288 ICVDSTQSSV--VARNSRGNVFVWG---VGVLGMGPEAESLKT-PTQMDQ-----P-LFD 335
Query: 344 PNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAA 403
V V+ G+S DGR+ WG N Y +P + + G+VRK A
Sbjct: 336 GKMVTSVSAGNSCMSAINEDGRLFIWGENRYSSLGLGHQKRQLFPYQL-FLPGDVRKAAL 394
Query: 404 GGGHSAVLAD 413
G HS L +
Sbjct: 395 GPDHSLFLVN 404
Score = 144 (55.7 bits), Expect = 7.1e-07, P = 7.1e-07
Identities = 82/304 (26%), Positives = 121/304 (39%)
Query: 65 LDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTE--EGRKHPEKVKQLQSEFVKSISC- 121
L+I+ G H+ + G +F G N FGQ G E + E+ L F S
Sbjct: 125 LEISSGRAHSLIRTNLG-VFAIGDNNFGQCGRNPENMDYVVGSEESPLLPLSFPTSEPII 183
Query: 122 GAHCTAAIAEPRENDGTISTSRLWVWGQ--NQGSNF---PRLFWGAFTPNTIICQVSCGS 176
HC+ + ++ G + + L GQ N+ P G + I +VS +
Sbjct: 184 SIHCSMDTSFVVDSSGAVFSFGLNEDGQCGNEAYGIQWEPAKVRGD-VEGSKIQKVSGST 242
Query: 177 VHVVALSECGLLQAWGYNEYGQLGRGITCE-GLQGPRVIKGYAKFLDEAPELEKITQVSC 235
++A SE G + WG EYGQ G T E L R + A L I V
Sbjct: 243 DTLLACSENGEIFIWGQTEYGQAA-GATDEIQLNTSRHV---------ANSLGPIICVDS 292
Query: 236 GEYHSAAVSENGEVYTWGLGSVGQLGHC-SLQSGDKELLPRRVVALDGIFIKDVACGGVH 294
+ A + G V+ WG+G +G SL++ + P DG + V+ G
Sbjct: 293 TQSSVVARNSRGNVFVWGVGVLGMGPEAESLKTPTQMDQP----LFDGKMVTSVSAGNSC 348
Query: 295 SCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGH 354
A+ G L+ WG ++ LGLG Q R L P + L +P V+ A G
Sbjct: 349 MSAINEDGRLFIWGENRYSSLGLGHQKRQ--LFPYQ----------LFLPGDVRKAALGP 396
Query: 355 SHTL 358
H+L
Sbjct: 397 DHSL 400
>WB|WBGene00017190 [details] [associations]
symbol:F07B7.12 species:6239 "Caenorhabditis elegans"
[GO:0016787 "hydrolase activity" evidence=IEA] InterPro:IPR027047
INTERPRO:IPR000408 Pfam:PF00415 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 InterPro:IPR012983 Pfam:PF08005 EMBL:FO081059
GeneTree:ENSGT00390000011403 KO:K10693 PANTHER:PTHR12846
eggNOG:NOG240798 RefSeq:NP_505281.1 ProteinModelPortal:Q965Y9
SMR:Q965Y9 STRING:Q965Y9 PaxDb:Q965Y9 EnsemblMetazoa:F07B7.12
GeneID:184118 KEGG:cel:CELE_F07B7.12 UCSC:F07B7.12 CTD:184118
WormBase:F07B7.12 InParanoid:Q965Y9 OMA:KESRITH NextBio:923582
Uniprot:Q965Y9
Length = 1900
Score = 134 (52.2 bits), Expect = 2.0e-07, Sum P(2) = 2.0e-07
Identities = 51/208 (24%), Positives = 85/208 (40%)
Query: 165 PNTIICQVSCGSVHVVALSECGLLQAWG-YNEYGQLGRG--ITCEGLQGPR--VIKGYAK 219
P +C CG L CGL + G E Q GR + P+ +
Sbjct: 702 PKGTMCH--CGVGESTCL-RCGLCRPCGEVTEPAQPGRAQHVQFSSTAAPQRSTLHPSRV 758
Query: 220 FLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVA 279
L + P K++ VSCG +H+ ++ + V+T+G GQLG S + P++V+
Sbjct: 759 ILSQGPHDVKVSSVSCGNFHTVLLASDRRVFTFGSNCHGQLGVGDTLSKNT---PQQVIL 815
Query: 280 LDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGL-GPQTRSFSLIPNESDTY---F 335
I VA G H+ + G+++ +G GQL + ++ IP + + F
Sbjct: 816 PSDTVIVQVAAGSNHTILRANDGSVFTFGAFGKGQLARPAGEKAGWNAIPEKVSGFGPGF 875
Query: 336 RNIPILVVPNGVQLVACGHSHTLVYMRD 363
+ +G + HSHT + D
Sbjct: 876 NAFAGWIGADGDSSII--HSHTALLSSD 901
Score = 113 (44.8 bits), Expect = 2.6e-06, Sum P(2) = 2.6e-06
Identities = 51/210 (24%), Positives = 88/210 (41%)
Query: 272 LLPRRVVALDG---IFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIP 328
L P RV+ G + + V+CG H+ L S ++ +G + GQLG+G
Sbjct: 753 LHPSRVILSQGPHDVKVSSVSCGNFHTVLLASDRRVFTFGSNCHGQLGVG---------- 802
Query: 329 NESDTYFRNIPILVV-PNGVQLV--ACGHSHTLVYMRDGRIHGWGYNSYGQAAN---EKS 382
DT +N P V+ P+ +V A G +HT++ DG + +G GQ A EK+
Sbjct: 803 ---DTLSKNTPQQVILPSDTVIVQVAAGSNHTILRANDGSVFTFGAFGKGQLARPAGEKA 859
Query: 383 TYAWYPSPVDWCVGEVRKLAAG----GGHSAVLADACSLKELCEFRLAESVTLSNASEIE 438
+ P V G AG G S+++ +L L + ++ ++N + I
Sbjct: 860 GWNAIPEKVSG-FGPGFNAFAGWIGADGDSSIIHSHTAL--LSSDNILKAQIVANKTNIF 916
Query: 439 DVASRTGSEALARLCERLREHSLHGDEFDC 468
G + + + +L H ++ C
Sbjct: 917 IFPREVGKDYIV-IRRKLNVFEHHASDYKC 945
Score = 86 (35.3 bits), Expect = 2.6e-06, Sum P(2) = 2.6e-06
Identities = 24/78 (30%), Positives = 41/78 (52%)
Query: 185 CGLLQAWGY-NEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAV 243
C +GY +E G++ G GL RV ++ L+ + I+ ++ G+ H AV
Sbjct: 575 CASGHVYGYVSENGKIFMG----GLHTMRVNVS-SQMLNGLDNV-MISSLALGKSHGVAV 628
Query: 244 SENGEVYTWGLGSVGQLG 261
+ NG ++TWGL ++ Q G
Sbjct: 629 TRNGHLFTWGLNNMNQCG 646
Score = 75 (31.5 bits), Expect = 2.0e-07, Sum P(2) = 2.0e-07
Identities = 14/29 (48%), Positives = 16/29 (55%)
Query: 67 IACGHEHTAAVASDGTLFTWGANEFGQLG 95
+A G H AV +G LFTWG N Q G
Sbjct: 618 LALGKSHGVAVTRNGHLFTWGLNNMNQCG 646
Score = 70 (29.7 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 16/47 (34%), Positives = 22/47 (46%)
Query: 166 NTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPR 212
N +I ++ G H VA++ G L WG N Q GR + PR
Sbjct: 612 NVMISSLALGKSHGVAVTRNGHLFTWGLNNMNQCGRVESTSTTSSPR 658
Score = 52 (23.4 bits), Expect = 4.5e-05, Sum P(2) = 4.5e-05
Identities = 12/44 (27%), Positives = 20/44 (45%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFG-CPAGANSRWL 65
++ WG N+ Q GR P+ + + CP G ++ WL
Sbjct: 634 LFTWGLNNMNQCGRVESTSTTSSPRHSGRQEYQICPIGEHT-WL 676
>POMBASE|SPAC10F6.04 [details] [associations]
symbol:SPAC10F6.04 "RCC domain protein Ats1 (predicted)"
species:4896 "Schizosaccharomyces pombe" [GO:0003674
"molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0005829
"cytosol" evidence=IDA] [GO:0006400 "tRNA modification"
evidence=ISO] [GO:0007017 "microtubule-based process" evidence=ISO]
PomBase:SPAC10F6.04 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005829
GO:GO:0005634 EMBL:CU329670 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0006400 GO:GO:0007017 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 eggNOG:COG5184
KO:K15462 OrthoDB:EOG4H75MP PIR:T37498 RefSeq:NP_593255.1
ProteinModelPortal:O42645 STRING:O42645 EnsemblFungi:SPAC10F6.04.1
GeneID:2542973 KEGG:spo:SPAC10F6.04 OMA:WIVIEEN NextBio:20804007
Uniprot:O42645
Length = 351
Score = 133 (51.9 bits), Expect = 2.0e-07, Sum P(2) = 2.0e-07
Identities = 46/148 (31%), Positives = 69/148 (46%)
Query: 171 QVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKI 230
++SCG H + L E L A G N GQ G + E L P + Y + E+
Sbjct: 35 KISCGGNHTLLLDEDSQLWACGDNRKGQCGYEVK-EPLYNP-LSPDYLRIFTRVSH-ERW 91
Query: 231 TQVSCGEYHSAAV-SENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGI-FIKDV 288
++CG S V ++ V + G G G+LG + +S + L + LD FI D+
Sbjct: 92 VFLTCGWEFSVIVHADRRRVCSCGEGLSGELGQGN-RSNSQGLREIDIPYLDDKEFIIDI 150
Query: 289 ACGGVHSCALTSKGALYAWGGSQAGQLG 316
+ G H +T++G LY G + GQLG
Sbjct: 151 SAGLRHWICVTNEGNLYGCGDGRKGQLG 178
Score = 105 (42.0 bits), Expect = 0.00027, Sum P(2) = 0.00027
Identities = 63/244 (25%), Positives = 98/244 (40%)
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
L + G+N QLG +E P+ V ++ ++ ISCG + T + E S
Sbjct: 2 LLSLGSNGNFQLGLNNDEDVYSPQIVPFDRA--IEKISCGGNHTLLLDED---------S 50
Query: 143 RLWVWGQNQ----GSNFPRLFWGAFTPN--TIICQVS--------CG-SVHVVALSECGL 187
+LW G N+ G + +P+ I +VS CG V+ ++
Sbjct: 51 QLWACGDNRKGQCGYEVKEPLYNPLSPDYLRIFTRVSHERWVFLTCGWEFSVIVHADRRR 110
Query: 188 LQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENG 247
+ + G G+LG+G QG R I +LD+ E I +S G H V+ G
Sbjct: 111 VCSCGEGLSGELGQGNRSNS-QGLREID--IPYLDDK---EFIIDISAGLRHWICVTNEG 164
Query: 248 EVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAW 307
+Y G G GQLG +++ +K R+ V CG S L G +
Sbjct: 165 NLYGCGDGRKGQLGPVVMKTVNKVSFLGRIEHAQA-----VVCGVQFSAVLQETGHVIVL 219
Query: 308 GGSQ 311
GG +
Sbjct: 220 GGEK 223
Score = 57 (25.1 bits), Expect = 2.0e-07, Sum P(2) = 2.0e-07
Identities = 9/31 (29%), Positives = 19/31 (61%)
Query: 350 VACGHSHTLVYMRDGRIHGWGYNSYGQAANE 380
+A G H ++ + G + +G+N +G A+N+
Sbjct: 285 IASGTEHNILRTKKGSVLIYGWNEHGNASND 315
>CGD|CAL0001436 [details] [associations]
symbol:ATS1 species:5476 "Candida albicans" [GO:0003674
"molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0002098 "tRNA
wobble uridine modification" evidence=IEA] [GO:0000226 "microtubule
cytoskeleton organization" evidence=IEA] [GO:0007117 "budding cell
bud growth" evidence=IEA] INTERPRO:IPR000408 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 EMBL:AACQ01000073 PRINTS:PR00633
PROSITE:PS00626 eggNOG:COG5184 KO:K15462 RefSeq:XP_716156.1
ProteinModelPortal:Q5A364 STRING:Q5A364 GeneID:3642213
KEGG:cal:CaO19.13757 CGD:CAL0062057 Uniprot:Q5A364
Length = 336
Score = 146 (56.5 bits), Expect = 2.9e-07, P = 2.9e-07
Identities = 48/190 (25%), Positives = 83/190 (43%)
Query: 229 KITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDV 288
K +++ G H+ + +NGEV++ G GQ C L G+ + +V D + D+
Sbjct: 44 KPMKIAGGGNHTMVILDNGEVFSCGSNEFGQ---CGLPRGESLGVFHKVPGNDWL---DI 97
Query: 289 ACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQ 348
+CG S + G +Y G G+LGLG +T LI + + F+ I
Sbjct: 98 SCGWEFSILVKRSGEVYVCGRGLKGELGLGKETPESELIYSTTVDGFKEIK--------- 148
Query: 349 LVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHS 408
+C HT++ +G + GWG + GQ + W P + + V + + G +
Sbjct: 149 --SC-MQHTIIQTTNGLV-GWGNSRKGQLGETEDKIMWTPKTLRFGV-VCKDFSLGREFT 203
Query: 409 AVLADACSLK 418
A+ D +K
Sbjct: 204 AIQTDTNRVK 213
>UNIPROTKB|Q5A364 [details] [associations]
symbol:ATS1 "Putative uncharacterized protein ATS1"
species:237561 "Candida albicans SC5314" [GO:0003674
"molecular_function" evidence=ND] INTERPRO:IPR000408
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
EMBL:AACQ01000073 PRINTS:PR00633 PROSITE:PS00626 eggNOG:COG5184
KO:K15462 RefSeq:XP_716156.1 ProteinModelPortal:Q5A364
STRING:Q5A364 GeneID:3642213 KEGG:cal:CaO19.13757 CGD:CAL0062057
Uniprot:Q5A364
Length = 336
Score = 146 (56.5 bits), Expect = 2.9e-07, P = 2.9e-07
Identities = 48/190 (25%), Positives = 83/190 (43%)
Query: 229 KITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDV 288
K +++ G H+ + +NGEV++ G GQ C L G+ + +V D + D+
Sbjct: 44 KPMKIAGGGNHTMVILDNGEVFSCGSNEFGQ---CGLPRGESLGVFHKVPGNDWL---DI 97
Query: 289 ACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQ 348
+CG S + G +Y G G+LGLG +T LI + + F+ I
Sbjct: 98 SCGWEFSILVKRSGEVYVCGRGLKGELGLGKETPESELIYSTTVDGFKEIK--------- 148
Query: 349 LVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHS 408
+C HT++ +G + GWG + GQ + W P + + V + + G +
Sbjct: 149 --SC-MQHTIIQTTNGLV-GWGNSRKGQLGETEDKIMWTPKTLRFGV-VCKDFSLGREFT 203
Query: 409 AVLADACSLK 418
A+ D +K
Sbjct: 204 AIQTDTNRVK 213
>UNIPROTKB|C9J3R0 [details] [associations]
symbol:RCC1 "Regulator of chromosome condensation"
species:9606 "Homo sapiens" [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005634 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626
PROSITE:PS50012 EMBL:AL513497 HGNC:HGNC:1913 HOGENOM:HOG000234341
IPI:IPI00926548 ProteinModelPortal:C9J3R0 SMR:C9J3R0 STRING:C9J3R0
PRIDE:C9J3R0 Ensembl:ENST00000434290 ArrayExpress:C9J3R0
Bgee:C9J3R0 Uniprot:C9J3R0
Length = 273
Score = 143 (55.4 bits), Expect = 3.5e-07, P = 3.5e-07
Identities = 56/222 (25%), Positives = 94/222 (42%)
Query: 183 SECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAA 242
+E GL+ G + GQLG G + P ++ PE + Q G H+
Sbjct: 40 TEPGLVLTLGQGDVGQLGLGENVMERKKPALVS--------IPE--DVVQAEAGGMHTVC 89
Query: 243 VSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKG 302
+S++G+VY++G G LG + G E++P +V + + V+ G H+ ALT G
Sbjct: 90 LSKSGQVYSFGCNDEGALGRDTSVEGS-EMVPGKVELQEKVV--QVSAGDSHTAALTDDG 146
Query: 303 ALYAWGGSQ------AGQLGLGPQT--RSFSLIPNESDT-----YFRNIPILVVPNGVQL 349
++ WG + + +LG G + + S + D + +VP VQL
Sbjct: 147 RVFLWGSFRHCLFHTSQRLGWGKEVWRQGLSHLRVSKDNNGVIGLLEPMKKSMVPVQVQL 206
Query: 350 ------VACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYA 385
VA G+ H ++ DG ++ G GQ +A
Sbjct: 207 DVPVVKVASGNDHLVMLTADGDLYTLGCGEQGQLGRVPELFA 248
Score = 137 (53.3 bits), Expect = 1.7e-06, P = 1.7e-06
Identities = 30/89 (33%), Positives = 51/89 (57%)
Query: 165 PNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEA 224
P ++ Q G +H V LS+ G + ++G N+ G LGR + EG + ++ G +
Sbjct: 74 PEDVV-QAEAGGMHTVCLSKSGQVYSFGCNDEGALGRDTSVEGSE---MVPGKVELQ--- 126
Query: 225 PELEKITQVSCGEYHSAAVSENGEVYTWG 253
EK+ QVS G+ H+AA++++G V+ WG
Sbjct: 127 ---EKVVQVSAGDSHTAALTDDGRVFLWG 152
Score = 130 (50.8 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 48/162 (29%), Positives = 75/162 (46%)
Query: 212 RVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKE 271
R+ K + D P+ +K+ +VS H + +E G V T G G VGQLG G+
Sbjct: 13 RIAKRRSPPADAIPKSKKV-KVS----HRSHSTEPGLVLTLGQGDVGQLG-----LGEN- 61
Query: 272 LLPRRVVALDGIFIKDVA---CGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIP 328
++ R+ AL I +DV GG+H+ L+ G +Y++G + G LG ++P
Sbjct: 62 VMERKKPALVSI-PEDVVQAEAGGMHTVCLSKSGQVYSFGCNDEGALGRDTSVEGSEMVP 120
Query: 329 NESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWG 370
+ + + V V+ G SHT DGR+ WG
Sbjct: 121 GKVE----------LQEKVVQVSAGDSHTAALTDDGRVFLWG 152
Score = 106 (42.4 bits), Expect = 3.3e-05, Sum P(2) = 3.3e-05
Identities = 49/175 (28%), Positives = 77/175 (44%)
Query: 1 MDINEIIGETARPVDNIPAKSAIYVWGYNHSGQTGR-----KGRERQL----RIPKQLPP 51
M I + P D IP + V +HS + G +G QL + ++ P
Sbjct: 9 MSPKRIAKRRSPPADAIPKSKKVKVSHRSHSTEPGLVLTLGQGDVGQLGLGENVMERKKP 68
Query: 52 ELFGCPAGANSRWLDIACGHEHTAAVASDGTLFTWGANEFGQLG-DGTEEGRKH-PEKVK 109
L P + G HT ++ G ++++G N+ G LG D + EG + P KV
Sbjct: 69 ALVSIPEDV----VQAEAGGMHTVCLSKSGQVYSFGCNDEGALGRDTSVEGSEMVPGKV- 123
Query: 110 QLQSEFVKSISCGAHCTAAIAEPRENDGTISTSRLWVWGQNQGSNF---PRLFWG 161
+LQ + V+ +S G TAA+ + DG R+++WG + F RL WG
Sbjct: 124 ELQEKVVQ-VSAGDSHTAALTD----DG-----RVFLWGSFRHCLFHTSQRLGWG 168
Score = 61 (26.5 bits), Expect = 3.3e-05, Sum P(2) = 3.3e-05
Identities = 14/33 (42%), Positives = 20/33 (60%)
Query: 169 ICQVSCGSVHVVALSECGLLQAWGYNEYGQLGR 201
+ +V+ G+ H+V L+ G L G E GQLGR
Sbjct: 210 VVKVASGNDHLVMLTADGDLYTLGCGEQGQLGR 242
>GENEDB_PFALCIPARUM|MAL7P1.38 [details] [associations]
symbol:MAL7P1.38 "regulator of chromosome
condensation protein, putative" species:5833 "Plasmodium
falciparum" [GO:0005634 "nucleus" evidence=ISS] [GO:0003682
"chromatin binding" evidence=ISS] [GO:0030261 "chromosome
condensation" evidence=ISS] [GO:0007049 "cell cycle" evidence=ISS]
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005634 GO:GO:0003682
GO:GO:0007049 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
GO:GO:0030261 PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS50012
EMBL:AL844506 RefSeq:XP_002808773.1 ProteinModelPortal:C0H4M6
EnsemblProtists:MAL7P1.38:mRNA GeneID:2655211 KEGG:pfa:MAL7P1.38
EuPathDB:PlasmoDB:PF3D7_0711500 HOGENOM:HOG000283921
ProtClustDB:CLSZ2431811 Uniprot:C0H4M6
Length = 687
Score = 120 (47.3 bits), Expect = 0.00070, P = 0.00070
Identities = 39/113 (34%), Positives = 57/113 (50%)
Query: 165 PNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEA 224
PN I +V CGS+H + + L ++G N+ G LGR G++ F
Sbjct: 38 PNDID-EVICGSMHTIIKTTDDKLYSFGCNDMGVLGRKTYSSGIKDLEHSPTLINFT--F 94
Query: 225 PELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQS-GDK-ELLPR 275
P KI +++CG+ H+A + ENG+VY G G G L S G+K ELL +
Sbjct: 95 PS--KIKKITCGDNHTAILLENGKVYITG-GFRDYCGVLGLPSFGEKNELLTK 144
Score = 110 (43.8 bits), Expect = 4.3e-07, Sum P(2) = 4.3e-07
Identities = 47/172 (27%), Positives = 74/172 (43%)
Query: 229 KITQVSCGEYHSAAVSENG-EVYTWGLGSVGQLGHCSLQSGDKELLP-RRVVALDGIFIK 286
K + CG ++ EN +VY G+G G C + S D + ++ L I
Sbjct: 263 KFENIYCGGNNTYVQLENSLDVY--GIGR-NAYGSCGVSSKDNIIKKFEKIQELSQKKIN 319
Query: 287 DVACGGVH-SCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPN 345
+ CGG + L + LY WG + LG+ ++S P E D + +N V N
Sbjct: 320 QL-CGGQSFTVCLLNNNDLYIWGNREI--LGMEYDDDAYS--PLELDFFKKNN--YTVKN 372
Query: 346 GVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWY----PSPVDW 393
+ CG H LV +G++ GWG G +E ++ A PS +D+
Sbjct: 373 ----ITCGTDHCLVLTDNGKLFGWGTG--GNEFDENTSLAVIEKNEPSEIDF 418
Score = 103 (41.3 bits), Expect = 2.5e-06, Sum P(2) = 2.5e-06
Identities = 35/140 (25%), Positives = 61/140 (43%)
Query: 172 VSCGSVHVVALSECGL-LQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKI 230
+ CG + E L + G N YG G ++ + +IK + K + E + +KI
Sbjct: 267 IYCGGNNTYVQLENSLDVYGIGRNAYGSCG--VSSKD----NIIKKFEK-IQELSQ-KKI 318
Query: 231 TQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRV--VALDGIFIKDV 288
Q+ G+ + + N ++Y WG + LG ++ D P + + +K++
Sbjct: 319 NQLCGGQSFTVCLLNNNDLYIWGNREI--LG---MEYDDDAYSPLELDFFKKNNYTVKNI 373
Query: 289 ACGGVHSCALTSKGALYAWG 308
CG H LT G L+ WG
Sbjct: 374 TCGTDHCLVLTDNGKLFGWG 393
Score = 87 (35.7 bits), Expect = 4.3e-07, Sum P(2) = 4.3e-07
Identities = 23/71 (32%), Positives = 35/71 (49%)
Query: 66 DIACGHEHTAAVASDGTLFTWGANEFGQLGDGT-EEGRK---H-PEKVKQLQSEFVKSIS 120
++ CG HT +D L+++G N+ G LG T G K H P + +K I+
Sbjct: 43 EVICGSMHTIIKTTDDKLYSFGCNDMGVLGRKTYSSGIKDLEHSPTLINFTFPSKIKKIT 102
Query: 121 CGAHCTAAIAE 131
CG + TA + E
Sbjct: 103 CGDNHTAILLE 113
Score = 72 (30.4 bits), Expect = 1.5e-05, Sum P(2) = 1.5e-05
Identities = 27/97 (27%), Positives = 44/97 (45%)
Query: 2 DINEIIGETARPVDNIPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPEL-FGCPAGA 60
DI+E+I + + +Y +G N G GRK ++ + P + F P
Sbjct: 40 DIDEVICGSMHTIIKT-TDDKLYSFGCNDMGVLGRKTYSSGIKDLEHSPTLINFTFP--- 95
Query: 61 NSRWLDIACGHEHTAAVASDGTLF-TWGANEF-GQLG 95
S+ I CG HTA + +G ++ T G ++ G LG
Sbjct: 96 -SKIKKITCGDNHTAILLENGKVYITGGFRDYCGVLG 131
>UNIPROTKB|C0H4M6 [details] [associations]
symbol:MAL7P1.38 "Regulator of chromosome condensation,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0003682
"chromatin binding" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISS] [GO:0007049 "cell cycle" evidence=ISS] [GO:0030261
"chromosome condensation" evidence=ISS] INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005634 GO:GO:0003682 GO:GO:0007049
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0030261
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS50012 EMBL:AL844506
RefSeq:XP_002808773.1 ProteinModelPortal:C0H4M6
EnsemblProtists:MAL7P1.38:mRNA GeneID:2655211 KEGG:pfa:MAL7P1.38
EuPathDB:PlasmoDB:PF3D7_0711500 HOGENOM:HOG000283921
ProtClustDB:CLSZ2431811 Uniprot:C0H4M6
Length = 687
Score = 120 (47.3 bits), Expect = 0.00070, P = 0.00070
Identities = 39/113 (34%), Positives = 57/113 (50%)
Query: 165 PNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEA 224
PN I +V CGS+H + + L ++G N+ G LGR G++ F
Sbjct: 38 PNDID-EVICGSMHTIIKTTDDKLYSFGCNDMGVLGRKTYSSGIKDLEHSPTLINFT--F 94
Query: 225 PELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQS-GDK-ELLPR 275
P KI +++CG+ H+A + ENG+VY G G G L S G+K ELL +
Sbjct: 95 PS--KIKKITCGDNHTAILLENGKVYITG-GFRDYCGVLGLPSFGEKNELLTK 144
Score = 110 (43.8 bits), Expect = 4.3e-07, Sum P(2) = 4.3e-07
Identities = 47/172 (27%), Positives = 74/172 (43%)
Query: 229 KITQVSCGEYHSAAVSENG-EVYTWGLGSVGQLGHCSLQSGDKELLP-RRVVALDGIFIK 286
K + CG ++ EN +VY G+G G C + S D + ++ L I
Sbjct: 263 KFENIYCGGNNTYVQLENSLDVY--GIGR-NAYGSCGVSSKDNIIKKFEKIQELSQKKIN 319
Query: 287 DVACGGVH-SCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPN 345
+ CGG + L + LY WG + LG+ ++S P E D + +N V N
Sbjct: 320 QL-CGGQSFTVCLLNNNDLYIWGNREI--LGMEYDDDAYS--PLELDFFKKNN--YTVKN 372
Query: 346 GVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWY----PSPVDW 393
+ CG H LV +G++ GWG G +E ++ A PS +D+
Sbjct: 373 ----ITCGTDHCLVLTDNGKLFGWGTG--GNEFDENTSLAVIEKNEPSEIDF 418
Score = 103 (41.3 bits), Expect = 2.5e-06, Sum P(2) = 2.5e-06
Identities = 35/140 (25%), Positives = 61/140 (43%)
Query: 172 VSCGSVHVVALSECGL-LQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKI 230
+ CG + E L + G N YG G ++ + +IK + K + E + +KI
Sbjct: 267 IYCGGNNTYVQLENSLDVYGIGRNAYGSCG--VSSKD----NIIKKFEK-IQELSQ-KKI 318
Query: 231 TQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRV--VALDGIFIKDV 288
Q+ G+ + + N ++Y WG + LG ++ D P + + +K++
Sbjct: 319 NQLCGGQSFTVCLLNNNDLYIWGNREI--LG---MEYDDDAYSPLELDFFKKNNYTVKNI 373
Query: 289 ACGGVHSCALTSKGALYAWG 308
CG H LT G L+ WG
Sbjct: 374 TCGTDHCLVLTDNGKLFGWG 393
Score = 87 (35.7 bits), Expect = 4.3e-07, Sum P(2) = 4.3e-07
Identities = 23/71 (32%), Positives = 35/71 (49%)
Query: 66 DIACGHEHTAAVASDGTLFTWGANEFGQLGDGT-EEGRK---H-PEKVKQLQSEFVKSIS 120
++ CG HT +D L+++G N+ G LG T G K H P + +K I+
Sbjct: 43 EVICGSMHTIIKTTDDKLYSFGCNDMGVLGRKTYSSGIKDLEHSPTLINFTFPSKIKKIT 102
Query: 121 CGAHCTAAIAE 131
CG + TA + E
Sbjct: 103 CGDNHTAILLE 113
Score = 72 (30.4 bits), Expect = 1.5e-05, Sum P(2) = 1.5e-05
Identities = 27/97 (27%), Positives = 44/97 (45%)
Query: 2 DINEIIGETARPVDNIPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPEL-FGCPAGA 60
DI+E+I + + +Y +G N G GRK ++ + P + F P
Sbjct: 40 DIDEVICGSMHTIIKT-TDDKLYSFGCNDMGVLGRKTYSSGIKDLEHSPTLINFTFP--- 95
Query: 61 NSRWLDIACGHEHTAAVASDGTLF-TWGANEF-GQLG 95
S+ I CG HTA + +G ++ T G ++ G LG
Sbjct: 96 -SKIKKITCGDNHTAILLENGKVYITGGFRDYCGVLG 131
>WB|WBGene00004304 [details] [associations]
symbol:ran-3 species:6239 "Caenorhabditis elegans"
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0051301 "cell division" evidence=IMP] [GO:0000910
"cytokinesis" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0000003 "reproduction" evidence=IMP]
[GO:0040035 "hermaphrodite genitalia development" evidence=IMP]
[GO:0007052 "mitotic spindle organization" evidence=IMP]
[GO:0016246 "RNA interference" evidence=IMP] INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005634 GO:GO:0009792 GO:GO:0040010
GO:GO:0007067 GO:GO:0007052 GO:GO:0002119 GO:GO:0016246
GO:GO:0000910 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
GO:GO:0005085 GO:GO:0040035 PRINTS:PR00633 PROSITE:PS00625
PROSITE:PS00626 PROSITE:PS50012 eggNOG:COG5184 EMBL:Z54327
GeneTree:ENSGT00700000104160 PIR:T19483 RefSeq:NP_495753.1
ProteinModelPortal:Q18211 SMR:Q18211 IntAct:Q18211 STRING:Q18211
PaxDb:Q18211 EnsemblMetazoa:C26D10.1.1 EnsemblMetazoa:C26D10.1.2
GeneID:174332 KEGG:cel:CELE_C26D10.1 UCSC:C26D10.1 CTD:174332
WormBase:C26D10.1 HOGENOM:HOG000016067 InParanoid:Q18211
OMA:TEPNDVE NextBio:883582 Uniprot:Q18211
Length = 569
Score = 144 (55.7 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 59/217 (27%), Positives = 93/217 (42%)
Query: 171 QVSCGSVHVVALSECGLLQAWGYNEYGQL-GRGITCEGLQGPRVIKGYAKFLDEAPELEK 229
Q G VH L+ G + G NE G + G+ EG K KF ++ + K
Sbjct: 189 QAVAGGVHSAVLTSEGEVYMCGINEKGTVPAEGVEKEG-STDEFAK--VKFEEDIEKEGK 245
Query: 230 ITQVSCGEYHSAAVSENGEVYTWG--LGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKD 287
I ++ G +AA+++ G V WG S G + L +E P +V I
Sbjct: 246 IVMLAAGASFTAALTDQGSVIAWGNLRNSNGNVDVHPLLHKMQEA-PVVIVHQAKRKIVK 304
Query: 288 VACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSF--SLIPNESDTYFRNIPILVVPN 345
+A G H L KG L +G + GQLG +T++ + +ES + +P+
Sbjct: 305 IAAGENHLVMLDEKGCLLTFGDGEMGQLGRSSRTKTIRSKYMCDESGDHLL-VPLRFKHK 363
Query: 346 G--VQLVA----CGHSHTLVYMRDGRIHGWGYNSYGQ 376
G +VA T+V+ DG+ + +G N+Y Q
Sbjct: 364 GKFFDVVAKNVFASGFWTIVHGEDGKYYAFGLNNYAQ 400
Score = 120 (47.3 bits), Expect = 2.0e-05, Sum P(2) = 2.0e-05
Identities = 62/232 (26%), Positives = 96/232 (41%)
Query: 169 ICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRG---------ITCE--G--LQGPRVIK 215
I +++ G H+V L E G L +G E GQLGR C+ G L P K
Sbjct: 302 IVKIAAGENHLVMLDEKGCLLTFGDGEMGQLGRSSRTKTIRSKYMCDESGDHLLVPLRFK 361
Query: 216 GYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLG----HCSL-QSG-- 268
KF D + V + + E+G+ Y +GL + QLG + Q G
Sbjct: 362 HKGKFFDVVAK-----NVFASGFWTIVHGEDGKYYAFGLNNYAQLGIKVDEADVGQDGQD 416
Query: 269 DKEL---LPRRVVALDGIFIKDVACGGV-HSCALTSKGALYAWGGSQAGQLGLGPQTRSF 324
++EL LP A G V GV H L S G ++A G + LGLG T
Sbjct: 417 NRELRVFLPAEAPAF-GAERTFVNIEGVQHVVILGSDGKVFAMGKNTDNALGLGNWTGK- 474
Query: 325 SLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQ 376
++ + I + + + V+ + ++ + DG + WG+++ GQ
Sbjct: 475 ---DDQQHWLYDTIQEIEFDSKIVGVSAKLATSIAWSEDGTAYAWGFDTTGQ 523
Score = 106 (42.4 bits), Expect = 7.3e-07, Sum P(2) = 7.3e-07
Identities = 46/156 (29%), Positives = 69/156 (44%)
Query: 65 LDIACGHEHTAAVASDGTLFTWGANEFGQL-GDGTEEGRKHPE--KVK---QLQSEF-VK 117
L G H+A + S+G ++ G NE G + +G E+ E KVK ++ E +
Sbjct: 188 LQAVAGGVHSAVLTSEGEVYMCGINEKGTVPAEGVEKEGSTDEFAKVKFEEDIEKEGKIV 247
Query: 118 SISCGAHCTAAIAEPRENDGTISTSRLWVWGQNQGSN-----FPRLFWGAFTPNTIICQ- 171
++ GA TAA+ + G++ WG + SN P L P I+ Q
Sbjct: 248 MLAAGASFTAALTD----QGSVIA-----WGNLRNSNGNVDVHPLLHKMQEAPVVIVHQA 298
Query: 172 ------VSCGSVHVVALSECGLLQAWGYNEYGQLGR 201
++ G H+V L E G L +G E GQLGR
Sbjct: 299 KRKIVKIAAGENHLVMLDEKGCLLTFGDGEMGQLGR 334
Score = 87 (35.7 bits), Expect = 7.3e-07, Sum P(2) = 7.3e-07
Identities = 41/143 (28%), Positives = 60/143 (41%)
Query: 184 ECGLLQAWGYNEYGQLGRGITCEGL-QGPRVIKGYAKFLD-EAPEL-EKITQVSC-GEYH 239
E G A+G N Y QLG + + Q + + FL EAP + T V+ G H
Sbjct: 386 EDGKYYAFGLNNYAQLGIKVDEADVGQDGQDNRELRVFLPAEAPAFGAERTFVNIEGVQH 445
Query: 240 SAAVSENGEVYTWGLGSVGQLGHCSLQSGDKE---LLPR-RVVALDGIFIKDVACGGVHS 295
+ +G+V+ G + LG + D + L + + D + V+ S
Sbjct: 446 VVILGSDGKVFAMGKNTDNALGLGNWTGKDDQQHWLYDTIQEIEFDSKIV-GVSAKLATS 504
Query: 296 CALTSKGALYAWGGSQAGQLGLG 318
A + G YAWG GQLGLG
Sbjct: 505 IAWSEDGTAYAWGFDTTGQLGLG 527
Score = 58 (25.5 bits), Expect = 2.0e-05, Sum P(2) = 2.0e-05
Identities = 15/71 (21%), Positives = 30/71 (42%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
+ ++ +Y+ G N G +G E++ + F + + +A G TAA
Sbjct: 200 LTSEGEVYMCGINEKGTVPAEGVEKE-GSTDEFAKVKFEEDIEKEGKIVMLAAGASFTAA 258
Query: 77 VASDGTLFTWG 87
+ G++ WG
Sbjct: 259 LTDQGSVIAWG 269
>UNIPROTKB|G4NC24 [details] [associations]
symbol:MGG_00456 "BTB domain and ankyrin repeat protein"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR002110 InterPro:IPR000210
InterPro:IPR013069 Pfam:PF00651 PROSITE:PS50097 SMART:SM00225
SMART:SM00248 INTERPRO:IPR000408 EMBL:CM001235 Gene3D:1.25.40.20
InterPro:IPR020683 SUPFAM:SSF48403 PROSITE:PS50297
Gene3D:3.30.710.10 InterPro:IPR011333 SUPFAM:SSF54695
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS50012 RefSeq:XP_003718611.1
ProteinModelPortal:G4NC24 EnsemblFungi:MGG_00456T0 GeneID:2674172
KEGG:mgr:MGG_00456 Uniprot:G4NC24
Length = 1598
Score = 137 (53.3 bits), Expect = 1.4e-06, Sum P(2) = 1.4e-06
Identities = 39/124 (31%), Positives = 65/124 (52%)
Query: 229 KITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKE-----LLPRRVV-ALDG 282
K+TQV G+ H+ AV++ GE++TWG + QLG+ K+ L P++V AL
Sbjct: 377 KVTQVVLGQDHTMAVTDKGELWTWGSNAYSQLGYALPPPAKKDEEPMSLAPKQVFGALKK 436
Query: 283 IFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGL-GPQTRSFSL--IPNESDTYFRNIP 339
+ V+ +HS A T+ +++ WG +GQL L +RS + P + + P
Sbjct: 437 EVVIGVSASAIHSVAHTTN-SVFCWG-KNSGQLALMDADSRSLEVQQTPRKVAASLFSAP 494
Query: 340 ILVV 343
I++V
Sbjct: 495 IVMV 498
Score = 115 (45.5 bits), Expect = 0.00031, Sum P(2) = 0.00031
Identities = 36/113 (31%), Positives = 51/113 (45%)
Query: 169 ICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELE 228
+ QV G H +A+++ G L WG N Y QLG + + + K + A + E
Sbjct: 378 VTQVVLGQDHTMAVTDKGELWTWGSNAYSQLGYALPPPAKKDEEPMSLAPKQVFGALKKE 437
Query: 229 KITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKEL--LPRRVVA 279
+ VS HS A + N V+ WG S GQL S E+ PR+V A
Sbjct: 438 VVIGVSASAIHSVAHTTNS-VFCWGKNS-GQLALMDADSRSLEVQQTPRKVAA 488
Score = 62 (26.9 bits), Expect = 1.4e-06, Sum P(2) = 1.4e-06
Identities = 13/31 (41%), Positives = 22/31 (70%)
Query: 79 SDGT-LFTWGANEFGQLGDGTEEGRKHPEKV 108
+DG LF++G+N+ LG G E R++PE++
Sbjct: 248 TDGDELFSFGSNKNMSLGVGDESDRQYPERL 278
>UNIPROTKB|J3KQ33 [details] [associations]
symbol:ALS2 "Alsin" species:9606 "Homo sapiens" [GO:0001662
"behavioral fear response" evidence=IEA] [GO:0001701 "in utero
embryonic development" evidence=IEA] [GO:0001726 "ruffle"
evidence=IEA] [GO:0001881 "receptor recycling" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005813 "centrosome"
evidence=IEA] [GO:0006979 "response to oxidative stress"
evidence=IEA] [GO:0007409 "axonogenesis" evidence=IEA] [GO:0007528
"neuromuscular junction development" evidence=IEA] [GO:0007626
"locomotory behavior" evidence=IEA] [GO:0008104 "protein
localization" evidence=IEA] [GO:0008219 "cell death" evidence=IEA]
[GO:0014069 "postsynaptic density" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0016050 "vesicle organization"
evidence=IEA] [GO:0016197 "endosomal transport" evidence=IEA]
[GO:0016601 "Rac protein signal transduction" evidence=IEA]
[GO:0030027 "lamellipodium" evidence=IEA] [GO:0030424 "axon"
evidence=IEA] [GO:0030426 "growth cone" evidence=IEA] [GO:0032313
"regulation of Rab GTPase activity" evidence=IEA] [GO:0035249
"synaptic transmission, glutamatergic" evidence=IEA] [GO:0043025
"neuronal cell body" evidence=IEA] [GO:0043231 "intracellular
membrane-bounded organelle" evidence=IEA] INTERPRO:IPR000408
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 EMBL:AC007242
EMBL:AC007279 HGNC:HGNC:443 ChiTaRS:ALS2 PROSITE:PS50012
ProteinModelPortal:J3KQ33 Ensembl:ENST00000409632 Uniprot:J3KQ33
Length = 139
Score = 119 (46.9 bits), Expect = 1.7e-06, P = 1.7e-06
Identities = 31/94 (32%), Positives = 46/94 (48%)
Query: 230 ITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVV---ALDGIFIK 286
+ Q + G H ++E+GEVY++G +SG E+ P + AL G ++
Sbjct: 43 VLQAALGVKHGVLLTEDGEVYSFGT--------LPWRSGPVEICPSSPILENALVGQYVI 94
Query: 287 DVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQ 320
VA G HS A+T G Y WG + AGQ + Q
Sbjct: 95 TVATGSFHSGAVTDNGVAYMWGENSAGQCAVANQ 128
Score = 104 (41.7 bits), Expect = 7.1e-05, P = 7.1e-05
Identities = 39/131 (29%), Positives = 58/131 (44%)
Query: 134 ENDGTISTSRLWVWGQNQGSNFP----RL-FWGAFTPNTIICQVSCGSVHVVALSECGLL 188
E +G+ + +W Q +FP RL WG T + Q + G H V L+E G +
Sbjct: 10 EAEGSKERGLVHIW---QAGSFPITPERLPGWGGKT----VLQAALGVKHGVLLTEDGEV 62
Query: 189 QAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGE 248
++G T GP I + L+ A + + V+ G +HS AV++NG
Sbjct: 63 YSFG-----------TLPWRSGPVEICPSSPILENALVGQYVITVATGSFHSGAVTDNGV 111
Query: 249 VYTWGLGSVGQ 259
Y WG S GQ
Sbjct: 112 AYMWGENSAGQ 122
>CGD|CAL0000172 [details] [associations]
symbol:orf19.7574 species:5476 "Candida albicans" [GO:0003674
"molecular_function" evidence=ND] [GO:0000151 "ubiquitin ligase
complex" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR002110 InterPro:IPR000210
InterPro:IPR013069 Pfam:PF00651 PROSITE:PS50097 SMART:SM00225
SMART:SM00248 CGD:CAL0000172 INTERPRO:IPR000408 Gene3D:1.25.40.20
InterPro:IPR020683 SUPFAM:SSF48403 Gene3D:3.30.710.10
InterPro:IPR011333 SUPFAM:SSF54695 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 EMBL:AACQ01000032
PROSITE:PS50012 eggNOG:COG5184 RefSeq:XP_719336.1
ProteinModelPortal:Q5ACR8 GeneID:3638930 KEGG:cal:CaO19.7574
HOGENOM:HOG000094547 Uniprot:Q5ACR8
Length = 1439
Score = 146 (56.5 bits), Expect = 2.6e-06, P = 2.6e-06
Identities = 46/162 (28%), Positives = 76/162 (46%)
Query: 188 LQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKF-------LDEAPELEKITQVSCGEYHS 240
+ +G N QLG G + + + KF + E + + +++ + HS
Sbjct: 182 IYVFGCNSNNQLGVGDSTDRATPALLYHDNFKFATDLTGSISERFKRPRYKRITISKNHS 241
Query: 241 AAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTS 300
V+++GE+++ G+GS G+LGH L + +R+ + IKDVA HS ALT+
Sbjct: 242 VVVTQDGELFSCGVGSRGRLGH-GLTDLNNYFKFKRIEFFNDKTIKDVAISSNHSIALTT 300
Query: 301 KGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILV 342
+YAWG + QLG+ S N D + PI+V
Sbjct: 301 DNEVYAWGLNSFNQLGVPNMNNKKST--NYLDKFIAT-PIMV 339
>UNIPROTKB|Q5ACR8 [details] [associations]
symbol:CaO19.7574 "Potential ankyrin repeat protein"
species:237561 "Candida albicans SC5314" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR002110 InterPro:IPR000210
InterPro:IPR013069 Pfam:PF00651 PROSITE:PS50097 SMART:SM00225
SMART:SM00248 CGD:CAL0000172 INTERPRO:IPR000408 Gene3D:1.25.40.20
InterPro:IPR020683 SUPFAM:SSF48403 Gene3D:3.30.710.10
InterPro:IPR011333 SUPFAM:SSF54695 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 EMBL:AACQ01000032
PROSITE:PS50012 eggNOG:COG5184 RefSeq:XP_719336.1
ProteinModelPortal:Q5ACR8 GeneID:3638930 KEGG:cal:CaO19.7574
HOGENOM:HOG000094547 Uniprot:Q5ACR8
Length = 1439
Score = 146 (56.5 bits), Expect = 2.6e-06, P = 2.6e-06
Identities = 46/162 (28%), Positives = 76/162 (46%)
Query: 188 LQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKF-------LDEAPELEKITQVSCGEYHS 240
+ +G N QLG G + + + KF + E + + +++ + HS
Sbjct: 182 IYVFGCNSNNQLGVGDSTDRATPALLYHDNFKFATDLTGSISERFKRPRYKRITISKNHS 241
Query: 241 AAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTS 300
V+++GE+++ G+GS G+LGH L + +R+ + IKDVA HS ALT+
Sbjct: 242 VVVTQDGELFSCGVGSRGRLGH-GLTDLNNYFKFKRIEFFNDKTIKDVAISSNHSIALTT 300
Query: 301 KGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILV 342
+YAWG + QLG+ S N D + PI+V
Sbjct: 301 DNEVYAWGLNSFNQLGVPNMNNKKST--NYLDKFIAT-PIMV 339
>ASPGD|ASPL0000075377 [details] [associations]
symbol:AN10609 species:162425 "Emericella nidulans"
[GO:0003674 "molecular_function" evidence=ND] [GO:0034551
"mitochondrial respiratory chain complex III assembly"
evidence=IEA] [GO:0031305 "integral to mitochondrial inner
membrane" evidence=IEA] INTERPRO:IPR000408 Pfam:PF00415
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 EMBL:BN001303
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012
EnsemblFungi:CADANIAT00005518 HOGENOM:HOG000197481 OMA:QRIECGR
Uniprot:C8V9T3
Length = 575
Score = 141 (54.7 bits), Expect = 4.7e-06, Sum P(2) = 4.7e-06
Identities = 63/249 (25%), Positives = 105/249 (42%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWL-DIACGHEHTAAVASDG 81
+Y+WG N + +E ++ P++L F +S L D+ G AA+ +G
Sbjct: 111 LYIWGNNKYRVVDPESKESVIKTPRRL--SYF------DSNVLRDLKLGETSGAAIIENG 162
Query: 82 TLFTWGA--NEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTI 139
L WG +E T G K+ + V S G + +++ + G
Sbjct: 163 DLVQWGKGYSETEFKPTKTLTG-KNLISLSMSHDRIVALSSDGKVYSLPVSKHDQTSGKK 221
Query: 140 STSRLWV-WGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECG-LLQAWGYNE-- 195
+ + W+ + + S RL I +S G HV+ L+ G + A E
Sbjct: 222 AEEKSWLPFSSGKSSMSYRLIQPILKLGEKIVAISGGLEHVLLLTSSGRVFSAVSSTENF 281
Query: 196 --YGQLG-RGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTW 252
+GQLG G+T + P + A + P K+ Q++ G+YHS +++NG V +
Sbjct: 282 PSFGQLGVPGLTW-ATRPPGPVD--APHEVKTPNGVKVAQIATGDYHSLLLTKNGNVLAF 338
Query: 253 GLGSVGQLG 261
G S GQLG
Sbjct: 339 GDNSFGQLG 347
Score = 133 (51.9 bits), Expect = 3.5e-05, Sum P(2) = 3.5e-05
Identities = 66/259 (25%), Positives = 107/259 (41%)
Query: 75 AAVASDGTLFTWGANEFGQLGDGTEEGR-KHPEKVKQLQSEFVKSISCGAHCTAAIAEPR 133
A++ S G L+ WG N++ + ++E K P ++ S ++ + G AAI E
Sbjct: 104 ASLKSPG-LYIWGNNKYRVVDPESKESVIKTPRRLSYFDSNVLRDLKLGETSGAAIIE-- 160
Query: 134 ENDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGY 193
N + W G ++ P T +I +S +VALS G + +
Sbjct: 161 -NGDLVQ----WGKGYSETEFKPTK---TLTGKNLI-SLSMSHDRIVALSSDGKVYSLPV 211
Query: 194 NEYGQLGRGITCEGLQGPRVIKGYA----KFLDEAPEL-EKITQVSCGEYHSAAVSENGE 248
+++ Q G E G + + + +L EKI +S G H ++ +G
Sbjct: 212 SKHDQTS-GKKAEEKSWLPFSSGKSSMSYRLIQPILKLGEKIVAISGGLEHVLLLTSSGR 270
Query: 249 VY-----TWGLGSVGQLGHCSLQSGDKEL----LPRRVVALDGIFIKDVACGGVHSCALT 299
V+ T S GQLG L + P V +G+ + +A G HS LT
Sbjct: 271 VFSAVSSTENFPSFGQLGVPGLTWATRPPGPVDAPHEVKTPNGVKVAQIATGDYHSLLLT 330
Query: 300 SKGALYAWGGSQAGQLGLG 318
G + A+G + GQLGLG
Sbjct: 331 KNGNVLAFGDNSFGQLGLG 349
Score = 42 (19.8 bits), Expect = 4.7e-06, Sum P(2) = 4.7e-06
Identities = 7/15 (46%), Positives = 11/15 (73%)
Query: 307 WGGSQAGQLGLGPQT 321
WGG++ QLG G ++
Sbjct: 500 WGGNEHFQLGTGKRS 514
>UNIPROTKB|G4NDH5 [details] [associations]
symbol:MGG_00913 "Uncharacterized protein" species:242507
"Magnaporthe oryzae 70-15" [GO:0005575 "cellular_component"
evidence=ND] INTERPRO:IPR000408 EMBL:CM001235 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PROSITE:PS00626 PROSITE:PS50012
RefSeq:XP_003718048.1 ProteinModelPortal:G4NDH5
EnsemblFungi:MGG_00913T0 GeneID:2674805 KEGG:mgr:MGG_00913
Uniprot:G4NDH5
Length = 578
Score = 142 (55.0 bits), Expect = 4.7e-06, Sum P(2) = 4.7e-06
Identities = 85/329 (25%), Positives = 135/329 (41%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+Y WG N E+ ++ P ++P F G R D+ AV +G
Sbjct: 114 VYAWGSNSGKVVAPDSDEQIIKTPTRIP--YFD---GKILR--DLKLDKNFGVAVTEEGD 166
Query: 83 LFTWGANEFGQLGDGTEEGR-KHPEKVKQLQSEFVKSIS-CGAHCTAAIAEPRENDGTIS 140
+ WG T R K KV L S+ + ++S GA + +A+ + G +
Sbjct: 167 IVQWGTAYSPTTTTPTPTLRGKDVAKVA-LSSDRIIALSRSGAVYSLPVAQADQLAGAKA 225
Query: 141 TSR--LWVWGQNQGS-NF-----PRLFWGAFTPNTIICQVSCGSVHVVALSECGLL---- 188
T++ + +W + S N+ P+L WG + + G H + L+ G +
Sbjct: 226 TAKSGISLWTPSSDSINYRELTPPKLGWGEK-----VVDIKSGLDHCLMLTSHGRVFSAA 280
Query: 189 -QAWGYNEYGQLG-RGIT-CEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSE 245
Y GQLG G+T +GP K L A ++Q++ G YHS A+ +
Sbjct: 281 SSTANYPSKGQLGIPGLTWLTRPKGPFDQPHEVKGLPPAG----VSQIAAGNYHSLALDK 336
Query: 246 NGEVYTWGLGSVGQLG-HCSLQS---GDKELLP-RRVVALDGIF---IKDVACGGVHSCA 297
N ++ WG S GQLG + QS + +P R++ G+ I +A GG +S
Sbjct: 337 NSNLHAWGDNSSGQLGFEVNPQSPTIDTPKAVPLTRLLTSGGVQRSEITSIAAGGSNSFF 396
Query: 298 LTS------KGALYAW--GGSQAGQLGLG 318
TS + AW G G+LG G
Sbjct: 397 TTSSIPANGRPTAEAWSCGAGLQGELGNG 425
Score = 41 (19.5 bits), Expect = 4.7e-06, Sum P(2) = 4.7e-06
Identities = 7/12 (58%), Positives = 9/12 (75%)
Query: 307 WGGSQAGQLGLG 318
WGG++ QLG G
Sbjct: 495 WGGNEFYQLGTG 506
>ASPGD|ASPL0000042168 [details] [associations]
symbol:AN2073 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0000151
"ubiquitin ligase complex" evidence=IEA] [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR002110
InterPro:IPR000210 InterPro:IPR013069 Pfam:PF00651 PROSITE:PS50097
SMART:SM00225 SMART:SM00248 INTERPRO:IPR000408 EMBL:BN001307
Gene3D:1.25.40.20 InterPro:IPR020683 SUPFAM:SSF48403
PROSITE:PS50297 Gene3D:3.30.710.10 InterPro:IPR011333
SUPFAM:SSF54695 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 EMBL:AACD01000032 PRINTS:PR00633 PROSITE:PS50012
eggNOG:COG5184 OrthoDB:EOG42VCR5 RefSeq:XP_659677.1
ProteinModelPortal:Q5BBK7 EnsemblFungi:CADANIAT00008743
GeneID:2875213 KEGG:ani:AN2073.2 HOGENOM:HOG000182979 OMA:DRLSQIC
Uniprot:Q5BBK7
Length = 1680
Score = 141 (54.7 bits), Expect = 0.00021, Sum P(2) = 0.00021
Identities = 55/217 (25%), Positives = 92/217 (42%)
Query: 54 FGCPAG---ANSRWLDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKH---PEK 107
F C G AN + +A G +HT A+ G +F+WG+N+FGQLG G P +
Sbjct: 468 FVCIEGGGLANKKVASVALGQDHTLAITEHGDIFSWGSNKFGQLGYGLPRANNKDDVPVQ 527
Query: 108 V--KQLQSEFVKSISCGAHCTAAIAEPRENDGTISTSRLWVWGQNQGS-----NFPRLFW 160
+ +Q+ + F K + GA +A + STS L+ +G+N+G + R
Sbjct: 528 LSPRQIFNPFKKEVILGAAASAV------HSVVYSTSGLYTFGKNEGQLGLVDSDARSLE 581
Query: 161 GAFTPNTIICQVSCGSVHVVALSECG---LLQ---AWGYNEYGQLGRGITCEGLQGPRVI 214
TP + + + V+ ++ LLQ W + YG E R I
Sbjct: 582 VQTTPRRVGASLFSTPIQSVSATDQATAILLQNHEVWVFAHYGYSRLSFPLE--INSRFI 639
Query: 215 KGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYT 251
+ + +I ++ G A+S +G+V+T
Sbjct: 640 RDSFMATRYDTSINRIVKIRSGGNTICALSSSGDVFT 676
Score = 140 (54.3 bits), Expect = 5.2e-06, Sum P(3) = 5.2e-06
Identities = 42/154 (27%), Positives = 81/154 (52%)
Query: 228 EKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVA--LDGIFI 285
+K+ V+ G+ H+ A++E+G++++WG GQLG+ ++ +K+ +P ++ + F
Sbjct: 479 KKVASVALGQDHTLAITEHGDIFSWGSNKFGQLGYGLPRANNKDDVPVQLSPRQIFNPFK 538
Query: 286 KDVACGG----VHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPIL 341
K+V G VHS ++ G LY +G ++ GQLGL + + SL E T R +
Sbjct: 539 KEVILGAAASAVHSVVYSTSG-LYTFGKNE-GQLGL-VDSDARSL---EVQTTPRRVGAS 592
Query: 342 VVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYG 375
+ +Q V+ T + +++ + W + YG
Sbjct: 593 LFSTPIQSVSATDQATAILLQNHEV--WVFAHYG 624
Score = 61 (26.5 bits), Expect = 5.2e-06, Sum P(3) = 5.2e-06
Identities = 13/43 (30%), Positives = 25/43 (58%)
Query: 66 DIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKV 108
D+A E + +FT+G+N+ LG G ++ R++PE++
Sbjct: 336 DVAEALEKPSTNLFGDEVFTFGSNKNLNLGVGDQDDRQYPERI 378
Score = 37 (18.1 bits), Expect = 5.2e-06, Sum P(3) = 5.2e-06
Identities = 7/14 (50%), Positives = 8/14 (57%)
Query: 378 ANEKSTYAWYPSPV 391
ANE T W +PV
Sbjct: 1253 ANENDTRPWNETPV 1266
>WB|WBGene00004457 [details] [associations]
symbol:rpm-1 species:6239 "Caenorhabditis elegans"
[GO:0005622 "intracellular" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0006915 "apoptotic process" evidence=IMP]
[GO:0050807 "regulation of synapse organization" evidence=IGI;IMP]
[GO:0040011 "locomotion" evidence=IGI] [GO:0043409 "negative
regulation of MAPK cascade" evidence=IGI] [GO:0031647 "regulation
of protein stability" evidence=IMP] [GO:0010171 "body
morphogenesis" evidence=IMP] [GO:0018991 "oviposition"
evidence=IMP] [GO:0030424 "axon" evidence=IDA] [GO:0031594
"neuromuscular junction" evidence=IDA] [GO:0045202 "synapse"
evidence=IDA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IDA] [GO:0031435 "mitogen-activated protein kinase kinase
kinase binding" evidence=IPI] InterPro:IPR001841 InterPro:IPR000315
InterPro:IPR027047 Pfam:PF00643 Pfam:PF13639 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00336 UniPathway:UPA00143
INTERPRO:IPR000408 Pfam:PF00415 Prosite:PS00518 GO:GO:0005634
GO:GO:0018991 GO:GO:0006915 GO:GO:0006355 GO:GO:0046872
GO:GO:0030424 GO:GO:0008270 GO:GO:0031594 GO:GO:0010171
GO:GO:0040011 GO:GO:0006351 GO:GO:0031647 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR008979 SUPFAM:SSF49785 GO:GO:0004842
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 InterPro:IPR004939
PROSITE:PS51284 GO:GO:0043409 InterPro:IPR012983 Pfam:PF08005
GO:GO:0050807 GeneTree:ENSGT00390000011403 KO:K10693
PANTHER:PTHR12846 eggNOG:NOG240798 EMBL:FO080217 PIR:T29165
RefSeq:NP_505267.1 ProteinModelPortal:Q17551 SMR:Q17551
STRING:Q17551 PaxDb:Q17551 EnsemblMetazoa:C01B7.6 GeneID:179259
KEGG:cel:CELE_C01B7.6 UCSC:C01B7.6 CTD:179259 WormBase:C01B7.6
HOGENOM:HOG000016145 InParanoid:Q17551 OMA:LLSILHW NextBio:904596
Uniprot:Q17551
Length = 3766
Score = 134 (52.2 bits), Expect = 1.1e-05, Sum P(3) = 1.1e-05
Identities = 51/208 (24%), Positives = 85/208 (40%)
Query: 165 PNTIICQVSCGSVHVVALSECGLLQAWG-YNEYGQLGRG--ITCEGLQGPR--VIKGYAK 219
P +C CG L CGL + G E Q GR + P+ +
Sbjct: 702 PKGTMCH--CGVGESTCL-RCGLCRPCGEVTEPAQPGRAQHVQFSSTAAPQRSTLHPSRV 758
Query: 220 FLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVA 279
L + P K++ VSCG +H+ ++ + V+T+G GQLG S + P++V+
Sbjct: 759 ILSQGPHDVKVSSVSCGNFHTVLLASDRRVFTFGSNCHGQLGVGDTLSKNT---PQQVIL 815
Query: 280 LDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGL-GPQTRSFSLIPNESDTY---F 335
I VA G H+ + G+++ +G GQL + ++ IP + + F
Sbjct: 816 PSDTVIVQVAAGSNHTILRANDGSVFTFGAFGKGQLARPAGEKAGWNAIPEKVSGFGPGF 875
Query: 336 RNIPILVVPNGVQLVACGHSHTLVYMRD 363
+ +G + HSHT + D
Sbjct: 876 NAFAGWIGADGDSSII--HSHTALLSSD 901
Score = 113 (44.8 bits), Expect = 1.0e-05, Sum P(2) = 1.0e-05
Identities = 51/210 (24%), Positives = 88/210 (41%)
Query: 272 LLPRRVVALDG---IFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIP 328
L P RV+ G + + V+CG H+ L S ++ +G + GQLG+G
Sbjct: 753 LHPSRVILSQGPHDVKVSSVSCGNFHTVLLASDRRVFTFGSNCHGQLGVG---------- 802
Query: 329 NESDTYFRNIPILVV-PNGVQLV--ACGHSHTLVYMRDGRIHGWGYNSYGQAAN---EKS 382
DT +N P V+ P+ +V A G +HT++ DG + +G GQ A EK+
Sbjct: 803 ---DTLSKNTPQQVILPSDTVIVQVAAGSNHTILRANDGSVFTFGAFGKGQLARPAGEKA 859
Query: 383 TYAWYPSPVDWCVGEVRKLAAG----GGHSAVLADACSLKELCEFRLAESVTLSNASEIE 438
+ P V G AG G S+++ +L L + ++ ++N + I
Sbjct: 860 GWNAIPEKVSG-FGPGFNAFAGWIGADGDSSIIHSHTAL--LSSDNILKAQIVANKTNIF 916
Query: 439 DVASRTGSEALARLCERLREHSLHGDEFDC 468
G + + + +L H ++ C
Sbjct: 917 IFPREVGKDYIV-IRRKLNVFEHHASDYKC 945
Score = 86 (35.3 bits), Expect = 1.0e-05, Sum P(2) = 1.0e-05
Identities = 24/78 (30%), Positives = 41/78 (52%)
Query: 185 CGLLQAWGY-NEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAV 243
C +GY +E G++ G GL RV ++ L+ + I+ ++ G+ H AV
Sbjct: 575 CASGHVYGYVSENGKIFMG----GLHTMRVNVS-SQMLNGLDNV-MISSLALGKSHGVAV 628
Query: 244 SENGEVYTWGLGSVGQLG 261
+ NG ++TWGL ++ Q G
Sbjct: 629 TRNGHLFTWGLNNMNQCG 646
Score = 75 (31.5 bits), Expect = 1.1e-05, Sum P(3) = 1.1e-05
Identities = 14/29 (48%), Positives = 16/29 (55%)
Query: 67 IACGHEHTAAVASDGTLFTWGANEFGQLG 95
+A G H AV +G LFTWG N Q G
Sbjct: 618 LALGKSHGVAVTRNGHLFTWGLNNMNQCG 646
Score = 37 (18.1 bits), Expect = 1.1e-05, Sum P(3) = 1.1e-05
Identities = 6/11 (54%), Positives = 8/11 (72%)
Query: 363 DGRIHGWGYNS 373
DG GWGY++
Sbjct: 1059 DGTGGGWGYSA 1069
>ASPGD|ASPL0000040680 [details] [associations]
symbol:AN2874 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] INTERPRO:IPR000408 EMBL:BN001306 EMBL:AACD01000051
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 eggNOG:COG5184
RefSeq:XP_660478.1 ProteinModelPortal:Q5B9A6
EnsemblFungi:CADANIAT00010215 GeneID:2873908 KEGG:ani:AN2874.2
Uniprot:Q5B9A6
Length = 1365
Score = 123 (48.4 bits), Expect = 0.00076, P = 0.00076
Identities = 73/320 (22%), Positives = 126/320 (39%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
IY WG N GQ GR ++P ++ P + + + + G
Sbjct: 958 IYTWGDNSHGQLGRLTNSMTAQMPGEVDFSEVNLPD--YTIFAQVVATRSACFVLTMFGD 1015
Query: 83 LFTWGA-NEFGQLGDGTEE----GRKH-------PEKVKQLQSEFVKSISCGA-HCTAAI 129
++ WG +E + +G + G +H P +++LQ+ VK ++ G+ H A I
Sbjct: 1016 VYGWGTFSEIYEDENGEQHCEPLGFRHQCKCQRTPLHIQELQN--VKRLAAGSDHVLAQI 1073
Query: 130 AEP-RENDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLL 188
+ N + S S++ +GS + +TI + GS A ++
Sbjct: 1074 SILIGGNRASSSASKM------KGSRVRK------RKDTIAAE---GSSTGSATKVRDVV 1118
Query: 189 QAWGYNEYGQLGR-GITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENG 247
++WG + GQLGR P + + ++ + G++HS + E+G
Sbjct: 1119 RSWGAYKRGQLGRTAANIANCLNPLLCDFPGNSSRALKNPDNVSTIGSGKFHSFVIKESG 1178
Query: 248 EVYTWGLGSVGQLGH----CSLQSGDKEL-LPRRVVALDGIFIKDVACGGVH-SCALTSK 301
+ WG Q S+ D ++ P V +L G + GGV S ALT+
Sbjct: 1179 DFLAWGYNKFAQTAFVPPAASVLRRDLKVDKPSTVASLRGQRVH-FPTGGVDFSVALTAG 1237
Query: 302 GALYAWGGSQAGQLGLGPQT 321
G +WG Q G + P T
Sbjct: 1238 GQCLSWGSFQDGVRSI-PDT 1256
Score = 99 (39.9 bits), Expect = 1.5e-05, Sum P(2) = 1.5e-05
Identities = 30/84 (35%), Positives = 44/84 (52%)
Query: 14 VDN-IPA-KSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGH 71
V+N +P+ K ++YV G N +GQ G G ++ KQ P + P + +A G
Sbjct: 895 VENSVPSRKCSVYVLGENGNGQLGM-GNGTPVQY-KQ-PTKNTQLPDV-----VQVAAGG 946
Query: 72 EHTAAVASDGTLFTWGANEFGQLG 95
EH A+ D ++TWG N GQLG
Sbjct: 947 EHCIALTHDNKIYTWGDNSHGQLG 970
Score = 90 (36.7 bits), Expect = 1.5e-05, Sum P(2) = 1.5e-05
Identities = 40/149 (26%), Positives = 68/149 (45%)
Query: 274 PRRVVALDGIFIKDVACGGVH-SCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESD 332
P V +L G + GGV S ALT+ G +WG Q G + P T + S P+ +
Sbjct: 1210 PSTVASLRGQRVH-FPTGGVDFSVALTAGGQCLSWGSFQDGVRSI-PDT-AMSDEPDFNK 1266
Query: 333 TYFRN----IP-ILVVPN----------GVQLVACGHSHTLVYMRDGRIHGWGYNSYGQA 377
R+ IP I+ VP G+++V+ G +HT+ G+ GWG N + +
Sbjct: 1267 VAGRDEGTQIPAIMKVPTFVPGINAHDKGIKMVSAGWTHTIAVTNGGKALGWGSNDHYEI 1326
Query: 378 ANEKSTYAWYPSPVDWCVGEVRKLAAGGG 406
+++ + P++ + +R + A G
Sbjct: 1327 HPDETKHP-INDPMEIPMEGLRVVEAAAG 1354
>UNIPROTKB|H0YE53 [details] [associations]
symbol:SERGEF "Secretion-regulating guanine nucleotide
exchange factor" species:9606 "Homo sapiens" [GO:0050709 "negative
regulation of protein secretion" evidence=IEA] InterPro:IPR027048
INTERPRO:IPR000408 Pfam:PF00415 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS50012
PANTHER:PTHR22870:SF7 HGNC:HGNC:17499 EMBL:AC055860 EMBL:AC124058
EMBL:AC124078 Ensembl:ENST00000533241 Uniprot:H0YE53
Length = 144
Score = 109 (43.4 bits), Expect = 2.0e-05, P = 2.0e-05
Identities = 34/112 (30%), Positives = 47/112 (41%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+YVWG N GQ + L +P+++ F N + I G H A G
Sbjct: 6 VYVWGSNKHGQLANEAAF--LPVPQKIEAHCF-----QNEKVTAIWSGWTHLVAQTETGK 58
Query: 83 LFTWGANEFGQLGDGTE--EGRKHPEKVKQLQ-SEFVKSISCGAHCTAAIAE 131
+FTWG ++GQLG E EG K ++ L S S+ HC E
Sbjct: 59 MFTWGRADYGQLGRKLETYEGWKLEKQDSFLPCSRPPNSMPSSPHCLTGATE 110
Score = 102 (41.0 bits), Expect = 0.00058, P = 0.00058
Identities = 26/78 (33%), Positives = 40/78 (51%)
Query: 184 ECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAV 243
+ G + WG N++GQL L P+ I+ + F +E K+T + G H A
Sbjct: 2 DAGEVYVWGSNKHGQLANEAAF--LPVPQKIEAHC-FQNE-----KVTAIWSGWTHLVAQ 53
Query: 244 SENGEVYTWGLGSVGQLG 261
+E G+++TWG GQLG
Sbjct: 54 TETGKMFTWGRADYGQLG 71
>POMBASE|SPCC330.11 [details] [associations]
symbol:btb1 "BTB/POZ domain protein Btb1" species:4896
"Schizosaccharomyces pombe" [GO:0000151 "ubiquitin ligase complex"
evidence=IPI] [GO:0005515 "protein binding" evidence=IPI]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IC] InterPro:IPR002110 InterPro:IPR000210
InterPro:IPR013069 Pfam:PF00023 Pfam:PF00651 PROSITE:PS50088
PROSITE:PS50097 SMART:SM00225 SMART:SM00248 UniPathway:UPA00143
PomBase:SPCC330.11 INTERPRO:IPR000408 Pfam:PF00415 EMBL:CU329672
GenomeReviews:CU329672_GR Gene3D:1.25.40.20 InterPro:IPR020683
SUPFAM:SSF48403 PROSITE:PS50297 GO:GO:0016567 Gene3D:3.30.710.10
InterPro:IPR011333 SUPFAM:SSF54695 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0006511 PROSITE:PS00625
PROSITE:PS00626 PROSITE:PS50012 GO:GO:0000151 eggNOG:COG5184
PIR:T41321 RefSeq:NP_587711.1 ProteinModelPortal:O74881
IntAct:O74881 STRING:O74881 EnsemblFungi:SPCC330.11.1
GeneID:2538714 KEGG:spo:SPCC330.11 OMA:STSELCT OrthoDB:EOG42VCR5
NextBio:20799899 Uniprot:O74881
Length = 1347
Score = 137 (53.3 bits), Expect = 2.3e-05, P = 2.3e-05
Identities = 57/203 (28%), Positives = 90/203 (44%)
Query: 227 LEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLG--HCSLQSGDK-ELLPRRVVALDGI 283
+ K+ Q+S HS A+++ G +Y+WG G+LG + L+ D ++ PRR+ A
Sbjct: 246 IHKVIQISVSHTHSLALTKFGSIYSWGKNGSGELGLSNDELKKDDPIQITPRRISAFKDY 305
Query: 284 FIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVV 343
I +A G +S A T +Y+WG + GQLG+ S++ R + L+
Sbjct: 306 QIIGMAAGKSYSVAWTDTD-IYSWGLNN-GQLGISDH---ISVVSTP-----RRVAGLLS 355
Query: 344 PNGVQLVACGHSHTLVYMRDGRIHGW-GYNSYGQAANEK--STYAWYPSPVDWCVGEVRK 400
P V C T+ +++ I + YN N S+ P+ VRK
Sbjct: 356 P--VIHAVCTTRATICLLQNNSIIAFCNYNQVKLPFNVDFGSSLKVTKHPLSLTRFNVRK 413
Query: 401 LAAGGGHSAVLADACSLKELCEF 423
L A AVL + L E+ EF
Sbjct: 414 LLASENKLAVLTE---LGEVYEF 433
Score = 124 (48.7 bits), Expect = 0.00058, P = 0.00058
Identities = 42/157 (26%), Positives = 77/157 (49%)
Query: 228 EKITQVSCGEYHSAAVSE--NGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFI 285
+KI V ++HS +++ + VY G+G+ G++G + D + + + GI
Sbjct: 195 DKILDVQASKFHSVVLTDEPSQNVYVCGIGAGGRIGF----NTDVQY---NFIPIPGIIH 247
Query: 286 K--DVACGGVHSCALTSKGALYAWGGSQAGQLGLG----PQTRSFSLIPNESDTYFRNIP 339
K ++ HS ALT G++Y+WG + +G+LGL + + P F++
Sbjct: 248 KVIQISVSHTHSLALTKFGSIYSWGKNGSGELGLSNDELKKDDPIQITPRRISA-FKDYQ 306
Query: 340 ILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQ 376
I+ G+ A G S+++ + D I+ WG N+ GQ
Sbjct: 307 II----GM---AAGKSYSVAWT-DTDIYSWGLNN-GQ 334
>UNIPROTKB|G4N5N9 [details] [associations]
symbol:MGG_05277 "Alpha-tubulin suppressor protein Aats1"
species:242507 "Magnaporthe oryzae 70-15" [GO:0003674
"molecular_function" evidence=ND] INTERPRO:IPR000408 Pfam:PF00415
EMBL:CM001233 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 KO:K15462
RefSeq:XP_003712836.1 EnsemblFungi:MGG_05277T0 GeneID:2675298
KEGG:mgr:MGG_05277 Uniprot:G4N5N9
Length = 382
Score = 130 (50.8 bits), Expect = 2.3e-05, P = 2.3e-05
Identities = 50/178 (28%), Positives = 78/178 (43%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+Y +G G+ G+ G +R+P P F P + + ++ H AV S+G
Sbjct: 136 VYSFGCGSKGELGQ-G-PLIIRVPFAQPIANFPPP---ETEVVGLSACMGHVVAVLSNGD 190
Query: 83 LFTWGANEFGQLGDGTEEGR-KHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIST 141
++ WG GQLG EG P K++ + + K+ +CG T + EP G I
Sbjct: 191 VYGWGNGRKGQLG--APEGIITEPRKIEGVPFKVAKA-ACGKEFTCLVGEP--GSGDILV 245
Query: 142 SRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQL 199
L W S+ P P Q S G+++V L G + +WG N++GQL
Sbjct: 246 MGLDKWSVQ--SSAPNS-----VPGWRDLQASWGNIYV--LQADGSILSWGRNDHGQL 294
>SGD|S000004067 [details] [associations]
symbol:FMP25 "Protein required for assembly of respiratory
complex III" species:4932 "Saccharomyces cerevisiae" [GO:0005739
"mitochondrion" evidence=IEA;IDA] [GO:0003674 "molecular_function"
evidence=ND] [GO:0031966 "mitochondrial membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0034551
"mitochondrial respiratory chain complex III assembly"
evidence=IMP] [GO:0031305 "integral to mitochondrial inner
membrane" evidence=IDA] [GO:0016020 "membrane" evidence=IEA]
SGD:S000004067 INTERPRO:IPR000408 Pfam:PF00415 EMBL:BK006945
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0031305
EMBL:U53880 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
eggNOG:COG5184 GO:GO:0034551 EMBL:Z73250 EMBL:Z73249 EMBL:AY723844
PIR:S64909 RefSeq:NP_013178.1 ProteinModelPortal:Q08023 SMR:Q08023
DIP:DIP-4474N IntAct:Q08023 MINT:MINT-504101 STRING:Q08023
PaxDb:Q08023 PeptideAtlas:Q08023 EnsemblFungi:YLR077W GeneID:850766
KEGG:sce:YLR077W CYGD:YLR077w HOGENOM:HOG000111193 OMA:KLIEPED
OrthoDB:EOG4ZCXDB NextBio:966924 Genevestigator:Q08023
GermOnline:YLR077W Uniprot:Q08023
Length = 583
Score = 137 (53.3 bits), Expect = 4.3e-05, Sum P(2) = 4.3e-05
Identities = 45/166 (27%), Positives = 83/166 (50%)
Query: 169 ICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGIT--CEGLQGPRVIKGYAKFLDEAPE 226
I +++CGS H +A+ + G + A+G+N +GQL I+ E + PR + +A F P
Sbjct: 374 IKKIACGSYHTLAIDKTGEIYAFGWNRFGQLALPISYNLEYVSFPRSVT-HA-FKPHFPG 431
Query: 227 LE--KITQVSCGEYHS-AAVSENGEV-----YTWGLGSVGQLGHCSLQSGDKELLPRRVV 278
+ K + C + S + + G + +G G G+LG+ + ++ + P ++
Sbjct: 432 MTNWKCVDIHCDDETSFVTIRKPGSTSDHHYFAFGNGLFGELGNNTFKNSQCD--PIKIK 489
Query: 279 ALDGIFIKDVACGGVHSCALTS---KGALYAWGGSQAGQLGLGPQT 321
+ D + + +CG H C T + + AWG + GQLG+G +T
Sbjct: 490 S-DDKKLTNWSCGS-H-CVFTETEQENEVIAWGNNDHGQLGIGKKT 532
Score = 37 (18.1 bits), Expect = 4.3e-05, Sum P(2) = 4.3e-05
Identities = 5/9 (55%), Positives = 7/9 (77%)
Query: 23 IYVWGYNHS 31
+Y+WG HS
Sbjct: 162 VYIWGRCHS 170
>UNIPROTKB|H0YD20 [details] [associations]
symbol:SERGEF "Secretion-regulating guanine nucleotide
exchange factor" species:9606 "Homo sapiens" [GO:0050709 "negative
regulation of protein secretion" evidence=IEA] InterPro:IPR027048
INTERPRO:IPR000408 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PROSITE:PS50012 PANTHER:PTHR22870:SF7
HGNC:HGNC:17499 EMBL:AC055860 EMBL:AC124058 EMBL:AC124078
Ensembl:ENST00000532546 Bgee:H0YD20 Uniprot:H0YD20
Length = 126
Score = 94 (38.1 bits), Expect = 0.00084, P = 0.00084
Identities = 25/80 (31%), Positives = 39/80 (48%)
Query: 274 PRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDT 333
P RV L+ V G HS +LT G +Y WG ++ GQL +F +P + +
Sbjct: 19 PSRVTGLENSKAMCVLAGSDHSASLTDAGEVYVWGSNKHGQLA---NEAAFLPVPQKIEA 75
Query: 334 Y-FRNIPILVVPNG-VQLVA 351
+ F+N + + +G LVA
Sbjct: 76 HCFQNEKVTAIWSGWTHLVA 95
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.317 0.135 0.430 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 477 477 0.00079 119 3 11 22 0.42 34
35 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 227
No. of states in DFA: 623 (66 KB)
Total size of DFA: 318 KB (2160 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 37.73u 0.10s 37.83t Elapsed: 00:00:02
Total cpu time: 37.99u 0.10s 38.09t Elapsed: 00:00:02
Start: Sat May 11 14:16:44 2013 End: Sat May 11 14:16:46 2013
WARNINGS ISSUED: 1